BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040027
         (595 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 290/552 (52%), Positives = 373/552 (67%), Gaps = 10/552 (1%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY------DTRLNATGLFPNLYT 98
           I  +EAF +F++++ M P+PP +SSFN LL ++AK K Y        R++  GL P+  T
Sbjct: 71  IKRSEAFSVFNHLIDMQPTPP-ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFIT 129

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            NILINC+C + +V  G    G +LR   +PN  TF SL+KGL   SRI EA  L  K+ 
Sbjct: 130 LNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMV 189

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  PNV+TY TL+NGLC TG+TM+A+ L EEM NGNG  GV  KPN V Y TIID LC
Sbjct: 190 RMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLC 249

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+G +DK K LFL+MK   I+PDVV Y+S+IHG+CH   W  AK LF EM+D+GV P+VV
Sbjct: 250 KDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVV 309

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFNV++D LCK  KM+EA+ LL LM+QRG  P+  TYNTL+DGFCL G+I+ A +LF SM
Sbjct: 310 TFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM 369

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           ES G + D VSYN+LINGYCK+  + EA  LYREM+ K I PTV+TYNTL  GLF   +V
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A  LF EM+   +  ++ TY   +DGLCKN ++ EA+ELF  L     +  IQ +NCL
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDGLCK+ +++ A ELF  L H  L PNV+TY +MI GLC  GQ++ A+DLFL MEE   
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI---SLK 575
           AP+++TF+ L+ GF + +E  KV ELL +M EK   PDAS +SIVVDLL K+E     L 
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLH 609

Query: 576 SLPSFLVQERQG 587
            LP+F  Q + G
Sbjct: 610 LLPTFPAQGQTG 621


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 282/564 (50%), Positives = 370/564 (65%), Gaps = 10/564 (1%)

Query: 31  HFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------ 84
           H   L  R      IT  +AF  FD M+R HP PP +SSFN LL  LAK  HY       
Sbjct: 56  HPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLY 114

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
             +   GL P+L+T +IL NC C + RVS    A   ILR  + PN  T+ +LIKGL  E
Sbjct: 115 NEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCME 174

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            RI EA  LF +++  GC PN +TY TLI GLC+TG+  IAL L +EM N   + GV CK
Sbjct: 175 HRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCK 234

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  +TYS IIDGLCK G  D+AK LF +MK + + PDV++Y++LIHG C A  W+++K L
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL 294

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F EM+DQGVQP +VTF+V++D LCK  K+ EA +LL++M+QRG+ PN  TYN+L+DGFC+
Sbjct: 295 FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCM 354

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G +N A ELF SM S G + D++SY  LINGYCK  +V+EA++LY EM+  G  P V T
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  GLF+  +V  A KLF  M+  GV+A+++ Y  F+DGLCKN  + EA+ELF  L+
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               +L+I+ Y+CLIDGLCK+G+L+ AWELF  L    L P+VVTYNIMI G C  GQ+D
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  LF  MEEN   PD+I ++ L+ GF   N+  +V +LLHKM +K V P+A+  +IVV
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594

Query: 565 DLLVKNEISLKS---LPSFLVQER 585
           D+L K+E   K    LP F VQ  
Sbjct: 595 DMLCKDEKYKKFVDLLPKFPVQRH 618


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 275/580 (47%), Positives = 374/580 (64%), Gaps = 19/580 (3%)

Query: 23  SNFSSLLVHFRDLTT---------REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL 73
           SN SSL  H   + +         R      +T   A   F  M+R  P+P  +SSFN L
Sbjct: 17  SNLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPS-LSSFNHL 75

Query: 74  LASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
           L+ LAK KHY        ++  +GL  +  T NIL+NC C + R+  GF AF  ILR  +
Sbjct: 76  LSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGY 135

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +PN  T+N+LIKGL  E RI EA  LF +++  GC P+V+TY TLI GLC TG+  IAL 
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L +EM N      + CKPN +TY+ I+DGLCK G  D+AK LF +MK + + P +++YNS
Sbjct: 196 LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNS 255

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LIHG C A  W E+KRL  EM+DQG+QP +VTFNV++D LCK  K+ EA +LL +M++ G
Sbjct: 256 LIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 315

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + P+  TYN+L++GFC++G +N A ELF SM S GC+ D +SYN+LINGY K  +VEEA+
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            LY EM+  G +P V+TY++L  G+F   +V+ A KLF  M+  G+A ++ TY  F+DGL
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 435

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CKN  + EA++LF  L+    +L+I+  NCLIDGLCK+G+L+ AWELF  L +    PNV
Sbjct: 436 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 495

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTY IMI G C +GQ+DKA  L   ME N   PD+IT++ L+ GF   N+  +V +LLH+
Sbjct: 496 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 555

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEI---SLKSLPSFLVQE 584
           M +K V PDA   SIVVD+L K+E     L  LP F +Q+
Sbjct: 556 MAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/568 (47%), Positives = 369/568 (64%), Gaps = 26/568 (4%)

Query: 29  LVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY----- 83
           L  F ++  + GD    T +EA   F+ M+ M  +P  +S FN L  +LAK K Y     
Sbjct: 73  LEQFLEINCKSGDF---TLHEALHFFNQMIHMQTTPA-LSRFNNLFGALAKKKQYLHVIS 128

Query: 84  -DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
              R+N+ GL  N  + NIL+NC C + RV  GF+ FG ILR  + PN  TF +L+KGL 
Sbjct: 129 MCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLC 188

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            E +I EA  +F  +  F C P+ IT   LI+GLCRTG+T  AL L E M NGN + G+ 
Sbjct: 189 LEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGIN 248

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           CKP  V+YS IID LCK+G V++AK  F++MK++ I P+VVTY SL+HGLC A++W EAK
Sbjct: 249 CKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAK 308

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           RLFIEM+D G+ P VVTF+V++  LCK  K+ EAS L DLMVQR V P+  TYN L++G+
Sbjct: 309 RLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGY 368

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           CL G ++  +++F SM +  C+HD  SY+IL+  YCK+ EV  A+ LYREM+ +GI+PTV
Sbjct: 369 CLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTV 428

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT---TFIDGLCKNGYIIEAVEL 439
           +TY+          +V  A KLF E+Q   +  D+ +Y+    ++DGLCKNG + EA+++
Sbjct: 429 ITYS----------KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDV 478

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  L   K   ++  +N LI+G+C+S +L+ AWELF  L +  L P+VVTY IMI GLC 
Sbjct: 479 FYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCK 538

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            GQ  KA DLFL+MEE   AP+V+TF+ L+ G    +E  K+ ELLHKM  +K+ PDAS 
Sbjct: 539 VGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDAST 598

Query: 560 VSIVVDLLVKNE---ISLKSLPSFLVQE 584
           + IV+D+L+K+E     L  LP+F VQE
Sbjct: 599 LLIVMDILLKDENYHECLNLLPTFPVQE 626


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/522 (49%), Positives = 340/522 (65%), Gaps = 7/522 (1%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYT 98
           IT  +AF  F  M+  +P+PP +SSF  LL+ LAK KHY        ++  +G+ P+  T
Sbjct: 75  ITATQAFQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCT 133

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            NIL+NC C + RV  G      ILR  + P+  T+ +LIKGL  E RI +AA LFT+++
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC PN ITY TL+ GLCRTG+  IAL L +EM N +   G+  KP  ++YS IID LC
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+   D+A+ LF +MK + + P V++Y SLIHG C    W EAKRLF EM++QGVQP+VV
Sbjct: 254 KDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVV 313

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFNV++D LCK  K+ EA  LL++M+QRG+ PN  TYN+L++GFCL+G +N A ELF SM
Sbjct: 314 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 373

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S GC+ D + Y +LINGYCK  +VEEA+ LY  M+  G +P V TY  L  GLF+  +V
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 433

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A KLF  M+  G+  D   Y  F++GLCKNG + EA+ELF  L+    +LDI+ +NCL
Sbjct: 434 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDGLCK+G+L+ AWELF  LP   L P+VVTYNIMI   C  GQ+ KA  LF  ME+N  
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            PD IT+  LI GF    +  KV ELLH M ++ V  D +I+
Sbjct: 554 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 595



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 248/489 (50%), Gaps = 14/489 (2%)

Query: 107 CKIGRVSL--GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           CK G ++    F  F  ++ S  TP  ++F  L+ GL       +   L+ +++  G  P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +  T N L+N LC        L +   +    G I     P+ VTY+T+I GLC E  + 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILR-RGYI-----PDIVTYTTLIKGLCMEHRIS 183

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG------VQPSVV 278
           KA  LF +M+     P+ +TY +L+ GLC   + + A +L  EM++         +P V+
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           ++++I+D LCK+R+ DEA  L + M  +G+ P   +Y +L+ GFC  GK   A+ LF  M
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            + G + + V++N+LI+  CK  +V EA  L   M+ +GI P ++TYN+L  G   +  +
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A +LF  M   G   D   YT  I+G CK   + EA++L+  +  +    D++ Y  L
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           + GL + G++  A +LF  +    +  ++  Y I + GLC +G + +A +LF  ++    
Sbjct: 424 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
             D+  F+ LI G  +  +     EL  K+ ++++ PD    +I++    +    +K+  
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543

Query: 579 SFLVQERQG 587
            F   E+ G
Sbjct: 544 LFQKMEKNG 552


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/522 (48%), Positives = 337/522 (64%), Gaps = 15/522 (2%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYT 98
           IT  +AF  F  M+  +P+PP +SSF  LL+ LAK KHY        ++  +G+ P+  T
Sbjct: 75  ITAIQAFQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCT 133

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            NIL+NC C + RV  G      ILR  + P+  T+ +LIKGL  E RI +AA LFT+++
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC PN ITY TL+ GLCRTG+  IAL L +EM N +   G+  KP  ++YS IID LC
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+   D+A+ LF +MK + + P V++Y SL+        W EAKRLF EM++QGVQP+VV
Sbjct: 254 KDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVV 305

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFNV++D LCK  K+ EA  LL++M+QRG+ PN  TYN+L++GFCL+G +N A ELF SM
Sbjct: 306 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S GC+ D + Y +LINGYCK  +VEEA+ LY  M+  G +P V TY  L  GLF+  +V
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A KLF  M+  G+  D   Y  F++GLCKNG + EA+ELF  L+    +LDI+ +NCL
Sbjct: 426 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 485

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDGLCK+G+L+ AWELF  LP   L P+VVTYNIMI   C  GQ+ KA  LF  ME+N  
Sbjct: 486 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 545

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            PD IT+  LI GF    +  KV ELLH M ++ V  D +I+
Sbjct: 546 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 587



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 244/489 (49%), Gaps = 22/489 (4%)

Query: 107 CKIGRVSL--GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           CK G ++    F  F  ++ S  TP  ++F  L+ GL       +   L+ +++  G  P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +  T N L+N LC          + E +A   G +     P+ VTY+T+I GLC E  + 
Sbjct: 130 DCCTLNILLNCLCNVNR------VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG------VQPSVV 278
           KA  LF +M+     P+ +TY +L+ GLC   + + A +L  EM++         +P V+
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           ++++I+D LCK+R+ DEA  L + M  +G+ P   +Y +LM           A+ LF  M
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEM 295

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            + G + + V++N+LI+  CK  +V EA  L   M+ +GI P ++TYN+L  G   +  +
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A +LF  M   G   D   YT  I+G CK   + EA++L+  +  +    D++ Y  L
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 415

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           + GL + G++  A +LF  +    +  ++  Y I + GLC +G + +A +LF  ++    
Sbjct: 416 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 475

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
             D+  F+ LI G  +  +     EL  K+ ++++ PD    +I++    +    +K+  
Sbjct: 476 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535

Query: 579 SFLVQERQG 587
            F   E+ G
Sbjct: 536 LFQKMEKNG 544


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/571 (39%), Positives = 334/571 (58%), Gaps = 28/571 (4%)

Query: 15  SAPISAFRS---NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN 71
           S P+  F S   NF S  +HF  L            ++A   F+ +L MHP PP +  F 
Sbjct: 14  SPPLPFFSSSQNNFHSKSLHFNTL------------DDALSSFNRLLHMHP-PPSIVDFA 60

Query: 72  ILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
            LL S+AK KHY T      ++++ G+ PN+YT NILIN FC + RV   F    +IL+ 
Sbjct: 61  KLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKL 120

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
              P+  TF +LI+GL  E +I EA  LF K+   G +PNV+TY TLINGLC+ G+T  A
Sbjct: 121 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 180

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           + L   M  GN      C+P+ V Y++IID LCK+  V +A  LF QM  + I+PD+ TY
Sbjct: 181 IRLLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 234

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            SL+H LC+  +W     L  +M++  + P VV F+ ++D LCK  K+ EA  ++D+M+Q
Sbjct: 235 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 294

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RGV P+  TY TLMDG CL  +++ A ++F  M   G   D +SY  LINGYCK  ++++
Sbjct: 295 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 354

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+ L+ EM  K   P   TYNTL  GL  + +++ A+ LF EM   G   D  TY+  +D
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 414

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LCKN ++ EA+ L + +       DIQ YN +IDG+C++G L+ A +LF +L    L P
Sbjct: 415 SLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 474

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +V TYNIMI GLC  G +++A  LF++M+ N  +PD  T++ +  GF++ NE  +  +LL
Sbjct: 475 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLL 534

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
            +M  +    D S  +++V++L  + +   S
Sbjct: 535 EEMLARGFSADVSTTTLLVEMLSDDGLDQSS 565


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/568 (40%), Positives = 336/568 (59%), Gaps = 18/568 (3%)

Query: 27  SLLVHFRDLTT---REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
           SLL HF  L+        ++  T + A   F+ MLRM P PP    FN LL S+AK KH+
Sbjct: 19  SLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHH 77

Query: 84  DT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            T      ++++ G+ PN+YT +ILIN FC + RV   F    +IL+    P+ ATF +L
Sbjct: 78  STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL 137

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           I+G++ E +I EA  LF K+   G  P+V+TY TLINGLC+ G+T  A+ L   M   N 
Sbjct: 138 IRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN- 196

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                C+PN   Y+TIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +
Sbjct: 197 -----CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           W     L  EM+D  + P VV+FN ++D LCK  K+ EA  ++D M+QRGV PN  TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           LMDG CL+ +++ A ++F +M   GC  + +SYN LINGYCK + +++A+ L+ EM  + 
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           + P  VTY+TL  GL  + +++ A+ LF EM       +  TY   +D LCKN Y+ EA+
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 431

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            L + +     + DIQ  N  IDG+C++G L+ A +LF +L    L P+V TY+IMI GL
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G +D+A  LF +M+EN    +   ++ +  GF+R NE S+  +LL +M  +    DA
Sbjct: 492 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 551

Query: 558 SIVSIVVDLLVKNEI--SLKSLPSFLVQ 583
           S +++ V +L  + +  SLK +    VQ
Sbjct: 552 STMTLFVKMLSDDGLDQSLKQILREFVQ 579


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/556 (40%), Positives = 327/556 (58%), Gaps = 25/556 (4%)

Query: 18  ISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL 77
           +S+  + F S  +HF  L            +EA   F+ ML   P PP    FN LL S+
Sbjct: 34  LSSSHNTFHSKPLHFNTL------------DEALSTFNRMLHKQP-PPSTVDFNRLLTSI 80

Query: 78  AKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           AK KH+ T      ++++ G+ P++YT  I+IN  C + RV   F A  +IL+    P+A
Sbjct: 81  AKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDA 140

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            TF +LI+GL  E +I EA  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M  GN      C+PN V +ST+ID LCK+  V +A  +F +M  + I+P++VTYNSLIHG
Sbjct: 201 MEQGN------CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 254

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC   +W     L  EM+D  + P V T N ++D LCK   + EA  ++D+M+ RGV PN
Sbjct: 255 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 314

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TYN LMDG CL  +++ A ++F +M    C  + +SYN LINGYCK + V++A+ L+ 
Sbjct: 315 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 374

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           EM  + + P  VTYNTL  GL  + +++ A+ LF EM   G   D  TY T  D LCKN 
Sbjct: 375 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 434

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           ++ +A+ L + +     + DIQ Y  ++DG+C++G L+ A +LF +L    L PNV TYN
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 494

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           IMI GLC  G + +A  LF +M +N  +P+  T++++  GF+R NE  +  ELL +M  +
Sbjct: 495 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554

Query: 552 KVMPDASIVSIVVDLL 567
               D S  +++V +L
Sbjct: 555 GFSVDVSTTTLLVGML 570



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 191/367 (52%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+TV ++ ++  + K        +L  QM    I PDV T   +I+ LCH N  + A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP   TF  ++  LC   K+ EA  L D M+  G +PN  TY TL++G C 
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G  + A  L  SME   C+ + V ++ LI+  CK+++V EA +++ EM++KGI P +VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L  GL ++ + +H   L +EM    +  D  T  T +D LCK G + EA ++   + 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               E ++  YN L+DG C    +  A ++F ++ H   V NV++YN +I G C    +D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KA  LF +M      P+ +T++ LIHG   +        L H+M  +  +PD      + 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 565 DLLVKNE 571
           D L KN 
Sbjct: 428 DYLCKNR 434



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/373 (33%), Positives = 194/373 (52%), Gaps = 12/373 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  F+ L+ SL K++      N        G+ PN+ TYN LI+  CK+         
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ S   P+  T N+++  L  E  + EA  +   +   G EPNV+TYN L++G C 
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +A+ +F+ M + +      C  N ++Y+T+I+G CK   VDKA  LF +M  + +
Sbjct: 328 RNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 381

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VTYN+LIHGLCH     +A  LF EM+ +G  P +VT+  + D LCKNR +D+A  
Sbjct: 382 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  +      P+   Y T++DG C  G++  A +LF ++ S G + +  +YNI+I+G C
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   + EA  L+ EM   G  P   TYN +  G    ++    ++L +EM   G + D  
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 561

Query: 419 TYTTFIDGLCKNG 431
           T T  +  L  +G
Sbjct: 562 TTTLLVGMLSDDG 574



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 211/451 (46%), Gaps = 43/451 (9%)

Query: 65  PPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  ++F  L+  L       +  H   ++   G  PN+ TY  LIN  CK+G  S     
Sbjct: 138 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI-- 195

Query: 119 FGRILRSC----FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
             R+LRS       PN   F++LI  L  + ++ EA  +F+++   G  PN++TYN+LI+
Sbjct: 196 --RLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253

Query: 175 GLCRTGHTMIALNLFEEMANG---------NGEIGVVCK--------------------P 205
           GLC+         L  EM +          N  +  +CK                    P
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N VTY+ ++DG C    VD A  +F  M  ++   +V++YN+LI+G C     ++A  LF
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  Q + P+ VT+N ++  LC   ++ +A  L   MV RG  P+  TY TL D  C  
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
             +++A  L  ++E      D   Y  +++G C+  E+E+A  L+  + SKG++P V TY
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  GL +   +  A KLF EM ++G + +  TY     G  +N   +  +EL   +  
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
               +D+     L+  L   G  +   ++ C
Sbjct: 554 RGFSVDVSTTTLLVGMLSDDGLDQSVKQILC 584


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/556 (40%), Positives = 327/556 (58%), Gaps = 25/556 (4%)

Query: 18  ISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL 77
           +S+  + F S  +HF  L            +EA   F+ ML   P PP    FN LL S+
Sbjct: 34  LSSSHNTFHSKPLHFNTL------------DEALSTFNRMLHKQP-PPSTVDFNRLLTSI 80

Query: 78  AKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           AK KH+ T      ++++ G+ P++YT  I+IN  C + RV   F A  +IL+    P+A
Sbjct: 81  AKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDA 140

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            TF +LI+GL  E +I EA  LF K+   G +PNV+TY TLINGLC+ G+T  A+ L   
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M  GN      C+PN V +ST+ID LCK+  V +A  +F +M  + I+P++VTYNSLIHG
Sbjct: 201 MEQGN------CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 254

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC   +W     L  EM+D  + P V T N ++D LCK   + EA  ++D+M+ RGV PN
Sbjct: 255 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 314

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TYN LMDG CL  +++ A ++F +M    C  + +SYN LINGYCK + V++A+ L+ 
Sbjct: 315 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 374

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           EM  + + P  VTYNTL  GL  + +++ A+ LF EM   G   D  TY T  D LCKN 
Sbjct: 375 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 434

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           ++ +A+ L + +     + DIQ Y  ++DG+C++G L+ A +LF +L    L PNV TYN
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 494

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           IMI GLC  G + +A  LF +M +N  +P+  T++++  GF+R NE  +  ELL +M  +
Sbjct: 495 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554

Query: 552 KVMPDASIVSIVVDLL 567
               D S  +++V +L
Sbjct: 555 GFSVDVSTTTLLVGML 570


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/556 (40%), Positives = 332/556 (59%), Gaps = 15/556 (2%)

Query: 36  TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNA 89
           T     +N  T ++A   F+ ML MHP PP ++ F  LL S+ K KHY T      ++++
Sbjct: 38  TFHSKSLNFNTLDDALSSFNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDS 96

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            G+ PN+YT NILIN FC + R+   F    +IL+    PN ATFN+LI+GL  E +I E
Sbjct: 97  FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 156

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
              LF K+   G +PNV+TY TLINGLC+ G T  A+ L   M  GN      C+P+ V 
Sbjct: 157 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVV 210

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y++IID LCK+  V +A  LF +M  + I+P + TYNSLIH LC+  +W     L  EM+
Sbjct: 211 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 270

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +  + P+VV F+ ++D LCK  K+ EA  ++D+M++RGV PN  TYN LMDG CL  +++
Sbjct: 271 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 330

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A ++F +M   G   D VSY+ LINGYCK + +E+A+ L+ EM  K + P  VTY+TL 
Sbjct: 331 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 390

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL  + +++ A+ LF EM   G   D  +Y   +D LCKN  + EA+ L + +     +
Sbjct: 391 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 450

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DIQ Y  +IDG+C++G L+ A +LF +L    L PNV TY IMI GLC  G + +A  L
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M+    +P+  T++++  GF+R NE  +  +LL +M  +    D S  +++V++L  
Sbjct: 511 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 570

Query: 570 NEI--SLKSLPSFLVQ 583
           + +  S+K + S  +Q
Sbjct: 571 DGLDQSVKQILSEFLQ 586



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 238/470 (50%), Gaps = 6/470 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P+ A F  L+  +          +L  ++ +FG  PN+ T N LIN  C
Sbjct: 55  SFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFC 114

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  A ++  ++      + +  +PN  T++T+I GLC EG + +   LF +M  E 
Sbjct: 115 HLQRLGFAFSVLAKI------LKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+VVTY +LI+GLC     + A RL   M     QP VV +  I+D LCK+R++ +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M+ +G+ P+  TYN+L+   C + +      L   M +     + V ++ +++  
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +V EA  +   M+ +G++P VVTYN L  G     +++ A+K+FD M   G A D 
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y+T I+G CK   I +A+ LF  +   +   +   Y+ L+ GLC  GRL+ A  LF  
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P+ V+Y I++  LC + ++D+A  L   +E +   PD+  + ++I G  R  E
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                +L   +  K + P+    +I+++ L +  +  ++   F   +R+G
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 88/204 (43%)

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           ++NT        + ++ AL  F+ M           +T  +  + K  +    + L   +
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  +I   N LI+  C   RL FA+ +   +      PN+ T+N +I+GLC +G++
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +   LF  M      P+V+T+  LI+G  ++   S    LL  M++    PD  + + +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 564 VDLLVKNEISLKSLPSFLVQERQG 587
           +D L K+    ++   F     QG
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQG 238


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/556 (40%), Positives = 332/556 (59%), Gaps = 15/556 (2%)

Query: 36  TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNA 89
           T     +N  T ++A   F+ ML MHP PP ++ F  LL S+ K KHY T      ++++
Sbjct: 29  TFHSKSLNFNTLDDALSSFNRMLHMHP-PPSIADFTKLLISITKMKHYSTVLSLSHQMDS 87

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            G+ PN+YT NILIN FC + R+   F    +IL+    PN ATFN+LI+GL  E +I E
Sbjct: 88  FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 147

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
              LF K+   G +PNV+TY TLINGLC+ G T  A+ L   M  GN      C+P+ V 
Sbjct: 148 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVV 201

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y++IID LCK+  V +A  LF +M  + I+P + TYNSLIH LC+  +W     L  EM+
Sbjct: 202 YTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV 261

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +  + P+VV F+ ++D LCK  K+ EA  ++D+M++RGV PN  TYN LMDG CL  +++
Sbjct: 262 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 321

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A ++F +M   G   D VSY+ LINGYCK + +E+A+ L+ EM  K + P  VTY+TL 
Sbjct: 322 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 381

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL  + +++ A+ LF EM   G   D  +Y   +D LCKN  + EA+ L + +     +
Sbjct: 382 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 441

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DIQ Y  +IDG+C++G L+ A +LF +L    L PNV TY IMI GLC  G + +A  L
Sbjct: 442 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M+    +P+  T++++  GF+R NE  +  +LL +M  +    D S  +++V++L  
Sbjct: 502 FGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSD 561

Query: 570 NEI--SLKSLPSFLVQ 583
           + +  S+K + S  +Q
Sbjct: 562 DGLDQSVKQILSEFLQ 577



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 238/470 (50%), Gaps = 6/470 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P+ A F  L+  +          +L  ++ +FG  PN+ T N LIN  C
Sbjct: 46  SFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFC 105

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  A ++  ++      + +  +PN  T++T+I GLC EG + +   LF +M  E 
Sbjct: 106 HLQRLGFAFSVLAKI------LKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+VVTY +LI+GLC     + A RL   M     QP VV +  I+D LCK+R++ +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M+ +G+ P+  TYN+L+   C + +      L   M +     + V ++ +++  
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +V EA  +   M+ +G++P VVTYN L  G     +++ A+K+FD M   G A D 
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y+T I+G CK   I +A+ LF  +   +   +   Y+ L+ GLC  GRL+ A  LF  
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P+ V+Y I++  LC + ++D+A  L   +E +   PD+  + ++I G  R  E
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                +L   +  K + P+    +I+++ L +  +  ++   F   +R+G
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 88/204 (43%)

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           ++NT        + ++ AL  F+ M           +T  +  + K  +    + L   +
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  +I   N LI+  C   RL FA+ +   +      PN+ T+N +I+GLC +G++
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +   LF  M      P+V+T+  LI+G  ++   S    LL  M++    PD  + + +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 564 VDLLVKNEISLKSLPSFLVQERQG 587
           +D L K+    ++   F     QG
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQG 229


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/596 (41%), Positives = 339/596 (56%), Gaps = 76/596 (12%)

Query: 23  SNFSSLLVHFRDLTT---------REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL 73
           SN SSL  H   + +         R      +T   A   F  M+R  P+P  +SSFN L
Sbjct: 17  SNLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPS-LSSFNHL 75

Query: 74  LASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
           L+ LAK KHY        ++  +GL  +  T NIL+NC C + R+  GF           
Sbjct: 76  LSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGF----------- 124

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
                                   A F  +   G  PN++TYNTLI GLC       A  
Sbjct: 125 ------------------------AAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR 160

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE------NINPD 241
           LF  M     ++G  C P+ VTY T+I GLC  G ++ A  L  +M ++      N  P+
Sbjct: 161 LFLRMQ----KLG--CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEM----------MDQGVQPSVVTFNVIMDELCKNR 291
           V+TYN ++ GLC     +EAK+LF EM          +DQG+QP +VTFNV++D LCK  
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+ EA +LL +M++ G+ P+  TYN+L++GFC++G +N A ELF SM S GC+ D +SYN
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           +LINGY K  +VEEA+ LY EM+  G +P V+TY++L  G+F   +V+ A KLF  M+  
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+A ++ TY  F+DGLCKN  + EA++LF  L+    +L+I+  NCLIDGLCK+G+L+ A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           WELF  L +    PNVVTY IMI G C +GQ+DKA  L   ME N   PD+IT++ L+ G
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI---SLKSLPSFLVQE 584
           F   N+  +V +LLH+M +K V PDA   SIVVD+L K+E     L  LP F +Q+
Sbjct: 515 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 570


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/581 (39%), Positives = 341/581 (58%), Gaps = 19/581 (3%)

Query: 14  ASAPISAFRSNFSSLLVHFRDLTT---REGDINVITPNEAFCIFDYMLRMHPSPPPVSSF 70
           +S+P   F +   SL  +F  L+        +N  T ++A   F+ ML MHP PP    F
Sbjct: 13  SSSP-PGFGTCVLSLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHP-PPSTVDF 70

Query: 71  NILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           N LL S+AK K Y T      ++++ G+ P++YT NILIN FC + R    F    +IL+
Sbjct: 71  NRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILK 130

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P+ ATF +LI+GL  E +I +A  LF K+   G +PNV+TY TLINGLC+ G+T  
Sbjct: 131 LGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNA 190

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ L   M  GN      C+P+ V Y++IID LCK+  V +A  LF +M  + I+PD+ T
Sbjct: 191 AIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y SLIH LC+  +W     L  +M++  + P VV F+ ++D LCK  K+ EA  ++D+M+
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            RGV PN  TYN LMDG CL  +++ A ++F +M   G   + +SYN LINGYCK + ++
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L+ EM  K + P  VTYNTL  GL  + +++ A+ LF EM   G   D  TY   +
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D LCK  ++ EA+ L +T+     + DIQ Y  +IDG+C++G L+ A ++F +L    L 
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PNV TY IMI GLC  G +D+A  LF++M+ N  +PD  T++ +  G ++  E  +  +L
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQL 544

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEI--SLKSLPSFLVQ 583
           L +M  +    D S  +++V++L  +++  S+K + S  VQ
Sbjct: 545 LQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 251/518 (48%), Gaps = 31/518 (5%)

Query: 57  MLRMHPSPPP-----VSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           ML    S PP     V S     +SL+ N+ +   LN          +N L +       
Sbjct: 8   MLTRPSSSPPGFGTCVLSLPPYFSSLSHNRFHSKSLN----------FNTLDDALS---- 53

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
                 +F R+L     P+   FN L+  +    +     +L  ++ +FG  P+V T N 
Sbjct: 54  ------SFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LIN  C       A ++  ++     ++G+  +P+T T++T+I GLC EG +  A  LF 
Sbjct: 108 LINSFCHLNRPGFAFSVLAKIL----KLGL--QPDTATFTTLIRGLCVEGKIGDALHLFD 161

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M  E   P+VVTY +LI+GLC   + N A RL   M     QP VV +  I+D LCK+R
Sbjct: 162 KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR 221

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++ EA  L   MV +G+ P+  TY +L+   C + +      L   M +     D V ++
Sbjct: 222 QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 281

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +++  CK  ++ EA  +   M+ +G++P VVTYN L  G     +++ A+K+FD M  +
Sbjct: 282 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN 341

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G A +  +Y T I+G CK   + +A  LF  +   +   +   YN L+ GLC  GRL+ A
Sbjct: 342 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             LF  +     +P++ TY I++  LC    +D+A  L   +E +   PD+  + ++I G
Sbjct: 402 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 461

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             R  E     ++   +  K + P+    +I+++ L +
Sbjct: 462 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 499


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/559 (40%), Positives = 327/559 (58%), Gaps = 28/559 (5%)

Query: 15  SAPISAFRS---NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN 71
           S P+  F S   NF S  +HF  L            ++A   F+ +L MHP PP +  F 
Sbjct: 23  SPPLPFFSSSQNNFHSKSLHFNTL------------DDALSSFNRLLHMHP-PPSIVDFA 69

Query: 72  ILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
            LL S+AK KHY T      ++++ G+ PN+YT NILIN FC + RV   F    +IL+ 
Sbjct: 70  KLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKL 129

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
              P+  TF +LI+GL  E +I EA  LF K+   G +PNV+TY TLINGLC+ G+T  A
Sbjct: 130 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 189

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           + L   M  GN      C+P+ V Y++IID LCK+  V +A  LF QM  + I+PD+ TY
Sbjct: 190 IRLLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 243

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            SL+H LC+  +W     L  +M++  + P VV F+ ++D LCK  K+ EA  ++D+M+Q
Sbjct: 244 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 303

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RGV P+  TY TLMDG CL  +++ A ++F  M   G   D +SY  LINGYCK  ++++
Sbjct: 304 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 363

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+ L+ EM  K   P   TYNTL  GL  + +++ A+ LF EM   G   D  TY+  +D
Sbjct: 364 AMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 423

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LCKN ++ EA+ L + +       DIQ YN +IDG+C++G L+ A +LF +L    L P
Sbjct: 424 SLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 483

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +V TYNIMI GLC  G +++A  LF++M+ N  +PD  T++ +  GF++ NE  +  +LL
Sbjct: 484 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLL 543

Query: 546 HKMKEKKVMPDASIVSIVV 564
            +M  +    D+  + + V
Sbjct: 544 EEMLARGFSADSCFLMLSV 562



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 184/366 (50%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V ++ ++  + K        +L  QM    + P+V T N LI+  CH N    A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP   TF  ++  LC   K+ EA  L D M+  G +PN  TY TL++G C 
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G  + A  L  SME   C+ D V Y  +I+  CK+++V EA +L+ +MV +GI P + T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   L  + + +H   L ++M    +  D   ++T +D LCK G + EA E+   + 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               E D+  Y  L+DG C    +  A ++F  +      P+V++Y  +I G C   ++D
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KA  LF +M      PD  T++ L++G   +        L H+M  +  MPD    SI++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 565 DLLVKN 570
           D L KN
Sbjct: 423 DSLCKN 428



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 130/273 (47%)

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D+A    + ++     P+   +  L+     M   +    L   M+S G   +  + NI
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LIN +C    V  A S+  +++  G +P   T+ TL  GL    ++  AL LFD+M  +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +  TY T I+GLCK G    A+ L R++    C+ D+  Y  +ID LCK  ++  A+
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            LF  +    + P++ TY  ++  LCN  +      L   M  +   PDV+ F  ++   
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +  + ++ +E++  M ++ V PD    + ++D
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 318



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 35/242 (14%)

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +++ALS +  ++     P++V +  L   + ++      L L  +M   GV  +  T   
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I+  C    +  A  +   +  L  + D   +  LI GLC  G++  A  LF  +    
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 483 LVPNVVTYNIMIQG-----------------------------------LCNDGQMDKAR 507
             PNVVTY  +I G                                   LC D Q+ +A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +LF  M     +PD+ T+  L+H    + E   V  LL++M   K++PD  I S VVD L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 568 VK 569
            K
Sbjct: 286 CK 287


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/574 (36%), Positives = 330/574 (57%), Gaps = 26/574 (4%)

Query: 5   SCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           S C R FS  S     FR    S +V              I  ++A  +F  M+R  P P
Sbjct: 40  SSCERDFSSISNGNVCFRERLRSGIVD-------------IKKDDAIALFQEMIRSRPLP 86

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
             V  F+   +++A+ K ++       +L   G+  N+YT NI+INCFC+  +    +  
Sbjct: 87  SLVD-FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G++++  + P+  TFN+LIKGL  E ++ EA  L  ++   GC+P+V+TYN+++NG+CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G T +AL+L  +M   N       K +  TYSTIID LC++G +D A +LF +M+ + I
Sbjct: 206 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              VVTYNSL+ GLC A  WN+   L  +M+ + + P+V+TFNV++D   K  K+ EA+ 
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M+ RG+ PN  TYNTLMDG+C+  +++ A  +   M    C  D V++  LI GYC
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             K V++ + ++R +  +G+    VTY+ L  G  +  +++ A +LF EM   GV  D  
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +DGLC NG + +A+E+F  L+  K +L I  Y  +I+G+CK G+++ AW LFCSL
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
           P   + PNV+TY +MI GLC  G + +A  L   MEE+  AP+  T++ LI   +R  + 
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           +   +L+ +MK      DAS + +V+D+L+  E+
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLLSGEL 593



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 190/396 (47%), Gaps = 6/396 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ LF+EM            P+ V +S     + +    +       Q++   I  ++ T
Sbjct: 72  AIALFQEMIRSRP------LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            N +I+  C       A  +  ++M  G +P   TFN ++  L    K+ EA  L+D MV
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G +P+  TYN++++G C  G  + A +L   ME    K D  +Y+ +I+  C++  ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A+SL++EM +KGIK +VVTYN+L  GL +  +      L  +M    +  +  T+   +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D   K G + EA EL++ +       +I  YN L+DG C   RL  A  +   +      
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++VT+  +I+G C   ++D    +F ++ +     + +T+ +L+ GF +  +     EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +M    V+PD     I++D L  N    K+L  F
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 1/197 (0%)

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G+ +I + + A+ LF EM R         ++ F   + +       ++  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +I   N +I+  C+  +  FA+ +   +      P+  T+N +I+GL  +G++ +A  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M EN   PDV+T++ +++G  R  + S   +LL KM+E+ V  D    S ++D L ++
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 571 EISLKSLPSFLVQERQG 587
                ++  F   E +G
Sbjct: 242 GCIDAAISLFKEMETKG 258


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/528 (40%), Positives = 317/528 (60%), Gaps = 13/528 (2%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTY 99
           T ++A   F+ ML MHP PP    F  LL S+AK KHY T      ++++ G+ P++YT 
Sbjct: 130 TLDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           NILIN FC + R+   F    ++L+    P+  TFN+LI+GL  E +I EA  LF K   
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G +P+V+TY TL+NGLC+ G+T  A+ L   M   N      C+PN + Y+TIID LCK
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCK 302

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +  V +A  LF +M  + I+PD+ TYNSLIH LC+  +W     L  EM++  + P+VV 
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F+ ++D LCK   +  A  ++D+M++RGV P+  TY  LMDG CL  +++ A ++F +M 
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC  +  SYNILINGYC+ + +++A+ L  +M  +G+    VTYNTL  GL  + +++
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           HA+ LF EM   G   D  TY   +D LCKN ++ EA+ L + +     + DI  YN  I
Sbjct: 483 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 542

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DG+C++G L+ A +LF +L    L P+V TYNIMI GLC  G +D+A  LF  M+EN  +
Sbjct: 543 DGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCS 602

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            D   ++ +I GF+R NE     +LL +M  +    D S  +++V++L
Sbjct: 603 RDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 186/367 (50%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+TV ++ ++  + K        +L  QM    I PDV T N LI+  CH      A  +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP   TFN ++  LC   K+ EA  L D  +  G +P+  TY TLM+G C 
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G  + A  L  SM    C+ + ++YN +I+  CK+++V EA +L+ EM++KGI P + T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L   L  + + +H   L +EM    +  +   ++T +D LCK G I  A ++   + 
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               E D+  Y  L+DG C    +  A ++F ++ H   VPNV +YNI+I G C   +MD
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KA  L   M       D +T++ LIHG   +        L H+M     +PD     I++
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 565 DLLVKNE 571
           D L KN 
Sbjct: 508 DYLCKNH 514



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 149/312 (47%)

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
           H N  ++A   F  M+     PS V F  ++  + K +       L   M   G+ P+  
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 186

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T N L++ FC + ++  A  +   +  +GC+ D+ ++N LI G C   ++ EAL L+ + 
Sbjct: 187 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 246

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           + +G +P VVTY TL  GL ++     A++L   M +     +   Y T ID LCK+  +
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 306

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  LF  +       DI  YN LI  LC     K    L   + +  ++PNVV ++ +
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +  LC +G +  A D+   M +    PDV+T+  L+ G    +E  +  ++   M  K  
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426

Query: 554 MPDASIVSIVVD 565
           +P+    +I+++
Sbjct: 427 VPNVRSYNILIN 438



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ AL  F+ M        T  +T  +  + K  +    + L   +       D+   N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+  C   RL +A+ +   L      P+  T+N +I+GLC +G++ +A  LF       
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             PDV+T+  L++G  ++   S    LL  M +K   P+    + ++D L K+ 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDR 304


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/550 (39%), Positives = 329/550 (59%), Gaps = 16/550 (2%)

Query: 42  INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPN 95
           +N  T ++A   F+ ML MHP PP    FN LL S+AK K Y T      ++++ G+ P+
Sbjct: 45  LNFNTLDDALSSFNRMLHMHP-PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPD 103

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           +YT NILIN FC + R+   F    +IL+    P+ ATF +LI+GL  E +I +A  LF 
Sbjct: 104 VYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFD 163

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           K+   G +PNV+TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V Y++IID
Sbjct: 164 KMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVVVYTSIID 217

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            LCK+  V +A  LF +M  + I+PD+ TY SLIH LC+  +W     L  +M++  + P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            VV F+ ++D LCK  K+ EA  ++D+M+ RGV PN  TYN LMDG CL  +++ A ++F
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
            +M   G   + +SYN LINGYCK + +++A  L+ EM  K + P  VTYNTL +    +
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL-MHXCHV 396

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +++ A+ LF EM   G   D  TY   +D LCK  ++ EA+ L +T+     + DIQ Y
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             +IDG+C++G L+ A ++F +L    L PNV TY IMI GLC  G +D+A  LF++M+ 
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI--S 573
           N  +PD  T++ +  G ++  E  +  +LL +M  +    D S  +++V++L  +++  S
Sbjct: 517 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQS 576

Query: 574 LKSLPSFLVQ 583
           +K + S  VQ
Sbjct: 577 VKQILSEFVQ 586


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/570 (36%), Positives = 328/570 (57%), Gaps = 26/570 (4%)

Query: 5   SCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           S C R FS  S     FR    S +V              I  ++A  +F  M+R  P P
Sbjct: 40  SSCERDFSSISNGNVCFRERLRSGIVD-------------IKKDDAIALFQEMIRSRPLP 86

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
             V  F+   +++A+ K ++       +L   G+  N+YT NI+INCFC+  +    +  
Sbjct: 87  SLVD-FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G++++  + P+  TFN+LIKGL  E ++ EA  L  ++   GC+P+V+TYN+++NG+CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G T +AL+L  +M   N       K +  TYSTIID LC++G +D A +LF +M+ + I
Sbjct: 206 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              VVTYNSL+ GLC A  WN+   L  +M+ + + P+V+TFNV++D   K  K+ EA+ 
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M+ RG+ PN  TYNTLMDG+C+  +++ A  +   M    C  D V++  LI GYC
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             K V++ + ++R +  +G+    VTY+ L  G  +  +++ A +LF EM   GV  D  
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +DGLC NG + +A+E+F  L+  K +L I  Y  +I+G+CK G+++ AW LFCSL
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
           P   + PNV+TY +MI GLC  G + +A  L   MEE+  AP+  T++ LI   +R  + 
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +   +L+ +MK      DAS + +V+D+L+
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 1/197 (0%)

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G+ +I + + A+ LF EM R         ++ F   + +       ++  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +I   N +I+  C+  +  FA+ +   +      P+  T+N +I+GL  +G++ +A  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M EN   PDV+T++ +++G  R  + S   +LL KM+E+ V  D    S ++D L ++
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 571 EISLKSLPSFLVQERQG 587
                ++  F   E +G
Sbjct: 242 GCIDAAISLFKEMETKG 258


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/570 (36%), Positives = 328/570 (57%), Gaps = 26/570 (4%)

Query: 5   SCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           S C R FS  S     FR    S +V              I  ++A  +F  M+R  P P
Sbjct: 30  SSCERDFSSISNGNVCFRERLRSGIVD-------------IKKDDAIALFQEMIRSRPLP 76

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
             V  F+   +++A+ K ++       +L   G+  N+YT NI+INCFC+  +    +  
Sbjct: 77  SLVD-FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G++++  + P+  TFN+LIKGL  E ++ EA  L  ++   GC+P+V+TYN+++NG+CR
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G T +AL+L  +M   N       K +  TYSTIID LC++G +D A +LF +M+ + I
Sbjct: 196 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 249

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              VVTYNSL+ GLC A  WN+   L  +M+ + + P+V+TFNV++D   K  K+ EA+ 
Sbjct: 250 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M+ RG+ PN  TYNTLMDG+C+  +++ A  +   M    C  D V++  LI GYC
Sbjct: 310 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 369

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             K V++ + ++R +  +G+    VTY+ L  G  +  +++ A +LF EM   GV  D  
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +DGLC NG + +A+E+F  L+  K +L I  Y  +I+G+CK G+++ AW LFCSL
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
           P   + PNV+TY +MI GLC  G + +A  L   MEE+  AP+  T++ LI   +R  + 
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +   +L+ +MK      DAS + +V+D+L+
Sbjct: 550 TASAKLIEEMKSCGFSADASSIKMVIDMLL 579



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 131/559 (23%), Positives = 232/559 (41%), Gaps = 95/559 (16%)

Query: 2   GLESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPN------------- 48
           G++S      S       A + N  +LL   +D+ +RE   NVIT N             
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALL--LKDMVSREIVPNVITFNVLLDVFVKEGKLQ 305

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNIL 102
           EA  ++  M+    SP  ++ +N L+             N   L       P++ T+  L
Sbjct: 306 EANELYKEMITRGISPNIIT-YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 364

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  +C + RV  G   F  I +     NA T++ L++G     +I  A  LF ++ + G 
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV-------------------- 202
            P+V+TY  L++GLC  G    AL +FE++     ++G+V                    
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     KPN +TY+ +I GLCK+G + +A  L  +M+++   P+  TYN+LI    
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL-----------CKNRKMDEASRLLDL 302
              D   + +L  EM   G      +  +++D L           C ++       LL+L
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLEL 604

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL------ING 356
                +R ++ T+  +     +   +N       ++E+ G    +++ ++       +  
Sbjct: 605 SGSEKIRLSSLTFVKMFPCNTITTSLN-----VNTIEARGMNSAELNRDLRKLRRSSVLK 659

Query: 357 YCKNKEVEEALSLYREMVSKGIK------------PTVVTYNTLFLGLF----EIHQVEH 400
             KN++V   + +  E+++ G++            PT   +     G          V  
Sbjct: 660 KFKNRDVR--VLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVT 717

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A +L  EM + G+A +T TY++ IDG CK   + EA ++   L + K + DI+    L+ 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQML-DLMVTKGDSDIRY---LLA 773

Query: 461 GLCKSGRLKFAWELFCSLP 479
           GL +  R     E + +LP
Sbjct: 774 GLMRKKRKGSETEGWENLP 792



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 1/197 (0%)

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G+ +I + + A+ LF EM R         ++ F   + +       ++  + L +     
Sbjct: 53  GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 111

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +I   N +I+  C+  +  FA+ +   +      P+  T+N +I+GL  +G++ +A  L 
Sbjct: 112 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 171

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M EN   PDV+T++ +++G  R  + S   +LL KM+E+ V  D    S ++D L ++
Sbjct: 172 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 231

Query: 571 EISLKSLPSFLVQERQG 587
                ++  F   E +G
Sbjct: 232 GCIDAAISLFKEMETKG 248


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/536 (39%), Positives = 323/536 (60%), Gaps = 13/536 (2%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           N I+ ++A   F  M+RM+P P  V  F   L S+AK K Y +      +++  G+  N+
Sbjct: 73  NDISIDDALTSFYRMVRMNPRPS-VVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNV 131

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           Y+ N+LINC C++  V       G++ +    P+A TFN+LI GL  E +I EA  LF +
Sbjct: 132 YSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNE 191

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +   G EPNVI+YNT+INGLC+ G+T++A+ +F +M    G      KPN VTY+TIID 
Sbjct: 192 MVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG------KPNVVTYNTIIDS 245

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK+  V++A     +M D  I PDVVTYN+++HG C     NEA RLF EM+ + V P 
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            VTFN+++D LCK   + EA  + + M ++G  PNA TYN LMDG+CL  +++ A ++ G
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   GC  +  SYNILINGYCK+K + EA  L  EM  K + P  VTY+TL  GL ++ 
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +   AL LF EM   G+  D   Y+  +DG CK+G++ EA++L + +   + + +I  Y 
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI G+  +G+L+ A ELF  L    + P++ TYN+MI+GL  +G  D+A + F  ME++
Sbjct: 486 ILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDD 545

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
              PD  +++++I GF++  + S   +L+ +M  K+   D+S   +++DL   +EI
Sbjct: 546 GFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDEI 601



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 254/478 (53%), Gaps = 6/478 (1%)

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
              +F R++R    P+   F   +  +  + +   A +L  ++  FG   NV + N LIN
Sbjct: 80  ALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLIN 139

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            LCR  H   A+++  +M     ++G+  +P+ +T++T+I+GLC EG + +A  LF +M 
Sbjct: 140 CLCRLSHVDFAVSVMGKMF----KLGI--QPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                P+V++YN++I+GLC   +   A R+F +M     +P+VVT+N I+D LCK+R ++
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA   L  MV RG+ P+  TYNT++ GFC +G++N A  LF  M       D V++NIL+
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILV 313

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G CK   V EA  +   M  KG +P   TYN L  G    +Q++ A+K+   M   G A
Sbjct: 314 DGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCA 373

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  +Y   I+G CK+  + EA  L   +       D   Y+ L+ GLC+ GR + A  L
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNL 433

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    L+P+++ Y+I++ G C  G +D+A  L  +M E    P++I + +LI G   
Sbjct: 434 FKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFI 493

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
             +     EL  K+    + PD    ++++  L+K  +S ++   F   E  G + +S
Sbjct: 494 AGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDS 551


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/604 (38%), Positives = 333/604 (55%), Gaps = 70/604 (11%)

Query: 27  SLLVHFRDLTT---REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
           SLL HF  L+        ++  T + A   F+ MLRM P PP    FN LL S+AK KH+
Sbjct: 19  SLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHH 77

Query: 84  DT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            T      ++++ G+ PN+YT +ILIN FC + RV   F    +IL+    P+ ATF +L
Sbjct: 78  STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL 137

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           I+G+  E +I EA  LF K+   G  P+V+TY TLINGLC+ G+T  A+ L   M   N 
Sbjct: 138 IRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN- 196

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                C+PN   Y+TIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +
Sbjct: 197 -----CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           W     L  EM+D  + P VV+FN ++D LCK  K+ EA  ++D M+QRGV PN  TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE------------- 364
           LMDG CL+ +++ A ++F +M   GC  + +SYN LINGYCK + ++             
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC 371

Query: 365 ------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 EA+ ++  MV KG  P V++YNTL  G  +I +++ A+ LF EM R  +  DT 
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431

Query: 419 TYTTFIDG-----------------------------------LCKNGYIIEAVELFRTL 443
           TY+T I G                                   LCKN Y+ EA+ L + +
Sbjct: 432 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 491

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                + DIQ  N  IDG+C++G L+ A +LF +L    L P+V TY+IMI GLC  G +
Sbjct: 492 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLL 551

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A  LF +M+EN    +   ++ +  GF+R NE S+  +LL +M  +    DAS +++ 
Sbjct: 552 DEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLF 611

Query: 564 VDLL 567
           V +L
Sbjct: 612 VKML 615



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 214/402 (53%), Gaps = 20/402 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNIL---LASLAKNKHYDTRLNA---TGLFPNLYTYNIL 102
           EAF +F  M+    SP  + ++N L   L +L + KH  T LN    + + P++ ++N +
Sbjct: 219 EAFNLFSEMVTKGISPD-IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  CK G+V+       ++++    PN  T+ +L+ G    S + EA  +F  +   GC
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 163 EPNVITYNTLINGLCRTGHTMIA-------------LNLFEEMANGNGEIGVVCKPNTVT 209
            PNVI+YNTLING C+      A             LN+ E +   +  +   C PN ++
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVIS 397

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T+I+G CK   +DKA  LF +M  + + PD VTY++LIHGLCH     +A  LF EM+
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
                P++VT+ +++D LCKNR + EA  LL  +    + P+    N  +DG C  G++ 
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 517

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A +LF ++ S G + D  +Y+I+ING C+   ++EA  L+REM   G       YNT+ 
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 577

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            G    ++   A++L  EM   G +AD  T T F+  L  +G
Sbjct: 578 RGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/536 (40%), Positives = 325/536 (60%), Gaps = 13/536 (2%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           N I+ ++A   F  MLRM+P P  V  F   L S+AK K Y T      +++  G+  N+
Sbjct: 69  NSISIDDALASFYRMLRMNPRPS-VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNV 127

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           Y+ NILINC C++  V       G++ +    P+A TFN+LI G   E  I EA  LF +
Sbjct: 128 YSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNE 187

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +   G +P+VI+Y+T+INGLC++G+T +AL L  +M          CKPN V Y+TIID 
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG------CKPNLVAYTTIIDS 241

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK+  V+ A  L  +M D  I PDVVTY++++HG C     NEA  LF EM+ + V P+
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            VTF +++D LCK   + EA  + + M ++G  PNA TYN LMDG+CL  +++ A+++  
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   GC     SYNILINGYCK + ++EA SL  EM  K + P  VTY+TL  GL ++ 
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           + + AL LF EM   G+  D  TY+T +DGLCK+G++ EA++L ++++  K E DI  YN
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYN 481

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI+G+  +G+L+ A ELF  L    + P + TY IMI+GL  +G  D+A +LF  ME++
Sbjct: 482 ILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDD 541

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
              P+  +++++I GF++  + S    L+ +M  K+   D+S   +++DL  ++EI
Sbjct: 542 GFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDEI 597



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 252/470 (53%), Gaps = 6/470 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+LR    P+   F   +  +  + +     +L  ++  FG   NV + N LIN LC
Sbjct: 79  SFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLC 138

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R  H + A+++  +M     ++G+  +P+ +T++T+I+G C EG + +A  LF +M    
Sbjct: 139 RLNHVVFAISVLGKMF----KLGI--QPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDV++Y+++I+GLC + + + A +L  +M ++G +P++V +  I+D LCK+  +++A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL  MV RG+ P+  TY+T++ GFC +G +N A  LF  M       + V++ IL++G 
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   V EA  ++  M  KG +P   TYN L  G    +Q++ A K+ D M   G A   
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y   I+G CK   + EA  L   +   +   D   Y+ L+ GLC+ GR + A  LF  
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L+P+++TY+ ++ GLC  G +D+A  L   M+E+   PD++ +++LI G     +
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                EL  K+    + P     +I++  L+K  +S ++   F   E  G
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 126/260 (48%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I+ A   F  M  M  +   V +   +    K K+    +SL  +M   G+   V + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L   L  ++ V  A+ +  +M + G+  D  T+ T I+G C  G I EAV LF  +    
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            + D+ +Y+ +I+GLCKSG    A +L   +      PN+V Y  +I  LC D  ++ A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           DL  +M +    PDV+T+  ++HGF  +   ++   L ++M  + VMP+    +I+VD L
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 568 VKNEISLKSLPSFLVQERQG 587
            K  +  ++   F    ++G
Sbjct: 313 CKEGMVSEARCVFEAMTKKG 332


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/532 (39%), Positives = 317/532 (59%), Gaps = 13/532 (2%)

Query: 42  INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPN 95
           +NV T ++A  +F+ MLRM P PP +  F+ LL S+ + KHY T      ++++ G+  N
Sbjct: 30  LNVNTIDDALSLFNRMLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHN 88

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
            YT NILIN FC + R+   F   G IL+  + P+ ATF +LI+GL  E +I EA  LF 
Sbjct: 89  TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           K+   G +P+V+TY TLINGLC+ G+T  A+     M   N      C+P  V YSTIID
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN------CRPTVVVYSTIID 202

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            LCK+  + +A +LF  M  + I+P+  TY+SLIHGLC    W EA RLF  M+ + + P
Sbjct: 203 SLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP 262

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
             +TFN ++D LCK   + +A  ++D+M+Q  ++P+  TYN+LMDG CL  ++ +   +F
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
            +M   GC    +SY  LINGYCK + +++A+ L+ EM  +G+ P  VTYNTL  GL  +
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            ++  A+ LF EM   G   D  TY    D LCKN  + EA+ L + +     + DI  Y
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           + ++DG+C++G L+ A +LF  L    L P+V TY IMI GLC  G + +A  LF +M+E
Sbjct: 443 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 502

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           N  +P+  T++++  GF+R NE  +  +L  +M  +    D S  +++V++L
Sbjct: 503 NGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 232/452 (51%), Gaps = 6/452 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+LR    P+   F+ L+  +          +L+ ++ +FG   N  T N LIN  C 
Sbjct: 42  FNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCH 101

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++  ++     ++G   +P+T T++T+I GLC EG + +A  LF +M  E  
Sbjct: 102 LNRLGFAFSVLGDIL----KLGY--QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGF 155

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDV+TY +LI+GLC   + + A R    M  +  +P+VV ++ I+D LCK+R++ EA  
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALS 215

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M+ +G+ PN  TY++L+ G C++G    A  LF +M       D +++N L++  C
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   V +A  +   M+   +KP VVTYN+L  G     ++   + +FD M R G      
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +YTT I+G CK   + +A+ LF  +       D   YN LI GLC  GRL+ A  LF  +
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                +P++VTY I+   LC + ++ +A  L   +E     PD+  + +++ G  R  E 
Sbjct: 396 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 455

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               +L  K+  K + PD    +I+++ L + 
Sbjct: 456 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQ 487



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 196/373 (52%), Gaps = 12/373 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ SL K++     L+      A G+ PN +TY+ LI+  C +G        
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++     P+  TFN+L+  L  E  +++A  +   +     +P+V+TYN+L++G C 
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCL 311

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                  +N+F+ M          C P+ ++Y+T+I+G CK   +DKA  LF +M  + +
Sbjct: 312 RSEMGKTVNVFDTMVRKG------CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD VTYN+LIHGLCH     +A  LF EM+  G  P +VT+ ++ D LCKN ++ EA  
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL ++    + P+   Y+ +MDG C  G++  A +LF  + S G   D  +Y I+ING C
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   + EA  L+ EM   G  P   TYN +  G    ++   A++LF EM   G + D  
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVS 545

Query: 419 TYTTFIDGLCKNG 431
           T T  ++ L  +G
Sbjct: 546 TTTLLVEMLSDDG 558



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 165/339 (48%)

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
           + N  ++A  LF  M+     PS+V F+ ++  + + +       L   M   G+  N  
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T N L++ FC + ++  A  + G +  +G +    ++  LI G C   ++ EAL L+ +M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             +G +P V+TY TL  GL ++     A++    M++         Y+T ID LCK+  +
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA+ LF  +       +   Y+ LI GLC  G  K A  LF ++ H  ++P+ +T+N +
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +  LC +G + KA  +   M ++   PDV+T++ L+ G    +E  K   +   M  K  
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           +P     + +++   K +I  K++  F    +QG + ++
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDT 369



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 14/252 (5%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           +FD M+R     P V S+  L+    K +  D        ++  GL P+  TYN LI+  
Sbjct: 321 VFDTMVR-KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C +GR+      F  ++     P+  T+  L   L    R+ EA  L   ++    +P++
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
             Y+ +++G+CR G    A +LF ++++          P+  TY+ +I+GLC++G + +A
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKG------LHPDVRTYTIMINGLCQQGLLAEA 493

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             LF +M +   +P+  TYN +  G    N+   A +LF EM+ +G    V T  +++ E
Sbjct: 494 SKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV-E 552

Query: 287 LCKNRKMDEASR 298
           +  +  +D++ +
Sbjct: 553 MLSDDGLDQSVK 564


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/567 (36%), Positives = 335/567 (59%), Gaps = 18/567 (3%)

Query: 15  SAPISAFRSNFSSLL---VHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN 71
           S+ +S+   +FSS+    V FR+   R G ++ I  ++A  +F  M+R  P P  V  F+
Sbjct: 36  SSFLSSCERDFSSITNGNVCFRE-RLRSGIVD-IKKDDAIALFQEMIRSRPLPGLVD-FS 92

Query: 72  ILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
              +++A+ K ++       +L   G+  N+YT NI+INCFC+  +    +   G++++ 
Sbjct: 93  RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL 152

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
            + P+  TFN+LI GL  E ++ +A  L  ++   GC+P+++TYN+++NG+CR+G T +A
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
            ++  +M   N       K +  TYSTIID LC++G +D A +LF +M+ + I   VVTY
Sbjct: 213 FDMLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           NSL+ GLC A  WN+   L  +M+ + + P+V+TFNV++D   K  K+ EA+ L   M+ 
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RG+ PN  TYNTLMDG+C+  +++ A  +   M    C  D V++  LI GYC  K V++
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
            + ++R +  +G+    VTY+ L  G  +  +++ A +LF EM   GV  D  TY   +D
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC NG + +A+E+F  L+  K +L I  Y  +I+G+CK G+++ AW LFCSLP   + P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NV+TY +MI GLC  G + +A  L   MEE+  AP+  T++ LI   +R  + +   +L+
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEI 572
            +MK      DAS + +V+D+L+  E+
Sbjct: 567 EEMKSCGFSADASSIKMVIDMLLSGEL 593



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 6/396 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ LF+EM            P  V +S     + +    +       Q++   I  ++ T
Sbjct: 72  AIALFQEMIRSRP------LPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            N +I+  C       A  +  ++M  G +P   TFN +++ LC   K+ +A  L+D MV
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G +P+  TYN++++G C  G  + A ++   ME    K D  +Y+ +I+  C++  ++
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A+SL++EM +KGIK +VVTYN+L  GL +  +      L  +M    +  +  T+   +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D   K G + EA EL++ +       +I  YN L+DG C   RL  A  +   +      
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++VT+  +I+G C   ++D    +F ++ +     + +T+ +L+ GF +  +     EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +M    V+PD     I++D L  N    K+L  F
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 1/197 (0%)

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G+ +I + + A+ LF EM R         ++ F   + +       ++  + L +     
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +I   N +I+  C+  +  FA+ +   +      P+  T+N +I GLC +G++ KA  L 
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M EN   PD++T++ +++G  R  + S   ++L KM+E+ V  D    S ++D L ++
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 571 EISLKSLPSFLVQERQG 587
                ++  F   E +G
Sbjct: 242 GCIDAAISLFKEMETKG 258


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/531 (39%), Positives = 318/531 (59%), Gaps = 13/531 (2%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           N  T +EA   F+ ML M P PP V  F  +L S+A  KHY T      ++++ G+  ++
Sbjct: 51  NFNTIDEALSSFNRMLHMQP-PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDV 109

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           YT  I+IN FC + RV  GF    +I +    P+ ATF +LI+GL  E +I EA  LF K
Sbjct: 110 YTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDK 169

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +   G +PN +TY TLI+GLC+ G++  A+ L   M   N      C+PN +TY+TIID 
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN------CEPNVITYNTIIDC 223

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           L K+  V++A  +F +M  + I+P+V TYNS+IHGLC  ++W     L  EM+D  + P+
Sbjct: 224 LFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VV F  ++D LCK   +  A  ++D+M+QRGV P+  TY  LMDG CL  +++ A+++F 
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           +M   GC  + +SY+ LINGYCK + +++A+ L+ EM  + + P +VTYNTL  GL  + 
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           ++  A+ LF EM   G   D  TY   +D LCK  ++ +A+ + + +       DIQ+YN
Sbjct: 404 RLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYN 463

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +IDG+C+ G L+ A +LF SL    L P+V TY IMI GLC  G + +A  LF +M  +
Sbjct: 464 IVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTD 523

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             +PD  T++++  GF+R NE     +LL +M  +    DAS ++++V++L
Sbjct: 524 GCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/373 (33%), Positives = 194/373 (52%), Gaps = 12/373 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++  L K++  +  LN      A G+ PN+ TYN +I+  CK          
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ S   PN   F +L+  L  E  +  A  +   +   G EP+V+TY  L++G C 
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  +F+ M          C PN ++YST+I+G CK   +DKA  LF +M    +
Sbjct: 332 RSEMDEADKVFDTMVRKG------CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++VTYN+LIHGLCH     +A  LF EM+  G  P +VT+ +++D LCK R +D+A  
Sbjct: 386 VPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMA 445

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  +    + P+  +YN ++DG C +G++  A +LF S+ S G   D  +Y I+ING C
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
               + EA  L+REM + G  P   TYN +  G    ++   A++L  EM   G +AD  
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAS 565

Query: 419 TYTTFIDGLCKNG 431
           T T  ++ L  +G
Sbjct: 566 TITLIVEMLSDDG 578



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 190/382 (49%)

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           E +++ N  + +   P+ V ++ I+  +          +L  QM    I  DV T   +I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           +  CH N  +    +  ++   G QP   TF  ++  LC   K+ EA  L D MV  G +
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TY TL+ G C +G    A  L  SM    C+ + ++YN +I+   K+++V EAL++
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           + EM++KGI P V TYN++  GL +  + +H   L +EM    +  +   +TT +D LCK
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G +  A ++   +     E D+  Y  L+DG C    +  A ++F ++      PNV++
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y+ +I G C   ++DKA  LF +M +    P+++T++ LIHG   +        L H+M 
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416

Query: 550 EKKVMPDASIVSIVVDLLVKNE 571
               +PD     I++D L K  
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTR 438



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 30/255 (11%)

Query: 80  NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
           +K +DT +   G  PN+ +Y+ LIN +CKI R+      F  + +    PN  T+N+LI 
Sbjct: 339 DKVFDTMVRK-GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIH 397

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL---------NLFE 190
           GL    R+ +A ALF ++ A G  P+++TY  L++ LC+T H   A+         NL  
Sbjct: 398 GLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAP 457

Query: 191 EMANGNGEIGVVCK--------------------PNTVTYSTIIDGLCKEGFVDKAKALF 230
           ++ + N  I  +C+                    P+  TY+ +I+GLC +G + +A  LF
Sbjct: 458 DIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLF 517

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M  +  +PD  TYN +  G    N+   A +L  EM+ +G      T  +I++ L  +
Sbjct: 518 REMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDD 577

Query: 291 RKMDEASRLLDLMVQ 305
                  ++L   VQ
Sbjct: 578 GLDQSVKQILHEFVQ 592


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/536 (37%), Positives = 319/536 (59%), Gaps = 14/536 (2%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           R G ++ I  ++A  +F  M+R  P P  V  F+   + +A  K ++       ++   G
Sbjct: 38  RSGIVD-IKEDDAIDLFQEMIRSRPLPSLVD-FSRFFSGVASTKQFNLVLDFCKKMELNG 95

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +  N+YT NI+INCFC+  +    +   G++++  + P+  TFN+LI GL  ES++ EA 
Sbjct: 96  IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV 155

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L  ++   GC+PNV+TYN+++NG+C++G T +AL+L  +M   N       K +  TYS
Sbjct: 156 VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN------VKADVFTYS 209

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           TIID LC++G +D A +LF +M+ + I   +VTYNSL+ GLC A  WN+  +L  +M  +
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P+V+TFNV++D   K  K+ EA+ L   M+ +G+ PN  TYN+LMDG+C+  +++ A
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA 329

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +   M    C  D V++  LI GYCK K V+E + L+R++  +G+    VTY+ L  G
Sbjct: 330 NNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQG 389

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  ++E A +LF EM   GV  D  TY   +DGLC NG + +A+E+F  L+  K  LD
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  Y  +I+G+CK G+++ AW LFCSLP   + PNV+TY +MI GLC  G + +A  L  
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 509

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            MEE+   P+  T++ LI   +R  + +   +L+ +MK      DAS + +V+D+L
Sbjct: 510 KMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 193/396 (48%), Gaps = 6/396 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF+EM            P+ V +S    G+      +       +M+   I  ++ T
Sbjct: 49  AIDLFQEMIRSRP------LPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            N +I+  C       A  +  ++M  G +P   TFN +++ LC   K+ EA  L+  MV
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G +PN  TYN++++G C  G  + A +L   M+    K D  +Y+ +I+  C++  ++
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A+SL++EM +KGIK ++VTYN+L  GL +  +    ++L  +M    +  +  T+   I
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D   K G + EA EL++ +       +   YN L+DG C   RL  A  +   +      
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++VT+  +I+G C   ++D+   LF  + +     + +T+ +L+ GF +  +     EL
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +M    V+PD     I++D L  N    K+L  F
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 7/198 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++ TY IL++  C  G++      F  + +S    +   +  +I+G+    ++ +A
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF  L   G +PNV+TY  +I+GLC+ G    A  L  +M     E      PN  TY
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNE------PNDCTY 523

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW-NEAKRLFIEMM 269
           +T+I    ++G +  +  L  +MK    + D  +   +I  L  A  W  E +R      
Sbjct: 524 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWFKEPRRSPGVKR 583

Query: 270 DQGVQPSVVTFNVIMDEL 287
            +G Q  ++ FN I   L
Sbjct: 584 FRGTQAYLMPFNTITASL 601



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 2/212 (0%)

Query: 377 GIKPTVVTYNT-LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           GI    V Y   L  G+ +I + + A+ LF EM R         ++ F  G+        
Sbjct: 25  GISDGRVCYGERLRSGIVDIKE-DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNL 83

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
            ++  + + +     +I   N +I+  C+  +  FA+ +   +      P+  T+N +I 
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           GLC + ++ +A  L   M EN   P+V+T++ +++G  +  + S   +LL KM E+ V  
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           D    S ++D L ++     ++  F   E +G
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 235


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 220/552 (39%), Positives = 329/552 (59%), Gaps = 17/552 (3%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL---NATGLFP---NL 96
           N +  ++A   F  M+R++P P  V  F   L S AK K Y T +   N   LF    N+
Sbjct: 70  NNVCVDDALASFYRMVRINPRPS-VVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNV 128

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           Y+ NILINC C++  V       G++ +    P+A TFN+LI GL  E +I EA  LF +
Sbjct: 129 YSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNE 188

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +   G EPNVI+Y T+INGLC+TG+T +A+++F++M   NG     CKPN VTYSTIID 
Sbjct: 189 MVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPNVVTYSTIIDS 242

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK+  V+ A     +M +  I P+V TYNS++HG C+    NEA RLF EM+ + V P+
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN 302

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            VTF +++D LCK   + EA  + + M ++GV P+  TYN LMDG+CL   +N A+++F 
Sbjct: 303 TVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFE 362

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   GC     SYNILINGYCK++ ++EA SL  EM  K + P  VTY+TL  GL ++ 
Sbjct: 363 IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG 422

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           + + AL LF EM   G   +  TY   +DG CK+G++ EA++L ++++  K E +I  Y 
Sbjct: 423 RPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYT 482

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI+G+  +G+L+ A ELF  L      P++ TY +MI+GL  +G  D+A DLF  ME++
Sbjct: 483 ILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              P+  +++++I GF++  + S    L+ +M  K+   + S   +++DL  ++EI    
Sbjct: 543 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEI---- 598

Query: 577 LPSFLVQERQGE 588
           +  F+    QG 
Sbjct: 599 ISQFMRGSSQGR 610


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/550 (38%), Positives = 329/550 (59%), Gaps = 17/550 (3%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYT 98
           I+ ++A   F  M+RM+P P  V+ F   L S AK K Y T      +++  G+  N+Y+
Sbjct: 67  ISIDDALASFYRMVRMNPRPS-VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            N+LINC C++  V       G++ +    P A+TFN+LI GL  E +I EA  LF ++ 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G EPNVI+YNT+INGLC+TG+T +A+++F++M   NG     CKP+ VTY+TIID LC
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPDVVTYNTIIDSLC 239

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+  V+ A     +M D  I P+V TYN ++HG C     NEA RLF EM+ + V P  V
Sbjct: 240 KDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTV 299

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T  +++D LCK   + EA  + + M ++GV PN  TYN LMDG+CL   +N A+++F  M
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              GC     SYNILING+CK++ ++EA SL  EM  K + P  VTY+TL  GL +  + 
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + AL +F EM   G+  +  TY+  +DG CK+G++ EA++L ++++  K E +I  +  L
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+G+  +G+L+ A ELF  L    + P + TY +MI+GL  +G  D+A DLF  ME++  
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            P+  +++++I GF++  + S    L+ +M  K+   + S   +++DL  ++EI    + 
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEI----IS 595

Query: 579 SFLVQERQGE 588
            F+    QG 
Sbjct: 596 QFMRGSSQGR 605



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 147/298 (49%)

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           N  +D+A      MV+   RP+   +   +  F    + +    L   M+  G  H+  S
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
            N+LIN  C+   V+ A+S+  +M   GI PT  T+N L  GL    +++ A++LF+EM 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R G   +  +Y T I+GLCK G    AV++F+ +    C+ D+  YN +ID LCK   + 
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A E    +    + PNV TYN M+ G C  GQ+++A  LF +M      PD +T  +L+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            G  +    S+   +   M EK V P+ S  + ++D      +  ++   F +  RQG
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/563 (38%), Positives = 324/563 (57%), Gaps = 25/563 (4%)

Query: 11  FSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSF 70
            S  S  +S   + F S  +HF  L            ++A   F+ ML MHP PP +  F
Sbjct: 31  LSIPSPFLSLLHNRFRSKYLHFNTL------------DDALSSFNRMLHMHP-PPSIVDF 77

Query: 71  NILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
             +L S+ K K Y T      ++++ G+  N+YT N+LIN FC + RV+  F    +IL+
Sbjct: 78  AKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILK 137

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P+ A+F +LIKGL  E +I EA  LF K+   G +P+V+ Y TLINGLC+TGHT  
Sbjct: 138 LGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSA 197

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ L   M  GN      C+P+ V Y T+I  LCK+    +A  LF +M  + I+P++VT
Sbjct: 198 AIRLLRSMEKGN------CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            NSL++ LC+  +W     L  EM+D  + P+ ++   ++D LCK   + +A  ++D+M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           Q GV P+  TY  L+DG CL  +++ A ++F  M   GC  +  SYN LINGYCK + ++
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A+ L+ EM  + + P  VTYNTL  GL  + +++ A+ LF EM   G   D  TY   +
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D LCKN ++ +A+ L + +     + DIQ Y  +IDG+C++G L+ A +LF +L    L 
Sbjct: 432 DYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK 491

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PNV TYNIM  GLC  G +D+A  LF++M+ENA + D  T++ +  GF+R NE S+  +L
Sbjct: 492 PNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQL 551

Query: 545 LHKMKEKKVMPDASIVSIVVDLL 567
           L +M  +    D S  +++V +L
Sbjct: 552 LEEMLARGFSCDVSTTTLLVGML 574



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 188/373 (50%), Gaps = 12/373 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +  L+ SL K++      N        G+ PN+ T N L+   C +G        
Sbjct: 212 PDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL 271

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ S   PNA +  +++  L  E  + +A  +   +   G EP+V+TY  LI+G C 
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A+ +F+ M +        C PN  +Y+T+I+G CK   +DKA  LF +M  + +
Sbjct: 332 RSEMDEAVKVFDMMVHKG------CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VTYN+LIHGLCH     +A  LF EM+  G  P +VT+ +++D LCKN  +D+A  
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  +    + P+   Y  ++DG C  G++  A +LF ++ S G K +  +YNI+ +G C
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC 505

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++EA  L+ EM          TYNT+  G    ++   A++L +EM   G + D  
Sbjct: 506 KRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVS 565

Query: 419 TYTTFIDGLCKNG 431
           T T  +  L  +G
Sbjct: 566 TTTLLVGMLSDDG 578



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 182/366 (49%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V ++ I+  + K        +L  +M    I  +V T N LI+  CH N  N A  +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP   +F  ++  LC   ++ EA  L D M+  G +P+   Y TL++G C 
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G  + A  L  SME   C+ D V Y  LI+  CK+++  +A +L+ EM++KGI P +VT
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            N+L   L  + + +H   L +EM    +  +  + TT +D LCK G + +A ++   + 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               E D+  Y  LIDG C    +  A ++F  + H    PNV +YN +I G C   +MD
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KA  LF +M      P+ +T++ LIHG   +        L  +M     +PD     I++
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 565 DLLVKN 570
           D L KN
Sbjct: 432 DYLCKN 437



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 56/187 (29%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           + L++ GL PN++TYNI+ +  CK G +                                
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLD------------------------------- 511

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
               EA  LF ++    C  +  TYNT+  G  R   T  A+ L EEM       G  C 
Sbjct: 512 ----EATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLAR----GFSCD 563

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKA---------LFLQMKDENI--NPDVVTYNSLIHGLC 253
              V+ +T++ G+  +  +D+++A         L +Q+KD       D+     +I  L 
Sbjct: 564 ---VSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVFCKEDDINALGKVISDL- 619

Query: 254 HANDWNE 260
             NDW E
Sbjct: 620 --NDWLE 624


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/589 (36%), Positives = 339/589 (57%), Gaps = 50/589 (8%)

Query: 21  FRSNFSSLLVH-FRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
           +R  FS    + +R+  +R G ++ +  ++A  +F  M++  P P  +  F+ LL+++AK
Sbjct: 36  WRRAFSGKTSYDYREKLSRNG-LSELKLDDAVALFGEMVKSRPFPSIIE-FSKLLSAIAK 93

Query: 80  NKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--------- 124
              +D       ++   G+  N YTY+IL+NCFC+  ++ L     G++++         
Sbjct: 94  MNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVT 153

Query: 125 -------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
                   C                   + P+  TFN+LI GL   ++  EA AL  ++ 
Sbjct: 154 LSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMV 213

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A GC+P++ TY T++NGLC+ G   +AL+L ++M  G  E       N V Y+TIIDGLC
Sbjct: 214 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ANVVIYNTIIDGLC 267

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   +D A  LF +M+ + I PDV TYNSLI  LC+   W++A RL  +M+++ + P+VV
Sbjct: 268 KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFN ++D   K  K+ EA +L D M+QR + PN  TYN+L++GFC+  +++ A+++F  M
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S  C  D V+YN LI G+CK K VEE + L+REM  +G+    VTYNTL  GLF+    
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A K+F +M  DGV  D  TY+  +DGLCK G + +A+ +F  L+  K E +I  YN +
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+G+CK+G+++  W+LFCSL    + PNV+ Y  MI G C  G  ++A  LF +M+E+  
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            PD   ++ LI   +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 568 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 196/374 (52%), Gaps = 16/374 (4%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N ++  L K KH D       ++   G+ P+++TYN LI+C C  GR S        ++
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                PN  TFNSLI     E +++EA  LF ++     +PN++TYN+LING C      
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  +F  M + +      C P+ VTY+T+I G CK   V++   LF +M    +  + V
Sbjct: 379 EAQQIFTLMVSKD------CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYN+LI GL  A D + A+++F +M+  GV P ++T+++++D LCK  K+++A  + + +
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +  + PN  TYN +++G C  GK+    +LF S+   G K + + Y  +I+G+C+    
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           EEA +L+REM   G  P    YNTL            + +L  EM+  G   D  T +  
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 612

Query: 424 I----DGLCKNGYI 433
           I    DG  +  Y+
Sbjct: 613 INMLHDGRLEKSYL 626



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 194/370 (52%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G+  +  T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  +L  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D V++N LI+G   + +  EA++L   MV++G +P + TY T+  GL +   ++ AL
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L  +M++  + A+   Y T IDGLCK  ++ +A +LF  +     + D+  YN LI  L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + PNVVT+N +I     +G++ +A  LF +M + +  P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +T++ LI+GF   +   +  ++   M  K  +PD    + ++    K +   + +  F  
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 422 MSQRGLVGNT 431



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 139/278 (50%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+D+A  L   MV+    P+   ++ L+     M K +    L   M+++G  H+  +Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL+N +C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A+ L D+M   
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   DT T+ T I GL  +    EAV L   +    C+ D+  Y  +++GLCK G +  A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   +  G +  NVV YN +I GLC    MD A DLF  ME     PDV T++ LI  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                  S  + LL  M E+K+ P+    + ++D   K
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAK 338


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 315/521 (60%), Gaps = 14/521 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY-------DTRLNATGLFPNLYTYN 100
           ++A   F++ML   P P  +  FN LL+++ K +HY         ++   GL P+ YT +
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQ-FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +LINCF ++ RV LGF    +I++        TFN+LI GL    +  +A  LF  + A 
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G +P+V TY T+INGLC+ G T+ A  LF +M    GE G  C+P+ VTYSTIID LCK+
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKM----GEAG--CQPDVVTYSTIIDSLCKD 275

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             V++A  +F  MK + I+P++ TYNSLI GLC+ + W EA  +  EMM   + P++VTF
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           +++++  CK   + EA  +L  M + GV PN  TY++LM+G+ L  ++  A +LF  M +
Sbjct: 336 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMIT 395

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GCK D  SYNILINGYCK K + EA  L+ EM+ +G+ P +V+YNTL  GL ++ ++  
Sbjct: 396 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 455

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  LF  M  +G   D  TY+  +DG CK GY+ +A  LFR ++    + ++  YN LID
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 515

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            +CKS  LK A +LF  L    L PNV  Y  +I GLC +G +D+A + F +MEE+   P
Sbjct: 516 AMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 575

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           +  +++++I GF++  + S+  +L+ +M+EK  + D +  +
Sbjct: 576 NEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVATTA 616



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 242/470 (51%), Gaps = 7/470 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLC 177
           F  +L     P    FN L+  +       +A  +L  +++  G  P+  T + LIN   
Sbjct: 109 FNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFF 168

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +     +  ++  ++      I +  +   VT++T+I+GLCK G   +A  LF  M    
Sbjct: 169 QLQRVDLGFSVLAKI------IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDV TY ++I+GLC   +   A  LF +M + G QP VVT++ I+D LCK+R+++EA 
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +   M  +G+ PN  TYN+L+ G C   +   A  +   M S+    + V++++LIN +
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   V EA  + + M   G++P VVTY++L  G     +V  A KLFD M   G   D 
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDV 402

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y   I+G CK   I EA +LF  +       DI +YN LIDGLC+ GRL+ A +LF +
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P++ TY+I++ G C  G + KA  LF  M+     P+++ +++LI    +   
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  +L  ++  + + P+  I + +++ L K  +  ++L +F   E  G
Sbjct: 523 LKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 227/432 (52%), Gaps = 19/432 (4%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH---TMIALNLFEEMANGNGEIGVVC 203
           I +A A F  +      P +I +N L++ + +  H    +I+L+   E+A          
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAG--------L 153

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+T T   +I+   +   VD   ++  ++    +   +VT+N+LI+GLC    + +A  
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           LF +M+ +G QP V T+  I++ LCK  +   A+ L   M + G +P+  TY+T++D  C
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              ++N A ++F  M++ G   +  +YN LI G C      EA ++  EM+S  I P +V
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 384 TYNTLFLGLF----EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           T+ +L + +F     + +    LK   EM   GV  +  TY++ ++G      ++EA +L
Sbjct: 334 TF-SLLINIFCKEGNVFEARGVLKTMTEM---GVEPNVVTYSSLMNGYSLQAEVVEARKL 389

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  +    C+ D+ +YN LI+G CK+ R+  A +LF  + H  L P++V+YN +I GLC 
Sbjct: 390 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 449

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++ +A DLF +M  N   PD+ T+ +L+ GF +    +K   L   M+   + P+  +
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509

Query: 560 VSIVVDLLVKNE 571
            +I++D + K+ 
Sbjct: 510 YNILIDAMCKSR 521


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/521 (38%), Positives = 305/521 (58%), Gaps = 14/521 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY-------DTRLNATGLFPNLYTYN 100
           ++A   F++ML   P P  +  F  LL+++ K   Y         ++   GL P++YT +
Sbjct: 76  DDALASFNHMLHREPLPC-IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI+CF  + RV L F  F ++++    P+A TFN+LI GL    +  +A   F   +A 
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           GC+P V TY T+INGLC+ G T  A  LF++M          C+PN VTY+ +ID LCK+
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG------CQPNVVTYNILIDSLCKD 248

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             V++A  +F  MK + I+PD+ TYNSLI GLC+   W EA  L  EM    + P++ TF
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           NV++D +CK  K+ EA  +   M + GV P+  TY++LM G+ L  +I  A +LF +M +
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GCK D  SYNILI GYCK K ++EA  L+ EM+ +G+ P  V YNTL  GL ++ ++  
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLRE 428

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  LF  M  +G   D  TY+  +DG CK GY+ +A  LFR ++    + DI  YN LID
Sbjct: 429 AQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILID 488

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            +CK G LK A +LF  L    L+PNV  Y  +I  LC +G +D+A + F +ME +   P
Sbjct: 489 AMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPP 548

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           D  +++++I GF++  + S+  +L+ +M+++  + +A   +
Sbjct: 549 DEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 240/471 (50%), Gaps = 7/471 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGL 176
           +F  +L     P    F  L+  +    +   A  +L  +++  G  P++ T + LI+  
Sbjct: 81  SFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCF 140

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
                  +A ++F +M      I +  +P+ VT++T+I+GLCK G   +A   F   +  
Sbjct: 141 SHLQRVDLAFSVFSKM------IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              P V TY ++I+GLC   +   A  LF +M + G QP+VVT+N+++D LCK++ ++EA
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +   M  + + P+  TYN+L+ G C   +   A  L   M S+    +  ++N+L++ 
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK  +V EA  +++ M   G++P VVTY++L  G     ++  A KLFD M   G   D
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             +Y   I G CK   I EA +LF  +       D   YN LI GLC+ GRL+ A +LF 
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           ++     +P++ TY++++ G C +G + KA  LF  M+     PD+  +++LI    +  
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                 +L  ++  + ++P+  I + +++ L K  +  ++L +F   E  G
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 333/594 (56%), Gaps = 62/594 (10%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           N   S A+ P S   S       H   +   +     I+  +A   FD M+R       +
Sbjct: 38  NPQISSANNPKSLHASPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR------SI 91

Query: 68  SSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
            SFN LLA LAK +HY        +++  GL+P+L T NILINC C + R++        
Sbjct: 92  FSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRIN-------- 143

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
                            +GL A + IM    +          P+V+T+ TLI GLC    
Sbjct: 144 -----------------EGLAAMAGIMRRGYI----------PDVVTFTTLIKGLCVEHR 176

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE----- 236
            + A  LF  M     ++G  C PN VTY T+I GLC  G ++ A     +M ++     
Sbjct: 177 IIEATKLFMRMQ----KLG--CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYV 230

Query: 237 -NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
            N  P+V++Y+ +I GLC   +W EA  LF EM+DQGVQP+VVTF+V++D LCK  ++ +
Sbjct: 231 FNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIK 290

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A +LL++M+Q G+ PN  TY +L+ GFCL+G +N A+ELF SM S G + D +SYN+LIN
Sbjct: 291 AKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLIN 350

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           GYCK  +VEEA+ L+ EM+  G+ P V T   L   LF   +V+ A +LF  ++   +  
Sbjct: 351 GYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPK 410

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D      F+DGLCKNGYI EA++LF  L     +LDI+ + CLIDGLCK+G+L+ AWELF
Sbjct: 411 DLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELF 470

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             L    + P+ + Y+ MI G C  GQ+DKA  LF  MEEN  +PD+IT+ +L+ GF   
Sbjct: 471 EKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYES 530

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI---SLKSLPSFLVQERQ 586
           N+  KV +LLH+M EK V PD  I +IV D++ K+E     L  L  F VQ+ +
Sbjct: 531 NKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHR 584


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/605 (35%), Positives = 332/605 (54%), Gaps = 62/605 (10%)

Query: 5   SCCNRSFSFASAPISAFRSNFS-SLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPS 63
           S C R   F+      +R   S + L+H +              +EA  +F  M++  P 
Sbjct: 16  SFCLRGIYFSGLSYDGYREKLSRNALLHLK-------------LDEAVDLFGEMVKSRPF 62

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  V  F+ LL+++AK K +D       ++   G+  NLYTYNI+INC C+  ++S    
Sbjct: 63  PSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121

Query: 118 AFGRILR-----------------------------------SCFTPNAATFNSLIKGLH 142
             G++++                                     + P+  TF +L+ GL 
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
             ++  EA AL  ++   GC+P+++TY  +INGLC+ G   +ALNL  +M  G  E  VV
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
                  YST+ID LCK   VD A  LF +M ++ I PDV TY+SLI  LC+   W++A 
Sbjct: 242 ------IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           RL  +M+++ + P+VVTFN ++D   K  K+ EA +L D M+QR + PN  TYN+L++GF
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C+  +++ A+++F  M S  C  D V+YN LING+CK K+V + + L+R+M  +G+    
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY TL  G F+    ++A  +F +M  DGV  +  TY T +DGLCKNG + +A+ +F  
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           L+  K E DI  YN + +G+CK+G+++  W+LFCSL    + P+V+ YN MI G C  G 
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            ++A  LF+ M+E+   PD  T++ LI   +R  + +   EL+ +M+  +   DAS   +
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL 595

Query: 563 VVDLL 567
           V D+L
Sbjct: 596 VTDML 600



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 228/452 (50%), Gaps = 8/452 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +++S   P+   F+ L+  +    +     +   K++  G   N+ TYN +IN LCR
Sbjct: 53  FGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCR 112

Query: 179 TGHTMIALNLFEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                 AL +  +M   G G       P+ VT +++++G C    + +A AL  QM +  
Sbjct: 113 RSQLSFALAILGKMMKLGYG-------PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD VT+ +L+HGL   N  +EA  L   M+ +G QP +VT+  +++ LCK  + D A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL+ M +  +  +   Y+T++D  C    ++ A  LF  M++ G + D  +Y+ LI+  
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C      +A  L  +M+ + I P VVT+N+L     +  ++  A KLFDEM +  +  + 
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY + I+G C +  + EA ++F  +    C  D+  YN LI+G CK+ ++    ELF  
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    LV N VTY  +I G       D A+ +F  M  +   P+++T++ L+ G  +  +
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             K   +   +++ K+ PD    +I+ + + K
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 221/425 (52%), Gaps = 6/425 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ EA  LF ++      P+++ ++ L++ + +     + ++  E+M      +GV    
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SH 98

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  TY+ +I+ LC+   +  A A+  +M      P +VT NSL++G CH N  +EA  L 
Sbjct: 99  NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G QP  VTF  ++  L ++ K  EA  L++ MV +G +P+  TY  +++G C  
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+ + A  L   ME    + D V Y+ +I+  CK + V++AL+L+ EM +KGI+P V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L   L    +   A +L  +M    +  +  T+ + ID   K G +IEA +LF  +  
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              + +I  YN LI+G C   RL  A ++F  +     +P+VVTYN +I G C   ++  
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +LF DM       + +T+  LIHGF + ++      +  +M    V P+    + ++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458

Query: 566 LLVKN 570
            L KN
Sbjct: 459 GLCKN 463



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 193/370 (52%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A  LF +M      P +V ++ L+  +     ++       +M   GV  ++ T+N+
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC+  ++  A  +L  M++ G  P+  T N+L++GFC   +I+ A  L   M  MG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D V++  L++G  ++ +  EA++L   MV KG +P +VTY  +  GL +  + + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M++  + AD   Y+T ID LCK  ++ +A+ LF  +       D+  Y+ LI  L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + PNVVT+N +I     +G++ +A  LF +M + +  P++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +T++ LI+GF   +   +  ++   M  K  +PD    + +++   K +  +  +  F  
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405

Query: 583 QERQGEVGES 592
             R+G VG +
Sbjct: 406 MSRRGLVGNT 415



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 49/306 (16%)

Query: 34  DLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN 80
           D+  R+ + NV+T N             EA  +FD M++     P + ++N L+     +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMH 358

Query: 81  KHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
              D      T + +    P++ TYN LIN FCK  +V  G   F  + R     N  T+
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE--- 191
            +LI G    S    A  +F ++ + G  PN++TYNTL++GLC+ G    A+ +FE    
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478

Query: 192 ------------MANGNGEIGVV--------------CKPNTVTYSTIIDGLCKEGFVDK 225
                       M+ G  + G V               KP+ + Y+T+I G CK+G  ++
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  LF++MK++   PD  TYN+LI       D   +  L  EM          T+ ++ D
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598

Query: 286 ELCKNR 291
            L   R
Sbjct: 599 MLHDGR 604


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/595 (35%), Positives = 341/595 (57%), Gaps = 50/595 (8%)

Query: 15  SAPISAFRS-NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL 73
           ++P+ + R   FS+    +R+  +R   +N +  ++A  +F  M++  P P  V  FN L
Sbjct: 29  ASPLFSLRGVYFSAASYDYREKLSRNALLN-LKLDDAIGLFGEMVQSRPLPSIVE-FNKL 86

Query: 74  LASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--- 124
           L+++AK K +D       R+    +  +LY+YNILINCFC+  ++ L     G++++   
Sbjct: 87  LSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146

Query: 125 -------------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAA 152
                         C                   + P+  TFN+LI GL   ++  EA A
Sbjct: 147 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 206

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   GC+P+++TY  ++NGLC+ G   +AL+L ++M  G  E  VV       Y+T
Sbjct: 207 LVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------IYNT 260

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           IIDGLCK   +D A ALF +M+ + I PDV TYNSLI  LC+   W++A RL   M+++ 
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+VVTF+ ++D   K  K+ EA +L D M++R + P+  TY++L++GFC+  +++ A+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +F  M S  C  + V+YN LI G+CK K VEE + L+REM  +G+    VTYNTL  GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F+    + A K+F +M  DGV  D  TY+  +DGLCK G + +A+ +F  L+  K E DI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN +I+G+CK+G+++  W+LFCSL    + PNV+ Y  MI G C  G  ++A  LF +
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           M+E+   PD   ++ LI   +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 561 MKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 231/451 (51%), Gaps = 6/451 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +++S   P+   FN L+  +    +     +L  +++      ++ +YN LIN  CR
Sbjct: 68  FGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCR 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +AL +  +M     E      P+ VT S++++G C    +  A AL  QM +   
Sbjct: 128 RSQLPLALAVLGKMMKLGYE------PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD VT+N+LIHGL   N  +EA  L  +M+ +G QP +VT+  +++ LCK   +D A  
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M +  +  +   YNT++DG C    I+ A  LF  ME+ G + D  +YN LI+  C
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 +A  L   M+ + I P VVT++ L     +  ++  A KL+DEM +  +  D  
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY++ I+G C +  + EA  +F  +    C  ++  YN LI G CK+ R++   ELF  +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               LV N VTYN +IQGL   G  D A+ +F  M  +   PD+IT+ +L+ G  +  + 
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            K   +   +++ K+ PD    +I+++ + K
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 185/370 (50%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  LF +M      P +V +N L+  +     ++    L   M +  +   + ++N+
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  +L  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D V++N LI+G   + +  EA++L  +MV +G +P +VTY  +  GL +   ++ AL
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L  +M++  + AD   Y T IDGLCK  +I +A  LF  +       D+  YN LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L  ++    + PNVVT++ +I     +G++ +A  L+ +M + +  PD+
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T+  LI+GF   +   +   +   M  K   P+    + ++    K +   + +  F  
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 421 MSQRGLVGNT 430



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 137/303 (45%), Gaps = 45/303 (14%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAS------L 77
            FS+L+    D   +EG +      EA  ++D M++     P + +++ L+        L
Sbjct: 327 TFSALI----DAFVKEGKLV-----EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRL 376

Query: 78  AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            + KH    + +   FPN+ TYN LI  FCK  RV  G   F  + +     N  T+N+L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           I+GL        A  +F K+ + G  P++ITY+ L++GLC+ G    AL +FE +     
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 198 E---------IGVVCK--------------------PNTVTYSTIIDGLCKEGFVDKAKA 228
           E         I  +CK                    PN + Y+T+I G C++G  ++A A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           LF +MK++   PD   YN+LI       D   +  L  EM   G      T +++++ L 
Sbjct: 557 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616

Query: 289 KNR 291
             R
Sbjct: 617 DGR 619


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/520 (39%), Positives = 303/520 (58%), Gaps = 12/520 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNI 101
           ++A   F++ML   P P  +    +L A +   ++YDT ++ T      GL PN+YT +I
Sbjct: 79  DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSI 138

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCF  + RV L F    +I++    P   TF +LI  L    +  +A  LF  + A G
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG 198

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P+V TY T+INGLC+ G T  A  L ++M          C+PN VTYSTIID   K+ 
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG------CQPNVVTYSTIIDSHRKDR 252

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++A  +F  MK + I+PD+ TYNSLI GLC+ + W EA  L  EM    + P +VTFN
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++D +CK  K+ EA  +L  M + GV P+  TY++LM G+ L  ++  A +LF +M + 
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GCK D  SYNILINGYCK K ++EA  L+ EM+ +G+ P  V+YNTL  GL ++  +  A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF  M  +G   +  TY+  +DG CK GY  +A  LFR ++    + ++  YN LID 
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +CKSG L+ A +LF  L    L PN   Y  +I GLC +G +D+A + F +MEE+   PD
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            I+++++I GF+   + S+  +L+ +M++K  + D    +
Sbjct: 553 EISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTTA 592



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 238/482 (49%), Gaps = 7/482 (1%)

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEPN 165
           C    +     +F  +L     P    F  L+  +    +  +     TK ++  G  PN
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           + T + LIN         +A ++  ++      I +  +P  VT++T+I+ LCK G   +
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKI------IKLGLQPTIVTFTTLINWLCKVGKFAQ 186

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  LF  M      PDV TY ++I+GLC   +   A  L  +M + G QP+VVT++ I+D
Sbjct: 187 AMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID 246

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
              K+R+++EA  +   M  +G+ P+  TYN+L+ G C   +   A  L   M S+    
Sbjct: 247 SHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D V++N+L++  CK  +V EA  + + M   G++P VVTY++L  G     +V  A KLF
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D M   G   D  +Y   I+G CK   I EA +LF  +       +  +YN LI GLC+ 
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G L+ A  LF ++     +PN+ TY+I++ G C  G   KA  LF  M+   + P+++ +
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           ++LI    +        +L  ++  K + P+A I + +++ L K  +  ++L +F   E 
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546

Query: 586 QG 587
            G
Sbjct: 547 DG 548


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/625 (37%), Positives = 352/625 (56%), Gaps = 46/625 (7%)

Query: 8    NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
             RS S + +     +++ S    + RD    +    +I  N+A  +FD  L   P P   
Sbjct: 892  QRSGSNSKSEKIGTKASLSPFERYVRD----QCRFGIIKLNDAIKLFDRSLCSEPMPC-T 946

Query: 68   SSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
             +FN LLAS+AK  +Y T      ++N  G+ P+LYT NILI+C C +  V  GF  FG 
Sbjct: 947  DTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGG 1006

Query: 122  ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
             L+  F P+A T  +L+KG+  E+ I +A  LF ++   G   +  TY  LINGLC+   
Sbjct: 1007 FLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066

Query: 182  TMIALNLFEEM-ANGNGE-------IGVVCK--------------------PNTVTYSTI 213
            T +A+ L E+M  N  G+       I  +CK                    P+ V YS++
Sbjct: 1067 TGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 214  IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            +DGLC+ G + +A   F +M+   I+ DV TYNSLIHGL  A  W E       M+D+G 
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 274  QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             P   TF +++D LCK  K+ EA ++L+LM  +G  P+  TYNTLM+G CL+G++  A +
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 334  LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            LF S+   G K +  SYNILINGYCK+++++EA   + EM  KG+KP+ VTYNTL   L 
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306

Query: 394  EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
            +  +V  A KLF EMQ  G      TY   +DGLCKNG++ EA++LF++++  + + +I+
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366

Query: 454  AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
             ++ L+DG+C++G+L+ AW+ F  +    L P+ + YNI+I GLCN G + +A  L   M
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 1426

Query: 514  EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV---KN 570
            EE    PD ITF+++I   ++ NE  +  +LL +M+ +   PD ++ S+++ L     + 
Sbjct: 1427 EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQW 1486

Query: 571  EISLKSLPSFLVQERQGEVGESNVK 595
              +L SLP+ L    Q  VG   VK
Sbjct: 1487 HAALVSLPNAL----QKGVGSVPVK 1507


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/538 (39%), Positives = 321/538 (59%), Gaps = 15/538 (2%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           N+ +  +A   F+ +L + P PP V  FN LL SL K KHY T      +++ + + PN+
Sbjct: 46  NLHSVADAVASFNQLLGIRPLPP-VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNV 104

Query: 97  YTYNILINCFCKIGR--VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           YT  ILINC C   R  V   F A G++ +    P   TF +L+ GL ++++I++A  LF
Sbjct: 105 YTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLF 164

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++   G  P++ITY T+I GLC+ GHT  AL L ++M     E G  CKP+ V Y+T+I
Sbjct: 165 DEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKME----EKG--CKPDVVAYNTVI 218

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           D LCK+   ++A   F +M D+ I P+VVTY+S++HG C+    NEA  LF +M+ + V 
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+ VTF +++D LCK   + EA R+ ++M + GV P+A TY+ LMDG+CL  +++ A++L
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   G       YNILING+CK++ + EA +L  EM  + + P  VTY+TL  G  +
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             + + A KLF EM   G+  D+ TY+  +DGLCK+G++ EA  L + ++  K E  I  
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN LI G+C  G+L+ A ELF +L    + P+VVTY +MI GL  +G  ++A ++F  M 
Sbjct: 459 YNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            N   P+  T+++ I GF+R  +PS    L+ +M  +    D+S   +++DL   +EI
Sbjct: 519 VNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEI 576



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 247/497 (49%), Gaps = 9/497 (1%)

Query: 80  NKHYDTRL-NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
           ++H+ T   + T + P+  T     + +  +  V+    +F ++L     P    FN L+
Sbjct: 17  HQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLL 76

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG--HTMIALNLFEEMANGN 196
             L  +       +L  ++      PNV T   LIN LC +   H   A +   +M    
Sbjct: 77  GSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMF--- 133

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            ++G+  +P  VT+ T+++GLC +  +  A  LF ++      P ++TY ++I GLC   
Sbjct: 134 -KLGL--QPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIG 190

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
               A +L  +M ++G +P VV +N ++D LCK+R+ +EA      MV +G+ PN  TY+
Sbjct: 191 HTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYS 250

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++ GFC +G++N A  LF  M       + V++ IL++G CK   + EA  ++  M   
Sbjct: 251 SILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G++P   TY+ L  G     Q++ A KLFD M   G A   R Y   I+G CK+  + EA
Sbjct: 311 GVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEA 370

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
             L   +       D   Y+ L+ G C++GR + A +LF  +    L+P+ +TY+I++ G
Sbjct: 371 KTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LC  G +D+A  L   M+E+   P +  +++LI G     +     EL   +  K + P 
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490

Query: 557 ASIVSIVVDLLVKNEIS 573
               ++++  L+K  +S
Sbjct: 491 VVTYTVMISGLLKEGLS 507



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 2/242 (0%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ--VEHALKLF 405
           V +N L+    K K     +SL ++M    I+P V T   L   L   ++  V  A    
Sbjct: 70  VVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSAL 129

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            +M + G+     T+ T ++GLC    II+AV+LF  +  +     +  Y  +I GLCK 
Sbjct: 130 GKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKI 189

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G    A +L   +      P+VV YN +I  LC D + ++A   F +M +    P+V+T+
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
             ++HGF  + + ++   L  +M  + VMP+    +I+VD L K  + L++   F +   
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE 309

Query: 586 QG 587
            G
Sbjct: 310 NG 311


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/539 (41%), Positives = 311/539 (57%), Gaps = 59/539 (10%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYT 98
           IT  +A   FD M+R       + SFN+LL +LAK KHY        +++  GL PN +T
Sbjct: 75  ITSTQALQFFDLMMR------SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFT 128

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            NILINC C + RV                          +GL A + IM    +     
Sbjct: 129 LNILINCLCNVNRVR-------------------------EGLSAMAGIMRRGYI----- 158

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
                P+V+TY +LI GLC       A  LF  M     ++G  C PN VTY T+I GLC
Sbjct: 159 -----PDVVTYTSLIKGLCMEHRISEATRLFIRMQ----KLG--CWPNVVTYGTLIKGLC 207

Query: 219 KEGFVDKAKALFLQMKDE------NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           + G ++ A  L  +M +       N  P++ +YN +I  LC    W EAKRLF EM+DQG
Sbjct: 208 RTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQG 267

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V+P VVTF+ ++D LCK   + EA + L+ M+ RG+ P+  T+ +L++GFCL+G ++ A+
Sbjct: 268 VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAK 327

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           ELF SM S G + D +SY +LI GYCK   VEEA+ LY EM+  G  P + T+  L  GL
Sbjct: 328 ELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGL 387

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F   +V  A KLF  ++   V  +    + F+DGLCKNG + EA+ELF  L+    +LDI
Sbjct: 388 FLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDI 447

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           +++NCLIDGLCK+ +L+ AWELF  L    L P+VVTY IMI G C +GQ+D A  LF  
Sbjct: 448 ESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQM 507

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           MEEN   P+++T+  L+HGF + N+  +V +LLHKM +K V   ASI +IV D++ K+E
Sbjct: 508 MEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDE 566



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 186/359 (51%), Gaps = 9/359 (2%)

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK+G +   +AL  Q  D  +   ++++N L+  L     +++   L+ +M   G+ P+ 
Sbjct: 70  CKKGNITSTQAL--QFFDLMMR-SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T N++++ LC   ++ E    +  +++RG  P+  TY +L+ G C+  +I+ A  LF  
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK------GIKPTVVTYNTLFLG 391
           M+ +GC  + V+Y  LI G C+   +  AL L++EM++         KP + +YN +   
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +I + + A +LF+EM   GV  D  T++  ID LCK G +IEA +   T+ +     D
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  +  LI+G C  G L  A ELF S+P     P+V++Y ++I G C    +++A  L+ 
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +M      PD+ TF +L+ G     +     +L   +K   V  +  I S+ +D L KN
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKN 425


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/606 (36%), Positives = 331/606 (54%), Gaps = 61/606 (10%)

Query: 3   LESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHP 62
           L  CC R FS  S    ++R    S LV              I  ++A  +F  M+   P
Sbjct: 38  LSFCCERGFSAFSDRNLSYRERLRSGLVD-------------IKADDAIDLFRDMIHSRP 84

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
             P V  F+ L +++AK K YD       ++   G+  NLYT +I+INCFC+  ++ L F
Sbjct: 85  -LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
            A G+I++  + PN  TF++LI GL  E R+ EA  L  ++   G +P++IT NTL+NGL
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY-------------------------- 210
           C +G    A+ L ++M     E G  C+PN VTY                          
Sbjct: 204 CLSGKEAEAMLLIDKMV----EYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 211 ---------STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
                    S IIDGLCK G +D A  LF +M+ + I  +++TYN LI G C+A  W++ 
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            +L  +M+ + + P+VVTF+V++D   K  K+ EA  L   M+ RG+ P+  TY +L+DG
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           FC    +++A ++   M S GC  +  ++NILINGYCK   +++ L L+R+M  +G+   
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            VTYNTL  G  E+ ++  A +LF EM    V  +  TY   +DGLC NG   +A+E+F 
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +   K ELDI  YN +I G+C + ++  AW+LFCSLP   + P V TYNIMI GLC  G
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            + +A  LF  MEE+  APD  T+++LI   +   + +K  +L+ ++K      DAS + 
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617

Query: 562 IVVDLL 567
           +V+D+L
Sbjct: 618 MVIDML 623



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 245/486 (50%), Gaps = 41/486 (8%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ S   P    F+ L   +    +     AL  +++  G   N+ T + +IN  CR
Sbjct: 76  FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +A +   ++      I +  +PNT+T+ST+I+GLC EG V +A  L  +M +   
Sbjct: 136 CRKLCLAFSAMGKI------IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD++T N+L++GLC +    EA  L  +M++ G QP+ VT+  +++ +CK+ +   A  
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M +R ++ +A  Y+ ++DG C  G ++ A  LF  ME  G   + ++YNILI G+C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                ++   L R+M+ + I P VVT++ L     +  ++  A +L  EM   G+A DT 
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369

Query: 419 TYTTFIDGLCK------------------------------NGY-----IIEAVELFRTL 443
           TYT+ IDG CK                              NGY     I + +ELFR +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            +     D   YN LI G C+ G+L  A ELF  +    + PN+VTY I++ GLC++G+ 
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           +KA ++F  +E++    D+  ++++IHG    ++     +L   +  K V P     +I+
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549

Query: 564 VDLLVK 569
           +  L K
Sbjct: 550 IGGLCK 555



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 223/456 (48%), Gaps = 6/456 (1%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           S F+    ++   ++    + +  +A  LF  +      P VI ++ L + + +T    +
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
            L L ++M     E+  +   N  T S +I+  C+   +  A +   ++      P+ +T
Sbjct: 107 VLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +++LI+GLC     +EA  L   M++ G +P ++T N +++ LC + K  EA  L+D MV
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G +PNA TY  +++  C  G+   A EL   ME    K D V Y+I+I+G CK+  ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A +L+ EM  KGI   ++TYN L  G     + +   KL  +M +  +  +  T++  I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D   K G + EA EL + +       D   Y  LIDG CK   L  A ++   +      
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PN+ T+NI+I G C   ++D   +LF  M       D +T++ LI GF  + + +   EL
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +M  +KV P+     I++D L  N  S K+L  F
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 35/262 (13%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++  L+    K  H D        + + G  PN+ T+NILIN +CK  R+  G   
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++       +  T+N+LI+G     ++  A  LF ++ +    PN++TY  L++GLC 
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485

Query: 179 TGHTMIALNLFEEMANGNGEIGV---------VC--------------------KPNTVT 209
            G +  AL +FE++     E+ +         +C                    KP   T
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +I GLCK+G + +A+ LF +M+++   PD  TYN LI       D  ++ +L  E+ 
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605

Query: 270 DQGVQPSVVTFNVIMDELCKNR 291
             G      T  +++D L   R
Sbjct: 606 RCGFSVDASTIKMVIDMLSDGR 627


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/580 (36%), Positives = 337/580 (58%), Gaps = 22/580 (3%)

Query: 11  FSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSF 70
           F+++ AP   + +N  S+ V      + E + NV   ++AF +F  M+R  P P  V SF
Sbjct: 19  FAYSIAP-RHYSTNTRSISVKGNFGVSNEFE-NVKCLDDAFSLFRQMVRTKPLPS-VVSF 75

Query: 71  NILLASLAKNKHYDTRLNATGLFPNL---------YTYNILINCFCKIGRVSLGFIAFGR 121
           + LL +L   KHY +      LF  +         +  +I++N  C + R  LGF     
Sbjct: 76  SKLLKALVHMKHYSS---VVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAI 132

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTG 180
             +     N   FN+L++GL AE+++ +A  LF KL +   CEPN + Y T++NGLC+ G
Sbjct: 133 HFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKG 192

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           HT  A +L   M  G+       KPNT  YS +ID  CK+G +D A +L  +MK ++I P
Sbjct: 193 HTQKAFDLLRLMEQGS------TKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPP 246

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D+ TY++LI  LC  + W   + LF+EM+   + P+V TFN ++D LCK  K+++A  ++
Sbjct: 247 DIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM 306

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M+++GV P+  TYN ++DG+ L G+++RA E+F SM +   + + +SYNILINGY + 
Sbjct: 307 RYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQ 366

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K+++EA+ + RE+  KG+KP++VT N L  GLFE+ + + A   FDEM   G   D  T+
Sbjct: 367 KKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTH 426

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T + G  KNG + EA+  F  L   + + +IQ Y  +IDGLCK+G+L  A   F  LP 
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPL 486

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+V+TY  MI G C +G +D+A+D+   ME+N    D  T+++++ GF+R N+ S+
Sbjct: 487 IGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +   L ++  K    +A+ V +++D++ ++   L  +P F
Sbjct: 547 MKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEF 586



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 185/402 (46%), Gaps = 36/402 (8%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-------------- 268
           +D A +LF QM      P VV+++ L+  L H   ++    LF E+              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 269 ---------------------MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
                                  +G+  + V FN ++  L    K+ +A  L   +V+  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 308 V-RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           +  PN   Y T+M+G C  G   +A +L   ME    K +   Y+I+I+ +CK+  ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            SL  EM  K I P + TY+TL   L ++ Q E+   LF EM    +  +  T+ + IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G + +A E+ R +     + D+  YN +IDG    G++  A E+F S+ +  + PN
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +++YNI+I G     ++D+A  +  ++ +    P ++T ++L+HG   +           
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
           +M     +PD      ++    KN +  +++  F   ER+ E
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE 454


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/615 (35%), Positives = 333/615 (54%), Gaps = 50/615 (8%)

Query: 6   CCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPP 65
           CC R FS  S    ++R   SS LV              I  ++A  +F  M++  P  P
Sbjct: 41  CCERGFSTFSDRNLSYRDKLSSGLVG-------------IKADDAVDLFRDMIQSRP-LP 86

Query: 66  PVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
            V  FN L +++AK K Y+       ++ + G+  ++YT +I+INCFC+  ++S  F   
Sbjct: 87  TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTM 146

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           G+I++  + P+   FN+L+ GL  E R+ EA  L  ++   G +P +IT NTL+NGLC  
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206

Query: 180 GHTMIALNLFEEMANGNGE---------IGVVCKP--------------------NTVTY 210
           G    A+ L + M     +         + V+CK                     + V Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S IIDGLCK+G +D A  LF +M+ +    D++TYN+LI G C+A  W++  +L  +M+ 
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P+VVTF+V++D   K  K+ EA +LL  M+QRG+ PN  TYN+L+DGFC   ++  
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++   M S GC  D +++NILINGYCK   +++ L L+REM  +G+    VTYNTL  
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +  ++E A KLF EM    V  D  +Y   +DGLC NG + +A+E+F  +   K EL
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y  +I G+C + ++  AW+LFCSLP   +  +   YNIMI  LC    + KA  LF
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M E   APD +T+++LI   +  ++ +   EL+ +MK      D S V +V+++L   
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626

Query: 571 EISLKSLPSFLVQER 585
           E+  KS    L   R
Sbjct: 627 ELD-KSFLDMLSTTR 640


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/538 (37%), Positives = 320/538 (59%), Gaps = 20/538 (3%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNL------ 96
           NV   ++AF +F  M+R  P P  V+SF+ LL ++   KHY +      LF  +      
Sbjct: 49  NVKCLDDAFSLFRQMVRTKPLPS-VASFSKLLKAMVHMKHYSS---VVSLFREIHKLRIP 104

Query: 97  ---YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
              +  +I++N  C + R  LGF       +     N  TF +LI+GL AE+++ +A  L
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHL 164

Query: 154 FTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           F KL +   CEPN + Y T++NGLC+ GHT  A +L   M  G+       KPNT TY+ 
Sbjct: 165 FKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNTRTYTI 218

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +ID  CK+G +D A +L  +MK ++I PD+ TY++LI  LC  + W   + LF+EM+   
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN 278

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+V TFN ++D LCK  K+++A  ++  M+++GV P+  TYN ++DG+ L G+++RA 
Sbjct: 279 IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAR 338

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E+F SM +   + D +SYNILINGY + K+++EA+ + RE+  KG+KP++VT N L  GL
Sbjct: 339 EIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGL 398

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           FE+ + + A   FDEM   G   D  T+ T + G  KNG + EA+  F  L   + + +I
Sbjct: 399 FELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNI 458

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           Q Y  +IDGLCK+G+L  A   F  LP   L P+V+TY  MI G C +G +D+A+D+   
Sbjct: 459 QIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRK 518

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           ME+N    D  T+++++ GF+R N+ S++   L ++  K    +A+ V +++D++ ++
Sbjct: 519 MEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 36/402 (8%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-------------- 268
           +D A +LF QM      P V +++ L+  + H   ++    LF E+              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 269 ---------------------MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
                                  +G+  + VTF  ++  L    K+ +A  L   +V+  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 308 V-RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           +  PN   Y T+M+G C  G   +A +L   ME    K +  +Y I+I+ +CK+  ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            SL  EM  K I P + TY+TL   L ++ Q E+   LF EM    +  +  T+ + IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G + +A E+ R +     + D+  YN +IDG    G++  A E+F S+ +  + P+
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +++YNI+I G     ++D+A  +  ++ +    P ++T ++L+HG   +           
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
           +M     +PD      ++    KN +  +++  F   ER+ E
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRE 454


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 341/595 (57%), Gaps = 50/595 (8%)

Query: 15  SAPISAFRS-NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL 73
           ++P+ + R   FS+    +R+  +R   ++ +  ++A  +F  M++  P P  V  FN L
Sbjct: 29  ASPLFSLRGVYFSAASYDYREKLSRNVLLD-LKLDDAVDLFGEMVQSRPLPSIVE-FNKL 86

Query: 74  LASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--- 124
           L+++AK   +D       R+    +  +LY+YNILINCFC+  ++ L     G++++   
Sbjct: 87  LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146

Query: 125 -------------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAA 152
                         C                   + PN  TFN+LI GL   ++  EA A
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++ A GC+P++ TY T++NGLC+ G   +AL+L ++M  G  E  VV       Y+T
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------IYTT 260

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           IID LC    V+ A  LF +M ++ I P+VVTYNSLI  LC+   W++A RL  +M+++ 
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+VVTF+ ++D   K  K+ EA +L D M++R + P+  TY++L++GFC+  +++ A+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +F  M S  C  + V+YN LI G+CK K VEE + L+REM  +G+    VTYNTL  GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F+    + A K+F +M  DGV  D  TY+  +DGLCK G + +A+ +F  L+  K E DI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN +I+G+CK+G+++  W+LFCSL    + PNV+ Y  MI G C  G  ++A  LF +
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           M+E+   P+  T++ LI   +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 183/370 (49%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  LF +M      P +V +N L+  +   N ++    L   M +  +   + ++N+
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  +L  M++ G  P+  T ++L++G+C   +I+ A  L   M  M 
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + V++N LI+G   + +  EA++L   MV++G +P + TY T+  GL +   ++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L  +M++  + AD   YTT ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + PNVVT++ +I     +G++ +A  L+ +M + +  PD+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T+  LI+GF   +   +   +   M  K   P+    + ++    K +   + +  F  
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 421 MSQRGLVGNT 430



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 36/278 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNIL 102
           EA  ++D M++     P + +++ L+        L + KH    + +   FPN+ TYN L
Sbjct: 343 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  FCK  RV  G   F  + +     N  T+N+LI+GL        A  +F K+ + G 
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
            P++ITY+ L++GLC+ G    AL +FE +     E         I  +CK         
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      PN + Y+T+I G C++G  ++A ALF +MK++   P+  TYN+LI    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
              D   +  L  EM   G      T +++++ L   R
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/554 (38%), Positives = 322/554 (58%), Gaps = 20/554 (3%)

Query: 1   MGLESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRM 60
           M L +    S S +    S+F  N S    H +  + +  D       +A   F+ ML M
Sbjct: 1   MSLPTRLRFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVD-------DAVSQFNRMLCM 53

Query: 61  HPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSL 114
             +PP +  FN +L S AK KHY T      RL   G+ P+L T NILINCFC +G+++ 
Sbjct: 54  RHTPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
           GF    +IL+  + P+  T N+LIKGL  + ++ +A     KL A G + N ++Y TLIN
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G+C+ G T  A+    ++       G + KP+ V Y+TIID +CK   V +A  LF +M 
Sbjct: 173 GVCKIGDTRAAIKFLRKID------GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMA 226

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + I+ DVVTYN+LI+G C      EA  L  EM+ + + P+V T+N+++D LCK  K+ 
Sbjct: 227 VKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  +L +M++  V+P+  TY+TLMDG+ L+ ++ +A+ +F +M  MG   D  +Y ILI
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           NG+CKNK V+EAL+L++EM  K + P +VTY++L  GL +  ++ +   L DEM+  G  
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQP 406

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
           AD  TY++ IDGLCKNG++  A+ LF  ++  +   +I  +  L+DGLCK GRLK A E+
Sbjct: 407 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  L       NV TYN+MI G C  G +++A  +   ME+N   P+  TF+ +I    +
Sbjct: 467 FQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFK 526

Query: 535 INEPSKVNELLHKM 548
            +E  K  +LL +M
Sbjct: 527 KDENDKAEKLLRQM 540



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 225/433 (51%), Gaps = 6/433 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+L    TP    FN ++           A +L  +L+  G +P++IT N LIN  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G      ++  ++            P+TVT +T+I GLC +G V KA     ++  +  
Sbjct: 107 MGQITFGFSVLAKILKRG------YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             + V+Y +LI+G+C   D   A +   ++  +  +P VV +N I+D +CK + + EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +G+  +  TYNTL+ GFC++GK+  A  L   M       +  +YNIL++  C
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V+EA S+   M+   +KP V+TY+TL  G F +++V+ A  +F+ M   GV  D  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I+G CKN  + EA+ LF+ +        I  Y+ LIDGLCKSGR+ + W+L   +
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  +V+TY+ +I GLC +G +D+A  LF  M++    P++ TF +L+ G  +    
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 539 SKVNELLHKMKEK 551
               E+   +  K
Sbjct: 461 KDAQEVFQDLLTK 473



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 191/360 (53%), Gaps = 18/360 (5%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVS 113
           + P V  +N ++ ++ K   Y     A GLF          ++ TYN LI  FC +G++ 
Sbjct: 195 TKPDVVMYNTIIDAMCK---YQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLK 251

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                   ++     PN  T+N L+  L  E ++ EA ++   +     +P+VITY+TL+
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +G         A ++F  M+     +GV   P+  TY+ +I+G CK   VD+A  LF +M
Sbjct: 312 DGYFLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEM 365

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             +N+ P +VTY+SLI GLC +   +    L  EM D+G    V+T++ ++D LCKN  +
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 425

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D A  L + M  + +RPN  T+  L+DG C  G++  A+E+F  + + G   +  +YN++
Sbjct: 426 DRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING+CK   +EEAL++  +M   G  P   T+ T+ + LF+  + + A KL  +M   G+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 177/348 (50%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A + F +M      P ++ +N ++        ++ A  L   +  +G+QP ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   ++     +L  +++RG  P+  T NTL+ G CL G++ +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + VSY  LING CK  +   A+   R++  +  KP VV YNT+   + +   V  A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF EM   G++AD  TY T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G++K A  +   +    + P+V+TY+ ++ G     ++ KA+ +F  M      PDV
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            T+ +LI+GF +     +   L  +M +K ++P     S ++D L K+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 159/322 (49%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           ++A   F  M+     P ++ FN I+D   K +    A  L   +  +G++P+  T N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ FC MG+I     +   +   G   D V+ N LI G C   +V++AL  + +++++G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +   V+Y TL  G+ +I     A+K   ++       D   Y T ID +CK   + EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           LF  + +     D+  YN LI G C  G+LK A  L   +    + PNV TYNI++  LC
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G++ +A+ +   M +    PDVIT+  L+ G+  + E  K   + + M    V PD  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 559 IVSIVVDLLVKNEISLKSLPSF 580
             +I+++   KN++  ++L  F
Sbjct: 341 TYTILINGFCKNKMVDEALNLF 362


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 341/595 (57%), Gaps = 50/595 (8%)

Query: 15  SAPISAFRS-NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL 73
           ++P+ + R   FS+    +R+  +R   ++ +  ++A  +F  M++  P P  V  FN L
Sbjct: 13  ASPLFSLRGVYFSAASYDYREKLSRNVLLD-LKLDDAVDLFGEMVQSRPLPSIVE-FNKL 70

Query: 74  LASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--- 124
           L+++AK   +D       R+    +  +LY+YNILINCFC+  ++ L     G++++   
Sbjct: 71  LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 130

Query: 125 -------------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAA 152
                         C                   + PN  TFN+LI GL   ++  EA A
Sbjct: 131 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 190

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++ A GC+P++ TY T++NGLC+ G   +AL+L ++M  G  E  VV       Y+T
Sbjct: 191 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------IYTT 244

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           IID LC    V+ A  LF +M ++ I P+VVTYNSLI  LC+   W++A RL  +M+++ 
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+VVTF+ ++D   K  K+ EA +L D M++R + P+  TY++L++GFC+  +++ A+
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +F  M S  C  + V+YN LI G+CK K VEE + L+REM  +G+    VTYNTL  GL
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F+    + A K+F +M  DGV  D  TY+  +DGLCK G + +A+ +F  L+  K E DI
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN +I+G+CK+G+++  W+LFCSL    + PNV+ Y  MI G C  G  ++A  LF +
Sbjct: 485 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 544

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           M+E+   P+  T++ LI   +R  + +   EL+ +M+    + DAS +S+V+++L
Sbjct: 545 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 183/370 (49%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  LF +M      P +V +N L+  +   N ++    L   M +  +   + ++N+
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  +L  M++ G  P+  T ++L++G+C   +I+ A  L   M  M 
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + V++N LI+G   + +  EA++L   MV++G +P + TY T+  GL +   ++ AL
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L  +M++  + AD   YTT ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + PNVVT++ +I     +G++ +A  L+ +M + +  PD+
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T+  LI+GF   +   +   +   M  K   P+    + ++    K +   + +  F  
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 405 MSQRGLVGNT 414



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 36/278 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNIL 102
           EA  ++D M++     P + +++ L+        L + KH    + +   FPN+ TYN L
Sbjct: 327 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 385

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  FCK  RV  G   F  + +     N  T+N+LI+GL        A  +F K+ + G 
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
            P++ITY+ L++GLC+ G    AL +FE +     E         I  +CK         
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      PN + Y+T+I G C++G  ++A ALF +MK++   P+  TYN+LI    
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
              D   +  L  EM   G      T +++++ L   R
Sbjct: 566 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/515 (38%), Positives = 299/515 (58%), Gaps = 12/515 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F++ML   P P  +    +L A +   ++YD       ++   GL PN+YT +I
Sbjct: 74  DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +NCFC++ RV LGF    ++++    P   TF +LI GL       +A  LF  + A G
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C+P+V TYNT+INGLC+ G T  A  L ++M          C+PN VTYST+ID LC++ 
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG------CQPNMVTYSTLIDSLCRDR 247

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++A  +F  MK + I+PD+ TY SLI GLC  + W EA  L  EM    + P +VTFN
Sbjct: 248 LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++D  CK  K+ EA  +L  M + GV PN  TY++LM G+ L   +  A +LF  M + 
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GCK +  SYNILINGYCK K ++EA+ L+ EM+ +G+ P  V+YNTL  G  ++ ++  A
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF  M  +G   D  TY+  +DG CK GY+ +A  LFR ++    + ++  Y  L+  
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +CKSG  K A +LF  L    L P+V  Y  +I GLC +G +D+A + F +ME +   PD
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            I+++++I G ++  + S+   L+ +M+++  + D
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 229/436 (52%), Gaps = 6/436 (1%)

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           +L  +++  G  PN+ T +  +N  C+     +  ++  ++      I +  +P  VT++
Sbjct: 114 SLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKV------IKLGLQPTIVTFT 167

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+GLCK G   +A  LF  M  +   PDV TYN++I+GLC   +   A  L  +M + 
Sbjct: 168 TLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA 227

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G QP++VT++ ++D LC++R ++EA  +   M  +G+ P+  TY +L+ G C   +   A
Sbjct: 228 GCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEA 287

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M S+    D V++N+L++ +CK  +V EAL + + M   G++P VVTY++L  G
Sbjct: 288 SALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYG 347

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
                 V  A KLF  M   G   +  +Y   I+G CK   I EA++LF  +       +
Sbjct: 348 YSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPN 407

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             +YN LI G C+ G+L+ A +LF ++     +P++ TY+I++ G C  G + KA  LF 
Sbjct: 408 NVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFR 467

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M+     P+++ + +L+H   +        +L  ++  + + P   + + +++ L K  
Sbjct: 468 AMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEG 527

Query: 572 ISLKSLPSFLVQERQG 587
           +  ++L +F   E  G
Sbjct: 528 LLDEALEAFRNMEADG 543



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 218/408 (53%), Gaps = 7/408 (1%)

Query: 164 PNVITYNTLINGLCRTGHTM-IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           P +I +  L++ + + G    + ++L ++M     E+ V   PN  T S  ++  C+   
Sbjct: 90  PCIIQFAKLLSAIVKMGQYYDVVISLSKQM-----EL-VGLSPNIYTLSIFMNCFCQLQR 143

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD   ++  ++    + P +VT+ +LI+GLC   ++ +A  LF +M+ +G QP V T+N 
Sbjct: 144 VDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT 203

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I++ LCK  +   A+ LL  M + G +PN  TY+TL+D  C    +N A ++F  M++ G
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG 263

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D  +Y  LI G CK    +EA +L  EM S  I P +VT+N L     +  +V  AL
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +   M   GV  +  TY++ + G      ++EA +LF  +    C+ +I +YN LI+G 
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK+ R+  A +LF  + H  L PN V+YN +I G C  G++ +A+DLF +M  N   PD+
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            T+ +L+ GF +     K   L   M+   + P+  + +I+V  + K+
Sbjct: 444 FTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKS 491



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 174/360 (48%), Gaps = 12/360 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +++ L+ SL +++  +  L+      A G+ P+++TY  LI   CK  R       
Sbjct: 231 PNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASAL 290

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  TFN L+     E ++ EA  +   +   G EPNV+TY++L+ G   
Sbjct: 291 LNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSL 350

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               + A  LF  M      I   CKPN  +Y+ +I+G CK   +D+A  LF +M  + +
Sbjct: 351 WTDVVEARKLFHVM------ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ V+YN+LIHG C      EA+ LF  M   G  P + T+++++D  CK   + +A R
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M    ++PN   Y  L+   C  G    A +LF  +   G +     Y  +ING C
Sbjct: 465 LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLC 524

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++EAL  +R M + G  P  ++YN +  GL +      AL L  EM+  G  AD R
Sbjct: 525 KEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 1/191 (0%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG-YIIEAVELFRTLRILKCELDIQAYN 456
           ++ AL  F+ M           +   +  + K G Y    + L + + ++    +I   +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
             ++  C+  R+   + +   +    L P +VT+  +I GLC  G+  +A +LF DM   
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              PDV T++ +I+G  +I E +    LL KM+E    P+    S ++D L ++ +  ++
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 577 LPSFLVQERQG 587
           L  F   + +G
Sbjct: 253 LDIFSYMKAKG 263


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/531 (39%), Positives = 315/531 (59%), Gaps = 13/531 (2%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
           NFSS L +           ++   ++A   F+ ML M  +PP +  FN +L S AK KHY
Sbjct: 17  NFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKMKHY 75

Query: 84  DT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            T      RL   G+ P+L T NILINCFC +G+++ GF    +IL+  + P+  T N+L
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           IKGL  + ++ +A     KL A G + N ++Y TLING+C+ G T  A+ L  ++     
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID---- 191

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
             G + KPN   YSTIID LCK   V +A  LF +M  + I+ DVVTY++LI+G C    
Sbjct: 192 --GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EA  L  EM+ + + P+V T+N+++D LCK  K+ EA  +L +M++  V+P+  TY+T
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           LMDG+ L+ ++ +A+ +F +M  MG   D  +Y ILING+CKNK V+EAL+L++EM  K 
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           + P +VTY++L  GL +  ++ +   L DEM+  G  AD  TY++ IDGLCKNG++  A+
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            LF  ++  +   +I  +  L+DGLCK GRLK A E+F  L       NV TYN+MI G 
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           C  G +++A  +   ME+N   P+  TF+ +I    + +E  K  +LL +M
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 225/433 (51%), Gaps = 6/433 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+L    TP    FN ++           A +L  +L+  G +P++IT N LIN  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G      ++  ++            P+TVT +T+I GLC +G V KA     ++  +  
Sbjct: 107 MGQITFGFSVLAKILKRG------YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             + V+Y +LI+G+C   D   A +L  ++  +  +P+V  ++ I+D LCK + + EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +G+  +  TY+TL+ GFC+ GK+  A  L   M       +  +YNIL++  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V+EA S+   M+   +KP V+TY+TL  G F +++V+ A  +F+ M   GV  D  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I+G CKN  + EA+ LF+ +        I  Y+ LIDGLCKSGR+ + W+L   +
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  +V+TY+ +I GLC +G +D+A  LF  M++    P++ TF +L+ G  +    
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 539 SKVNELLHKMKEK 551
               E+   +  K
Sbjct: 461 KDAQEVFQDLLTK 473



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 189/360 (52%), Gaps = 18/360 (5%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVS 113
           + P V  ++ ++ +L K   Y     A GLF          ++ TY+ LI  FC  G++ 
Sbjct: 195 TKPNVEMYSTIIDALCK---YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                   ++     PN  T+N L+  L  E ++ EA ++   +     +P+VITY+TL+
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +G         A ++F  M+     +GV   P+  TY+ +I+G CK   VD+A  LF +M
Sbjct: 312 DGYFLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKNKMVDEALNLFKEM 365

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             +N+ P +VTY+SLI GLC +        L  EM D+G    V+T++ ++D LCKN  +
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 425

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D A  L + M  + +RPN  T+  L+DG C  G++  A+E+F  + + G   +  +YN++
Sbjct: 426 DRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING+CK   +EEAL++  +M   G  P   T+ T+ + LF+  + + A KL  +M   G+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 178/348 (51%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A + F +M      P ++ +N ++        ++ A  L   +  +G+QP ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   ++     +L  +++RG  P+  T NTL+ G CL G++ +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + VSY  LING CK  +   A+ L R++  +  KP V  Y+T+   L +   V  A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF EM   G++AD  TY+T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G++K A  +   +    + P+V+TY+ ++ G     ++ KA+ +F  M      PDV
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            T+ +LI+GF +     +   L  +M +K ++P     S ++D L K+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 161/322 (50%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           ++A   F  M+     P ++ FN I+D   K +    A  L   +  +G++P+  T N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ FC MG+I     +   +   G   D V+ N LI G C   +V++AL  + +++++G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +   V+Y TL  G+ +I     A+KL  ++       +   Y+T ID LCK   + EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           LF  + +     D+  Y+ LI G C  G+LK A  L   +    + PNV TYNI++  LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G++ +A+ +   M +    PDVIT+  L+ G+  + E  K   + + M    V PD  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 559 IVSIVVDLLVKNEISLKSLPSF 580
             +I+++   KN++  ++L  F
Sbjct: 341 TYTILINGFCKNKMVDEALNLF 362


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/600 (35%), Positives = 337/600 (56%), Gaps = 56/600 (9%)

Query: 10  SFSFASAPISAFRSNFSSLLVH-FRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS 68
           SFSF       +R  FS    + +R+  +R G ++ +  ++A  +F  M++  P P  + 
Sbjct: 31  SFSFF------WRRAFSGKTSYDYREKLSRNG-LSELKLDDAVALFGEMVKSRPFPSIIE 83

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            F+ LL+++AK   +D       ++   G+  N YTY+ILINCFC+  ++ L     G++
Sbjct: 84  -FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142

Query: 123 LR-----------------------------------SCFTPNAATFNSLIKGLHAESRI 147
           ++                                   + + PN  TFN+LI GL   ++ 
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
            EA AL  ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E      P  
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGV 256

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           + Y+TIIDGLCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A RL  +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+++ + P V TF+ ++D   K  K+ EA +L D MV+R + P+  TY++L++GFC+  +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A+++F  M S  C  D V+YN LI G+CK K VEE + ++REM  +G+    VTYN 
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GLF+    + A ++F EM  DGV  +  TY T +DGLCKNG + +A+ +F  L+  K
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E  I  YN +I+G+CK+G+++  W+LFC+L    + P+VV YN MI G C  G  ++A 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF +M+E+   P+   ++ LI   +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 233/451 (51%), Gaps = 6/451 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +++S   P+   F+ L+  +   ++     +L  +++  G   N  TY+ LIN  CR
Sbjct: 69  FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +AL +  +M     E      PN VT S++++G C    + +A AL  QM     
Sbjct: 129 RSQLPLALAVLGKMMKLGYE------PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VT+N+LIHGL   N  +EA  L   M+ +G QP +VT+ V+++ LCK    D A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ M Q  + P    YNT++DG C    ++ A  LF  ME+ G + + V+Y+ LI+  C
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 +A  L  +M+ + I P V T++ L     +  ++  A KL+DEM +  +     
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY++ I+G C +  + EA ++F  +    C  D+  YN LI G CK  R++   E+F  +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               LV N VTYNI+IQGL   G  D A+++F +M  +   P+++T++ L+ G  +  + 
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            K   +   ++  K+ P     +I+++ + K
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 234/444 (52%), Gaps = 6/444 (1%)

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
           +E ++ +A ALF ++      P++I ++ L++ + +     + ++L E+M N    +G+ 
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
              N  TYS +I+  C+   +  A A+  +M      P++VT +SL++G CH+   +EA 
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            L  +M   G QP+ VTFN ++  L  + K  EA  L+D MV +G +P+  TY  +++G 
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G  + A  L   ME    +   + YN +I+G CK K +++AL+L++EM +KGI+P V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY++L   L    +   A +L  +M    +  D  T++  ID   K G ++EA +L+  
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +     +  I  Y+ LI+G C   RL  A ++F  +      P+VVTYN +I+G C   +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +++  ++F +M +     + +T+++LI G  +  +     E+  +M    V P+    + 
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 563 VVDLLVKNEISLKSLPSFLVQERQ 586
           ++D L KN    K++  F   +R 
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRS 495



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 186/370 (50%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G+  +  T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  +L  M++ G  PN  T ++L++G+C   +I+ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + V++N LI+G   + +  EA++L   MV+KG +P +VTY  +  GL +    + A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M++  +      Y T IDGLCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + P+V T++ +I     +G++ +A  L+ +M + +  P +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +T+  LI+GF   +   +  ++   M  K   PD    + ++    K +   + +  F  
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 422 MSQRGLVGNT 431



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 13/250 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F++M+  H   P V ++N L+    K K  +        ++  GL  N  TYNI
Sbjct: 378 DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI    + G   +    F  ++     PN  T+N+L+ GL    ++ +A  +F  L+   
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP + TYN +I G+C+ G      +LF  ++      GV  KP+ V Y+T+I G C++G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 550

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++A ALF +MK++   P+   YN+LI       D   +  L  EM   G      T  
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610

Query: 282 VIMDELCKNR 291
           ++ + L   R
Sbjct: 611 LVTNMLHDGR 620



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP + ++N LL  L KN   +        L  + + P +YTYNI+I   CK G+V  G+ 
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  +      P+   +N++I G   +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST--IIDGLCKEGFVD 224
           R G    +  L +EM +     G     +T+   T  + DG   + F+D
Sbjct: 583 RDGDREASAELIKEMRS----CGFAGDASTIGLVTNMLHDGRLDKSFLD 627


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/591 (34%), Positives = 332/591 (56%), Gaps = 49/591 (8%)

Query: 18   ISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL 77
            +S  R+        +R+  +R G ++ +  ++A  +F  M++  P P  +  F+ LL+++
Sbjct: 648  LSLLRAFSGKTSYDYREKLSRNG-LSELKLDDAVALFGEMVKSRPFPSIIE-FSKLLSAI 705

Query: 78   AKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR------- 124
            AK   +D       ++   G+  N YTY+ILINCFC+  ++ L     G++++       
Sbjct: 706  AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 765

Query: 125  ----------------------------SCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
                                        + + PN  TFN+LI GL   ++  EA AL  +
Sbjct: 766  VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 825

Query: 157  LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
            + A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E      P  + Y+TIIDG
Sbjct: 826  MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVLIYNTIIDG 879

Query: 217  LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
            LCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A RL  +M+++ + P 
Sbjct: 880  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939

Query: 277  VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            V TF+ ++D   K  K+ EA +L D MV+R + P+  TY++L++GFC+  +++ A+++F 
Sbjct: 940  VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999

Query: 337  SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
             M S  C  D V+YN LI G+CK K VEE + ++REM  +G+    VTYN L  GLF+  
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059

Query: 397  QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
              + A ++F EM  DGV  +  TY T +DGLCKNG + +A+ +F  L+  K E  I  YN
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119

Query: 457  CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
             +I+G+CK+G+++  W+LFC+L    + P+VV YN MI G C  G  ++A  LF +M+E+
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179

Query: 517  AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
               P+   ++ LI   +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 1230



 Score =  321 bits (822), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 174/487 (35%), Positives = 274/487 (56%), Gaps = 51/487 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNAT 90
           TR  DI +   N+A  +F  M++  P P  V  FN LL+++ K K YD       ++   
Sbjct: 162 TRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISLGKKMEVL 217

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +LYT+NI+INCFC   +VSL     G++L+                          
Sbjct: 218 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK-------------------------- 251

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                     G EP+ +T  +L+NG CR      A++L ++M     EIG   KP+ V Y
Sbjct: 252 ---------LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVAY 296

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + IID LCK   V+ A   F +++ + I P+VVTY +L++GLC+++ W++A RL  +M+ 
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P+V+T++ ++D   KN K+ EA  L + MV+  + P+  TY++L++G CL  +I+ 
Sbjct: 357 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 416

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++F  M S GC  D VSYN LING+CK K VE+ + L+REM  +G+    VTYNTL  
Sbjct: 417 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 476

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G F+   V+ A + F +M   G++ D  TY   + GLC NG + +A+ +F  ++  + +L
Sbjct: 477 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 536

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y  +I G+CK+G+++ AW LFCSL    L P++VTY  M+ GLC  G + +   L+
Sbjct: 537 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 596

Query: 511 LDMEENA 517
             M++  
Sbjct: 597 TKMKQEG 603



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 233/451 (51%), Gaps = 6/451 (1%)

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            FG +++S   P+   F+ L+  +   ++     +L  +++  G   N  TY+ LIN  CR
Sbjct: 683  FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 742

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 +AL +  +M     E      PN VT S++++G C    + +A AL  QM     
Sbjct: 743  RSQLPLALAVLGKMMKLGYE------PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             P+ VT+N+LIHGL   N  +EA  L   M+ +G QP +VT+ V+++ LCK    D A  
Sbjct: 797  QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856

Query: 299  LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            LL+ M Q  + P    YNT++DG C    ++ A  LF  ME+ G + + V+Y+ LI+  C
Sbjct: 857  LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916

Query: 359  KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                  +A  L  +M+ + I P V T++ L     +  ++  A KL+DEM +  +     
Sbjct: 917  NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 976

Query: 419  TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            TY++ I+G C +  + EA ++F  +    C  D+  YN LI G CK  R++   E+F  +
Sbjct: 977  TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036

Query: 479  PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                LV N VTYNI+IQGL   G  D A+++F +M  +   P+++T++ L+ G  +  + 
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 1096

Query: 539  SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             K   +   ++  K+ P     +I+++ + K
Sbjct: 1097 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 155/602 (25%), Positives = 285/602 (47%), Gaps = 59/602 (9%)

Query: 29   LVHFRDLTTREGDINVIT-------------PNEAFCIFDYMLRMHPSPPPVSSFNILLA 75
            LV F D+  RE D++++T               EA+ +F   L +    P + ++  +++
Sbjct: 523  LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF-CSLSLKGLKPDIVTYTTMMS 581

Query: 76   SLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
             L         +   T++   GL  N        +C    G ++L      ++L   + P
Sbjct: 582  GLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAP 633

Query: 130  N---------AATFNSLIKGLH----------------AESRIMEAAALFTKLKAFGCEP 164
            +              SL++                   +E ++ +A ALF ++      P
Sbjct: 634  SLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFP 693

Query: 165  NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
            ++I ++ L++ + +     + ++L E+M N    +G+    N  TYS +I+  C+   + 
Sbjct: 694  SIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI--PHNHYTYSILINCFCRRSQLP 747

Query: 225  KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
             A A+  +M      P++VT +SL++G CH+   +EA  L  +M   G QP+ VTFN ++
Sbjct: 748  LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807

Query: 285  DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              L  + K  EA  L+D MV +G +P+  TY  +++G C  G  + A  L   ME    +
Sbjct: 808  HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867

Query: 345  HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
               + YN +I+G CK K +++AL+L++EM +KGI+P VVTY++L   L    +   A +L
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 405  FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
              +M    +  D  T++  ID   K G ++EA +L+  +     +  I  Y+ LI+G C 
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 465  SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
              RL  A ++F  +      P+VVTYN +I+G C   ++++  ++F +M +     + +T
Sbjct: 988  HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047

Query: 525  FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
            +++LI G  +  +     E+  +M    V P+    + ++D L KN    K++  F   +
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 1107

Query: 585  RQ 586
            R 
Sbjct: 1108 RS 1109



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 219/411 (53%), Gaps = 6/411 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ +A  LF+ +      P+++ +N L++ + +     + ++L ++M      +G+  + 
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RN 221

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  T++ +I+  C    V  A ++  +M      PD VT  SL++G C  N  ++A  L 
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G +P +V +N I+D LCK +++++A      + ++G+RPN  TY  L++G C  
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            + + A  L   M       + ++Y+ L++ + KN +V EA  L+ EMV   I P +VTY
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L  GL    +++ A ++FD M   G  AD  +Y T I+G CK   + + ++LFR +  
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                +   YN LI G  ++G +  A E F  +    + P++ TYNI++ GLC++G+++K
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A  +F DM++     D++T+  +I G  +  +  +   L   +  K + PD
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/560 (23%), Positives = 261/560 (46%), Gaps = 46/560 (8%)

Query: 79   KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            K + + ++++  G+ P+++TYNIL+   C  G +    + F  + +     +  T+ ++I
Sbjct: 486  KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545

Query: 139  KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN---- 194
            +G+    ++ EA +LF  L   G +P+++TY T+++GLC  G       L+ +M      
Sbjct: 546  RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 605

Query: 195  ------GNGEIGVV---------CKPNTVTYSTIIDGLCKEGF----------------- 222
                   +G+I +          C         I  G+CK+                   
Sbjct: 606  KNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREK 665

Query: 223  ----------VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
                      +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G
Sbjct: 666  LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 725

Query: 273  VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +  +  T++++++  C+  ++  A  +L  M++ G  PN  T ++L++G+C   +I+ A 
Sbjct: 726  IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 785

Query: 333  ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
             L   M   G + + V++N LI+G   + +  EA++L   MV+KG +P +VTY  +  GL
Sbjct: 786  ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845

Query: 393  FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
             +    + A  L ++M++  +      Y T IDGLCK  ++ +A+ LF+ +       ++
Sbjct: 846  CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905

Query: 453  QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
              Y+ LI  LC  GR   A  L   +    + P+V T++ +I     +G++ +A  L+ +
Sbjct: 906  VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965

Query: 513  MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            M + +  P ++T+  LI+GF   +   +  ++   M  K   PD    + ++    K + 
Sbjct: 966  MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025

Query: 573  SLKSLPSFLVQERQGEVGES 592
              + +  F    ++G VG +
Sbjct: 1026 VEEGMEVFREMSQRGLVGNT 1045



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 198/380 (52%), Gaps = 6/380 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF +M            P+ V ++ ++  + K    D   +L  +M+   I  D+ T
Sbjct: 172 AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 225

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N +I+  C     + A  +  +M+  G +P  VT   +++  C+  ++ +A  L+D MV
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G +P+   YN ++D  C   ++N A + F  +E  G + + V+Y  L+NG C +    
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L  +M+ K I P V+TY+ L     +  +V  A +LF+EM R  +  D  TY++ I
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLC +  I EA ++F  +    C  D+ +YN LI+G CK+ R++   +LF  +    LV
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N VTYN +IQG    G +DKA++ F  M+    +PD+ T+++L+ G     E  K   +
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 545 LHKMKEKKVMPDASIVSIVV 564
              M+++++  D    + V+
Sbjct: 526 FEDMQKREMDLDIVTYTTVI 545



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 185/365 (50%), Gaps = 1/365 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++ A  LF  M      P +V +N L+  +     ++    L  +M   G++  + TFN+
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   ++  A  +L  M++ G  P+  T  +L++GFC   +++ A  L   M  +G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D V+YN +I+  CK K V +A   ++E+  KGI+P VVTY  L  GL    +   A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M +  +  +  TY+  +D   KNG ++EA ELF  +  +  + DI  Y+ LI+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C   R+  A ++F  +     + +VV+YN +I G C   +++    LF +M +     + 
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL- 581
           +T++ LI GF +  +  K  E   +M    + PD    +I++  L  N    K+L  F  
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 582 VQERQ 586
           +Q+R+
Sbjct: 529 MQKRE 533



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%)

Query: 276 SVVTFNVIMDELCKNR----KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           S V+   + + L K R    K+++A  L   MV+    P+   +N L+     + K +  
Sbjct: 148 SSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV 207

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   ME +G ++D  ++NI+IN +C   +V  ALS+  +M+  G +P  VT  +L  G
Sbjct: 208 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG 267

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
               ++V  A+ L D+M   G   D   Y   ID LCK   + +A + F+ +       +
Sbjct: 268 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 327

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  L++GLC S R   A  L   +    + PNV+TY+ ++     +G++ +A++LF 
Sbjct: 328 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 387

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +M   +  PD++T+  LI+G    +   + N++   M  K  + D
Sbjct: 388 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 13/250 (5%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            +EA  +F++M+  H   P V ++N L+    K K  +        ++  GL  N  TYNI
Sbjct: 992  DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            LI    + G   +    F  ++     PN  T+N+L+ GL    ++ +A  +F  L+   
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             EP + TYN +I G+C+ G      +LF  ++      GV  KP+ V Y+T+I G C++G
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 1164

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              ++A ALF +MK++   P+   YN+LI       D   +  L  EM   G      T  
Sbjct: 1165 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 1224

Query: 282  VIMDELCKNR 291
            ++ + L   R
Sbjct: 1225 LVTNMLHDGR 1234



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 64   PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
            PP + ++N LL  L KN   +        L  + + P +YTYNI+I   CK G+V  G+ 
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 1136

Query: 118  AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             F  +      P+   +N++I G   +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 1137 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 1196

Query: 178  RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST--IIDGLCKEGFVD 224
            R G    +  L +EM +     G     +T+   T  + DG   + F+D
Sbjct: 1197 RDGDREASAELIKEMRS----CGFAGDASTIGLVTNMLHDGRLDKSFLD 1241


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/587 (37%), Positives = 346/587 (58%), Gaps = 33/587 (5%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           N  F+F   P S+ + NF S   +    TT   + +V   ++A  +F+ +LR + +PP  
Sbjct: 35  NTHFNFI--PYSSSKINFIS---YSSTSTTFHSNNDV---DDAVSLFNRLLRRNTTPPAF 86

Query: 68  SSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
             FN +L SL K+KHY T      ++   G+ PNL   NILINCFC++G +   F  F +
Sbjct: 87  E-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAK 145

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL+  + P+  TF +LIKGL  + +I +A     K+ A G   + I+Y TLI+GLC+ G 
Sbjct: 146 ILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGE 205

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           T  AL+L + + +GN     + +PN V Y+TIID +CK   V++A  LF +M  + I+PD
Sbjct: 206 TRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPD 259

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VVTY++LI G C     N+A  LF +M+ + ++P V TFN++++  CK+ KM E   + D
Sbjct: 260 VVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFD 319

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           +M+++G++PN  TYN+LMDG+CL+ ++N+A+ +F +M   G   D  SY+I+ING+CK K
Sbjct: 320 MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIK 379

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           + +EA++L++EM  K I P VVTY++L  GL +  ++ +AL+L D+M   GV    RTY 
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYN 439

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +D LCK   + +A+ L   L+    + ++  Y+ LI GLC+SG+L+ A ++F     G
Sbjct: 440 SILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVF----EG 495

Query: 482 VLVP----NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +LV     NV TY IMIQG C +G  ++A  L   ME+N   PD  T++++I    + +E
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
                +LL +M  + V P      I +    K E  + S P  L ++
Sbjct: 556 NDMAEKLLREMIARGVRPR----QIAIWFQKKKEYDVSSEPKTLTEQ 598



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 131/277 (47%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  +Y++    F     ++ A  LF  +           +N ++    K+K     L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           ++M  +GIKP +V  N L     ++  +  A  +F ++ + G   DT T+TT I GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I +A      +  L    D  +Y  LI GLCK G  + A +L   +   ++ PNVV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +I  +C    +++A DLF +M     +PDV+T+  LI GF  + + +   +L +KM  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           + + PD    +I+V+   K+    +    F +  +QG
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/608 (34%), Positives = 340/608 (55%), Gaps = 52/608 (8%)

Query: 1   MGLESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRM 60
           +G   C     SF+    S +  +FS +   +R ++     +N +  ++A  +F  M++ 
Sbjct: 20  LGKGKCGTAPPSFSHC--SFWVRDFSGVRYDYRKISINR--LNDLKLDDAVNLFGDMVKS 75

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSL 114
            P P  V  F+ LL+++AK   +D       ++   G+  NLYTY+ILINCFC+  ++SL
Sbjct: 76  RPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSL 134

Query: 115 GFIAF-----------------------------------GRILRSCFTPNAATFNSLIK 139
                                                   G+++   + P++ TFN+LI 
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           GL   +R  EA AL  ++   GC+P+++TY  ++NGLC+ G   +AL+L ++M  G  E 
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE- 253

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                P  V Y+TIID LC    V+ A  LF +M ++ I P+VVTYNSLI  LC+   W+
Sbjct: 254 -----PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +A RL  +M+++ + P+VVTF+ ++D   K  K+ EA +L D M++R + P+  TY++L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           +GFC+  +++ A+ +F  M S  C  + V+YN LI G+CK K V+E + L+REM  +G+ 
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
              VTY TL  G F+  + ++A  +F +M  DGV  D  TY+  +DGLC NG +  A+ +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  L+  K E DI  YN +I+G+CK+G+++  W+LFCSL    + PNVVTY  M+ G C 
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G  ++A  LF +M+E    PD  T++ LI   +R  + +   EL+ +M+  + + DAS 
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608

Query: 560 VSIVVDLL 567
           + +V ++L
Sbjct: 609 IGLVTNML 616



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 222/425 (52%), Gaps = 6/425 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ +A  LF  +      P+++ ++ L++ + +     + ++L E+M N    +G+    
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 114

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  TYS +I+  C+   +  A A+  +M      PD+VT NSL++G CH N  ++A  L 
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G QP   TFN ++  L ++ +  EA  L+D MV +G +P+  TY  +++G C  
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G I+ A  L   ME    +   V YN +I+  C  K V +AL+L+ EM +KGI+P VVTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N+L   L    +   A +L  +M    +  +  T++  ID   K G ++EA +L+  +  
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              + DI  Y+ LI+G C   RL  A  +F  +      PNVVTYN +I+G C   ++D+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +LF +M +     + +T+  LIHGF +  E      +  +M    V+PD    SI++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474

Query: 566 LLVKN 570
            L  N
Sbjct: 475 GLCNN 479



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 225/451 (49%), Gaps = 6/451 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +++S   P+   F+ L+  +   ++     +L  +++  G   N+ TY+ LIN  CR
Sbjct: 69  FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +AL +  +M     E      P+ VT +++++G C    +  A +L  QM +   
Sbjct: 129 RSQLSLALAVLAKMMKLGYE------PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  T+N+LIHGL   N  +EA  L   M+ +G QP +VT+ ++++ LCK   +D A  
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M Q  + P    YNT++D  C    +N A  LF  M++ G + + V+YN LI   C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 +A  L  +M+ + I P VVT++ L     +  ++  A KL+DEM +  +  D  
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY++ I+G C +  + EA  +F  +    C  ++  YN LI G CK+ R+    ELF  +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               LV N VTY  +I G     + D A+ +F  M  +   PD++T+ +L+ G     + 
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                +   ++  K+ PD    +I+++ + K
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/580 (35%), Positives = 333/580 (57%), Gaps = 22/580 (3%)

Query: 11  FSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSF 70
           F+++ AP   + +N  S+ V      + E + NV   ++AF +F  M+   P P  VS F
Sbjct: 19  FAYSIAP-RHYSTNTCSISVKGNFGVSNEFE-NVKCLDDAFSLFRQMVTTKPLPSAVS-F 75

Query: 71  NILLASLAKNKHYDTRLNATGLFPNLYTYNILINCF---------CKIGRVSLGFIAFGR 121
           + LL +L   KHY +      +F  ++   I ++ F         C + R  LGF     
Sbjct: 76  SKLLKALVHMKHYSS---VVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAI 132

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTG 180
             +     N  TF +LI+GL AE+++ +A  LF KL +   CEP+ + Y T+++GLC+ G
Sbjct: 133 HFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKG 192

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           HT  A +L   M  G      + KP+T  Y+ +ID  CK+G +D A +L  +MK +NI P
Sbjct: 193 HTQKAFDLLRLMEQG------ITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPP 246

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D++TY SLI GL   + W + + LF+EM+   + P V TFN ++D LCK  K+++A  ++
Sbjct: 247 DIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIM 306

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M+++GV PN  TYN +MDG+CL G++ RA  +F SM   G + D +SY  LINGY + 
Sbjct: 307 TYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEK 366

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K++++A+ L+RE+   G+KP++VT + L  GLFE+ + E A   FDEMQ  G   +  T+
Sbjct: 367 KKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTH 426

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T + G  KNG + EA+  F  L   + + +IQ Y  +I+GLCK+G+L  A   F  LP 
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPL 486

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+V+TY  MI G C +G +D+A+D+   ME+N   PD  T+++++ GF R ++ S+
Sbjct: 487 IGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSE 546

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +   L ++  K    +A+ V +++D++ ++   L  +P F
Sbjct: 547 MKAFLKEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEF 586



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 182/385 (47%), Gaps = 1/385 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V++S ++  L          ++F ++    I  D    +++++  C  +  +    +
Sbjct: 70  PSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSV 129

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV-RPNACTYNTLMDGFC 323
                 +G+  + VTF  ++  L    K+ +A  L   +V+  +  P+   Y T+MDG C
Sbjct: 130 LAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLC 189

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G   +A +L   ME    K D   YNI+I+ +CK+  ++ A SL  EM  K I P ++
Sbjct: 190 KKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDII 249

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY +L  GL ++ Q E    LF EM    +  D  T+ + IDGLCK G + +A E+   +
Sbjct: 250 TYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYM 309

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                E +   YN ++DG C  G++  A  +F S+    + P++++Y  +I G     +M
Sbjct: 310 IEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKM 369

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           DKA  LF ++ +N   P ++T  +L+ G   +           +M+    +P+      +
Sbjct: 370 DKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTL 429

Query: 564 VDLLVKNEISLKSLPSFLVQERQGE 588
           +    KN +  +++  F   ER+ E
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRRE 454


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/600 (34%), Positives = 336/600 (56%), Gaps = 56/600 (9%)

Query: 10  SFSFASAPISAFRSNFSSLLVH-FRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS 68
           SFSF       +R  FS    + +R+  +R G ++ +  ++A  +F  M++  P P  + 
Sbjct: 31  SFSFF------WRRAFSGKTSYDYREKLSRNG-LSELKLDDAVALFGEMVKSRPFPSIIE 83

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            F+ LL+++AK   +D       ++   G+  N YTY+ILINCFC+  ++ L     G++
Sbjct: 84  -FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKM 142

Query: 123 LR-----------------------------------SCFTPNAATFNSLIKGLHAESRI 147
           ++                                   + + PN  TFN+LI GL   ++ 
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
            EA AL  ++ A GC+P+++TY  ++NGLC+ G T +A  L  +M  G  E      P  
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE------PGV 256

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           + Y+TIIDGLCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A RL  +
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+++ + P V TF+ ++D   K  K+ EA +L D MV+R + P+  TY++L++GFC+  +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A+++F  M S  C  D VSY+ LI G+CK K V+E + L+REM  +G+    VTY T
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GLF+    + A ++F EM  DGV  +  TY T +DGLCKNG + +A+ +F  L+  K
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E  I  YN +I+G+CK+G+++  W+LFC+L    + P+VV YN MI G C  G  ++A 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF +M+E+   P+   ++ LI   +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 232/444 (52%), Gaps = 6/444 (1%)

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
           +E ++ +A ALF ++      P++I ++ L++ + +     + ++L E+M N    +G+ 
Sbjct: 58  SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGM- 112

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
              N  TYS +I+  C+   +  A A+  +M      P++VT +SL++G CH+   +EA 
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            L  +M   G QP+ VTFN ++  L  + K  EA  L+D MV +G +P+  TY  +++G 
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G  + A  L   ME    +   + Y  +I+G CKNK +++AL+L++EM +KGI+P V
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY++L   L    +   A +L  +M    +  D  T++  ID   K G ++EA +L+  
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +     +  I  Y+ LI+G C   RL  A ++F  +      P+VV+Y+ +I+G C   +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D+  +LF +M +     + +T+  LI G  +  +     E+  +M    V P+    + 
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 563 VVDLLVKNEISLKSLPSFLVQERQ 586
           ++D L KN    K++  F   +R 
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRS 495



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 188/370 (50%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A ALF +M      P ++ ++ L+  +   N ++    L  +M + G+  +  T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  +L  M++ G  PN  T ++L++G+C   +I+ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + V++N LI+G   + +  EA++L   MV+KG +P +VTY  +  GL +    + A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M++  +      YTT IDGLCKN ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + P+V T++ +I     +G++ +A  L+ +M + +  P +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +T+  LI+GF   +   +  ++   M  K   PD    S ++    K +   + +  F  
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 422 MSQRGLVGNT 431



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 13/250 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F++M+  H   P V S++ L+    K K  D        ++  GL  N  TY  
Sbjct: 378 DEAKQMFEFMVSKH-CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI    + G   +    F  ++     PN  T+N+L+ GL    ++ +A  +F  L+   
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP + TYN +I G+C+ G      +LF  ++      GV  KP+ V Y+T+I G C++G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 550

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++A ALF +MK++   P+   YN+LI       D   +  L  EM   G      T  
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610

Query: 282 VIMDELCKNR 291
           ++ + L   R
Sbjct: 611 LVTNMLHDGR 620



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP + ++N LL  L KN   +        L  + + P +YTYNI+I   CK G+V  G+ 
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  +      P+   +N++I G   +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST--IIDGLCKEGFVD 224
           R G    +  L +EM +     G     +T+   T  + DG   + F+D
Sbjct: 583 RDGDREASAELIKEMRS----CGFAGDASTIGLVTNMLHDGRLDKSFLD 627


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/590 (36%), Positives = 331/590 (56%), Gaps = 51/590 (8%)

Query: 26  SSLLVHFRDLTTRE---GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH 82
           + ++ + R+L+ RE     +  I  ++A  +F  M+   P P  V  F+ L +++AK K 
Sbjct: 143 ARMVANDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPT-VIDFSRLFSAIAKTKQ 201

Query: 83  YD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           YD       ++   G+  NLYT +I+INCFC+  ++ L F A G+I++  + PN  TF++
Sbjct: 202 YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 261

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           LI GL  E R+ EA  L  ++   G +P++IT NTL+NGLC +G    A+ L ++M    
Sbjct: 262 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV--- 318

Query: 197 GEIGVVCKPNTVTY-----------------------------------STIIDGLCKEG 221
            E G  C+PN VTY                                   S IIDGLCK G
Sbjct: 319 -EYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 375

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  LF +M+ + I  +++TYN LI G C+A  W++  +L  +M+ + + P+VVTF+
Sbjct: 376 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 435

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++D   K  K+ EA  L   M+ RG+ P+  TY +L+DGFC    +++A ++   M S 
Sbjct: 436 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 495

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  +  ++NILINGYCK   +++ L L+R+M  +G+    VTYNTL  G  E+ ++  A
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +LF EM    V  +  TY   +DGLC NG   +A+E+F  +   K ELDI  YN +I G
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 615

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +C + ++  AW+LFCSLP   + P V TYNIMI GLC  G + +A  LF  MEE+  APD
Sbjct: 616 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 675

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             T+++LI   +   + +K  +L+ ++K      DAS + +V+D+L  ++
Sbjct: 676 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 209/417 (50%), Gaps = 6/417 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P VI ++ L + + +T    + L L ++M     E+  +   N  T S +I+  C+   +
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKL 237

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             A +   ++      P+ +T+++LI+GLC     +EA  L   M++ G +P ++T N +
Sbjct: 238 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 297

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++ LC + K  EA  L+D MV+ G +PNA TY  +++  C  G+   A EL   ME    
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 357

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K D V Y+I+I+G CK+  ++ A +L+ EM  KGI   ++TYN L  G     + +   K
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  +M +  +  +  T++  ID   K G + EA EL + +       D   Y  LIDG C
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K   L  A ++   +      PN+ T+NI+I G C   ++D   +LF  M       D +
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           T++ LI GF  + + +   EL  +M  +KV P+     I++D L  N  S K+L  F
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 594


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/584 (35%), Positives = 333/584 (57%), Gaps = 50/584 (8%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
           FSS    +R++  R G ++ +  ++A  +F  M++  P P  V  FN LL+++AK K +D
Sbjct: 8   FSSGSGDYREIL-RNG-LHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFD 64

Query: 85  T------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-------------- 124
                  ++    +   LYTYNILINCFC+  ++SL     G++++              
Sbjct: 65  VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 124

Query: 125 ---------------------SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
                                  + P+  TF +LI GL   ++  EA AL  ++   GC+
Sbjct: 125 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 184

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN++TY  ++NGLC+ G T +ALNL  +M     E  VV       ++TIID LCK   V
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV------IFNTIIDSLCKYRHV 238

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A  LF +M+ + I P+VVTY+SLI  LC    W++A +L  +M+++ + P++VTFN +
Sbjct: 239 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D   K  K  EA +L D M++R + P+  TYN+L++GFC+  ++++A+++F  M S  C
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V+YN LI G+CK+K VE+   L+REM  +G+    VTY TL  GLF     ++A K
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 418

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F +M  DGV  D  TY+  +DGLC NG + +A+E+F  ++  + +LDI  Y  +I+G+C
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 478

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K+G++   W+LFCSL    + PNVVTYN MI GLC+   + +A  L   M+E+   P+  
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 538

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           T++ LI   +R  + +   EL+ +M+  + + DAS + +V ++L
Sbjct: 539 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 582



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 230/451 (50%), Gaps = 6/451 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +++S   P+   FN L+  +    +     +L  K++       + TYN LIN  CR
Sbjct: 35  FGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCR 94

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +AL L  +M     E      P+ VT S++++G C    +  A AL  QM +   
Sbjct: 95  RSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 148

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +T+ +LIHGL   N  +EA  L   M+ +G QP++VT+ V+++ LCK    D A  
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 208

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ M    +  +   +NT++D  C    ++ A  LF  ME+ G + + V+Y+ LI+  C
Sbjct: 209 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 268

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 +A  L  +M+ K I P +VT+N L     +  +   A KL+D+M +  +  D  
Sbjct: 269 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 328

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + ++G C +  + +A ++F  +    C  D+  YN LI G CKS R++   ELF  +
Sbjct: 329 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 388

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            H  LV + VTY  +IQGL +DG  D A+ +F  M  +   PD++T+ +L+ G     + 
Sbjct: 389 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 448

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            K  E+   M++ ++  D  I + +++ + K
Sbjct: 449 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 8/455 (1%)

Query: 127 FTPNAATFNSLIK-GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           F+  +  +  +++ GLH + ++ +A  LF  +      P+++ +N L++ + +     + 
Sbjct: 8   FSSGSGDYREILRNGLH-DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 66

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           ++L E+M       G+       TY+ +I+  C+   +  A AL  +M      P +VT 
Sbjct: 67  ISLGEKMQRLEIVHGLY------TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 120

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           +SL++G CH    ++A  L  +M++ G +P  +TF  ++  L  + K  EA  L+D MVQ
Sbjct: 121 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 180

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RG +PN  TY  +++G C  G  + A  L   ME+   + D V +N +I+  CK + V++
Sbjct: 181 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 240

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           AL+L++EM +KGI+P VVTY++L   L    +   A +L  +M    +  +  T+   ID
Sbjct: 241 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 300

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
              K G  +EA +L+  +     + DI  YN L++G C   RL  A ++F  +      P
Sbjct: 301 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 360

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +VVTYN +I+G C   +++   +LF +M       D +T+  LI G     +     ++ 
Sbjct: 361 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 420

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            +M    V PD    SI++D L  N    K+L  F
Sbjct: 421 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 455



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 182/370 (49%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  LF  M      P +V +N L+  +     ++    L  +M    +   + T+N+
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  LL  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D +++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +    + AL
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M+   + AD   + T ID LCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A +L   +    + PN+VT+N +I     +G+  +A  L+ DM + +  PD+
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T++ L++GF   +   K  ++   M  K   PD    + ++    K++        F  
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 583 QERQGEVGES 592
              +G VG++
Sbjct: 388 MSHRGLVGDT 397



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 1/236 (0%)

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL NG   + ++++A+ L+  MV     P++V +N L   + ++ + +  + L ++MQR 
Sbjct: 18  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            +     TY   I+  C+   I  A+ L   +  L  E  I   + L++G C   R+  A
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   +      P+ +T+  +I GL    +  +A  L   M +    P+++T+ ++++G
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  +      LL+KM+  K+  D  I + ++D L K      +L  F   E +G
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/584 (35%), Positives = 333/584 (57%), Gaps = 50/584 (8%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
           FSS    +R++  R G ++ +  ++A  +F  M++  P P  V  FN LL+++AK K +D
Sbjct: 46  FSSGSGDYREIL-RNG-LHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFD 102

Query: 85  T------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-------------- 124
                  ++    +   LYTYNILINCFC+  ++SL     G++++              
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 125 ---------------------SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
                                  + P+  TF +LI GL   ++  EA AL  ++   GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN++TY  ++NGLC+ G T +ALNL  +M     E  VV       ++TIID LCK   V
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV------IFNTIIDSLCKYRHV 276

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A  LF +M+ + I P+VVTY+SLI  LC    W++A +L  +M+++ + P++VTFN +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D   K  K  EA +L D M++R + P+  TYN+L++GFC+  ++++A+++F  M S  C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V+YN LI G+CK+K VE+   L+REM  +G+    VTY TL  GLF     ++A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F +M  DGV  D  TY+  +DGLC NG + +A+E+F  ++  + +LDI  Y  +I+G+C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K+G++   W+LFCSL    + PNVVTYN MI GLC+   + +A  L   M+E+   P+  
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           T++ LI   +R  + +   EL+ +M+  + + DAS + +V ++L
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 230/451 (50%), Gaps = 6/451 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +++S   P+   FN L+  +    +     +L  K++       + TYN LIN  CR
Sbjct: 73  FGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCR 132

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +AL L  +M     E      P+ VT S++++G C    +  A AL  QM +   
Sbjct: 133 RSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +T+ +LIHGL   N  +EA  L   M+ +G QP++VT+ V+++ LCK    D A  
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ M    +  +   +NT++D  C    ++ A  LF  ME+ G + + V+Y+ LI+  C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 +A  L  +M+ K I P +VT+N L     +  +   A KL+D+M +  +  D  
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + ++G C +  + +A ++F  +    C  D+  YN LI G CKS R++   ELF  +
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            H  LV + VTY  +IQGL +DG  D A+ +F  M  +   PD++T+ +L+ G     + 
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            K  E+   M++ ++  D  I + +++ + K
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 234/467 (50%), Gaps = 12/467 (2%)

Query: 115 GFIAFGRILRSCFTPNAATFNSLIK-GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
           G   +GR     F+  +  +  +++ GLH + ++ +A  LF  +      P+++ +N L+
Sbjct: 38  GMCYWGR----AFSSGSGDYREILRNGLH-DMKLDDAIGLFGGMVKSRPLPSIVEFNKLL 92

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           + + +     + ++L E+M       G+       TY+ +I+  C+   +  A AL  +M
Sbjct: 93  SAIAKMKKFDVVISLGEKMQRLEIVHGLY------TYNILINCFCRRSQISLALALLGKM 146

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
                 P +VT +SL++G CH    ++A  L  +M++ G +P  +TF  ++  L  + K 
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA  L+D MVQRG +PN  TY  +++G C  G  + A  L   ME+   + D V +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+  CK + V++AL+L++EM +KGI+P VVTY++L   L    +   A +L  +M    +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  T+   ID   K G  +EA +L+  +     + DI  YN L++G C   RL  A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           +F  +      P+VVTYN +I+G C   +++   +LF +M       D +T+  LI G  
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
              +     ++  +M    V PD    SI++D L  N    K+L  F
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 182/370 (49%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  LF  M      P +V +N L+  +     ++    L  +M    +   + T+N+
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  LL  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D +++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +    + AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M+   + AD   + T ID LCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A +L   +    + PN+VT+N +I     +G+  +A  L+ DM + +  PD+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T++ L++GF   +   K  ++   M  K   PD    + ++    K++        F  
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 583 QERQGEVGES 592
              +G VG++
Sbjct: 426 MSHRGLVGDT 435



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 1/236 (0%)

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL NG   + ++++A+ L+  MV     P++V +N L   + ++ + +  + L ++MQR 
Sbjct: 56  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            +     TY   I+  C+   I  A+ L   +  L  E  I   + L++G C   R+  A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   +      P+ +T+  +I GL    +  +A  L   M +    P+++T+ ++++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  +      LL+KM+  K+  D  I + ++D L K      +L  F   E +G
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/496 (39%), Positives = 300/496 (60%), Gaps = 12/496 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           PP+  FN ++ SL K KHY T      ++   G+ P+L+T NILINCFC +G+++  F  
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G+IL+  + PN  T N+L+KGL  +  + ++     K+ A G + + ++Y TL+NGLC+
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  AL L   + + +       +PN V Y+TIIDGLCK+  V++A  L+ +M    I
Sbjct: 128 IGETRSALKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+V+TY++LI+G C A    EA  L  EM+ + + P+V T+ ++MD LCK  K+ EA  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL +M + GV+PN  +YNTLMDG+CL+G++  A+++F +M   G   +  SYNI+I+  C
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLC 301

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+K V+EA++L RE++ K + P  VTY++L  G  ++ ++  AL L  EM   G  AD  
Sbjct: 302 KSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVV 361

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT+ +D LCKN  + +A  LF  ++    + +   Y  LIDGLCK GR K A +LF  L
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHL 421

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  NV TYN+MI GLC +G +D+A  +   MEEN   PD +TF+++I      ++ 
Sbjct: 422 LVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQN 481

Query: 539 SKVNELLHKMKEKKVM 554
            K  +LLH+M  K ++
Sbjct: 482 DKAEKLLHEMIAKDLL 497



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 217/407 (53%), Gaps = 6/407 (1%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           TP    FN ++  L        A +LF +++  G EP++ T N LIN  C  G    +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +  ++      + +  +PNT+T +T++ GLC +G V K+     ++  +    D V+Y +
Sbjct: 67  VLGKI------LKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L++GLC   +   A +L   + D+  +P+VV +N I+D LCK++ ++EA  L   M  RG
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + PN  TY+TL+ GFCL G++  A  L   M       +  +Y IL++  CK  +V+EA 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +L   M  +G+KP VV+YNTL  G   I +V++A ++F  M + GV  +  +Y   ID L
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK+  + EA+ L R +       +   Y+ LIDG CK GR+  A +L   + H     +V
Sbjct: 301 CKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADV 360

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           VTY  ++  LC +  +DKA  LF+ M+E    P+  T+  LI G  +
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 201/383 (52%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + ++ I+  L K      A +LF QM+ + I PD+ T N LI+  CH      +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP+ +T N +M  LC   ++ ++    D +V +G + +  +Y TL++G C 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+   A +L   +E    + + V YN +I+G CK+K V EA  LY EM ++GI P V+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+TL  G     Q+  A  L +EM    +  +  TYT  +D LCK G + EA  L   + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + ++ +YN L+DG C  G ++ A ++F ++    + PNV +YNIMI  LC   ++D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A +L  ++      P+ +T+  LI GF ++   +   +LL +M  +    D    + ++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
           D L KN+   K+   F+  + +G
Sbjct: 368 DALCKNQNLDKATALFMKMKERG 390


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 207/520 (39%), Positives = 310/520 (59%), Gaps = 13/520 (2%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
           NFSS L +           ++   ++A   F+ ML M  +PP +  FN +L S AK KHY
Sbjct: 17  NFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKMKHY 75

Query: 84  DT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            T      RL   G+ P+L T NILINCFC +G+++ GF    +IL+  + P+  T N+L
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           IKGL  + ++ +A     KL A G + N ++Y TLING+C+ G T  A+ L +++     
Sbjct: 136 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID---- 191

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
             G + KPN V YSTIID LCK   V +A  LF +M  + I+ DVVTY++LI+G C    
Sbjct: 192 --GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EA  L  EM+ + + P+V T+N+++D LCK  K+ EA  +L +M++  V+P+  TY+T
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           LMDG+ L+ ++ +A+ +F +M  MG   D  +Y ILING+CKNK V+EAL+L++EM  K 
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           + P +VTY++L  GL +  ++ +   L DEM   G  A+  TY++ IDGLCKNG++  A+
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAI 429

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            LF  ++      +   +  L+DGLCK GRLK A E+F  L       NV TYN+MI G 
Sbjct: 430 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGH 489

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           C  G +++A  +   ME+N   PD +TF+++I    + +E
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 231/447 (51%), Gaps = 6/447 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+L    TP    FN ++           A +L  +L+  G +P++IT N LIN  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G      ++  ++            P+TVT +T+I GLC +G V KA     ++  +  
Sbjct: 107 MGQITFGFSVLAKILKRG------YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             + V+Y +LI+G+C   D   A +L  ++  +  +P+VV ++ I+D LCK + + EA  
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +G+  +  TY+TL+ GFC+ GK+  A  L   M       +  +YNIL++  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V+EA S+   M+   +KP V+TY+TL  G F +++V+ A  +F+ M   GV  D  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I+G CKN  + EA+ LF+ +        I  Y+ LIDGLCKSGR+ + W+L   +
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  NV+TY+ +I GLC +G +D+A  LF  M++    P+  TF +L+ G  +    
Sbjct: 401 HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 460

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD 565
               E+   +  K    +    ++++D
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMID 487



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 153/270 (56%), Gaps = 14/270 (5%)

Query: 81   KHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
            KHY T      RL   G+ P+L+T NILINCFC +G+++  F    +IL+  + P+  TF
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 135  NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
             +LI GL  + ++ +A     KL A G + N ++Y TLING+C+ G T  A+ L  ++  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID- 1058

Query: 195  GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                 G + KP+ V Y+TIID LCK   V KA  LF +M  + I+ DVVTYN+LI+G C 
Sbjct: 1059 -----GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113

Query: 255  ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK--MDEASRLLDLMVQRGVRPNA 312
                 EA  L  +M+ + + P+V T+N+++D LCK  K  +DE+  +L  M   G + NA
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173

Query: 313  CTYNTLMDGFCLMGKINRAEELFGSMESMG 342
             T+  ++       + ++ E+L   M + G
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEMIARG 1203



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 179/348 (51%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A + F +M      P ++ +N ++        ++ A  L   +  +G+QP ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   ++     +L  +++RG  P+  T NTL+ G CL G++ +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + VSY  LING CK  +   A+ L +++  +  KP VV Y+T+   L +   V  A 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF EM   G++AD  TY+T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G++K A  +   +    + P+V+TY+ ++ G     ++ KA+ +F  M      PDV
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            T+ +LI+GF +     +   L  +M +K ++P     S ++D L K+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 161/322 (50%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           ++A   F  M+     P ++ FN I+D   K +    A  L   +  +G++P+  T N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ FC MG+I     +   +   G   D V+ N LI G C   +V++AL  + +++++G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +   V+Y TL  G+ +I     A+KL  ++       +   Y+T ID LCK   + EA  
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           LF  + +     D+  Y+ LI G C  G+LK A  L   +    + PNV TYNI++  LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G++ +A+ +   M +    PDVIT+  L+ G+  + E  K   + + M    V PD  
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 559 IVSIVVDLLVKNEISLKSLPSF 580
             +I+++   KN++  ++L  F
Sbjct: 341 TYTILINGFCKNKMVDEALNLF 362



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 33/278 (11%)

Query: 271  QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            +G+QP + T N++++  C   ++     +L  +++RG  P+  T+ TL++G CL G++N+
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 331  AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
            A      + + G + + VSY  LING CK  +   A+ L R++  +  KP VV YNT+  
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 391  GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
             L +   V  A  LF EM   G++AD  TY T I G C  G + EA+ L   + +     
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 451  DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            +++ YN L+D LCK G+                                   +D++  + 
Sbjct: 1135 NVRTYNILVDALCKEGK---------------------------------DLLDESLSML 1161

Query: 511  LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
              ME+N    + +TF+++I      +E  KV +LLH+M
Sbjct: 1162 SKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 8/266 (3%)

Query: 150  AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
            A +L  +L+  G +P++ T N LIN  C  G      ++  ++            P+T+T
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG------YHPDTIT 998

Query: 210  YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            ++T+I+GLC +G V+KA     ++  +    + V+Y +LI+G+C   D   A +L  ++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 270  DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             +  +P VV +N I+D LCK++ + +A  L   M  +G+  +  TYNTL+ GFC++GK+ 
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 330  RAEELFGSMESMGCKHDDVSYNILINGYCKNKE--VEEALSLYREMVSKGIKPTVVTYNT 387
             A  L   M       +  +YNIL++  CK  +  ++E+LS+  +M   G K   VT+  
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 388  LFLGLFEIHQVEHALKLFDEMQRDGV 413
            +   LFE  + +   KL  EM   G+
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 124/239 (51%), Gaps = 2/239 (0%)

Query: 226  AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
            A +L  +++ + I PD+ T N LI+  CH         +  +++ +G  P  +TF  +++
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 286  ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             LC   ++++A    D ++ +G + N  +Y TL++G C +G    A +L   ++    K 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 346  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
            D V YN +I+  CK++ V +A  L+ EM  KGI   VVTYNTL  G   + +++ A+ L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 406  DEMQRDGVAADTRTYTTFIDGLCKNG--YIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            ++M    +  + RTY   +D LCK G   + E++ +   +    C+ +   +  +I  L
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 2/226 (0%)

Query: 204  KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            +P+  T + +I+  C  G +    ++  ++     +PD +T+ +LI+GLC     N+A  
Sbjct: 958  QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH 1017

Query: 264  LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
               +++ QG Q + V++  +++ +CK      A +LL  +  R  +P+   YNT++D  C
Sbjct: 1018 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077

Query: 324  LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                +++A  LF  M   G   D V+YN LI G+C   +++EA+ L  +MV K I P V 
Sbjct: 1078 KHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVR 1137

Query: 384  TYNTLFLGLFEIHQ--VEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            TYN L   L +  +  ++ +L +  +M+ +G  A+  T+   I  L
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 107/209 (51%)

Query: 361  KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            K    A+SL   +  KGI+P + T N L      + Q+     +  ++ + G   DT T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 421  TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            TT I+GLC  G + +A+     L     +L+  +Y  LI+G+CK G  + A +L   +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 481  GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             +  P+VV YN +I  LC    + KA  LF +M     + DV+T++ LI+GF  + +  +
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 541  VNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               LL+KM  K + P+    +I+VD L K
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCK 1148



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 15/231 (6%)

Query: 51   FCIFDYMLRMHPSPPPVSSFNILLASLA------KNKHYDTRLNATGLFPNLYTYNILIN 104
            F I   +L+    P  ++ F  L+  L       K  H+  +L A G   N  +Y  LIN
Sbjct: 981  FSILAKILKRGYHPDTIT-FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLIN 1039

Query: 105  CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
              CKIG          +I      P+   +N++I  L     + +A  LF ++   G   
Sbjct: 1040 GVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISA 1099

Query: 165  NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG--F 222
            +V+TYNTLI G C  G    A+ L  +M      +     PN  TY+ ++D LCKEG   
Sbjct: 1100 DVVTYNTLIYGFCIVGKLKEAIGLLNKM------VLKTINPNVRTYNILVDALCKEGKDL 1153

Query: 223  VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            +D++ ++  +M+D     + VT+  +I  L   ++ ++ ++L  EM+ +G+
Sbjct: 1154 LDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 71/152 (46%)

Query: 436  AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
            AV L   L +   + D+   N LI+  C  G++ F + +   +      P+ +T+  +I 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 496  GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            GLC  GQ++KA      +       + +++  LI+G  +I +     +LL K+  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 556  DASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            D  + + ++D L K+++  K+   F     +G
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKG 1096


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/534 (39%), Positives = 316/534 (59%), Gaps = 19/534 (3%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
           NFSS L +           ++   ++A   F+ ML M  +PP +  FN +L S AK KHY
Sbjct: 17  NFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQ-FNKILDSFAKIKHY 75

Query: 84  DT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            T      RL   G+ P+L T NILINCFC +G+++ GF    +IL+  + P+  TF +L
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTL 135

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           IKGL  + ++ +A     KL A G + + ++Y TLING+C+ G T  A+ L  ++     
Sbjct: 136 IKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID---- 191

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
             G + KPN   Y+TIID LCK   V +A  LF +M  + I+ DVVTY +LI+G C A+ 
Sbjct: 192 --GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASK 249

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EA  L  EM+ + + P+V T+N+++D LCK  K+ EA  +L +M++  V+P+  TY+T
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYST 309

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           LMDG+ L+ ++ +A+ +F +M  MG   D  SY ILING+CKNK V+EAL+L++EM  K 
Sbjct: 310 LMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           + P +VTY++L  GL +  ++ +   L DEM+  G+ A+  TY + IDGLCKNG++  A+
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAI 429

Query: 438 ELFRTLR---ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
            LF  ++   I  C      +  L+DGLCK GRLK A E F  L       +V  YN+MI
Sbjct: 430 ALFNKMKDQGIRPCSF---TFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMI 486

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            G C  G +++A  +   MEEN   P+ +TFD++I+   + +E  K  +LL +M
Sbjct: 487 NGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 157/285 (55%), Gaps = 6/285 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+YTYNIL++  CK G+V         +L++C  P+  T+++L+ G      + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHV 326

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +   G  P+V +Y  LING C+      ALNLF+EM   N        P  VTYS++
Sbjct: 327 FNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIVTYSSL 380

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGLCK G +     L  +M+D  I  +V+TYNSLI GLC     + A  LF +M DQG+
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P   TF +++D LCK  ++ +A      ++ +G   +   YN +++G C  G +  A  
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   ME  GC  + V+++I+IN   K  E ++A  L R+M+ +G+
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 179/348 (51%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A + F +M      P ++ +N ++        ++ A  L   +  +G+QP ++T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   ++     +L  +++RG +P+  T+ TL+ G CL G++N+A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D VSY  LING CK  +   A+ L R++  +  KP V  YNT+   L +   V  A 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF EM   G++AD  TYTT I G C    + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G++K A  +   +    + P+V+TY+ ++ G     ++ KA+ +F  M      PDV
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            ++ +LI+GF +     +   L  +M +K ++P     S ++D L K+
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 159/322 (49%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           ++A   F  M+     P ++ FN I+D   K +    A  L   +  +G++P+  T N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ FC MG+I     +   +   G +   +++  LI G C   +V +AL  + +++++GI
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           K   V+Y TL  G+ +I     A+KL  ++       +   Y T ID LCK   + EA  
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           LF  +       D+  Y  LI G C + +LK A  L   +    + PNV TYNI++  LC
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G++ +A+++   M +    PDVIT+  L+ G+  + E  K   + + M    V PD  
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 559 IVSIVVDLLVKNEISLKSLPSF 580
             +I+++   KN++  ++L  F
Sbjct: 341 SYTILINGFCKNKMVDEALNLF 362


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/517 (38%), Positives = 303/517 (58%), Gaps = 16/517 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY-------DTRLNATGLFPNLYTYN 100
           ++A   F++ML   P P  +  FN LL+++ + + Y         ++   GL PN  T N
Sbjct: 72  DDALASFNHMLHRKPLPC-IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILINCFC +  V LGF    ++++    P   TF +LI GL       +A  LF  + A 
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           GC+P+V TY T+INGLC+ G T  A  L ++M    GE+G  C+P+ VTYST+ID LCK+
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKM----GEVG--CQPDVVTYSTLIDSLCKD 244

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             V++A  +F  MK + I+P VV+Y SLI GLC  + W EA  +  EM    + P +VTF
Sbjct: 245 RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTF 304

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           ++++D  CK   + EA  +L  M + GV PN  TYN+LM G+ L  ++  A +LF  M +
Sbjct: 305 SLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GCK D  SY+ILINGYC  K ++EA  L+ EM+ +G+ P  V+Y TL     ++ ++  
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A +LF +M  +G   D  TY+  ++G CK GY+ +A  LFR ++    + ++  Y  LID
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484

Query: 461 GLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            +CKSG L  A +LF  L  HG L P+V  Y  +I GLC +G +D+A + F  MEE+   
Sbjct: 485 SMCKSGNLNHARKLFSELFVHG-LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCP 543

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           P+  +++++I GF++  + S+  +L+ +M++K  + D
Sbjct: 544 PNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 235/471 (49%), Gaps = 7/471 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGL 176
           +F  +L     P    FN L+  +    +  +A  +L  +++  G  PN  T N LIN  
Sbjct: 77  SFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCF 136

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C   H  +  ++  ++      I +  +P  +T++T+I+GLCK G   +A  LF  M   
Sbjct: 137 CLMQHVDLGFSVLAKV------IKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PDV TY ++I+GLC   +   A  L  +M + G QP VVT++ ++D LCK+R ++EA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +   M  +G+ P   +Y +L+ G C   +   A  +   M S+    D V++++LI+ 
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +CK   V EA  + + M   G++P V+TYN+L  G     +V  A KLFD M   G   D
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             +Y+  I+G C    I EA +LF  +       +  +Y  LI   C+ G+L+ A ELF 
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +     +P++ TY+++++G C  G + KA  LF  M+     P+++ + +LI    +  
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSG 490

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +   +L  ++    + PD  I + +++ L K  +  ++L +F   E  G
Sbjct: 491 NLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG 541



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 175/361 (48%), Gaps = 12/361 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L+ SL K++  +  L+      A G+ P + +Y  LI   C   R       
Sbjct: 229 PDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAM 288

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  TF+ LI     E  ++EA  +   +   G EPNVITYN+L++G   
Sbjct: 289 LNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL 348

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               + A  LF+ M      I   CKP+  +YS +I+G C    +D+AK LF +M  + +
Sbjct: 349 QMEVVEARKLFDVM------ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ V+Y +LIH  C      EA+ LF +M   G  P + T++V+++  CK   + +A R
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR 462

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M    ++PN   Y  L+D  C  G +N A +LF  +   G + D   Y  +ING C
Sbjct: 463 LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC 522

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++EAL  +R+M   G  P   +YN +  G  +      A++L  EM+  G  AD  
Sbjct: 523 KEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEG 582

Query: 419 T 419
           T
Sbjct: 583 T 583


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/539 (38%), Positives = 312/539 (57%), Gaps = 21/539 (3%)

Query: 18  ISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL 77
           I  FR++F   L  F     +  D +V   N     F  MLRM P+P  V  FN +L S+
Sbjct: 15  IPPFRASFCHYLHPF---IPKSNDFDV---NNDVSSFHRMLRMRPTPSIVE-FNKILGSI 67

Query: 78  AK--NKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
            K  N HY T      +L   G+ P + T+NIL+NC+C +G ++  F  F +IL+  + P
Sbjct: 68  VKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHP 127

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
              TFN+LI G+    ++ EA      + A G   + ++Y TLINGLC+ G T  AL + 
Sbjct: 128 TTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQML 187

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           +++       G +   + V Y+ II+ LCK+  V  A  L+ +M  + I+PDVVT+NSLI
Sbjct: 188 KKIE------GKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLI 241

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C      EA  LF EM+ + + P V TF++++D LCK+  +  A  +L +M+++GV 
Sbjct: 242 LGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVI 301

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  TY++LMDG+CL+ ++N+A+ +F +M  +G      SYNI+ING  K K V+EALSL
Sbjct: 302 PDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSL 361

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           ++EM  KGI P  VTYN+L  GL ++ ++ +A +L DEM  +G+ AD  TY + ID LCK
Sbjct: 362 FKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCK 421

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           N +I +A+ L + ++    +  +  YN LIDGLCK GRLK A ++F  L       N  T
Sbjct: 422 NHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWT 481

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           YNIMI GLC +G  ++A  L   ME N   PD +T++ +I    R +E  K  +LL +M
Sbjct: 482 YNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 208/437 (47%), Gaps = 48/437 (10%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILI 103
           AF IF  +L++   P  ++ FN L+  +  N       H+   + A G   +  +Y  LI
Sbjct: 113 AFSIFAKILKLGYHPTTIT-FNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLI 171

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N  CKIG          +I       +   +N +I  L  +  + +A  L++++      
Sbjct: 172 NGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+T+N+LI G C  G    A  LF EM   N        P+  T+S ++D LCK+G +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN------INPDVYTFSILVDALCKDGNI 285

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +AK +   M  + + PDVVTY+SL+ G C  N+ N+AK +F  M   GV P   ++N++
Sbjct: 286 TRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIM 345

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG- 342
           ++ L K + +DEA  L   M  +G+ P+  TYN+L+DG C +G+I+ A +L   M + G 
Sbjct: 346 INGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGI 405

Query: 343 --------------CKHDDV--------------------SYNILINGYCKNKEVEEALS 368
                         CK+  +                    +YNILI+G CK   ++ A  
Sbjct: 406 PADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQD 465

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++++++ KG      TYN +  GL +      A  L  +M+ +G+  D  TY T I  L 
Sbjct: 466 VFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALF 525

Query: 429 KNGYIIEAVELFRTLRI 445
           +     +A +L R + I
Sbjct: 526 RKDENEKAEKLLREMII 542



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 183/343 (53%), Gaps = 25/343 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
           ++A+ ++  M+    SP  V +FN L+              A GLF         P++YT
Sbjct: 216 SDAYQLYSEMITKRISPD-VVTFNSLILGFCVVGQLK---EAFGLFHEMVLKNINPDVYT 271

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           ++IL++  CK G ++        +++    P+  T++SL+ G    + + +A  +F+ + 
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIID 215
             G  P+  +YN +INGL +      AL+LF+EM          CK   P+TVTY+++ID
Sbjct: 332 RLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC---------CKGIAPDTVTYNSLID 382

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLCK G +  A  L  +M +  I  D++TYNSLI  LC  +  ++A  L  ++ DQG+QP
Sbjct: 383 GLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQP 442

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           S+ T+N+++D LCK  ++  A  +   ++ +G   NA TYN +++G C  G  N AE L 
Sbjct: 443 SMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLL 502

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
             ME+ G   D V+Y  +I    +  E E+A  L REM+ +G+
Sbjct: 503 SKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 179/369 (48%), Gaps = 37/369 (10%)

Query: 240 PDVVTYNSLIHGLCHAND--WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           P +V +N ++  +  AN+  +  A  L  ++  +G+ P++VTFN++++  C   +M  A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS-------- 349
            +   +++ G  P   T+NTL++G CL GK+  A      + ++G   D VS        
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 350 ---------------------------YNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
                                      YNI+IN  CK+K V +A  LY EM++K I P V
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VT+N+L LG   + Q++ A  LF EM    +  D  T++  +D LCK+G I  A  +   
Sbjct: 235 VTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       D+  Y+ L+DG C    +  A  +F ++    + P+  +YNIMI GL     
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D+A  LF +M     APD +T++ LI G  ++   S   +L+ +M    +  D    + 
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 563 VVDLLVKNE 571
           ++D+L KN 
Sbjct: 415 LIDVLCKNH 423



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 168/326 (51%), Gaps = 2/326 (0%)

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK--NRKMDEASRLLDLMVQRGVRPNACT 314
           D N     F  M+     PS+V FN I+  + K  N     A  L   +  +G+ P   T
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           +N L++ +C +G++  A  +F  +  +G     +++N LING C N +++EAL  +  ++
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           + G     V+Y TL  GL +I +   AL++  +++   V  D   Y   I+ LCK+  + 
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           +A +L+  +   +   D+  +N LI G C  G+LK A+ LF  +    + P+V T++I++
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             LC DG + +A+++   M +    PDV+T+  L+ G+  +NE +K   +   M    V 
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSF 580
           P A   +I+++ L K ++  ++L  F
Sbjct: 337 PHAHSYNIMINGLGKIKMVDEALSLF 362



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 2/266 (0%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCK--NKEVEEALSLYREMVSKGIKPTVVTY 385
           +N     F  M  M      V +N ++    K  N     A+SL  ++  KGI PT+VT+
Sbjct: 38  VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTF 97

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L      + ++  A  +F ++ + G    T T+ T I+G+C NG + EA+     +  
Sbjct: 98  NILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA 157

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           L   LD  +Y  LI+GLCK G  + A ++   +   ++  +VV YNI+I  LC D  +  
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  L+ +M     +PDV+TF+ LI GF  + +  +   L H+M  K + PD    SI+VD
Sbjct: 218 AYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277

Query: 566 LLVKNEISLKSLPSFLVQERQGEVGE 591
            L K+    ++     V  +QG + +
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPD 303


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 334/607 (55%), Gaps = 64/607 (10%)

Query: 17  PISAFRSNFSSLL------VHFRDLTT---------REGDINVITPNEAFCIFDYMLRMH 61
           P++   SNF+ +L      +H+  +T          R G ++ I  N+A  +F+ M++  
Sbjct: 7   PLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVD-IKVNDAIDLFESMIQSR 65

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLG 115
           P P P+  FN L +++A+ K YD  L         G+  ++YT  I+INC+C+  ++   
Sbjct: 66  PLPTPID-FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F   GR  +  + P+  TF++L+ G   E R+ EA AL  ++      P+++T +TLING
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184

Query: 176 LC-----------------------------------RTGHTMIALNLFEEMANGNGEIG 200
           LC                                   ++G++ +AL+LF +M   N    
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN---- 240

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
              K + V YS +ID LCK+G  D A +LF +M+ + I  DVVTY+SLI GLC+   W++
Sbjct: 241 --IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
             ++  EM+ + + P VVTF+ ++D   K  K+ EA  L + M+ RG+ P+  TYN+L+D
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GFC    ++ A ++F  M S GC+ D V+Y+ILIN YCK K V++ + L+RE+ SKG+ P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             +TYNTL LG  +  ++  A +LF EM   GV     TY   +DGLC NG + +A+E+F
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             ++  +  L I  YN +I G+C + ++  AW LFCSL    + P+VVTYN+MI GLC  
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G + +A  LF  M+E+   PD  T+++LI   +  +      EL+ +MK      D+S +
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598

Query: 561 SIVVDLL 567
            +V+D+L
Sbjct: 599 KMVIDML 605



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 8/457 (1%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           S  T    ++   ++    + ++ +A  LF  +      P  I +N L + + RT    +
Sbjct: 29  SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 88

Query: 185 ALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            L   + M  NG        + +  T + +I+  C++  +  A ++  +       PD +
Sbjct: 89  VLGFCKGMELNG-------IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI 141

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T+++L++G C     +EA  L   M++   +P +VT + +++ LC   ++ EA  L+D M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V+ G +P+  TY  +++  C  G    A +LF  ME    K   V Y+I+I+  CK+   
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++ALSL+ EM  KGIK  VVTY++L  GL    + +   K+  EM    +  D  T++  
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ID   K G ++EA EL+  +       D   YN LIDG CK   L  A ++F  +     
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P++VTY+I+I   C   ++D    LF ++      P+ IT++ L+ GF +  + +   E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           L  +M  + V P      I++D L  N    K+L  F
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 50/315 (15%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----- 79
           FS+L+    D+  +EG +      EA  +++ M+    +P  ++ +N L+    K     
Sbjct: 318 FSALI----DVFVKEGKLL-----EAKELYNEMITRGIAPDTIT-YNSLIDGFCKENCLH 367

Query: 80  --NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
             N+ +D  + + G  P++ TY+ILIN +CK  RV  G   F  I      PN  T+N+L
Sbjct: 368 EANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           + G     ++  A  LF ++ + G  P+V+TY  L++GLC  G    AL +FE+M     
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486

Query: 198 EIGV---------VC--------------------KPNTVTYSTIIDGLCKEGFVDKAKA 228
            +G+         +C                    KP+ VTY+ +I GLCK+G + +A  
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           LF +MK++   PD  TYN LI      +    +  L  EM   G      T  +++D L 
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML- 605

Query: 289 KNRKMDEASRLLDLM 303
            +R++D++   LD++
Sbjct: 606 SDRRLDKS--FLDML 618



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%)

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +V +A+ L+  M+     PT + +N L   +    Q +  L     M+ +G+  D  T T
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             I+  C+   ++ A  +      L  E D   ++ L++G C  GR+  A  L   +   
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++VT + +I GLC  G++ +A  L   M E    PD +T+  +++   +    +  
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +L  KM+E+ +       SIV+D L K+     +L  F   E +G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 334/607 (55%), Gaps = 64/607 (10%)

Query: 17  PISAFRSNFSSLL------VHFRDLTT---------REGDINVITPNEAFCIFDYMLRMH 61
           P++   SNF+ +L      +H+  +T          R G ++ I  N+A  +F+ M++  
Sbjct: 36  PLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVD-IKVNDAIDLFESMIQSR 94

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLG 115
           P P P+  FN L +++A+ K YD  L         G+  ++YT  I+INC+C+  ++   
Sbjct: 95  PLPTPID-FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 153

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F   GR  +  + P+  TF++L+ G   E R+ EA AL  ++      P+++T +TLING
Sbjct: 154 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 213

Query: 176 LC-----------------------------------RTGHTMIALNLFEEMANGNGEIG 200
           LC                                   ++G++ +AL+LF +M   N    
Sbjct: 214 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN---- 269

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
              K + V YS +ID LCK+G  D A +LF +M+ + I  DVVTY+SLI GLC+   W++
Sbjct: 270 --IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 327

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
             ++  EM+ + + P VVTF+ ++D   K  K+ EA  L + M+ RG+ P+  TYN+L+D
Sbjct: 328 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 387

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GFC    ++ A ++F  M S GC+ D V+Y+ILIN YCK K V++ + L+RE+ SKG+ P
Sbjct: 388 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 447

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             +TYNTL LG  +  ++  A +LF EM   GV     TY   +DGLC NG + +A+E+F
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 507

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             ++  +  L I  YN +I G+C + ++  AW LFCSL    + P+VVTYN+MI GLC  
Sbjct: 508 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 567

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G + +A  LF  M+E+   PD  T+++LI   +  +      EL+ +MK      D+S +
Sbjct: 568 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 627

Query: 561 SIVVDLL 567
            +V+D+L
Sbjct: 628 KMVIDML 634



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 8/457 (1%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           S  T    ++   ++    + ++ +A  LF  +      P  I +N L + + RT    +
Sbjct: 58  SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 117

Query: 185 ALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            L   + M  NG        + +  T + +I+  C++  +  A ++  +       PD +
Sbjct: 118 VLGFCKGMELNG-------IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI 170

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T+++L++G C     +EA  L   M++   +P +VT + +++ LC   ++ EA  L+D M
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V+ G +P+  TY  +++  C  G    A +LF  ME    K   V Y+I+I+  CK+   
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++ALSL+ EM  KGIK  VVTY++L  GL    + +   K+  EM    +  D  T++  
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ID   K G ++EA EL+  +       D   YN LIDG CK   L  A ++F  +     
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P++VTY+I+I   C   ++D    LF ++      P+ IT++ L+ GF +  + +   E
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           L  +M  + V P      I++D L  N    K+L  F
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 507



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 50/315 (15%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----- 79
           FS+L+    D+  +EG +      EA  +++ M+    +P  ++ +N L+    K     
Sbjct: 347 FSALI----DVFVKEGKLL-----EAKELYNEMITRGIAPDTIT-YNSLIDGFCKENCLH 396

Query: 80  --NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
             N+ +D  + + G  P++ TY+ILIN +CK  RV  G   F  I      PN  T+N+L
Sbjct: 397 EANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           + G     ++  A  LF ++ + G  P+V+TY  L++GLC  G    AL +FE+M     
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515

Query: 198 EIGV---------VC--------------------KPNTVTYSTIIDGLCKEGFVDKAKA 228
            +G+         +C                    KP+ VTY+ +I GLCK+G + +A  
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           LF +MK++   PD  TYN LI      +    +  L  EM   G      T  +++D L 
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML- 634

Query: 289 KNRKMDEASRLLDLM 303
            +R++D++   LD++
Sbjct: 635 SDRRLDKS--FLDML 647



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%)

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +V +A+ L+  M+     PT + +N L   +    Q +  L     M+ +G+  D  T T
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             I+  C+   ++ A  +      L  E D   ++ L++G C  GR+  A  L   +   
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++VT + +I GLC  G++ +A  L   M E    PD +T+  +++   +    +  
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +L  KM+E+ +       SIV+D L K+     +L  F   E +G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/564 (36%), Positives = 317/564 (56%), Gaps = 48/564 (8%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           N I+ ++A   F  M RM+P P  V  F   L S+AK K Y T      +++  G+   +
Sbjct: 70  NTISVDDALASFYRMARMNPRPSIVE-FGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTV 128

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           Y+ NILINC C++  V      +G++ +    P+  TF +LI G+  E +I  A  L+ +
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +   G EP+VI+YNTLINGLC +G+T +A+++F++M   NG     CKPN VTY+TIID 
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ-NG-----CKPNVVTYNTIIDS 242

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK+  V+ A     +M    I PD +TYNS++HGLC     NEA RLF  M   G +P 
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VVT+N+I+D L K+R +++A+  L  MV +G+ P+  TY T++ G C +G++N A  LF 
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            ME  GCK D V+YN +I+  CK++ V +A+    EMV +GI P  VTY+T+  G   + 
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR------------ 444
           Q++ A +LF EM    V  +T T++  +DGLC+ G + EA  +F T+             
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYN 482

Query: 445 ------ILKCEL-----------------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
                  L+C++                 D+ +YN LI+G C S R+  A  L   +   
Sbjct: 483 ALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK 542

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            L PN VTYN +++GLC  G++  A++LF  M  +   P ++T+ +L++G  +     + 
Sbjct: 543 KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEA 602

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
            +L   MKEKK+ PD  + +I+++
Sbjct: 603 LKLFKSMKEKKLEPDIILYTILIE 626



 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 161/452 (35%), Positives = 269/452 (59%), Gaps = 12/452 (2%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++ SL K++       + + +   G+ P+  TYN +++  C +G+++     
Sbjct: 231 PNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRL 290

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+ ++   P+  T+N +I  L+ +  + +AA   +++   G  P+V+TY T+++GLC 
Sbjct: 291 FKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCY 350

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ LF++M          CKP+ V Y+TIID LCK+  V+ A     +M D  I
Sbjct: 351 LGQLNEAIRLFKKMEQKG------CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VTY++++HG C+    +EA +LF EM+ + V P+ +TF++++D LC+   + EA  
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M ++GV PN  TYN LM+G+CL  K+N A ++F  M   GC  D  SYNILINGYC
Sbjct: 465 VFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYC 524

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            ++ +++A +L  +M  K + P  VTYNT+  GL  + ++  A +LF +M   G+     
Sbjct: 525 NSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLM 584

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY+  ++GLCK+G++ EA++LF++++  K E DI  Y  LI+G+   G+L+ A  LF  L
Sbjct: 585 TYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKL 644

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               + P   TYN+MI+GL  +G  D+A +LF
Sbjct: 645 SADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 234/406 (57%), Gaps = 13/406 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
           NEA  +F  M   +   P V ++NI++ SL K++       + + +   G+ P++ TY  
Sbjct: 285 NEATRLFKRM-EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++  C +G+++     F ++ +    P+   +N++I  L  +  + +A    +++   G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN +TY+T+++G C  G    A  LF+EM      +G    PNT+T+S ++DGLC+EG
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEM------VGRNVMPNTLTFSILVDGLCQEG 457

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A+ +F  M ++ + P++ TYN+L++G C     NEA+++F  M+ +G  P + ++N
Sbjct: 458 MVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYN 517

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++++  C +R+MD+A  LL  M  + + PN  TYNT+M G C +G++  A+ELF  M S 
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSS 577

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G     ++Y+IL+NG CK+  ++EAL L++ M  K ++P ++ Y  L  G+F   ++E A
Sbjct: 578 GMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVA 637

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
             LF ++  DG+    RTY   I GL K G   EA ELFR  +++K
Sbjct: 638 KGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMK 683



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A   F  M  M  +   V +   +    K K+    + L  +M   G+  TV + N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L   L  ++ V+ A+ ++ +M + G+  D  T+TT I+G+C  G I  AVEL+  +    
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E D+ +YN LI+GLC SG    A  +F  +      PNVVTYN +I  LC D  ++ A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           D   +M      PD IT++ ++HG   + + ++   L  +M++    PD    +I++D L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 568 VKNEI 572
            K+ +
Sbjct: 314 YKDRL 318


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/552 (36%), Positives = 316/552 (57%), Gaps = 48/552 (8%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIG 110
           M++  P  P +  FN LL+++AK K +D       ++   G+  NLYTYNILINCFC+  
Sbjct: 1   MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59

Query: 111 RVSLGFIAFGRILR----------------SC-------------------FTPNAATFN 135
           ++SL     G++++                 C                   + P+  TF 
Sbjct: 60  QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           +LI GL   ++  EA AL  ++   GC+PN++TY  ++NGLC+ G   +A NL  +M   
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
             E  VV       ++TIID LCK   VD A  LF +M+ + I P+VVTY+SLI  LC  
Sbjct: 180 KIEADVV------IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
             W++A +L  +M+++ + P++VTFN ++D   K  K  EA +L D M++R + P+  TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N+L++GFC+  ++++A+++F  M S  C  D  +YN LI G+CK+K VE+   L+REM  
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G+    VTY TL  GLF     ++A K+F +M  DGV  D  TY+  +DGLC NG + +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+E+F  ++  + +LDI  Y  +I+G+CK+G++   W+LFCSL    + PNVVTYN MI 
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           GLC+   + +A  L   M+E+   PD  T++ LI   +R  + +   EL+ +M+  + + 
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 533

Query: 556 DASIVSIVVDLL 567
           DAS + +V ++L
Sbjct: 534 DASTIGLVANML 545



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 226/441 (51%), Gaps = 6/441 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+   FN L+  +    +     +L  K++  G   N+ TYN LIN  CR     +AL L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E      P+ VT S++++G C    +  A AL  QM +    PD +T+ +L
Sbjct: 68  LGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           IHGL   N  +EA  L   M+ +G QP++VT+ V+++ LCK   +D A  LL+ M    +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
             +   +NT++D  C    ++ A  LF  ME+ G + + V+Y+ LI+  C      +A  
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L  +M+ K I P +VT+N L     +  +   A KL D+M +  +  D  TY + I+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
            +  + +A ++F  +    C  D+  YN LI G CKS R++   ELF  + H  LV + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY  +IQGL +DG  D A+ +F  M  +   PD++T+ +L+ G     +  K  E+   M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
           ++ ++  D  I + +++ + K
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCK 442



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 176/353 (49%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P +  +N L+  +     ++    L  +M   G+  ++ T+N++++  C+  ++  A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG + D +++  LI+G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           + +  EA++L   MV +G +P +VTY  +  GL +   ++ A  L ++M+   + AD   
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           + T ID LCK  ++ +A+ LF+ +       ++  Y+ LI  LC  GR   A +L   + 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + PN+VT+N +I     +G+  +A  L  DM + +  PD+ T++ LI+GF   +   
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           K  ++   M  K   PD    + ++    K++        F     +G VG++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 136/267 (50%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV+    P+   +N L+     M K +    L   M+ +G  H+  +YNILIN +C+  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  AL+L  +M+  G +P++VT ++L  G     ++  A+ L D+M   G   DT T+TT
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I GL  +    EAV L   +    C+ ++  Y  +++GLCK G +  A+ L   +    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           +  +VV +N +I  LC    +D A +LF +ME     P+V+T+  LI         S  +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +LL  M EKK+ P+    + ++D  VK
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVK 267



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 99/215 (46%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           MV     P++  +N L   + ++ + +  + L ++MQR G++ +  TY   I+  C+   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           I  A+ L   +  L  E  I   + L++G C   R+  A  L   +      P+ +T+  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I GL    +  +A  L   M +    P+++T+ ++++G  +  +      LL+KM+  K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +  D  I + ++D L K      +L  F   E +G
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/576 (35%), Positives = 314/576 (54%), Gaps = 49/576 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           R G ++ I  ++A  +F  MLR  P  P V  FN L   LA+ K YD       ++   G
Sbjct: 63  RSGLVD-IKKDDAVALFQSMLRSRP-LPTVIDFNRLFGLLARTKQYDLVLALCKQMELKG 120

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +  +LYT NI+INCFC+  ++   F A G+I +  + PN  TFN+L+ GL  E R+ EA 
Sbjct: 121 IAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAV 180

Query: 152 AL-----------------------------------FTKLKAFGCEPNVITYNTLINGL 176
            L                                     ++ A GC+PN  TY  ++N +
Sbjct: 181 ELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRM 240

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C++G+T  AL+L  +M +         KP+ VTY+ IID LCK+G +D A + F +M+ +
Sbjct: 241 CKSGNTASALDLLRKMEHRK------IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK 294

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I  +V TYNSLI   C    W++  +L  +M+ + + P+VVTF+ ++D L K  K+ EA
Sbjct: 295 GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA 354

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L + M+ RG+ PN  TYN+L+ G C   +++ A ++   M S GC  D  +YNILING
Sbjct: 355 KDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILING 414

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +CK K+V++ + L+R+M  +G+    VTY+TL  G  +  ++  A K+F EM   GV   
Sbjct: 415 FCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY   +DGLC NG + EA+ +   +   K ELDI  YN +I G+C + ++  AW LFC
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFC 534

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           SLP   +  ++ +YNIM+ GLC    + +A  LF  M+E+   PD  T++ LI   +R N
Sbjct: 535 SLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGN 594

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           + +   +L+ +MK      DAS V IV+D+L   E+
Sbjct: 595 DITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGEL 630



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 109/224 (48%)

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A++L++ M+     PTV+ +N LF  L    Q +  L L  +M+  G+A D  T    
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+  C+   +  A      +  L  E +   +N L++GLC  GR+  A EL   +     
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP+++T N ++ GLC   ++ +A DL   M  N   P+  T+  +++   +    +   +
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LL KM+ +K+ P     +I++D L K+     +L  F   E +G
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/541 (37%), Positives = 303/541 (56%), Gaps = 57/541 (10%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFN----------- 135
           +   GLFP+ +T+NILINC C + RV+ G  A   I+R  + P+  T++           
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 136 ---------------------------------SLIKGLHAESRIMEAAALFTKLKAFGC 162
                                            +LIKGL  E RI EA  LF  ++  GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ ITY TL+ GLC+TG+  IAL L +EM N  G  G+ CKP  ++YS IIDGLCK+  
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            D+A+ LF +MK + + PDV++Y SLIHG CH+  W +AK LF EM+D G+QP V T  V
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK  K+ EA+ LL++MV RG   +  TY+TL+ G C+  +I+ A +LF SM+ +G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVS-------KGIKPTVVTYNTLFLGLFEI 395
           C+ D ++Y  L+ G C+  ++  AL L++EM++       K I+P V T + L   L + 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +V  A +L + M + G   D  TY+T I GLC    I EA  LF +++ L C  D   Y
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 456 NCLIDGLCKSGRLKFAWELFCSL-----PHGVLV-PNVVTYNIMIQGLCNDGQMDKARDL 509
             L+ GLC++G +  A +L   +      +G+   P +++Y+I+I GLC D + D+AR+L
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M+     PDVI++  LIHGF    +  K   L ++M +  + PD +  S+++D+L K
Sbjct: 481 FEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 540

Query: 570 N 570
            
Sbjct: 541 K 541



 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 196/554 (35%), Positives = 297/554 (53%), Gaps = 84/554 (15%)

Query: 94  PNLYTYNILINCFCKIGRV-SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           P++ T ++LI+  CK G+V     +    I R C   +  T+++LIKGL  E RI EA  
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL-DIVTYSTLIKGLCMEHRISEATW 403

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           LF  ++  GC P+ ITY TL+ GLC+TG+  IAL L +EM N  G  G+ CKP  ++YS 
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           IIDGLCK+   D+A+ LF +MK + I PDV++Y +LIHG C +  W +AK LF EM+D G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           +QP V T +V++D LCK  K+ EA++LL++++QRG   +  T  TL+ G C+  +I++A 
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 333 ELFGSMESMG-----------------------------------------CKHDDVSYN 351
           +LF  M+ +G                                         CK + +SY+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           I+I+G CK    +EA  L++EM + G+ P V++Y +L  G     + + A  LF+EM   
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 703

Query: 412 GVAAD-----------------------------------TRTYTTFIDGLCKNGYIIEA 436
           GV  D                                   T TYTT + GLC N  I EA
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-----PHGV-LVPNVVTY 490
            +LF  ++ L C  D+  Y  L+ GLC++G +K A EL   +      +G    P+V++Y
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           +I+I GLC  G+ D+AR+LF +M+     P+VI++  LIHGF R  +      L ++M +
Sbjct: 824 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 883

Query: 551 KKVMPDASIVSIVV 564
           + V  +A   S+++
Sbjct: 884 QGVQLNAVTYSVMI 897



 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 161/436 (36%), Positives = 254/436 (58%), Gaps = 13/436 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  +F+ M +     P V S+  L+     +  ++        +   G+ P++ T ++
Sbjct: 475 DEARELFEEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 533

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  CK G+V         +++     +  T  +L+KGL  + RI +A  LF K++  G
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PNV+T  TL+ GLC++G+  IAL L + M +     G+ CKPN ++YS IIDGLCK G
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             D+A+ LF +MK   + PDV++Y SLIHG C +  W +AK LF EM+D GVQP V TF+
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++D LCK  K+ EA+ LL++M+QRG  PN  TY TL+ G C+  +I+ A +LF  M+ +
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 773

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVS------KGIKPTVVTYNTLFLGLFEI 395
           GC  D V+Y  L+ G C+   ++ AL L+++M+S         KP V++Y+ +  GL + 
Sbjct: 774 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 833

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            + + A +LF EM+  GV  +  +YT+ I G C++G + +A  LF  +     +L+   Y
Sbjct: 834 GREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTY 893

Query: 456 NCLIDGLCKSGRLKFA 471
           + +I G CK G++  A
Sbjct: 894 SVMIHGFCKEGQIDKA 909



 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 187/582 (32%), Positives = 300/582 (51%), Gaps = 64/582 (10%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+  L+     +  ++        +   G+ P++ T  +LI+ FCK G+V    I 
Sbjct: 198 PDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKV----IE 253

Query: 119 FGRIL-----RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
              +L     R C   +  T+++LIKGL  + RI EA  LF  +K  GC P+ I Y TL+
Sbjct: 254 ANELLEVMVHRGCIL-DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVC-KPNT------------------------- 207
            GLC+TG   IAL+L +EM N   + G+ C +P+                          
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEV 372

Query: 208 ----------VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                     VTYST+I GLC E  + +A  LF+ M+     PD +TY +L+ GLC   +
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432

Query: 258 WNEAKRLFIEMM-DQG-----VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
            N A +L  EM+ D G      +P+++++++I+D LCK+R+ DEA  L + M  +G+ P+
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             +Y TL+ GFCL GK  +A+ LF  M  +G + D  + ++LI+  CK  +V EA  L  
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            ++ +G    VVT  TL  GL   H++  A +LF +MQ+ G   +  T  T + GLC++G
Sbjct: 553 VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 612

Query: 432 YIIEAVELFRTLRI------LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            I  A+EL + +        + C+ +  +Y+ +IDGLCK GR   A ELF  +    ++P
Sbjct: 613 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 672

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +V++Y  +I G C  G+   A+ LF +M +    PDV TF +LI    +  +  + NELL
Sbjct: 673 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 732

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             M ++  +P+    + +V  L  N+   ++   F+  ++ G
Sbjct: 733 EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 774



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 158/470 (33%), Positives = 242/470 (51%), Gaps = 26/470 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S++I++  L K++  D        + A G+ P++ +Y  LI+ FC  G+       
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L     P+  T + LI  L  + +++EA  L   +   GC  +V+T  TL+ GLC 
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-- 236
                 A  LF +M        + C PN VT +T++ GLC+ G +  A  L   M  +  
Sbjct: 576 KHRISKATQLFLKMQK------LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 629

Query: 237 ----NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
               N  P+ ++Y+ +I GLC     +EA+ LF EM   GV P V+++  ++   C++ K
Sbjct: 630 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 689

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             +A  L + MV  GV+P+  T++ L+D  C  GK+  A EL   M   GC  + V+Y  
Sbjct: 690 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 749

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD- 411
           L+ G C N  + EA  L+ +M   G  P VVTY TL  GL +   ++ AL+L  +M  D 
Sbjct: 750 LVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDT 809

Query: 412 -----GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
                    D  +Y+  IDGLCK+G   EA ELF+ ++ L    ++ +Y  LI G C+SG
Sbjct: 810 GQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSG 869

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
           +L+ A  LF  +    +  N VTY++MI G C +GQ+DKA  LF  ME N
Sbjct: 870 KLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 266/526 (50%), Gaps = 33/526 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLF-----PN 95
           +EA  +F  M ++   P  ++ +  L+  L +  +       +   LN TG +     P 
Sbjct: 399 SEATWLFMSMQKLGCRPDAIT-YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L +Y+I+I+  CK  R       F  +      P+  ++ +LI G     +  +A  LF 
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++   G +P+V T + LI+ LC+ G  + A  L E +          C  + VT +T++ 
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG------CILDVVTCTTLVK 571

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---- 271
           GLC +  + KA  LFL+M+     P+VVT  +L+ GLC + +   A  L   M+      
Sbjct: 572 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631

Query: 272 --GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
               +P+ +++++I+D LCK  + DEA  L   M   GV P+  +Y +L+ GFC  GK  
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A+ LF  M  +G + D  ++++LI+  CK  +V EA  L   M+ +G  P  VTY TL 
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    ++  A +LF +MQ+ G   D  TY T + GLC+ G I  A+EL + +     +
Sbjct: 752 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 450 L------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+ +Y+ +IDGLCK GR   A ELF  +    ++PNV++Y  +I G C  G++
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 871

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           + A+ LF +M +     + +T+ ++IHGF +  +  K   L  KM+
Sbjct: 872 EDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 33/309 (10%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ P   TFN++++ LC  ++++E    +  +++RG  P+  TY+               
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI-------------- 50

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
                       + D  + ++LI+  CK  +V EA  L   M+ +G    +VTY+TL  G
Sbjct: 51  ------------RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL------RI 445
           L   H++  A  LF  MQ+ G   D  TY T + GLC+ G I  A++L + +        
Sbjct: 99  LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 158

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +KC+  + +Y+ +IDGLCK  R   A ELF  +    ++P+V++Y  +I G C+ G+ +K
Sbjct: 159 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEK 218

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A+ LF +M +    PDV T  +LI  F +  +  + NELL  M  +  + D    S ++ 
Sbjct: 219 AKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIK 278

Query: 566 -LLVKNEIS 573
            L +K+ IS
Sbjct: 279 GLCMKHRIS 287


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/598 (35%), Positives = 326/598 (54%), Gaps = 47/598 (7%)

Query: 5   SCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           SC  R FS  S              V +R+   R G ++ I  ++A  +F  M R  P P
Sbjct: 22  SCYGRVFSSVSDGKGK---------VSYRE-RLRSGIVD-IKEDDAVDLFQEMTRSRPRP 70

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
             +  F+ L + +A+ K YD       ++   G+  NLYT +I+INC C+  ++SL F A
Sbjct: 71  RLID-FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G+I++  + P+  TF++LI GL  E R+ EA  L  ++   G +P +IT N L+NGLC 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 179 TGHTMIALNLFEEMANGNGE---------IGVVCKP--------------------NTVT 209
            G    A+ L + M     +         + V+CK                     + V 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS IIDGLCK+G +D A  LF +M+ +    D++ Y +LI G C+A  W++  +L  +M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            + + P VV F+ ++D   K  K+ EA  L   M+QRG+ P+  TY +L+DGFC   +++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A  +   M S GC  +  ++NILINGYCK   +++ L L+R+M  +G+    VTYNTL 
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  E+ ++E A +LF EM    V  D  +Y   +DGLC NG   +A+E+F  +   K E
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           LDI  YN +I G+C + ++  AW+LFCSLP   + P+V TYNIMI GLC  G + +A  L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           F  MEE+  +P+  T+++LI   +   + +K  +L+ ++K      DAS V +VVD+L
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 225/471 (47%), Gaps = 7/471 (1%)

Query: 111 RVSLGFIAFGRILRSCFTPNA-ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           R +L    +GR+  S        ++   ++    + +  +A  LF ++      P +I +
Sbjct: 16  RTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDF 75

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           + L + + RT    + L+L ++M     E+  +   N  T S +I+  C+   +  A + 
Sbjct: 76  SRLFSVVARTKQYDLVLDLCKQM-----ELKGIAH-NLYTLSIMINCCCRCRKLSLAFSA 129

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             ++      PD VT+++LI+GLC     +EA  L   M++ G +P+++T N +++ LC 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           N K+ +A  L+D MV+ G +PN  TY  ++   C  G+   A EL   ME    K D V 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y+I+I+G CK+  ++ A +L+ EM  KG K  ++ Y TL  G     + +   KL  +M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           +  +  D   ++  ID   K G + EA EL + +       D   Y  LIDG CK  +L 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  +   +      PN+ T+NI+I G C    +D   +LF  M       D +T++ LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            GF  + +     EL  +M  ++V PD     I++D L  N    K+L  F
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 199/405 (49%), Gaps = 9/405 (2%)

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +F  +++G G++           S I+D   KE   D A  LF +M      P ++ ++ 
Sbjct: 27  VFSSVSDGKGKVSY----RERLRSGIVD--IKE---DDAVDLFQEMTRSRPRPRLIDFSR 77

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L   +     ++    L  +M  +G+  ++ T +++++  C+ RK+  A   +  +++ G
Sbjct: 78  LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+  T++TL++G CL G+++ A EL   M  MG K   ++ N L+NG C N +V +A+
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   MV  G +P  VTY  +   + +  Q   A++L  +M+   +  D   Y+  IDGL
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK+G +  A  LF  + I   + DI  Y  LI G C +GR     +L   +    + P+V
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V ++ +I     +G++ +A +L  +M +   +PD +T+  LI GF + N+  K N +L  
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           M  K   P+    +I+++   K  +    L  F     +G V ++
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 43/301 (14%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLA-----SLAK 79
           FS+L+    D   +EG +      EA  +   M++   SP  V+  +++        L K
Sbjct: 320 FSALI----DCFVKEGKLR-----EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 80  NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
             H    + + G  PN+ T+NILIN +CK   +  G   F ++       +  T+N+LI+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           G     ++  A  LF ++ +    P++++Y  L++GLC  G    AL +FE++     E+
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490

Query: 200 GV---------VC--------------------KPNTVTYSTIIDGLCKEGFVDKAKALF 230
            +         +C                    KP+  TY+ +I GLCK+G + +A  LF
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M+++  +P+  TYN LI       D  ++ +L  E+   G      T  +++D L   
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610

Query: 291 R 291
           R
Sbjct: 611 R 611


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/490 (40%), Positives = 295/490 (60%), Gaps = 12/490 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           PP+  FN +L S AK KHY T      RL   G+ P+L+T NILINCFC +G+++ GF  
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +IL+  + P+  T N+LIKGL  + ++ +A     KL A G + N ++Y TLING+C+
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  A+ L  ++       G + KPN   YSTIID LCK   V +A  LF +M  + I
Sbjct: 425 IGDTRGAIKLLRKID------GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 478

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + DVVTY++LI+G C      EA  L  EM+ + + P V T+ +++D L K  K+ EA  
Sbjct: 479 SADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKS 538

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L +M++  V+P+  TYNTLM+G+ L+ ++ +A+ +F +M  MG   D  +Y ILING+C
Sbjct: 539 VLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 598

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+K V+EAL+L++EM  K + P  VTY++L  GL +  ++ +   L DEM+  G  AD  
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + IDGLCKNG++ +A+ LF  ++      +   +  L+DGLCK GRLK A E+F  L
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  +V  YN+MI G C  G +++A  +   MEEN   P+ +TFD++I+   + +E 
Sbjct: 719 LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEN 778

Query: 539 SKVNELLHKM 548
            K  +LL +M
Sbjct: 779 DKAEKLLRQM 788



 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 161/483 (33%), Positives = 254/483 (52%), Gaps = 40/483 (8%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           +IL+  + P+  T N+LIKGL  + ++ EA     KL A G + N ++Y TLING+CR G
Sbjct: 53  KILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIG 112

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            T  A+    ++       G + KPN   Y+TIID LCK   V +A  LF +M  + I+ 
Sbjct: 113 DTRAAIKFLRKID------GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +VVTY++LI+G C      EA  L   M+ + + P+V T+N+++D LCK  K+ EA  +L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
            +M++  V+ N  TY+TLMDG+ L+ ++ +A+ +F +M  MG   D  SYNI+ING+CK 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 361 KEVEEALSLYREMV----------------------------------SKGIKPTVVTYN 386
           K V++AL+L++EM+                                   KGI+P + T N
Sbjct: 287 KRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L      + Q+     +  ++ + G    T T  T I GLC  G + +A+     L   
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +L+  +Y  LI+G+CK G  + A +L   +   +  PNV  Y+ +I  LC    + +A
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF +M     + DV+T+  LI+GF  + +  +   LL++M  K + PD    +I+VD 
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526

Query: 567 LVK 569
           L K
Sbjct: 527 LGK 529



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 253/492 (51%), Gaps = 7/492 (1%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           L+  + K +H    ++  G+ P++++YNI+IN FCKI RV      F  ++ S F P   
Sbjct: 250 LVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-II 308

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            FN ++           A +L  +L+  G +P++ T N LIN  C  G      ++  ++
Sbjct: 309 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKI 368

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       P+TVT +T+I GLC +G V KA     ++  +    + V+Y +LI+G+
Sbjct: 369 LKRG------YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 422

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C   D   A +L  ++  +  +P+V  ++ I+D LCK + + EA  L   M  +G+  + 
Sbjct: 423 CKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 482

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY+TL+ GFC++GK+  A  L   M       D  +Y IL++   K  +V+EA S+   
Sbjct: 483 VTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAV 542

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+   +KP V TYNTL  G   +++V+ A  +F+ M   GV  D  TYT  I+G CK+  
Sbjct: 543 MLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKM 602

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + EA+ LF+ +       D   Y+ L+DGLCKSGR+ + W+L   +       +V+TYN 
Sbjct: 603 VDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNS 662

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I GLC +G +DKA  LF  M++    P+  TF +L+ G  +        E+   +  K 
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722

Query: 553 VMPDASIVSIVV 564
              D  I ++++
Sbjct: 723 YHLDVYIYNVMI 734



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 250/495 (50%), Gaps = 9/495 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+ TYNIL++  CK G+V         +L++C   N  T+++L+ G      + +A  +
Sbjct: 201 PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHV 260

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-PNTVTYST 212
           F  +   G  P+V +YN +ING C+      ALNLF+EM        ++ + P  + ++ 
Sbjct: 261 FNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM--------ILSRFPPIIQFNK 312

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+D   K      A +L  +++ + I PD+ T N LI+  CH         +  +++ +G
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 372

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             PS VT N ++  LC   ++ +A    D ++ +G + N  +Y TL++G C +G    A 
Sbjct: 373 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   ++    K +   Y+ +I+  CK + V EA  L+ EM  KGI   VVTY+TL  G 
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
             + +++ A+ L +EM    +  D RTYT  +D L K G + EA  +   +     + D+
Sbjct: 493 CIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDV 552

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN L++G      +K A  +F ++    + P+V TY I+I G C    +D+A +LF +
Sbjct: 553 FTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKE 612

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M +    PD +T+  L+ G  +    S V +L+ +M+++    D    + ++D L KN  
Sbjct: 613 MHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH 672

Query: 573 SLKSLPSFLVQERQG 587
             K++  F   + QG
Sbjct: 673 LDKAIALFNKMKDQG 687



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/557 (27%), Positives = 261/557 (46%), Gaps = 46/557 (8%)

Query: 64  PPPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   + N L+  L       +  H+  +L A G   N  +Y  LIN  C+IG       
Sbjct: 60  PPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIK 119

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              +I      PN   +N++I  L     + EA  LF+++   G   NV+TY+TLI G C
Sbjct: 120 FLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFC 179

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
             G    AL L   M      +     PN  TY+ ++D LCKEG V +AK++   M    
Sbjct: 180 IVGKLKEALGLLNVM------VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKAC 233

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           +  +V+TY++L+ G     +  +A+ +F  M   GV P V ++N++++  CK +++D+A 
Sbjct: 234 VKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKAL 293

Query: 298 RLLDLMVQ----------------------------------RGVRPNACTYNTLMDGFC 323
            L   M+                                   +G++P+  T N L++ FC
Sbjct: 294 NLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            MG+I     +   +   G     V+ N LI G C   +V++AL  + +++++G +   V
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 413

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +Y TL  G+ +I     A+KL  ++       +   Y+T ID LCK   + EA  LF  +
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            +     D+  Y+ LI G C  G+LK A  L   +    + P+V TY I++  L  +G++
Sbjct: 474 TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKV 533

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A+ +   M +    PDV T++ L++G++ + E  K   + + M    V PD    +I+
Sbjct: 534 KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 593

Query: 564 VDLLVKNEISLKSLPSF 580
           ++   K+++  ++L  F
Sbjct: 594 INGFCKSKMVDEALNLF 610



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 255/514 (49%), Gaps = 13/514 (2%)

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           + P V  +N ++ +L K +         + +   G+  N+ TY+ LI  FC +G++    
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                ++     PN  T+N L+  L  E ++ EA ++   +     + NVITY+TL++G 
Sbjct: 189 GLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGY 248

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
                   A ++F  M+     +GV   P+  +Y+ +I+G CK   VDKA  LF +M   
Sbjct: 249 FLVYEVKKAQHVFNAMS----LMGVT--PDVHSYNIMINGFCKIKRVDKALNLFKEMILS 302

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              P ++ +N ++        ++ A  L   +  +G+QP + T N++++  C   ++   
Sbjct: 303 RF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFG 361

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +L  +++RG  P+  T NTL+ G CL G++ +A      + + G + + VSY  LING
Sbjct: 362 FSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 421

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK  +   A+ L R++  +  KP V  Y+T+   L +   V  A  LF EM   G++AD
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY+T I G C  G + EA+ L   + +     D++ Y  L+D L K G++K A  +  
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    + P+V TYN ++ G     ++ KA+ +F  M      PDV T+ +LI+GF +  
Sbjct: 542 VMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSK 601

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              +   L  +M +K ++PD    S +VD L K+
Sbjct: 602 MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 178/329 (54%), Gaps = 6/329 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           + +   G+  ++ TY+ LI  FC +G++         ++     P+  T+  L+  L  E
Sbjct: 471 SEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKE 530

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            ++ EA ++   +     +P+V TYNTL+NG         A ++F  M+     +GV   
Sbjct: 531 GKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS----LMGVT-- 584

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+  TY+ +I+G CK   VD+A  LF +M  +N+ PD VTY+SL+ GLC +   +    L
Sbjct: 585 PDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDL 644

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             EM D+G    V+T+N ++D LCKN  +D+A  L + M  +G+RPN  T+  L+DG C 
Sbjct: 645 IDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCK 704

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G++  A+E+F  + + G   D   YN++I G+CK   +EEAL++  +M   G  P  VT
Sbjct: 705 GGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVT 764

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ++ +   LF+  + + A KL  +M   G+
Sbjct: 765 FDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 291 RKMDEASRL--LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           + +D+A  L  L  +++RG  P+  T NTL+ G CL G++  A      + + G + + V
Sbjct: 40  QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV 99

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           SY  LING C+  +   A+   R++  +  KP V  YNT+   L +   V  A  LF EM
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G++A+  TY+T I G C  G + EA+ L   + +     ++  YN L+D LCK G++
Sbjct: 160 TVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           K A  +   +    +  NV+TY+ ++ G     ++ KA+ +F  M      PDV +++++
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIM 279

Query: 529 IHGFIRINEPSKVNELLHKM 548
           I+GF +I    K   L  +M
Sbjct: 280 INGFCKIKRVDKALNLFKEM 299



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 84/169 (49%)

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           +L +  ++ + G   DT T  T I GLC  G + EA+     L     +L+  +Y  LI+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G+C+ G  + A +    +   +  PNV  YN +I  LC    + +A  LF +M     + 
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +V+T+  LI+GF  + +  +   LL+ M  K + P+    +I+VD L K
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCK 215


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/465 (43%), Positives = 278/465 (59%), Gaps = 62/465 (13%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++  GL P+L+T NIL NC C + RVS                         +GL A + 
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVS-------------------------EGLAAMTG 35

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I+    +          P+++TYNTLI GLCR                            
Sbjct: 36  ILRRGYI----------PDIVTYNTLIKGLCRVHRI------------------------ 61

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           +V    IIDGLCK G  D+AK +F +MK + + P+V++Y+SL+HG C A    E+KRLF 
Sbjct: 62  SVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFN 121

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+DQGVQP++V FNV++D LCK  K+ EA +LL++ +QRG+  +  TYN+L+DGFC +G
Sbjct: 122 EMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIG 181

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A +LF SM S GC+H+++SY ILINGYCK  +VEEA++LY EM   G +P V TY+
Sbjct: 182 DLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYS 241

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  GL +  +V  A KLF  M+  G++ D+  Y  F+DGLCKNG + EA+ELF  L+  
Sbjct: 242 TLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSY 301

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +LD ++Y+ LIDGLCK+G+++ AWE F  L    L PNVVT NIMI G C   Q+DKA
Sbjct: 302 NFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKA 361

Query: 507 RDLF---LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             LF     MEEN   PD+IT++ L+ GF   N+  +V  LLHKM
Sbjct: 362 NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 176/346 (50%), Gaps = 15/346 (4%)

Query: 72  ILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
           I++  L K  H D        + A G+ PN+ +Y+ L++ FC  G++      F  ++  
Sbjct: 67  IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ 126

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
              PN   FN LI  L  E +++EA  L       G   +++TYN+LI+G C+ G    A
Sbjct: 127 GVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             LF  M +        C+ N ++Y+ +I+G CK   V++A  L+ +M      P+V TY
Sbjct: 187 RKLFLSMPSKG------CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           ++L+ GL       +A +LF  M   G+      + + +D LCKN  + EA  L + +  
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
              + +  +Y+ L+DG C  GK+  A E F  +   G + + V+ NI+I+G+C+ ++V++
Sbjct: 301 YNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDK 360

Query: 366 ALSLYREMVS---KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           A  L+ +M      G  P ++TYNTL  G  E +++E  + L  +M
Sbjct: 361 ANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 174/347 (50%), Gaps = 16/347 (4%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGL 92
           +G   V   +EA  IF+ M +     P V S++ L+        L ++K     +   G+
Sbjct: 70  DGLCKVGHEDEAKEIFEEM-KAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGV 128

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PNL  +N+LI+  CK G+V          ++     +  T+NSLI G      +  A  
Sbjct: 129 QPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARK 188

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           LF  + + GCE N I+Y  LING C+      A+NL+ EM     ++G   +PN  TYST
Sbjct: 189 LFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMP----QVGK--RPNVKTYST 242

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ GL + G V  A  LF  MK   I+ D   Y   + GLC      EA  LF E+    
Sbjct: 243 LLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYN 302

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +    +++ ++D LCK  K++ A      + Q G++PN  T N ++ GFC + ++++A 
Sbjct: 303 FKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKAN 362

Query: 333 ELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            LF  ME M   GC  D ++YN L+ G+C++ ++EE ++L  +M  +
Sbjct: 363 ILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/497 (38%), Positives = 294/497 (59%), Gaps = 12/497 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           PP+  F  +L SL K KHY T      ++ A G+ P+L T +ILINCFC +G+++  F  
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G+IL+  + PN    N+L+KGL  +  + ++     K+ A G + + ++Y  L+NGLC+
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  A+ L   + + +       +P+ V YSTIIDGLCK+  VD+A  L+ +M    I
Sbjct: 128 IGETRCAIKLLRTIEDRS------TRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDV+TY +LI G C A    EA  L  EM+ + + P++ T+N ++D LCK  K+ E+  
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL +M ++GV+P+   Y+ LMDG+CL+G++ +A+++F  M   G   D  SYNI+ING C
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLC 301

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K K V+EA++L REM+ K + P  VTY++L  GL ++ ++   L L  EM   G  A+  
Sbjct: 302 KGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + +DGLCKN  + +A+ LF  ++    + +   Y  LIDGLCK GRLK    LF  L
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHL 421

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  +V TY +MI GLC +G  D+A  +   ME+N   P+ +TF+++I   +  +E 
Sbjct: 422 LVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDEN 481

Query: 539 SKVNELLHKMKEKKVMP 555
            K  +LLH+M  K ++P
Sbjct: 482 DKAEKLLHEMIAKGLLP 498



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 197/383 (51%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + +  I+  L K        +L  QM+ + I PD+VT + LI+  CH      +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP+ +  N +M  LC   ++ ++    D +V +G + +  +Y  L++G C 
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+   A +L  ++E    + D V Y+ +I+G CK+K V+EA  LY EM ++GI P V+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  G     Q+  A  L +EM    +  +  TY T ID LCK G + E+  L   + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + D+  Y+ L+DG C  G ++ A ++F  +    + P+V +YNI+I GLC   ++D
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A +L  +M      PD +T+  LI G  ++   + + +L  +M  +    +    + ++
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
           D L KN+   K++  F+  + +G
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERG 390


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  370 bits (949), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 206/547 (37%), Positives = 326/547 (59%), Gaps = 21/547 (3%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           N  F+F   P S+ + NF S   +    TT   + +V   ++A  +F+ +LR + +PP  
Sbjct: 35  NTHFNFI--PYSSSKINFIS---YSSTSTTFHSNNDV---DDAVSLFNRLLRRNTTPPAF 86

Query: 68  SSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
             FN +L SL K+KHY T      ++   G+ PNL   NILINCFC++G +   F  F +
Sbjct: 87  E-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAK 145

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL+  + P+  TF +L KGL  + +I +A     K+ A G   + I+Y TLI+GLC+ G 
Sbjct: 146 ILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGE 205

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           T  AL+L + + +GN     + +PN V Y+TIID +CK   V++A  LF +M  + I+PD
Sbjct: 206 TRAALDLLQRV-DGN-----LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPD 259

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VVTY++LI G C      +A  LF +M+ + ++P V TFN++++  CK+ KM E   + D
Sbjct: 260 VVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFD 319

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           +M+++G++PN  TYN+LMDG+CL+ ++N+A+ +F +M   G   D  SY+I+ING+CK K
Sbjct: 320 MMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIK 379

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           + +EA++L++EM  K I P VVTY++L  GL +  ++ +AL+L D+M   GV  +  TY 
Sbjct: 380 KFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYN 439

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +D LCK   + +A+ L    +    + DI  Y+ LI GLC+SG+L+ A ++F  L   
Sbjct: 440 SILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK 499

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
               +V  Y IMIQG C +G  ++A  L   ME+N   PD  T++++I    + +E    
Sbjct: 500 GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559

Query: 542 NELLHKM 548
            +LL +M
Sbjct: 560 EKLLREM 566



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 269/546 (49%), Gaps = 47/546 (8%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           H  P    SF  L     KN H++    ++    N  +Y+     F     V      F 
Sbjct: 21  HFVPKKFQSFQFL-----KNTHFNFIPYSSSKI-NFISYSSTSTTFHSNNDVDDAVSLFN 74

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R+LR   TP A  FN ++  L           L  K++  G +PN++  N LIN  C+ G
Sbjct: 75  RLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLG 134

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A ++F ++     ++G V  P+T+T++T+  GLC +G + +A     ++     + 
Sbjct: 135 LIPFAFSVFAKIL----KMGYV--PDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHF 188

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D ++Y +LIHGLC   +   A  L   +    VQP+VV +N I+D +CK + ++EA  L 
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             MV +G+ P+  TY+ L+ GFC++GK+  A +LF  M     K D  ++NIL+N +CK+
Sbjct: 249 SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++E  +++  M+ +GIKP  VTYN+L  G   + +V  A  +F+ M + GV  D ++Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I+G CK     EA+ LF+ +       D+  Y+ LIDGL KSGR+ +A +L   +  
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI---RINE 537
             + PN+ TYN ++  LC   Q+DKA  L    ++    PD+ T+ +LI G     ++ +
Sbjct: 429 RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLED 488

Query: 538 PSKVNE--------------------------------LLHKMKEKKVMPDASIVSIVVD 565
             KV E                                LL KM++   +PDA    I++ 
Sbjct: 489 ARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIIL 548

Query: 566 LLVKNE 571
            L K +
Sbjct: 549 SLFKKD 554



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 192/355 (54%), Gaps = 12/355 (3%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N ++ S+ K    N+ +D  + + + G+ P++ TY+ LI+ FC +G++      
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     P+  TFN L+     + ++ E   +F  +   G +PN +TYN+L++G C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA G    GV   P+  +YS +I+G CK    D+A  LF +M  +NI
Sbjct: 343 VKEVNKAKSIFNTMAQG----GV--NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVTY+SLI GL  +   + A +L  +M D+GV P++ T+N I+D LCK  ++D+A  
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIA 456

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL     +G +P+  TY+ L+ G C  GK+  A ++F  +   G   D  +Y I+I G+C
Sbjct: 457 LLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFC 516

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
                 EAL+L  +M   G  P   TY  + L LF+  + + A KL  EM   G+
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 11/268 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNI-----LLASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           E   +FD M++    P  V+  ++     L+  + K K     +   G+ P++ +Y+I+I
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N FCKI +       F  + R    P+  T++SLI GL    RI  A  L  ++   G  
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN+ TYN++++ LC+T     A+ L  +  +   +      P+  TYS +I GLC+ G +
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ------PDISTYSILIKGLCQSGKL 486

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           + A+ +F  +  +  N DV  Y  +I G C    +NEA  L  +M D G  P   T+ +I
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPN 311
           +  L K  + D A +LL  M+ RG+  N
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 129/277 (46%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  +Y++    F     ++ A  LF  +           +N ++    K+K     L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           ++M  +GIKP +V  N L     ++  +  A  +F ++ + G   DT T+TT   GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I +A      +  L    D  +Y  LI GLCK G  + A +L   +   ++ PNVV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +I  +C    +++A DLF +M     +PDV+T+  LI GF  + +     +L +KM  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           + + PD    +I+V+   K+    +    F +  +QG
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 193/528 (36%), Positives = 312/528 (59%), Gaps = 15/528 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD--------TRLNATGLFPNLYTY 99
           ++A  +F  M++  P  P +  FN LL+++AK K +D         ++   G  P++ T 
Sbjct: 24  DDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           + L+N +C   R+S       +++   + P+  TF +LI GL   ++  EA AL  ++  
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC+PN++TY  ++NGLC+ G   +A NL  +M     E  VV       ++TIID LCK
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV------IFNTIIDSLCK 196

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              VD A  LF +M+ + I P+VVTY+SLI  LC    W++A +L  +M+++ + P++VT
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           FN ++D   K  K  EA +L D M++R + P+  TYN+L++GFC+  ++++A+++F  M 
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           S  C  D  +YN LI G+CK+K VE+   L+REM  +G+    VTY TL  GLF     +
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           +A K+F +M  DGV  D  TY+  +DGLC NG + +A+E+F  ++  + +LDI  Y  +I
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G+CK+G++   W+LFCSL    + PNVVTYN MI GLC+   + +A  L   M+E+   
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           PD  T++ LI   +R  + +   EL+ +M+  + + DAS + +V ++L
Sbjct: 497 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 544



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 220/426 (51%), Gaps = 8/426 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH--TMIALNLFEEMANGNGEIGVVC 203
           ++ +A  LF  +      P++  +N L++ + +      +I+L L  +M     E     
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE----- 76

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+ VT S++++G C    +  A AL  QM +    PD +T+ +LIHGL   N  +EA  
Sbjct: 77  -PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L   M+ +G QP++VT+ V+++ LCK   +D A  LL+ M    +  +   +NT++D  C
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
               ++ A  LF  ME+ G + + V+Y+ LI+  C      +A  L  +M+ K I P +V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+N L     +  +   A KL D+M +  +  D  TY + I+G C +  + +A ++F  +
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C  D+  YN LI G CKS R++   ELF  + H  LV + VTY  +IQGL +DG  
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A+ +F  M  +   PD++T+ +L+ G     +  K  E+   M++ ++  D  I + +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 564 VDLLVK 569
           ++ + K
Sbjct: 436 IEGMCK 441



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 168/336 (50%), Gaps = 2/336 (0%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE--ASRLLDLMVQRGVRPNACTYN 316
           ++A  LF  M+     PS+  FN ++  + K +K D   +  LL  M++ G  P+  T +
Sbjct: 24  DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLS 83

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +L++G+C   +I+ A  L   M  MG + D +++  LI+G   + +  EA++L   MV +
Sbjct: 84  SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G +P +VTY  +  GL +   ++ A  L ++M+   + AD   + T ID LCK  ++ +A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           + LF+ +       ++  Y+ LI  LC  GR   A +L   +    + PN+VT+N +I  
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
              +G+  +A  L  DM + +  PD+ T++ LI+GF   +   K  ++   M  K   PD
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
               + ++    K++        F     +G VG++
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  369 bits (947), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 190/471 (40%), Positives = 280/471 (59%), Gaps = 6/471 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL PN  T NILINCFC++ RV LGF    + ++    P   TF +LI GL    +  +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF  + A GC+P+  TY T+INGLC+ G T +A  LF++M          C+ N VTY
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG------CQLNVVTY 118

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           ST+I  LCK   V++A  +F  MK ++I+P + TY SLI GLC+ + W EA  L  EM  
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             + P+VVTFNV++D  CK  K+  A  +L  M + GV P+  TYN+LM G+ +  ++  
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +LF  M + GCK D  SY+ILINGYCK K ++EA  L+ EM+ +G  P  V+YNTL  
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL ++ ++  A  LF  M  +G   +  TY   +DG CK GY+ +A  LFR ++    + 
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++  YN L++ +CKSG LK A ELF  L    L PNV  Y  +I GLC +G +D+A + F
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +ME++   PD  +++++I GF++  + S+   L+ +M+++  + DA   +
Sbjct: 419 RNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTA 469



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 218/427 (51%), Gaps = 6/427 (1%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  PN  T N LIN  C+     +    F  +A G   I +  +P  VT++T+I+GL K 
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLG---FSVLAKG---IKLGLQPTIVTFTTLINGLGKV 58

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G   +A  LF  M      PD  TY ++I+GLC   +   A  LF +M + G Q +VVT+
Sbjct: 59  GKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++  LCK R+++EA  +   M  + + P   TY +L+ G C   +   A  L   M S
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           +    + V++N+L++ +CK  +V  A  + + M   G++P VVTYN+L  G     +V  
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A KLFD M   G   D  +Y+  I+G CK   I EA +LF  +       +  +YN LI 
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLC+ GRL+ A +LF ++     +PN+ TY I++ G C  G + KA  LF  M+     P
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +++ +++L++   +        EL  ++    + P+  I + +++ L K  +  ++L +F
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418

Query: 581 LVQERQG 587
              E  G
Sbjct: 419 RNMEDDG 425



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 194/359 (54%), Gaps = 6/359 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N+ TY+ LI+  CK  RV+     F  +     +P   T+ SLI+GL   S
Sbjct: 105 KMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFS 164

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R  EA+AL  ++ +    PNV+T+N L++  C+ G  + A  + + M     E+GV  +P
Sbjct: 165 RWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMT----EMGV--EP 218

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY++++ G      V +A+ LF  M  +   PDV +Y+ LI+G C A   +EAK+LF
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM+ QG  P+ V++N ++  LC+  ++ EA  L   M   G  PN  TY  L+DGFC  
Sbjct: 279 NEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQ 338

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G + +A  LF +M+S   K + V YNIL+N  CK+  +++A  L+ E+   G++P V  Y
Sbjct: 339 GYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIY 398

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            T+  GL +   ++ AL+ F  M+ DG   D  +Y   I G  ++     AV L   +R
Sbjct: 399 TTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  368 bits (945), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 196/513 (38%), Positives = 300/513 (58%), Gaps = 13/513 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F+ ML M  + P +  F  +L SL K KH+ T      ++   G+ P+L T +I
Sbjct: 114 HDAVSQFNGMLLMR-NTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC +G+++  F   G+IL+  + PN     +L+KGL  +  + ++     K+ A G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            + N ++Y TL+NGLC+ G T  A+ L   + + +       +P+ V Y+TIIDGLCK+ 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS------TRPDVVMYNTIIDGLCKDK 286

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++A   + +M    I PDV+TY++LI G C A     A  L  EM  + + P V T+ 
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D LCK  K+ EA  LL +M + GV+PN  TY+TLMDG+CL+G+++ A+++F +M   
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
                  SYNI+ING CK K V+EA++L REM+ K + P  VTYN+L  GL +  ++  A
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSA 466

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L L  E+   G  AD  TYT+ +DGLCKN  + +A+ LF  ++    + +   Y  LIDG
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LCK  RLK A +LF  +       +V TYN+MI GLC +G +D+A  +   ME+N   PD
Sbjct: 527 LCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            +TF+++I      +E  K  +LLH+M  K ++
Sbjct: 587 AVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 253/514 (49%), Gaps = 20/514 (3%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ PNL T +ILINC   +G+++  F   G+IL+  + PN+ T  +L+KG   E+R  
Sbjct: 4   AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG---ETRC- 59

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN---------------LFEEMA 193
            A  L   ++     P +   ++L + +      +                   + + ++
Sbjct: 60  -AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVS 118

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
             NG + +   P+ + +  I+  L K      A +L  QM+ + I PD+VT + LI+  C
Sbjct: 119 QFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFC 178

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
           H      +  +  +++  G QP+ +    +M  LC   ++ ++    D +V +G + N  
Sbjct: 179 HLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y TL++G C +G+   A +L   +E    + D V YN +I+G CK+K V EA   Y EM
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM 298

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+GI P V+TY+TL  G     Q+  A  L +EM    +  D  TYT  ID LCK G +
Sbjct: 299 NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKL 358

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  L   +     + ++  Y+ L+DG C  G +  A ++F ++    + P+V +YNIM
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIM 418

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I GLC    +D+A +L  +M      P+ +T++ LI G  +    +   +L+ ++  +  
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQ 478

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             D    + ++D L KN+   K++  F+  + +G
Sbjct: 479 PADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 153/287 (53%), Gaps = 12/287 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+ +L K        N  G+       PN+ TY+ L++ +C +G V      
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++++   P+  ++N +I GL     + EA  L  ++      PN +TYN+LI+GLC+
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    AL+L +E+ +  G+       + +TY++++DGLCK   +DKA ALF++MK+  I
Sbjct: 460 SGRITSALDLMKELHH-RGQ-----PADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  TY +LI GLC       A++LF  ++ +G    V T+NV++  LCK   +DEA  
Sbjct: 514 QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALA 573

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
           +   M   G  P+A T+  ++       + ++AE+L   M + G  H
Sbjct: 574 MKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  368 bits (944), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 198/513 (38%), Positives = 299/513 (58%), Gaps = 15/513 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           PP+  FN +L SLAK K Y T      ++   G+  N  T NILINCFC +G+++  F  
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G+IL+  + P+  T N+L+KGL  +  + ++     K+ A G + + ++Y TL+NGLC+
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  A+ L   + + +       +PN V Y+TIIDGLCK+  V++A  L+ +M    I
Sbjct: 128 IGETRCAVKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +TY +LI+G C       A  L  EM+ + + P V  +N++++ LCK   + EA  
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL +M + G++P   TY+TLMDG+CL+G++  A+++F +M  MG   +  SYNI+ING C
Sbjct: 242 LLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC 301

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K K V+EA++L REM+ K + P  VTYN+L  GL +  ++  AL L +EM   G  AD  
Sbjct: 302 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 361

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT+ +D LCKN  + +A  LF  ++    +  +  Y  LIDGLCK GRLK A ELF  L
Sbjct: 362 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 421

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  +V TY +MI GLC +G  D+A  +   ME+N   P+ +TF+++I      +E 
Sbjct: 422 LVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEN 481

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            K  +LLH+M  K ++    +   V D+ V+NE
Sbjct: 482 DKAEKLLHEMIAKGLL---VLDFKVADVFVQNE 511



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 192/383 (50%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + ++ I+  L K      A +L  QM+ + I  + VT N LI+  CH      +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP  +T N +M  LC   ++ ++    D +V +G + +  +Y TL++G C 
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+   A +L   +E    + + V YN +I+G CK+K V EA  LY EM ++GI P  +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  G   + Q+  A  L DEM    +      Y   I+ LCK G + EA  L   + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               +  +  Y+ L+DG C  G ++ A ++F ++    + PNV +YNIMI GLC   ++D
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A +L  +M      PD +T++ LI G  +    +    L+++M  +    D    + ++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
           D L KN+   K+   F+  + +G
Sbjct: 368 DALCKNQNLDKATALFMKMKERG 390


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  368 bits (944), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 206/571 (36%), Positives = 318/571 (55%), Gaps = 49/571 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           R G ++ I  NEA  +F+ M++  P P  +  F+ L +++A+ K YD        ++  G
Sbjct: 42  RNGIVD-IKVNEAIDLFESMIQSRPLPSLID-FSKLFSAVARRKEYDLVLGFCKEMDLNG 99

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +  N+YT NI+INCFC+  ++   F   GR L+  F PN  TF++LI G   E R+ EA 
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLC---------------------------------- 177
           AL  ++      PNV+T NTLINGLC                                  
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219

Query: 178 -RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            ++G+T +AL+LF +M   +       K + V YS +ID LCK+G +D A +LF +M+ +
Sbjct: 220 CKSGNTALALDLFRKMEERS------IKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I  DVV Y+S+I GLC+   W++  ++  EM+ + + P+VVTF+ ++D   K  K+ EA
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L + MV RG+ P+  TY++L+DGFC   ++  A ++   M S GC+ + V+Y+ILIN 
Sbjct: 334 KELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           YCK K V+  + L+ E+ SKG+    VTYNTL  G  +  ++  A +LF EM   GV   
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY   +DGLC NG + +A+E+F  ++  +  L I  YN +I G+C + ++  AW LFC
Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFC 513

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           SL    + P+V+TYN+MI GLC  G + +A  LF  M+E+  AP   T+++LI   +  +
Sbjct: 514 SLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGS 573

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
                 EL+ +MK +    DAS + +VV +L
Sbjct: 574 GVISSVELIEEMKMRGFAADASTIKMVVVML 604



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 222/456 (48%), Gaps = 6/456 (1%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           SC +    ++   ++    + ++ EA  LF  +      P++I ++ L + + R     +
Sbjct: 28  SCISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDL 87

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
            L   +EM + NG      + N  T + +I+  C++  +  A ++  +       P+ +T
Sbjct: 88  VLGFCKEM-DLNG-----IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTIT 141

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +++LI+G C     +EA  L   M++   +P+VVT N +++ LC   ++ EA  L+D MV
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G   N  TY  +++  C  G    A +LF  ME    K   V Y+I+I+  CK+  ++
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +ALSL+ EM  KGIK  VV Y+++  GL    + +   K+  EM    +  +  T++  I
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D   K G ++EA EL+  +       D   Y+ LIDG CK  RL  A ++   +      
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PN+VTY+I+I   C   ++D    LF ++       D +T++ L+ GF +  + +   EL
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +M  + V P      I++D L  N    K+L  F
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF 477



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 29/232 (12%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G  PN+ TY+ILIN +CK  RV  G   F  I       +  T+N+L++G     ++ 
Sbjct: 377 SKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLN 436

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV------- 201
            A  LF ++ + G  P+V+TY  L++GLC  G    AL +FE+M      +G+       
Sbjct: 437 VAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIII 496

Query: 202 --VC--------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
             +C                    KP+ +TY+ +I GLCK+G + +A  LF +MK++   
Sbjct: 497 HGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCA 556

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           P   TYN LI      +    +  L  EM  +G      T  +++  L   R
Sbjct: 557 PSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGR 608


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  367 bits (943), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 198/509 (38%), Positives = 297/509 (58%), Gaps = 15/509 (2%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAK--NKHYDT------RLNATGLFPNLYTYNILINC 105
           F+++LR  P+   +  FN +L SL K  N HY T      RL   G+ P+++T+NILINC
Sbjct: 54  FNHLLRTKPTSSIIE-FNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINC 112

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           +C +  ++  F    +IL+  + P+  TFN+LIKGL    ++ EA      + A G   +
Sbjct: 113 YCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLD 172

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
             +Y TLINGLC+ G T  AL +  ++       G + K N V Y+TIID LCK   V  
Sbjct: 173 QFSYGTLINGLCKIGETRTALQMLRKID------GKLVKINVVMYNTIIDSLCKHKLVID 226

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  L+ QM  + I+PDVVT+++LI+G C      EA  LF EM+ + + P   TFN+++D
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LCK   +  A  +L +M++ GV PN  TY++LMDG+CL+ ++N+A+ +  ++  MG   
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +  SY  +ING+CK K V+EALSL+ +M  KGI P  VTYN+L  GL +  ++ +A +L 
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           DEM  +G  A+  TY   ID LCKN ++ +A+ L + ++    + D+  +N LI GLCK 
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           GRLK A ++F  L       N  TYNIM+ GLC +G  D+A  L   M++N   PD +T+
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTY 526

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           + LI      +E  K  +LL +M  + V+
Sbjct: 527 ETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 236/454 (51%), Gaps = 8/454 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGL--HAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           +F  +LR+  T +   FN ++  L     +    A +L  +L+  G  P++ T+N LIN 
Sbjct: 53  SFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINC 112

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C       A ++  ++     E      P+T+T++T+I GLC  G V +A      +  
Sbjct: 113 YCHMAEMNFAFSMMAKILKMGYE------PDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
              + D  +Y +LI+GLC   +   A ++  ++  + V+ +VV +N I+D LCK++ + +
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L   M+ + + P+  T++ L+ GFC++G++  A  LF  M       D  ++NIL++
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             CK   ++ A ++   M+ +G+ P VVTY++L  G   ++QV  A  + + + + G A 
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  +Y T I+G CK   + EA+ LF  ++      D   YN LIDGLCKSGR+ +AWEL 
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +       N+ TYN +I  LC +  +D+A  L   +++    PD+ TF++LI+G  ++
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                  ++   +  K    +A   +I+V+ L K
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 178/350 (50%), Gaps = 2/350 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND--WNEAKRLFIEMMDQGVQPSVVTF 280
           VD   + F  +        ++ +N ++  L  +N+  +  A  L   +   G+ P + TF
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N++++  C   +M+ A  ++  +++ G  P+  T+NTL+ G CL GK+  A      + +
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           +G   D  SY  LING CK  E   AL + R++  K +K  VV YNT+   L +   V  
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A +L+ +M    ++ D  T++  I G C  G + EA  LFR + +     D   +N L+D
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            LCK G LK A  +   +    ++PNVVTY+ ++ G C   Q++KA+ +   + +  AAP
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +  ++  +I+GF +I    +   L + M+ K + PD    + ++D L K+
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKS 396


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/488 (38%), Positives = 292/488 (59%), Gaps = 8/488 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGR--VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           ++ + + P++YT  ILINCFC          F   G + +    PN  TF++L+ GL ++
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           ++I++A  LF ++   G EP+VITY+T+INGLC+ G T +A+ L ++M          CK
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG------CK 114

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN V YSTIID LCK+  + +A     +M +  I+P+VVTY+S++HG C+    NEA  L
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +M+++ V P  VTFN+++D L K   + EA  + + M+++GV PN  TYN LMDG+C 
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             +++ A++LF  M   GC     SYNILI G+CK+  ++EA  L  EM  K + P  VT
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+TL  G  +  + + A KL +EM+  G+  D  TY+  +DGLCK G++ EA EL + ++
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
             K E +I  Y  LI G+C  G+L+ A ELF +L    + P+VVTY +MI GL   G  +
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A +LF DM  +   P+  T++++I GF+R  + S    L+ +M  +    D+S   ++ 
Sbjct: 415 EACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLS 474

Query: 565 DLLVKNEI 572
           DL  ++EI
Sbjct: 475 DLESRDEI 482



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/412 (33%), Positives = 224/412 (54%), Gaps = 8/412 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMI--ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           P+V T   LIN  C + H     A ++   M     ++G+  +PN VT+ST+++GL  + 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMF----KLGL--QPNHVTFSTLLNGLSSKA 61

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +  A  LF +M      PDV+TY+++I+GLC       A +L  +M ++G +P+VV ++
Sbjct: 62  KIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYS 121

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+D LCK++ + EA   L  MV RG+ PN  TY++++ GFC +G+ N A  LF  M   
Sbjct: 122 TIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVER 181

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               D V++NIL++G  K   + EA  ++  M+ KG++P V TYN L  G     Q++ A
Sbjct: 182 NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA 241

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            KLF+ M R G A   R+Y   I G CK+G I EA  L   +       D   Y+ L+ G
Sbjct: 242 QKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKG 301

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C+ GR + A +L   +    L+P+++TY+I++ GLC  G +D+A +L   M+E+   P+
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
           +  + +LI G     +     EL   +  K + PD    ++++  L+K  +S
Sbjct: 362 IFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLS 413



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 193/411 (46%), Gaps = 34/411 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNIL-----LASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           +A  +FD M++M   P  ++   I+     + S         ++   G  PN+  Y+ +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   ++        ++    +PN  T++S++ G     R  EA +LF ++      
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV---------------------- 201
           P+ +T+N L++GL + G  + A  +FE M     E  V                      
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 202 -------VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                   C P+  +Y+ +I G CK G +D+AK L  +M  + + PD VTY++L+ G C 
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                +A++L  EM   G+ P ++T+++++D LCK   +DEA  LL  M +  + PN   
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y  L+ G C  GK+  A ELF ++   G + D V+Y ++I+G  K     EA  L+R+M 
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMA 424

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
             G  P   TYN +  G        +A +L +EM   G +AD+ T+    D
Sbjct: 425 VHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 203/589 (34%), Positives = 328/589 (55%), Gaps = 51/589 (8%)

Query: 21  FRSNFSSLLVHFRD-LTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
           +  +F+S    +R+ L  R  DI  I  ++A  +F  M++  P P  V  FN LL+++AK
Sbjct: 39  WERSFASASGDYREILRNRLSDI--IKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAK 95

Query: 80  NKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--------- 124
              ++       ++   G+  +LYTY+I INCFC+  ++SL      ++++         
Sbjct: 96  MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155

Query: 125 -------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
                   C                   + P+  TF +LI GL   ++  EA AL  ++ 
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC+P+++TY T++NGLC+ G   +AL+L ++M  G  E  VV       Y+TIIDGLC
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------IYNTIIDGLC 269

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   +D A  LF +M ++ I PDV TY+SLI  LC+   W++A RL  +M+++ + P+VV
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TF+ ++D   K  K+ EA +L D M++R + P+  TY++L++GFC+  +++ A+ +F  M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S  C  + V+Y+ LI G+CK K VEE + L+REM  +G+    VTY TL  G F+    
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           ++A  +F +M   GV  +  TY   +DGLCKNG + +A+ +F  L+    E DI  YN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+G+CK+G+++  WELFC+L    + PNV+ YN MI G C  G  ++A  L   M+E+  
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            P+  T++ LI   +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 247/507 (48%), Gaps = 14/507 (2%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +PP V SF  L  S    + + +   A+G +       IL N    I +V      FG +
Sbjct: 23  NPPTVPSFFNLCGSGCWERSFAS---ASGDYRE-----ILRNRLSDIIKVDDAVDLFGDM 74

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           ++S   P+   FN L+  +   ++     +L  +++  G   ++ TY+  IN  CR    
Sbjct: 75  VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            +AL +  +M     E      P+ VT S++++G C    +  A AL  QM +    PD 
Sbjct: 135 SLALAVLAKMMKLGYE------PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            T+ +LIHGL   N  +EA  L  +M+ +G QP +VT+  +++ LCK   +D A  LL  
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +  +  +   YNT++DG C    ++ A  LF  M++ G + D  +Y+ LI+  C    
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
             +A  L  +M+ + I P VVT++ L     +  ++  A KL+DEM +  +  D  TY++
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I+G C +  + EA  +F  +    C  ++  Y+ LI G CK+ R++   ELF  +    
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           LV N VTY  +I G       D A+ +F  M      P+++T+++L+ G  +  + +K  
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +   ++   + PD    +I+++ + K
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCK 515



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 229/441 (51%), Gaps = 6/441 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ +A  LF  +      P+++ +N L++ + +     + ++L E+M      +G+    
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SH 116

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  TYS  I+  C+   +  A A+  +M      PD+VT +SL++G CH+   ++A  L 
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G +P   TF  ++  L  + K  EA  L+D MVQRG +P+  TY T+++G C  
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G I+ A  L   ME    + D V YN +I+G CK K +++AL+L+ EM +KGI+P V TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L   L    +   A +L  +M    +  +  T++  ID   K G ++EA +L+  +  
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              + DI  Y+ LI+G C   RL  A  +F  +      PNVVTY+ +I+G C   ++++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +LF +M +     + +T+  LIHGF +  +      +  +M    V P+    +I++D
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476

Query: 566 LLVKNEISLKSLPSFLVQERQ 586
            L KN    K++  F   +R 
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRS 497



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 183/370 (49%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  LF  M      P +V +N L+  +   N +     L  +M   G+   + T+++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            ++  C+  ++  A  +L  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D  ++  LI+G   + +  EA++L  +MV +G +P +VTY T+  GL +   ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L  +M++  + AD   Y T IDGLCK  ++ +A+ LF  +       D+  Y+ LI  L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + PNVVT++ +I     +G++ +A  L+ +M + +  PD+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T+  LI+GF   +   +   +   M  K   P+    S ++    K +   + +  F  
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 424 MSQRGLVGNT 433



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 36/278 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNIL 102
           EA  ++D M++     P + +++ L+        L + KH    + +   FPN+ TY+ L
Sbjct: 346 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  FCK  RV  G   F  + +     N  T+ +LI G         A  +F ++ + G 
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
            PN++TYN L++GLC+ G    A+ +FE +     E         I  +CK         
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      PN + Y+T+I G C++G  ++A +L  +MK++   P+  TYN+LI    
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
              D   +  L  EM   G      T  ++ + L   R
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 112/226 (49%)

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +V++A+ L+ +MV     P++V +N L   + ++++ E  + L ++MQ  G++ D  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            FI+  C+   +  A+ +   +  L  E DI   + L++G C S R+  A  L   +   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+  T+  +I GL    +  +A  L   M +    PD++T+  +++G  +  +    
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             LL KM++ K+  D  I + ++D L K +    +L  F   + +G
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 206/556 (37%), Positives = 305/556 (54%), Gaps = 60/556 (10%)

Query: 18  ISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL 77
           +S+  + F S  +HF  L            +EA   F+ ML   P PP    FN LL S+
Sbjct: 9   LSSSHNTFHSKPLHFNTL------------DEALSTFNRMLHKQP-PPSTVDFNRLLTSI 55

Query: 78  AKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           AK KH+ T      ++++ G+ P++YT  I+IN  C + RV   F A  +IL+       
Sbjct: 56  AKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILK------- 108

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
                                        G +P+  T+ TLI GLC  G    AL+LF++
Sbjct: 109 ----------------------------LGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M      IG   +PN VTY T+I+GLCK+  V +A  +F +M  + I+P++VTYNSLIHG
Sbjct: 141 M------IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHG 194

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC   +W     L  EM+D  + P V T N ++D LCK   + EA  ++D+M+ RGV PN
Sbjct: 195 LCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 254

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TYN LMDG CL  +++ A ++F +M    C  + +SYN LINGYCK + V++A+ L+ 
Sbjct: 255 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 314

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           EM  + + P  VTYNTL  GL  + +++ A+ LF EM   G   D  TY T  D LCKN 
Sbjct: 315 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 374

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           ++ +A+ L + +     + DIQ Y  ++DG+C++G L+ A +LF +L    L PNV TYN
Sbjct: 375 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 434

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           IMI GLC  G + +A  LF +M +N  +P+  T++++  GF+R NE  +  ELL +M  +
Sbjct: 435 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494

Query: 552 KVMPDASIVSIVVDLL 567
               D S  +++V +L
Sbjct: 495 GFSVDVSTTTLLVGML 510



 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 148/399 (37%), Positives = 226/399 (56%), Gaps = 19/399 (4%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P+   F  L+  +          +L T++ +FG  P+V T N LIN  C
Sbjct: 568 SFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC 627

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  A ++  ++     ++G   +P+ VTY T+++GLCK             M  + 
Sbjct: 628 HLRRLGYAFSVLAKLL----KLGF--QPDVVTYGTLMNGLCK-------------MITKG 668

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I+PD+ TYNSLIH LC+  +W     L  EM++  + P+VV F+ ++D LCK   +  A 
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            ++D+M++RGV P+  TY  LMDG CL  +++ A ++F +M   GC  +  SYNILINGY
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+ + +++A+ L  +M  +G+    VTYNTL  GL  + +++HA+ LF EM   G   D 
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   +D LCKN ++ EA+ L + +     + DI  YN  IDG+C++G L+ A +LF +
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 908

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
           L    L P+V TYNIMI GLC  G +D+A  LF  M+EN
Sbjct: 909 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 241/460 (52%), Gaps = 6/460 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F R+L     P+   FN L+  +          +L  ++ +FG  P+V T   +IN LC
Sbjct: 32  TFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLC 91

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  A +   ++      + +  +P+  T++T+I GLC EG + +A  LF +M  E 
Sbjct: 92  HLNRVDFAFSALAKI------LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+VVTY +LI+GLC      EA  +F EM+ +G+ P++VT+N ++  LCK  +    +
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L++ MV   + P+  T NT++D  C  G +  A ++   M   G + + V+YN L++G+
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   EV+ A+ ++  MV K     V++YNTL  G  +I  V+ A+ LF+EM R  +  +T
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T I GLC  G + +A+ LF  +       D+  Y  L D LCK+  L  A  L  +
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      P++  Y  ++ G+C  G+++ ARDLF ++      P+V T++++IHG  +   
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            ++ ++L  +M +    P+    +++    ++N  +L+++
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 485



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/548 (28%), Positives = 252/548 (45%), Gaps = 44/548 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           EA  +FD M+      P V ++  L+  L K++      N        G+ PN+ TYN L
Sbjct: 133 EALHLFDKMIG-EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK+            ++ S   P+  T N+++  L  E  + EA  +   +   G 
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           EPNV+TYN L++G C      +A+ +F+ M + +      C  N ++Y+T+I+G CK   
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKIQS 305

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VDKA  LF +M  + + P+ VTYN+LIHGLCH     +A  LF EM+ +G  P +VT+  
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           + D LCKNR +D+A  LL  +      P+   Y T++DG C  G++  A +LF ++ S G
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + +  +YNI+I+G CK   + EA  L+ EM   G  P   TYN +  G    ++    +
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTI 485

Query: 403 KLFDEMQRDGVAADTRTYTTFI-----DG--------LCK-------NGYIIEAV-ELFR 441
           +L +EM   G + D  T T  +     DG        LCK       +G  + ++  LF 
Sbjct: 486 ELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFL 545

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           +            +N L D L    R+     L    P     P+ V +  ++  +    
Sbjct: 546 SSSHNSLHSRSPHFNTLDDALSSFNRM-----LHMHPP-----PSTVDFTKLLTSIAKMK 595

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
                  L   M+     PDV T ++LI+ F  +        +L K+ +    PD     
Sbjct: 596 HYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYG 655

Query: 562 IVVDLLVK 569
            +++ L K
Sbjct: 656 TLMNGLCK 663



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 213/415 (51%), Gaps = 61/415 (14%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTY 99
           T ++A   F+ ML MHP PP    F  LL S+AK KHY T      ++++ G+ P++YT 
Sbjct: 561 TLDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           NILIN FC + R+   F    ++L+  F P+  T+ +L+ GL              K+  
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGL-------------CKMIT 666

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  P++ TYN+LI+ LC          L  EM N          PN V +ST++D LCK
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK------IMPNVVVFSTVVDALCK 720

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG +  A  +   M    + PDVVTY +L+ G C  ++ +EA ++F  M+ +G  P+V +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N++++  C+ ++MD+A  LL+ M  +G+  +  TYNTL+ G C +G++  A  LF  M 
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 340 SMG---------------CKH--------------------DDVSYNILINGYCKNKEVE 364
           + G               CK+                    D + YNI I+G C+  E+E
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            A  L+  + SKG++P V TYN +  GL +   ++ A KLF +M  + + +++ +
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 250/536 (46%), Gaps = 62/536 (11%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           + L++ GL PN++TYNI+I+  CK G ++     F  + ++  +PN  T+N + +G    
Sbjct: 419 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 478

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGL-------------CR-------TGHTMI 184
           +  +    L  ++ A G   +V T   L+  L             C+       +G  M 
Sbjct: 479 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMR 538

Query: 185 AL--------------------NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +L                     L + +++ N  + +   P+TV ++ ++  + K     
Sbjct: 539 SLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYS 598

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
              +L  QM    I PDV T N LI+  CH      A  +  +++  G QP VVT+  +M
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM 658

Query: 285 DELCKNR----------------------KMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           + LCK                        +    + LL+ MV   + PN   ++T++D  
Sbjct: 659 NGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 718

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G I  A ++   M   G + D V+Y  L++G+C   E++EA+ ++  MV KG  P V
Sbjct: 719 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 778

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            +YN L  G  +I +++ A+ L ++M   G+ ADT TY T I GLC  G +  A+ LF  
Sbjct: 779 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 838

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       D+  Y  L+D LCK+  L  A  L  ++    L  +++ YNI I G+C  G+
Sbjct: 839 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 898

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           ++ ARDLF ++      PDV T++++IHG  +     + N+L  KM E  +  +++
Sbjct: 899 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNST 954



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 242/576 (42%), Gaps = 72/576 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           ++A  +F+ M R   +P  V+ +N L+  L         ++      A G  P+L TY  
Sbjct: 307 DKAMYLFEEMSRQELTPNTVT-YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L +  CK   +         I  S + P+   + +++ G+     + +A  LF+ L + G
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +PNV TYN +I+GLC+ G    A  LF EM N NG     C PN  TY+ I  G  +  
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEM-NKNG-----CSPNDCTYNLITRGFLRNN 479

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLI-------------HGLC--------------- 253
              +   L  +M     + DV T   L+               LC               
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRS 539

Query: 254 ------------------HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
                             H N  ++A   F  M+     PS V F  ++  + K +    
Sbjct: 540 LPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYST 599

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
              L   M   G+ P+  T N L++ FC + ++  A  +   +  +G + D V+Y  L+N
Sbjct: 600 VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMN 659

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G CK             M++KGI P + TYN+L   L  + + +H   L +EM    +  
Sbjct: 660 GLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 706

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +   ++T +D LCK G I  A ++   +     E D+  Y  L+DG C    +  A ++F
Sbjct: 707 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 766

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++ H   VPNV +YNI+I G C   +MDKA  L   M       D +T++ LIHG   +
Sbjct: 767 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 826

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
                   L H+M     +PD     I++D L KN 
Sbjct: 827 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH 862



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 183/349 (52%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A + F +M  +   P  V +N L+  +      +    L  +M   G+ P V T  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC   ++D A   L  +++ G +P+A T+ TL+ G C+ GKI  A  LF  M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + V+Y  LING CK+++V EA +++ EM++KGI P +VTYN+L  GL ++ + +H  
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L +EM    +  D  T  T +D LCK G + EA ++   +     E ++  YN L+DG 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C    +  A ++F ++ H   V NV++YN +I G C    +DKA  LF +M      P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +T++ LIHG   +        L H+M  +  +PD      + D L KN 
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 374


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  365 bits (936), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 205/589 (34%), Positives = 332/589 (56%), Gaps = 54/589 (9%)

Query: 21  FRSNFSSLLVHFRD-LTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
           +  +F+S    +R+ L  R  DI  I  ++A  +F  M++  P P  V  FN LL+++AK
Sbjct: 39  WERSFASASGDYREILRNRLSDI--IKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAK 95

Query: 80  NKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--------- 124
              ++       ++   G+  +LYTY+I INCFC+  ++SL      ++++         
Sbjct: 96  MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155

Query: 125 -------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
                   C                   + P+  TF +LI GL   ++  EA AL  ++ 
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC+P+++TY T++NGLC+ G   +ALNL  +M           K N V ++TIID LC
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLC 269

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   V+ A  LF +M+ + I P+VVTYNSLI+ LC+   W++A RL   M+++ + P+VV
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFN ++D   K  K+ EA +L + M+QR + P+  TYN L++GFC+  +++ A+++F  M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S  C  +  +YN LING+CK K VE+ + L+REM  +G+    VTY T+  G F+    
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  +F +M  + V  D  TY+  + GLC  G +  A+ +F+ L+  + EL+I  YN +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+G+CK+G++  AW+LFCSL    + P+VVTYN MI GLC+   + +A DLF  M+E+  
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            P+  T++ LI   +R  + +   EL+ +M+    + DAS +S+V ++L
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 187/370 (50%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  LF  M      P +V +N L+  +   N +     L  +M   G+   + T+++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            ++  C+  ++  A  +L  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D  ++  LI+G   + +  EA++L  +MV +G +P +VTY T+  GL +   ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M+   + A+   + T ID LCK  ++  AV+LF  +       ++  YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L  ++    + PNVVT+N +I     +G++ +A  L  +M + +  PD 
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           IT+++LI+GF   N   +  ++   M  K  +P+    + +++   K +     +  F  
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 424 MSQRGLVGNT 433



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 159/332 (47%), Gaps = 23/332 (6%)

Query: 261 AKRLFIEMMDQGV--QPSVVTFNVI----------------MDELCKNR-----KMDEAS 297
           AKRLF+    QG+   P+V +F  +                  E+ +NR     K+D+A 
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   MV+    P+   +N L+     M K      L   M+++G  HD  +Y+I IN +
Sbjct: 69  DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+  ++  AL++  +M+  G +P +VT ++L  G     ++  A+ L D+M   G   DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+TT I GL  +    EAV L   +    C+ D+  Y  +++GLCK G +  A  L   
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    +  NVV +N +I  LC    ++ A DLF +ME     P+V+T++ LI+       
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            S  + LL  M EKK+ P+    + ++D   K
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  +F +M+      P + ++N L+    K K  +        ++  GL  N  TY  
Sbjct: 380 DEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I  F + G      + F +++ +    +  T++ L+ GL +  ++  A  +F  L+   
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            E N+  YNT+I G+C+ G    A +LF  ++          KP+ VTY+T+I GLC + 
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKR 549

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A  LF +MK++   P+  TYN+LI       D   +  L  EM   G      T +
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609

Query: 282 VIMDELCKNR 291
           ++ + L   R
Sbjct: 610 LVTNMLHDGR 619


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  364 bits (935), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 196/501 (39%), Positives = 296/501 (59%), Gaps = 13/501 (2%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFC 107
           F+ +L ++P+PP +  F  +L SL K   Y T ++        G+  +L T+NILINCF 
Sbjct: 44  FNRILNINPTPP-IFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFS 102

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           ++G     F  F  IL+  + PNA T  +LIKGL  + +I +A     K+ A G   N +
Sbjct: 103 QLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKV 162

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
            Y TLINGLC+ G T  AL L   +       G + +PN V Y+TIID +CK   V++A 
Sbjct: 163 CYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAF 216

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L+ +M  + I+PDVVTY++LI G C     N+A  LF +M+ + + P V TF++++D  
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK  ++ EA  +L +M+++G++P+  TY +LMDG+CL+ ++N+A+ +F +M   G   + 
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            SYNI+ING+CK K+V+EA++L++EM  K I P VVTYN+L  GL +  ++ +ALKL DE
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   GV  D  TY + +D LCKN  + +A+ L   ++    + D+  Y  LIDGLCK GR
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           LK A  +F  L        V TY +MIQG C++   DKA  L   ME+N   P+  T+++
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516

Query: 528 LIHGFIRINEPSKVNELLHKM 548
           +I      +E     +LL +M
Sbjct: 517 IILSLFEKDENDMAEKLLREM 537



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 196/355 (55%), Gaps = 12/355 (3%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N ++ S+ K    N+ +D  + + + G+ P++ TY+ LI+ FC +G+++     
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     P+  TF+ L+ G   E R+ EA  +   +   G +P+V+TY +L++G C 
Sbjct: 254 FNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCL 313

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA G    GV    N  +Y+ +I+G CK   VD+A  LF +M  +NI
Sbjct: 314 VKQVNKAKSIFNTMAQG----GVTA--NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVTYNSLI GLC +   + A +L  EM D+GV    +T+N I+D LCKN ++D+A  
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M   G++P+  TY  L+DG C  G++  A+ +F  +   G      +Y ++I G+C
Sbjct: 428 LLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC 487

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
            N   ++AL+L  +M   G  P   TY  + L LFE  + + A KL  EM   G+
Sbjct: 488 DNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 156/329 (47%), Gaps = 2/329 (0%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRL--FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           NP  +   SL   L H +  +E   +  F  +++    P +  F  I+  L K      A
Sbjct: 16  NPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTA 75

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   M   G+  +  T+N L++ F  +G  + +  +F ++   G + + ++   LI G
Sbjct: 76  ISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKG 135

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C   ++ +AL  + ++V+ G     V Y TL  GL ++ Q   AL+L   +    V  +
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 195

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y T ID +CK   + EA +L+  +       D+  Y+ LI G C  G+L  A  LF 
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    + P+V T++I++ G C +G++ +A+++   M +    PDV+T+  L+ G+  + 
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVK 315

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           + +K   + + M +  V  +    +I+++
Sbjct: 316 QVNKAKSIFNTMAQGGVTANVQSYNIMIN 344


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 208/600 (34%), Positives = 323/600 (53%), Gaps = 47/600 (7%)

Query: 5   SCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           SC  R FS  S              V +R+   R G ++ I  ++A  +F  M R  P P
Sbjct: 22  SCYGRVFSSVSDGKGK---------VSYRE-RLRSGIVD-IKEDDAVDLFQEMTRSRPRP 70

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
             +  F+ L + +A+ K YD       ++   G+  NLYT +I+INC C+  ++SL F A
Sbjct: 71  RLID-FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G+I++  + P+  TF++LI GL  E R+ EA  L  ++   G +P +IT N L+NGLC 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 179 TGHTMIALNLFEEMANGNGE---------IGVVCKP--------------------NTVT 209
            G    A+ L + M     +         + V+CK                     + V 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS IIDGLCK+G +D A  LF +M+ +    D++ Y +LI G C+A  W++  +L  +M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            + + P VV F+ ++D   K  K+ EA  L   M+QRG+ P+  TY +L+DGFC   +++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A  +   M S GC  +  ++NILINGYCK   +++ L L+R+M  +G+    VTYNTL 
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  E+ ++E A +LF EM    V  D  +Y   +DGLC NG   +A+E+F  +   K E
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           LDI  YN +I G+C + ++  AW+LFCSLP   + P+V TYNIMI GLC  G + +A  L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  MEE+  +P+  T+++LI   +   + +K  +L+ ++K      DAS +   +  L +
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 225/471 (47%), Gaps = 7/471 (1%)

Query: 111 RVSLGFIAFGRILRSCFTPNA-ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           R +L    +GR+  S        ++   ++    + +  +A  LF ++      P +I +
Sbjct: 16  RTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDF 75

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           + L + + RT    + L+L ++M     E+  +   N  T S +I+  C+   +  A + 
Sbjct: 76  SRLFSVVARTKQYDLVLDLCKQM-----ELKGIAH-NLYTLSIMINCCCRCRKLSLAFSA 129

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             ++      PD VT+++LI+GLC     +EA  L   M++ G +P+++T N +++ LC 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           N K+ +A  L+D MV+ G +PN  TY  ++   C  G+   A EL   ME    K D V 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y+I+I+G CK+  ++ A +L+ EM  KG K  ++ Y TL  G     + +   KL  +M 
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           +  +  D   ++  ID   K G + EA EL + +       D   Y  LIDG CK  +L 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  +   +      PN+ T+NI+I G C    +D   +LF  M       D +T++ LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            GF  + +     EL  +M  ++V PD     I++D L  N    K+L  F
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 211/440 (47%), Gaps = 24/440 (5%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++  ++ LI+CF K G++         +++   +P+  T+ SLI G   E+++ +A  +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              + + GC PN+ T+N LING C+       L LF +M+      GVV   +TVTY+T+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR----GVV--ADTVTYNTL 428

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G C+ G ++ AK LF +M    + PD+V+Y  L+ GLC   +  +A  +F ++    +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +  +  +N+I+  +C   K+D+A  L   +  +GV+P+  TYN ++ G C  G ++ A+ 
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           LF  ME  G   +  +YNILI  +    +  ++  L  E+   G      T         
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST--------- 599

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC--KNGYIIEAVELFRTLRILKCELD 451
               +  AL     M + G   D  T+TT +   C  +N  + +A  LF+ ++ +  + +
Sbjct: 600 ----LRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPN 655

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN +I GL     +     +   +      PN VT +  I GLC       A  L  
Sbjct: 656 VVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLR 715

Query: 512 DMEENAAAPDVIT-FDMLIH 530
            ME +    DV T   +LIH
Sbjct: 716 KMEND--NEDVTTKKKILIH 733



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 199/405 (49%), Gaps = 9/405 (2%)

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +F  +++G G++           S I+D   KE   D A  LF +M      P ++ ++ 
Sbjct: 27  VFSSVSDGKGKVSY----RERLRSGIVD--IKE---DDAVDLFQEMTRSRPRPRLIDFSR 77

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L   +     ++    L  +M  +G+  ++ T +++++  C+ RK+  A   +  +++ G
Sbjct: 78  LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+  T++TL++G CL G+++ A EL   M  MG K   ++ N L+NG C N +V +A+
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   MV  G +P  VTY  +   + +  Q   A++L  +M+   +  D   Y+  IDGL
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK+G +  A  LF  + I   + DI  Y  LI G C +GR     +L   +    + P+V
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V ++ +I     +G++ +A +L  +M +   +PD +T+  LI GF + N+  K N +L  
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           M  K   P+    +I+++   K  +    L  F     +G V ++
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 198/423 (46%), Gaps = 44/423 (10%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLA-----SLAK 79
           FS+L+    D   +EG +      EA  +   M++   SP  V+  +++        L K
Sbjct: 320 FSALI----DCFVKEGKLR-----EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 80  NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
             H    + + G  PN+ T+NILIN +CK   +  G   F ++       +  T+N+LI+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           G     ++  A  LF ++ +    P++++Y  L++GLC  G    AL +FE++     E+
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
            +        Y+ II G+C    VD A  LF  +  + + PDV TYN +I GLC     +
Sbjct: 491 DIG------IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIM------DELCKNRKMDE----------ASRL---- 299
           EA  LF +M + G  P+  T+N+++       +  K+ K+ E          AS L    
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFAL 604

Query: 300 --LDLMVQRGVRPNACTYNTLMDGFCLM--GKINRAEELFGSMESMGCKHDDVSYNILIN 355
             L  M++ G  P+  T+ TL+  FCL     +  A  LF +M++MG K + V+YN +I 
Sbjct: 605 STLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIK 664

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G      + +   +  +M  +G +P  VT +T   GL +      A+ L  +M+ D    
Sbjct: 665 GLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDNEDV 724

Query: 416 DTR 418
            T+
Sbjct: 725 TTK 727


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 194/538 (36%), Positives = 312/538 (57%), Gaps = 14/538 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +F  M+RM P P  V  F+ L  ++   KHY         +   G+  +    NI
Sbjct: 44  DDAVSLFHRMVRMKPLPS-VIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAF 160
           + N +C   R+   F      L++    N  TFN+L+ GL AE+++ +A  LF KL +  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            CEPN + Y T++NGL + GHT   L+L   M  GN       KP+  TYS +ID LCK+
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGN------TKPDVRTYSIVIDALCKD 216

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             +D A  L  +MK +NI P++ TYNSLI GLC    W + K L  EM++  + P+V TF
Sbjct: 217 INLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTF 276

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           ++++D LCK  K+++A  ++  M+++GV P+  TY+ +MDG+CL G+++RA  +F  +  
Sbjct: 277 SILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRD 336

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G K +  SY+ILINGYCK K + +A+ L+ E+  KG+KP  VTY+T+  GL E+ ++  
Sbjct: 337 KGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGD 396

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A K+FDEM R G   D   ++T + G  K G + EA+ LF  L   + + +I  Y  +I+
Sbjct: 397 AKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVIN 456

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLCK+ R++ A  +F  LP   L+P+V TYN+MI G C +G  D+ + +   ME+N    
Sbjct: 457 GLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPA 516

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
           + IT+++++ GF R N+ S++   + +M  +    DA+   +++++L +N   +  +P
Sbjct: 517 NNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMIP 574


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 190/501 (37%), Positives = 298/501 (59%), Gaps = 12/501 (2%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFC 107
           F+ +L      P +  F  +L SL K+ HY T      ++   G+  +L   +ILINCF 
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           ++G+  L F    +IL+  + PN  T  +LIKGL  + +I +A     K+ A G   N +
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +Y TLINGLC+ G T  AL L   +       G + +PN V Y+TIID +CK   V++A 
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVVMYNTIIDSMCKVKLVNEAF 232

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L+ +M  + I+PDVVTYN+LI G C      +A  LF +M+ + + P+V TFN+++D  
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK R++ EA  +L +M+++G++P+  TYN+LMD +CL+ ++N+A+ +F ++   G   + 
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI 352

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            SY+I+I+G+CK K+V+EA++L++EM    I P VVTYN+L  GL ++ ++ +ALKL DE
Sbjct: 353 HSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   GV  D  TY + +D LCKN  + +A+ L   ++    + DI  Y  L+DGLCK+GR
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L+ A  +F  L     + +V  Y  MIQG C+ G  D++ DL   MEEN   P+ +T+++
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532

Query: 528 LIHGFIRINEPSKVNELLHKM 548
           +I      +E  K  +LL +M
Sbjct: 533 IICSLFDKDENDKAEKLLREM 553



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 225/419 (53%), Gaps = 9/419 (2%)

Query: 118 AFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +F R+L +    P+   F  ++  L   +      +L  +++  G   +++  + LIN  
Sbjct: 58  SFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCF 117

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G   ++ ++  ++     E      PN +T +T+I GLC +G + +A     ++   
Sbjct: 118 SQLGQNPLSFSVLAKILKMGYE------PNVITLTTLIKGLCLKGQIHQALQFHDKVVAL 171

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             + + V+Y +LI+GLC     + A +L   +  + VQP+VV +N I+D +CK + ++EA
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   MV +G+ P+  TYN L+ GFC++GK+  A +LF  M       +  ++NIL++G
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +CK + ++EA ++   M+ +GIKP V TYN+L      + +V  A  +F+ + + GV  +
Sbjct: 292 FCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             +Y+  I G CK   + EA+ LF+ +       D+  YN LIDGLCK G++ +A +L  
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVD 411

Query: 477 SLPHGVLVP-NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
            + H   VP + +TYN ++  LC + Q+DKA  L   M++    PD+ T+  L+ G  +
Sbjct: 412 EM-HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/355 (35%), Positives = 191/355 (53%), Gaps = 12/355 (3%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N ++ S+ K    N+ +D  + + + G+ P++ TYN LI+ FC +G++      
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN  TFN L+ G   E R+ EA  +   +   G +P+V TYN+L++  C 
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCL 329

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  ++    + GV   PN  +YS +I G CK   VD+A  LF +M   NI
Sbjct: 330 VKEVNKAKHIFNTIS----QRGV--NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVTYNSLI GLC     + A +L  EM D+GV    +T+N I+D LCKN ++D+A  
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 443

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M   G++P+ CTY TL+DG C  G++  A  +F  +   G   D   Y  +I G+C
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
            +   +E+L L  +M   G  P  VTY  +   LF+  + + A KL  EM   G+
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 152/314 (48%), Gaps = 3/314 (0%)

Query: 254 HANDWNEAKRL--FIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           H ND N+   +  F  ++ Q   +PS+  F  I+  L K+        L   M   G+  
Sbjct: 46  HENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITS 105

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +    + L++ F  +G+   +  +   +  MG + + ++   LI G C   ++ +AL  +
Sbjct: 106 DLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFH 165

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            ++V+ G     V+Y TL  GL ++ Q   AL+L   +    V  +   Y T ID +CK 
Sbjct: 166 DKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 225

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             + EA +L+  +       D+  YN LI G C  G++K A +LF  +    + PNV T+
Sbjct: 226 KLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTF 285

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           NI++ G C + ++ +A+++   M +    PDV T++ L+  +  + E +K   + + + +
Sbjct: 286 NILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQ 345

Query: 551 KKVMPDASIVSIVV 564
           + V P+    SI++
Sbjct: 346 RGVNPNIHSYSIMI 359



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 134/276 (48%)

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           + K +  S    L+ Q+  +P+   +  ++         +    L   ME  G   D V 
Sbjct: 50  DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
            +ILIN + +  +   + S+  +++  G +P V+T  TL  GL    Q+  AL+  D++ 
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   +  +Y T I+GLCK G    A++L R +     + ++  YN +ID +CK   + 
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A++L+  +    + P+VVTYN +I G C  G+M  A DLF  M      P+V TF++L+
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            GF +     +   +L  M ++ + PD    + ++D
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  360 bits (925), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 203/571 (35%), Positives = 308/571 (53%), Gaps = 18/571 (3%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK 81
            SN + LL+  R+L       N+   +EA  +F  M RM P  P V  F +LL ++ + K
Sbjct: 35  HSNGTQLLISMRNLCWSGKLKNI---DEALDLFQGMARMKP-LPSVKDFTLLLGAIVRLK 90

Query: 82  HYDTRLN-------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
           HY T ++       + G+  +  T NI+INC C++  V+ GF   G + +    P   T 
Sbjct: 91  HYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTL 150

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
            +LI GL  +  + +A  L   ++      +V TY  LINGLC+TG T+ A+    +M  
Sbjct: 151 TTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEE 210

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
            N       KPN V YSTI+DGLCK+G V +A  L  +M  + + P++VTY  LI GLC+
Sbjct: 211 RN------WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCN 264

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
              W EA  L  EMM  G++P +   N+++D  CK  K+ +A  ++  M+  G  P+  T
Sbjct: 265 FGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFT 324

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN+L+  +CL  K+N A  +F  M S G   D V +  LI+G+CK+K + +A+ L  EM 
Sbjct: 325 YNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMS 384

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
             G  P V T+ TL  G  +  +   A +LF  M + G   + +T    +DGLCK   + 
Sbjct: 385 KMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLS 444

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EAV L + +     +L+I  Y+ L+DG+C +G+L  AWELF SLP   L  NV  Y IMI
Sbjct: 445 EAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMI 504

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +GLC  G +DKA DL ++MEEN   P+  T+++ + G +   E ++  + L  M++K   
Sbjct: 505 KGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFS 564

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
            DA+    +++ L  NE   K +  FL ++R
Sbjct: 565 VDAATTEFIINYLSTNEGDTK-IREFLFRKR 594



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 170/368 (46%), Gaps = 1/368 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFN 281
           +D+A  LF  M      P V  +  L+  +     +  A  L   M    G++   +T N
Sbjct: 57  IDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLN 116

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++++ LC+ + +     +L  M + G+ P   T  TL++G C+ G + +A  L   ME M
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKM 176

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               D  +Y +LING CK  +   A+   R+M  +  KP VV Y+T+  GL +   V  A
Sbjct: 177 WYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L L  EM   GV  +  TY   I GLC  G   EA  L   +  +    D+Q  N L+D 
Sbjct: 237 LNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDA 296

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            CK G++  A  +   +      P+V TYN +I   C   +M++A  +F  M      PD
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPD 356

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
           ++ F  LIHG+ +    +K   LL +M +   +PD +  + ++    +    L +   FL
Sbjct: 357 IVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFL 416

Query: 582 VQERQGEV 589
              + G+V
Sbjct: 417 NMHKYGQV 424


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 194/538 (36%), Positives = 306/538 (56%), Gaps = 50/538 (9%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
           FSS    +R++  R G ++ +  ++A  +F  M++  P  P +  FN LL+++AK K +D
Sbjct: 46  FSSGSGDYREIL-RNG-LHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFD 102

Query: 85  ------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-------------- 124
                  ++   G+  NLYTYNILINCFC+  ++SL     G++++              
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 125 --SC-------------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
              C                   + P+  TF +LI GL   ++  EA AL  ++   GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN++TY  ++NGLC+ G   +A NL  +M     E       N V YST+ID LCK    
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHE 276

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A  LF +M+++ + P+V+TY+SLI  LC+   W++A RL  +M+++ + P+VVTFN +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D   K  K+ EA +L D M++R + P+  TY++L++GFC+  +++ A+ +F  M S  C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + V+YN LING+CK K ++E + L+REM  +G+    VTY TL  G F+    ++A  
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F +M  DGV  +  TY T +DGLCKNG + +A+ +F  L+  K E  I  YN +I+G+C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           K+G+++  W+LFCSL    + P+V+ YN MI G C  G  ++A  LF  M E+   PD
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 227/451 (50%), Gaps = 6/451 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +++S   P+   FN L+  +    +     +L  K++  G   N+ TYN LIN  CR
Sbjct: 73  FGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 132

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +AL L  +M     E      P+ VT S++++G C    +  A AL  QM +   
Sbjct: 133 RSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +T+ +LIHGL   N  +EA  L   M+ +G QP++VT+ V+++ LCK   +D A  
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ M    +  N   Y+T++D  C     + A  LF  ME+ G + + ++Y+ LI+  C
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             +   +A  L  +M+ + I P VVT+N L     +  ++  A KL+DEM +  +  D  
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY++ I+G C +  + EA  +F  +    C  ++  YN LI+G CK+ R+    ELF  +
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               LV N VTY  +I G       D A+ +F  M  +   P+++T++ L+ G  +  + 
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            K   +   ++  K+ P     +I+++ + K
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 245/486 (50%), Gaps = 15/486 (3%)

Query: 88  NATGLF---------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
           +A GLF         P+++ +N L++   K+ +  L      ++ R   + N  T+N LI
Sbjct: 68  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
                 S+I  A AL  K+   G EP+++T ++L+NG C       A+ L ++M     E
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV----E 183

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
           +G   +P+T+T++T+I GL       +A AL  +M      P++VTY  +++GLC   D 
Sbjct: 184 MGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           + A  L  +M    ++ +VV ++ ++D LCK R  D+A  L   M  +GVRPN  TY++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C   + + A  L   M       + V++N LI+ + K  ++ EA  LY EM+ + I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P + TY++L  G     +++ A  +F+ M       +  TY T I+G CK   I E VE
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           LFR +       +   Y  LI G  ++     A  +F  +    + PN++TYN ++ GLC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G+++KA  +F  ++ +   P + T++++I G  +  +     +L   +  K V PD  
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541

Query: 559 IVSIVV 564
           I + ++
Sbjct: 542 IYNTMI 547



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 239/473 (50%), Gaps = 12/473 (2%)

Query: 115 GFIAFGRILRSCFTPNAATFNSLIK-GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
           G   +GR     F+  +  +  +++ GLH+  ++ +A  LF  +      P++  +N L+
Sbjct: 38  GMCYWGR----AFSSGSGDYREILRNGLHS-MKLDDAIGLFGGMVKSRPLPSIFEFNKLL 92

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           + + +     + ++L E+M      +G+    N  TY+ +I+  C+   +  A AL  +M
Sbjct: 93  SAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQISLALALLGKM 146

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
                 P +VT +SL++G CH    ++A  L  +M++ G +P  +TF  ++  L  + K 
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA  L+D MVQRG +PN  TY  +++G C  G I+ A  L   ME+   + + V Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+  CK +  ++AL+L+ EM +KG++P V+TY++L   L    +   A +L  +M    +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  T+   ID   K G ++EA +L+  +     + DI  Y+ LI+G C   RL  A  
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           +F  +      PNVVTYN +I G C   ++D+  +LF +M +     + +T+  LIHGF 
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           +  +      +  +M    V P+    + ++D L KN    K++  F   +R 
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 181/370 (48%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  LF  M      P +  +N L+  +     ++    L  +M   G+  ++ T+N+
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  LL  M++ G  P+  T ++L++G+C   +I+ A  L   M  MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D +++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +   ++ A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M+   + A+   Y+T ID LCK  +  +A+ LF  +       ++  Y+ LI  L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C   R   A  L   +    + PNVVT+N +I     +G++ +A  L+ +M + +  PD+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T+  LI+GF   +   +   +   M  K   P+    + +++   K +   + +  F  
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 426 MSQRGLVGNT 435



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 1/236 (0%)

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL NG   + ++++A+ L+  MV     P++  +N L   + ++ + +  + L ++MQR 
Sbjct: 56  ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G++ +  TY   I+  C+   I  A+ L   +  L  E  I   + L++G C   R+  A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   +      P+ +T+  +I GL    +  +A  L   M +    P+++T+ ++++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  +      LL+KM+  K+  +  I S V+D L K      +L  F   E +G
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 200/557 (35%), Positives = 300/557 (53%), Gaps = 17/557 (3%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK 81
            SN +  L+  R+L  + G +  I  +EA  +F  M  M P  P V  F +LL  + + K
Sbjct: 35  HSNGTQFLISMRNLC-KSGKVKNI--DEALDLFQGMASMKP-LPSVKDFTLLLGVIVRLK 90

Query: 82  HYDTRLN-------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
           HY T ++       + G+  +  T NI+INC C++  V+ GF   G + +    P   T 
Sbjct: 91  HYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTL 150

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
            +LI GL  +  + +A  L   ++      +V TY  LINGLC+TG T+ A+    +M  
Sbjct: 151 TALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEE 210

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
            N       KPN V YSTI+DGLCK+G V +A  L  +M  + + P++VTY  LI GLC+
Sbjct: 211 RNW------KPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCN 264

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
              W E   L  EM+  G++  + T N+++D  CK  K+ +A  ++  M+  G  P+  T
Sbjct: 265 FGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFT 324

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN+L+  +CL  K+N A  +F  M S GC  D V +  LI+G+CK+K + + + L  EM 
Sbjct: 325 YNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMA 384

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
             G  P VVT+ TL  G  +  +   A +LF  M + G   + +T    +DGLCK   + 
Sbjct: 385 KMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLS 444

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EAV L   +     +L+I  Y+ L+DG+C +G+L  AWELF SLP   L  NV TY IMI
Sbjct: 445 EAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMI 504

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +GLC  G +DKA DL ++MEEN   PD  T+++ + G +   E ++  + L  M++K   
Sbjct: 505 KGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFS 564

Query: 555 PDASIVSIVVDLLVKNE 571
            DA+   I ++ L  NE
Sbjct: 565 VDAATTEITINYLSTNE 581



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 1/185 (0%)

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDI 452
           ++  ++ AL LF  M         + +T  +  + +  +   A+ L + +   L  E D 
Sbjct: 53  KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADT 112

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
              N +I+ LC+   + F + +  ++    L P V+T   +I GLC  G + +A  L   
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDH 172

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           ME+     DV T+ +LI+G  +  +     E L KM+E+   P+  + S ++D L K+ +
Sbjct: 173 MEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232

Query: 573 SLKSL 577
             ++L
Sbjct: 233 VSEAL 237


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  357 bits (917), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 192/502 (38%), Positives = 290/502 (57%), Gaps = 12/502 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCF 106
           +F+ +L  +   PP   F  +L SL K K Y T L+ +      G+ P+  T N+L+NCF
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
            ++G +   F  F +IL+  + P+A TF  LIKGL  +  + +A     K+ A G + + 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           ++Y TLINGLCR G T  A+ L   +       G + +PN V YSTIID +CK+  V+ A
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVD------GKLVRPNVVMYSTIIDSMCKDKLVNDA 217

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L+ +M  + I+PDVVTY+SLI G C       A  LF  M+   + P+V TF++++D 
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK  K+ EA  +L +M+++ V+ +  TYN+LMDG+CL+ ++N+A+ LF  M   G   D
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD 337

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             SY+I+ING+CK K V+EA+ L+ EM  K I P VVTYN+L  GL +  +   AL+L D
Sbjct: 338 VWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVD 397

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           EM   G  ++  TY + +D +CKN ++ +A+ L   ++    + DI  Y  LI+GLCK G
Sbjct: 398 EMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVG 457

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           RL  A ++F  L      PN+ TY  +I G CN G  D+   +   M++N   P+ IT++
Sbjct: 458 RLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYE 517

Query: 527 MLIHGFIRINEPSKVNELLHKM 548
           +LIH     +E  K  +LL +M
Sbjct: 518 ILIHSLFEKDENDKAEKLLREM 539



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 236/439 (53%), Gaps = 7/439 (1%)

Query: 119 FGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           F R+L ++   P A  F  ++  L    +   A +L  +++  G +P+ IT N L+N   
Sbjct: 45  FNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFS 104

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + GH   + ++F ++            P+ VT++ +I GLC +G V KA     ++  + 
Sbjct: 105 QLGHIKFSFSVFAKILKKGYH------PDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
              D V+Y +LI+GLC   +   A +L   +  + V+P+VV ++ I+D +CK++ +++A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   MV + + P+  TY++L+ GFC++GK+  A +LF  M S     +  +++ILI+G+
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +V EA ++   M+ K +K  VVTYN+L  G   + QV  A  LF+ M + GV  D 
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y+  I+G CK   + EA++LF  +   +   ++  YN L+DGLCKSGR   A EL   
Sbjct: 339 WSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE 398

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +       N++TYN ++  +C +  +DKA  L   ++E    PD+ T+ +LI+G  ++  
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458

Query: 538 PSKVNELLHKMKEKKVMPD 556
                ++   +  K   P+
Sbjct: 459 LDDAQKVFEDLLVKGYSPN 477



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 194/355 (54%), Gaps = 12/355 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ S+ K+K  +   +      +  + P++ TY+ LI+ FC +G++      
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R++     PN  TF+ LI G   E ++ EA  +   +     + +V+TYN+L++G C 
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A +LF  MA    + GV   P+  +YS +I+G CK   VD+A  LF +M  + I
Sbjct: 316 VKQVNKAKSLFNVMA----QRGVT--PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTYNSL+ GLC +   + A  L  EM D+G   +++T+N I+D +CKN  +D+A  
Sbjct: 370 FPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  + ++G++P+  TY  L++G C +G+++ A+++F  +   G   +  +Y  LING+C
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFC 489

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
                +E L++  +M   G  P  +TY  L   LFE  + + A KL  EM   G+
Sbjct: 490 NKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 196/383 (51%), Gaps = 5/383 (1%)

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           LF  + + N  I     P  + +  I+  L K      A +L  QM+   I PD +T N 
Sbjct: 44  LFNRLLHKNNPI-----PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNL 98

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L++          +  +F +++ +G  P  VTF +++  LC   ++ +A    D +V +G
Sbjct: 99  LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            + +  +Y TL++G C +G+   A +L   ++    + + V Y+ +I+  CK+K V +A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            LY EMVSK I P VVTY++L  G   + ++++A+ LF+ M  D +  +  T++  IDG 
Sbjct: 219 DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK G + EA  +   +     +LD+  YN L+DG C   ++  A  LF  +    + P+V
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDV 338

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            +Y+IMI G C    +D+A  LF +M      P+V+T++ L+ G  +    S   EL+ +
Sbjct: 339 WSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE 398

Query: 548 MKEKKVMPDASIVSIVVDLLVKN 570
           M ++    +    + ++D + KN
Sbjct: 399 MHDRGQPSNIITYNSILDAICKN 421



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 208/407 (51%), Gaps = 8/407 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           P  I +  ++  L +      AL+L ++M  NG        KP+ +T + +++   + G 
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNG-------IKPDFITCNLLMNCFSQLGH 108

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +  + ++F ++  +  +PD VT+  LI GLC   + ++A     +++ QG Q   V++  
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC+  +   A +LL  +  + VRPN   Y+T++D  C    +N A +L+  M S  
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D V+Y+ LI+G+C   +++ A+ L+  M+S  I P V T++ L  G  +  +V  A 
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +   M +  V  D  TY + +DG C    + +A  LF  +       D+ +Y+ +I+G 
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK   +  A +LF  +    + PNVVTYN ++ GLC  G+   A +L  +M +     ++
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNI 408

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           IT++ ++    + N   K   LL K+KEK + PD    +++++ L K
Sbjct: 409 ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 35/193 (18%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  + +  +   L +  Q + AL L  +M+ +G+  D                       
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPD----------------------- 92

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
                 + C       N L++   + G +KF++ +F  +      P+ VT+ I+I+GLC 
Sbjct: 93  -----FITC-------NLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCL 140

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++ KA      +       D +++  LI+G  R+ E     +LL ++  K V P+  +
Sbjct: 141 KGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVM 200

Query: 560 VSIVVDLLVKNEI 572
            S ++D + K+++
Sbjct: 201 YSTIIDSMCKDKL 213


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 196/556 (35%), Positives = 310/556 (55%), Gaps = 60/556 (10%)

Query: 18  ISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL 77
           +S+ ++NF S  +HF  L            ++A   F  ML MHP PPP+  F  LL S+
Sbjct: 20  LSSSQNNFQSKSLHFNTL------------DDALSSFHRMLHMHP-PPPIFEFAKLLTSI 66

Query: 78  AKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           AK KHY T      ++++ G+ P++YT  I+IN FC + RV        +IL+       
Sbjct: 67  AKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILK------- 119

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
                                        G +P+  T+ TL+ GLC  G    AL++F++
Sbjct: 120 ----------------------------LGHQPDTATFTTLVRGLCVVGKIGEALDVFDK 151

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M      +G   +PN VTY T+++GLCK+  + +A  LF +M  + I+PD+ TYNSLIH 
Sbjct: 152 M------VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHA 205

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC+  +W     L  EM+   + P+VV+ N+++D LCK  K+ EA  ++D+M+Q GV P+
Sbjct: 206 LCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPD 265

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TY  LMDG CL  +++ A ++F  M   GC  + VSYN LINGYCK + +++A+ L+ 
Sbjct: 266 VVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFE 325

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           EM  + + P  +TY+TL  GL  + +++ A+ LF+EM   G   +  TY+  +D LCKN 
Sbjct: 326 EMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNH 385

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EA+ L + +     + D+Q YN  IDG+C++G L+ A +LF +L    L P+V T+N
Sbjct: 386 RLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHN 445

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           IMI+GLC  G +D+A  LF +M+EN    +  T++ +  G ++ N+ S+  +LL +M  +
Sbjct: 446 IMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505

Query: 552 KVMPDASIVSIVVDLL 567
               D S  +++V +L
Sbjct: 506 GFSADVSTTALLVKML 521



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 241/460 (52%), Gaps = 6/460 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P    F  L+  +          +L  K+ +FG  P+V T   +IN  C
Sbjct: 43  SFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFC 102

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  AL++  ++      + +  +P+T T++T++ GLC  G + +A  +F +M  E 
Sbjct: 103 HLNRVDFALSVLAKI------LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+VVTY +L++GLC      EA  LF EM+ +G+ P + T+N ++  LC   +    +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL+ MV+  + PN  + N ++D  C  GK+  A ++   M   G + D V+Y  L++G+
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   E++EA+ ++  MV  G    VV+YNTL  G  +I +++ A+ LF+EM R  +  +T
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY+T I GLC  G + +A+ LF  +       ++  Y+ L+D LCK+ RL  A  L  +
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L P+V  YNI I G+C  G ++ ARDLF ++      PDV T +++I G  +   
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             + ++L  +M E   + +    + +   L++N  + +++
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAI 496



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 217/431 (50%), Gaps = 7/431 (1%)

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           K LH  + + +A + F ++      P +  +  L+  + +  H    L+L ++M      
Sbjct: 30  KSLHFNT-LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKM----DS 84

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
            G+   P+  T + +I+  C    VD A ++  ++      PD  T+ +L+ GLC     
Sbjct: 85  FGI--PPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKI 142

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
            EA  +F +M+ +G QP+VVT+  +M+ LCK+R++ EA  L   M+ +G+ P+  TYN+L
Sbjct: 143 GEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C + +      L   M       + VS NI+++  CK  +V EA  +   M+  G+
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +P VVTY  L  G     +++ A+K+FD M R+G   +  +Y T I+G CK   I +A+ 
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           LF  +   +   +   Y+ LI GLC  GRL+ A  LF  +     +PN+VTY+I++  LC
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            + ++ +A  L   +E +   PDV  +++ I G  R  +     +L   +  + + PD  
Sbjct: 383 KNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVW 442

Query: 559 IVSIVVDLLVK 569
             +I++  L K
Sbjct: 443 THNIMIRGLCK 453


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 196/541 (36%), Positives = 307/541 (56%), Gaps = 17/541 (3%)

Query: 21  FRSNFSSLLVH-FRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
           F  N     +H F   TT   + +V+   +A  +F+ +LR +P+PP +  F  +L SL K
Sbjct: 27  FPENTHFYFIHSFSTSTTFHNNNDVV---DAVSLFNCLLRQNPTPPDME-FGQILGSLVK 82

Query: 80  NKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           +KHY T      ++   G+ PN   +NILINCFC++G +   F    +IL+  + P+  T
Sbjct: 83  SKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTIT 142

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
            N+ IKG   + +I +A     KL A G   + ++Y TLINGLC+ G T  AL L   + 
Sbjct: 143 LNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVD 202

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                 G + + + V YSTIID +CK+  V+ A  L+ +M    I+ ++VTY++LI G C
Sbjct: 203 ------GKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC 256

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                 +A  LF +M  + + P V TFN+++D  CK  ++ EA   L +M+++G++P+  
Sbjct: 257 IVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIV 316

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYN+LMDG+CL+ ++N A+ +  +M   G      SYNI+ING+CK K V++A+ L++EM
Sbjct: 317 TYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM 376

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             K I P V+TYN+L  GL +  ++ +AL+L D M   G   D  TY++ +D LCKN  +
Sbjct: 377 HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLV 436

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A+ L   L+      ++  Y  LIDGLCK GRL+ A  +F  L        V TY +M
Sbjct: 437 DKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVM 496

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           IQG C+ G  D+A  L   M++N+  PD IT++++I      +E  K  +LL +M  + +
Sbjct: 497 IQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556

Query: 554 M 554
           +
Sbjct: 557 L 557



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 210/444 (47%), Gaps = 37/444 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++ +  + P++YT+NIL++ FCK GRV         +++    P+  T+NSL+ G    +
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            +  A ++   +   G    V +YN +ING C+      A+ LF+EM +          P
Sbjct: 330 EVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ------IFP 383

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N +TY+++IDGLCK G +  A  L   M D    PD++TY+S++  LC  +  ++A  L 
Sbjct: 384 NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL 443

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           I++ DQG++P++ T+ +++D LCK  ++++A  + + ++ +G      TY  ++ GFC  
Sbjct: 444 IKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  + A  L   M+   C  D ++Y I+I       E ++A  L REM+++G+  + + Y
Sbjct: 504 GLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEY 563

Query: 386 NTLFLGLFE--IHQVEHALKLFDEMQRDGVAADTRTYTTFIDG-LCKNGYIIEAVELFRT 442
            +  L       H + +        Q  G  A       + D  L K+    + VE    
Sbjct: 564 GSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSV 623

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +    C+   Q Y                            + +V TY +MIQG C+ G 
Sbjct: 624 IIYSTCDWSKQGY----------------------------ILDVNTYTVMIQGFCSHGL 655

Query: 503 MDKARDLFLDMEENAAAPDVITFD 526
            D++  L   ME N   PD +T+D
Sbjct: 656 FDESLALLSKMEVNGCIPDAVTYD 679



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 185/383 (48%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + +  I+  L K        +LF +M+   I P+ V +N LI+  C       A  +
Sbjct: 68  PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G +P  +T N  +   C   ++ +A    D +V  G   +  +Y TL++G C 
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+   A EL   ++    + D V Y+ +I+  CK+K V +A  LY EMVS+ I   +VT
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  G   + +++ A+ LF++M  + +  D  T+   +D  CK G + EA      + 
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + DI  YN L+DG C    +  A  +  ++ H  +   V +YNI+I G C    +D
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  LF +M      P+VIT++ LI G  +    S   EL+  M ++   PD    S ++
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
           D L KN +  K++   +  + QG
Sbjct: 428 DALCKNHLVDKAIALLIKLKDQG 450



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 214/429 (49%), Gaps = 6/429 (1%)

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
            H  + +++A +LF  L      P  + +  ++  L ++ H    L+LF++M       G
Sbjct: 45  FHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYR----G 100

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           +  KPN V ++ +I+  C+ G +  A ++  ++      PD +T N+ I G C     ++
Sbjct: 101 I--KPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQ 158

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A     +++  G     V++  +++ LCK  +   A  LL  +  + V+ +   Y+T++D
Sbjct: 159 ALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIID 218

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
             C    +N A +L+  M S     + V+Y+ LI+G+C   ++++A+ L+ +M S+ I P
Sbjct: 219 SMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINP 278

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            V T+N L     +  +V+ A      M + G+  D  TY + +DG C    +  A  + 
Sbjct: 279 DVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSIL 338

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
            T+        +++YN +I+G CK   +  A +LF  + H  + PNV+TYN +I GLC  
Sbjct: 339 NTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKS 398

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++  A +L   M +    PD+IT+  ++    + +   K   LL K+K++ + P+    
Sbjct: 399 GRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTY 458

Query: 561 SIVVDLLVK 569
           +I++D L K
Sbjct: 459 TILIDGLCK 467


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  355 bits (910), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 205/600 (34%), Positives = 312/600 (52%), Gaps = 57/600 (9%)

Query: 7   CNRSFSFASAPISAFRSNFSSLLVHFR--DLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           C RS   A A  S    +  S    FR   L  R G   +    +A  +F  M+R  P P
Sbjct: 19  CTRSIRHALAKKS---RDGESGEAGFRGESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLP 75

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
             V  FN L+  + + +  D       ++    +  ++Y++NILI CFC   ++      
Sbjct: 76  S-VIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG+I +  F P+  TF++L+ GL  E R+ EA  LF ++    C PNV+T+ TL+NGLCR
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCR 190

Query: 179 TGHTMIALNLFEEMA---------------NGNGEIGVVC---------------KPNTV 208
            G  + A+ L + M                +G  +IG                  KPN V
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            YS IIDGL K+G    A  L+ +M+++ I PD+ TYN +I G C +  W+EA+RL  EM
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +++ + P+VVT++ +++   K RK  EA  L D M+ RG+ PN  TYN+++DGFC   ++
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + AE +F  M + GC  D  ++N LI+GYC  K +++   L  EM   G+     TYNTL
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   +  +  AL L  +M   GV  D  T  T +DGLC NG + +A+E+F+ ++  K 
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490

Query: 449 EL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           +L           D+Q YN LI GL   G+   A EL+  +PH  +VPN +TY+ MI GL
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGL 550

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C   ++D+A  +F  M   + +PDV+TF+ L+ G+ +        EL  +M  + ++ DA
Sbjct: 551 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADA 610



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 207/448 (46%), Gaps = 58/448 (12%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKN-KHYD-----TRLNATGLFPNLYTYNILI 103
           A  +   M  M    P V  ++ ++  L K+ +H D     T +   G+FP+L+TYN +I
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + FC  GR S        +L     PN  T+++LI     E +  EA  L+ ++   G  
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGII 351

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN ITYN++I+G C+      A ++F  MA         C P+  T++T+IDG C    +
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG------CSPDVFTFNTLIDGYCGAKRI 405

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D    L  +M +  +  D  TYN+LIHG C   D N A  L  +M+  GV P +VT N +
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 465

Query: 284 MDELCKN---------------RKMD-------------------------------EAS 297
           +D LC N                KMD                               EA 
Sbjct: 466 LDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M  RG+ PN  TY+++++G C   +++ A ++F SM S     D V++N L++GY
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   V++ L L+ EM  +GI    +TY TL  G  ++  +  AL +F EM   GV  DT
Sbjct: 586 CKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDT 645

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            T  + +  L     +  AV +   L++
Sbjct: 646 ITIRSMLTVLWSKEELKRAVAMLEDLQM 673



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 221/441 (50%), Gaps = 11/441 (2%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++RS   P+   FN L+  +    R     +L+ K++      +V ++N LI   C 
Sbjct: 65  FSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCS 124

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G   +P+ VT+ST++ GLC E  V +A  LF QM     
Sbjct: 125 CSKLPFALSTFGKIT----KLGF--QPDVVTFSTLLHGLCVEDRVSEALDLFHQM----C 174

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVT+ +L++GLC      EA  L   M++ G+QP+ +T+  I+D +CK      A  
Sbjct: 175 RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALN 234

Query: 299 LLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           LL  M +   ++PN   Y+ ++DG    G+ + A  L+  M+  G   D  +YN +I+G+
Sbjct: 235 LLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGF 294

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C +    EA  L +EM+ + I P VVTY+ L     +  +   A +L+DEM   G+  +T
Sbjct: 295 CSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT 354

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY + IDG CK   +  A  +F  +    C  D+  +N LIDG C + R+    EL   
Sbjct: 355 ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHE 414

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    LV +  TYN +I G C  G ++ A DL   M  +   PD++T + L+ G     +
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474

Query: 538 PSKVNELLHKMKEKKVMPDAS 558
                E+   M++ K+  DAS
Sbjct: 475 LKDALEMFKAMQKSKMDLDAS 495



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 214/435 (49%), Gaps = 11/435 (2%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF+ +      P+VI +N L+  + R     + ++L+++M    
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
               + C  +  +++ +I   C    +  A + F ++      PDVVT+++L+HGLC  +
Sbjct: 108 ----IPC--DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVED 161

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA  LF +M     +P+VVTF  +M+ LC+  ++ EA  LLD MV+ G++PN  TY 
Sbjct: 162 RVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 217

Query: 317 TLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           T++DG C +G    A  L   ME M   K + V Y+ +I+G  K+    +A +LY EM  
Sbjct: 218 TIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE 277

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KGI P + TYN +  G     +   A +L  EM    +  +  TY+  I+   K     E
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFE 337

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A EL+  +       +   YN +IDG CK  RL  A  +F  +      P+V T+N +I 
Sbjct: 338 AEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C   ++D   +L  +M E     D  T++ LIHGF  + + +   +L  +M    V P
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 457

Query: 556 DASIVSIVVDLLVKN 570
           D    + ++D L  N
Sbjct: 458 DIVTCNTLLDGLCDN 472


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  354 bits (909), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 187/495 (37%), Positives = 292/495 (58%), Gaps = 7/495 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  PNL T + L+   C  G+V      F ++ RS F  +   +  LI  L    +   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  ++ +  C  N  TY  +I+ LC+ G  +  L +F EM N       +C PN + 
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG-----IC-PNVIV 116

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS++I+GLC+ G + +A  LF +M  + I  +V+TYNSLIH  C    W EA R F +M+
Sbjct: 117 YSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV 176

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P VVTF  ++D L K  K+ EA ++ +LM+++G  PN  TYN+L++G CL  +++
Sbjct: 177 GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMD 236

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  M   G K D +SYN LINGYC + + EEA++L+R+M  + + P++ TY  L 
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L++  ++  A +LF+ MQ  G +    TYT  +DGLCKNG I EA+++FR+L+ +K +
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK 356

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             I+ Y+ LI G+ ++ R + A E+F  +P   LVPN+VTYNIMI GLC +G++ +A  L
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F+ MEE+    D I+F+ +I GF++ N+  K  E L +M+EK   P+ S+  ++V+L   
Sbjct: 417 FVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAA 476

Query: 570 NEISLKSLPSFLVQE 584
           +  S   LP+  + E
Sbjct: 477 DAQS-SELPNNFLHE 490



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 230/461 (49%), Gaps = 41/461 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++  +G   ++  Y  LIN   K  +         R+L    + N  T+  +I  L  + 
Sbjct: 34  KMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDG 93

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
             ++   +F ++   G  PNVI Y++LINGLCR G    A+NLF+EM +         K 
Sbjct: 94  LAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG------IKA 147

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N +TY+++I   C+ G   +A   F QM  E I PDVVT+ +LI  L       EA ++F
Sbjct: 148 NVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIF 207

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+ QG  P++VT+N +++ LC + +MD A RL ++MV+RG++ +  +YNTL++G+C  
Sbjct: 208 ELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTS 267

Query: 326 GK-----------------------------------INRAEELFGSMESMGCKHDDVSY 350
           GK                                   I  A+ELF +M+  G      +Y
Sbjct: 268 GKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTY 327

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            +L++G CKN  +EEA+ ++R + S   KP++  Y+ L  G+F+  + E A+++FDE+  
Sbjct: 328 TVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPT 387

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+  +  TY   I+GLCK G ++EA  LF  +    CE D  ++N +I G  +  +++ 
Sbjct: 388 VGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQK 447

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           A E    +      PN     +++     D Q  +  + FL
Sbjct: 448 AMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELPNNFL 488



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 234/465 (50%), Gaps = 41/465 (8%)

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           ++S + PN  T ++L+KG+  E ++M+A  LF K+   G + +++ Y  LIN L +T   
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+ L   M      +  +C  N  TY  +ID LCK+G                     
Sbjct: 61  RRAVELHRRM------LSEICSGNFFTYGLVIDSLCKDGLA------------------- 95

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
                 I GL          ++F EM++ G+ P+V+ ++ +++ LC+  K+ EA  L D 
Sbjct: 96  ------IKGL----------KMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDE 139

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV +G++ N  TYN+L+   C  G    A   F  M   G   D V++  LI+   K  +
Sbjct: 140 MVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGK 199

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V+EA  ++  M+ +G  P +VTYN+L  GL   HQ++HA++LF+ M   G+  D  +Y T
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I+G C +G   EA+ LFR ++  +    I  Y  L+  L ++GR++ A ELF ++    
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             P++ TY +++ GLC +G +++A D+F  ++     P +  + +LI G  +        
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           E+  ++    ++P+    +I+++ L K    L++   F+  E  G
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG 424



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 105/215 (48%)

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +  G +P +VT +TL  G+    +V  AL+LFD+M R G   D   Y   I+ L K    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             AVEL R +    C  +   Y  +ID LCK G      ++F  + +  + PNV+ Y+ +
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I GLC  G++ +A +LF +M       +VIT++ LIH   R     +      +M  + +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
           +PD    + ++D L K     ++   F +  +QGE
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE 215



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 14/203 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  +F  M +     P ++++ ILL +L +N    T       +   G  P+L TY +L
Sbjct: 272 EAMTLFRKM-QYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVL 330

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  CK G +      F  +    + P+   ++ LI G+    R   A  +F ++   G 
Sbjct: 331 LDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGL 390

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN++TYN +INGLC+ G  + A  LF +M          C+ + ++++ II G  +E  
Sbjct: 391 VPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG------CEQDEISFNFIIRGFLQENQ 444

Query: 223 VDKAKALFLQMKDENINP-DVVT 244
           V KA     +M+++N +P D VT
Sbjct: 445 VQKAMEFLKRMREKNFSPNDSVT 467


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  354 bits (909), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 200/545 (36%), Positives = 306/545 (56%), Gaps = 18/545 (3%)

Query: 10  SFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSS 69
           S SF S P      N   L  H R   T+     +   ++A   F+++L M     P+  
Sbjct: 13  SLSFPSTP------NLFLLCRHSRLYYTQPLPSFIDNVDDAVSSFNHILHMRNPVQPIFE 66

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           FN +L+SL K  H+ T      ++    + P+L+T+NILINCFC +G ++  F    +I 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           +  F P+  T  +LIKGL    ++ EA      + A G   + ++Y TLINGLC+TG T 
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            AL +  ++       G++ +PN V Y+TIID LCK+  V  A  L  +M  + I PDVV
Sbjct: 187 AALQVLRKID------GLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY +LI+G        EA  LF +M+ + ++P V TFN+++D LCK  +M +A  +L +M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +++GV  N  TYN+LMDG+ L+ + N+A  +F +M   G   D  SY+I+ING CK K V
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA++L++EM SK + P  VTYN+L  GL +  ++  A  L +EM   G  AD  TY++ 
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +D LCKN  + +A+ L   ++    + +I  Y  L+DGLCK+GRLK A  ++  L     
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             +V  YN+M+ GLC +G  D+A  L   ME+N   PD +T++ L+      ++  K  +
Sbjct: 481 HLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVK 540

Query: 544 LLHKM 548
           LL +M
Sbjct: 541 LLREM 545



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 248/496 (50%), Gaps = 41/496 (8%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           FN ++  L   +    A +   +++    +P++ T+N LIN  C  GH   A ++  ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
               ++G    P+TVT +T+I GLC  G V +A      +  +  + D V+Y +LI+GLC
Sbjct: 127 ----KLGF--HPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLC 180

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
              +   A ++  ++    VQP+VV +N I+D LCK++ +  AS L   M+ + + P+  
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY TL+ G  ++G++  A  LF  M     K D  ++NIL++G CK  E+++A ++   M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           + +G+   +VTYN+L  G F + Q   A  +F+ M R GV  D ++Y+  I+GLCK   +
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-----PHGVLV---- 484
            EAV LF+ +       +   YN LIDGL K GR+  AW+L   +     P  V+     
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420

Query: 485 --------------------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
                                     PN+ TY I++ GLC +G++  A+ ++ D+     
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
             DV  ++++++G  +     +   L+ KM++   +PDA     +V  L +N+ + K++ 
Sbjct: 481 HLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVK 540

Query: 579 SFLVQERQGEVGESNV 594
                  QG    SN+
Sbjct: 541 LLREMIVQGSAVGSNI 556



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 188/403 (46%), Gaps = 40/403 (9%)

Query: 223 VDKAKALF---LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           VD A + F   L M++  + P +  +N ++  L   N ++ A     +M  + +QP + T
Sbjct: 44  VDDAVSSFNHILHMRNP-VQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFT 101

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           FN++++  C    ++ A  +L  + + G  P+  T  TL+ G CL GK+  A      + 
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVI 161

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           + G   D VSY  LING CK  E   AL + R++    ++P VV YNT+   L +   V 
Sbjct: 162 AKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVI 221

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           HA  L  EM    +  D  TYTT I G    G + EAV LF  + +   + D+  +N L+
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 460 DGLCKSGRLKFAWE-----------------------------------LFCSLPHGVLV 484
           DGLCK G +K A                                     +F ++    + 
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V +Y+IMI GLC    +D+A +LF +M   + AP+ +T++ LI G ++    S   +L
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +++M  +    D    S ++D L KN    K++      + QG
Sbjct: 402 VNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 8/163 (4%)

Query: 54  FDYMLRMH--PSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINC 105
           +D +  MH    P  V +++ LL +L KN   D      T++   G+ PN+YTY IL++ 
Sbjct: 399 WDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDG 458

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK GR+      +  +L   +  +   +N ++ GL  E    EA +L +K++  GC P+
Sbjct: 459 LCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPD 518

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            +TY TL+  L        A+ L  EM      +G     N++
Sbjct: 519 AVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSM 561


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  354 bits (908), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 196/519 (37%), Positives = 286/519 (55%), Gaps = 14/519 (2%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTY 99
           T ++    F+ MLR HP PPP+  F+ LL ++ +  HY T      +L++ G+ P++ T 
Sbjct: 35  TVDDTLLSFNRMLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATL 93

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            ILINC+C    +S  F   G IL+  F PN  TFN+LI G      + +A A    L A
Sbjct: 94  TILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMA 153

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G   +  +Y +LINGLC+ G T  AL L ++M         + +PN +TYST+IDGLCK
Sbjct: 154 KGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEED------LVRPNLITYSTVIDGLCK 207

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +  +  A  LF  +    I  DVV YNSLIHG C    W EA RL   M+   + P   T
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           FN+++D LCK  ++ EA  +  +M++RG +P+  TYN LM+GFCL   ++ A ELF  M 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G + D ++YN+LINGYCK   V+EA+ L++E+  K + P + TYN+L  GL ++ ++ 
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
              +L DEM   G + D  TY  F+D  CK+    +A+ LFR + +     D   Y+ ++
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIV 446

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +  CK  +LK A E    L      PNV TY IMI  LC D   D+A  L   M++N   
Sbjct: 447 ENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCP 506

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           PD +TF+ +I      NE  K  +L  +M E+ ++ D +
Sbjct: 507 PDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEA 545



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 193/377 (51%), Gaps = 2/377 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P    +  ++  + + G    A +LF Q+  + I P + T   LI+  CH    + A  L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGFC 323
              ++  G QP++VTFN +++  C N  + +A    LDLM  +G   +  +Y +L++G C
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMA-KGYPLDEFSYGSLINGLC 171

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+   A +L   ME    + + ++Y+ +I+G CK++ + +AL L+  + S+GI   VV
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            YN+L  G   + Q   A +L   M R  +  D  T+   +D LCK G I+EA  +F  +
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                + DI  YN L++G C S  +  A ELF  +    L P+V+ YN++I G C    +
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A  LF ++      P++ T++ LI G  ++   S V EL+ +M ++   PD    +I 
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 564 VDLLVKNEISLKSLPSF 580
           +D   K++   K++  F
Sbjct: 412 LDAFCKSKPYEKAISLF 428



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 183/347 (52%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD     F +M  ++  P +  ++ L+  +     +  A  LF ++  +G+ PS+ T  +
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C    +  A  LL  +++ G +PN  T+NTL++GFC+ G +++A      + + G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D+ SY  LING CKN +  +AL L ++M    ++P ++TY+T+  GL +   +  AL
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +LF  +   G+  D   Y + I G C  G   EA  L   +       D   +N L+D L
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F  +      P++VTYN +++G C    + +AR+LF  M +    PDV
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +++LI+G+ +I+   +   L  +++ K ++P+ +  + ++D L K
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 35/312 (11%)

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K   +D+     + M+++   P    ++ L+     MG    A  LF  + S G      
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +  ILIN YC    +  A SL   ++  G +P +VT+NTL  G      V  A+    ++
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G   D  +Y + I+GLCKNG   +A++L + +       ++  Y+ +IDGLCK   +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 469 KFAWELFC---------------SLPHGV--------------------LVPNVVTYNIM 493
             A  LF                SL HG                     + P+  T+NI+
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +  LC +G++ +A+ +F  M +    PD++T++ L+ GF   N  S+  EL ++M ++ +
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331

Query: 554 MPDASIVSIVVD 565
            PD    +++++
Sbjct: 332 EPDVLNYNVLIN 343



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 3/220 (1%)

Query: 371 REMVSKGIKPTVVTYNTLFLGLF---EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           R ++ + I     + +  F G     + H V+  L  F+ M R         +   +  +
Sbjct: 6   RYVLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAI 65

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            + G+   A+ LF  L        I     LI+  C    L FA+ L  ++      PN+
Sbjct: 66  VRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNM 125

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VT+N +I G C +G + KA    LD+       D  ++  LI+G  +  +     +LL K
Sbjct: 126 VTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQK 185

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           M+E  V P+    S V+D L K+ +   +L  F +   +G
Sbjct: 186 MEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG 225


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 194/525 (36%), Positives = 294/525 (56%), Gaps = 19/525 (3%)

Query: 23  SNFSSLLVHFRDL----TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLA 78
           S FS  L  F D       ++   + I  ++A  +F  ++ MHP P  V  FN++L S+ 
Sbjct: 33  SKFSVFLRFFSDSQKQNAKKKSGFDAI--DDAVALFTRLITMHPLPS-VVEFNMILGSIV 89

Query: 79  KNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           K KHY T ++ +      G+ P++ T +ILINC+C +G +   F   G +L+  +  NA 
Sbjct: 90  KMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAI 149

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T  +++KGL     + +A      + A G   + +TY TLINGLC+ G T  A  L  +M
Sbjct: 150 TLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM 209

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                  G V +PN V Y+ I+DGLCK+G V +A+ L+  +    I+PDV TY  LIHG 
Sbjct: 210 E------GQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGF 263

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C    W E  RL  +M+D+ V  +V T+N+++D LCK   + +A  + +LM++RG RP+ 
Sbjct: 264 CGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDL 323

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            T+NTLM G+CL   +  A +LF +    G   D  SYNILI GYCKN  ++EALSL+ +
Sbjct: 324 VTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNK 383

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  K + P +VTY++L  GL +  ++ +A +LF  +   G + +  TY   +D LCK   
Sbjct: 384 MNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQL 443

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + +A+ELF  +       ++ +YN LI+G CKS R+  A  LF  +    LVP+ VTYN 
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +I GLC  G++  A +LF  M +     DVIT+++L   F +I  
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQH 548



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/456 (33%), Positives = 237/456 (51%), Gaps = 14/456 (3%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R++     P+   FN ++  +        A +L  ++   G  P+++T + LIN  C 
Sbjct: 66  FTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCH 125

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            GH   A ++          +G+V K     N +T +TI+ GLC  G V KA      + 
Sbjct: 126 LGHMGFAFSV----------LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            +    D VTY +LI+GLC      EA  L  +M  Q V+P+VV +N+I+D LCK+  + 
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L   +V RG+ P+  TY  L+ GFC +G+      L   M       +  +YNILI
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +  CK   + +A  +   M+ +G +P +VT+NTL  G    + V  A KLFD     G+ 
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  +Y   I G CKN  I EA+ LF  +   K   +I  Y+ LIDGLCKSGR+ +AWEL
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F ++  G   PNV+TYNIM+  LC    +DKA +LF  M E    P+V ++++LI+G+ +
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                +   L  +M  + ++PD+   + ++D L K+
Sbjct: 476 SKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKS 511



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 221/446 (49%), Gaps = 6/446 (1%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I +A ALFT+L      P+V+ +N ++  + +  H   A++L ++M    G  G+   P+
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQM----GLRGIT--PS 112

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VT S +I+  C  G +  A ++   +       + +T  +++ GLC   +  +A     
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            ++ QG     VT+  +++ LCK     EA  LL  M  + VRPN   YN ++DG C  G
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +  A +L+  +   G   D  +Y  LI+G+C   +  E   L  +MV + +   V TYN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L   L +   +  A  + + M   G   D  T+ T + G C    ++EA +LF T    
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+ +YN LI G CK+ R+  A  LF  + +  L PN+VTY+ +I GLC  G++  A
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +LF  + +   +P+VIT+++++    +I    K  EL + M E+ + P+ S  +I+++ 
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472

Query: 567 LVKNEISLKSLPSFLVQERQGEVGES 592
             K++   +++  F    R+  V +S
Sbjct: 473 YCKSKRIDEAMNLFEEMHRRNLVPDS 498


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/539 (35%), Positives = 293/539 (54%), Gaps = 13/539 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F+ M+R+ P PPP S F+ LL ++ +  HY T      +L + G+ P++ T+ I
Sbjct: 37  DDAVTCFNRMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINC+      +  F     IL+S + PN  TFN++I G      I +A      L A G
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              +  TY TLINGL + G    AL+L +EM   +       +PN V YS +IDGLCK+G
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDG 209

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
           FV  A  L  Q+ +  I  D VTYNSLI G C    W E  +L  +M+ + V P   TFN
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D LCK  ++ EA  +L +M +RG +P+  TYN LM+G+C    ++ A ELF  M   
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + D ++YN+LI+GYCK K V+EA+ L++E+ +K + PT+ +YN+L  GL    ++ H 
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            KL DEM       D  TY   ID LCK G I+EA+ +   +     + +I  YN ++DG
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C    +  A ++F  +    L P+++ YN++I G C    +D+A  LF +M      PD
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           + +++ LI G   +     V ELL +M +    PD    +I++D   K +   K++  F
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568



 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 258/464 (55%), Gaps = 7/464 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +++   G+  +  TYN LI+  C +GR         +++R    P+  TFN LI  L  E
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            RI+EA  +   +   G +P+++TYN L+ G C   +   A  LF  M     E      
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------ 332

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ + Y+ +IDG CK   VD+A  LF ++ ++N+ P + +YNSLI GLC++   +  K+L
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             EM      P VVT+N+++D LCK  ++ EA  +L +M+++GV+PN  TYN +MDG+CL
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
              +N A+++F  M   G + D ++YN+LINGYCK + V+EA+ L++EM  K + P + +
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L  GL  + ++ H  +L DEM   G + D  TY   +D  CK     +A+ LFR + 
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI- 571

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +     D    + ++D LCK  +LK A +    L      PNV TY I+I  LC DG   
Sbjct: 572 VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFG 631

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +A  L   ME+N   PD ITF+++I   ++ NE  K  +L  +M
Sbjct: 632 EAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 217/456 (47%), Gaps = 16/456 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  +F+ M++     P V ++N+L+    K K  D        L    L P + +YN 
Sbjct: 317 HEARELFNRMVK-RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  C  GR+S        +  S   P+  T+N LI  L  E RI+EA  +   +   G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +PN++TYN +++G C   +  +A ++F  M     E      P+ + Y+ +I+G CK  
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE------PDILNYNVLINGYCKTE 489

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A  LF +M+ +N+ PD+ +YNSLI GLC+       + L  EM D G  P V+T+N
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  CK +  D+A  L   +V+ G+ P+  T + ++D  C   K+  AE+    +   
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  +  +Y ILIN  CK+    EA+ L  +M      P  +T+  +   L + ++ + A
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKA 668

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            KL +EM   G+    ++     +         ++V  F   R+         +NC  D 
Sbjct: 669 EKLREEMIARGLVNIEKSLNQSHNVFFPASSGFQSVTEF--YRVQASHAGSHRFNCTTDP 726

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           + +S ++   + +    P G +V     +   IQ L
Sbjct: 727 ISRSNQIHHRFTVQPVGPSGPMVTVHFGHRRTIQKL 762



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 199/411 (48%), Gaps = 6/411 (1%)

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR  +   A+  F  M      + V   P T  +  ++  + + G    A +LF Q++ +
Sbjct: 31  CRFRNVDDAVTCFNRM------VRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I+P + T+  LI+   H +    A  L   ++  G QP++VTFN I++  C N  + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
                 ++ +G   +  TY TL++G    G+I  A  L   ME    + + V Y+ LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK+  V +AL L  ++  +GI    VTYN+L  G   + + +   +L  +M R+ V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T+   ID LCK G I+EA  +   +     + DI  YN L++G C    +  A ELF 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L P+V+ YN++I G C    +D+A  LF ++      P + +++ LI G     
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             S V +LL +M      PD    +I++D L K    L++L   ++  ++G
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 115/239 (48%)

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           ++ L+    +      A+SL+ ++ SKGI P++ T+  L    F       A  L   + 
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATIL 117

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           + G   +  T+ T I+G C NG I +A++  + L       D   Y  LI+GL K+G++K
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  L   +    + PN+V Y+ +I GLC DG +  A  L   + E     D +T++ LI
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
            G   +    +V +LL KM  + V PD    +I++D L K    L++     +  ++GE
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/539 (35%), Positives = 293/539 (54%), Gaps = 13/539 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F+ M+R+ P PPP S F+ LL ++ +  HY T      +L + G+ P++ T+ I
Sbjct: 37  DDAVTCFNRMVRVFP-PPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINC+      +  F     IL+S + PN  TFN++I G      I +A      L A G
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              +  TY TLINGL + G    AL+L +EM   +       +PN V YS +IDGLCK+G
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDG 209

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
           FV  A  L  Q+ +  I  D VTYNSLI G C    W E  +L  +M+ + V P   TFN
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D LCK  ++ EA  +L +M +RG +P+  TYN LM+G+C    ++ A ELF  M   
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + D ++YN+LI+GYCK K V+EA+ L++E+ +K + PT+ +YN+L  GL    ++ H 
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            KL DEM       D  TY   ID LCK G I+EA+ +   +     + +I  YN ++DG
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C    +  A ++F  +    L P+++ YN++I G C    +D+A  LF +M      PD
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           + +++ LI G   +     V ELL +M +    PD    +I++D   K +   K++  F
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568



 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 258/464 (55%), Gaps = 7/464 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +++   G+  +  TYN LI+  C +GR         +++R    P+  TFN LI  L  E
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            RI+EA  +   +   G +P+++TYN L+ G C   +   A  LF  M     E      
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------ 332

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ + Y+ +IDG CK   VD+A  LF ++ ++N+ P + +YNSLI GLC++   +  K+L
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             EM      P VVT+N+++D LCK  ++ EA  +L +M+++GV+PN  TYN +MDG+CL
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
              +N A+++F  M   G + D ++YN+LINGYCK + V+EA+ L++EM  K + P + +
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L  GL  + ++ H  +L DEM   G + D  TY   +D  CK     +A+ LFR + 
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI- 571

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +     D    + ++D LCK  +LK A +    L      PNV TY I+I  LC DG   
Sbjct: 572 VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFG 631

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +A  L   ME+N   PD ITF+++I   ++ NE  K  +L  +M
Sbjct: 632 EAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 189/373 (50%), Gaps = 14/373 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  +F+ M++     P V ++N+L+    K K  D        L    L P + +YN 
Sbjct: 317 HEARELFNRMVK-RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  C  GR+S        +  S   P+  T+N LI  L  E RI+EA  +   +   G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +PN++TYN +++G C   +  +A ++F  M     E      P+ + Y+ +I+G CK  
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE------PDILNYNVLINGYCKTE 489

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A  LF +M+ +N+ PD+ +YNSLI GLC+       + L  EM D G  P V+T+N
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  CK +  D+A  L   +V+ G+ P+  T + ++D  C   K+  AE+    +   
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  +  +Y ILIN  CK+    EA+ L  +M      P  +T+  +   L + ++ + A
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKA 668

Query: 402 LKLFDEMQRDGVA 414
            KL +EM   G+ 
Sbjct: 669 EKLREEMIARGLV 681



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 199/411 (48%), Gaps = 6/411 (1%)

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR  +   A+  F  M      + V   P T  +  ++  + + G    A +LF Q++ +
Sbjct: 31  CRFRNVDDAVTCFNRM------VRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I+P + T+  LI+   H +    A  L   ++  G QP++VTFN I++  C N  + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
                 ++ +G   +  TY TL++G    G+I  A  L   ME    + + V Y+ LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK+  V +AL L  ++  +GI    VTYN+L  G   + + +   +L  +M R+ V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T+   ID LCK G I+EA  +   +     + DI  YN L++G C    +  A ELF 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L P+V+ YN++I G C    +D+A  LF ++      P + +++ LI G     
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             S V +LL +M      PD    +I++D L K    L++L   ++  ++G
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 115/239 (48%)

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           ++ L+    +      A+SL+ ++ SKGI P++ T+  L    F       A  L   + 
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATIL 117

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           + G   +  T+ T I+G C NG I +A++  + L       D   Y  LI+GL K+G++K
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  L   +    + PN+V Y+ +I GLC DG +  A  L   + E     D +T++ LI
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
            G   +    +V +LL KM  + V PD    +I++D L K    L++     +  ++GE
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 206/553 (37%), Positives = 313/553 (56%), Gaps = 26/553 (4%)

Query: 10  SFS-FASAPISAFRSN------FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHP 62
           SFS F    IS F  N      F S +  F  L  ++ +      N     F+++L +H 
Sbjct: 2   SFSAFRYVVISNFTPNPNFIGLFPSSIRLFSQLHHKQDE-----ENNLISSFNHLL-LHK 55

Query: 63  SP-PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLG 115
           +P PP   FN +L+SL K KH+ T L+        G+  + +T+NILINCF ++G  SL 
Sbjct: 56  NPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLS 115

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F  F +IL+  + P A TFN+LIKGL  +  I +A     K+ A G   + ++Y TLING
Sbjct: 116 FSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLING 175

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC+ G    AL L + +       G + +PN V Y+ IID +CK   V+ A  L+ QM  
Sbjct: 176 LCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVA 229

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + I PDV TYN+LI G    +  N A  LF +M  + + P+V TFN+++D  CK  K+++
Sbjct: 230 KRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVND 289

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  +L +M++  ++P+  TYN+LMDG+C + K+N+A+++F SM S G   +   Y  ++N
Sbjct: 290 AKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+CK K V+EA++L+ EM  + I P VVTY++L  GL ++ ++ +ALKL DEM   G   
Sbjct: 350 GFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TY++ +D LCKN ++ +A+ L   L+      D+  Y  LI GLC+SGRL+ A  +F
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVF 469

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             L       +V  Y +MIQG C+ G  DKA  L   ME+N   P+  T++++I      
Sbjct: 470 EDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEK 529

Query: 536 NEPSKVNELLHKM 548
           +E     +LL +M
Sbjct: 530 DENDTAEKLLREM 542



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 228/463 (49%), Gaps = 51/463 (11%)

Query: 114 LGFIAFGRILRSCFTPNA---ATFNSLIKGL----HAESRIMEAAALFTKLKAF-GCEPN 165
           + F AF  ++ S FTPN      F S I+      H +       + F  L       P 
Sbjct: 1   MSFSAFRYVVISNFTPNPNFIGLFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPP 60

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
              +N +++ L +  H   AL+L ++M  NG        + +  T++ +I+   + G   
Sbjct: 61  TFQFNKILSSLVKAKHHSTALSLHQQMELNG-------IESDFFTFNILINCFSQLGLNS 113

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG------------ 272
            + ++F ++  +  +P  +T+N+LI GLC     ++A     +++ QG            
Sbjct: 114 LSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLI 173

Query: 273 -----------------------VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
                                  VQP+ V +N+I+D +CK + +++A  L   MV + + 
Sbjct: 174 NGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIC 233

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  TYN L+ GF  + K+N A +LF  M+      +  ++NIL++G+CK  +V +A  +
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
              M+   IKP VVTYN+L  G   I++V  A  +FD M   GV A+ + YTT ++G CK
Sbjct: 294 LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCK 353

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
              + EA+ LF  +R  K   ++  Y+ LIDGLCK GR+ +A +L   +      PN+VT
Sbjct: 354 IKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVT 413

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           Y+ ++  LC +  +DKA  L  ++++    PD+ T+ +LI G 
Sbjct: 414 YSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGL 456



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 196/383 (51%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P T  ++ I+  L K      A +L  QM+   I  D  T+N LI+        + +  +
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +++ +G  P+ +TFN ++  LC    + +A    D +V +G   +  +Y TL++G C 
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+I  A +L   ++    + + V YN++I+  CK K V +A  LY +MV+K I P V T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L  G   + ++ +A+ LF++M+++ +  +  T+   +DG CK G + +A  +   + 
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + D+  YN L+DG C   ++  A ++F S+  G ++ NV  Y  M+ G C    +D
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A +LF +M      P+V+T+  LI G  ++       +L+ +M ++   P+    S ++
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
           D L KN    K++      + QG
Sbjct: 419 DALCKNHHVDKAIALLTNLKDQG 441



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 184/340 (54%), Gaps = 19/340 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNI 101
           N+AF ++  M+     P  V ++N L++  +     N   D   ++    + PN+YT+NI
Sbjct: 218 NDAFDLYSQMVAKRICPD-VFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ FCK G+V+   +    +++    P+  T+NSL+ G  + +++ +A  +F  + + G
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIIDGLC 218
              NV  Y T++NG C+      A+NLFEEM          C+   PN VTYS++IDGLC
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMR---------CRKIIPNVVTYSSLIDGLC 387

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G +  A  L  +M D    P++VTY+S++  LC  +  ++A  L   + DQG++P + 
Sbjct: 388 KLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMY 447

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+ +++  LC++ ++++A  + + ++ +G   +   Y  ++ GFC  G  ++A  L   M
Sbjct: 448 TYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKM 507

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           E  GC  +  +Y ++I    +  E + A  L REM+ +G+
Sbjct: 508 EDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 163/334 (48%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           +N  P    +N ++  L  A   + A  L  +M   G++    TFN++++   +      
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           +  +   ++++G  P A T+NTL+ G CL G I++A      + + G   D VSY  LIN
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G CK   +  AL L + +  K ++P  V YN +   + +   V  A  L+ +M    +  
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  TY   I G      +  A++LF  ++      ++  +N L+DG CK G++  A  + 
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + P+VVTYN ++ G C+  +++KA+D+F  M       +V  +  +++GF +I
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               +   L  +M+ +K++P+    S ++D L K
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCK 388



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 148/298 (49%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           ++ +   P    FN I+  L K +    A  L   M   G+  +  T+N L++ F  +G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + +  +F  +   G     +++N LI G C    + +AL  + ++V++G     V+Y T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL ++ ++  AL+L   +    V  +   Y   ID +CK   + +A +L+  +   +
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D+  YN LI G     +L +A +LF  +    + PNV T+NI++ G C +G+++ A+
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   M ++   PDV+T++ L+ G+  IN+ +K  ++   M    V+ +  I + +V+
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 193/504 (38%), Positives = 293/504 (58%), Gaps = 35/504 (6%)

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L+  F P+A T  +L+KG+  E+ I +A  LF ++   G   +  TY  LINGLC+   T
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 183 MIALNLFEEM-ANGNGE-------IGVVCK--------------------PNTVTYSTII 214
            +A+ L E+M  N  G+       I  +CK                    P+ V YS+++
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           DGLC+ G + +A   F +M+   I+ DV TYNSLIHGL  A  W E       M+D+G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P   TF +++D LCK  K+ EA ++L+LM  +G  P+  TYNTLM+G CL+G++  A +L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F S+   G K +  SYNILINGYCK+++++EA  L+ EM  KG+KP+ VTYNTL   L +
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +V  A KLF EMQ  G      TY   +DGLCKNG++ EA++LF++++  + + +I+ 
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           ++ L+DG+C++G+L+ AW+ F  +    L P+ + YNI+I GLCN G + +A  L   ME
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV---KNE 571
           E    PD ITF+++I   ++ NE  +  +LL +M+ +   PD ++ S+++ L     +  
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWH 548

Query: 572 ISLKSLPSFLVQERQGEVGESNVK 595
            +L SLP+ L    Q  VG   VK
Sbjct: 549 AALVSLPNAL----QKGVGSVPVK 568



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 234/458 (51%), Gaps = 50/458 (10%)

Query: 75  ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
             LA   H   + N  G   +++TY ++I+  CK G  +     F  ++ +   P+   +
Sbjct: 128 TGLAIKLHEKMKGNCKG---DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVY 184

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG---HTMIALNLFEE 191
           +SL+ GL    R+ EA   F +++  G   +V TYN+LI+GL R G        LNL  +
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
                        P+  T++ +IDGLCKEG V +A+ +   M  +   PD++TYN+L++G
Sbjct: 245 RG---------FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNG 295

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC      +A +LF  + D+G++ +V ++N++++  CK++K+DEA RL + M  +G++P+
Sbjct: 296 LCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPS 355

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TYNTL+   C  G++  A++LF  M++ G      +Y +L++G CKN  +EEA+ L++
Sbjct: 356 TVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQ 415

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            +     KP +  ++ L  G+    ++E A K FDE+ ++G+  DT  Y   I+GLC  G
Sbjct: 416 SIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKG 475

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EAV+L   +    C                                   +P+ +T+N
Sbjct: 476 MLSEAVKLLWQMEEKGC-----------------------------------LPDSITFN 500

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
           ++IQ L  + ++ +A  L  +M     +PD     ML+
Sbjct: 501 VIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 19/235 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EAF +F+ M R     P   ++N L+ +L ++    T       +   G F  L TY +
Sbjct: 338 DEAFRLFEEM-RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++  CK G +      F  I ++   PN   F+ L+ G+    ++ EA   F ++   G
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+ I YN LINGLC  G    A+ L  +M          C P+++T++ II  L KE 
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG------CLPDSITFNVIIQNLLKEN 510

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN---DWNEAKRLFIEMMDQGV 273
            + +A  L  +M++ N +PD    + L   LC A+    W+ A       + +GV
Sbjct: 511 EIHEAIQLLEEMRNRNFSPDEAVTSML---LCLASFDPQWHAALVSLPNALQKGV 562


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 202/576 (35%), Positives = 307/576 (53%), Gaps = 19/576 (3%)

Query: 3   LESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHP 62
           L S C +S +      S   SN +  L   R+   + G +  I  +EA   F  M +M+P
Sbjct: 17  LHSHCTKSTNINHEIQS--HSNKTQFLNFMRN-QCKSGKLKSI--DEALNFFHTMAKMNP 71

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKIGRVSLG 115
            P  V  F +LL  + K KHY T ++       + G+ P+ +  N++IN  C +  V+ G
Sbjct: 72  LPS-VIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFG 130

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F   G +L+    P+  TF  LI GL  +  +  A  L   ++  G   +V TY  LING
Sbjct: 131 FSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLING 190

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC+ G T  A+    +M   N        PN V YST++DGLCK+G V +A  L L+M  
Sbjct: 191 LCKMGKTSEAVGWLRKMEERNWN------PNVVVYSTVMDGLCKDGLVSEALGLCLEMSG 244

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + I P++VTY  LI GLC+   W EA  L  EMM  GV P + + N+++D LCK  K+ +
Sbjct: 245 KGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQ 304

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  ++  M+  G  P+  TYN+L+D +CL  +++ A  +F  M S GC  D V+Y  LI+
Sbjct: 305 AKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIH 364

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+CK K + +A+ L  EM+  G  P VVT+ TL  G  ++ +   A +LF  M + G   
Sbjct: 365 GWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVP 424

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           + +T    +DGLCK+  + EA+ LF  +     +L+I  Y+ ++DG+C +G+L  A ELF
Sbjct: 425 NLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             LP   L  NV  Y IMI G    G +DKA DL  +MEEN   PD  T+++ + G +  
Sbjct: 485 SCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            E ++  + L  M++K    DA+   ++++ L  N+
Sbjct: 545 REIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQ 580



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 41/302 (13%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD--TR----L 87
           D+  +EG I      +A  +  +M+ +    P V ++N L+         D  TR    +
Sbjct: 294 DVLCKEGKIM-----QAKSVIGFMILVG-EVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
            + G  P++  Y  LI+ +CKI  ++        +++  FTP+  T+ +LI G     R 
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV----- 202
           + A  LF  +  +G  PN+ T   +++GLC++     AL+LF  M   N ++ +V     
Sbjct: 408 LAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSII 467

Query: 203 ------------------CKP------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                             C P      N   Y+ +I+G  K+G +DKA+ L   M++   
Sbjct: 468 LDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGC 527

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  TYN  + GL    +   + +    M D+G      T  +I++ L  N+  +E   
Sbjct: 528 MPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELRE 587

Query: 299 LL 300
            L
Sbjct: 588 FL 589


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 193/535 (36%), Positives = 291/535 (54%), Gaps = 13/535 (2%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           NV + + A   +  M+ M P P  V  FN+L   +AK KHY T       ++  G+ PN+
Sbjct: 3   NVKSVDVALDFYHKMVTMKPFPC-VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNV 61

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            T+NI+INC C++     GF   G + +    P+  TF +++ GL  E  + +A      
Sbjct: 62  STHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDH 121

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           LK  G E +  T   +INGLC+ GH+  AL+  ++M   N      C  +   YS ++DG
Sbjct: 122 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYSAVVDG 175

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK+G V +A  LF QM  + I P++ TYN LIHGLC+ + W EA  L   MM +G+ P 
Sbjct: 176 LCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 235

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V TFNVI     K   +  A  +   M   G+  N  TYN+++   C++ ++  A E+F 
Sbjct: 236 VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFD 295

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   GC  + V+YN LI+G+C+ K + +A+    EMV+ G+ P VVT++TL  G  +  
Sbjct: 296 LMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAG 355

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +   A +LF  M + G   D +T    +DGL K  +  EA+ LFR L  +  +LDI  Y+
Sbjct: 356 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 415

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +++G+C SG+L  A ELF  L    +  +VVTYNIMI GLC +G +D A DL + MEEN
Sbjct: 416 IILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEEN 475

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              PD  T+++ + G +R  E SK  + L  MK K    +A+   ++++    N+
Sbjct: 476 GCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSANK 530



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 189/405 (46%), Gaps = 15/405 (3%)

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           H M+ +  F  + + N   G+V K     Y+T I             +L   M    + P
Sbjct: 15  HKMVTMKPFPCVKDFNLLFGIVAKMKH--YTTAI-------------SLIKHMSYIGVKP 59

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +V T+N +I+ LC  N       +   M   GV+PS+VTF  I++ LC    + +A R +
Sbjct: 60  NVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFV 119

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D +   G   +  T   +++G C +G  + A      ME   C  D  +Y+ +++G CK+
Sbjct: 120 DHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKD 179

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             V EAL L+ +M  KGI+P + TYN L  GL    + + A  L   M R G+  D +T+
Sbjct: 180 GMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 239

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
                   K G I  A  +F  +  +  E ++  YN +I   C   ++K A E+F  +  
Sbjct: 240 NVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIR 299

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
              +PN+VTYN +I G C    M+KA     +M  N   PDV+T+  LI GF +  +P  
Sbjct: 300 KGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVA 359

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
             EL   M +   +PD    +I++D L K     +++  F   E+
Sbjct: 360 AKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEK 404



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 164/367 (44%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A   + +M      P V  +N L   +     +  A  L   M   GV+P+V T N+
Sbjct: 7   VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC+         +L LM + GV P+  T+ T+++G C+ G + +A      ++ MG
Sbjct: 67  VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 126

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D  +   +ING CK      ALS  ++M  +     V  Y+ +  GL +   V  AL
Sbjct: 127 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEAL 186

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF +M   G+  +  TY   I GLC      EA  L   +       D+Q +N +    
Sbjct: 187 DLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 246

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+G +  A  +F  + H  +  NVVTYN +I   C   QM  A ++F  M      P++
Sbjct: 247 LKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNI 306

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +T++ LIHG+      +K    L +M    + PD    S ++    K    + +   F V
Sbjct: 307 VTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFV 366

Query: 583 QERQGEV 589
             + G++
Sbjct: 367 MHKHGQL 373


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 193/501 (38%), Positives = 290/501 (57%), Gaps = 28/501 (5%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFC 107
           F  ML ++P+P  V  F  +L+SL K KHY T      +L   G+ PN+ + +ILINC+C
Sbjct: 59  FHRMLLLNPAPS-VIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYC 117

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
            +G++   F  F +IL+  + PN  T  +L+KG     ++ EA      + A G   N +
Sbjct: 118 HLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQV 177

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +Y TLINGLC+ G T  AL +  ++       G +   + V YSTIIDGLCK+  V+ A 
Sbjct: 178 SYGTLINGLCKIGETRAALQMLRQIE------GKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L+ +M  + I+P VVT NSLI+G C    + EA  L  EM+ + + P V TFN+++D L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK  K+ EA   + +M++ GV P+  TY++LMDG+CL+ ++N+A+ +             
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV------------- 338

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
             Y+I+ING+CK K V++ALSL+ EM  + I P  VTYN+L  GL +  ++ +A +L DE
Sbjct: 339 --YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDE 396

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+  G  AD  TY + ID LCKN ++ +A+ L + ++    +LD+  YN LIDGLCK GR
Sbjct: 397 MRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGR 456

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           LK A  +F  L        V TY IMI GLC +G +++A  L   ME+N   PD +T + 
Sbjct: 457 LKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCET 516

Query: 528 LIHGFIRINEPSKVNELLHKM 548
           +I      ++  +  +LL +M
Sbjct: 517 IIRALFENDKNERAEKLLREM 537



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 20/386 (5%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ + +  I+  L K        +LF Q++   I P++V+ + LI+  CH      A  +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +++  G  P+ +T   ++   C N K+ EA    D ++  G   N  +Y TL++G C 
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+   A ++   +E      D V Y+ +I+G CK+K V +A  LY EM++K I PTVVT
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA-------- 436
            N+L  G   + Q + A  L  EM    +  D  T+   +D LCK G I EA        
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 437 -------VELFRTLRILKCELD-----IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
                  V  + +L    C ++        Y+ +I+G CK   +  A  LF  +    + 
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIA 368

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+ VTYN +I GLC  G++  A +L  +M ++    D+IT++ LI    + +   K   L
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIAL 428

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKN 570
           + K+K++ +  D    +I++D L K 
Sbjct: 429 VKKIKDQGIQLDMYTYNILIDGLCKQ 454



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 188/418 (44%), Gaps = 54/418 (12%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNK-----HYDTRLNATGLFPNLYTYNILIN 104
           AF IF  +L+M   P  ++   ++      +K     H+   + A G   N  +Y  LIN
Sbjct: 125 AFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLIN 184

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             CKIG          +I     + +   ++++I GL  +  + +A  L++++      P
Sbjct: 185 GLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISP 244

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK----------- 204
            V+T N+LI G C  G    A  L  EM   N           +  +CK           
Sbjct: 245 TVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGI 304

Query: 205 ---------PNTVTYSTIIDG--------------------LCKEGFVDKAKALFLQMKD 235
                    P+ VTYS+++DG                     CK   VDKA +LF +M+ 
Sbjct: 305 AVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRC 364

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             I PD VTYNSLI GLC +   + A  L  EM D G    ++T+N ++D LCKN  +D+
Sbjct: 365 RRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDK 424

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L+  +  +G++ +  TYN L+DG C  G++  A+ +F  +   G      +Y I+IN
Sbjct: 425 AIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMIN 484

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           G C    + EA +L  +M   G  P  VT  T+   LFE  + E A KL  EM   G+
Sbjct: 485 GLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 172/369 (46%), Gaps = 20/369 (5%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD   + F +M   N  P V+ +  ++  L     +     LF ++   G++P++V+ ++
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   +M  A  +   +++ G  PN  T  TL+ GFCL  K+  A      + ++G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + VSY  LING CK  E   AL + R++  K +   VV Y+T+  GL +   V  A 
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L+ EM    ++    T  + I G C  G   EA  L R + +     D+  +N L+D L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVT--------------------YNIMIQGLCNDGQ 502
           CK G++K A      +    ++P+VVT                    Y+I+I G C    
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKM 351

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +DKA  LF +M     APD +T++ LI G  +    S   EL+ +M++     D    + 
Sbjct: 352 VDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNS 411

Query: 563 VVDLLVKNE 571
           ++D L KN 
Sbjct: 412 LIDALCKNH 420


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 201/563 (35%), Positives = 304/563 (53%), Gaps = 84/563 (14%)

Query: 91  GLFPNLYTYNILINCFCKIGRV-SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G+ P++ T  +LI+ FCK G+V     +    + R C   +  T+++LIKGL  + RI E
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCIL-DIVTYSTLIKGLCMKHRISE 63

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  LF  +K  GC P+ I Y TL+ GLC+TG   IAL+L +EM N   + G+ CKP  V+
Sbjct: 64  ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS IIDGLCK+   D+A+ LF +MK + + PDV++Y SLIHG C +  W +AK LF EM+
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D G++  V T ++++D LCK  K+ EA+ LL++M+QRG   +  TY+TL+ G C+  +I+
Sbjct: 184 DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRIS 243

Query: 330 RAEELFGSMESMGCKHDD-----------------------------------------V 348
            A  LF SM+ +GC+ D                                          +
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           SY+I+I+G CK++  +EA  L++EM ++GI P V++Y TL  G     + E A  LF+EM
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIE--------------------------------- 435
              G+  D  T +  ID LCK G +IE                                 
Sbjct: 364 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRI 423

Query: 436 --AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-----PHGV-LVPNV 487
             A +LF  ++ L C  ++     L+ GLC+SG +K A EL  ++     P+G+   PN 
Sbjct: 424 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 483

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           ++Y+I+I GLC  G+ D+AR+LF +M+     PDVI++  LIHGF R  +      L ++
Sbjct: 484 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 543

Query: 548 MKEKKVMPDASIVSIVVDLLVKN 570
           M +  V PD +  S+++D+L K 
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKE 566



 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/419 (37%), Positives = 247/419 (58%), Gaps = 12/419 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+  L+     +  ++        +   G+ P++ T ++LI+  CK G+V      
Sbjct: 335 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 394

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +++    P+  T  +L+KGL  + RI +A  LF K++  GC PNV+T  TL+ GLC+
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G+  IAL L + M +     G+ CKPN ++YS IIDGLCK G  D+A+ LF +MK   +
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDV++Y SLIHG C +  W +AK LF EM+D GVQP V TF+V++D LCK  K+ EA+ 
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL++M+QRG  PN  TY TL+ G C+  +I+ A +LF  M+ +GC  D V+Y  L+ G C
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634

Query: 359 KNKEVEEALSLYREMVS------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +   ++ AL L+++M+S         KP V++Y+ +  GL +  + + A +LF EM+  G
Sbjct: 635 QTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG 694

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           V  +  +YT+ I G C++G + +A  LF  +     +L+   Y+ +I G CK G++  A
Sbjct: 695 VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 191/623 (30%), Positives = 302/623 (48%), Gaps = 123/623 (19%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S++I++  L K++  D        + A G+ P++ +Y  LI+ FC+ G+       
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178

Query: 119 FGRIL----RSCFTPNA-------------------------------ATFNSLIKGLHA 143
           F  +L    RS  T ++                                T+++LIKGL  
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           + RI EA  LF  ++  GC P+ I Y TL+ GLC+TG+   AL L +EM N  G  G+ C
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 204 KPNTVTYSTIIDGLCKE-----------------------------------GFVDKAKA 228
           KP  ++YS IIDGLCK+                                   G  +KAK 
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 229 LFLQMKDENINPDV-----------------------------------VTYNSLIHGLC 253
           LF +M D  I PDV                                   VT  +L+ GLC
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR------G 307
             +  ++A +LF++M   G  P+VVT   +M  LC++  +  A  L   M+         
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            +PNA +Y+ ++DG C  G+ + A ELF  M+++G   D +SY  LI+G+C++ + ++A 
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+ EMV  G++P V T++ L   L +  +V  A +L + M + G   +T TYTT + GL
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-----PHGV 482
           C N  I EA +LF  ++ L C  D+  Y  L+ GLC++G +K A EL   +      +G 
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 658

Query: 483 -LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+V++Y+I+I GLC  G+ D+AR+LF +M+     P+VI++  LIHGF R  +    
Sbjct: 659 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 718

Query: 542 NELLHKMKEKKVMPDASIVSIVV 564
             L ++M ++ V  +A   S+++
Sbjct: 719 KHLFNEMVDQGVQLNAVTYSVMI 741



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 170/548 (31%), Positives = 280/548 (51%), Gaps = 47/548 (8%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFT------PNAATFNSLIKG 140
           +   G  P+   Y  L+   C+ G++++       +L           P   +++ +I G
Sbjct: 71  MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDG 130

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-------- 192
           L  + R  EA  LF ++KA G  P+VI+Y +LI+G CR+G    A  LF EM        
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190

Query: 193 -ANGNGEIGVVCKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFL 231
               +  I ++CK                     + VTYST+I GLC +  + +A  LF+
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM 250

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM-DQG-----VQPSVVTFNVIMD 285
            M+     PD + Y +L+ GLC   + N A +L  EM+ D G      +P+++++++I+D
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID 310

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LCK+R+ DEA  L   M  +G+ P+  +Y TL+ GFCL GK  +A+ LF  M  +G + 
Sbjct: 311 GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 370

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D  + ++LI+  CK  +V EA  L   ++ +G  P VVT  TL  GL   H++  A +LF
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF 430

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI------LKCELDIQAYNCLI 459
            +MQ+ G   +  T  T + GLC++G I  A+EL + +        + C+ +  +Y+ +I
Sbjct: 431 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 490

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DGLCK GR   A ELF  +    ++P+V++Y  +I G C  G+   A+ LF +M +    
Sbjct: 491 DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 550

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PDV TF +LI    +  +  + NELL  M ++  +P+    + +V  L  N+   ++   
Sbjct: 551 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 610

Query: 580 FLVQERQG 587
           F+  ++ G
Sbjct: 611 FMKMQKLG 618



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 159/470 (33%), Positives = 243/470 (51%), Gaps = 26/470 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S++I++  L K++  D        + A G+ P++ +Y  LI+ FC  G+       
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L     P+  T + LI  L  + +++EA  L   +   GC P+V+T  TL+ GLC 
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-- 236
                 A  LF +M        + C PN VT +T++ GLC+ G +  A  L   M  +  
Sbjct: 420 KHRISKATQLFLKMQK------LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473

Query: 237 ----NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
               N  P+ ++Y+ +I GLC     +EA+ LF EM   GV P V+++  ++   C++ K
Sbjct: 474 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 533

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             +A  L + MV  GV+P+  T++ L+D  C  GK+  A EL   M   GC  + V+Y  
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 593

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD- 411
           L+ G C N  + EA  L+ +M   G  P VVTY TL  GL +   ++ AL+L  +M  D 
Sbjct: 594 LVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDT 653

Query: 412 -----GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
                    D  +Y+  IDGLCK+G   EA ELF+ ++ L    ++ +Y  LI G C+SG
Sbjct: 654 GQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSG 713

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
           +L+ A  LF  +    +  N VTY++MI G C +GQ+DKA  LF  ME N
Sbjct: 714 KLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/526 (30%), Positives = 268/526 (50%), Gaps = 33/526 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL-------NATGLF-----PN 95
           +EA  +F  M ++   P  ++ +  L+  L +  + +T L       N TG +     P 
Sbjct: 243 SEATRLFMSMQKLGCRPDAIA-YGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L +Y+I+I+  CK  R       F  +      P+  ++ +LI G     +  +A  LF 
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++   G +P+V T + LI+ LC+ G  + A  L E +          C P+ VT +T++ 
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG------CIPDVVTCTTLVK 415

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---- 271
           GLC +  + KA  LFL+M+     P+VVT  +L+ GLC + +   A  L   M+      
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 475

Query: 272 --GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
               +P+ +++++I+D LCK  + DEA  L   M   GV P+  +Y +L+ GFC  GK  
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A+ LF  M  +G + D  ++++LI+  CK  +V EA  L   M+ +G  P  VTY TL 
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    ++  A +LF +MQ+ G   D  TY T + GLC+ G I  A+EL + +     +
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 450 L------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+ +Y+ +IDGLCK GR   A ELF  +    ++PNV++Y  +I G C  G++
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           + A+ LF +M +     + +T+ ++IHGF +  +  K   L  KM+
Sbjct: 716 EDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 189/385 (49%), Gaps = 82/385 (21%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+  G+QP V T  V++D  CK  K+ EA+ LL++MVQRG   +  TY+TL+ G C+  +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 328 INRAEELFGSMESMGCKHDD---------------------------------------- 347
           I+ A +LF SM+ +GC+ D                                         
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 348 -VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            VSY+I+I+G CK++  +EA  L++EM ++G+ P V++Y +L  G     + E A  LF+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           EM   G+ +D  T +  ID LCK G +IEA EL   +    C LDI  Y+ LI GLC   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 467 RLKFAWELFCSL----------PHGVLV-------------------------------P 485
           R+  A  LF S+           +G L+                               P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            +++Y+I+I GLC D + D+AR+LF +M+     PDVI++  LIHGF    +  K   L 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKN 570
           ++M +  + PD +  S+++D+L K 
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKK 385


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 180/439 (41%), Positives = 266/439 (60%), Gaps = 13/439 (2%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTY 99
           T ++A   F+ ML MHP PP    F  LL S+AK KHY T      ++++ G+ P++YT 
Sbjct: 92  TLDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           NILIN FC + R+   F    ++L+    P+  TFN+LI+GL  E +I EA  LF K   
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G +P+V+TY TL+NGLC+ G+T  A+ L   M   N      C+PN + Y+TIID LCK
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCK 264

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +  V +A  LF +M  + I+PD+ TYNSLIH LC+  +W     L  EM++  + P+VV 
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F+ ++D LCK   +  A  ++D+M++RGV P+  TY  LMDG CL  +++ A ++F +M 
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC  +  SYNILINGYC+ + +++A+ L  +M  +G+    VTYNTL  GL  + +++
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           HA+ LF EM   G   D  TY   +D LCKN ++ EA+ L + +     + DI  YN  I
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504

Query: 460 DGLCKSGRLKFAWELFCSL 478
           DG+C++G L+ A +LF +L
Sbjct: 505 DGMCRAGELEAARDLFSNL 523



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 217/432 (50%), Gaps = 41/432 (9%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P+   F  L+  +          +L T++ +FG  P+V T N LIN  C
Sbjct: 99  SFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFC 158

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  A ++  ++      + + C+P+  T++T+I GLC EG + +A  LF +   E 
Sbjct: 159 HLRRLGYAFSVLAKL------LKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDVVTY +L++GLC   + + A RL   M+ +  +P+V+ +N I+D LCK+R++ EA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 298 RLLDLMVQRGVRPNACTYNTLM-----------------------------------DGF 322
            L   M+ +G+ P+  TYN+L+                                   D  
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G I  A ++   M   G + D V+Y  L++G+C   E++EA+ ++  MV KG  P V
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            +YN L  G  +I +++ A+ L ++M   G+ ADT TY T I GLC  G +  A+ LF  
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       D+  Y  L+D LCK+  L  A  L  ++    L  +++ YNI I G+C  G+
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 503 MDKARDLFLDME 514
           ++ ARDLF ++ 
Sbjct: 513 LEAARDLFSNLS 524



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 186/367 (50%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+TV ++ ++  + K        +L  QM    I PDV T N LI+  CH      A  +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP   TFN ++  LC   K+ EA  L D  +  G +P+  TY TLM+G C 
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G  + A  L  SM    C+ + ++YN +I+  CK+++V EA +L+ EM++KGI P + T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L   L  + + +H   L +EM    +  +   ++T +D LCK G I  A ++   + 
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               E D+  Y  L+DG C    +  A ++F ++ H   VPNV +YNI+I G C   +MD
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KA  L   M       D +T++ LIHG   +        L H+M     +PD     I++
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469

Query: 565 DLLVKNE 571
           D L KN 
Sbjct: 470 DYLCKNH 476



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 208/417 (49%), Gaps = 6/417 (1%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A + F ++      P+ + +  L+  + +  H    L+L  +M       G+   P+  
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 148

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T + +I+  C    +  A ++  ++      PD  T+N+LI GLC      EA  LF + 
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + +G QP VVT+  +M+ LCK      A RLL  MVQ+  RPN   YNT++D  C   ++
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  LF  M + G   D  +YN LI+  C   E +   +L  EMV+  I P VV ++T+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +   +  A  + D M + GV  D  TYT  +DG C    + EAV++F T+    C
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             ++++YN LI+G C+  R+  A  L   +    L+ + VTYN +I GLC+ G++  A  
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           LF +M  +   PD++T+ +L+    + +  ++   LL  ++   +  D  + +I +D
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 505



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ AL  F+ M        T  +T  +  + K  +    + L   +       D+   N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+  C   RL +A+ +   L      P+  T+N +I+GLC +G++ +A  LF       
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             PDV+T+  L++G  ++   S    LL  M +K   P+    + ++D L K+ 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDR 266


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 194/573 (33%), Positives = 309/573 (53%), Gaps = 54/573 (9%)

Query: 35  LTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLN 88
           L  R G   +    +A  +F  MLR  P P  V  FN L+ ++ + +  D       ++ 
Sbjct: 50  LKLRSGSYEIKGLEDAIDLFSDMLRSRPLPS-VIDFNKLMGAVVRMERPDLVISLYQKME 108

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-------SCFT------------- 128
              +  ++Y++ ILI CFC   ++      FG++ +         FT             
Sbjct: 109 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVS 168

Query: 129 -----------PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
                      P+  TF +L+ GL  E R++EA AL  ++   G +P+ ITY T ++G+C
Sbjct: 169 EALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC 228

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T+ ALNL  +M     EI  + KPN V YS IIDGLCK+G    +  LF++M+D+ 
Sbjct: 229 KMGDTVSALNLLRKME----EISHI-KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P++VTYN +I G C +  W+ A+RL  EM+++ + P+VVT+N +++   K  K  EA+
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L D M+ RG+ PN  TYN+++DGFC   +++ AE++F  M + GC  D  ++  LI+GY
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C  K +++ + L  EM  +G+    VTYNTL  G   +  +  AL L  +M   GV  D 
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSG 466
            T  T +DGLC NG + +A+E+F+ ++  K +L           D+  YN LI GL   G
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +   A EL+  +PH  +VP+ +TY+ MI GLC   ++D+A  +F+ M   + +P+V+TF+
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            LI+G+ +        EL  +M  + ++ DA I
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 265/524 (50%), Gaps = 37/524 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F  + R     P V +F  L+  L +            R+   GL P+  TY  
Sbjct: 168 SEALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 102 LINCFCKIGRVSLGFIAFGRILR-----SCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            ++  CK+G      ++   +LR     S   PN   ++++I GL  + R  ++  LF +
Sbjct: 223 FVDGMCKMGDT----VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++  G  PN++TYN +I G C +G    A  L +EM            PN VTY+ +I+ 
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK------ISPNVVTYNALINA 332

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
             KEG   +A  L+ +M    I P+ +TYNS+I G C  +  + A+ +F  M  +G  P 
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V TF  ++D  C  +++D+   LL  M +RG+  N  TYNTL+ GFCL+G +N A +L  
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-----------GIKPTVVTY 385
            M S G   D V+ N L++G C N ++++AL +++ M              G++P V+TY
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  GL    +   A +L++EM   G+  DT TY++ IDGLCK   + EA ++F ++  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++  +N LI+G CK+GR+    ELFC +    +V + + Y  +I G    G ++ 
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           A D+F +M  +   PD IT   ++ GF    E  +   +L  ++
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 202/433 (46%), Gaps = 58/433 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++  L K+ +H D+      +   G+FPN+ TYN +I  FC  GR S     
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +PN  T+N+LI     E +  EAA L+ ++   G  PN ITYN++I+G C+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C P+  T++T+IDG C    +D    L  +M    +
Sbjct: 371 QDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
             + VTYN+LIHG C   D N A  L  +M+  GV P +VT N ++D LC N        
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484

Query: 291 -------RKMD-------------------------------EASRLLDLMVQRGVRPNA 312
                   KMD                               EA  L + M  RG+ P+ 
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++N LINGYCK   V++ L L+ E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    + Y TL  G  ++  +  AL +F EM   GV  DT T    + G      
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664

Query: 433 IIEAVELFRTLRI 445
           +  AV +   L++
Sbjct: 665 LERAVAMLEDLQM 677



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 214/434 (49%), Gaps = 17/434 (3%)

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           IKGL       +A  LF+ +      P+VI +N L+  + R     + ++L+++M     
Sbjct: 59  IKGLE------DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ- 111

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                 + +  +++ +I   C    +  A + F ++    ++PDVVT+ +L+HGLC  + 
Sbjct: 112 -----IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
            +EA  LF     Q  +P V+TF  +M+ LC+  ++ EA  LLD MV+ G++P+  TY T
Sbjct: 167 VSEALDLF----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 318 LMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            +DG C MG    A  L   ME +   K + V Y+ +I+G CK+    ++ +L+ EM  K
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           GI P +VTYN +  G     +   A +L  EM    ++ +  TY   I+   K G   EA
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL+  +       +   YN +IDG CK  RL  A ++F  +      P+V T+  +I G
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C   ++D   +L  +M       + +T++ LIHGF  + + +   +L  +M    V PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 557 ASIVSIVVDLLVKN 570
               + ++D L  N
Sbjct: 463 IVTCNTLLDGLCDN 476



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 166/313 (53%), Gaps = 5/313 (1%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +A  LF +M+     PSV+ FN +M  + +  + D    L   M ++ +R +  ++  L+
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
             FC   K+  A   FG +  +G   D V++  L++G C +  V EAL L+ ++     +
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----R 179

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V+T+ TL  GL    +V  A+ L D M  +G+  D  TY TF+DG+CK G  + A+ L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 440 FRTLR-ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
            R +  I   + ++  Y+ +IDGLCK GR   +  LF  +    + PN+VTYN MI G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G+   A+ L  +M E   +P+V+T++ LI+ F++  +  +  EL  +M  + ++P+  
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 559 IVSIVVDLLVKNE 571
             + ++D   K +
Sbjct: 360 TYNSMIDGFCKQD 372



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 5/236 (2%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L +G  + K +E+A+ L+ +M+     P+V+ +N L   +  + + +  + L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D  ++T  I   C    +  A+  F  L  L    D+  +  L+ GLC   R+  A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF    H +  P+V+T+  ++ GLC +G++ +A  L   M EN   PD IT+   + G 
Sbjct: 172 DLF----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 533 IRINEPSKVNELLHKMKE-KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            ++ +      LL KM+E   + P+  I S ++D L K+     S   F+  + +G
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 192/513 (37%), Positives = 289/513 (56%), Gaps = 13/513 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F++M  +HP+P     FN +L SL   K Y T      ++  + + P+ +T NI
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFH-FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +INCFC  G+V L F    +IL+  + PN  T N+L+KGL  E ++ EA     K+ A G
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              + I+Y  LING+C+ G T  A+ L   +   +       +PN V YS IID LCK+ 
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWS------IRPNVVIYSMIIDRLCKDT 212

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A  L+ +M  + I+PDVVTY+ L+ G C     N A  L  EM+ + + P + T+ 
Sbjct: 213 LVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYT 272

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D LCK  K+ EA  +L +MV+  V  +   Y+TLMDG+CL+ ++N A+ +F +M  M
Sbjct: 273 ILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQM 332

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D   Y+I+ING CK K V+EAL+L+ E+  K + P  VTY +L   L +  ++ + 
Sbjct: 333 GVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYV 392

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LFDEM   G   D  TY   ID LCKNG++  A+ LF  ++      ++  +  L+DG
Sbjct: 393 WDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDG 452

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LCK GRLK A E F  L       NV TY +MI GLC +G +D+A  L   ME+N    D
Sbjct: 453 LCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISD 512

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            +TF+++I  F   +E  K  +L+ +M  + ++
Sbjct: 513 AVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 235/442 (53%), Gaps = 6/442 (1%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           TP+   FN ++  L    R   A +L+ +++    EP+  T N +IN  C  G  ++A +
Sbjct: 55  TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
              ++     ++G   +PNT+T +T++ GLC EG V +A     ++  +      ++Y  
Sbjct: 115 GVSKIL----KLGY--QPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGI 168

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI+G+C   +   A RL   +    ++P+VV +++I+D LCK+  +DEA  L   MV +G
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKG 228

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + P+  TY+ L+ GFC++G++NRA +L   M       D  +Y IL++  CK  +V+EA 
Sbjct: 229 ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAE 288

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           ++   MV   +   VV Y+TL  G   +++V +A ++F  M + GV  D   Y+  I+GL
Sbjct: 289 NVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGL 348

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK   + EA+ LF  +       D   Y  LID LCKSGR+ + W+LF  +      P+V
Sbjct: 349 CKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDV 408

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           +TYN +I  LC +G +D+A  LF  M++ A  P+V TF +L+ G  ++       E    
Sbjct: 409 ITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQD 468

Query: 548 MKEKKVMPDASIVSIVVDLLVK 569
           +  K    +    +++++ L K
Sbjct: 469 LLTKGYCLNVRTYTVMINGLCK 490



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 200/397 (50%), Gaps = 2/397 (0%)

Query: 176 LCRTGHTMIAL--NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           LC   H++  L  N  + ++  N    V   P+T  ++ I+  L        A +L+ QM
Sbjct: 25  LCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQM 84

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           +   + PD  T N +I+  CH      A     +++  G QP+ +T N +M  LC   K+
Sbjct: 85  ELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKV 144

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA R  D ++ +G R +  +Y  L++G C +G+   A  L   +E    + + V Y+++
Sbjct: 145 KEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMI 204

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+  CK+  V+EA  LY EMV KGI P VVTY+ L  G   + Q+  A+ L +EM  + +
Sbjct: 205 IDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENI 264

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  TYT  +D LCK G + EA  +   +      LD+  Y+ L+DG C    +  A  
Sbjct: 265 NPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKR 324

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           +F ++    + P+V  Y+IMI GLC   ++D+A +LF ++ +    PD +T+  LI    
Sbjct: 325 VFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLC 384

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +    S V +L  +M ++   PD    + ++D L KN
Sbjct: 385 KSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 79/177 (44%)

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
           H  + A+  F+ M        T  +   +  L        A+ L++ + + + E D    
Sbjct: 37  HNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTL 96

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +I+  C  G++  A+     +      PN +T N +++GLC +G++ +A      +  
Sbjct: 97  NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
                  I++ +LI+G  +I E      LL +++   + P+  I S+++D L K+ +
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTL 213


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 200/554 (36%), Positives = 306/554 (55%), Gaps = 17/554 (3%)

Query: 13  FASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNI 72
           F  +P   F   F S +  +  L   + +      N     F+ +L      PP+  FN 
Sbjct: 21  FQQSPNPNFIGLFPSSISLYSQLHHHQDE-----ENNLISSFNSLLHHKNPTPPIIQFNK 75

Query: 73  LLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           +L+SL K KH+ T L+        G+  + +T+NILINCF ++G  SL F  FG+IL+  
Sbjct: 76  ILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKG 135

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F PNA TFN+LIKGL  +  I +A     K+ A G   + ++Y TLINGLC+ G    AL
Sbjct: 136 FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 195

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L + +       G + +PN V Y+ IID +CK   V+ A  L+ QM  + I+PD  T N
Sbjct: 196 QLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCN 249

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           SLI+G C      EA  L  +M+ + + P + TF++++D  CK  K+ EA  +L + +++
Sbjct: 250 SLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK 309

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            +  +  TYN+LMDG+CL+ +IN+A+++F SM S G   +  SY  +ING CK K V+EA
Sbjct: 310 DIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEA 369

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           ++L+ EM  + I P VVTYN+L  GL ++ ++   LKL DEM   G   +  TY + +D 
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDA 429

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCKN ++ +A+ L   L+      D+  Y  LI GLC+SG+L+ A ++F  L       +
Sbjct: 430 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLD 489

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V TY +MIQG C  G  D A  L   ME+N   P+  T++++I      +E     +LL 
Sbjct: 490 VYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLR 549

Query: 547 KMKEKKVMPDASIV 560
           +M  + ++ + S +
Sbjct: 550 EMIARGLLDEKSYI 563



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 193/383 (50%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + ++ I+  L K      A +L  QM+   I  D  T+N LI+        + +  +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +++ +G  P+ +TFN ++  LC    + +A    D +V +G   +  +Y TL++G C 
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+I  A +L   ++    + + V YN++I+  CK K V +A  LY +MV+K I P   T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            N+L  G   + Q++ A+ L  +M  + +     T++  +D  CK G + EA  +     
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                LD+  YN L+DG C    +  A ++F S+    ++ NV +Y  MI GLC    +D
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A +LF +M      P+V+T++ LI G  ++ + S V +L+ +M ++   P+    + ++
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
           D L KN    K++      + QG
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQG 450



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 207/401 (51%), Gaps = 6/401 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P +I +N +++ L +  H   AL+L ++M       G+V   +  T++ +I+   + G  
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELN----GIV--SDFFTFNILINCFSQLGLN 121

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             + ++F ++  +  +P+ +T+N+LI GLC     ++A     +++ QG     V++  +
Sbjct: 122 SLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTL 181

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++ LCK  ++  A +LL  +  + V+PNA  YN ++D  C    +N A +L+  M +   
Sbjct: 182 INGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRI 241

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             DD + N LI G+C   +++EA+ L  +M+ + I P + T++ L     +  +V+ A  
Sbjct: 242 SPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKM 301

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +     +  +  D  TY + +DG C    I +A ++F ++       ++Q+Y  +I+GLC
Sbjct: 302 MLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLC 361

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K   +  A  LF  +    ++PNVVTYN +I GL   G++     L  +M +    P++I
Sbjct: 362 KIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNII 421

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           T++ ++    + +   K   LL  +K++ + PD    ++++
Sbjct: 422 TYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLI 462


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  348 bits (893), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 194/573 (33%), Positives = 309/573 (53%), Gaps = 54/573 (9%)

Query: 35  LTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLN 88
           L  R G   +    +A  +F  MLR  P P  V  FN L+ ++ + +  D       ++ 
Sbjct: 50  LKLRSGSYEIKGLEDAIDLFSDMLRSRPLPS-VIDFNKLMGAVVRMERPDLVISLYQKME 108

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-------SCFT------------- 128
              +  ++Y++ ILI CFC   ++      FG++ +         FT             
Sbjct: 109 RKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVS 168

Query: 129 -----------PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
                      P+  TF +L+ GL  E R++EA AL  ++   G +P+ ITY T ++G+C
Sbjct: 169 EALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC 228

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T+ ALNL  +M     EI  + KPN V YS IIDGLCK+G    +  LF++M+D+ 
Sbjct: 229 KMGDTVSALNLLRKME----EISHI-KPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P++VTYN +I G C +  W+ A+RL  EM+++ + P+VVT+N +++   K  K  EA+
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L D M+ RG+ PN  TYN+++DGFC   +++ AE++F  M + GC  D  ++  LI+GY
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C  K +++ + L  EM  +G+    VTYNTL  G   +  +  AL L  +M   GV  D 
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSG 466
            T  T +DGLC NG + +A+E+F+ ++  K +L           D+  YN LI GL   G
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +   A EL+  +PH  +VP+ +TY+ MI GLC   ++D+A  +F+ M   + +P+V+TF+
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            LI+G+ +        EL  +M  + ++ DA I
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAII 616



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 267/528 (50%), Gaps = 37/528 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F  + R     P V +F  L+  L +            R+   GL P+  TY  
Sbjct: 168 SEALDLFHQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 102 LINCFCKIGRVSLGFIAFGRILR-----SCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            ++  CK+G      ++   +LR     S   PN   ++++I GL  + R  ++  LF +
Sbjct: 223 FVDGMCKMGDT----VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++  G  PN++TYN +I G C +G    A  L +EM            PN VTY+ +I+ 
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK------ISPNVVTYNALINA 332

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
             KEG   +A  L+ +M    I P+ +TYNS+I G C  +  + A+ +F  M  +G  P 
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V TF  ++D  C  +++D+   LL  M +RG+  N  TYNTL+ GFCL+G +N A +L  
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-----------GIKPTVVTY 385
            M S G   D V+ N L++G C N ++++AL +++ M              G++P V+TY
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  GL    +   A +L++EM   G+  DT TY++ IDGLCK   + EA ++F ++  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++  +N LI+G CK+GR+    ELFC +    +V + + Y  +I G    G ++ 
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           A D+F +M  +   PD IT   ++ GF    E  +   +L  ++  ++
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQL 680



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 203/437 (46%), Gaps = 58/437 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++  L K+ +H D+      +   G+FPN+ TYN +I  FC  GR S     
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +PN  T+N+LI     E +  EAA L+ ++   G  PN ITYN++I+G C+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C P+  T++T+IDG C    +D    L  +M    +
Sbjct: 371 QDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
             + VTYN+LIHG C   D N A  L  +M+  GV P +VT N ++D LC N        
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484

Query: 291 -------RKMD-------------------------------EASRLLDLMVQRGVRPNA 312
                   KMD                               EA  L + M  RG+ P+ 
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++N LINGYCK   V++ L L+ E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    + Y TL  G  ++  +  AL +F EM   GV  DT T    + G      
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664

Query: 433 IIEAVELFRTLRILKCE 449
           +  AV +   L+  + E
Sbjct: 665 LERAVAMLEDLQRYQLE 681



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 214/434 (49%), Gaps = 17/434 (3%)

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           IKGL       +A  LF+ +      P+VI +N L+  + R     + ++L+++M     
Sbjct: 59  IKGLE------DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ- 111

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                 + +  +++ +I   C    +  A + F ++    ++PDVVT+ +L+HGLC  + 
Sbjct: 112 -----IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
            +EA  LF     Q  +P V+TF  +M+ LC+  ++ EA  LLD MV+ G++P+  TY T
Sbjct: 167 VSEALDLF----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 318 LMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            +DG C MG    A  L   ME +   K + V Y+ +I+G CK+    ++ +L+ EM  K
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           GI P +VTYN +  G     +   A +L  EM    ++ +  TY   I+   K G   EA
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL+  +       +   YN +IDG CK  RL  A ++F  +      P+V T+  +I G
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C   ++D   +L  +M       + +T++ LIHGF  + + +   +L  +M    V PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 557 ASIVSIVVDLLVKN 570
               + ++D L  N
Sbjct: 463 IVTCNTLLDGLCDN 476



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 166/313 (53%), Gaps = 5/313 (1%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +A  LF +M+     PSV+ FN +M  + +  + D    L   M ++ +R +  ++  L+
Sbjct: 64  DAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 123

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
             FC   K+  A   FG +  +G   D V++  L++G C +  V EAL L+ ++     +
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----R 179

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V+T+ TL  GL    +V  A+ L D M  +G+  D  TY TF+DG+CK G  + A+ L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239

Query: 440 FRTLR-ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
            R +  I   + ++  Y+ +IDGLCK GR   +  LF  +    + PN+VTYN MI G C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G+   A+ L  +M E   +P+V+T++ LI+ F++  +  +  EL  +M  + ++P+  
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359

Query: 559 IVSIVVDLLVKNE 571
             + ++D   K +
Sbjct: 360 TYNSMIDGFCKQD 372



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 5/236 (2%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L +G  + K +E+A+ L+ +M+     P+V+ +N L   +  + + +  + L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D  ++T  I   C    +  A+  F  L  L    D+  +  L+ GLC   R+  A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF    H +  P+V+T+  ++ GLC +G++ +A  L   M EN   PD IT+   + G 
Sbjct: 172 DLF----HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 533 IRINEPSKVNELLHKMKE-KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            ++ +      LL KM+E   + P+  I S ++D L K+     S   F+  + +G
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 197/555 (35%), Positives = 299/555 (53%), Gaps = 21/555 (3%)

Query: 23  SNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH 82
           +N +  L   RDL + E          A   F  M+ M+P P     F  L   + K KH
Sbjct: 37  TNRAQFLDSMRDLKSEEA---------ALSFFHKMVVMNPLPRE-KDFTKLFGIIVKMKH 86

Query: 83  YDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           Y T ++      + G+ P++YT  I+INC C +     GF   G + +    P   TF +
Sbjct: 87  YATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFAT 146

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           LI GL AE  +  AA     L+  G + N  TY  +INGLC+ G T  A+   E++   N
Sbjct: 147 LINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRN 206

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            ++ VV     + YSTI+D LCK+G V +A  LF  M  + I PD+V YNSLIHGLC+  
Sbjct: 207 CDLDVV-----IAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFG 261

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
            W EA  L   MM +G+ P+V TFNV++D  CK+  +  A  ++  MV  GV P+  TYN
Sbjct: 262 RWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYN 321

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++ G CL+ ++  A ++F  M   G   + V+Y+ LI+G+CK K + +AL L  EMV+ 
Sbjct: 322 SVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNS 381

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+ P VVT++TL  G  +  + E A +LF  M       + +T    +DGL K  +  EA
Sbjct: 382 GLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEA 441

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           + LFR +  +  EL++  YN ++DG+C  G+L  A ELF  LP   +  +VV Y  MI+G
Sbjct: 442 ISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKG 501

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LC +G +D A +L + MEEN   P+  T+++ + G ++  + S+  + L  MK K +  D
Sbjct: 502 LCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSAD 561

Query: 557 ASIVSIVVDLLVKNE 571
           A+   +++     N+
Sbjct: 562 ATTTELLISYFSANK 576


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 191/558 (34%), Positives = 305/558 (54%), Gaps = 54/558 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +F YM+R  P P  V  F  LL  + + +  D       ++    +  N+Y++ I
Sbjct: 58  DDAIDLFGYMVRSRPLPC-VIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE----------------- 144
           LI CFC   ++      FG+I +  F P+  TF++L+ GL  E                 
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN 176

Query: 145 --------------SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
                          R++EA AL  ++   G +PN ITY T+++G+C+ G T+ ALNL  
Sbjct: 177 VIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 236

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
           +M     E+  + KPN V YS IIDGL K+G    A+ LF +M+++ I+P++ TYN +I+
Sbjct: 237 KME----EVSRI-KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G C +  W+EA+RL  EM ++ + P VVTF+V+++ L K  K  EA  L + M+ RG+ P
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  TYN+++DGF    +++ AE +F  M + GC  D ++++ILI+GYC  K V++ + L 
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EM  +G+    +TY TL  G  ++  +  AL L  EM   GV  +  T  T +DGLC N
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471

Query: 431 GYIIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           G + +A+E+F+ ++  K +L           D+Q YN LI GL   G+   A EL+  +P
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           H  LVP+ +TYN +I GLC   ++D+A  +F  M     +PDV+TF  LI+G+ ++    
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVG 591

Query: 540 KVNELLHKMKEKKVMPDA 557
              E+  +M  + ++ +A
Sbjct: 592 DGLEVFCEMGRRGIVANA 609



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 189/404 (46%), Gaps = 60/404 (14%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF----TPNAATFNSLIKG 140
           + +   G+ PNL+TYN +IN FC  GR S       R+LR  F    +P+  TF+ LI  
Sbjct: 272 SEMQEKGISPNLFTYNCMINGFCSSGRWS----EAQRLLREMFERKMSPDVVTFSVLINA 327

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L  E +  EA  L+ ++   G  PN ITYN++I+G  +      A  +F  MA       
Sbjct: 328 LVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG---- 383

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C P+ +T+S +IDG C    VD    L  +M    +  + +TY +LIHG C   + N 
Sbjct: 384 --CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNA 441

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKN---------------RKMD----------- 294
           A  L  EM+  GV P+VVT N ++D LC N                KMD           
Sbjct: 442 ALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVE 501

Query: 295 --------------------EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
                               EA  L + M  RG+ P+  TYN+++DG C   +++ A ++
Sbjct: 502 PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQM 561

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F SM S G   D V++  LINGYCK   V + L ++ EM  +GI    +TY TL  G  +
Sbjct: 562 FDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQ 621

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +  +  AL +F EM   GV  DT T    + GL     +  AV+
Sbjct: 622 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 191/356 (53%), Gaps = 23/356 (6%)

Query: 65  PPVSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +F++L+ +L K   +         +   G+ PN  TYN +I+ F K  R+      
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +     +P+  TF+ LI G     R+ +   L  ++   G   N ITY TLI+G C+
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-- 236
            G+   AL+L +EM +       VC PN VT +T++DGLC  G +  A  +F  M+    
Sbjct: 436 LGNLNAALDLLQEMISSG-----VC-PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 237 ---------NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
                    ++ PDV TYN LI GL +   ++EA+ L+ EM  +G+ P  +T+N ++D L
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK  ++DEA+++ D M  +G  P+  T+ TL++G+C +G++    E+F  M   G   + 
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           ++Y  LI+G+C+   +  AL +++EM+S G+ P  +T   +  GL+   +++ A++
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 217/450 (48%), Gaps = 29/450 (6%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG ++RS   P    F  L+  +    R     +L  K++      N+ ++  LI   C 
Sbjct: 64  FGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCS 123

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G    P+ VT+ST++ GLC E  V +A   F Q+     
Sbjct: 124 CSKLPFALSTFGKIT----KLGF--HPSLVTFSTLLHGLCVEDRVSEALHFFHQI----C 173

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
            P+V+ + +L++GLC      EA  L   M++ G+QP+ +T+  I+D +CK         
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 291 --RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             RKM+E SR         ++PN   Y+ ++DG    G+   A+ LF  M+  G   +  
Sbjct: 234 LLRKMEEVSR---------IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLF 284

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +ING+C +    EA  L REM  + + P VVT++ L   L +  +   A +L++EM
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEM 344

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  +T TY + IDG  K   +  A  +F  +    C  D+  ++ LIDG C + R+
Sbjct: 345 LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRV 404

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               +L   +    LV N +TY  +I G C  G ++ A DL  +M  +   P+V+T + L
Sbjct: 405 DDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTL 464

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + G     +     E+   M++ K+  DAS
Sbjct: 465 LDGLCNNGKLKDALEMFKVMQKSKMDLDAS 494



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 215/450 (47%), Gaps = 11/450 (2%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF  +      P VI +  L+  + R     + ++L  +M    
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
               + C  N  +++ +I   C    +  A + F ++     +P +VT+++L+HGLC  +
Sbjct: 107 ----IPC--NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVED 160

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA   F     Q  +P+V+ F  +M+ LC+  ++ EA  LLD MV+ G++PN  TY 
Sbjct: 161 RVSEALHFF----HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216

Query: 317 TLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           T++DG C MG    A  L   ME +   K + V Y+ +I+G  K+    +A +L+ EM  
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KGI P + TYN +  G     +   A +L  EM    ++ D  T++  I+ L K G   E
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A EL+  +       +   YN +IDG  K  RL  A  +F  +      P+V+T++I+I 
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C   ++D    L  +M       + IT+  LIHGF ++   +   +LL +M    V P
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCP 456

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           +    + ++D L  N     +L  F V ++
Sbjct: 457 NVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 58/297 (19%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKI 109
           Y++      P V +F+IL+      K  D        ++  GL  N  TY  LI+ FC++
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF--------- 160
           G ++        ++ S   PN  T N+L+ GL    ++ +A  +F  ++           
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496

Query: 161 --GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
               EP+V TYN LI GL   G    A  L+EEM +     G+V  P+T+TY+++IDGLC
Sbjct: 497 FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR----GLV--PDTITYNSVIDGLC 550

Query: 219 KEGFVDKAKALFLQMKDENINPDVVT---------------------------------- 244
           K+  +D+A  +F  M  +  +PDVVT                                  
Sbjct: 551 KQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAI 610

Query: 245 -YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            Y +LIHG C   + N A  +F EM+  GV P  +T   ++  L    ++  A + L
Sbjct: 611 TYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 191/507 (37%), Positives = 294/507 (57%), Gaps = 13/507 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           N+A   F+ MLRM P PPP+  F  +L SL K KHY        R+   G+  N  T NI
Sbjct: 31  NDAIDSFNRMLRMRP-PPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN +C + +++  F  F +IL+  + P+  T+ +LI+GL    ++ E+     +L + G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            + + ++Y TLINGLC+ G T  AL L  ++       G +C+P+ V Y+TIIDGLCK+ 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIE------GEICRPDVVMYNTIIDGLCKDK 203

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V  A  L+ +M ++ + P+VVTY SLI+G C     ++A  L  EM+ + V P+V TFN
Sbjct: 204 LVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFN 263

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D LCK  KM EA  L+ +M++ GV P+  TYN LMDG+ L+ +  +A+ +F  M  M
Sbjct: 264 TLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM 323

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  SY+++I+G  K K ++EA+ L+  M ++ + P VV Y++L  GL +  ++  A
Sbjct: 324 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 383

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           LK  DEM   G   +  TYT+ ID LCK+  + +A+ L + ++    + ++  YN L+DG
Sbjct: 384 LKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDG 443

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LCK GRL  A ++F  L       +VVTY+IMI GLC +   D+A  L   ME+    PD
Sbjct: 444 LCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPD 503

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKM 548
            I ++ +I+ F   +   K  +LL +M
Sbjct: 504 AIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 246/494 (49%), Gaps = 41/494 (8%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+LR    P    F  ++  L           LF +++  G + N IT N LIN  C
Sbjct: 36  SFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYC 95

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  A ++F ++     ++G   +P+ +TY+T+I GLC  G V ++     ++  + 
Sbjct: 96  HLRQINSAFSVFAKIL----KLGY--QPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I  D V+Y +LI+GLC       A RL  ++  +  +P VV +N I+D LCK++ + +A 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M ++ V PN  TY +L+ GFC++G++++A  L   M       +  ++N L++G 
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  ++ EA SL   M+ +G+ P V TYN L  G F + +   A  +F+ M + GV  D 
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDV 329

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y+  I GL K   + EA++LF  +R      D+ AY+ LIDGLCKSGR+  A +    
Sbjct: 330 HSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389

Query: 478 LPHGVLVPNVVTY-----------------------------------NIMIQGLCNDGQ 502
           +      PNV+TY                                   NI++ GLC DG+
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGR 449

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +  A+ +F D+       DV+T+ ++I+G  + +   +   LL KM++K  +PDA     
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYET 509

Query: 563 VVDLLVKNEISLKS 576
           +++   + +++ K+
Sbjct: 510 IINAFFEKDMNDKA 523



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 171/349 (48%), Gaps = 43/349 (12%)

Query: 65  PPVSSFNILLASLAKNK----HYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N ++  L K+K     +D    +    +FPN+ TY  LI  FC +G++   F  
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     PN  TFN+L+ GL  E ++ EA +L   +   G  P+V TYN L++G   
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 306

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCK---------------------------------P 205
                 A N+F  MA    ++GV C                                  P
Sbjct: 307 VKEAGKAKNVFNIMA----QMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIP 362

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + V YS++IDGLCK G ++ A     +M D    P+V+TY SLI  LC ++  ++A  L 
Sbjct: 363 DVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALL 422

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            ++ DQG+Q ++ T+N+++D LCK+ ++ +A ++   ++ +G   +  TY+ +++G C  
Sbjct: 423 KKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKE 482

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
              + A  L   ME  GC  D ++Y  +IN + +    ++A  L REM+
Sbjct: 483 SLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 160/311 (51%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           N+A   F  M+     P ++ F  I+  L K +       L   M   G++ N  T N L
Sbjct: 31  NDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNIL 90

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ +C + +IN A  +F  +  +G + D ++Y  LI G C N +V+E+L+ +  +VS+GI
Sbjct: 91  INSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGI 150

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           K   V+Y TL  GL +I Q   AL+L  +++ +    D   Y T IDGLCK+  + +A +
Sbjct: 151 KLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFD 210

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L+  +   +   ++  Y  LI G C  G+L  A+ L   +    + PNV T+N ++ GLC
Sbjct: 211 LYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLC 270

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G+M +A+ L   M +    PDV T++ L+ G+  + E  K   + + M +  V  D  
Sbjct: 271 KEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVH 330

Query: 559 IVSIVVDLLVK 569
             S+++  L K
Sbjct: 331 SYSVMISGLSK 341



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 2/262 (0%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +N A + F  M  M      + +  ++    K K     + L++ M   GI+   +T N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L      + Q+  A  +F ++ + G   D  TYTT I GLC NG + E++     L    
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            +LD  +Y  LI+GLCK G+   A  L   +   +  P+VV YN +I GLC D  +  A 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           DL+ +M E    P+V+T+  LI+GF  + +  K   LL++M  K V P+    + +VD L
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 568 VKNEI--SLKSLPSFLVQERQG 587
            K       KSL + +++E  G
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVG 291



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 118/224 (52%), Gaps = 13/224 (5%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCF 106
           +F+ M +M  +   V S++++++ L+K K  D  ++         + P++  Y+ LI+  
Sbjct: 316 VFNIMAQMGVTCD-VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGL 374

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK GR++        +      PN  T+ SLI  L    ++ +A AL  K+K  G + N+
Sbjct: 375 CKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANM 434

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            TYN L++GLC+ G    A  +F+++      + VV      TYS +I+GLCKE   D+A
Sbjct: 435 YTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVV------TYSIMINGLCKESLFDEA 488

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
             L  +M+D+   PD + Y ++I+     +  ++A++L  EM+D
Sbjct: 489 LTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/569 (34%), Positives = 315/569 (55%), Gaps = 28/569 (4%)

Query: 6   CCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPP 65
           C  RSF+ AS+     R N S  ++          D+ +   ++A  +F  M++  P P 
Sbjct: 29  CWERSFAGASS--DDCRENLSRKVLQ---------DLKL---DDAIGLFGDMVKSRPFPS 74

Query: 66  PVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
            V  F+ LL+++AK   +D       ++   G+  NLYTY+I IN FC+  ++SL     
Sbjct: 75  IVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           G++++  + P+  T NSL+ G    +RI EA AL  ++   G +P+ +T+ TL++GL + 
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A+ L E M          C+P+ VTY  +I+GLCK G  D A  L  +M+   I 
Sbjct: 194 NKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
            DVV YN++I GLC     ++A  LF +M  +G++P V T+N ++  LC   +  +ASRL
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYC 358
           L  M+++ + P+   +N L+D F   GK+  AE+L+  M +S  C  D V+YN LI G+C
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K K VEE + ++REM  +G+    VTY TL  G F+    ++A  +F +M  DGV  D  
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +DGLC NG +  A+ +F  ++    +LDI  Y  +I+ LCK+G+++  W+LFCSL
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + PNVVTY  M+ G C  G  ++A  LF++M+E+   P+  T++ LI   +R  + 
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +   EL+ +M+      DAS   +V ++L
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLVTNML 576



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 214/425 (50%), Gaps = 7/425 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ +A  LF  +      P+++ ++ L++ + +     + ++L E+M N    +G+    
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 108

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  TYS  I+  C+   +  A A+  +M      P +VT NSL++G CH N  +EA  L 
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G QP  VTF  ++  L ++ K  EA  L++ MV +G +P+  TY  +++G C  
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+ + A  L   ME    + D V YN +I+G CK K +++A  L+ +M +KGIKP V TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLR 444
           N L   L    +   A +L  +M    +  D   +   ID   K G ++EA +L+   ++
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  D+ AYN LI G CK  R++   E+F  +    LV N VTY  +I G       D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+ +F  M  +   PD++T+++L+ G            +   M+++ +  D    + ++
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468

Query: 565 DLLVK 569
           + L K
Sbjct: 469 EALCK 473



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 184/367 (50%), Gaps = 1/367 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V +S ++  + K    D   +L  QM++  I+ ++ TY+  I+  C  +  + A  +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +MM  G  PS+VT N +++  C   ++ EA  L+D MV+ G +P+  T+ TL+ G   
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K + A  L   M   GC+ D V+Y  +ING CK  E + AL+L  +M    I+  VV 
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNT+  GL +   ++ A  LF++M+  G+  D  TY   I  LC  G   +A  L   + 
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQM 503
                 D+  +N LID   K G+L  A +L+  +       P+VV YN +I+G C   ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           ++  ++F +M +     + +T+  LIHGF +  +      +  +M    V PD    +I+
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432

Query: 564 VDLLVKN 570
           +D L  N
Sbjct: 433 LDGLCNN 439



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 145/284 (51%)

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
           ++ ++ K+D+A  L   MV+    P+   ++ L+     M K +    L   M+++G  H
Sbjct: 49  KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 108

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +  +Y+I IN +C+  ++  AL++  +M+  G  P++VT N+L  G    +++  A+ L 
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D+M   G   DT T+TT + GL ++    EAV L   + +  C+ D+  Y  +I+GLCK 
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G    A  L   +  G +  +VV YN +I GLC    MD A DLF  ME     PDV T+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + LI         S  + LL  M EK + PD    + ++D  VK
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 36/263 (13%)

Query: 65  PPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P +  FN L+ +  K        K YD  + +   FP++  YN LI  FCK  RV  G  
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  + +     N  T+ +LI G         A  +F ++ + G  P+++TYN L++GLC
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437

Query: 178 RTGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTV 208
             G+   AL +FE M   + ++ +V                              KPN V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T++ G C++G  ++A ALF++MK++   P+  TYN+LI       D   +  L  EM
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557

Query: 269 MDQGVQPSVVTFNVIMDELCKNR 291
              G      TF ++ + L   R
Sbjct: 558 RSCGFAGDASTFGLVTNMLHDGR 580


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 191/504 (37%), Positives = 285/504 (56%), Gaps = 27/504 (5%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNK-HY------DTRLNATGLFPNLYTYNILINCFCKIG 110
           +R     P +  FN +L  L K K HY       T++ + G+ P+L+T +ILINC+C +G
Sbjct: 57  MRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLG 116

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           +++  F  F +IL+               GL    ++ EA      + A G   N +TY 
Sbjct: 117 QMTFAFSVFAKILKM--------------GLCLNGKVNEALLFHDHVLALGFHLNHVTYG 162

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            LINGLC+ G T  AL +  ++       G +   N V YSTIIDGLCK+  V  A  L+
Sbjct: 163 ILINGLCKMGQTRAALQVLRQIE------GKLVNTNVVMYSTIIDGLCKDKLVTDAYGLY 216

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M  + I P VVT++SLI+G C    + +A RLF EM+ + + P   TFN+++D LCK 
Sbjct: 217 SEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K+ EA  ++ +M++ GV P   TYNTLMDG+CL+ ++ +A+ +   +  M    +  SY
Sbjct: 277 GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSY 336

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           NI+ING+CK K V+EAL L+ EM  +GI P  VTYN+L  GL +  ++ +A +L DEM  
Sbjct: 337 NIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN 396

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           + + AD  TY + ID  CKN ++ +A+ L + ++    + ++  YN LIDGLCK G+LK 
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A ++F  L       N  TYNIMI GLC +G  D+A  L   ME+N   PD +T++ +I 
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQ 516

Query: 531 GFIRINEPSKVNELLHKMKEKKVM 554
                +E  K  +LL +M  K V+
Sbjct: 517 ALFHKDENEKAQKLLREMVIKGVV 540



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 247/486 (50%), Gaps = 19/486 (3%)

Query: 117 IAFGRILRSCFTPNAATFNSLIKGL-HAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           ++F R+ +   TP+   FN ++  L   ++      +L T++++ G +P++ T + LIN 
Sbjct: 52  LSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINC 111

Query: 176 LCRTGHTMIALNLFEEMANG----NGEI-----------GVVCKPNTVTYSTIIDGLCKE 220
            C  G    A ++F ++       NG++            +    N VTY  +I+GLCK 
Sbjct: 112 YCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKM 171

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G    A  +  Q++ + +N +VV Y+++I GLC      +A  L+ EM+ + + P+VVTF
Sbjct: 172 GQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTF 231

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++   C   K  +A RL + MV + + P+A T+N L+D  C  GKI  A+ +   M  
Sbjct: 232 SSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMK 291

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G +   V+YN L++GYC   EV +A  +   +    + P   +YN +  G  +I  V+ 
Sbjct: 292 EGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDE 351

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL LF EM   G+A    TY + IDGLCK G I  A EL   +       DI  YN LID
Sbjct: 352 ALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLID 411

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
             CK+  +  A  L   +    + PN+ TYNI+I GLC  GQ+  A+D+F D+       
Sbjct: 412 VFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNV 471

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV---KNEISLKSL 577
           +  T++++I+G  +     +   LL KM++  ++PDA     ++  L    +NE + K L
Sbjct: 472 NAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLL 531

Query: 578 PSFLVQ 583
              +++
Sbjct: 532 REMVIK 537



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 156/337 (46%), Gaps = 38/337 (11%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNIL 102
           +AF +F+ M+ M    P   +FNIL+ +L K        N        G+ P + TYN L
Sbjct: 246 DAFRLFNEMV-MKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTL 304

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ +C +  V         I R    PN+ ++N +I G      + EA  LF ++   G 
Sbjct: 305 MDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGI 364

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANG---------NGEIGVVCK--------- 204
            P+ +TYN+LI+GLC+ G    A  L +EM N          N  I V CK         
Sbjct: 365 APHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIA 424

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      PN  TY+ +IDGLCK G +  A+ +F  +  +  N +  TYN +I+GLC
Sbjct: 425 LVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLC 484

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
               ++EA+ L  +M D G+ P  VT+  I+  L    + ++A +LL  MV +GV   A 
Sbjct: 485 KEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAF 544

Query: 314 TYNTLMDGFCLMGKINRAEELFGSME--SMGCKHDDV 348
                + G  L   +N    LF ++E  S G +  D+
Sbjct: 545 EIRRTLVGRTLNLGMNLISLLFSALECFSFGEETKDI 581


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  345 bits (884), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 198/576 (34%), Positives = 303/576 (52%), Gaps = 20/576 (3%)

Query: 9   RSFSFASAPISAF--RSNFSSLLVHFRDLTTREGDI-----NVITPNEAFCIFDYMLRMH 61
           R F+ +S P       S+ SS    +  + T          NV + + A   +  M+ M 
Sbjct: 14  RYFALSSNPTHFLLHPSHSSSTFSTYASINTSRAQFLDSLRNVKSVDVALDFYHKMVTMK 73

Query: 62  PSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P P  V  FN+L   +AK KHY T       ++  G+ PN+ T+NI+INC C++     G
Sbjct: 74  PFPC-VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFG 132

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F   G + +    P+  TF +++ GL  E  + +A      LK  G E +  T   +ING
Sbjct: 133 FSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIING 192

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC+ GH+  AL+  ++M   N      C  +   Y+ ++DGLCK+G V +A  LF QM  
Sbjct: 193 LCKVGHSSAALSYLKKMEEQN------CNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTG 246

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + I PD+ TYN LIHGLC+ + W EA  L   MM +G+ P V TFNVI     K   +  
Sbjct: 247 KGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISR 306

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  +   M   G+  +  TY++++   C++ ++  A E+F  M   GC  + V+Y  LI+
Sbjct: 307 AKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIH 366

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+C+ K + +A+    EMV+ G+ P +VT+NTL  G  +  +   A +LF  M + G   
Sbjct: 367 GWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLP 426

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D +T    +DGL K  +  EA+ LFR L  +  +LDI  Y+ +++G+C SG+L  A ELF
Sbjct: 427 DLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELF 486

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             L    +  +VVTYNIMI GLC +G +D A DL + MEEN   PD  T+++ + G +R 
Sbjct: 487 SYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRR 546

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            E SK  + L  MK K    +A+   ++++    N+
Sbjct: 547 YEISKSTKYLMFMKGKGFRANATTTKLLINYFSANK 582



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 15/405 (3%)

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           H M+ +  F  + + N   G+V K     Y+T I             +L   M    + P
Sbjct: 67  HKMVTMKPFPCVKDFNLLFGIVAKMKH--YTTAI-------------SLIKHMSYIGVKP 111

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +V T+N +I+ LC  N       +   M   GV+PS+VTF  I++ LC    + +A R +
Sbjct: 112 NVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFV 171

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D +   G   +  T   +++G C +G  + A      ME   C  D  +YN +++G CK+
Sbjct: 172 DHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKD 231

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             V EA  L+ +M  KGI+P + TYN L  GL    + + A  L   M R G+  D +T+
Sbjct: 232 GMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 291

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
                   K G I  A  +F  +  +  E D+  Y+ +I   C   ++K A E+F  +  
Sbjct: 292 NVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIR 351

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
              +PN+VTY  +I G C    M+KA     +M  N   P+++T++ LI GF +  +P  
Sbjct: 352 KGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVA 411

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
             EL   M +   +PD    +I++D L K     +++  F   E+
Sbjct: 412 AKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEK 456



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 171/388 (44%), Gaps = 7/388 (1%)

Query: 209 TYSTI-------IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           TY++I       +D L     VD A   + +M      P V  +N L   +     +  A
Sbjct: 38  TYASINTSRAQFLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTA 97

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             L   M   GV+P+V T N++++ LC+         +L LM + GV P+  T+ T+++G
Sbjct: 98  ISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNG 157

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C+ G + +A      ++ MG + D  +   +ING CK      ALS  ++M  +     
Sbjct: 158 LCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLD 217

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V  YN +  GL +   V  A  LF +M   G+  D  TY   I GLC      EA  L  
Sbjct: 218 VTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLA 277

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +       D+Q +N +     K+G +  A  +F  + H  +  +VVTY+ +I   C   
Sbjct: 278 NMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLN 337

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           QM  A ++F  M      P+++T+  LIHG+  I   +K    L +M    + P+    +
Sbjct: 338 QMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWN 397

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQGEV 589
            ++    K    + +   F V  + G++
Sbjct: 398 TLIGGFCKAGKPVAAKELFFVMHKHGQL 425


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  344 bits (883), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 176/483 (36%), Positives = 278/483 (57%), Gaps = 16/483 (3%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L   GL P++ T+N L++  C   RVS     F ++  +   PN  TF +L+ GL  E 
Sbjct: 139 KLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREG 198

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           RI+EA AL  ++   G +P  ITY T+++G+C+ G T+ ALNL  +M   +  I     P
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-----P 253

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V YS IID LCK+G    A+ LF +M+++ I PD+ TYNS+I G C +  W++A++L 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM+++ + P VVT+N +++   K  K  EA  L D M+ RG+ PN  TY++++DGFC  
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  EM   G+     TY
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           NTL  G + +  +  AL L  EM   G+  D  T  T +DGLC NG + +A+E+F+ ++ 
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 446 LKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
            K +L           D+Q YN LI GL   G+   A EL+  +PH  +VP+ +TY+ MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLC   ++D+A  +F  M   + +P+V+TF  LI+G+ +        EL  +M  + ++
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 555 PDA 557
            +A
Sbjct: 614 ANA 616



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 203/433 (46%), Gaps = 58/433 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ SL K+ +H D     T +   G+FP+L+TYN +I  FC  GR S     
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +P+  T+N+LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C PN +T++T+IDG C    +D    L  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD---- 294
             D  TYN+LIHG     D N A  L  EM+  G+ P +VT + ++D LC N K+     
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 295 ------------------------------------------EASRLLDLMVQRGVRPNA 312
                                                     EA  L + M  RG+ P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    +TY TL  G  ++  +  AL +F EM   GV  DT T    + GL     
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 433 IIEAVELFRTLRI 445
           +  AV +   L++
Sbjct: 667 LKRAVAMLEKLQM 679



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 221/450 (49%), Gaps = 25/450 (5%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +LRS   P+   F  L+  +    R     +L+ K++      ++ ++  LI   C 
Sbjct: 67  FSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCS 126

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G+   P+ VT++T++ GLC E  V +A  LF QM +   
Sbjct: 127 CSKLPFALSTFGKLT----KLGL--HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
            P+VVT+ +L++GLC      EA  L   MM+ G+QP+ +T+  I+D +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 291 --RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             RKM+E S ++         PN   Y+ ++D  C  G+ + A+ LF  M+  G   D  
Sbjct: 241 LLRKMEEVSHII---------PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +I G+C +    +A  L +EM+ + I P VVTYN L     +  +   A +L+DEM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  +T TY++ IDG CK   +  A  +F  +    C  ++  +N LIDG C + R+
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               EL   +    LV +  TYN +I G    G ++ A DL  +M  +   PD++T D L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + G     +     E+   M++ K   DAS
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 222/451 (49%), Gaps = 7/451 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF+ +      P+V+ +  L+  + R     + ++L+++M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                  + +  +++ +I   C    +  A + F ++    ++PDVVT+N+L+HGLC  +
Sbjct: 110 ------IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVED 163

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA  LF +M +   +P+VVTF  +M+ LC+  ++ EA  LLD M++ G++P   TY 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 317 TLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           T++DG C  G    A  L   ME +     + V Y+ +I+  CK+    +A +L+ EM  
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KGI P + TYN++ +G     +   A +L  EM    ++ D  TY   I+   K G   E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A EL+  +       +   Y+ +IDG CK  RL  A  +F  +      PN++T+N +I 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C   ++D   +L  +M E     D  T++ LIHGF  + + +   +LL +M    + P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           D      ++D L  N     +L  F V ++ 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 188/558 (33%), Positives = 299/558 (53%), Gaps = 48/558 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +A  +F  MLR  P P  V  F  L+  + + +  D       ++    +  ++Y++NIL
Sbjct: 62  DAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I CFC   ++      FG+I +    P+  TF +L+ GL  E R+ EA   F ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
            PNV+T+ TL+NGLCR G  + A+ L + M     +         +  +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN V YS IID LCK+G    A+ LF +M+++ I PD+ TYNS+I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C +  W++A++L  EM+++ + P VVT+N +++   K  K  EA+ L D M+ RG+ PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 360

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN+++DGFC   +++ AE++F  M + GC  D  ++  LI+GYC  K +++ + L  E
Sbjct: 361 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 420

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +G+    VTYNTL  G   +  +  AL L  +M   GV  D  T  T +DGLC NG 
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 480

Query: 433 IIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +A+E+F+ ++  K +L           D+  YN LI GL   G+   A EL+  +PH 
Sbjct: 481 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 540

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +VP+ +TY+ MI GLC   ++D+A  +F+ M   + +P+V+TF+ LI+G+ +       
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 600

Query: 542 NELLHKMKEKKVMPDASI 559
            EL  +M  + ++ DA I
Sbjct: 601 LELFCEMGRRGIVADAII 618



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 270/565 (47%), Gaps = 82/565 (14%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + SFNIL+                 ++   GL P++ T+  L++  C   RVS     F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           ++  +   PN  TF +L+ GL  E RI+EA AL  ++   G +P  ITY T+++G+C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 181 HTMIALNLFEEMAN----------GNGEIGVVCK--------------------PNTVTY 210
            T+ ALNL  +M             +  I  +CK                    P+  TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +++I G C  G    A+ L  +M +  I+PDVVTYN+LI+       + EA  L+ EM+ 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP-------------------- 310
           +G+ P+ +T+N ++D  CK  ++D A  +  LM  +G  P                    
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 311 ---------------NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
                          N  TYNTL+ GFCL+G +N A +L   M S G   D V+ N L++
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 356 GYCKNKEVEEALSLYREMVSK-----------GIKPTVVTYNTLFLGLFEIHQVEHALKL 404
           G C N ++++AL +++ M              G++P V+TYN L  GL    +   A +L
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           ++EM   G+  DT TY++ IDGLCK   + EA ++F ++       ++  +N LI+G CK
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 593

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +GR+    ELFC +    +V + + Y  +I G    G ++ A D+F +M  +   PD IT
Sbjct: 594 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 653

Query: 525 FDMLIHGFIRINEPSKVNELLHKMK 549
              ++ GF    E  +   +L  ++
Sbjct: 654 IRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 204/433 (47%), Gaps = 58/433 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ SL K+ +H D     T +   G+FP+L+TYN +I  FC  GR S     
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +P+  T+N+LI     E +  EAA L+ ++   G  PN ITYN++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C P+  T++T+IDG C    +D    L  +M    +
Sbjct: 373 QDRLDAAEDMFYLMATKG------CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 426

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
             + VTYN+LIHG C   D N A  L  +M+  GV P +VT N ++D LC N        
Sbjct: 427 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486

Query: 291 -------RKMD-------------------------------EASRLLDLMVQRGVRPNA 312
                   KMD                               EA  L + M  RG+ P+ 
Sbjct: 487 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++N LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 606

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    + Y TL  G  ++  +  AL +F EM   GV  DT T    + G      
Sbjct: 607 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666

Query: 433 IIEAVELFRTLRI 445
           +  AV +   L++
Sbjct: 667 LERAVAMLEDLQM 679



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 217/461 (47%), Gaps = 48/461 (10%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF+ +      P+V+ +  L+  + R     + ++L+++M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 197 -------------------------GEIGVVCK----PNTVTYSTIIDGLCKEGFVDKAK 227
                                       G + K    P+ VT++T++ GLC E  V +A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
             F QM +    P+VVT+ +L++GLC      EA  L   MM+ G+QP+ +T+  I+D +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 288 CKN----------RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           CK           RKM+E S ++         PN   Y+ ++D  C  G+ + A+ LF  
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHII---------PNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+  G   D  +YN +I G+C +    +A  L +EM+ + I P VVTYN L     +  +
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
              A +L+DEM   G+  +T TY + IDG CK   +  A ++F  +    C  D+  +  
Sbjct: 341 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 400

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LIDG C + R+    EL   +P   LV N VTYN +I G C  G ++ A DL   M  + 
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             PD++T + L+ G     +     E+   M++ K+  DAS
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 162/325 (49%), Gaps = 1/325 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +R +  ++N L+  FC   K+  A   FG +  +G   D V++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
             + +M     +P VVT+ TL  GL    ++  A+ L D M  DG+     TY T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 428 CKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           CK G  + A+ L R +  +   + ++  Y+ +ID LCK GR   A  LF  +    + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           + TYN MI G C+ G+   A  L  +M E   +PDV+T++ LI+ F++  +  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNE 571
           +M  + ++P+    + ++D   K +
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQD 374


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 205/593 (34%), Positives = 306/593 (51%), Gaps = 51/593 (8%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK-----HYDTRLN 88
           +L  + G     + ++A   FDYM+R  P    V    ++   +  N+         ++ 
Sbjct: 74  ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME 133

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
              +  N+Y++NILI CFC   ++S     FG++ +  F P+  TFN+L+ GL  E RI 
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS 193

Query: 149 EAAA----------LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           EA A          LF ++   G  P VIT+NTLINGLC  G  + A  L  +M      
Sbjct: 194 EALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 253

Query: 199 IGVVC-----------------------------KPNTVTYSTIIDGLCKEGFVDKAKAL 229
           I VV                              KP+ V YS IID LCK+G    A+ L
Sbjct: 254 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 313

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           F +M ++ I P+V TYN +I G C    W++A+RL  +M+++ + P V+TFN ++    K
Sbjct: 314 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 373

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             K+ EA +L D M+ R + P+  TYN+++ GFC   + + A+ +F  M S     D V+
Sbjct: 374 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVT 429

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +N +I+ YC+ K V+E + L RE+  +G+     TYNTL  G  E+  +  A  LF EM 
Sbjct: 430 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 489

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             GV  DT T    + G C+N  + EA+ELF  +++ K +LD  AYN +I G+CK  ++ 
Sbjct: 490 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 549

Query: 470 FAWELFCSLP-HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            AW+LFCSLP HGV  P+V TYN+MI G C    +  A  LF  M++N   PD  T++ L
Sbjct: 550 EAWDLFCSLPIHGV-EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 608

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
           I G ++  E  K  EL+ +M+      DA  + +V DL+    +  KS    L
Sbjct: 609 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLD-KSFSDML 660



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 204/424 (48%), Gaps = 22/424 (5%)

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N +I    R     +A++L+ +M     EI  +   N  +++ +I   C    +  + + 
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKM-----EIRRI-PLNIYSFNILIKCFCDCHKLSFSLST 163

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEA----------KRLFIEMMDQGVQPSVVT 279
           F ++      PDVVT+N+L+HGLC  +  +EA            LF +M++ G+ P V+T
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVIT 223

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           FN +++ LC   ++ EA+ L++ MV +G+  +  TY T+++G C MG    A  L   ME
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
               K D V Y+ +I+  CK+    +A  L+ EM+ KGI P V TYN +  G     +  
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 343

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQAYNCL 458
            A +L  +M    +  D  T+   I    K G + EA +L   + + +C   D   YN +
Sbjct: 344 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-LHRCIFPDTVTYNSM 402

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G CK  R   A  +F  +      P+VVT+N +I   C   ++D+   L  ++     
Sbjct: 403 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 458

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
             +  T++ LIHGF  ++  +   +L  +M    V PD    +I++    +NE   ++L 
Sbjct: 459 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 518

Query: 579 SFLV 582
            F V
Sbjct: 519 LFEV 522


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 187/556 (33%), Positives = 297/556 (53%), Gaps = 48/556 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +A  +F  MLR  P P  V  F  L+  + + +  D       ++    +  ++Y++ IL
Sbjct: 62  DAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I CFC   ++      FG+I +    P+  TFN+L+ GL  E R+ EA  LF ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEM---------------ANGNGEIGVVCK--- 204
            PNV+T+ TL+NGLCR G  + A+ L + M                +G  +IG       
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN V YS IID LCK+G    A+ LF +M+++ I PD+ TYNS+I G 
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C +  W++A++L  EM+++ + P VVT+N +++   K  K  EA  L D M+ RG+ PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DGFC   +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G+     TYNTL  G + +  +  AL L  EM   G+  D  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 433 IIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +A+E+F+ ++  K +L           D+Q YN LI GL   G+   A EL+  +PH 
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +VP+ +TY+ MI GLC   ++D+A  +F  M   + +P+V+TF  LI+G+ +       
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 542 NELLHKMKEKKVMPDA 557
            EL  +M  + ++ +A
Sbjct: 601 LELFCEMGRRGIVANA 616



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 203/433 (46%), Gaps = 58/433 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ SL K+ +H D     T +   G+FP+L+TYN +I  FC  GR S     
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +P+  T+N+LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C PN +T++T+IDG C    +D    L  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD---- 294
             D  TYN+LIHG     D N A  L  EM+  G+ P +VT + ++D LC N K+     
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 295 ------------------------------------------EASRLLDLMVQRGVRPNA 312
                                                     EA  L + M  RG+ P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    +TY TL  G  ++  +  AL +F EM   GV  DT T    + GL     
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 433 IIEAVELFRTLRI 445
           +  AV +   L++
Sbjct: 667 LKRAVAMLEKLQM 679



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 221/450 (49%), Gaps = 25/450 (5%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +LRS   P+   F  L+  +    R     +L+ K++      ++ ++  LI   C 
Sbjct: 67  FSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCS 126

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G+   P+ VT++T++ GLC E  V +A  LF QM +   
Sbjct: 127 CSKLPFALSTFGKIT----KLGL--HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
            P+VVT+ +L++GLC      EA  L   MM+ G+QP+ +T+  I+D +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240

Query: 291 --RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             RKM+E S ++         PN   Y+ ++D  C  G+ + A+ LF  M+  G   D  
Sbjct: 241 LLRKMEEISHII---------PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +I G+C +    +A  L +EM+ + I P VVTYN L     +  +   A +L+DEM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  +T TY++ IDG CK   +  A  +F  +    C  ++  +N LIDG C + R+
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               EL   +    LV +  TYN +I G    G ++ A DL  +M  +   PD++T D L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + G     +     E+   M++ K   DAS
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 224/451 (49%), Gaps = 7/451 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF+ +      P+V+ +  L+  + R     + ++L+++M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                  + +  +++ +I   C    +  A + F ++    ++PDVVT+N+L+HGLC  +
Sbjct: 110 ------IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVED 163

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA  LF +M +   +P+VVTF  +M+ LC+  ++ EA  LLD M++ G++P   TY 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 317 TLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           T++DG C +G    A +L   ME +     + V Y+ +I+  CK+    +A +L+ EM  
Sbjct: 224 TIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KGI P + TYN++ +G     +   A +L  EM    ++ D  TY   I+   K G   E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A EL+  +       +   Y+ +IDG CK  RL  A  +F  +      PN++T+N +I 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C   ++D   +L  +M E     D  T++ LIHGF  + + +   +LL +M    + P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           D      ++D L  N     +L  F V ++ 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 186/556 (33%), Positives = 297/556 (53%), Gaps = 48/556 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +A  +F  MLR  P P  V  F  L+  + + +  D       ++    +  ++Y++ IL
Sbjct: 62  DAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I CFC   ++      FG+I +    P+  TFN+L+ GL  E R+ EA  LF ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
            PNV+T+ TL+NGLCR G  + A+ L + M     +         +  +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN V YS IID LCK+G    A+ LF +M+++ I PD+ TYNS+I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C +  W++A++L  EM+++ + P VVT+N +++   K  K  EA  L D M+ RG+ PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DGFC   +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G+     TYNTL  G + +  +  AL L  EM   G+  D  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 433 IIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +A+E+F+ ++  K +L           D+Q YN LI GL   G+   A EL+  +PH 
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +VP+ +TY+ MI GLC   ++D+A  +F  M   + +P+V+TF  LI+G+ +       
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 542 NELLHKMKEKKVMPDA 557
            EL  +M  + ++ +A
Sbjct: 601 LELFCEMGRRGIVANA 616



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 203/433 (46%), Gaps = 58/433 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ SL K+ +H D     T +   G+FP+L+TYN +I  FC  GR S     
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +P+  T+N+LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C PN +T++T+IDG C    +D    L  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD---- 294
             D  TYN+LIHG     D N A  L  EM+  G+ P +VT + ++D LC N K+     
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 295 ------------------------------------------EASRLLDLMVQRGVRPNA 312
                                                     EA  L + M  RG+ P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    +TY TL  G  ++  +  AL +F EM   GV  DT T    + GL     
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 433 IIEAVELFRTLRI 445
           +  AV +   L++
Sbjct: 667 LKRAVAMLEKLQM 679



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 221/450 (49%), Gaps = 25/450 (5%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +LRS   P+   F  L+  +    R     +L+ K++      ++ ++  LI   C 
Sbjct: 67  FSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCS 126

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G+   P+ VT++T++ GLC E  V +A  LF QM +   
Sbjct: 127 CSKLPFALSTFGKIT----KLGL--HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
            P+VVT+ +L++GLC      EA  L   MM+ G+QP+ +T+  I+D +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 291 --RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             RKM+E S ++         PN   Y+ ++D  C  G+ + A+ LF  M+  G   D  
Sbjct: 241 LLRKMEEVSHII---------PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +I G+C +    +A  L +EM+ + I P VVTYN L     +  +   A +L+DEM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  +T TY++ IDG CK   +  A  +F  +    C  ++  +N LIDG C + R+
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               EL   +    LV +  TYN +I G    G ++ A DL  +M  +   PD++T D L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + G     +     E+   M++ K   DAS
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 222/451 (49%), Gaps = 7/451 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF+ +      P+V+ +  L+  + R     + ++L+++M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                  + +  +++ +I   C    +  A + F ++    ++PDVVT+N+L+HGLC  +
Sbjct: 110 ------IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVED 163

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA  LF +M +   +P+VVTF  +M+ LC+  ++ EA  LLD M++ G++P   TY 
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 317 TLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           T++DG C  G    A  L   ME +     + V Y+ +I+  CK+    +A +L+ EM  
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KGI P + TYN++ +G     +   A +L  EM    ++ D  TY   I+   K G   E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A EL+  +       +   Y+ +IDG CK  RL  A  +F  +      PN++T+N +I 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C   ++D   +L  +M E     D  T++ LIHGF  + + +   +LL +M    + P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           D      ++D L  N     +L  F V ++ 
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 186/556 (33%), Positives = 297/556 (53%), Gaps = 48/556 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +A  +F  MLR  P P  V  F  L+  + + +  D       ++    +  ++Y++NIL
Sbjct: 62  DAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I CFC   ++      FG+I +    P+  TF +L+ GL  E R+ EA  LF ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
            PNV+T+ TL+NGLCR G  + A+ L + M     +         +  +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN V YS IID LCK+G    A+ LF +M+++ I PD+ TYNS+I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C +  W++A++L  EM+++ + P VVT+N +++   K  K  EA  L D M+ RG+ PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DGFC   +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G+     TYNTL  G + +  +  AL L  EM   G+  D  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 433 IIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +A+E+F+ ++  K +L           D+Q YN LI GL   G+   A EL+  +PH 
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +VP+ +TY+ MI GLC   ++D+A  +F  M   + +P+V+TF  LI+G+ +       
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 542 NELLHKMKEKKVMPDA 557
            EL  +M  + ++ +A
Sbjct: 601 LELFCEMGRRGIVANA 616



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 222/450 (49%), Gaps = 25/450 (5%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +LRS   P+   F  L+  +    R     +L+ K++      ++ ++N LI   C 
Sbjct: 67  FSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCS 126

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G+   P+ VT++T++ GLC E  V +A  LF QM +   
Sbjct: 127 CSKLPFALSTFGKIT----KLGL--HPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTC 180

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
            P+VVT+ +L++GLC      EA  L   MM+ G+QP+ +T+  I+D +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 291 --RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             RKM+E S ++         PN   Y+ ++D  C  G+ + A+ LF  M+  G   D  
Sbjct: 241 LLRKMEEVSHII---------PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +I G+C +    +A  L +EM+ + I P VVTYN L     +  +   A +L+DEM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  +T TY++ IDG CK   +  A  +F  +    C  ++  +N LIDG C + R+
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               EL   +    LV +  TYN +I G    G ++ A DL  +M  +   PD++T D L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + G     +     E+   M++ K   DAS
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 203/433 (46%), Gaps = 58/433 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ SL K+ +H D     T +   G+FP+L+TYN +I  FC  GR S     
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +P+  T+N+LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C PN +T++T+IDG C    +D    L  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD---- 294
             D  TYN+LIHG     D N A  L  EM+  G+ P +VT + ++D LC N K+     
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 295 ------------------------------------------EASRLLDLMVQRGVRPNA 312
                                                     EA  L + M  RG+ P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    +TY TL  G  ++  +  AL +F EM   GV  DT T    + GL     
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 433 IIEAVELFRTLRI 445
           +  AV +   L++
Sbjct: 667 LKRAVAMLEKLQM 679



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 187/382 (48%), Gaps = 9/382 (2%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF +M            P+ V +  ++  + +    D   +L+ +M+ + I  D+ +
Sbjct: 63  AIDLFSDMLRSRP------LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N LI   C  +    A   F ++   G+ P VVTF  ++  LC   ++ EA  L   M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +   RPN  T+ TLM+G C  G+I  A  L   M   G +   ++Y  +++G CK  +  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 365 EALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            AL+L R+M     I P VV Y+ +   L +  +   A  LF EMQ  G+  D  TY + 
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGV 482
           I G C +G   +A +L + +   K   D+  YN LI+   K G+   A EL+   LP G+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            +PN +TY+ MI G C   ++D A  +F  M     +P++ITF+ LI G+          
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 543 ELLHKMKEKKVMPDASIVSIVV 564
           ELLH+M E  ++ D +  + ++
Sbjct: 416 ELLHEMTETGLVADTTTYNTLI 437



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 1/324 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +R +  ++N L+  FC   K+  A   FG +  +G   D V++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +L+ +M     +P VVT+ TL  GL    ++  A+ L D M  DG+     TY T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 428 CKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           CK G  + A+ L R +  +   + ++  Y+ +ID LCK GR   A  LF  +    + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           + TYN MI G C+ G+   A  L  +M E   +PDV+T++ LI+ F++  +  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 547 KMKEKKVMPDASIVSIVVDLLVKN 570
           +M  + ++P+    S ++D   K 
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQ 373


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 205/598 (34%), Positives = 307/598 (51%), Gaps = 56/598 (9%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK-----HYDTRLN 88
           +L  + G     + ++A   FDYM+R  P    V    ++   +  N+         ++ 
Sbjct: 74  ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME 133

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI- 147
              +  N+Y++NILI CFC   ++S     FG++ +  F P+  TFN+L+ GL  E RI 
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS 193

Query: 148 --------------MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
                         +EA ALF ++   G  P VIT+NTLINGLC  G  + A  L  +M 
Sbjct: 194 EALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253

Query: 194 NGNGEIGVVC-----------------------------KPNTVTYSTIIDGLCKEGFVD 224
                I VV                              KP+ V YS IID LCK+G   
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A+ LF +M ++ I P+V TYN +I G C    W++A+RL  +M+++ + P V+TFN ++
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
               K  K+ EA +L D M+ R + P+  TYN+++ GFC   + + A+ +F  M S    
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---- 429

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D V++N +I+ YC+ K V+E + L RE+  +G+     TYNTL  G  E+  +  A  L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F EM   GV  DT T    + G C+N  + EA+ELF  +++ K +LD  AYN +I G+CK
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549

Query: 465 SGRLKFAWELFCSLP-HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             ++  AW+LFCSLP HGV  P+V TYN+MI G C    +  A  LF  M++N   PD  
Sbjct: 550 GSKVDEAWDLFCSLPIHGV-EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
           T++ LI G ++  E  K  EL+ +M+      DA  + +V DL+    +  KS    L
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLD-KSFSDML 665



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 204/429 (47%), Gaps = 27/429 (6%)

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N +I    R     +A++L+ +M     EI  +   N  +++ +I   C    +  + + 
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKM-----EIRRI-PLNIYSFNILIKCFCDCHKLSFSLST 163

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF-----------IEMMDQ----GVQ 274
           F ++      PDVVT+N+L+HGLC  +  +EA  LF           + + DQ    G+ 
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P V+TFN +++ LC   ++ EA+ L++ MV +G+  +  TY T+++G C MG    A  L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ME    K D V Y+ +I+  CK+    +A  L+ EM+ KGI P V TYN +  G   
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQ 453
             +   A +L  +M    +  D  T+   I    K G + EA +L   + + +C   D  
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-LHRCIFPDTV 402

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN +I G CK  R   A  +F  +      P+VVT+N +I   C   ++D+   L  ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
                  +  T++ LIHGF  ++  +   +L  +M    V PD    +I++    +NE  
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518

Query: 574 LKSLPSFLV 582
            ++L  F V
Sbjct: 519 EEALELFEV 527


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 177/444 (39%), Positives = 273/444 (61%), Gaps = 6/444 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   TFN+L+ GL ++++IM+A  LF ++   G EP+VITY+T+INGLC+ G+T +AL L
Sbjct: 8   PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            ++M          CKPN V Y+TIID LCK+  V +A   F +M  E I PDV TY+S+
Sbjct: 68  LKKMEEKG------CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSI 121

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           +HG C+    NEA  LF +M+++ V P+ VTF +++D LCK R + EA  + + M ++G+
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  TYN L+DG+C   +++ A++LF  M+  GC  +  SYNILING+CK+  ++EA  
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L  EM  K + P + TY+TL  G  ++ + + A +L  EM   G+  +  TY+  +DGLC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+G++ EA EL + ++  K E +I  Y  LI+G+C  G+L+ A ELF +L    + P VV
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY +MI GL   G  ++A +LF +M  N   P+  T++++I GF+R  +      L+ +M
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421

Query: 549 KEKKVMPDASIVSIVVDLLVKNEI 572
             K    D+S   ++ DL   +EI
Sbjct: 422 VGKGFSADSSTFRMLSDLESSDEI 445



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/438 (32%), Positives = 229/438 (52%), Gaps = 6/438 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P L T+N L++  C   ++      F  +++    P+  T++++I GL        A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  K++  GC+PNV+ YNT+I+ LC+      A++ F EM            P+  TY
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG------IPPDVFTY 118

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S+I+ G C  G V++A +LF QM + N+ P+ VT+  LI GLC     +EA  +F  M +
Sbjct: 119 SSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTE 178

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++P V T+N ++D  C   +MDEA +L ++M ++G  PN  +YN L++G C  G+I+ 
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+ L   M       D  +Y+ L+ G+C+    +EA  L +EM S G+ P ++TY+ +  
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +   ++ A +L   MQ   +  +   YT  I+G+C  G +  A ELF  L +   + 
Sbjct: 299 GLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            +  Y  +I GL K G    A ELF  +     +PN  TYN++IQG   +G    A  L 
Sbjct: 359 TVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLI 418

Query: 511 LDMEENAAAPDVITFDML 528
            +M     + D  TF ML
Sbjct: 419 EEMVGKGFSADSSTFRML 436



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 208/370 (56%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +P  VT++T++ GLC +  +  A  LF +M      PDV+TY+++I+GLC   +   A +
Sbjct: 7   QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  +M ++G +P+VV +N I+D LCK+R + EA      MV+ G+ P+  TY++++ GFC
Sbjct: 67  LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +G++N A  LF  M       + V++ ILI+G CK + + EA  ++  M  KG++P V 
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN L  G     Q++ A KLF+ M R G A + R+Y   I+G CK+G I EA  L   +
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  DI  Y+ L+ G C+ GR + A EL   +    L+PN++TY+I++ GLC  G +
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A +L   M+E+   P++  + +LI G     +     EL   +  K + P     +++
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVM 366

Query: 564 VDLLVKNEIS 573
           +  L+K  +S
Sbjct: 367 ISGLLKGGLS 376



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 173/303 (57%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G+QP++VTFN ++  LC   K+ +A +L D MV+ G  P+  TY+T+++G C MG 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A +L   ME  GCK + V+YN +I+  CK++ V EA+  + EMV +GI P V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G   + +V  A  LF +M    V  +  T+T  IDGLCK   I EA  +F T+    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E D+  YN L+DG C   ++  A +LF  +      PNV +YNI+I G C  G++D+A+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            L  +M   +  PD+ T+  L+ GF ++  P +  ELL +M    ++P+    SIV+D L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 568 VKN 570
            K+
Sbjct: 301 CKH 303



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 36/412 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +A  +FD M++M    P V +++ ++  L K  +         ++   G  PN+  YN +
Sbjct: 28  DAVKLFDEMVKMG-HEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTI 86

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK   V+     F  +++    P+  T++S++ G     R+ EA +LF ++     
Sbjct: 87  IDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNV 146

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV-------------------- 202
            PN +T+  LI+GLC+      A  +FE M     E  V                     
Sbjct: 147 IPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQK 206

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN  +Y+ +I+G CK G +D+AK L  +M  +++ PD+ TY++L+ G C
Sbjct: 207 LFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFC 266

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                 EA+ L  EM   G+ P+++T+++++D LCK+  +DEA  LL  M +  + PN  
Sbjct: 267 QVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIF 326

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            Y  L++G C  GK+  A ELF ++   G +   V+Y ++I+G  K     EA  L+REM
Sbjct: 327 IYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREM 386

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              G  P   TYN +  G        +A++L +EM   G +AD+ T+    D
Sbjct: 387 AVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 138/279 (49%), Gaps = 13/279 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNI 101
           +EA+ +F+ M       P V ++N L+         D        ++  G  PN+ +YNI
Sbjct: 167 SEAWLVFETMTE-KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI 225

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN  CK GR+         +     TP+  T+++L++G     R  EA  L  ++ ++G
Sbjct: 226 LINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN+ITY+ +++GLC+ GH   A  L + M     E      PN   Y+ +I+G+C  G
Sbjct: 286 LLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE------PNIFIYTILIEGMCTFG 339

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A+ LF  +  + I P VVTY  +I GL      NEA  LF EM   G  P+  T+N
Sbjct: 340 KLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYN 399

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           VI+    +N     A RL++ MV +G   ++ T+  L D
Sbjct: 400 VIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 59/105 (56%)

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L P +VT+N ++ GLC+  ++  A  LF +M +    PDVIT+  +I+G  ++   +   
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +LL KM+EK   P+    + ++D L K+ +  +++  F    ++G
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG 110


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 185/556 (33%), Positives = 296/556 (53%), Gaps = 48/556 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +A  +F  MLR  P P  V  F  L+  + + +  D       ++    +  ++Y++NIL
Sbjct: 62  DAIDLFSDMLRSRPLPS-VVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I CFC   ++      FG+I +    P+  TF +L+ GL  E R+ EA   F ++    C
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
            PNV+T+ TL+NGLCR G  + A+ L + M     +         +  +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN V YS IID LCK+G    A+ LF +M+++ I PD+ TYNS+I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C +  W++A++L  EM+++ + P VVT+N +++   K  K  EA  L D M+ RG+ PN 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DGFC   +++ AE +F  M + GC  + +++N LI+GYC  K +++ + L  E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G+     TYNTL  G + +  +  AL L  EM   G+  D  T  T +DGLC NG 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 433 IIEAVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +A+E+F+ ++  K +L           D+Q YN LI GL   G+   A EL+  +PH 
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +VP+ +TY+ MI GLC   ++D+A  +F  M   + +P+V+TF  LI+G+ +       
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 542 NELLHKMKEKKVMPDA 557
            EL  +M  + ++ +A
Sbjct: 601 LELFCEMGRRGIVANA 616



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 203/433 (46%), Gaps = 58/433 (13%)

Query: 65  PPVSSFNILLASLAKN-KHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++ SL K+ +H D     T +   G+FP+L+TYN +I  FC  GR S     
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L    +P+  T+N+LI     E +  EA  L+ ++   G  PN ITY+++I+G C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA         C PN +T++T+IDG C    +D    L  +M +  +
Sbjct: 373 QNRLDAAEHMFYLMATKG------CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGL 426

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD---- 294
             D  TYN+LIHG     D N A  L  EM+  G+ P +VT + ++D LC N K+     
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486

Query: 295 ------------------------------------------EASRLLDLMVQRGVRPNA 312
                                                     EA  L + M  RG+ P+ 
Sbjct: 487 MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY++++DG C   +++ A ++F SM S     + V++  LINGYCK   V++ L L+ E
Sbjct: 547 ITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 606

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI    +TY TL  G  ++  +  AL +F EM   GV  DT T    + GL     
Sbjct: 607 MGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666

Query: 433 IIEAVELFRTLRI 445
           +  AV +   L++
Sbjct: 667 LKRAVAMLEKLQM 679



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 221/450 (49%), Gaps = 25/450 (5%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +LRS   P+   F  L+  +    R     +L+ K++      ++ ++N LI   C 
Sbjct: 67  FSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCS 126

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G+   P+ VT++T++ GLC E  V +A   F QM +   
Sbjct: 127 CSKLPFALSTFGKIT----KLGL--HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
            P+VVT+ +L++GLC      EA  L   MM+ G+QP+ +T+  I+D +CK         
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 291 --RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             RKM+E S ++         PN   Y+ ++D  C  G+ + A+ LF  M+  G   D  
Sbjct: 241 LLRKMEEVSHII---------PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +I G+C +    +A  L +EM+ + I P VVTYN L     +  +   A +L+DEM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  +T TY++ IDG CK   +  A  +F  +    C  ++  +N LIDG C + R+
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               EL   +    LV +  TYN +I G    G ++ A DL  +M  +   PD++T D L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + G     +     E+   M++ K   DAS
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 186/382 (48%), Gaps = 9/382 (2%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF +M            P+ V +  ++  + +    D   +L+ +M+ + I  D+ +
Sbjct: 63  AIDLFSDMLRSRP------LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N LI   C  +    A   F ++   G+ P VVTF  ++  LC   ++ EA      M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +   RPN  T+ TLM+G C  G+I  A  L   M   G +   ++Y  +++G CK  +  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 365 EALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            AL+L R+M     I P VV Y+ +   L +  +   A  LF EMQ  G+  D  TY + 
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGV 482
           I G C +G   +A +L + +   K   D+  YN LI+   K G+   A EL+   LP G+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            +PN +TY+ MI G C   ++D A  +F  M     +P++ITF+ LI G+          
Sbjct: 357 -IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGM 415

Query: 543 ELLHKMKEKKVMPDASIVSIVV 564
           ELLH+M E  ++ D +  + ++
Sbjct: 416 ELLHEMTETGLVADTTTYNTLI 437



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 161/324 (49%), Gaps = 1/324 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L  G        +A  LF +M+     PSVV F  +M  + +  + D    L   M ++ 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +R +  ++N L+  FC   K+  A   FG +  +G   D V++  L++G C    V EAL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
             + +M     +P VVT+ TL  GL    ++  A+ L D M  DG+     TY T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 428 CKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           CK G  + A+ L R +  +   + ++  Y+ +ID LCK GR   A  LF  +    + P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           + TYN MI G C+ G+   A  L  +M E   +PDV+T++ LI+ F++  +  +  EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 547 KMKEKKVMPDASIVSIVVDLLVKN 570
           +M  + ++P+    S ++D   K 
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQ 373


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 198/537 (36%), Positives = 309/537 (57%), Gaps = 28/537 (5%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           N  F+F   P S+ + NF    + +  ++T   + N +   +AF +F  +LR +P+PP +
Sbjct: 26  NTHFNFI--PYSSSKINF----IPYSSISTTFHNNNDVV--DAFSLFSRLLRQNPTPPAI 77

Query: 68  SSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
             FN +L SL K+KHY T L+ +               F  I  V   F    +++   +
Sbjct: 78  E-FNKILGSLVKSKHYHTVLSLSQQME-----------FEGINPVLFHFQHPHQLMG--Y 123

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
            PN  TF +LIKGL  + +I +A      + A G + + + Y TLI+GLC+ G T  AL+
Sbjct: 124 HPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALD 183

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L   + +GN     + +PN V YSTIIDG+CK+  V+ A  L+ +M  + I+P+VVTY++
Sbjct: 184 LLRRV-DGN-----LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 237

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI G        +A  LF +M+ + ++P V TFN+++D  CK+ KM E   +  +M+++G
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 297

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           ++PN  TY +LMDG+CL+ ++N+A+ +  +M   G   D  SYNILI+G+CK K+V+EA+
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +L++EM  K I P VVTYN+L  GL ++ ++ +ALKL DEM   GV  D  TY++ +D L
Sbjct: 358 NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CKN  + +A+ L   L+      ++  Y  LIDGLCK GRL+ A  +F  L        V
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            TY +MI G CN G  D+A  L   M++N+  PD +T++++I      +E  K  +L
Sbjct: 478 NTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/517 (32%), Positives = 256/517 (49%), Gaps = 28/517 (5%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           P    SF  L     KN H++    ++    N   Y+ +   F     V   F  F R+L
Sbjct: 15  PKKFHSFQFL-----KNTHFNFIPYSSSKI-NFIPYSSISTTFHNNNDVVDAFSLFSRLL 68

Query: 124 RSCFTPNAATFN----SLIKGLHAE-----SRIMEAAALFTKLKAF-------GCEPNVI 167
           R   TP A  FN    SL+K  H       S+ ME   +   L  F       G  PN I
Sbjct: 69  RQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTI 128

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T+ TLI GLC  G    AL LF +     G      + + V Y T+I GLCK G    A 
Sbjct: 129 TFTTLIKGLCLKGQIHQAL-LFHDNVVAMG-----FQLDQVGYGTLIHGLCKVGETRAAL 182

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  ++    + P+VV Y+++I G+C     N+A  L+ EM+ +G+ P+VVT++ ++   
Sbjct: 183 DLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 242

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
               ++ +A  L + M+   ++P+  T+N L+DGFC  GK+   + +F  M   G K + 
Sbjct: 243 FTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV 302

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y  L++GYC  KEV +A S+   M  +G+ P + +YN L  G  +I +V+ A+ LF E
Sbjct: 303 VTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKE 362

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M    +  D  TY + IDGLCK G I  A++L   +       DI  Y+ ++D LCK+ +
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 422

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A  L   L    + PN+ TY I+I GLC  G+++ A ++F D+        V T+ +
Sbjct: 423 VDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 482

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +IHGF       +   LL KMK+   +PDA    I++
Sbjct: 483 MIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 192/352 (54%), Gaps = 12/352 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  ++ ++  + K+KH +      + + + G+ PN+ TY+ LI+ F  +G++      
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     P+  TFN L+ G   + ++ E   +F  +   G +PNV+TY +L++G C 
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 314

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++   M+    + GV   P+  +Y+ +IDG CK   VD+A  LF +M  ++I
Sbjct: 315 VKEVNKAKSILYTMS----QRGV--NPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVTYNSLI GLC     + A +L  EM D+GV P ++T++ I+D LCKN ++D+A  
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  +  +G+RPN  TY  L+DG C  G++  A  +F  +   G      +Y ++I+G+C
Sbjct: 429 LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC 488

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
                +EAL+L  +M      P  VTY  +   LF+  + + A KL + + R
Sbjct: 489 NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 200/417 (47%), Gaps = 51/417 (12%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           K N + YS+I         V  A +LF ++  +N  P  + +N ++  L  +  ++    
Sbjct: 38  KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLS 97

Query: 264 LFIEMMDQGV----------------QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L  +M  +G+                 P+ +TF  ++  LC   ++ +A    D +V  G
Sbjct: 98  LSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMG 157

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            + +   Y TL+ G C +G+   A +L   ++    + + V Y+ +I+G CK+K V +A 
Sbjct: 158 FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAF 217

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            LY EMVSKGI P VVTY+ L  G F + Q++ A+ LF++M  + +  D  T+   +DG 
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277

Query: 428 CKNGYIIEAVELFRTLR--------ILKCEL---------------------------DI 452
           CK+G + E   +F  +         +  C L                           DI
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           Q+YN LIDG CK  ++  A  LF  + H  ++P+VVTYN +I GLC  G++  A  L  +
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M +    PD+IT+  ++    + ++  K   LL K+K++ + P+    +I++D L K
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCK 454


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 202/554 (36%), Positives = 301/554 (54%), Gaps = 24/554 (4%)

Query: 9   RSFSFASAPISAFRSNFSSLLVHFRDLTTREGDI--------NVITPNEAFCIFDYMLRM 60
           R  S  S  +S FR    SLL + +   TR   +        N    N+A  +F+ ML M
Sbjct: 7   RLRSAPSLSVSLFRH---SLLCYSQSACTRASAMLHSQSHYNNHNDHNDAVALFNRMLLM 63

Query: 61  HPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSL 114
            P PPP   FN +L+SL K + + T       L+  G+  +L T NILINCFC +G+++L
Sbjct: 64  RP-PPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITL 122

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            F     IL+  + P+  T  +LIKGL     + +A      + A   + + I+Y TLIN
Sbjct: 123 SFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLIN 182

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GLC+ G T  A+ L   +   +       KP+ V Y+ IID LCK   V +A  L+ +M 
Sbjct: 183 GLCKIGETKAAIQLMRNLEERS------IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMN 236

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + I P+VVTY +LI+G C      EA  L  EM  + + P V TF++++D L K  KM 
Sbjct: 237 AKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMK 296

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  +L +M++  V+P+  TYN+L+DG+ L+ ++  A+ +F SM   G      SY I+I
Sbjct: 297 AAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMI 356

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G CK K V+EA+SL+ EM  K + P  +T+N+L  GL +  ++ +   L D+M+     
Sbjct: 357 DGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQL 416

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
           AD  TY++ ID LCKN ++ +A+ LF+ +   + + D+  Y  LIDGLCK GRLK A E+
Sbjct: 417 ADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEV 476

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  L       ++ TY +MI G C  G  D+A  L   ME+N   P+ ITFD++I     
Sbjct: 477 FQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFE 536

Query: 535 INEPSKVNELLHKM 548
            +E  K  +LL +M
Sbjct: 537 KDENDKAEKLLREM 550



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 187/355 (52%), Gaps = 12/355 (3%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +NI++ SL KNK      +  + +NA  ++PN+ TY  LI  FC +G +      
Sbjct: 207 PDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVAL 266

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  TF+ LI  L  E ++  A  +   +     +P+V+TYN+L++G   
Sbjct: 267 LNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFL 326

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  +F  MA      GV   P   +Y+ +IDGLCK   VD+A +LF +MK +N+
Sbjct: 327 VNEVKHAKYVFNSMAQS----GVT--PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV 380

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ +T+NSLI GLC +        L  +M D+     V+T++ ++D LCKN  +D+A  
Sbjct: 381 IPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIA 440

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M+ + ++P+  TY  L+DG C  G++  A+E+F  +   G   D  +Y ++I+G+C
Sbjct: 441 LFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFC 500

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           K    +EAL+L  +M   G  P  +T++ +   LFE  + + A KL  EM   G+
Sbjct: 501 KAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 180/382 (47%), Gaps = 35/382 (9%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           + A ALF +M      P    +N+++  L     +  A  L   +  +G+   +VT N++
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++  C   ++  +  +L  +++RG  P+  T  TL+ G CL G++ +A +    + ++  
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + D +SY  LING CK  E + A+ L R +  + IKP VV YN +   L +   V  A  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L+ EM    +  +  TYTT I G C  G +IEAV L   +++     D+  ++ LID L 
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYN-------------------------------- 491
           K G++K A  +   +    + P+VVTYN                                
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350

Query: 492 ---IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
              IMI GLC    +D+A  LF +M+     P+ ITF+ LI G  +    + V +L+ KM
Sbjct: 351 SYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM 410

Query: 549 KEKKVMPDASIVSIVVDLLVKN 570
           +++  + D    S ++D L KN
Sbjct: 411 RDRSQLADVITYSSLIDALCKN 432



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 164/338 (48%), Gaps = 3/338 (0%)

Query: 246 NSLIHGLCH---ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           ++++H   H    ND N+A  LF  M+     P    FN I+  L K ++   A  L   
Sbjct: 35  SAMLHSQSHYNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKH 94

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           +  +G+  +  T N L++ FC +G+I  +  +  ++   G   D ++   LI G C   E
Sbjct: 95  LDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGE 154

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V++AL  + ++V+   +   ++Y TL  GL +I + + A++L   ++   +  D   Y  
Sbjct: 155 VKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNI 214

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            ID LCKN  + EA  L+  +   +   ++  Y  LI G C  G L  A  L   +    
Sbjct: 215 IIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKN 274

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+V T++I+I  L  +G+M  A+ +   M +    PDV+T++ L+ G+  +NE     
Sbjct: 275 INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAK 334

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            + + M +  V P     +I++D L K ++  +++  F
Sbjct: 335 YVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLF 372


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 199/613 (32%), Positives = 317/613 (51%), Gaps = 69/613 (11%)

Query: 9   RSFSFASAPISAFR-----SNFSSLLVHFRD------------LTTREGDINVITPNEAF 51
           RS S++S  +SA R     S   +L    RD            L  + G   +   ++A 
Sbjct: 7   RSGSYSSPAVSAARLFCTRSIRDTLAKKSRDGESDEAGFGGESLKLQSGFHEIKGLDDAI 66

Query: 52  CIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINC 105
            +F YM+R  P P  V  F  L+  + +    D       ++    +  N Y++ IL+ C
Sbjct: 67  DLFGYMVRSRPLPS-VIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKC 125

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           FC   ++      FG+I +  F P   TFN+L+ GL  E RI EA  LF ++    C+PN
Sbjct: 126 FCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPN 181

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK------------ 204
           V+T+ TL+NGLCR G  + A+ L + M     +         +  +CK            
Sbjct: 182 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 241

Query: 205 ---------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                    PN V Y+TIIDGL K+G    A  LF++M+++ I PD+VTYN +I+G C +
Sbjct: 242 KMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCIS 301

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
             W++A++L  EM+++ + P VVTF+ +++   K  K  EA  L D M+ R + P+  TY
Sbjct: 302 GRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           ++++DGFC   +++ AE +F    + GC  D +++N LI GYC+ K V++ + L  EM  
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 421

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G+    +TY TL  G  ++  +  A  L  EM   GV  +  T  T +DGLC NG + +
Sbjct: 422 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKD 481

Query: 436 AVELFRTLRILKCEL-----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           A+E+F+ ++  K ++           D+Q YN LI GL   G+   A EL+  +PH  +V
Sbjct: 482 ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+ +TY+ MI GLC   ++D+A  +F  M   + +PDV+TF+ LI G+ +        EL
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601

Query: 545 LHKMKEKKVMPDA 557
             +M ++ ++ DA
Sbjct: 602 FCEMGQRGIVADA 614



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 263/524 (50%), Gaps = 37/524 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F  M +     P V +F  L+  L +            R+   GL PN  TY  
Sbjct: 168 SEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 222

Query: 102 LINCFCKIGRVSLGFIAFGRILR-----SCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           +++  CK+G      ++   +LR     S   PN   +N++I GL  + R  +A  LF +
Sbjct: 223 IVDGMCKMGDT----VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIE 278

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++     P+++TYN +ING C +G    A  L +EM            P+ VT+S +I+ 
Sbjct: 279 MQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK------INPDVVTFSALINA 332

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
             KEG   +A+ L+ +M   +I P  VTY+S+I G C  N  + A+ +F     +G  P 
Sbjct: 333 FVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPD 392

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           ++TFN ++   C+ +++D+  +LL  M + G+  N  TY TL+ GFC +G +N A++L  
Sbjct: 393 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 452

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-----------GIKPTVVTY 385
            M S G   + V+ N L++G C N ++++AL +++ M              G++P V TY
Sbjct: 453 EMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  GL    +   A +L++EM   G+  DT TY++ IDGLCK   + EA ++F ++  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D+  +N LI G CK+G +    ELFC +    +V + +TY  +I G      +D 
Sbjct: 573 KSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDG 632

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           A D+F +M  +   PD IT   ++ G     E  +   +L  ++
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 190/363 (52%), Gaps = 17/363 (4%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++ T++ LIN F K G+       +  +L     P+  T++S+I G   ++R+  A  +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F      GC P++IT+NTLI G CR       + L  EM     E G+V   NT+TY+T+
Sbjct: 381 FYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT----EAGLVA--NTITYTTL 434

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM----M 269
           I G C+ G ++ A+ L  +M    + P+VVT N+L+ GLC      +A  +F  M    M
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 270 D-------QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           D        GV+P V T+N+++  L    K  EA  L + M  RG+ P+  TY++++DG 
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   +++ A ++F SM S     D V++N LI GYCK   V++ L L+ EM  +GI    
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TY TL  G  ++  ++ AL +F EM   GV  DT T    + GL     +  AV +   
Sbjct: 615 ITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLED 674

Query: 443 LRI 445
           L++
Sbjct: 675 LQM 677



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 218/450 (48%), Gaps = 29/450 (6%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG ++RS   P+   F  L+  +    R     +L  K++      N  ++  L+   C 
Sbjct: 69  FGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCS 128

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+ F ++     ++G    P  VT++T++ GLC E  + +A  LF QM     
Sbjct: 129 CSKLPFALSTFGKIT----KLGF--HPTVVTFNTLLHGLCVEDRISEALDLFHQM----C 178

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-------- 290
            P+VVT+ +L++GLC      EA  L   M++ G+QP+ +T+  I+D +CK         
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238

Query: 291 --RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             RKM+E S ++         PN   YNT++DG    G+ + A  LF  M+      D V
Sbjct: 239 LLRKMEEVSHII---------PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +ING+C +    +A  L +EM+ + I P VVT++ L     +  +   A +L+DEM
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
               +   T TY++ IDG CK   +  A  +F       C  DI  +N LI G C++ R+
Sbjct: 350 LPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRV 409

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               +L   +    LV N +TY  +I G C  G ++ A+DL  +M  +   P+V+T + L
Sbjct: 410 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTL 469

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + G     +     E+   M++ K+  DAS
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKMDIDAS 499



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 214/435 (49%), Gaps = 11/435 (2%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF  +      P+VI +  L+  + R G   + ++L ++M    
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEM-- 109

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
             + + C  N  +++ ++   C    +  A + F ++     +P VVT+N+L+HGLC  +
Sbjct: 110 --LRMPC--NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVED 165

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA  LF +M     +P+VVTF  +M+ LC+  ++ EA  LLD M++ G++PN  TY 
Sbjct: 166 RISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 221

Query: 317 TLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           T++DG C MG    A  L   ME +     + V YN +I+G  K+    +A +L+ EM  
Sbjct: 222 TIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQE 281

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           K I P +VTYN +  G     +   A +L  EM    +  D  T++  I+   K G   E
Sbjct: 282 KEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFE 341

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A EL+  +           Y+ +IDG CK  RL  A  +F   P     P+++T+N +I 
Sbjct: 342 AEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIA 401

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C   ++D    L  +M E     + IT+  LIHGF ++ + +   +LL +M    V P
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461

Query: 556 DASIVSIVVDLLVKN 570
           +    + ++D L  N
Sbjct: 462 NVVTCNTLLDGLCDN 476


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/507 (35%), Positives = 293/507 (57%), Gaps = 11/507 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNI 101
           ++A   F+++L M+   PP+  FN +L+SL K  H+        ++   G+ P ++T+NI
Sbjct: 34  DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCF  + +++  F    +IL+  + P+  T N+L++GL    ++ EA      +    
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              + ++Y TLINGLC++G T  AL L  ++     E  ++ +P+ + Y+ IID  CK+ 
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKI-----EGLLLVRPDVIMYTAIIDSFCKDK 208

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V  A  L+ +M  + I P+VVT+NSLI+G C      EA  L  EM    V P+V TFN
Sbjct: 209 LVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFN 268

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D LCK  ++ +A+ +L +M+++GV PN  TY +LMDG+ L+ ++N+A+ +F ++   
Sbjct: 269 ILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLR 328

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   +  SY+++ING CKNK V+EA+ L++EM  K + P  VTY++L  GL +  ++   
Sbjct: 329 GVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDV 388

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             L DE+   G  A+  TY + ++GLCKN  + +A+ L   ++    + D+  Y  L+DG
Sbjct: 389 WDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDG 448

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LCK+GRLK A  ++  L       N+  Y +MI GLC +G  D+A  L   ME+N   PD
Sbjct: 449 LCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPD 508

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKM 548
            +T++ LI    + N+  K  +LL +M
Sbjct: 509 AVTYETLISALFKNNKNGKAVKLLREM 535



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 6/283 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+YT+NILI+  CK G V         +++    PN  T+ SL+ G      + +A  +
Sbjct: 262 PNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHV 321

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +   G  PNV +Y+ +INGLC+      A+ LF+EM   N        PNTVTYS++
Sbjct: 322 FNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKN------MTPNTVTYSSL 375

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGLCK G +     L  ++ +     +++TYNSL++GLC  +  ++A  L  +M D+G+
Sbjct: 376 IDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGI 435

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           QP + T+  ++D LCKN ++ +A R+   ++ +G   N   Y  +++G C  G  + A  
Sbjct: 436 QPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALS 495

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           L   ME  GC  D V+Y  LI+   KN +  +A+ L REM+++
Sbjct: 496 LLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 1/239 (0%)

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +N +++   K    + A+S  ++M  KGI+P + T+N L      + Q+  A  +  ++ 
Sbjct: 56  FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           + G   DT T  T + GLC NG + EA+     +   +  LD  +Y  LI+GLCKSG  +
Sbjct: 116 KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETR 175

Query: 470 FAWELFCSLPHGVLV-PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            A +L   +   +LV P+V+ Y  +I   C D  +  A DL+ +M      P+V+TF+ L
Sbjct: 176 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSL 235

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           I+GF  + +  +   LL++M    V P+    +I++D L K     K+     V  +QG
Sbjct: 236 IYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 209/587 (35%), Positives = 313/587 (53%), Gaps = 30/587 (5%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           +  FS +  PIS   ++ + LL   R L T +  +       A   F  ML + P P  +
Sbjct: 24  SHPFSTSPPPISD-AAHRTLLLNSIRTLETADAVV-------AVDFFHRMLTLTPFPC-I 74

Query: 68  SSFNILLASLAKNKHYDTRLNATGLFPNLY-------TYNILINCFCKIGRVSLGFIAFG 120
             FN+L   +AK++HY T ++   +  +L        T NI INC C + + +LGF   G
Sbjct: 75  QDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLG 134

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + +    P   T N+++ GL  E  +  A  L  K++  G   N  TY  L+NGLC+ G
Sbjct: 135 LMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIG 194

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            T  AL   ++M   N        PN V Y+ I+DGLCK G V +A  L  +M   N+ P
Sbjct: 195 DTSGALECLKKMVKRN------LGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEP 248

Query: 241 DVVTYNSLIHGLC-HANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +VVTYN LI GLC     W E   LF EM+ ++G+ P V TF++++D  CK   +  A  
Sbjct: 249 NVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAES 308

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM--ESMGCKHDDVSYNILING 356
           ++  MV+ GV PN  TYN+L+ G+CL  ++  A  +FG M  E  GC    V++N LI+G
Sbjct: 309 VVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHG 368

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +CK KEV++A+SL  EMV KG+ P V T+ +L  G  E+ +   A +LF  M+  G   +
Sbjct: 369 WCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPN 428

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF- 475
            +T    +DGL K     EAV LFR +     +LDI  YN ++DG+CK G+L  A +L  
Sbjct: 429 LQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLS 488

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
           C L  G+ + +  TYNIMI+GLC +G +D A +L   M+EN   P+  ++++ + G +R 
Sbjct: 489 CVLVKGLKI-DSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRK 547

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE--ISLKSLPSF 580
            + ++  + L  MK+K    DA+   +++  L  NE   S K  P  
Sbjct: 548 YDIARSRKYLQIMKDKGFPVDATTAELLIRFLSANEEDKSFKEFPQI 594



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 176/358 (49%), Gaps = 14/358 (3%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + DV T N  I+ LCH         +   M   G++P++VT N I++ LC    ++ A  
Sbjct: 107 SADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALW 166

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L++ M   G   NA TY  L++G C +G  + A E    M       + V YN +++G C
Sbjct: 167 LVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLC 226

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIHQVEHALKLFDEM-QRDGVAAD 416
           K   V EAL L  EM    ++P VVTYN L  GL  E       + LF+EM    G+  D
Sbjct: 227 KRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPD 286

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
            +T++  +DG CK G ++ A  +   +  +  E ++  YN LI G C   +++ A  +F 
Sbjct: 287 VQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVF- 345

Query: 477 SLPHGVLV-------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
               G++V       P+VVT+N +I G C   ++DKA  L  +M      PDV T+  LI
Sbjct: 346 ----GLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLI 401

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            GF  + +P    EL   MKE   +P+    ++V+D L+K  +  +++  F    + G
Sbjct: 402 GGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSG 459


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 199/586 (33%), Positives = 303/586 (51%), Gaps = 55/586 (9%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK-----HYDTRLN 88
           +L  + G     + ++A   FDYM+R  P    V    ++   +  N+         ++ 
Sbjct: 74  ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME 133

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI- 147
              +  N+Y++NILI CFC   ++S     FG++ +  F P+  TFN+L+ GL  E RI 
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS 193

Query: 148 --------------MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
                         +EA ALF ++   G  P VIT+NTLINGLC  G  + A  L  +M 
Sbjct: 194 EALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253

Query: 194 NGNGEIGVVC-----------------------------KPNTVTYSTIIDGLCKEGFVD 224
                I VV                              KP+ V YS IID LCK+G   
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A+ LF +M ++ I P+V TYN +I G C    W++A+RL  +M+++ + P V+TFN ++
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
               K  K+ EA +L D M+ R + P+  TYN+++ GFC   + + A+ +F  M S    
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---- 429

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D V++N +I+ YC+ K V+E + L RE+  +G+     TYNTL  G  E+  +  A  L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F EM   GV  DT T    + G C+N  + EA+ELF  +++ K +LD  AYN +I G+CK
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549

Query: 465 SGRLKFAWELFCSLP-HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             ++  AW+LFCSLP HGV  P+V TYN+MI G C    +  A  LF  M++N   PD  
Sbjct: 550 GSKVDEAWDLFCSLPIHGV-EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T++ LI G ++  E  K  EL+ +M+      DA  + +  +++ +
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 204/429 (47%), Gaps = 27/429 (6%)

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N +I    R     +A++L+ +M     EI  +   N  +++ +I   C    +  + + 
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKM-----EIRRI-PLNIYSFNILIKCFCDCHKLSFSLST 163

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF-----------IEMMDQ----GVQ 274
           F ++      PDVVT+N+L+HGLC  +  +EA  LF           + + DQ    G+ 
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P V+TFN +++ LC   ++ EA+ L++ MV +G+  +  TY T+++G C MG    A  L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ME    K D V Y+ +I+  CK+    +A  L+ EM+ KGI P V TYN +  G   
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQ 453
             +   A +L  +M    +  D  T+   I    K G + EA +L   + + +C   D  
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-LHRCIFPDTV 402

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN +I G CK  R   A  +F  +      P+VVT+N +I   C   ++D+   L  ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
                  +  T++ LIHGF  ++  +   +L  +M    V PD    +I++    +NE  
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518

Query: 574 LKSLPSFLV 582
            ++L  F V
Sbjct: 519 EEALELFEV 527



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 20/223 (8%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V  N +I  + +    + A+SLYR+M  + I   + ++N L     + H++  +L  F +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           + + G   D  T+ T + GLC    I EA+ LF              Y      + ++G 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALF-------------GY------MVETGF 207

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L+ A  LF  +    L P V+T+N +I GLC +G++ +A  L   M       DV+T+  
Sbjct: 208 LE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +++G  ++ +      LL KM+E  + PD  I S ++D L K+
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 186/518 (35%), Positives = 286/518 (55%), Gaps = 12/518 (2%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVS 113
           M+P PP    F  L   + K KHY T ++      + G+ P+++T  I+INC C +    
Sbjct: 1   MNPLPPD-KDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTV 59

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
            GF   G + +    P   TF +LI GL AE  +  AA     L+  G E N  T+ T+I
Sbjct: 60  FGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTII 119

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           NGLC+ G T  A++  E++   N    ++     + YSTI+D LCK+G +  A   F  M
Sbjct: 120 NGLCKVGDTAGAISYLEKIEGRNRGFDLL-----IAYSTIMDSLCKDGMLCLALNFFSGM 174

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             + I PD+V YNSLIHGLC    WNEA  L   MM +G+ P+V TFNV++D  CK  K+
Sbjct: 175 TCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKI 234

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
             A  ++  MV  GV P+  TYN+++ G CL+ ++N A ++F  M   G   + V+Y+ L
Sbjct: 235 SRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSL 294

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G+CK + + +A+ +  EMV+ G+   VVT++TL  G  +  + E A++LF  M     
Sbjct: 295 IHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQ 354

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             + +T    +DGL K  +  EA+ LFR +  +  EL+I  YN ++DG+C  G+   A E
Sbjct: 355 LPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARE 414

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  LP   +  +VV Y  MI+GLC +G +D A DL + MEEN   P+  T+++L+ G +
Sbjct: 415 LFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLL 474

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +  + S+  + L  MK K +  DA+   +++     N+
Sbjct: 475 QRYDISRSTKYLMLMKGKGLSADATTTELLISYFSANK 512



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 180/382 (47%), Gaps = 1/382 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P    ++T+   + K      A +L        + PDV T   +I+ LCH         +
Sbjct: 5   PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSV 64

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M   GV+P+VVTF  +++ LC    +  A+R  D +   G   N+ T+ T+++G C 
Sbjct: 65  LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124

Query: 325 MGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           +G    A      +E      D  ++Y+ +++  CK+  +  AL+ +  M  KGI+P +V
Sbjct: 125 VGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLV 184

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            YN+L  GL    +   A  L   M R G+  + +T+   +D  CK G I  A  +   +
Sbjct: 185 AYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
             +  E D+  YN +I G C   ++  A ++F  + H  L+PNVVTY+ +I G C    +
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           +KA  +  +M  N    DV+T+  LI GF +   P    EL   M E   +P+    +I+
Sbjct: 305 NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAII 364

Query: 564 VDLLVKNEISLKSLPSFLVQER 585
           +D L K +   +++  F   E+
Sbjct: 365 LDGLFKCQFHSEAISLFRKMEK 386


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 197/508 (38%), Positives = 288/508 (56%), Gaps = 22/508 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F  ML M  +PP +  FN +L S AK KHY T      RL    + P+ +T NI
Sbjct: 45  DDALFQFHRMLCMRHTPP-IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC +G+++L F    +IL+  + P+  T  +LIKGL  + ++ +A     KL A G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              + ++Y TLING+C+ G T  A+ L   +       G + +PN V Y+TIID LCK  
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRID------GRLTEPNVVMYNTIIDCLCKRK 217

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A  LF +M  + I+ +VVTY+++IHG C      EA     EM+ + + P V  +N
Sbjct: 218 LVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN 277

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D L K  K+ EA  +L ++V+  ++PN  TYNTL+DG+        A+ +F ++  M
Sbjct: 278 TLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLM 329

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  SYNI+IN  CK K VEEAL+LY+EM  K + P  VTYN+L  GL +  ++ +A
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             L DEM   G  A+  TY + I+GLCKNG + +A+ L   ++    + D+   N L+ G
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449

Query: 462 -LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            LCK  RLK A  LF  L      PNV TYNI+I G C +G +D+A  L   ME++  +P
Sbjct: 450 LLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKM 548
           + ITF ++I   +   E  K  +LL +M
Sbjct: 510 NAITFKIIICALLEKGETDKAEKLLCEM 537



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 222/451 (49%), Gaps = 15/451 (3%)

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
               F R+L    TP    FN ++             +L  +L+    +P+  T N LIN
Sbjct: 47  ALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILIN 106

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
             C  G   +A ++  ++     +      P+TVT +T+I GLC +G V KA     ++ 
Sbjct: 107 CFCHLGQINLAFSVLSKILKWGYQ------PDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            +    D V+Y +LI+G+C   +   A +L   +  +  +P+VV +N I+D LCK + + 
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVS 220

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L   M  +G+  N  TY+ ++ GFC++GK+  A      M       D   YN L+
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +   K  +V+EA ++   +V   +KP V+TYNTL  G        +A  +F+ +   GV 
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDG--------YAKHVFNAVGLMGVT 332

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  +Y   I+ LCK   + EA+ L++ +       +   YN LIDGLCKSGR+ +AW+L
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI- 533
              +       NV+TYN +I GLC +GQ+DKA  L   M++    PD+ T ++L+HG + 
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +         L   + +K   P+    +I++
Sbjct: 453 KGKRLKNAQGLFQDLLDKGYHPNVYTYNIII 483



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 189/358 (52%), Gaps = 21/358 (5%)

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           + P V  +N ++  L K K         + ++  G+  N+ TY+ +I+ FC +G+++   
Sbjct: 199 TEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEAL 258

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                ++     P+   +N+L+  LH E ++ EA  +   +     +PNVITYNTLI+G 
Sbjct: 259 GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY 318

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            +             + N  G +GV   P+  +Y+ +I+ LCK   V++A  L+ +M  +
Sbjct: 319 AK------------HVFNAVGLMGVT--PDVWSYNIMINRLCKIKRVEEALNLYKEMHQK 364

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           N+ P+ VTYNSLI GLC +   + A  L  EM D+G   +V+T+N +++ LCKN ++D+A
Sbjct: 365 NMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKA 424

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGK-INRAEELFGSMESMGCKHDDVSYNILIN 355
             L++ M  +G++P+  T N L+ G    GK +  A+ LF  +   G   +  +YNI+I 
Sbjct: 425 IALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIY 484

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           G+CK   ++EA +L  +M   G  P  +T+  +   L E  + + A KL  EM   G+
Sbjct: 485 GHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 168/348 (48%), Gaps = 8/348 (2%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A   F +M      P ++ +N ++        +     L   +  + +QP   T N+
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   +++ A  +L  +++ G +P+  T  TL+ G CL G++ +A      + + G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D VSY  LING CK  E   A+ L R +  +  +P VV YNT+   L +   V  A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF EM   G++A+  TY+  I G C  G + EA+     + +     D+  YN L+D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K G++K A  +   +    L PNV+TYN +I G         A+ +F  +      PDV
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDV 335

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +++++I+   +I    +   L  +M +K ++P+    + ++D L K+
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKS 383


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  337 bits (865), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 185/479 (38%), Positives = 272/479 (56%), Gaps = 13/479 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           N+A   F++M+  +P P  V  F  L ++L + KHY T      ++   G+  ++ +  I
Sbjct: 73  NDALSAFNHMVNTNPLPSIVK-FGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC++  V  GF   G+I++    PN  TF++LI G   E +I  A  LF  + A G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +PNV +Y+ +I GLCR G T   + L E M        V C+P+ V Y+TI+D LCK+ 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKV------VGCEPDVVIYNTIVDRLCKDR 245

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++A  +F +MK   I P VVTY SLIHGL +   W EA  L  EM    + P +V F+
Sbjct: 246 LVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFS 305

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++D +CK  ++ EA  +L  M + GV P+  TYNTLM+G+CL  ++  A ++F  M S 
Sbjct: 306 VLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK 365

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  S++IL+NGYCK K ++EA  L+ EM  +G+ P  V+YNTL  GL +  +   A
Sbjct: 366 GRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEA 425

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +LF +M  +G   +  TY+  +D L K GY+ +A+ LFR +     + D+  YN +IDG
Sbjct: 426 EELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDG 485

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           +CK G+ K A ELF  L    L PN       I G+C  G +D+A   F  ME++  +P
Sbjct: 486 MCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 231/468 (49%), Gaps = 6/468 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           AF  ++ +   P+   F  L   L          +L  +++  G   +V++   LIN  C
Sbjct: 78  AFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFC 137

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R  H     ++  ++      I +  +PN +T+ST+I+G C EG + +A  LF  M    
Sbjct: 138 RLCHVDYGFSVLGKI------IKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+V +Y+ +I GLC      E  +L   M   G +P VV +N I+D LCK+R ++EA 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +   M   G+ P   TY +L+ G   +G+   A  L   M+      D V++++LI+  
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  EV EA  + + M   G++P V TYNTL  G     +V  A K+F+ M   G   D 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +++  ++G CK   I EA +LF  +       D  +YN LI GLC++ R   A ELF  
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      PN+VTY+I++  L   G +D+A  LF  ME +   PD++T++++I G  +  +
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
                EL  ++  K + P+  + +  +D + K  +  ++  +F   E+
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 205/403 (50%), Gaps = 6/403 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL+ F  M N N        P+ V +  +   L +        +L  QM+   I+ DV++
Sbjct: 75  ALSAFNHMVNTNP------LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLS 128

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
              LI+  C     +    +  +++  G++P+V+TF+ +++  C   K+  A  L D+MV
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            RG +PN  +Y+ ++ G C +GK     +L   M+ +GC+ D V YN +++  CK++ V 
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+ ++ +M   GI PTVVTY +L  GL  + + + A  L +EM+   +  D   ++  I
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D +CK G + EA  + +T+  +  E D+  YN L++G C    +  A ++F  +     +
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V +++I++ G C   ++D+A+ LF +M      PD ++++ LI G  +   P +  EL
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              M      P+    SI++D L K     +++  F   E  G
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG 471



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 133/268 (49%)

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
           R +++A    + MV     P+   +  L      M        L   ME  G  HD +S 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            ILIN +C+   V+   S+  +++  G++P V+T++TL  G     ++  A++LFD M  
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   +  +Y+  I GLC+ G   E ++L   ++++ CE D+  YN ++D LCK   +  
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  +FC +    ++P VVTY  +I GL N G+  +A  L  +M+     PD++ F +LI 
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDAS 558
              +  E S+   +L  M E  V PD +
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVA 337



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 18/249 (7%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRL 87
           D+  +EG+++     EA  I   M  M   P  V+++N L+        + + +     +
Sbjct: 309 DIMCKEGEVS-----EARVILKTMTEMGVEPD-VATYNTLMNGYCLRMEVVEARKVFEVM 362

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
            + G  P++++++IL+N +CK  R+      F  +      P+  ++N+LI GL    R 
Sbjct: 363 ISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRP 422

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +EA  LF  + + G  PN++TY+ L++ L + G+   A+ LF  M N         KP+ 
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG------LKPDL 476

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+ +IDG+CK G    A+ LF ++  + + P+       I G+C     +EA + F +
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536

Query: 268 MMDQGVQPS 276
           M      P+
Sbjct: 537 MEKDDCSPA 545



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 35/212 (16%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + + +ALS +  MV+    P++V +  LF  L  +   +  + L  +M+  G++ D  + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  I+  C+                  C +D                  + + +   +  
Sbjct: 130 TILINCFCR-----------------LCHVD------------------YGFSVLGKIIK 154

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L PNV+T++ +I G C +G++ +A +LF  M      P+V ++ ++I G  R+ + ++
Sbjct: 155 LGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTE 214

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           V +LL  MK     PD  I + +VD L K+ +
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 7/169 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNI 101
           +EA  +FD M      P  VS +N L++ L + +           +++ G  PNL TY+I
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVS-YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++C  K G +      F  +  S   P+  T+N +I G+    +  +A  LF +L   G
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +PN       I+G+C+ G    A   F +M   +      C     TY
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCINGRATY 555


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 190/535 (35%), Positives = 292/535 (54%), Gaps = 13/535 (2%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           N  + + A   +  M+ M P P  V  FN+L + +AK KHY T       ++  G+ P +
Sbjct: 60  NAKSVDVALDFYHKMVTMKPFPC-VKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTV 118

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           +T NI+INC C++     GF   G + +    P+  TFN+++ GL  E  + +A      
Sbjct: 119 HTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDH 178

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           LK  G E +  T   + NGLC+ GH+  AL+  ++M   N      C  +   YS ++DG
Sbjct: 179 LKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKN------CNLDVTAYSGVVDG 232

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK+G V +A  LF QM  + I PD+ TYN LIHGLC+ + W EA  L   MM +G+ P 
Sbjct: 233 LCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 292

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V TFNVI     K   +  A  +   MV  G+  +  TY +++   C++ ++  A E+F 
Sbjct: 293 VQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFD 352

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M S GC  + V+Y  LI+G+C+ K + +A+    EMV+ G+ P VVT++TL  G+ +  
Sbjct: 353 LMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAG 412

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +   A +LF  M + G   + +T    +DGL K  +  EA+ LFR L  +  +L+I  YN
Sbjct: 413 KPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYN 472

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            ++DG+C SG+L  A ELF  L    +  +VVTYNIMI+GLC +G +D A DL + MEEN
Sbjct: 473 IILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEEN 532

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              P+  T+++ + G +R  + SK  + L  MK+K    DA+    +++    N+
Sbjct: 533 GCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFSANK 587



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 171/360 (47%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A +L   M    + P V T N +I+ LC  +       +   M   GV+PS+VTFN I++
Sbjct: 102 AISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVN 161

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LC    + +A R +D +   G   ++ T   + +G C +G  + A      ME   C  
Sbjct: 162 GLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNL 221

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D  +Y+ +++G CK+  V EAL+L+ +M  KGI+P + TYN L  GL    + + A  L 
Sbjct: 222 DVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLL 281

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
             M R G+  D +T+        K G I  A  +F  +  +  E D+  Y  +I   C  
Sbjct: 282 ANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCML 341

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            ++K A E+F  +     +PN+VTY  +I G C    M+KA     +M  N   P+V+T+
Sbjct: 342 NQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTW 401

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
             LI G  +  +P    EL   M +   +P+    +I++D L K     +++  F   E+
Sbjct: 402 STLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEK 461


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 190/560 (33%), Positives = 293/560 (52%), Gaps = 36/560 (6%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A   FD ML M P PPP   FN +L+SL  NKHY T      +  + G  P+L T NIL+
Sbjct: 47  AVASFDRMLLMRP-PPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILM 105

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           NCFC +  ++  F     IL+  + PNA T N+LIKGL     I +A     ++ A G +
Sbjct: 106 NCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQ 165

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
            N ++Y TLINGLC+TG T     L  ++       G   KP+ V Y+TII  LCK   +
Sbjct: 166 LNQVSYRTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIIHSLCKNKLL 219

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             A  L+ +M  + I+P+VVTYN+L++G C      EA  L  EM  + + P V TFN +
Sbjct: 220 GDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTL 279

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D L K  KM  A  +L +M++  ++P+  TYN+L+DG+  + K+  A+ +F SM   G 
Sbjct: 280 IDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGV 339

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +  +Y  +I+G CK K V+EA+SL+ EM  K + P +VTY +L  GL + H +E A+ 
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  +M+  G+  D  +YT  +D LCK G +  A E F+ L +    L++Q YN +I+GLC
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD----------- 512
           K+     A +L   +     +P+ +T+  +I  L    + DKA  +  +           
Sbjct: 460 KADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARK 519

Query: 513 ------------MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
                       M +    PDV+T+  L+ G+  +NE      + + M +  V P+    
Sbjct: 520 VRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCY 579

Query: 561 SIVVDLLVKNEISLKSLPSF 580
           +I++D L K +   +++  F
Sbjct: 580 TIMIDGLCKKKTVDEAMSLF 599



 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 185/564 (32%), Positives = 277/564 (49%), Gaps = 72/564 (12%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           L  H   P V  +N ++ SL KNK         + +   G+ PN+ TYN L+  FC +G 
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGH 253

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC-EPNVITYN 170
           +   F     +      P+  TFN+LI  L  E + M+AA +   +    C +P+V+TYN
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK-MKAAKIVLAVMMKACIKPDVVTYN 312

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           +LI+G         A  +F  MA      GV   PN  TY+T+IDGLCKE  VD+A +LF
Sbjct: 313 SLIDGYFFLNKVKNAKYVFYSMAQS----GVT--PNVRTYTTMIDGLCKEKMVDEAMSLF 366

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +MK +N+ PD+VTY SLI GLC  +    A  L  +M +QG+QP V ++ +++D LCK 
Sbjct: 367 EEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            +++ A      ++ +G   N  TYN +++G C       A +L   ME  GC  D +++
Sbjct: 427 GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITF 486

Query: 351 NILINGYCKNKEVEEALSLYREMVSKG-----------------------IKPTVVTYNT 387
             +I    +  E ++A  + REM+++G                       IKP VVTY T
Sbjct: 487 KTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGT 546

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF------- 440
           L  G F +++++HA  +F  M + GV  + + YT  IDGLCK   + EA+ LF       
Sbjct: 547 LMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKN 606

Query: 441 ----------------------RTLRILK------CELDIQAYNCLIDGLCKSGRLKFAW 472
                                 R + +LK       + D+ +Y  L+DGLCKSGRL+ A 
Sbjct: 607 MFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAK 666

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           E+F  L       NV  Y  MI  LC  G  D+A DL   ME+    PD +TFD++I   
Sbjct: 667 EIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWAL 726

Query: 533 IRINEPSKVNELLHKMKEKKVMPD 556
              +E  K  ++L +M  + +M +
Sbjct: 727 FEKDENDKAEKILXEMIARGLMKE 750



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 169/554 (30%), Positives = 259/554 (46%), Gaps = 44/554 (7%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNILI 103
           AF +   +L+    P  ++  N L+  L       K  ++  ++ A G   N  +Y  LI
Sbjct: 117 AFSVLANILKRGYHPNAIT-LNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLI 175

Query: 104 NCFCKIGRVSLGFIAFGRILRS----CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N  CK G       A  R+LR        P+   +N++I  L     + +A  L++++  
Sbjct: 176 NGLCKTGETK----AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIV 231

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  PNV+TYN L+ G C  GH   A +L  EM   N        P+  T++T+ID L K
Sbjct: 232 KGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN------INPDVCTFNTLIDALGK 285

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG +  AK +   M    I PDVVTYNSLI G    N    AK +F  M   GV P+V T
Sbjct: 286 EGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRT 345

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +  ++D LCK + +DEA  L + M  + + P+  TY +L+DG C    + RA  L   M+
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK 405

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G + D  SY IL++  CK   +E A   ++ ++ KG    V TYN +  GL +     
Sbjct: 406 EQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFG 465

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNG-----------YIIEAVELFRTLRILKC 448
            A+ L  +M+  G   D  T+ T I  L +              I   ++  R +R+ + 
Sbjct: 466 EAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA 525

Query: 449 EL------------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           ++            D+  Y  L+DG      LK A  +F S+    + PNV  Y IMI G
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LC    +D+A  LF +M+     P+++T+  LI    + +   +   LL +MKE  + PD
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645

Query: 557 ASIVSIVVDLLVKN 570
               +I++D L K+
Sbjct: 646 VYSYTILLDGLCKS 659



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 190/392 (48%), Gaps = 24/392 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  +F+ M +     P + ++  L+  L KN H +       ++   G+ P++Y+Y I
Sbjct: 360 DEAMSLFEEM-KYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++  CK GR+      F R+L   +  N  T+N +I GL       EA  L +K++  G
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVV----------------CK 204
           C P+ IT+ T+I  L        A  +  EM A G  E   V                 K
Sbjct: 479 CMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIK 538

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ VTY T++DG      +  AK +F  M    + P+V  Y  +I GLC     +EA  L
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F EM  + + P++VT+  ++D LCKN  ++ A  LL  M + G++P+  +Y  L+DG C 
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G++  A+E+F  +   G   +   Y  +IN  CK    +EAL L  +M  KG  P  VT
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVT 718

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           ++ +   LFE  + + A K+  EM   G+  +
Sbjct: 719 FDIIIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 171/426 (40%), Positives = 261/426 (61%), Gaps = 13/426 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A   F++M+  HP P  V  F+ LL++L + KHY T      R+    +  +++ +NIL
Sbjct: 67  DALFSFNHMIHKHPLPCIVE-FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNIL 125

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           INCF ++ RV   F   G+I++  F P+A TF+SLI GL  E +   A   F ++ A G 
Sbjct: 126 INCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGY 185

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           +PN+ TYNT+I G C+ G T +A+ L ++M    G      +P+ V Y+TIIDGLCK+  
Sbjct: 186 QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG------RPDIVIYNTIIDGLCKDRL 239

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V +A  +F ++K + + PDV TY+ L+HGLC+++   EA  LF EMM   + P VVTFN+
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D+LCK   + EA  ++ +M+++GV PN  TYN+LM+G+CL  K+  A  +F +M + G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  + VSYNILINGYCK + ++EA  L+ EM  +G+ P    YNTL  GL +  +   A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +LF +MQ  G + D  T T  +D LCK GY+  A+ LFR ++    + ++  Y+ LI  +
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 463 CKSGRL 468
            KSG++
Sbjct: 480 YKSGKI 485



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 212/407 (52%), Gaps = 6/407 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P ++ ++ L++ L R  H    L+L + +     E+ +  + +   ++ +I+   +   V
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRI-----EL-LRIERDVFHFNILINCFSRLQRV 135

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A ++  ++      PD VT++SLI+GLC  + +  A   F EM+  G QP++ T+N I
Sbjct: 136 DFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTI 195

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   CK  K   A  LL  M + G RP+   YNT++DG C    ++ A ++F  ++  G 
Sbjct: 196 IKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGV 255

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + D  +Y+IL++G C + + EEA +L+ EM+S  I P VVT+N L   L +   +  A  
Sbjct: 256 RPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQG 315

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +   M   GV  +  TY + ++G C    + EA  +F  +    C  ++ +YN LI+G C
Sbjct: 316 IIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYC 375

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K+ R+  A ELF  +    L+PN   YN +I GLC  G+  +AR+LF DM+    +PD++
Sbjct: 376 KAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLV 435

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           T  +L+    ++        L   M++  + P+     I++  + K+
Sbjct: 436 TCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKS 482



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 12/272 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N ++  L K++     L+        G+ P+++TY+IL++  C   +       
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++     P+  TFN L+  L  E  + EA  +   +   G EPN  TYN+L+NG C 
Sbjct: 282 FNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCL 341

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  +F+ M      I   C PN V+Y+ +I+G CK   +D+A+ LF +M    +
Sbjct: 342 QNKVFEARMVFDAM------ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+   YN+LI GLC A    EA+ LF +M  QG  P +VT  +++D LCK   +D A R
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALR 455

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           L   M    ++PN  TY+ L+      GKI R
Sbjct: 456 LFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 132/269 (49%)

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C    +++A    + M+ +   P    ++ L+     +        L   +E +  + D 
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
             +NILIN + + + V+ A S+  +++  G +P  VT+++L  GL    +   A++ FDE
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G   +  TY T I G CK G    AV L + +       DI  YN +IDGLCK   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A ++F  +    + P+V TY+I++ GLCN  Q ++A  LF +M      PDV+TF++
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L+    +    S+   ++  M EK V P+
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPN 328



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 89/183 (48%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E AL  F+ M           +   +  L +  +    + L + + +L+ E D+  +N 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+   +  R+ FA+ +   +      P+ VT++ +I GLC + +  +A + F +M  + 
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             P++ T++ +I GF +I + +    LL KM +    PD  I + ++D L K+ +  ++L
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 578 PSF 580
             F
Sbjct: 245 DIF 247


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  330 bits (847), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 185/470 (39%), Positives = 269/470 (57%), Gaps = 13/470 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A   F+ ML M P PPP   FN +L+SL  NKHY T      +    G+ P+L T +ILI
Sbjct: 41  AVASFNLMLLMRP-PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILI 99

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           NCFC    ++L F  F  IL+  F PNA T N+LIKGL     I +A     +L A G +
Sbjct: 100 NCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQ 159

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
            + ++Y TLINGLC+TG T     L  ++       G   KP+ V Y+TII+ LCK   +
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNKLL 213

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             A  ++ +M  + I+PDVVTY +LIHG C      EA  L  EM  + + P+V TFN++
Sbjct: 214 GDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNIL 273

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D L K  KM EA  LL +M++  ++P+  TYN+L+DG+ L+ ++  A+ +F SM   G 
Sbjct: 274 IDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGV 333

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D   Y  +ING CK K V+EA+SL+ EM  K + P +VTYN+L  GL + H +E A+ 
Sbjct: 334 TPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIA 393

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L   M+  G+  D  +YT  +DGLCK+G + +A E+F+ L      L++ AY  LI+ LC
Sbjct: 394 LCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLC 453

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           K+G    A +L   +     +P+ VT++I+I+ L    + DKA  +  +M
Sbjct: 454 KAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 228/443 (51%), Gaps = 6/443 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P    FN+++  L          +LF + +  G  P++ T + LIN  C   H  +A ++
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
           F  +            PN +T +T+I GLC  G + KA     Q+  +    D V+Y +L
Sbjct: 115 FANILKRGFH------PNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTL 168

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I+GLC   +     RL  ++    V+P VV +N I++ LCKN+ + +A  +   M+ +G+
Sbjct: 169 INGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 228

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  TY TL+ GFC+MG +  A  L   M+      +  ++NILI+   K  +++EA  
Sbjct: 229 SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKI 288

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L   M+   IKP V TYN+L  G F + +V+HA  +F  M + GV  D + YT  I+GLC
Sbjct: 289 LLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K   + EA+ LF  ++      DI  YN LIDGLCK+  L+ A  L   +    + P+V 
Sbjct: 349 KTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVY 408

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +Y I++ GLC  G+++ A+++F  +       +V  + +LI+   +     +  +L  KM
Sbjct: 409 SYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKM 468

Query: 549 KEKKVMPDASIVSIVVDLLVKNE 571
           ++K  MPDA    I++  L + +
Sbjct: 469 EDKGCMPDAVTFDIIIRALFEKD 491



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 193/411 (46%), Gaps = 60/411 (14%)

Query: 50  AFCIFDYMLR--MHPSPPPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNI 101
           AF +F  +L+   HP+     + N L+  L       K  ++  +L A G   +  +Y  
Sbjct: 111 AFSVFANILKRGFHPN---AITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGT 167

Query: 102 LINCFCKIGRVSLGFIAFGRILRS----CFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           LIN  CK G       A  R+LR        P+   +N++I  L     + +A  +++++
Sbjct: 168 LINGLCKTGETK----AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 223

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+V+TY TLI+G C  GH   A +L  EM   N        PN  T++ +ID L
Sbjct: 224 IVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN------INPNVCTFNILIDAL 277

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLI---------------------------- 249
            KEG + +AK L   M    I PDV TYNSLI                            
Sbjct: 278 SKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDV 337

Query: 250 -------HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
                  +GLC     +EA  LF EM  + + P +VT+N ++D LCKN  ++ A  L   
Sbjct: 338 QCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKR 397

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M ++G++P+  +Y  L+DG C  G++  A+E+F  + + G   +  +Y +LIN  CK   
Sbjct: 398 MKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGF 457

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
            +EAL L  +M  KG  P  VT++ +   LFE  + + A K+  EM   G+
Sbjct: 458 FDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 151/306 (49%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P    FN I+  L  N+       L       G+ P+ CT + L++ FC    I  A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F ++   G   + ++ N LI G C   E+++AL  + ++V++G +   V+Y TL  GL +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             + +   +L  +++   V  D   Y T I+ LCKN  + +A +++  + +     D+  
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y  LI G C  G LK A+ L   +    + PNV T+NI+I  L  +G+M +A+ L   M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           +    PDV T++ LI G+  ++E      + + M ++ V PD    + +++ L K ++  
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 575 KSLPSF 580
           +++  F
Sbjct: 355 EAMSLF 360


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 181/516 (35%), Positives = 284/516 (55%), Gaps = 48/516 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F+ M+ M+P P  ++ FN LLA+L + KHYD+      ++   G+  ++YT  I
Sbjct: 86  DDALAYFNQMVHMNPFPC-ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINC C +  V LGF   G+I +  F P+  TFN+LI GL  E RI+EA      + + G
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P V T+  ++NGLC+ G T  A+   ++M   +      C+P  V+YS IID LCK  
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELD------CEPEVVSYSIIIDSLCKNR 258

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++A  LF  M+   I+P VVTYNSLI+G+C++  W +A  LF EM++  ++P VVTF+
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFS 318

Query: 282 VIMDELCK-----------------------------------NRKMDEASRLLDLMVQR 306
           +++D LCK                                   +    E+S LL+ M+ R
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            +RP+  T++  +D FC  G ++ A+ +   M   G + + V+YN L++GYC + +++EA
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEA 438

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             ++  MV+KG  P V++YN L  G  +  +++ A +LFDEM   G+  ++ T+TT I G
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISG 498

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC+ G    A ELF+ +    C  D+  Y+ L+ G CK G L  A  LF +L    L PN
Sbjct: 499 LCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPN 558

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            V   I++ G+C  G+++ A++LF  +      PDV
Sbjct: 559 HVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 218/428 (50%), Gaps = 6/428 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P    FN L+  L          +++ K++ FG   +V T   LIN LC      +  ++
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             ++     ++G   KP+ +T++T+I+GLC EG + +A      +      P V T+  +
Sbjct: 162 LGKIF----KLGF--KPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMI 215

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           ++GLC     + A     +M++   +P VV++++I+D LCKNR ++EA  L   M   G+
Sbjct: 216 VNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGI 275

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P   TYN+L+ G C  G+  +A  LF  M     K D V+++IL++  CK   V EALS
Sbjct: 276 SPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALS 335

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++ +M+   ++P +VTY++L  G+ +    + +  L +EM    +  D  T++ ++D  C
Sbjct: 336 VFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFC 395

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G + EA  +   +       ++  YN L+DG C   ++  A ++F  + +    P+V+
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +YNI+I+G C   ++D+A+ LF +M      P+ IT   LI G  +   P    EL  KM
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515

Query: 549 KEKKVMPD 556
                 PD
Sbjct: 516 GSHGCPPD 523



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 204/409 (49%), Gaps = 43/409 (10%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL  F +M + N        P    ++ ++  L +    D   +++ +M+   ++  V T
Sbjct: 88  ALAYFNQMVHMNPF------PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYT 141

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
              LI+ LCH +       +  ++   G +PS++TFN +++ LC   ++ EA   LD ++
Sbjct: 142 LTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIM 201

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            RG +P   T+  +++G C +GK + A      M  + C+ + VSY+I+I+  CKN+ V 
Sbjct: 202 SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVN 261

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+ L+  M S GI PTVVTYN+L  G+    Q + A  LF EM    +  D  T++  +
Sbjct: 262 EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILV 321

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA------------- 471
           D LCK G ++EA+ +F  +  +  E DI  Y+ LI G+CKS   K +             
Sbjct: 322 DALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR 381

Query: 472 --------W-ELFCS--------------LPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
                   W ++FC               +  G L PNVVTYN ++ G C   QMD+AR 
Sbjct: 382 PDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG-LRPNVVTYNSLMDGYCLHSQMDEARK 440

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           +F  M     APDV+++++LI G+ +     +  +L  +M  K + P++
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNS 489



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 137/312 (43%), Gaps = 35/312 (11%)

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D+A    + MV     P    +N L+     M   +    ++  ME  G      +  IL
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           IN  C    V    S+  ++   G KP+++T+NTL  GL    ++  A++  D +   G 
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
                T+T  ++GLCK G    A+   + +  L CE ++ +Y+ +ID LCK+  +  A +
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM------ 527
           LF  +    + P VVTYN +I G+CN GQ  +A  LF +M E    PDV+TF +      
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 528 -----------------------------LIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
                                        LIHG  + +   + + LL++M  + + PD  
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 559 IVSIVVDLLVKN 570
             SI VD+  K 
Sbjct: 386 TFSIWVDVFCKK 397


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 164/416 (39%), Positives = 256/416 (61%), Gaps = 6/416 (1%)

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           AL  ++ A GC+P+++TY  ++NGLC+ G T +A NL  +M  G  E      P  + Y+
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVLIYN 55

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           TIIDGLCK   +D A  LF +M+ + I P+VVTY+SLI  LC+   W++A RL  +M+++
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P V TF+ ++D   K  K+ EA +L D MV+R + P+  TY++L++GFC+  +++ A
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +++F  M S  C  D V+YN LI G+CK K VEE + ++REM  +G+    VTYN L  G
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           LF+    + A ++F EM  DGV  +  TY T +DGLCKNG + +A+ +F  L+  K E  
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN +I+G+CK+G+++  W+LFC+L    + P+VV YN MI G C  G  ++A  LF 
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +M+E+   P+   ++ LI   +R  +     EL+ +M+      DAS + +V ++L
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 225/428 (52%), Gaps = 10/428 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ A G  P+L TY +++N  CK G   L F    ++ +    P    +N++I GL    
Sbjct: 6   RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            + +A  LF +++  G  PNV+TY++LI+ LC  G    A  L  +M      I     P
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM------IERKINP 119

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  T+S +ID   KEG + +A+ L+ +M   +I+P +VTY+SLI+G C  +  +EAK++F
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+ +   P VVT+N ++   CK ++++E   +   M QRG+  N  TYN L+ G    
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  + A+E+F  M S G   + ++YN L++G CKN ++E+A+ ++  +    ++PT+ TY
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  G+ +  +VE    LF  +   GV  D   Y T I G C+ G   EA  LF+ ++ 
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                +   YN LI    + G  + + EL   +       +  T   ++  + +DG++DK
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDK 418

Query: 506 ARDLFLDM 513
           +   FLDM
Sbjct: 419 S---FLDM 423



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 162/306 (52%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L   M+ +G QP +VT+ V+++ LCK    D A  LL+ M Q  + P    YNT++DG C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
               ++ A  LF  ME+ G + + V+Y+ LI+  C      +A  L  +M+ + I P V 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T++ L     +  ++  A KL+DEM +  +     TY++ I+G C +  + EA ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C  D+  YN LI G CK  R++   E+F  +    LV N VTYNI+IQGL   G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A+++F +M  +   P+++T++ L+ G  +  +  K   +   ++  K+ P     +I+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 564 VDLLVK 569
           ++ + K
Sbjct: 303 IEGMCK 308



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 151/288 (52%)

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+D MV +G +P+  TY  +++G C  G  + A  L   ME    +   + YN +I+G C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K K +++AL+L++EM +KGI+P VVTY++L   L    +   A +L  +M    +  D  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T++  ID   K G ++EA +L+  +     +  I  Y+ LI+G C   RL  A ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+VVTYN +I+G C   ++++  ++F +M +     + +T+++LI G  +  + 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
               E+  +M    V P+    + ++D L KN    K++  F   +R 
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 110/226 (48%)

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           ++L   MV+KG +P +VTY  +  GL +    + A  L ++M++  +      Y T IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK  ++ +A+ LF+ +       ++  Y+ LI  LC  GR   A  L   +    + P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V T++ +I     +G++ +A  L+ +M + +  P ++T+  LI+GF   +   +  ++  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            M  K   PD    + ++    K +   + +  F    ++G VG +
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++NIL+  L +    D        + + G+ PN+ TYN L++  CK G++    + F  +
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
            RS   P   T+N +I+G+    ++ +   LF  L   G +P+V+ YNT+I+G CR G  
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 347

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  LF+EM     E G +  PN+  Y+T+I    ++G  + +  L  +M+      D 
Sbjct: 348 EEADALFKEMK----EDGTL--PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 401

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMM 269
            T   L+  + H    +++   F++M+
Sbjct: 402 STI-GLVTNMLHDGRLDKS---FLDML 424



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP + ++N LL  L KN   +        L  + + P +YTYNI+I   CK G+V  G+ 
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  +      P+   +N++I G   +    EA ALF ++K  G  PN   YNTLI    
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377

Query: 178 RTGHTMIALNLFEEM 192
           R G    +  L +EM
Sbjct: 378 RDGDREASAELIKEM 392


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 176/496 (35%), Positives = 275/496 (55%), Gaps = 13/496 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  +F++++ M P P  V  FN ++ S+ K KH    ++        G+ P+++T +I
Sbjct: 66  DDAVTLFNHLINMQPLPS-VIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            INC+C +G +   F   G +L+  + PN  T  +++KGL     + +A      + A G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              + + Y TLINGLC+ G ++ A  L +EM       G V KPN V Y+ IID  CK+ 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEME------GQVVKPNIVIYNMIIDSFCKDE 238

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              KA+ L+L++ D  I+PD++TY SLI G C    W E K+L  EM+++ + P+V TFN
Sbjct: 239 LTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFN 298

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++D  C+  KM EA  + +LMV+RG +P+  T+NTL+ G CL G +  A +LF ++   
Sbjct: 299 VLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFER 358

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  SY ILI GYCK K ++EA+SL+ EM  K +   +V Y++L  GL +  ++ +A
Sbjct: 359 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 418

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +LF  +  DG   +  TY   ID  CK   I   +ELF+ +        +  YN LI+G
Sbjct: 419 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            CKS R++ A  L   +    L P+ +TYN +  GLC  G++  A +LF  M       D
Sbjct: 479 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVD 538

Query: 522 VITFDMLIHGFIRINE 537
           V T+++L+  F +  +
Sbjct: 539 VATYNVLLDAFCKAQD 554



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/499 (31%), Positives = 249/499 (49%), Gaps = 36/499 (7%)

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +++ C     R+   F  F R    C   NA   +S        + I +A  LF  L   
Sbjct: 26  VVMLCIATTTRLRYAFHKFLRFFSHCPKQNAKILSSF-------NGIDDAVTLFNHLINM 78

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN------------------GE---- 198
              P+VI +NT+I  + +  H  +A++L ++M                      GE    
Sbjct: 79  QPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFA 138

Query: 199 ---IGVVCK----PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
              +G+V K    PN +T +T++ GLC  G V KA      +  + +  D V Y +LI+G
Sbjct: 139 FSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLING 198

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC      +A +L  EM  Q V+P++V +N+I+D  CK+    +A  L   +V  G+ P+
Sbjct: 199 LCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPD 258

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TY +L+ GFC  G+    ++L   M +     +  ++N+LI+ +C+  ++ EA  ++ 
Sbjct: 259 ILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFN 318

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            MV +G +P +VT+NTL  G      V  A KLFD +   G+  D  +YT  I G CK  
Sbjct: 319 LMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCK 378

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            I EAV LF  +R     LDI  Y+ LIDGLCKSGR+ +AWELF ++ +    PNV+TYN
Sbjct: 379 RIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYN 438

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           I+I   C    +D   +LF  M      P V+T+++LI+G+ +     +   LL  M+ K
Sbjct: 439 ILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK 498

Query: 552 KVMPDASIVSIVVDLLVKN 570
            + PD+   + + D L K+
Sbjct: 499 NLAPDSITYNSLFDGLCKS 517



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 155/270 (57%), Gaps = 6/270 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+YT+N+LI+ FC+ G++      F  +++    P+  TFN+LI G      ++EA  L
Sbjct: 292 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 351

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +   G  P+V +Y  LI G C+      A++LF EM   N  + +V       YS++
Sbjct: 352 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIV------LYSSL 405

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGLCK G +  A  LF  + ++   P+V+TYN LI   C   D +    LF  M  +G+
Sbjct: 406 IDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGL 465

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+V+T+N++++  CK++++ EA  LL +M  + + P++ TYN+L DG C  G+I+ A E
Sbjct: 466 TPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWE 525

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           LF  M   G   D  +YN+L++ +CK ++V
Sbjct: 526 LFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 132/261 (50%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I+ A  LF  + +M      + +N +I    K K    A+SL ++MV KG+ P++ T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
                  + ++  A  +   + + G   +  T TT + GLC NG + +A++    +    
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
             LD   Y  LI+GLCK GR   A++L   +   V+ PN+V YN++I   C D    KAR
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           DL+L + +    PD++T+  LI GF R  +  +V +L+ +M  K + P+    ++++D  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 568 VKNEISLKSLPSFLVQERQGE 588
            +    +++   F +  ++G+
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQ 325


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 189/558 (33%), Positives = 303/558 (54%), Gaps = 29/558 (5%)

Query: 31  HFRDLT------TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
           H R+L        R G++ +   ++A  +FD +L +H  P  V + N LL+ +++ K   
Sbjct: 5   HARELERAAIGRARSGNLGL---HDALKLFDELL-LHARPASVRALNQLLSVVSRAKCSS 60

Query: 85  TRLNATGLF------------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           +   A   F            P+  TY+I+I CFC+IGR+ LGF AFG IL++ +  +  
Sbjct: 61  SSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDI 120

Query: 133 TFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
             N L+KGL    R+ EA   L  ++   GC   V++YNTL+ GLC       A  L   
Sbjct: 121 VVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHM 180

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M +G       C P+ V+Y+ +I+G   EG VDKA +LFL+M    ++PDVVTYN++I G
Sbjct: 181 MVDGQDS---SCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDG 234

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC A + + A+ +F +M+++GV+P+ VT+N I+D LCK +++D A  +   MV +GV+P+
Sbjct: 235 LCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPS 294

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TYNT++DG C    ++RAE +F  M   G K D V+YN +I+G CK + +++A  +++
Sbjct: 295 NVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQ 354

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           +M+ KG+KP  +TY  +  GL +   V+ A  +F +M   GV  +  TY   I G    G
Sbjct: 355 QMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTG 414

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
              E V+  + +     E D+  Y  L+D LCK+G+   A  LF S+    + P+V  Y 
Sbjct: 415 QWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYG 474

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           IM+ G    G + +  DL   M  N  +P+   F+ +I  + +     +V  +  KMK++
Sbjct: 475 IMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ 534

Query: 552 KVMPDASIVSIVVDLLVK 569
            + P+      ++D L K
Sbjct: 535 GLSPNVVTYGTLIDALCK 552



 Score =  314 bits (805), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 194/603 (32%), Positives = 302/603 (50%), Gaps = 73/603 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           + A  +F  M+     P  V+ +N ++  L K +  D       ++   G+ P+  TY I
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVT-YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+  CK   V      F +++     PN  T+N LI G  +  +  E      ++ A  
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEE---------------MANGNGEIG------ 200
            EP+V TY  L++ LC+ G    A +LF+                M +G G+ G      
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 201 --------------------VVC-----------------------KPNTVTYSTIIDGL 217
                               V+C                        PN VTY T+ID L
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G VD A   F QM +E + P+ V +NSL++GLC  + W + + LF+EM++QG++P +
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           V FN ++  LCK  ++ EA RL+D MV  G++P+  +YNTL+DG C   +++ A +L   
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M S G K + VSYN L++GYCK   ++ A  L+REM+ KG+ P V TYNT+  GLF   +
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
              A +L+  M +        TY+  +DG CKN    EA ++F++L  +  +LDI  +N 
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +IDGL K GR + A +LF ++P   LVP+VVTY ++ + L  +G +++   LF  ME++ 
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS--LK 575
            AP+    + LI   +   E  +    L K+ EK    +AS  S+++ L  + E     K
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAK 910

Query: 576 SLP 578
           SLP
Sbjct: 911 SLP 913



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 168/564 (29%), Positives = 284/564 (50%), Gaps = 51/564 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++A+ +F   L M  SP  V ++N ++  L K +  D       ++   G+ PN  TYN 
Sbjct: 210 DKAYSLF---LEMGVSPD-VVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNT 265

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+  CK   V +    F +++     P+  T+N++I GL     +  A  +F ++   G
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG 325

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+ +TYNT+I+GLC+      A  +F++M +     GV  KP+ +TY+ IIDGLCK  
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK----GV--KPDNLTYTIIIDGLCKAQ 379

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A+ +F QM D+ + P+  TYN LIHG      W E  +   EM    ++P V T+ 
Sbjct: 380 SVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYG 439

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL------- 334
           +++D LCKN K +EA  L D M+++G++P+   Y  ++ G+   G ++   +L       
Sbjct: 440 LLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN 499

Query: 335 ----------------------------FGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
                                       F  M+  G   + V+Y  LI+  CK   V++A
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           +  + +M+++G+ P  V +N+L  GL  + + E   +LF EM   G+  D   + T +  
Sbjct: 560 VLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G ++EA  L  ++  +  + D+ +YN LIDG C + R+  A +L   +    L PN
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +V+YN ++ G C  G++D A  LF +M      P V T++ +++G  R    S+  EL  
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYV 739

Query: 547 KMKEKKVMPDASIVSIVVDLLVKN 570
            M + + +      SI++D   KN
Sbjct: 740 NMIKSRKLWSICTYSIILDGFCKN 763



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 266/508 (52%), Gaps = 18/508 (3%)

Query: 67  VSSFNILLASLAKNK---------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           V S+N LL  L   +         H       +   P++ +YNI+IN F   G+V   + 
Sbjct: 155 VVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYS 214

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F   L    +P+  T+N++I GL     +  A  +F ++   G +PN +TYNT+I+GLC
Sbjct: 215 LF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLC 271

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +     +A  +F++M +     GV  KP+ VTY+TIIDGLCK   VD+A+ +F QM D  
Sbjct: 272 KAQEVDMAEGVFQKMVDK----GV--KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG 325

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PD VTYN++I GLC A   ++A+ +F +M+D+GV+P  +T+ +I+D LCK + +D A 
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +   M+ +GV+PN  TYN L+ G+   G+     +    M +   + D  +Y +L++  
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CKN +  EA SL+  M+ KGIKP+V  Y  +  G  +   +     L + M  +G++ + 
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNH 505

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
           R + T I    K   I E + +F  ++      ++  Y  LID LCK GR+  A   F  
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           + +  + PN V +N ++ GLC   + +K  +LFL+M      PD++ F+ ++    +   
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +   L+  M    + PD    + ++D
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLID 653



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 222/438 (50%), Gaps = 19/438 (4%)

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR---TGHTMIALNLFEEMANGN 196
           GLH      +A  LF +L       +V   N L++ + R   +  + +A++ F  M    
Sbjct: 23  GLH------DALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLR-- 74

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            +      P+  TYS +I   C+ G ++   A F  +       D +  N L+ GLC   
Sbjct: 75  -DCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTK 133

Query: 257 DWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ---RGVRPNA 312
              EA  + +  M + G +  VV++N ++  LC  R+ +EA  LL +MV        P+ 
Sbjct: 134 RVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDV 193

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            +YN +++GF   G++++A  LF     MG   D V+YN +I+G CK +EV+ A  ++++
Sbjct: 194 VSYNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           MV KG+KP  VTYNT+  GL +  +V+ A  +F +M   GV     TY T IDGLCK   
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A  +F+ +     + D   YN +IDGLCK+  +  A  +F  +    + P+ +TY I
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I GLC    +D+A  +F  M +    P+  T++ LIHG++   +  +V + + +M    
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 553 VMPDASIVSIVVDLLVKN 570
           + PD     +++D L KN
Sbjct: 431 LEPDVFTYGLLLDYLCKN 448



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 11/152 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EAF IF  +  M      ++ FNI++  L K    +  ++      A GL P++ TY +
Sbjct: 767 DEAFKIFQSLCSMDLQLDIIT-FNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRL 825

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL--KA 159
           +     + G +      F  + +S   PN+   N+LI+ L     I  A A  +KL  K 
Sbjct: 826 IAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKN 885

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
           F  E +  T + LI+   R  +   A +L E+
Sbjct: 886 FSLEAS--TTSMLISLFSREEYQQHAKSLPEK 915


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 189/569 (33%), Positives = 299/569 (52%), Gaps = 56/569 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P ++TY 
Sbjct: 38  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI C C+ GR+ LGF A G +++  F  +A TF  L+KGL A+ R  +A  +   ++  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC P+V +YN L+ GLC    +  AL L   MA+  G       P+ V+Y+T+++G  K
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGG---GSPPDVVSYNTVLNGFFK 213

Query: 220 EGF--------VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           EG         +DKA  +   M    + PD +TYNS++HG C +    EA     +M   
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEA----------------------------------- 296
           GV+P+VVT++ +M+ LCKN +  EA                                   
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            +L DLMV+ GV+P+  TYNTL+DG CL GK++ A +L  SM S+G K D V+Y  LING
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 393

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           YC+   +++AL+L++EMVS G+ P ++TYN +  GLF   +   A +L+  + + G   +
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 453

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY   + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR+  A +LF 
Sbjct: 454 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFA 513

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           +     LVP+V TY++M + L   G +++  DLFL MEEN  + D    + ++   ++  
Sbjct: 514 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 573

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           + ++    L  + EK    +AS  S +++
Sbjct: 574 DITRAGTYLFMIDEKHFSLEASTASFLLE 602



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 212/409 (51%), Gaps = 17/409 (4%)

Query: 185 ALNLFEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           A++ +  MA  G G++     P   TY+ +I   C+ G +D   A    +  +    D +
Sbjct: 73  AVSRYNRMARAGAGKV----TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAI 128

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           T+  L+ GLC     ++A  + +  M + G  P V ++N ++  LC   +  EA  LL +
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 303 MVQR---GVRPNACTYNTLMDGFCLMG--------KINRAEELFGSMESMGCKHDDVSYN 351
           M      G  P+  +YNT+++GF   G         +++A E+  +M   G   D ++YN
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYN 248

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +++GYC + + +EA+   ++M S G++P VVTY++L   L +  +   A K+FD M + 
Sbjct: 249 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 308

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+  D  TY T + G CK G +IE+ +LF  +  +  + DI  YN LIDG C +G++  A
Sbjct: 309 GLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 368

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +L  S+    + P++VTY  +I G C   +MD A  LF +M  +  +P++IT+++++ G
Sbjct: 369 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
                  +   EL   + +     + S  +I++  L KN ++ ++L  F
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 477



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 15/237 (6%)

Query: 366 ALSLYREMVSKG---IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           A+S Y  M   G   + PTV TY  L        +++        + + G   D  T+T 
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 423 FIDGLCKNGYIIEAVEL-FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH- 480
            + GLC +    +A+++  R +  L C  D+ +YN L+ GLC   R + A EL   +   
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 481 --GVLVPNVVTYNIMIQGLCNDG--------QMDKARDLFLDMEENAAAPDVITFDMLIH 530
             G   P+VV+YN ++ G   +G         MDKA ++   M +N   PD +T++ ++H
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 252

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           G+    +P +    L KM+   V P+    S +++ L KN  S ++   F    ++G
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 181/566 (31%), Positives = 311/566 (54%), Gaps = 38/566 (6%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------------ 85
           +EG+++     +A+ +F  ML     PP + ++N ++  L K +  D             
Sbjct: 151 KEGEVD-----KAYTLFHEMLG-QGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204

Query: 86  ----------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFN 135
                     +++  GL P++ TY++LI+ +CKIGR +     F  ++R    P+A T+ 
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           +L+ G   +  +++   L   +   G       +N LI    +      A+  F EM   
Sbjct: 265 TLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQK 324

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                    PN VTY+T+ID LCK G V+ A + F QM  E ++PD++T+ SLIHGLC  
Sbjct: 325 G------FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTI 378

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
            +W + ++L  EM+++G+ P+ +  N IMD LCK  ++ EA    D ++  GV+P+  +Y
Sbjct: 379 GEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSY 438

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             L+DG+CL GK++ + +L G M S+G + D+V+Y+ L+NGYCKN  V++AL+LYREM S
Sbjct: 439 TILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFS 498

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           K +KP  +TYN +  GLF   +V  A + + ++   G+     TY   + GLC+N ++ E
Sbjct: 499 KDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDE 558

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMI 494
           A+ +F+ LR  + +L+++ +N +I GL K GR+  A  LF + LP G LVP+ + Y +MI
Sbjct: 559 ALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSG-LVPDAIIYGLMI 617

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           Q    +G ++++ +LFL ME+N    +  T + ++   +   +  +    L K+ EK+  
Sbjct: 618 QSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYS 677

Query: 555 PDASIVSIVVDLLV--KNEISLKSLP 578
            +AS   +++ ++   K +  +K LP
Sbjct: 678 VEASTAVLLISIVSERKYQKEVKFLP 703



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/532 (30%), Positives = 252/532 (47%), Gaps = 67/532 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLY----------- 97
           +A  +FD +L    S   V +FN +L  +A      ++ +   L  +L+           
Sbjct: 32  DALNLFDELLPRARSAS-VHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKL 90

Query: 98  -----TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
                T+ ILI CFC +G +                            L  ESR   AA 
Sbjct: 91  ATDACTFGILIRCFCNVGLLDFA-------------------------LEEESRGSRAAV 125

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
                  + C PNV++YN +INGL + G    A  LF EM      +G    PN VTY++
Sbjct: 126 HMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEM------LGQGFPPNIVTYNS 179

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDGLCK   +DKA+A+  QM D+                       EA RL  +M   G
Sbjct: 180 VIDGLCKAQAMDKAEAVLQQMFDK-------------------GQLEEAVRLLKKMSGGG 220

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           +QP VVT+++++D  CK  +  EA  + D MV+RG  P+A TY TL+ G+   G +    
Sbjct: 221 LQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMH 280

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M   G   +D  +NILI  Y KN+ +++A++ + EM  KG  P VVTY T+   L
Sbjct: 281 DLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDIL 340

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +VE A+  F +M  +G++ D  T+T+ I GLC  G   +  +L   +       + 
Sbjct: 341 CKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNA 400

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
              N ++D LCK GR+  A + F  + H  + P+VV+Y I+I G C DG+MD++  L   
Sbjct: 401 IFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGR 460

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           M      PD +T+  L++G+ +         L  +M  K V P+A   +I++
Sbjct: 461 MVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIIL 512


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 178/456 (39%), Positives = 262/456 (57%), Gaps = 13/456 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            TP   TFN+LI GL  E R++EAAAL  K+   G   +V+TY T++NG+C+ G T  AL
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           NL  +M   +       KP+ V YS IID LCK+G    A+ LF +M ++ I P+V TYN
Sbjct: 66  NLLSKMEETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 119

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            +I G C    W++A+RL  +M+++ + P V+TFN ++    K  K+ EA +L D M+ R
Sbjct: 120 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            + P+  TYN+++ GFC   + + A+ +F  M S     D V++N +I+ YC+ K V+E 
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 235

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + L RE+  +G+     TYNTL  G  E+  +  A  LF EM   GV  DT T    + G
Sbjct: 236 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP-HGVLVP 485
            C+N  + EA+ELF  +++ K +LD  AYN +I G+CK  ++  AW+LFCSLP HGV  P
Sbjct: 296 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV-EP 354

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +V TYN+MI G C    +  A  LF  M++N   PD  T++ LI G ++  E  K  EL+
Sbjct: 355 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 414

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            +M+      DA  + +V DL+    +  KS    L
Sbjct: 415 SEMRSNGFSGDAFTIKMVADLITDGRLD-KSFSDML 449



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 229/455 (50%), Gaps = 20/455 (4%)

Query: 65  PPVSSFNILLASLA------KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN L+  L       +      ++   GL  ++ TY  ++N  CK+G        
Sbjct: 8   PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++  +   P+   ++++I  L  +    +A  LF+++   G  PNV TYN +I+G C 
Sbjct: 68  LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L  +M      I     P+ +T++ +I    KEG + +A+ L  +M    I
Sbjct: 128 FGRWSDAQRLLRDM------IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD VTYNS+I+G C  N +++AK +F    D    P VVTFN I+D  C+ +++DE  +
Sbjct: 182 FPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQ 237

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  + +RG+  N  TYNTL+ GFC +  +N A++LF  M S G   D ++ NIL+ G+C
Sbjct: 238 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 297

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +N+++EEAL L+  +    I    V YN +  G+ +  +V+ A  LF  +   GV  D +
Sbjct: 298 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 357

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I G C    I +A  LF  ++    E D   YN LI G  K+G +  + EL   +
Sbjct: 358 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 417

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
                  +  T   M+  L  DG++DK+   F DM
Sbjct: 418 RSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 448



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 6/316 (1%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++ G+ P V+TFN +++ LC   ++ EA+ L++ MV +G+  +  TY T+++G C MG 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A  L   ME    K D V Y+ +I+  CK+    +A  L+ EM+ KGI P V TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G     +   A +L  +M    +  D  T+   I    K G + EA +L   + + +
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-LHR 179

Query: 448 CEL-DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           C   D   YN +I G CK  R   A  +F  +      P+VVT+N +I   C   ++D+ 
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 235

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  ++       +  T++ LIHGF  ++  +   +L  +M    V PD    +I++  
Sbjct: 236 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295

Query: 567 LVKNEISLKSLPSFLV 582
             +NE   ++L  F V
Sbjct: 296 FCENEKLEEALELFEV 311



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 22/304 (7%)

Query: 32  FRDLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVSSFNILLASLA 78
            RD+  RE + +V+T N             EA  + D ML     P  V+ +N ++    
Sbjct: 138 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT-YNSMIYGFC 196

Query: 79  KNKHYDTRLNATGLF--PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           K+  +D   +   L   P++ T+N +I+ +C+  RV  G      I R     N  T+N+
Sbjct: 197 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 256

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           LI G      +  A  LF ++ + G  P+ IT N L+ G C       AL LFE +    
Sbjct: 257 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 316

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            ++      +TV Y+ II G+CK   VD+A  LF  +    + PDV TYN +I G C  +
Sbjct: 317 IDL------DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 370

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             ++A  LF +M D G +P   T+N ++    K  ++D++  L+  M   G   +A T  
Sbjct: 371 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 430

Query: 317 TLMD 320
            + D
Sbjct: 431 MVAD 434



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 9/183 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNI 101
           N A  +F  M+  H   P   + NILL    +N+  +  L        + +  +   YNI
Sbjct: 268 NAAQDLFQEMIS-HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 326

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+  CK  +V   +  F  +      P+  T+N +I G   +S I +A  LF K+K  G
Sbjct: 327 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 386

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+  TYNTLI G  + G    ++ L  EM   NG  G       V    I DG   + 
Sbjct: 387 HEPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVA-DLITDGRLDKS 444

Query: 222 FVD 224
           F D
Sbjct: 445 FSD 447


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 168/480 (35%), Positives = 274/480 (57%), Gaps = 6/480 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++ + G+ PN+ TY+ L+N  CK GR +     F  + +    P+ AT+ +L++G   + 
Sbjct: 296 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKG 355

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            ++E  AL   +   G +P+   +N LI    +      A+ +F +M            P
Sbjct: 356 ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG------LNP 409

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V Y T+ID LCK G VD A   F QM DE + P+++ Y SLIHGLC  + W++A+ L 
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +EM+D+G+  + + FN I+D  CK  ++ E+ +L DLMV+ GV+P+  TYNTL+DG CL 
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK++ A +L  SM S+G K D V+Y  LINGYC+   +++AL+L++EMVS G+ P ++TY
Sbjct: 530 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 589

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  GLF   +   A +L+  + + G   +  TY   + GLCKN    EA+ +F+ L +
Sbjct: 590 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 649

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              +L+ + +N +I  L K GR+  A +LF +     LVP+V TY++M + L   G +++
Sbjct: 650 TDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 709

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             DLFL MEEN  + D    + ++   ++  + ++    L  + EK    +AS  S +++
Sbjct: 710 LDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 179/611 (29%), Positives = 297/611 (48%), Gaps = 83/611 (13%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P ++TY 
Sbjct: 38  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI C C+ GR+ LGF A G +++  F  +A TF  L+KGL A+ R  +A  +   ++  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC P+V +YN L+ GLC    +  AL L   MA+  G       P+ V+Y+T+++G  K
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGG---GSPPDVVSYNTVLNGFFK 213

Query: 220 EGFVDKAKALFLQMKDENINPDVV-----------------------------------T 244
           EG  DKA + + +M D  I PDVV                                   T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YNS++HG C +    EA     +M   GV+P+VVT++ +M+ LCKN +  EA ++ D M 
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 305 QRGVRPNACTYNTLMDGFCLMG-----------------------------------KIN 329
           +RG+ P+  TY TL+ G+   G                                   K++
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A  +F  M   G   + V Y  +I+  CK+  V++A+  + +M+ +G+ P ++ Y +L 
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    + + A +L  EM   G+  +T  + + ID  CK G +IE+ +LF  +  +  +
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 513

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DI  YN LIDG C +G++  A +L  S+    + P++VTY  +I G C   +MD A  L
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M  +  +P++IT+++++ G       +   EL   + +     + S  +I++  L K
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633

Query: 570 NEISLKSLPSF 580
           N ++ ++L  F
Sbjct: 634 NNLTDEALRMF 644



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 167/570 (29%), Positives = 283/570 (49%), Gaps = 48/570 (8%)

Query: 59  RMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRV 112
           R   SPP V S+N +L    K    +K Y T   +   G+ P++ TY+ +I   CK   +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                    ++++   P+  T+NS++ G  +  +  EA     K+++ G EPNV+TY++L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF---------- 222
           +N LC+ G +  A  +F+ M     E      P+  TY T++ G   +G           
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLE------PDIATYRTLLQGYATKGALVEMHALLDL 366

Query: 223 -------------------------VDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                                    VD+A  +F +M+   +NP+VV Y ++I  LC +  
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
            ++A   F +M+D+G+ P+++ +  ++  LC   K D+A  L+  M+ RG+  N   +N+
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           ++D  C  G++  +E+LF  M  +G K D ++YN LI+G C   +++EA  L   MVS G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           +KP +VTY TL  G   + +++ AL LF EM   GV+ +  TY   + GL        A 
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           EL+ ++     +L++  YN ++ GLCK+     A  +F +L    L     T+NIMI  L
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G+MD+A+DLF     N   PDV T+ ++    I      ++++L   M+E     D+
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726

Query: 558 SIV-SIVVDLLVKNEISLKSLPSFLVQERQ 586
            ++ SIV  LL + +I+      F++ E+ 
Sbjct: 727 RMLNSIVRKLLQRGDITRAGTYLFMIDEKH 756



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 221/470 (47%), Gaps = 23/470 (4%)

Query: 131 AATFNSLIKGLHAESRIMEAAAL-----FTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
            A+   L + L   +R   AAA+       +  A    P V TY  LI   CR G     
Sbjct: 52  GASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGR---- 107

Query: 186 LNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINP 240
           L+L      G   +G V K     + +T++ ++ GLC +     A  + L+ M +    P
Sbjct: 108 LDL------GFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 161

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---GVQPSVVTFNVIMDELCKNRKMDEAS 297
           DV +YN+L+ GLC  N   EA  L   M D    G  P VV++N +++   K    D+A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
                M+ RG+ P+  TY++++   C    +++A E+  +M   G   D ++YN +++GY
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C + + +EA+   ++M S G++P VVTY++L   L +  +   A K+FD M + G+  D 
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + G    G ++E   L   +     + D   +N LI    K  ++  A  +F  
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L PNVV Y  +I  LC  G +D A   F  M +    P++I +  LIHG    ++
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             K  EL+ +M ++ +  +    + ++D   K    ++S   F +  R G
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 173/494 (35%), Positives = 276/494 (55%), Gaps = 8/494 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++  GL P+ Y Y +L++  CK GR +     F  ++R    PN   +  L+ G   E  
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS 322

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E  +    +   G  P+   +N +     +      A+++F++M            PN
Sbjct: 323 LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR------LSPN 376

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY  +ID LCK G VD A   F QM DE + PD+  ++SL++GLC  + W +A+ LF 
Sbjct: 377 IVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFF 436

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           E++DQG++   V FN +M  LC+  ++ EA RL+DLM++ GVRP+  +YNTL+DG CL G
Sbjct: 437 EVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTG 496

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I+ A +L   + S+G K D V+YN L++GYCK + +++A SL+REM+ KG+ P VVTYN
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF+  +   A +L+  M       +  TY   I+GLCKN ++ EA ++F +L   
Sbjct: 557 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSK 616

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +LDI   N +I  L K GR + A +LF ++    LVP+V TY ++ + L  +G +++ 
Sbjct: 617 DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 676

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +LF  MEEN  AP+    + L+   +   + ++    L K+ EK    +AS  S+++ +
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISI 736

Query: 567 LVKNEIS--LKSLP 578
             + E     KSLP
Sbjct: 737 YSRGEYQQLAKSLP 750



 Score =  305 bits (780), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 185/600 (30%), Positives = 296/600 (49%), Gaps = 58/600 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------------PN 95
           N+A  +FD ML  H  P  V +FN LL ++++ +          LF            P+
Sbjct: 33  NDALKLFDEML-THARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN-AATFNSLIKGLHAESRIMEAA-AL 153
            +TY ILI CFC++GR+  GF AFG IL++ +  N    F+ L+KGL    R+ EA   L
Sbjct: 92  SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN-GNGEIGVVCKPNTVTYST 212
             ++  FGC P+V +Y+ L+ G C       AL L   MA+ G+G       PN VTY+T
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGS----HTPNVVTYTT 207

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDGLCK   VD+AK +F  M D+ + P+  TY  LIHG      W E  ++  EM   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG----------- 321
           +QP    + V++D LCKN +  EA  + D ++++G++PN   Y  L+ G           
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 322 ---------------------FCLMGK---INRAEELFGSMESMGCKHDDVSYNILINGY 357
                                FC   K   I+ A  +F  M       + V+Y  LI+  
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   V++A+  + +M+ +G+ P +  +++L  GL  + + E A +LF E+   G+  DT
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             + T +  LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR+  A +L   
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L P+ VTYN ++ G C   ++D A  LF +M      PDV+T++ ++HG  +   
Sbjct: 508 IVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 567

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI---SLKSLPSFLVQERQGEVGESNV 594
            S+  EL   M   +   +    +I+++ L KN     + K   S   ++ Q ++  +N+
Sbjct: 568 FSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANI 627


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 192/576 (33%), Positives = 303/576 (52%), Gaps = 41/576 (7%)

Query: 7   CNRSFSFASAPISA-FRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPP 65
           C RS   A A  S    S F         L  R G   +    +A  +F  M+R  P P 
Sbjct: 23  CTRSIRHALAKKSRDGESGFGG-----ESLKLRSGFHEIKGLEDAIDLFGDMVRSRPLPS 77

Query: 66  PVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
            V  F  L+  + +    D       ++    +  N Y++ IL+ CFC   ++      F
Sbjct: 78  -VIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTF 136

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           G+I +  F P   TF++L+ GL  E RI EA  LF ++    C+PNV+T+ TL+NGLCR 
Sbjct: 137 GKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCRE 192

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD-ENI 238
           G  + A+ L + M     E G+  +PN +TY TI+DG+CK G    A  L  +M++  +I
Sbjct: 193 GRVVEAVALLDRML----EDGL--QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHI 246

Query: 239 NPDVVTY-----NSLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRK 292
            P+VV +       +I+G C +  W+EA++L  EM++ + + P VVT+N +++   K  K
Sbjct: 247 KPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGK 306

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             EA  L D M+ RG+ P+  TY++++DGFC   +++ AE +F  M + GC  D +++N 
Sbjct: 307 FFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNT 366

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI GYC+ K V++ + L  EM   G+    +TY TL  G  ++  +  A  L  EM   G
Sbjct: 367 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG 426

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-----------CELDIQAYNCLIDG 461
           V  +  T  T +DGLC NG + +A+E+F+ ++  K            E D+Q YN LI G
Sbjct: 427 VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISG 486

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L   G+   A EL+  +PH  +VP+ +TYN +I GLC   ++D+A  +F  M   + +P+
Sbjct: 487 LINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPN 546

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           V+TF  LI+G+ +        EL  +M  + ++ +A
Sbjct: 547 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 582



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 219/458 (47%), Gaps = 31/458 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNI 101
           EA  + D ML     P  ++ +  ++  + K     + LN        + + PN+  + +
Sbjct: 197 EAVALLDRMLEDGLQPNQIT-YGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPL 255

Query: 102 -----LINCFCKIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
                +IN FC  GR S        +L R   +P+  T+N+LI     E +  EA  L+ 
Sbjct: 256 ERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYD 315

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++   G  P+ ITY+++I+G C+      A ++F  MA         C P+ +T++T+I 
Sbjct: 316 EMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPDIITFNTLIA 369

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           G C+   VD    L  +M +  +  + +TY +LIHG C   D N A+ L  EM+  GV P
Sbjct: 370 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCP 429

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQR-----------GVRPNACTYNTLMDGFCL 324
           +VVT N ++D LC N K+ +A  +   M +            GV P+  TYN L+ G   
Sbjct: 430 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLIN 489

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            GK   AEEL+  M   G   D ++YN +I+G CK   ++EA  ++  M SK   P VVT
Sbjct: 490 EGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVT 549

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           + TL  G  +  +V+  L+LF EM R G+ A+  TY T I G  K G I  A+++F+ + 
Sbjct: 550 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMM 609

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
                 D      ++ GL     LK A  +   L   V
Sbjct: 610 ASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSV 647



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 195/380 (51%), Gaps = 25/380 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYN 100
           +EA  +   ML      P V ++N L+ +  K          YD  L   G+ P+  TY+
Sbjct: 272 SEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML-PRGIIPSTITYS 330

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +I+ FCK  R+      F  +     +P+  TFN+LI G     R+ +   L  ++   
Sbjct: 331 SMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA 390

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   N ITY TLI+G C+ G    A +L +EM +       VC PN VT +T++DGLC  
Sbjct: 391 GLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG-----VC-PNVVTCNTLLDGLCDN 444

Query: 221 GFVDKAKALFLQMKDE-----------NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           G +  A  +F  M+              + PDV TYN LI GL +   + EA+ L+ EM 
Sbjct: 445 GKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 504

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P  +T+N ++  LCK  ++DEA+++ D M  +   PN  T+ TL++G+C  G+++
Sbjct: 505 HRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 564

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
              ELF  M   G   + ++Y  LI+G+ K   +  AL +++EM++ G+ P  +T   + 
Sbjct: 565 DGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNML 624

Query: 390 LGLFEIHQVEHALKLFDEMQ 409
            GL+   +++ A+ + +++Q
Sbjct: 625 TGLWSKEELKRAVAMLEDLQ 644



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 212/429 (49%), Gaps = 17/429 (3%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  G H    + +A  LF  +      P+VI +  L+  + R G   + ++L  +M    
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
               V C  N  +++ ++   C    +  A + F ++     +P VVT+++L+HGLC  +
Sbjct: 109 ----VPC--NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVED 162

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA  LF +M     +P+VVTF  +M+ LC+  ++ EA  LLD M++ G++PN  TY 
Sbjct: 163 RISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 218

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDV------SYNILINGYCKNKEVEEALSLY 370
           T++DG C MG    A  L   ME +     +V          +ING+C +    EA  L 
Sbjct: 219 TIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLL 278

Query: 371 REMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +EM+  K I P VVTYN L     +  +   A +L+DEM   G+   T TY++ IDG CK
Sbjct: 279 QEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCK 338

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
              +  A  +F  +    C  DI  +N LI G C++ R+    +L   +    LV N +T
Sbjct: 339 QNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 398

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y  +I G C  G ++ A+DL  +M  +   P+V+T + L+ G     +     E+   M+
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458

Query: 550 EKKVMPDAS 558
           + K+  DAS
Sbjct: 459 KSKMDIDAS 467



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 182/393 (46%), Gaps = 17/393 (4%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF +M            P+ + +  ++  + + G +D   +L  +M+   +  +  +
Sbjct: 62  AIDLFGDMVRSRP------LPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +  L+   C  +    A   F ++   G  P+VVTF+ ++  LC   ++ EA   LDL  
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA---LDLFH 172

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           Q   +PN  T+ TLM+G C  G++  A  L   M   G + + ++Y  +++G CK  +  
Sbjct: 173 QM-CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231

Query: 365 EALSLYREMVS-KGIKPTVVTY-----NTLFLGLFEIHQVEHALKLFDEM-QRDGVAADT 417
            AL+L R+M     IKP VV +       +  G     +   A +L  EM +R  ++ D 
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   I+   K G   EA EL+  +           Y+ +IDG CK  RL  A  +F  
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      P+++T+N +I G C   ++D    L  +M E     + IT+  LIHGF ++ +
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +   +LL +M    V P+    + ++D L  N
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDN 444


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 168/480 (35%), Positives = 274/480 (57%), Gaps = 6/480 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++ + G+ PN+ TY+ L+N  CK GR +     F  + +    P+ AT+ +L++G   + 
Sbjct: 296 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKG 355

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            ++E  AL   +   G +P+   +N LI    +      A+ +F +M            P
Sbjct: 356 ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG------LNP 409

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V Y T+ID LCK G VD A   F QM DE + P+++ Y SLIHGLC  + W++A+ L 
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +EM+D+G+  + + FN I+D  CK  ++ E+ +L DLMV+ GV+P+  TYNTL+DG CL 
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK++ A +L  SM S+G K D V+Y  LINGYC+   +++AL+L++EMVS G+ P ++TY
Sbjct: 530 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 589

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  GLF   +   A +L+  + + G   +  TY   + GLCKN    EA+ +F+ L +
Sbjct: 590 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 649

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              +L+ + +N +I  L K GR+  A +LF +     LVP+V TY++M + L   G +++
Sbjct: 650 TDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 709

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             DLFL MEEN  + D    + ++   ++  + ++    L  + EK    +AS  S +++
Sbjct: 710 LDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 179/611 (29%), Positives = 297/611 (48%), Gaps = 83/611 (13%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P ++TY 
Sbjct: 38  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI C C+ GR+ LGF A G +++  F  +A TF  L+KGL A+ R  +A  +   ++  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC P+V +YN L+ GLC    +  AL L   MA+  G       P+ V+Y+T+++G  K
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGG---GSPPDVVSYNTVLNGFFK 213

Query: 220 EGFVDKAKALFLQMKDENINPDVV-----------------------------------T 244
           EG  DKA + + +M D  I PDVV                                   T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YNS++HG C +    EA     +M   GV+P+VVT++ +M+ LCKN +  EA ++ D M 
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 305 QRGVRPNACTYNTLMDGFCLMG-----------------------------------KIN 329
           +RG+ P+  TY TL+ G+   G                                   K++
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A  +F  M   G   + V Y  +I+  CK+  V++A+  + +M+ +G+ P ++ Y +L 
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    + + A +L  EM   G+  +T  + + ID  CK G +IE+ +LF  +  +  +
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 513

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DI  YN LIDG C +G++  A +L  S+    + P++VTY  +I G C   +MD A  L
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALAL 573

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M  +  +P++IT+++++ G       +   EL   + +     + S  +I++  L K
Sbjct: 574 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCK 633

Query: 570 NEISLKSLPSF 580
           N ++ ++L  F
Sbjct: 634 NNLTDEALRMF 644



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 282/566 (49%), Gaps = 48/566 (8%)

Query: 63  SPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           SPP V S+N +L    K    +K Y T   +   G+ P++ TY+ +I   CK   +    
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                ++++   P+  T+NS++ G  +  +  EA     K+++ G EPNV+TY++L+N L
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF-------------- 222
           C+ G +  A  +F+ M     E      P+  TY T++ G   +G               
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLE------PDIATYRTLLQGYATKGALVEMHALLDLMVRN 370

Query: 223 ---------------------VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
                                VD+A  +F +M+   +NP+VV Y ++I  LC +   ++A
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
              F +M+D+G+ P+++ +  ++  LC   K D+A  L+  M+ RG+  N   +N+++D 
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDS 490

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  G++  +E+LF  M  +G K D ++YN LI+G C   +++EA  L   MVS G+KP 
Sbjct: 491 HCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           +VTY TL  G   + +++ AL LF EM   GV+ +  TY   + GL        A EL+ 
Sbjct: 551 IVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 610

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           ++     +L++  YN ++ GLCK+     A  +F +L    L     T+NIMI  L   G
Sbjct: 611 SITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCG 670

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV- 560
           +MD+A+DLF     N   PDV T+ ++    I      ++++L   M+E     D+ ++ 
Sbjct: 671 RMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLN 730

Query: 561 SIVVDLLVKNEISLKSLPSFLVQERQ 586
           SIV  LL + +I+      F++ E+ 
Sbjct: 731 SIVRKLLQRGDITRAGTYLFMIDEKH 756



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 221/470 (47%), Gaps = 23/470 (4%)

Query: 131 AATFNSLIKGLHAESRIMEAAAL-----FTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
            A+   L + L   +R   AAA+       +  A    P V TY  LI   CR G     
Sbjct: 52  GASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGR---- 107

Query: 186 LNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINP 240
           L+L      G   +G V K     + +T++ ++ GLC +     A  + L+ M +    P
Sbjct: 108 LDL------GFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 161

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---GVQPSVVTFNVIMDELCKNRKMDEAS 297
           DV +YN+L+ GLC  N   EA  L   M D    G  P VV++N +++   K    D+A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
                M+ RG+ P+  TY++++   C    +++A E+  +M   G   D ++YN +++GY
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C + + +EA+   ++M S G++P VVTY++L   L +  +   A K+FD M + G+  D 
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + G    G ++E   L   +     + D   +N LI    K  ++  A  +F  
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L PNVV Y  +I  LC  G +D A   F  M +    P++I +  LIHG    ++
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             K  EL+ +M ++ +  +    + ++D   K    ++S   F +  R G
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 177/454 (38%), Positives = 267/454 (58%), Gaps = 12/454 (2%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFC 107
           F+++L      P +  F  +L SL K  HY        ++   G+  NL T +ILINCF 
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           ++G  SL F  F  IL+  + P+A T  +LIKGL  +  I +A     K+ A G + N +
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +Y TLINGLC+ G T  AL +   +       G + + + V Y+TIIDG+CK+  V+ A 
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRID------GKLVRLDVVMYNTIIDGVCKDKLVNDAF 229

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
             + +M  + I P VVTYN+LI GLC      +A  L  +M+ + + P+V TF++++D  
Sbjct: 230 DFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAF 289

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK  K+ EA  +  +M+++ V+PN  TYN+LM+G+CL+ ++N+AE +F +M  +G   D 
Sbjct: 290 CKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDV 349

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            SY+I+I+G+CK K V+EA+ L+ EM  K I P VVTYN+L  GL +  ++ +ALKL  E
Sbjct: 350 HSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGE 409

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G   +  TY + +D LCKN ++ +A+EL   L+    +  +  YN LI+GLCKSGR
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGR 469

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           LK A ++F  +       +V TYN MI+G C  G
Sbjct: 470 LKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 212/390 (54%), Gaps = 11/390 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNI-----LLASLAKNKHYDTRLNATGLFPNLYTYNILIN 104
           +F +F  +L+    P  ++   +     L   + K  H+  ++ A G   N  +Y  LIN
Sbjct: 123 SFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             CK+G+         RI       +   +N++I G+  +  + +A   ++++ A    P
Sbjct: 183 GLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP 242

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
            V+TYNTLI GLC  G    A+ L  +M   N        P   T+S ++D  CKEG V 
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILEN------INPTVYTFSILVDAFCKEGKVK 296

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +AK +F+ M  +++ P++VTYNSL++G C  N+ N+A+ +F  M   GV P V ++++++
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              CK + +DEA +L + M  + + P+  TYN+L+DG C  G+I+ A +L G M   G  
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQP 416

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + ++YN L++  CKN  V++A+ L  ++    I+P+V TYN L  GL +  +++ A K+
Sbjct: 417 PNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKV 476

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           F+++  +G   D  TY T I G CK G++I
Sbjct: 477 FEDVLVNGYNIDVYTYNTMIKGFCKKGFVI 506



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 205/408 (50%), Gaps = 8/408 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           P++I +  ++  L +  H  I ++L  +M  NG          N VT S +I+   + G 
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNG-------IASNLVTLSILINCFSQLGH 119

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
              + ++F  +  +   PD +T  +LI GLC   D ++A     +++  G Q + V++  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LCK  +   A  +L  +  + VR +   YNT++DG C    +N A + +  M +  
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
                V+YN LI G C   ++++A+ L  +M+ + I PTV T++ L     +  +V+ A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +F  M +  V  +  TY + ++G C    + +A  +F T+  +    D+ +Y+ +I G 
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK   +  A +LF  +    + P+VVTYN +I GLC  G++  A  L  +M +    P++
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           IT++ L+    + +   K  ELL K+K+  + P     +I+++ L K+
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKS 467



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 135/298 (45%), Gaps = 35/298 (11%)

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           L+ Q+   P+   +  ++         +    L   ME  G   + V+ +ILIN + +  
Sbjct: 59  LLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLG 118

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
               + S++  ++ KG +P  +T  TL  GL     +  AL   D++   G   +  +Y 
Sbjct: 119 HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYR 178

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I+GLCK G    A+E+ R +      LD+  YN +IDG+CK   +  A++ +  +   
Sbjct: 179 TLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 482 VLVPNVVTYNIMIQGL-----------------------------------CNDGQMDKA 506
            + P VVTYN +I GL                                   C +G++ +A
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +++F+ M +    P+++T++ L++G+  +NE +K   + + M +  V PD    SI++
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/153 (18%), Positives = 67/153 (43%)

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           +   +  L K  +    V L R +       ++   + LI+   + G    ++ +F ++ 
Sbjct: 72  FGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNIL 131

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                P+ +T   +I+GLC  G + KA      +       + +++  LI+G  ++ +  
Sbjct: 132 KKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTK 191

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
              E+L ++  K V  D  + + ++D + K+++
Sbjct: 192 AALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKL 224


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 185/565 (32%), Positives = 296/565 (52%), Gaps = 41/565 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD++     + +  ++ ML    SP  V ++N ++A+L K +  D      T +  +G
Sbjct: 100 KEGDLD-----KTYSTYNEMLDQRISPN-VVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P+  TYN +++ FC  G+     +   ++      P+  T+NSL+  L    R  EA 
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG------VVC-- 203
            +F  +   G +P + TY TL+ G    G  +    L + M              +VC  
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273

Query: 204 ---------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
                                 PN VTY  +I  LCK G V+ A   F QM DE ++P  
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           + YNSLIHGLC  N W  A+ L +EM+D+G+  + + FN I+D  CK  ++ E+ +L DL
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV+ GV+P+  TY+TL+DG+CL GK++ A +L  SM S+G K D V+Y+ LINGYCK   
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +++AL L+REM S G+ P ++TYN +  GLF+  +   A +L+  + + G   +  TY  
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + GLCKN    +A+ +F+ L ++  +L+ + +N +ID L K GR   A +LF +     
Sbjct: 514 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 573

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           LVPN  TY +M + +   G +++   LFL ME+N    D    + ++   ++  E ++  
Sbjct: 574 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 633

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLL 567
             L  + EK    +AS  S+ +DLL
Sbjct: 634 TYLSMIDEKHFSLEASTASLFIDLL 658



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 256/491 (52%), Gaps = 12/491 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRS----CFTPNAATFNSLIKGLHAESRIME 149
           P++++YNIL+N  C   R S   +    I+      C  P+  +++++I G   E  + +
Sbjct: 49  PDVFSYNILLNGLCDENR-SQEALELLHIMADDGGDC-PPDVVSYSTVINGFFKEGDLDK 106

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
             + + ++      PNV+TYN++I  LC+      A+ +   M       GV+  P+ +T
Sbjct: 107 TYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS----GVM--PDCMT 160

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y++I+ G C  G   +A     +M+ + + PDVVTYNSL+  LC      EA+++F  M 
Sbjct: 161 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 220

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P + T+  ++        + E   LLDLMV+ G+ PN   ++ L+  +    K+ 
Sbjct: 221 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 280

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  +F  M   G   + V+Y  +I   CK+  VE+A+  + +M+ +G+ P  + YN+L 
Sbjct: 281 EAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 340

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL   ++ E A +L  EM   G+  +T  + + ID  CK G +IE+ +LF  +  +  +
Sbjct: 341 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 400

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DI  Y+ LIDG C +G++  A +L  S+    + P+ VTY+ +I G C   +M  A  L
Sbjct: 401 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVL 460

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +ME +  +PD+IT+++++ G  +    +   EL   + +     + S  +I++  L K
Sbjct: 461 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCK 520

Query: 570 NEISLKSLPSF 580
           N+++  +L  F
Sbjct: 521 NKLTDDALRMF 531



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 220/456 (48%), Gaps = 40/456 (8%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  +F +L   G  P+V +YN L+NGLC    +  AL L   MA+  G+    C P+ V
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVV 89

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +YST+I+G  KEG +DK  + + +M D+ I+P+VVTYNS+I  LC A   ++A  +   M
Sbjct: 90  SYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  GV P  +T+N I+   C + +  EA   L  M   GV P+  TYN+LMD  C  G+ 
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A ++F SM   G K +  +Y  L+ GY     + E   L   MV  GI P    ++ L
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                +  +VE A+ +F +M++ G+  +  TY   I  LCK+G + +A+  F  +     
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 449 ELDIQAYNCLIDGL-----------------------------------CKSGRLKFAWE 473
                 YN LI GL                                   CK GR+  + +
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  +    + P+++TY+ +I G C  G+MD+A  L   M      PD +T+  LI+G+ 
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +I+       L  +M+   V PD    +I++  L +
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 191/427 (44%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP+      F+IL+ + AK +  +      +++   GL PN  TY 
Sbjct: 246 EMHGLLDLMVRNGIHPNH---YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 302

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV    + F +++    +P    +NSLI GL                   
Sbjct: 303 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 362

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +P++ITY+TLI+G C  G    A
Sbjct: 363 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L   M      + V  KP+ VTYST+I+G CK   +  A  LF +M+   ++PD++TY
Sbjct: 423 TKLLASM------VSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITY 476

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ +   G Q  + T+N+I+  LCKN+  D+A R+   +  
Sbjct: 477 NIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCL 536

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++  A T+N ++D    +G+ + A++LF +  S G   +  +Y ++         +EE
Sbjct: 537 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 596

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N +   L +  ++  A      +     + +  T + FID
Sbjct: 597 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 656

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 657 LLSGGKY 663



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 2/244 (0%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALK 403
           D  SYNIL+NG C     +EAL L   M   G    P VV+Y+T+  G F+   ++    
Sbjct: 50  DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS 109

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
            ++EM    ++ +  TY + I  LCK   + +A+E+  T+       D   YN ++ G C
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            SG+ K A      +    + P+VVTYN ++  LC +G+  +AR +F  M +    P++ 
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEIT 229

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           T+  L+ G+       +++ LL  M    + P+  + SI+V    K E   +++  F   
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289

Query: 584 ERQG 587
            +QG
Sbjct: 290 RQQG 293


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 177/504 (35%), Positives = 280/504 (55%), Gaps = 16/504 (3%)

Query: 65  PPVSSFNILLASLAKNKH----YD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K +     YD      A G  P + TYN +I+  CK GR+      
Sbjct: 28  PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87

Query: 119 FGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +  + +   F P   T+++LI GL  +  + +   L  ++   GC PN +TYNTL+N L 
Sbjct: 88  YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM--KD 235
             G +  A +L E+MA  NG     C P  +T+  II GLCKEG ++ A  +  +M   +
Sbjct: 148 GQGRSKEAFSLLEQMA-ANG-----CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIE 201

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             ++PDV+T+NS++ GLC      +A  +F   +++G +P+VVT++ ++D L K  KMDE
Sbjct: 202 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 261

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A +LL  MV+ G R N  TY+T++DG   +G++  A  +   M   GC  D V+YN LI+
Sbjct: 262 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 321

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+ K + + EA+ L REM+  G  P+VVTY TL  GL    + + A+++ D M   G A 
Sbjct: 322 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 381

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
           +  TY++ +DGLCK G + EA+  F  + R       + AY+ LIDGLCK+G++  A+E 
Sbjct: 382 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEF 441

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              +     +P+VVT++I+I GLC+ G++D   +LF  M E    PD++T+  L+    R
Sbjct: 442 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCR 501

Query: 535 INEPSKVNELLHKMKEKKVMPDAS 558
            +   +  +L  +M+   + PD S
Sbjct: 502 ASRVDEAFDLFQQMRSDGLSPDRS 525



 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/506 (33%), Positives = 262/506 (51%), Gaps = 43/506 (8%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+  CK  +V      F +++     P+  T+ +LI GL  + R+ EA  LF + +A G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P V+TYNT+I+GLC+ G    AL L+++MA     I    +P  VTYST+IDGLC++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMA-----IHFGFRPTVVTYSTLIDGLCRDH 115

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSL--------------------------------- 248
            VDK   L  +M      P+ VTYN+L                                 
Sbjct: 116 EVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFG 175

Query: 249 --IHGLCHANDWNEAKRLFIEM--MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
             I GLC   +   A R+  EM  ++ G+ P V+TFN ++D LCK +++ +A  +    +
Sbjct: 176 LIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 235

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RG RPN  TY+TL+DG   M K++ A +L   M  +GC+ + V+Y+ +++G  K   +E
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A+ + R+M   G  P  VTYNTL  G F+  ++  A+ L  EM   G      TYTT  
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG-VL 483
            GLC++G   EAVE+   +    C  +   Y+ ++DGLCK+GR+  A   F  +    V+
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 415

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P+V+ Y+ +I GLC  G++D+A +    M      PDV+TF +LI+G           E
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
           L   M E+  +PD    + +VD L +
Sbjct: 476 LFRGMAERGCVPDMVTYATLVDRLCR 501



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 147/417 (35%), Positives = 220/417 (52%), Gaps = 25/417 (5%)

Query: 65  PPVSSFNILL-ASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+ A L + +  +      ++ A G  P L T+ ++I   CK G +   F  
Sbjct: 134 PNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRV 193

Query: 119 FGRI--LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
              +  + S  +P+  TFNS++ GL  E RI++A  +F +    GC PNV+TY+TLI+GL
Sbjct: 194 VDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGL 253

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            +      AL L  +M     E+G  C+ NTVTYST++DGL K G ++ A  +  QM+D 
Sbjct: 254 SKMAKMDEALQLLAKMV----ELG--CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 307

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD VTYN+LI G        EA  L  EM++ G  PSVVT+  +   LC++ + DEA
Sbjct: 308 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV------SY 350
             +LD M  RG  PNA TY++++DG C  G++    E  G  E M    D+V      +Y
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVT---EALGYFEKMA--RDEVVAPHVIAY 422

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           + LI+G CK  +++EA      M+  G  P VVT++ L  GL +  +++  L+LF  M  
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
            G   D  TY T +D LC+   + EA +LF+ +R      D      +I GL +  R
Sbjct: 483 RGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 199/404 (49%), Gaps = 51/404 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA--------TGLFPNLYTY 99
            EAF + + M   +  PP + +F +++  L K    +             +GL P++ T+
Sbjct: 153 KEAFSLLEQMA-ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITF 211

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N +++  CK  R+      F R L     PN  T+++LI GL   +++ EA  L  K+  
Sbjct: 212 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 271

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC  N +TY+T+++GL + G    A+ +  +M +        C P+ VTY+T+IDG  K
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG------CLPDAVTYNTLIDGFFK 325

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL--------------- 264
              + +A  L  +M +   +P VVTY +L HGLC +  ++EA  +               
Sbjct: 326 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385

Query: 265 -------------------FIEMM--DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
                              + E M  D+ V P V+ ++ ++D LCK  K+DEA   L+ M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           ++ G  P+  T++ L++G C  G+I+   ELF  M   GC  D V+Y  L++  C+   V
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           +EA  L+++M S G+ P   T  T+  GL E+++ E A ++ DE
Sbjct: 506 DEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 170/327 (51%), Gaps = 3/327 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I GLC +   ++A  LF +M+D+ + P VVT+  ++D L K R++ EA  L +    +G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSME-SMGCKHDDVSYNILINGYCKNKEVEEA 366
             P   TYNT++DG C  G+I  A  L+  M    G +   V+Y+ LI+G C++ EV++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L  EM  +G  P  VTYNTL   L    + + A  L ++M  +G   +  T+   I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 427 LCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           LCK G I  A  +   + +++  L  D+  +N ++DGLCK  R+  A  +F         
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PNVVTY+ +I GL    +MD+A  L   M E     + +T+  ++ G +++        +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNE 571
           L +M++   +PDA   + ++D   K +
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQ 327


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 170/494 (34%), Positives = 271/494 (54%), Gaps = 8/494 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++A GL P+ YTY  L+N  CK GR       F  ++R    P  +T+  LI G   +  
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGA 354

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E  +    +   G  P+   +N   +   + G    A+++F +M            PN
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG------LSPN 408

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y  +ID LCK G VD A+  F QM +E + P++V +NSL++GLC  + W  A+ L  
Sbjct: 409 VVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVY 468

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+DQG+ P+ V FN ++  LC   ++ E  RL+DLM   GVRP+A +Y  L+ G+CL G
Sbjct: 469 EMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTG 528

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + + AE++F  M S+G    +V+YN L++GYC    +++A  L+REM+ KG+ P VVTYN
Sbjct: 529 RTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYN 588

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF+  +   A +L+  M   G   D  TY   ++GLCK+  + EA ++F++L   
Sbjct: 589 TILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 648

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +L+I  +  +I  L K GR + A +LF ++P   LVPNVVTY ++ + L  +G +++ 
Sbjct: 649 GLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEF 708

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF  ME+N  AP+    + L+   +   + S+    L K+ E+    +AS  S+++ +
Sbjct: 709 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSI 768

Query: 567 LVKNEIS--LKSLP 578
              +E     KSLP
Sbjct: 769 FTSDEYQHHAKSLP 782



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 177/606 (29%), Positives = 286/606 (47%), Gaps = 87/606 (14%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK----------HYD--TRLNATGLFPN 95
           ++A  +FD +L  H  P  V +FN LL ++++ +          H++   R  +  + PN
Sbjct: 31  DDALKLFDELLH-HARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALF 154
           L TY+ILI  FC++G +  GF AFG IL++ +  +    N L+KGL    R+ EA   L 
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++   GC P+ ++Y  L+ GLC       AL L   MA+ +G     C PN V+YS +I
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGR---RCPPNVVSYSIVI 206

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G   EG VDK   LFL+M D  I PDVVTY ++I GLC A  ++ A+ +F +M+D G +
Sbjct: 207 NGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266

Query: 275 PSVVTFNVI-----------------------------------MDELCKNRKMDEASRL 299
           P+  T+N +                                   ++ LCKN +  EA   
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGK-------------------------------- 327
            D M+++G++P   TY  L+ G+   G                                 
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386

Query: 328 ---INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
              I++A ++F  M   G   + V+Y  LI+  CK   V++A   + +M+++G+ P +V 
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +N+L  GL  + + E A +L  EM   G+  +   + T I  LC  G ++E   L   + 
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +    D  +Y  LI G C +GR   A ++F  +    L P  VTYN ++ G C+  ++D
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  LF +M      P V+T++ ++HG  +    S+  EL   M       D    +I++
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 626

Query: 565 DLLVKN 570
           + L K+
Sbjct: 627 NGLCKS 632



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 170/376 (45%), Gaps = 12/376 (3%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK-------RLFIEMMDQGVQP 275
           +D A  LF ++        V  +N L+  +  A   + ++       R+  E  D+ V P
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDK-VAP 88

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE-L 334
           ++ T+++++   C+   ++       L+++ G R +    N L+ G C   ++  A + L
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGIKPTVVTYNTLFLG 391
              M  +GC  D VSY IL+ G C  K  EEAL L   M     +   P VV+Y+ +  G
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            F   QV+    LF EM   G+  D  TYTT IDGLCK      A  +F+ +     + +
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YNCLI G    G+ K   ++   +    L P+  TY  ++  LC +G+  +AR  F 
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M      P V T+ +LIHG+      S+++  L  M E  + PD  I +I      K  
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388

Query: 572 ISLKSLPSFLVQERQG 587
           +  K++  F    + G
Sbjct: 389 MIDKAMDIFNKMRQHG 404



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 13/223 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY----DTRLNA--TGLFPNLYTYNI 101
           ++A+C+F  MLR   + P V ++N +L  L + K +    +  LN   +G   ++YTYNI
Sbjct: 566 DDAYCLFREMLRKGVT-PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  CK   V   F  F  +       N  TF  +I  L    R  +A  LF  + A G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV+TY  +   L   G      +LF  M   NG       PN+   + ++  L   G
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK-NGT-----APNSQMLNALVRRLLHRG 738

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
            + +A A   ++ + N + +  T + L+         + AK L
Sbjct: 739 DISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 185/522 (35%), Positives = 282/522 (54%), Gaps = 14/522 (2%)

Query: 65  PPVSSFNILLA---SLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N L+    S  + K    RL    A GL P++ TY++L++  CK G+ +     
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R    PN   +  L+ G  A   I +   L   + A G  PN   +N ++    +
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAK 456

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A+++F  M+           P+ VTY  +ID LCK G VD A   F QM ++ +
Sbjct: 457 KAMIDEAMHIFSRMSQHG------LSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ V +NSL++GLC  + W +A+ LF EM DQGV+P+VV FN IM  LC   ++  A R
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+D M + GVRPN  +YNTL+ G CL G+ + A +L   M S+G K D +SY+ L+ GYC
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++ A  L+REM+ KG+ P  VTY+T+  GLF   +   A +L+  M + G   D  
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   ++GLCK   + EA ++F++L       +I  +  +ID L K GR K A +LF S+
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
           P   LVPNVVTY IM++ +  +G +D+  +LFL ME++   PD +  + +I   +   E 
Sbjct: 751 PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS--LKSLP 578
            +    L K+ E     +AS  S+++ L  + E     KSLP
Sbjct: 811 MRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLP 852



 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 196/600 (32%), Positives = 288/600 (48%), Gaps = 84/600 (14%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF--- 93
            R G + +   ++A  +FD +L  H  P  V +FN LL  +A+ +   T   A  LF   
Sbjct: 23  ARSGSLGI---DDALKLFDELLP-HARPASVRAFNHLLNVVARARCSSTSELAVSLFNRM 78

Query: 94  ---------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
                    P+L TY+IL  CFC++GR+  GF AFG IL++ +  N    N L+ GL   
Sbjct: 79  ARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDA 138

Query: 145 SRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE----- 198
            R+ EA   L  ++  FGC PNV++ NTL+ GLC       AL L   MA   G      
Sbjct: 139 KRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPN 198

Query: 199 -------IGVVCKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFL 231
                  I  +CK                     + VTYSTIIDGLCK   VD+A+ +  
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M D+ + PDVVTYN++I GLC A   + A+ +   M+D+GV+P VVT+N I+D LCK +
Sbjct: 259 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 318

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +D A  +L  M+ + V+P+  TYN L+ G+   G+          M + G   D V+Y+
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG-------------------- 391
           +L++  CKN +  EA  ++  M+ KGIKP V  Y  L  G                    
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 392 -------LFEI--------HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
                  +F I          ++ A+ +F  M + G++ D  TY   ID LCK G + +A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           V  F  +       +   +N L+ GLC   R + A ELF  +    + PNVV +N ++  
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LCN+GQ+  A+ L   ME     P+VI+++ LI G        +  +LL  M    + PD
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 275/598 (45%), Gaps = 88/598 (14%)

Query: 54  FDYMLRMHPS---PPPVSSFNILLASLAKNKHYDTRL---------NATGLFPNLYTYNI 101
            D +LR  P     P V S N LL  L   K  +  L               PN+ TYN 
Sbjct: 145 MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT 204

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+  CK   V         ++      +  T++++I GL     +  A  +   +   G
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+V+TYNT+I+GLC+      A  + + M +     GV  KP+ VTY+TIIDGLCK  
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK----GV--KPDVVTYNTIIDGLCKAQ 318

Query: 222 FVDKAKALFLQMKDENI-----------------------------------NPDVVTYN 246
            VD+A  +   M D+++                                   +PDVVTY+
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV---------------------------- 278
            L+  LC      EA+++F  M+ +G++P+V                             
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 279 -------TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
                   FN+++    K   +DEA  +   M Q G+ P+  TY  L+D  C +G+++ A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
              F  M + G   + V +N L+ G C     E+A  L+ EM  +G++P VV +NT+   
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    QV  A +L D M+R GV  +  +Y T I G C  G   EA +L   +  +  + D
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + +Y+ L+ G CK+GR+  A+ LF  +    + P  VTY+ ++QGL +  +  +A++L+L
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +M ++    D+ T++++++G  + N   +  ++   +  K + P+    +I++D+L K
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFK 736



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 224/448 (50%), Gaps = 10/448 (2%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCR---TGHTMIALNLFEEMANGNGEIGVVC 203
           I +A  LF +L       +V  +N L+N + R   +  + +A++LF  MA          
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSN---KV 86

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +P+  TYS +    C+ G ++   A F  +       + V  N L++GLC A   +EA  
Sbjct: 87  RPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMD 146

Query: 264 LFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG---VRPNACTYNTLM 319
           + +  M + G  P+VV+ N ++  LC  ++++EA  LL  M + G     PN  TYNT++
Sbjct: 147 ILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTII 206

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG C    ++RAE +   M   G K D V+Y+ +I+G CK + V+ A  + + M+ KG+K
Sbjct: 207 DGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK 266

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P VVTYNT+  GL +   V+ A  +   M   GV  D  TY T IDGLCK   +  A  +
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            + +     + DIQ YNCLI G   +G  K        +    L P+VVTY++++  LC 
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           +G+  +AR +F  M      P+V  + +L+HG+      + + +LL  M    + P+  I
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +IV+    K  +  +++  F    + G
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHG 474



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 11/222 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLA-----SLAKNKHYDTRLNATGLFPNLYTYNIL 102
           + A+C+F  MLR   +P  V+   IL         ++ K     +  +G   ++YTYNI+
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N  CK   V   F  F  +      PN  TF  +I  L    R  +A  LF  + + G 
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PNV+TY  ++  + + G      NLF  M          C P++V  + II  L   G 
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG------CTPDSVMLNAIIRSLLGRGE 809

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           + +A A   ++ + N + +  T + LI         N AK L
Sbjct: 810 IMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 181/541 (33%), Positives = 281/541 (51%), Gaps = 42/541 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  LL    +    D        + +  L PN++  +ILI+  CK  R       
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC- 177
           F  +  S    +   + +L+ GL  E R+ +A A+  +++  GCEPNV+TYN+LI+GLC 
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 178 ----------------------------------RTGHTMIALNLFEEMANGNG-EIGVV 202
                                             RTG    A+ LF+EM +    ++   
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C PN +TYS +IDGLCK   V +A  L   MK    +PDV+TY  L+ GLC  +    A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            +  EM+D G  P++VT+N ++  LC+ R++ +A  L+  M  RG  PN  TY TL+DG 
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C +G++  A  +   M   G   D + YN+LING CK  +V+E+++L R  VS GIKP V
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY+++  GL   ++++ A +L   ++  G   D   Y+T IDGLCK G + EA +L+  
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +    C+ D+  Y+ LIDGLCK+GR+  A  L   +      P+ +TYN +I+GLC+   
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D+A +L  +ME +  AP  +T+++LIHG  R+        LL + K + V    + +  
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDT 546

Query: 563 V 563
           +
Sbjct: 547 I 547



 Score =  294 bits (753), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 171/488 (35%), Positives = 264/488 (54%), Gaps = 33/488 (6%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------------- 93
           P+ A  +F++M  +  SP  V+ +N LL  L +    +    A  LF             
Sbjct: 130 PDRAQELFEHMKSVECSPSMVT-YNTLLDGLFRTGKLE---RAMALFQEMLDRRSHDMDD 185

Query: 94  ---PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
              PN+ TY++LI+  CK  RVS        +     +P+  T+  L+ GL  ES++  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++   GC PN++TYN+L++GLCR      AL L  +M          C PN VTY
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG------CTPNVVTY 299

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T+IDGLCK G V  A A+   M D+   PD++ YN LI+GLC A+  +E+  L    + 
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G++P VVT++ ++  LC++ ++DEA RLL  +  RG  P+   Y+TL+DG C  GK++ 
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L+  M   GC  D V+Y+ LI+G CK   V+EA  L   MV  G  P+ +TYN+L  
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC-- 448
           GL +++ ++ A++L +EM+R   A    TY   I G+C+   +  AV L    +  +C  
Sbjct: 480 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA-RCVA 538

Query: 449 ----ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                LD  AY+ LIDGLCK+GR+  A + F  +    ++P+ +TY+I+++GL     + 
Sbjct: 539 AGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 598

Query: 505 KARDLFLD 512
           + R L LD
Sbjct: 599 ELRHLVLD 606



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/415 (33%), Positives = 208/415 (50%), Gaps = 13/415 (3%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C+P+V TY  L+ G CR G    A   F+EM + N        PN    S +IDGLCK  
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKN------LVPNVFLCSILIDGLCKAK 58

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
               A   F  M+   I  D V Y +L+ GL      ++A  +  EM D G +P+VVT+N
Sbjct: 59  RSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYN 118

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D LCKN + D A  L + M      P+  TYNTL+DG    GK+ RA  LF  M   
Sbjct: 119 SLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178

Query: 342 G-------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
                   C  + ++Y++LI+G CK   V +A+ L   M ++G  P V+TY  L  GL +
Sbjct: 179 RSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK 238

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +V  A ++  EM   G   +  TY + + GLC+   + +A+ L R +    C  ++  
Sbjct: 239 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 298

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y  LIDGLCK GR+K A  +   +      P+++ YN++I GLC   Q+D++  L     
Sbjct: 299 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 358

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                PDV+T+  +I+G  R N   +   LL  +K +   PD  + S ++D L K
Sbjct: 359 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 413



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 203/370 (54%), Gaps = 7/370 (1%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +C+P+  TY+ ++ G C+ G +D+A+  F +M+ +N+ P+V   + LI GLC A    +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            R F  M   G+    V +  ++  L K +++D+A  +L  M   G  PN  TYN+L+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK----- 376
            C   + +RA+ELF  M+S+ C    V+YN L++G  +  ++E A++L++EM+ +     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 377 --GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
                P V+TY+ L  GL + ++V  A++L + M+  G + D  TYT  +DGLCK   + 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
            A E+ R +    C  ++  YN L+ GLC++ R+  A  L   +      PNVVTY  +I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLC  G++  A  +  DM +    PD++ ++MLI+G  + ++  +   LL +     + 
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 555 PDASIVSIVV 564
           PD    S V+
Sbjct: 364 PDVVTYSSVI 373



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 17/219 (7%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V  ++ L+  L K    D   +        G   ++ TY+ LI+  CK GRV    +
Sbjct: 398 PPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHL 457

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              R++R    P+  T+NSLIKGL   + + EA  L  +++   C P+ +TYN LI+G+C
Sbjct: 458 LLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMC 517

Query: 178 RTGHTMIALNLFEE-----MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           R      A+ L E+     +A G   +      +T+ YS++IDGLCK G V +A   F +
Sbjct: 518 RMERVDSAVVLLEQAKARCVAAGGTAL------DTIAYSSLIDGLCKAGRVAEALDYFQE 571

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           M D  + PD +TY+ L+ GL  + D +E + L ++ M Q
Sbjct: 572 MIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 610



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 35/158 (22%)

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC--------- 498
           C+ D+  Y  L+ G C+ G +  A   F  +    LVPNV   +I+I GLC         
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 499 --------------------------NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                                      + ++D+A  +  +M ++   P+V+T++ LI G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            + NEP +  EL   MK  +  P     + ++D L + 
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRT 162



 Score = 45.4 bits (106), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PDV T+  L+ GF R  E  +      +M+ K ++P+  + SI++D L K + S+ +L  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 580 FLVQERQGEVGES 592
           F   +  G V ++
Sbjct: 67  FRAMQGSGIVADT 79


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  322 bits (825), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/522 (36%), Positives = 281/522 (53%), Gaps = 33/522 (6%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK--NKHYDT------RLNATGLFP 94
           N +  ++A   F  MLRM+PSP  +  FN +L SL K  N +Y        RL    + P
Sbjct: 23  NHVDVHDAISSFYRMLRMNPSPSIIE-FNKILGSLVKSNNNNYPIAISLYHRLQLNAITP 81

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++ T+N +INC+C +G +   F    +IL+  + P+  T  +LIKGL    ++ EA    
Sbjct: 82  SIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFH 141

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             + A G   N ++Y  LINGLC+ G T  AL +  ++       G +   N V YSTII
Sbjct: 142 DHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKID------GKLVNTNVVMYSTII 195

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           D LCKE  V +A  L+ QM  + ++PDVVT+++LI+G C    + EA  LF EM+   + 
Sbjct: 196 DSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNIN 255

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P V TFN+++D LCK     E   +L +M++                   + ++N+A+ +
Sbjct: 256 PDVCTFNILVDALCKEGSTKETKNVLAVMMKE------------------VNQVNKAKHV 297

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  +       D  SY I+I   CK K V+EALSL+ EM  KGI P  VTY++L  GL +
Sbjct: 298 FNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCK 357

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++ HA +L D+M   G  AD  TYT+F+  LCKN  + +AV L + ++    + +I  
Sbjct: 358 SERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINT 417

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN LIDGLCK GR + A  +F  L        V TYNIMI GLC +G  D+A  L   ME
Sbjct: 418 YNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKME 477

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +N   PDV+T++ +I    + +E  K  +LL +M  + ++ +
Sbjct: 478 DNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 163/326 (50%), Gaps = 36/326 (11%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTY 99
           EA+ ++  M+ +    P V +F+ L+        +     A GLF         P++ T+
Sbjct: 206 EAYELYSQMI-VKKVSPDVVTFSALIYGFCMVGQFK---EAFGLFHEMVLTNINPDVCTF 261

Query: 100 NILINCFCKIG-----------------RVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           NIL++  CK G                 +V+     F  I +   TP+  ++  +IK L 
Sbjct: 262 NILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLC 321

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               + EA +LF +++  G  P+ +TY++LI+GLC++     A  L ++M +  G+    
Sbjct: 322 KIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQM-HARGQ---- 376

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
              + +TY++ +  LCK   VDKA AL  ++KD+ I P++ TYN LI GLC    +  A+
Sbjct: 377 -PADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQ 435

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            +F +++ +G + +V T+N++++ LC     DEA  LL+ M   G  P+  TY T++   
Sbjct: 436 VIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRAL 495

Query: 323 CLMGKINRAEELFGSMESMGCKHDDV 348
               + ++AE+L   M + G   + V
Sbjct: 496 FKNDENHKAEKLLREMIARGLLEEKV 521



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 107/204 (52%)

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+SLY  +    I P++VT+NT+      + +++ A  +  ++ + G   DT T TT I 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC NG + EA+     +      L+  +Y  LI+GLCK G  + A ++   +   ++  
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT 186

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NVV Y+ +I  LC +  + +A +L+  M     +PDV+TF  LI+GF  + +  +   L 
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246

Query: 546 HKMKEKKVMPDASIVSIVVDLLVK 569
           H+M    + PD    +I+VD L K
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCK 270



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 54/343 (15%)

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK--NRKMDEASRLLDLMVQRGVRPNACT 314
           D ++A   F  M+     PS++ FN I+  L K  N     A  L   +    + P+  T
Sbjct: 26  DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVT 85

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           +NT+                                   IN YC   E++ A S+  +++
Sbjct: 86  FNTV-----------------------------------INCYCHLGEMDFAFSVLAKIL 110

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
             G  P  +T  TL  GL    +V  AL   D +   G   +  +Y   I+GLCK G   
Sbjct: 111 KMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETR 170

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
            A+++ R +       ++  Y+ +ID LCK   +  A+EL+  +    + P+VVT++ +I
Sbjct: 171 AALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALI 230

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR-----------------INE 537
            G C  GQ  +A  LF +M      PDV TF++L+    +                 +N+
Sbjct: 231 YGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQ 290

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            +K   + + + +++V PD    +I++  L K ++  ++L  F
Sbjct: 291 VNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLF 333


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 174/487 (35%), Positives = 274/487 (56%), Gaps = 51/487 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNAT 90
           TR  DI +   N+A  +F  M++  P P  V  FN LL+++ K K YD       ++   
Sbjct: 59  TRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISLGKKMEVL 114

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +LYT+NI+INCFC   +VSL     G++L+                          
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK-------------------------- 148

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                     G EP+ +T  +L+NG CR      A++L ++M     EIG   KP+ V Y
Sbjct: 149 ---------LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVAY 193

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + IID LCK   V+ A   F +++ + I P+VVTY +L++GLC+++ W++A RL  +M+ 
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P+V+T++ ++D   KN K+ EA  L + MV+  + P+  TY++L++G CL  +I+ 
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++F  M S GC  D VSYN LING+CK K VE+ + L+REM  +G+    VTYNTL  
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G F+   V+ A + F +M   G++ D  TY   + GLC NG + +A+ +F  ++  + +L
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y  +I G+CK+G+++ AW LFCSL    L P++VTY  M+ GLC  G + +   L+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 511 LDMEENA 517
             M++  
Sbjct: 494 TKMKQEG 500



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 219/411 (53%), Gaps = 6/411 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ +A  LF+ +      P+++ +N L++ + +     + ++L ++M      +G+  + 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RN 118

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  T++ +I+  C    V  A ++  +M      PD VT  SL++G C  N  ++A  L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G +P +V +N I+D LCK +++++A      + ++G+RPN  TY  L++G C  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            + + A  L   M       + ++Y+ L++ + KN +V EA  L+ EMV   I P +VTY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L  GL    +++ A ++FD M   G  AD  +Y T I+G CK   + + ++LFR +  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                +   YN LI G  ++G +  A E F  +    + P++ TYNI++ GLC++G+++K
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A  +F DM++     D++T+  +I G  +  +  +   L   +  K + PD
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 198/380 (52%), Gaps = 6/380 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF +M            P+ V ++ ++  + K    D   +L  +M+   I  D+ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N +I+  C     + A  +  +M+  G +P  VT   +++  C+  ++ +A  L+D MV
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G +P+   YN ++D  C   ++N A + F  +E  G + + V+Y  L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L  +M+ K I P V+TY+ L     +  +V  A +LF+EM R  +  D  TY++ I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLC +  I EA ++F  +    C  D+ +YN LI+G CK+ R++   +LF  +    LV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N VTYN +IQG    G +DKA++ F  M+    +PD+ T+++L+ G     E  K   +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 545 LHKMKEKKVMPDASIVSIVV 564
              M+++++  D    + V+
Sbjct: 423 FEDMQKREMDLDIVTYTTVI 442



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 185/365 (50%), Gaps = 1/365 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++ A  LF  M      P +V +N L+  +     ++    L  +M   G++  + TFN+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   ++  A  +L  M++ G  P+  T  +L++GFC   +++ A  L   M  +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D V+YN +I+  CK K V +A   ++E+  KGI+P VVTY  L  GL    +   A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M +  +  +  TY+  +D   KNG ++EA ELF  +  +  + DI  Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C   R+  A ++F  +     + +VV+YN +I G C   +++    LF +M +     + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL- 581
           +T++ LI GF +  +  K  E   +M    + PD    +I++  L  N    K+L  F  
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 582 VQERQ 586
           +Q+R+
Sbjct: 426 MQKRE 430



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%)

Query: 276 SVVTFNVIMDELCKNR----KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           S V+   + + L K R    K+++A  L   MV+    P+   +N L+     + K +  
Sbjct: 45  SSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV 104

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   ME +G ++D  ++NI+IN +C   +V  ALS+  +M+  G +P  VT  +L  G
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG 164

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
               ++V  A+ L D+M   G   D   Y   ID LCK   + +A + F+ +       +
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  L++GLC S R   A  L   +    + PNV+TY+ ++     +G++ +A++LF 
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +M   +  PD++T+  LI+G    +   + N++   M  K  + D
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  321 bits (823), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 174/487 (35%), Positives = 274/487 (56%), Gaps = 51/487 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNAT 90
           TR  DI +   N+A  +F  M++  P P  V  FN LL+++ K K YD       ++   
Sbjct: 59  TRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISLGKKMEVL 114

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +LYT+NI+INCFC   +VSL     G++L+                          
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK-------------------------- 148

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                     G EP+ +T  +L+NG CR      A++L ++M     EIG   KP+ V Y
Sbjct: 149 ---------LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVAY 193

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + IID LCK   V+ A   F +++ + I P+VVTY +L++GLC+++ W++A RL  +M+ 
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P+V+T++ ++D   KN K+ EA  L + MV+  + P+  TY++L++G CL  +I+ 
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDE 313

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++F  M S GC  D VSYN LING+CK K VE+ + L+REM  +G+    VTYNTL  
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G F+   V+ A + F +M   G++ D  TY   + GLC NG + +A+ +F  ++  + +L
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y  +I G+CK+G+++ AW LFCSL    L P++VTY  M+ GLC  G + +   L+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 511 LDMEENA 517
             M++  
Sbjct: 494 TKMKQEG 500



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 219/411 (53%), Gaps = 6/411 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ +A  LF+ +      P+++ +N L++ + +     + ++L ++M      +G+  + 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RN 118

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  T++ +I+  C    V  A ++  +M      PD VT  SL++G C  N  ++A  L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G +P +V +N I+D LCK +++++A      + ++G+RPN  TY  L++G C  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            + + A  L   M       + ++Y+ L++ + KN +V EA  L+ EMV   I P +VTY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L  GL    +++ A ++FD M   G  AD  +Y T I+G CK   + + ++LFR +  
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                +   YN LI G  ++G +  A E F  +    + P++ TYNI++ GLC++G+++K
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A  +F DM++     D++T+  +I G  +  +  +   L   +  K + PD
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 198/380 (52%), Gaps = 6/380 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF +M            P+ V ++ ++  + K    D   +L  +M+   I  D+ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N +I+  C     + A  +  +M+  G +P  VT   +++  C+  ++ +A  L+D MV
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G +P+   YN ++D  C   ++N A + F  +E  G + + V+Y  L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L  +M+ K I P V+TY+ L     +  +V  A +LF+EM R  +  D  TY++ +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLC +  I EA ++F  +    C  D+ +YN LI+G CK+ R++   +LF  +    LV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N VTYN +IQG    G +DKA++ F  M+    +PD+ T+++L+ G     E  K   +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 545 LHKMKEKKVMPDASIVSIVV 564
              M+++++  D    + V+
Sbjct: 423 FEDMQKREMDLDIVTYTTVI 442



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 185/365 (50%), Gaps = 1/365 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++ A  LF  M      P +V +N L+  +     ++    L  +M   G++  + TFN+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   ++  A  +L  M++ G  P+  T  +L++GFC   +++ A  L   M  +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D V+YN +I+  CK K V +A   ++E+  KGI+P VVTY  L  GL    +   A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M +  +  +  TY+  +D   KNG ++EA ELF  +  +  + DI  Y+ L++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C   R+  A ++F  +     + +VV+YN +I G C   +++    LF +M +     + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL- 581
           +T++ LI GF +  +  K  E   +M    + PD    +I++  L  N    K+L  F  
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 582 VQERQ 586
           +Q+R+
Sbjct: 426 MQKRE 430



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%)

Query: 276 SVVTFNVIMDELCKNR----KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           S V+   + + L K R    K+++A  L   MV+    P+   +N L+     + K +  
Sbjct: 45  SSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV 104

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   ME +G ++D  ++NI+IN +C   +V  ALS+  +M+  G +P  VT  +L  G
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG 164

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
               ++V  A+ L D+M   G   D   Y   ID LCK   + +A + F+ +       +
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  L++GLC S R   A  L   +    + PNV+TY+ ++     +G++ +A++LF 
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +M   +  PD++T+  L++G    +   + N++   M  K  + D
Sbjct: 285 EMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 196/496 (39%), Positives = 282/496 (56%), Gaps = 15/496 (3%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGL-FPNLYT 98
           T ++A   F  ML +HP PP + S N LL+S+ K KHY T       L++ G   P+L T
Sbjct: 35  TFDDAVSTFHRMLHLHP-PPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVT 93

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            +I IN    +G++ L F    +I++  F  +  T  +L+KGL  + R  EA  L+    
Sbjct: 94  LSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAV 153

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           + G   + + Y TLINGLC+ G T  A+ L  +M  G    GV  +PN + Y+ ++DGLC
Sbjct: 154 SKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG----GV--RPNLIMYNMVVDGLC 207

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGVQPSV 277
           KEG V +A  L  +M  + I  DV TYNSLIHG C A  +  A RL  EM M + V+P V
Sbjct: 208 KEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDV 267

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            TFN+++D LCK   + EA  +  LM++RG+ P+  + N LM+G+CL G ++ A+E+F  
Sbjct: 268 YTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDR 327

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G   + +SY+ LINGYCK K V+EAL L  EM  + + P  VTYN L  GL +  +
Sbjct: 328 MVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V +   L + M+  G A D  TY   +D   K   + +A+ LF+ +       +I+ YN 
Sbjct: 388 VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNI 447

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LIDGLCK GR+K A E+F  L      PN+ TYNIMI GL  +G +D+A  L L+M ++ 
Sbjct: 448 LIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDG 507

Query: 518 AAPDVITFDMLIHGFI 533
             P+ +TFD L+   +
Sbjct: 508 FPPNAVTFDPLVRALL 523



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 168/342 (49%), Gaps = 1/342 (0%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P +VT +  I+ L H      A  +  +++ +G      T   +M  LC   +  EA  L
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            D  V +G   +   Y TL++G C MGK   A EL   ME  G + + + YN++++G CK
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTR 418
              V EA  L  EMV KGI   V TYN+L  G     Q + A++L +EM  ++ V  D  
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+   +D LCK G + EA  +F  +     E D+ + N L++G C  G +  A E+F  +
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                +PNV++Y+ +I G C    +D+A  L  +M +    PD +T++ L+ G  +    
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
               +L+  M+     PD    ++++D  +K E   K+L  F
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALF 430


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 177/472 (37%), Positives = 271/472 (57%), Gaps = 14/472 (2%)

Query: 70  FNILLASLAKNKHYDTRLNATGLF-------PNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           FN LL++L K K Y+  ++   +        P+L T++ILIN F ++G++   F   G I
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L+  F  +     +L+KGL  + R++EA +L  +    G   + + Y T+INGLC+ G T
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+ +F +M        +   PN + Y+T+IDGLCK+G VD+A  L  +M +  I  DV
Sbjct: 192 RDAIQMFPKMKK------IRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDV 245

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            +YNS+IHG C    +  A +L  EM+ +G V P V TFN+++D LCK  ++ EA  ++ 
Sbjct: 246 YSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVA 305

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           +M++RG +P+  +YN LM+G+CL G +  A+++F  M       + +SY  LINGYCK +
Sbjct: 306 VMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVR 365

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V+EA+ L  EM +K + P  VTYN L  GL +  +  +   L + M+  G  AD  TY 
Sbjct: 366 MVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYN 425

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             +D   K+    +A+ LF+ +  +    +I+ YN L+DGLCKSGRLK+A E+F  L   
Sbjct: 426 VLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAK 485

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
              PN+ TYNIMI GLC +G +D+A  L   M  N   P+ ITFD ++   +
Sbjct: 486 GCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 169/345 (48%), Gaps = 1/345 (0%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I P ++T++ LI+          A  L   ++  G Q  V     +M  LC   ++ EA
Sbjct: 100 TIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEA 159

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             LL   V RG R +   Y T+++G C +GK   A ++F  M+ +    + + YN +I+G
Sbjct: 160 VSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDG 219

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ-RDGVAA 415
            CK   V+EA  L  EMV  GI+  V +YN++  G   + + + A+KL DEM  R  V  
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  T+   IDGLCK G + EA  +   +     + DI +YN L++G C SG +  A ++F
Sbjct: 280 DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVF 339

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +     +PNV++Y  +I G C    +D+A  L  +M      PD +T++ L+ G  + 
Sbjct: 340 DKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKS 399

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
                  +L+  M+      D    ++++D   K+E   K+L  F
Sbjct: 400 GRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALF 444



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           KP+ +T+S +I+   + G +  A +L   +       DV    +L+ GLC      EA  
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  E +D+G +   V +  I++ LCK  K  +A ++   M +  V PN   YNT++DG C
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTV 382
             G ++ A  L   M   G + D  SYN +I+G+C     + A+ L  EMV +G + P V
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            T+N L  GL ++ +V  A  +   M + G   D  +Y   ++G C +G + EA ++F  
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       ++ +Y  LI+G CK   +  A  L   + +  LVP+ VTYN ++ GL   G+
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
                DL   M  +    D+IT+++L+  + +  +  K   L   + E  + P+    +I
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 563 VVDLLVKN 570
           ++D L K+
Sbjct: 462 LLDGLCKS 469


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 182/552 (32%), Positives = 293/552 (53%), Gaps = 37/552 (6%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V ++  ++  L K + +D       ++   G+ PN+ TYN LI+ +  IG+      
Sbjct: 235 PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVR 294

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +      PN  T+ SL+  L    R  EA   F  +   G +P+V TY  +++G  
Sbjct: 295 MLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYA 354

Query: 178 RTG-----HTMIAL----------NLFEEMANGNGEIGVVCK--------------PNTV 208
             G     H ++ L          ++F    +   + G++ K              P+ V
Sbjct: 355 TKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAV 414

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +Y  +ID LCK G VD A+  F QM +E + PD+V ++SL++GLC  + W + + LF EM
Sbjct: 415 SYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           ++ G+ P++V FN I+  LCK  ++ E  RL+D +   GVRP+  +YNTL+DG CL G I
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A +L   M S+G K D  SYN L++GYCK   ++ A S +R+M+S GI P VVTYNT+
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GLF+  +   A +L+  M   G   D  TY   ++GLCK+  + EA+++F+ L     
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           +L+I  +N +I  L K GR + A +LF ++P   LV NVVTY ++++ L  +G +++   
Sbjct: 655 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  ME+N  AP+    + L+   +   + S+    L K+ E+    +AS  S+++ +  
Sbjct: 715 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFS 774

Query: 569 KNEIS--LKSLP 578
            +E     KSLP
Sbjct: 775 SDEYQHHAKSLP 786



 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 171/526 (32%), Positives = 274/526 (52%), Gaps = 21/526 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT----GLF----------- 93
           +A  +FD +L  H  P  V +FN LLA+++++    +  + +     LF           
Sbjct: 32  DALKLFDELLP-HARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKV 90

Query: 94  -PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA- 151
            PN  TY+ILI CFC++G +  GF AFG IL++ +  +    N L+ GL    R+ EA  
Sbjct: 91  APNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMD 150

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L  ++   GC P+ ++YN L+ GLC       AL L   MA+   +    C PN V+YS
Sbjct: 151 VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMAD---DQVWSCPPNVVSYS 207

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+G   EG VDK   LFL+M D  I PDVVTY ++I GLC A  ++ A+ +F +M+D 
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN 267

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           GV+P++ T+N ++       K  E  R+L+ M   G +PN CTY +L++  C  G+   A
Sbjct: 268 GVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA 327

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
              F SM   G K    +Y I+++GY     + E   L   MV+ GI P    +N  F  
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSA 387

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +   ++ A+ +F++M++ G++ D  +Y   ID LCK G + +A   F  +       D
Sbjct: 388 YAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  ++ L+ GLC   + +   ELF  + +  + PN+V +N ++  LC +G++ + + L  
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVD 507

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +E     PDVI+++ LI G        + ++LL  M    + PD+
Sbjct: 508 SIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 171/650 (26%), Positives = 284/650 (43%), Gaps = 147/650 (22%)

Query: 70   FNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
            FNI  ++ AK    +K  D   ++   GL P+  +Y  LI+  CK+GRV    + F +++
Sbjct: 381  FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 124  RSCFTPNAATFNSLIKGL---------------------H--------------AESRIM 148
                TP+   F+SL+ GL                     H               E R+M
Sbjct: 441  NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 149  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            E   L   ++  G  P+VI+YNTLI+G C  G    A  L E      G + V  KP++ 
Sbjct: 501  EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE------GMVSVGLKPDSF 554

Query: 209  TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL---------------- 252
            +Y+T++ G CK G +D A + F +M    I P VVTYN+++HGL                
Sbjct: 555  SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 253  -------------------CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
                               C +N  +EA ++F  +  +G+Q +++TFN+++  L K  + 
Sbjct: 615  INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 294  DEA-----------------------------------SRLLDLMVQRGVRPNACTYNTL 318
            ++A                                     L   M + G  PN+   N L
Sbjct: 675  EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 734

Query: 319  MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC-------------------- 358
            +      G I+RA      ++      +  + ++LI+ +                     
Sbjct: 735  VRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNE 794

Query: 359  --------KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
                    K + +++A SL+REM+ KG+ P VVTYNT+  GLF+  +   A +L+  M  
Sbjct: 795  ANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 854

Query: 411  DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
                 +  TY   ++GLCK+  + EA ++F++L     +L+I  +N +I  L K GR + 
Sbjct: 855  SRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKED 914

Query: 471  AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
            A +LF ++P   LVP+VVTY ++ + L  +G +++   LFL ME++    D    + L+ 
Sbjct: 915  AMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVR 974

Query: 531  GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS--LKSLP 578
              ++  + S+    L K+ EK    +AS  S ++ L  + E     KSLP
Sbjct: 975  RLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLP 1024



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 153/319 (47%), Gaps = 4/319 (1%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P+  T+++++   C+   ++       L+++ G R +    N L++G C   ++  A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 333 E-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI---KPTVVTYNTL 388
           + L   M  +GC  D VSYNIL+ G C  K  EEAL L   M    +    P VV+Y+T+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G F   QV+    LF EM   G+  D  TYTT IDGLCK      A  +F+ +     
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + +I  YNCLI G    G+ K    +   +  G   PN  TY  ++  LC +G+  +AR 
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
            F  M      P V T+ +++HG+      S++++LL+ M    + P+  I +I      
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 569 KNEISLKSLPSFLVQERQG 587
           K  I  K++  F    +QG
Sbjct: 390 KCGIIDKAMDIFNKMRQQG 408



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 172/411 (41%), Gaps = 34/411 (8%)

Query: 67   VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
            + ++NI+L  L K+   D        L + GL  N+ T+NI+I    K GR       F 
Sbjct: 623  IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682

Query: 121  RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
             I  +    N  T+  +++ L  E  + E  +LF+ ++  G  PN    N L+  L   G
Sbjct: 683  AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742

Query: 181  HTMIALNLFEEMANGNGEIGVVCKP-------------------------NTVTYSTIID 215
                A     ++   N  +                               N    S +I 
Sbjct: 743  DISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIK 802

Query: 216  GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
               K   +D A +LF +M  + + PDVVTYN+++HGL     ++EAK L++ M++   Q 
Sbjct: 803  ---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 859

Query: 276  SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            ++ T+N+I++ LCK+  +DEA ++   +  +G++ N  T+N ++      G+   A +LF
Sbjct: 860  NIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 919

Query: 336  GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ++ + G   D V+Y ++     +   +EE   L+  M   G        N L   L + 
Sbjct: 920  AAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQR 979

Query: 396  HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
              +  A     ++     + +  T +  I    +  Y   A  L    R+L
Sbjct: 980  GDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLL 1030


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  318 bits (815), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 192/566 (33%), Positives = 296/566 (52%), Gaps = 19/566 (3%)

Query: 10   SFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSS 69
            ++ +A   +  F    ++ +V       R GD        A   FD+            +
Sbjct: 794  AWEYAETALERFTGKLTTTVVGKVLQGVRNGD-------AALGFFDWATSQEGYNHDTYT 846

Query: 70   FNILLASLAKNKHYDTRL----NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
             N LL +L + K     L    N     PN++T+ ILI+  C+ G +   +     + R 
Sbjct: 847  CNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRH 906

Query: 126  CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTMI 184
                N    N +IKGL +  ++  A  LF +++  G C P+V TY+T+++ L ++G    
Sbjct: 907  GVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 966

Query: 185  ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
            A  L E+M +        C PN VTYS+++ GLCK G +D+A AL  +M     +P++VT
Sbjct: 967  ACRLVEDMVSKG------CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 1020

Query: 245  YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            YN++I G C     +EA  L  EM+D G QP+VVT+ V++D  CK  K ++A  L+++MV
Sbjct: 1021 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 1080

Query: 305  QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            ++G  PN  TYN+L+D FC   ++ RA +L  SM   GC  + VSYN +I G CK  +V 
Sbjct: 1081 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 1140

Query: 365  EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            E + L  +M+S    P +VT+NT+   + + ++V+ A +LF+ +Q  G   +  TY + +
Sbjct: 1141 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 1200

Query: 425  DGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
             GLCK+    +A  L R + R   C  DI  YN +IDGLCKS R+  A++LF  +    L
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260

Query: 484  VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             P+ VTY+I+I  LC    MD+A ++   M +N   P  IT+  LI GF +     K  E
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 544  LLHKMKEKKVMPDASIVSIVVDLLVK 569
            +L  +  K   PD    SI +D L K
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSK 1346



 Score =  294 bits (753), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 263/500 (52%), Gaps = 7/500 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+  TYN +IN   K  R+         ++ + F PN  ++N+++ G    +R+  A  L
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   GC P+V++Y T+INGLC+      A  + ++M      I   C+PN +TY T+
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM------IQRGCQPNVITYGTL 341

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +DG C+ G +D A  L  +M +    P+ +TYN+++H  C  ND   A ++   M+  G 
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGC 401

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P  + ++ I+   CK  K+ EA  LL+ M++RG RP+    +TL+D  C    I+ A+E
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L      M C  D V+Y+ILI+  CK K + EA S    MV     P VVTYN++  GL 
Sbjct: 462 LLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLC 521

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  ++  A  LFD M+  GV  D  TY+  I   CK+  +  A ++   ++  KC  D+ 
Sbjct: 522 KSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVV 581

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y+ LI+GLCK+G +  A+++F  +      PN+VTYN +I GLC   ++++A ++   M
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
            + +  PD IT+  LI+G    +   +   +L +MK+K  +PD      ++  L K   +
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTN-N 700

Query: 574 LKSLPSFLVQERQGEVGESN 593
           L+ +   L +    E G+ N
Sbjct: 701 LELVEQLLKEMEATEEGQWN 720



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/544 (32%), Positives = 283/544 (52%), Gaps = 24/544 (4%)

Query: 38   REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------AT 90
            R GDI       A+ +   M R H  P  V   N+++  L   +  D+ L        + 
Sbjct: 889  RAGDIGT-----AYELLKEMPR-HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 91   GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
               P+++TY+ +++   K G+V         ++    +PN  T++SL+ GL    ++ EA
Sbjct: 943  SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002

Query: 151  AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             AL  ++   GC PN++TYNT+I+G C+ G    A +L EEM +G       C+PN VTY
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG------CQPNVVTY 1056

Query: 211  STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            + ++D  CK G  + A  L   M ++   P++ TYNSL+   C  ++   A +L   M+ 
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116

Query: 271  QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            +G  P+VV++N ++  LCK  K+ E   LL+ M+     P+  T+NT++D  C   +++ 
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176

Query: 331  AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLF 389
            A ELF  ++  GC  + V+YN L++G CK++  ++A  L REM  K G  P ++TYNT+ 
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236

Query: 390  LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             GL +  +V+ A KLF +M  DG+A D  TY+  I  LCK  ++ EA  +   +  LK  
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM--LKNG 1294

Query: 450  LDIQA--YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
             D  A  Y  LIDG CK+G L  A E+   L      P+VVT++I I  L   G++ +A 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 508  DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +L   M      PD +T++ L+ GF   +      +L   M++    PD +  + +V  L
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414

Query: 568  VKNE 571
            V  +
Sbjct: 1415 VDKK 1418



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/490 (31%), Positives = 255/490 (52%), Gaps = 7/490 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G    ++  N L+N   K  + S     F   +   +  +  T+++LI G     +I+ A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF ++   G + +   + +++ GLC  G    A+  F EM+         C P++VTY
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-------TCPPDSVTY 233

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I+GL K   +D A  L  +M D    P+V +YN+++HG C AN    A  L  +M+ 
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P VV++  +++ LCK  ++DEA R++D M+QRG +PN  TY TL+DGFC +G ++ 
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 353

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A EL   M   G + + ++YN +++ +C+  ++E A  + + M+  G  P  + Y+T+  
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +  ++  A  L ++M R G   D    +T ID LCK   I  A EL R    + C  
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+ AY+ LI  LCK+ RL  A      +      P+VVTYN ++ GLC   +++ A  LF
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLF 533

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M      PDV+T+ ++IH F + N      ++L +MKE K +PD    S +++ L K 
Sbjct: 534 DRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKA 593

Query: 571 EISLKSLPSF 580
               K+   F
Sbjct: 594 GTVDKAFDVF 603



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 252/492 (51%), Gaps = 12/492 (2%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++  L+K+   D  +         G  PN+++YN +++ FCK  RV     
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 286

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              +++     P+  ++ ++I GL    ++ EA  +  K+   GC+PNVITY TL++G C
Sbjct: 287 LLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 346

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R G    A+ L  +M     E G   +PN +TY+ I+   C+   +++A  +   M    
Sbjct: 347 RVGDLDGAVELVRKMT----ERGY--RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD + Y+++I G C A    EA  L  +M+ +G +P V   + ++D LCK   +D A 
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL + +     P+   Y+ L+   C   ++  AE     M    C  D V+YN +++G 
Sbjct: 461 ELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGL 520

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK++ + +A  L+  M + G+ P VVTY+ +     + + ++ A K+ + M+      D 
Sbjct: 521 CKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDV 580

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY+  I+GLCK G + +A ++F+ +    C  ++  YN LIDGLCK  +++ A E+   
Sbjct: 581 VTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEI 640

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      P+ +TY  +I GLCN  ++++A  +  +M++    PD +T+  L+    + N 
Sbjct: 641 MRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNN 700

Query: 538 PSKVNELLHKMK 549
              V +LL +M+
Sbjct: 701 LELVEQLLKEME 712



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 268/531 (50%), Gaps = 41/531 (7%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V ++ +LL +  K    +  +         G  PNL+TYN L++ FCK   V      
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               +++    PN  ++N++I GL   +++ E   L  ++ +  C P+++T+NT+I+ +C+
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDEN 237
            T    IA  LF  +          C PN VTY++++ GLCK    D+A+ L  +M + + 
Sbjct: 1171 TYRVDIAYELFNLIQESG------CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 1224

Query: 238  INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             +PD++TYN++I GLC +   + A +LF++M+  G+ P  VT+++++  LCK R MDEA+
Sbjct: 1225 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 1284

Query: 298  RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
             +L+LM++ G  P A TY TL+DGFC  G +++A E+   + S G   D V+++I I+  
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344

Query: 358  CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
             K   + +A  L   M+  G+ P  VTYNTL  G  +    E A+ LF+ M++ G   D 
Sbjct: 1345 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404

Query: 418  RTYTTFIDGLC-KNGYIIEAVELFRTL----------------RILKCELDIQAYNCLID 460
             TYTT +  L  K  Y     E+ +++                  ++ E D++    ++D
Sbjct: 1405 ATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVD 1464

Query: 461  GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
               K G  + A ++F     G+   NVV ++ M+       Q ++A  L+  M      P
Sbjct: 1465 MFGKCGSPQDARKVF----EGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEP 1520

Query: 521  DVITF----DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            D +TF     M  H  +     + V+E +   ++  + P     S V+DLL
Sbjct: 1521 DAVTFLSLLTMCCHAGLL---DAAVDEFVSISRDYGLEPGVDHFSCVIDLL 1568



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 1/334 (0%)

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            +P++ T+  LIHGLC A D   A  L  EM   GV  +V+  NV++  LC  RK+D A  
Sbjct: 874  SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933

Query: 299  LLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M + G   P+  TY+T++D     GK++ A  L   M S GC  + V+Y+ L++G 
Sbjct: 934  LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993

Query: 358  CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            CK  +++EA +L + M   G  P +VTYNT+  G  ++ +++ A  L +EM   G   + 
Sbjct: 994  CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 1053

Query: 418  RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             TYT  +D  CK G   +A+ L   +       ++  YN L+D  CK   ++ A +L  S
Sbjct: 1054 VTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 1113

Query: 478  LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
            +     VPNVV+YN +I GLC   ++ +   L   M  N   PD++TF+ +I    +   
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR 1173

Query: 538  PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
                 EL + ++E    P+    + +V  L K+ 
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/583 (25%), Positives = 254/583 (43%), Gaps = 66/583 (11%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            N+AF +FD M R     P V +++I++ S  K+ + D+      R+      P++ TY+ 
Sbjct: 527  NDAFLLFDRM-RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSA 585

Query: 102  LINCFCKIGRVSLGFIAFGRIL------------------------------------RS 125
            LIN  CK G V   F  F  +L                                    +S
Sbjct: 586  LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645

Query: 126  CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
            C TP++ T+  LI GL   SR+ EA  +  ++K  GC P+ +TY TL+  L +T +  + 
Sbjct: 646  C-TPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELV 704

Query: 186  LNLFEEM---------ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
              L +EM         ANG      V + + +  +  +          + + L  + +  
Sbjct: 705  EQLLKEMEATEEGQWNANGARLHRFVIRGDVLMMAMAVP---MAALTSQTRVLDSKDQQG 761

Query: 237  NINPDV----VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ--PSVVTFNVIMDELCKN 290
              +P      VT  +   G  H        R   E  +  ++     +T  V+   L   
Sbjct: 762  QFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGV 821

Query: 291  RKMDEASRLLDLMV-QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
            R  D A    D    Q G   +  T N L+     + +   A +++ +   + C  +  +
Sbjct: 822  RNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFT 879

Query: 350  YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
            + ILI+G C+  ++  A  L +EM   G+   V+ +N +  GL    +++ AL+LF EM+
Sbjct: 880  FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939

Query: 410  RDG-VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G    D  TY+T +D L K+G + +A  L   +    C  ++  Y+ L+ GLCK+G+L
Sbjct: 940  ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999

Query: 469  KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
              A  L   +      PN+VTYN +I G C  G++D+A  L  +M +    P+V+T+ +L
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059

Query: 529  IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +  F +  +      L+  M EK  +P+    + ++D+  K +
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 1102



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 156/394 (39%), Gaps = 73/394 (18%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
            + A+ +F  ML    +P  V+ ++I+++SL K +  D   N        G  P   TY  
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVT-YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 1304

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            LI+ FCK G +         +L     P+  TF+  I  L    R+ +A  L   +   G
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 1364

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC-KE 220
              P+ +TYNTL+ G C    T  A++LFE M          C+P+  TY+T++  L  K+
Sbjct: 1365 LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG------CEPDNATYTTLVGHLVDKK 1418

Query: 221  GFVDKAKALFLQMKDEN----------------INPDVVTYNSLIHGLCHANDWNEAKRL 264
             + D    +   M D                  +  DV    +++          +A+++
Sbjct: 1419 SYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKV 1478

Query: 265  FIEMMDQ--------------------------------GVQPSVVTFNVIMDELCKNRK 292
            F E MDQ                                GV+P  VTF  ++   C    
Sbjct: 1479 F-EGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGL 1537

Query: 293  MDEA-SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +D A    + +    G+ P    ++ ++D    +G +N AE+L   M  M CK    ++N
Sbjct: 1538 LDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWN 1594

Query: 352  ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
             L++ Y    + E AL +        + PT  +Y
Sbjct: 1595 CLLSAYKICGDFERALRVAE------LNPTQASY 1622


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  318 bits (815), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 172/487 (35%), Positives = 272/487 (55%), Gaps = 51/487 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNAT 90
           TR  DI +   ++A  +F  M++  P P  V  FN LL+++ K K YD       ++   
Sbjct: 59  TRLRDIKL---HDAINLFREMVKTRPFPSIVD-FNRLLSAIVKMKKYDVVISLGKKMEVL 114

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +LYT+NI+INCFC   +VSL     G++L+                          
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLK-------------------------- 148

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                     G EP+ +T  +L+NG CR      A++L ++M     EIG   +P+ V Y
Sbjct: 149 ---------LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--RPDIVAY 193

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + IID LCK   V+ A   F ++  + I P+VVTY +L++GLC++  WN+A RL  +M+ 
Sbjct: 194 NAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK 253

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P+V+T++ ++D   KN K+ EA  + + MV+  + P+  TY++L++G CL  +I+ 
Sbjct: 254 RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++F  M S GC  D VSYN LING+CK K VE+ + L+R+M  +G+    VTYNTL  
Sbjct: 314 ANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQ 373

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G F++  V+ A + F +M   GV+ D  TY   + GLC NG + +A+ +F  ++  + +L
Sbjct: 374 GFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDL 433

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y  +I G+CK+G+++ AW LFCSL    L P++VTY  M+ GLC  G   +   L+
Sbjct: 434 DIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALY 493

Query: 511 LDMEENA 517
             M++  
Sbjct: 494 TKMKQEG 500



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 243/459 (52%), Gaps = 12/459 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+   FN L+  +    +     +L  K++  G   ++ T+N +IN  C      +AL++
Sbjct: 83  PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E      P+ VT  ++++G C+   V  A +L  +M +    PD+V YN++
Sbjct: 143 LGKMLKLGYE------PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAI 196

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I  LC     N+A   F E+  +G++P+VVT+  +++ LC + + ++A+RLL  M++R +
Sbjct: 197 IDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI 256

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            PN  TY+ L+D F   GK+  A+E+F  M  M    D V+Y+ LING C +  ++EA  
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++  MVSKG  P VV+YNTL  G  +  +VE  +KLF +M + G+  +T TY T I G  
Sbjct: 317 MFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFF 376

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           + G + +A E F  +       DI  YN L+ GLC +G L+ A  +F  +    +  ++V
Sbjct: 377 QVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIV 436

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY  +IQG+C  G+++ A  LF  +      PD++T+  ++ G        +V  L  KM
Sbjct: 437 TYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKM 496

Query: 549 KEKKVMPDASIVSI------VVDLLVKNEISLKSLPSFL 581
           K++ +M + S++ +      +   L+K  +S    PS L
Sbjct: 497 KQEGLMKNDSMLCLGDGDITISAELIKKMLSCGYAPSLL 535



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 180/352 (51%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           LF +M      P +V +N L+  +     ++    L  +M   G++  + TFN++++  C
Sbjct: 72  LFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
              ++  A  +L  M++ G  P+  T  +L++GFC   +++ A  L   M  +G + D V
Sbjct: 132 CCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIV 191

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN +I+  CK + V +AL  ++E+  KGI+P VVTY  L  GL    +   A +L  +M
Sbjct: 192 AYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM 251

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            +  +  +  TY+  +D   KNG ++EA E+F  +  +  + DI  Y+ LI+GLC   R+
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A ++F  +      P+VV+YN +I G C   +++    LF  M +     + +T++ L
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTL 371

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           I GF ++ +  K  E   +M    V PD    +I++  L  N +  K+L  F
Sbjct: 372 IQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIF 423



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 4/286 (1%)

Query: 276 SVVTFNVIMDELCKNR----KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           S V+   + + L K R    K+ +A  L   MV+    P+   +N L+     M K +  
Sbjct: 45  SSVSGGDLRERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVV 104

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   ME +G ++D  ++NI+IN +C   +V  ALS+  +M+  G +P  VT  +L  G
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNG 164

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
               ++V  A+ L D+M   G   D   Y   ID LCK   + +A++ F+ +       +
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPN 224

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  L++GLC SGR   A  L   +    + PNV+TY+ ++     +G++ +A+++F 
Sbjct: 225 VVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFE 284

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           +M   +  PD++T+  LI+G    +   + N++   M  K   PD 
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDV 330



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++NILL  L  N   +  L        + +  ++ TY  +I   CK G+V   +  
Sbjct: 398 PDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGL 457

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           F  +      P+  T+ +++ GL  +    E  AL+TK+K  G   N
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 168/494 (34%), Positives = 278/494 (56%), Gaps = 8/494 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++  GL P+   Y +L++  CK GR +     F  ++R    P+   +  L+ G   E  
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E  +    +   G  P+   +N + N   +      A+++F++M            P 
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ------WLSPG 376

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y  +ID LCK G VD A   F QM +E + PD+  ++SL++GLC  + W +A++LF 
Sbjct: 377 VVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFF 436

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           E++DQG++ +   FN++M  LC+  ++ EA RL+DLM++  VRP+  +YNTL+DG CL G
Sbjct: 437 EVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTG 496

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I+ A +L   M S+G K D+ +YN L++GYCK + +++A SL+REM+ KG+ P VVTYN
Sbjct: 497 RIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYN 556

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF+I +   A +L+  M  +    D  TYT  ++GLC+N ++ EA ++F++L   
Sbjct: 557 TILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +LDI   N +I  L K GR + A +LF ++    LVP+V TY ++ + L  +G +++ 
Sbjct: 617 DLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEEL 676

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +LF  MEEN  AP+    + L+   +   +  +    L K+ EK    +AS  S+++ +
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISI 736

Query: 567 LVKNEIS--LKSLP 578
             + E     KSLP
Sbjct: 737 YSRAEYQQLAKSLP 750



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/573 (30%), Positives = 280/573 (48%), Gaps = 55/573 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------------PN 95
           ++A  +FD ML  +  P  V +FN LL  +++ +          LF            P+
Sbjct: 33  DDALKLFDEML-TYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFT-PNAATFNSLIKGLHAESRIMEAA-AL 153
             TY ILI CFC++GR+  GF AFG IL++ ++  N   F  L+KGL    R+ EA   L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN-GNGEIGVVCKPNTVTYST 212
             ++  FGC  NVI+YN L+ GLC       AL L   MA+ G+G       PN VTY+T
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGS----HTPNVVTYTT 207

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDGLCK   VD+AK +F  M D+ + P+  TY  LIHG      W E  ++  EM   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG 267

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           +QP  V + V++D LCKN +  EA  + D ++++G++P+   Y  L+ G+   G ++   
Sbjct: 268 LQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMH 327

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
                M   G   D   +NI+ N Y K   ++EA+ ++ +M  + + P VV Y  L   L
Sbjct: 328 SFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDAL 387

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG-------------------------- 426
            ++ +V+ A+  F++M  +GV  D   +++ + G                          
Sbjct: 388 CKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNA 447

Query: 427 ---------LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
                    LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR+  A +L   
Sbjct: 448 AFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L P+  TYN ++ G C   ++D A  LF +M      P V+T++ ++HG  +I  
Sbjct: 508 MVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGR 567

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +  EL   M   +   D    +I+++ L +N
Sbjct: 568 FCEAKELYLNMINNRRKCDIYTYTIILNGLCRN 600



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 46/254 (18%)

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH---QVEHALKLFDEMQRD---GVAAD 416
           +++AL L+ EM++     +V T+N L   +         E  + LF+ M R+    VA  
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 417 TRTYTTFI------------------------------------DGLCKNGYIIEAVE-L 439
           + TYT  I                                     GLC    + EA + L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP---HGVLVPNVVTYNIMIQG 496
            R +    C L++ +YN L+ GLC   R + A EL   +     G   PNVVTY  +I G
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LC    +D+A+ +F  M +    P+  T+  LIHG++   +  +V ++L +M    + PD
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 557 ASIVSIVVDLLVKN 570
             I ++++D L KN
Sbjct: 272 CVIYAVLLDYLCKN 285



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 13/187 (6%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL---RILKCELDIQA 454
           ++ ALKLFDEM      A  RT+   +  +        A EL  +L    I +C + +  
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLT-VVSRARCSSASELVVSLFNRMIRECSVKVAP 90

Query: 455 YNC----LIDGLCKSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +C    LI   C+ GRLK  +  F   L  G  + N V +  +++GLC+  ++D+A D+
Sbjct: 91  SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDI 150

Query: 510 FL-DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK---KVMPDASIVSIVVD 565
            L  M E     +VI++++L+ G        +  EL+H M +       P+    + V+D
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVID 210

Query: 566 LLVKNEI 572
            L K ++
Sbjct: 211 GLCKAQM 217


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 182/564 (32%), Positives = 293/564 (51%), Gaps = 40/564 (7%)

Query: 55  DYMLRMHPS---PPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNIL 102
           D +L+  P     P   S++ILL         +  L    +          PN+ TY  +
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK          F +++ +   PN  T+N LI G  +  +  E   +  K+ A G 
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 163 EPNVITYNTLINGLCRTG--HTMIAL----------NLFEEMANGNGEIGVVCK------ 204
           +P+  TY +L+N LC     H+ + L          ++F    +   + G++ K      
Sbjct: 274 KPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 333

Query: 205 --------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   PN V Y  +ID LCK G VD A+  F QM +E + P++V +NSL++GLC  +
Sbjct: 334 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 393

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
            W  A+ L  EM+DQG+ P+ V FN ++  LC   ++ E  RL+DLM   GVRP+A +Y 
Sbjct: 394 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 453

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L+ G+CL G+ + AE++F  M S+G    +V+YN L++GYC    +++A  L+REM+ K
Sbjct: 454 PLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK 513

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+ P VVTYNT+  GLF+  +   A +L+  M   G   D  TY   ++GLCK+  + EA
Sbjct: 514 GVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEA 573

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            ++F++L     +L+I  +  +I  L K GR + A +LF ++P   LVPNVVTY ++ + 
Sbjct: 574 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 633

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L  +G +++   LF  ME+N  AP+    + L+   +   + S+    L K+ E+    +
Sbjct: 634 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 693

Query: 557 ASIVSIVVDLLVKNEIS--LKSLP 578
           AS  S+++ +   +E     KSLP
Sbjct: 694 ASTTSLLISIFTSDEYQHHAKSLP 717



 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 274/555 (49%), Gaps = 31/555 (5%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------------ 84
            R G + +   ++A  +FD +L +H  P  V +FN +L ++++                 
Sbjct: 23  ARSGSLGL---DDALKLFDELL-IHARPASVVAFNQILNAVSRASRASGRRSSSTSESEL 78

Query: 85  --------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
                    R  +  + PN  TY+ILI C C++GR+   F  FG IL++ +  N    N 
Sbjct: 79  VVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQ 138

Query: 137 LIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           L+KGL    R+ EA   L  ++   GC P+ ++Y+ L+ G C       AL L   MAN 
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
           +G     C PN VTY+T+IDGLCK    D+A+ +F QM D  + P+  TYN LIHG    
Sbjct: 199 HGR---SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSI 255

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
             W E  ++  +M  +G++P   T+  +++ LC    + E    LDLMV+ G+ P+   +
Sbjct: 256 GKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIF 312

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N     +   G I++A ++F  M   G   + V+Y  LI+  CK   V++A   + +M++
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 372

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G+ P +V +N+L  GL  + + E A +L  EM   G+  +   + T I  LC  G ++E
Sbjct: 373 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 432

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
              L   +  +    D  +Y  LI G C +GR   A ++F  +    L P  VTYN ++ 
Sbjct: 433 GRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 492

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C+  ++D A  LF +M      P V+T++ ++HG  +    S+  EL   M       
Sbjct: 493 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC 552

Query: 556 DASIVSIVVDLLVKN 570
           D    +I+++ L K+
Sbjct: 553 DIYTYNIILNGLCKS 567


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 184/567 (32%), Positives = 301/567 (53%), Gaps = 45/567 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD      ++A+  +  ML    SP  V+ ++ ++A+L K +  D      T +   G
Sbjct: 208 KEGD-----SDKAYSTYHEMLDRRISPDVVT-YSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 92  LFPNLYTYNILINCFC--KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  +  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLK--KMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTG-----HTMIALNL---------------- 188
           A  +F  +   G EP++ TY TL+ G    G     H ++ L +                
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 189 -FEEMANGNGEIGVVCK-------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            + +    +  + V  K       PN VTY  +I  LCK G VD A   F QM DE + P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++ Y SLIH LC  + W++A+ L +EM+D+G+  + + FN I+   CK  ++ E+ +L 
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLMV+ GV+PN  TY+TL+DG+CL GK++ A +L  SM S+G K D V+YN LINGYC+ 
Sbjct: 500 DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRV 559

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +++AL+L++EMVS G+ P ++TYN +  GLF   +   A +L+  + + G   +  TY
Sbjct: 560 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR   A +LF +   
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSS 679

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVPN  TY +M + +   G +++   LF  ME+N    D    + ++   ++  E ++
Sbjct: 680 NGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITR 739

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
               L  + EK    +AS  S+ +DLL
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLFIDLL 766



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 180/611 (29%), Positives = 290/611 (47%), Gaps = 83/611 (13%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P ++TY 
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI C C+ GR+ LGF A G +++  F   A TF  L+KGL A+ R  +A  +   ++  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
             C P+V +   L+ GLC    +  AL L   MA+  G       P+ V+Y+T+I+G  K
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTTVINGFFK 208

Query: 220 EGFVDKAKALFLQMKDENINPDVV-----------------------------------T 244
           EG  DKA + + +M D  I+PDVV                                   T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YNS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA ++ D M 
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RG+ P+  TY TL+ G+   G +     L   M   G   D   +NILI  Y K ++V+
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+ ++ +M   G+ P VVTY  +   L +   V+ A+  F++M  +G+  +   YT+ I
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 425 DGL-----------------------------------CKNGYIIEAVELFRTLRILKCE 449
             L                                   CK G +IE+ +LF  +  +  +
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVK 508

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y+ LIDG C +G++  A +L  S+    + P+ VTYN +I G C   +MD A  L
Sbjct: 509 PNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALAL 568

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M  +  +P++IT+++++ G       +   EL   + +     + S  +I++  L K
Sbjct: 569 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628

Query: 570 NEISLKSLPSF 580
           N ++ ++L  F
Sbjct: 629 NNLTDEALRMF 639



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 188/427 (44%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP       FNIL+ + AK +  D      +++   GL PN+ TY 
Sbjct: 354 EMHALLDLMVRNGIHPDH---HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK G V    + F +++    TPN   + SLI  L                   
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470

Query: 142 -------------HA---ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                        H+   E R++E+  LF  +   G +PNVITY+TLI+G C  G    A
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L   M        V  KP+ VTY+T+I+G C+   +D A ALF +M    ++P+++TY
Sbjct: 531 TKLLSSM------FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL H      AK L++ +   G Q  + T+N+I+  LCKN   DEA R+   +  
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 644

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++    T+N ++     +G+ + A++LF +  S G   +  +Y ++         +EE
Sbjct: 645 TDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N +   L +  ++  A      +     + +  T + FID
Sbjct: 705 LDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 765 LLSGGKY 771



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 145/334 (43%), Gaps = 41/334 (12%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG---VRPNACTYN 316
           +A+ +F E++ +G   S+   N  + ++ ++      SR  + M + G   V P   TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYG 91

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL-YREMVS 375
            L+   C  G+++      G++   G + + +++  L+ G C +K   +A+ +  R M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRTYTTFIDGLCKNGYI 433
               P V +   L  GL + ++ + AL+L   M   R G +A                  
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP----------------- 194

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
                            D+ +Y  +I+G  K G    A+  +  +    + P+VVTY+ +
Sbjct: 195 -----------------DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSI 237

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  LC    MDKA ++   M +N   P+ +T++ ++HG+    +P +    L KM+   V
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            PD    + ++D L KN  S ++   F    ++G
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 169/524 (32%), Positives = 274/524 (52%), Gaps = 47/524 (8%)

Query: 67  VSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++ I++  L K         Y  ++   G  PN +TYN+LIN FCK+ +V   ++   
Sbjct: 7   VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR-- 178
            +  S   PN  T++++I G   ++++  A  LF ++   GC PN++TYNTL++GLCR  
Sbjct: 67  EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126

Query: 179 ---------------------------------TGHTMIALNLFEEMANGNGEIGVVCKP 205
                                            TG   +AL +FE+ +NG+      C P
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD------CPP 180

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + V YST+I GLCK G +D+A  LF +M++ +  PDVVT+ +L+ GLC  +   EA+++ 
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M D+   P+V+T++ ++D LCK  ++ +A  +   M+ RG+ PN  TYN+L+ GFC+ 
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
             ++ A  L   M + GC  D ++YN LI+G CK     EA  L+ +M +K   P V+TY
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           + L  G  ++ +++ A  LFD+M +  V  D  T++T ++G C  G + +A  L   +  
Sbjct: 361 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 420

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  D+  Y  L+DG CK GR+  A  +   +      PNVVTY  +I   C  G+   
Sbjct: 421 SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTV 480

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           A  L  +M  N   P+VIT+  LI GF    +  +  ++L +++
Sbjct: 481 AYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524



 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 158/475 (33%), Positives = 261/475 (54%), Gaps = 6/475 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ T+ I+I+  CK  R+      F ++ +    PN  T+N LI G     ++  A  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++K  G  PNV+TY+T+I+G CR      A  LF +M   NG     C PN VTY+T++
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVTYNTLL 119

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLC+ G +D+A  L  +M++  + PD  +Y++L+ GLC     + A ++F +  +    
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 179

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P VV ++ ++  LCK  ++DEA +L + M +    P+  T+  LMDG C   ++  A+++
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
             +ME   C  + ++Y+ LI+G CK  +V +A  +++ M+ +GI+P VVTYN+L  G   
Sbjct: 240 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            + V+ AL L +EM   G   D  TY T IDGLCK G   EA  LF  ++   C  D+  
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 359

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y+CLI G CK  R+  A  LF  +    ++P+VVT++ +++G CN G +D A  L  +M 
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 419

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +PDV T+  L+ GF ++    +   +L +M ++   P+    + ++D   +
Sbjct: 420 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 474



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 144/404 (35%), Positives = 227/404 (56%), Gaps = 6/404 (1%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           CE NVIT+  +I+GLC+      A   F +M       G V  PN  TY+ +I+G CK  
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKVH 56

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A  L  +MK+  + P+VVTY+++IHG C     + A +LF +M++ G  P++VT+N
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  LC+N  MDEA  LLD M +RG++P+  +Y+TLM G C  GKI+ A ++F    + 
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
            C  D V+Y+ LI G CK   ++EA  L+ +M     +P VVT+  L  GL +  +++ A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++ + M+      +  TY++ IDGLCK G + +A E+F+ + +   E ++  YN LI G
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C +  +  A  L   +     +P+++TYN +I GLC  G+  +A  LF DM+     PD
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           VIT+  LI GF ++        L   M ++ V+PD    S +V+
Sbjct: 357 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 400



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 202/369 (54%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C+ N +T++ +IDGLCK   + +A   F +MK +   P+  TYN LI+G C  +  + A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            L  EM + G+ P+VVT++ ++   C+  K+D A +L   MV+ G  PN  TYNTL+ G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G ++ A EL   M   G + D  SY+ L+ G CK  +++ AL ++ +  +    P V
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           V Y+TL  GL +  +++ A KLF++M+ +    D  T+T  +DGLCK   + EA ++  T
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +    C  ++  Y+ LIDGLCK+G+++ A E+F  +    + PNVVTYN +I G C    
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D A  L  +M      PD+IT++ LI G  +     + N L   MK K   PD    S 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 563 VVDLLVKNE 571
           ++    K E
Sbjct: 363 LIGGFCKLE 371



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 121/231 (52%)

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           M C+ + +++ I+I+G CK   + EA + + +M  KG  P   TYN L  G  ++H+V  
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  L  EM+  G+A +  TY+T I G C+   +  A +LFR +    C  ++  YN L+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLC++G +  A+EL   +    L P+  +Y+ ++ GLC  G++D A  +F D       P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           DV+ +  LI G  +     +  +L  KM+E    PD    + ++D L K +
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGD 231



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 31/175 (17%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  PN+ TY  LI+ FC+ G+ ++ +     ++ +   PN  T+ SLI G     
Sbjct: 452 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTG 511

Query: 146 RIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN-------- 196
            + EA  +  +L +   C+ ++  Y  +++GLCRTG    AL L E +            
Sbjct: 512 DLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 571

Query: 197 ----------GEIGVV------------CKPNTVTYSTIIDGLCKEGFVDKAKAL 229
                      E+G               +PN   Y  +I  L +EG  ++A AL
Sbjct: 572 VALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 182/537 (33%), Positives = 298/537 (55%), Gaps = 32/537 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  +F  M+ MHP P  +  F  +L ++AK ++Y T ++        G+ P   T+NI
Sbjct: 36  DDAVALFHRMVDMHPLPS-IVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNI 94

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC +G++   F   G+IL+    PN  TF +L+KG     ++++A  ++ ++ A  
Sbjct: 95  LINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARR 154

Query: 162 CEPNVITYNTLINGLCRT--GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
              + + Y TLINGLC++  G    A+ L ++M     E   + KPN + Y+T++ GLCK
Sbjct: 155 IRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKM-----EERQLVKPNLIMYNTVVHGLCK 209

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA----------------NDWNEAKR 263
           +G +++A+ L  +M  + I PD+ TY+SLI+GLC A                N  +EA+ 
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           LF  M+++G Q  ++ +N++M+  C N K+ EA +L  +MV+RG +P+  TY  LM G+C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           L+ K++ A  LF  M   G   D  SYNILI GYCK + V EA++L  +M  K + P ++
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQR-DGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           TYN++  GL +   +  A KL DEM        D  TY   ++ LC+   + +A+  F+ 
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKH 449

Query: 443 LRILKC-ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           L   +    ++ +YN LI G CK+ RL  A  LF  +    LVP++VTYNI++  L N  
Sbjct: 450 LIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQ 509

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           Q+DKA  L + + +   +P++ T+++LI+G  +   P    ++   +  +   PD  
Sbjct: 510 QLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVK 566



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 152/502 (30%), Positives = 249/502 (49%), Gaps = 36/502 (7%)

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK   +      F R++     P+   F  ++  +        A  L+T ++  G  P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +T+N LIN  C  G    A ++  ++          C+PN VT++T++ G C    +  A
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWG------CRPNVVTFTTLMKGFCVNDKMLDA 143

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHAN--DWNEAKRLFIEMMD-QGVQPSVVTFNVI 283
             ++ +M    I  D V Y +LI+GLC +       A +L  +M + Q V+P+++ +N +
Sbjct: 144 LYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTV 203

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYN----------------TLMDGFCLMGK 327
           +  LCK+  ++EA  L   M+ +G+ P+  TY+                +L++GFCL  K
Sbjct: 204 VHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNK 263

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A ELF  M   G +HD ++YNIL+NGYC N +V EA  L+  MV +G +P  +TY  
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G   I +V+ A  LF  M   G+  D  +Y   I G CK   + EA+ L   + +  
Sbjct: 324 LMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKN 383

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWEL-----FCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
              +I  YN ++DGLCKSG +  AW+L     +C  P     P+V TYNI+++ LC    
Sbjct: 384 LVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPP----PDVTTYNILLESLCRIEC 439

Query: 503 MDKARDLFLDME-ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++KA   F  +  E + AP+V ++++LI G  +     +   L + M  K ++PD    +
Sbjct: 440 VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYN 499

Query: 562 IVVDLLVKNEISLKSLPSFLVQ 583
           I++D L   +  L    + LVQ
Sbjct: 500 ILLDALFNGQ-QLDKAIALLVQ 520


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/566 (32%), Positives = 296/566 (52%), Gaps = 43/566 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TG 91
           +EGD      ++A+  +  ML      P V ++N ++A+L K +  D  +         G
Sbjct: 208 KEGD-----SDKAYSTYHEMLD-RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEA 150
           + P+  TYN +++ +C  G+     I F + +RS    P+  T++ L+  L    R MEA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEA-IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG-------------- 195
             +F  +   G +P + TY TL+ G    G  +    L + M  NG              
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380

Query: 196 ---NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
               G++                PN VTY  +I  LCK G V+ A   F QM DE ++P 
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            + YNSLIHGLC  N W  A+ L +EM+D+G+  + + FN I+D  CK  ++ E+ +L +
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LMV+ GV+PN  TYNTL++G+CL GK++ A +L   M S+G K + V+Y+ LINGYCK  
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +E+AL L++EM S G+ P ++TYN +  GLF+  +   A +L+  +   G   +  TY 
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GLCKN    +A+++F+ L ++  +L+ + +N +ID L K GR   A +LF +    
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            LVPN  TY +M + +   G +++   LFL ME+N    D    + ++   ++  E ++ 
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLL 567
              L  + EK    +AS  S+ +DLL
Sbjct: 741 GTYLSMIDEKHFSLEASTASLFIDLL 766



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/570 (28%), Positives = 285/570 (50%), Gaps = 48/570 (8%)

Query: 59  RMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRV 112
           R   SPP V S+  ++    K    +K Y T   +   G+ P++ TYN +I   CK   +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                    ++++   P+  T+NS++ G  +  +  EA     K+++ G EP+V+TY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG---------------- 216
           ++ LC+ G  M A  +F+ M           KP   TY T++ G                
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRG------LKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 217 ----------------LC---KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                           +C   K+G VD+A  +F +M+ + +NP+ VTY ++I  LC +  
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             +A   F +M+D+G+ P  + +N ++  LC   K + A  L+  M+ RG+  N   +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           ++D  C  G++  +E+LF  M  +G K + ++YN LINGYC   +++EA+ L   MVS G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           +KP  VTY+TL  G  +I ++E AL LF EM+  GV+ D  TY   + GL +      A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           EL+  +     ++++  YN ++ GLCK+     A ++F +L    L     T+NIMI  L
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G+ D+A+DLF+    N   P+  T+ ++    I      ++++L   M++     D+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721

Query: 558 SIVSIVV-DLLVKNEISLKSLPSFLVQERQ 586
            +++ +V +LL + EI+       ++ E+ 
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDEKH 751



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 266/604 (44%), Gaps = 122/604 (20%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P+L TY 
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI C C+ GR+ LGF A G +++  F  +A  F  L+K                     
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK--------------------- 130

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
                         GLC    T  A+++         E+G  C PN  +Y+ ++ GLC E
Sbjct: 131 --------------GLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNILLKGLCDE 171

Query: 221 GFVDKAKALFLQMKDENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
               +A  L   M D+      PDVV+Y ++I+G     D ++A   + EM+D+G+ P V
Sbjct: 172 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDV 231

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT+N I+  LCK + MD+A  +L+ MV+ GV P+  TYN+++ G+C  G+   A      
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG------ 391
           M S G + D V+Y++L++  CKN    EA  ++  M  +G+KP + TY TL  G      
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 392 LFEIH-----------------------------QVEHALKLFDEMQRDGVAADTRTYTT 422
           L E+H                             +V+ A+ +F +M++ G+  +  TY  
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL-------------------- 462
            I  LCK+G + +A+  F  +           YN LI GL                    
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 463 ---------------CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
                          CK GR+  + +LF  +    + PNV+TYN +I G C  G+MD+A 
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            L   M      P+ +T+  LI+G+ +I+       L  +M+   V PD    +I++  L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 568 VKNE 571
            +  
Sbjct: 592 FQTR 595



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 222/470 (47%), Gaps = 23/470 (4%)

Query: 131 AATFNSLIKGLHAESRIMEAAAL--FTKLKAFGCE---PNVITYNTLINGLCRTGHTMIA 185
            A+   L + L   +R   AAA+  + ++   G +   P++ TY  LI   CR G     
Sbjct: 47  GASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGR---- 102

Query: 186 LNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINP 240
           L+L      G   +G V K     + + ++ ++ GLC +     A  + L+ M +    P
Sbjct: 103 LDL------GFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 156

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---GVQPSVVTFNVIMDELCKNRKMDEAS 297
           +V +YN L+ GLC  N   EA  L   M D    G  P VV++  +++   K    D+A 
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
                M+ RG+ P+  TYN+++   C    +++A E+  +M   G   D ++YN +++GY
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C + + +EA+   ++M S G++P VVTY+ L   L +  +   A K+FD M + G+  + 
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + G    G ++E   L   +       D   ++ LI    K G++  A  +F  
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L PN VTY  +I  LC  G+++ A   F  M +   +P  I ++ LIHG    N+
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  EL+ +M ++ +  +    + ++D   K    ++S   F +  R G
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 194/427 (45%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP       F+IL+ + AK    D      +++   GL PN  TY 
Sbjct: 354 EMHGLLDLMVRNGIHPDH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV    + F +++    +P    +NSLI GL                   
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +PNVITYNTLING C  G    A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           + L       +G + V  KPNTVTYST+I+G CK   ++ A  LF +M+   ++PD++TY
Sbjct: 531 MKLL------SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ + + G Q  + T+N+I+  LCKN+  D+A ++   +  
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 644

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++  A T+N ++D    +G+ + A++LF +  S G   +  +Y ++         +EE
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N +   L +  ++  A      +     + +  T + FID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 765 LLSGGKY 771


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 192/579 (33%), Positives = 295/579 (50%), Gaps = 74/579 (12%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++  L+K+   D  +         G  PN+++YN +++ FCK  RV     
Sbjct: 41  PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 100

Query: 118 AFGR-ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
              + ++R C  P+  ++ ++I GL    ++ EA  +  K+   GC+PNVITY TL++G 
Sbjct: 101 LLEQMVMRGC-PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159

Query: 177 CRTG----------------------------HTMI-------ALNLFEEMANG------ 195
           CR G                            H +        AL LF+EM         
Sbjct: 160 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPD 219

Query: 196 -------------NGEIGVVCK-----------PNTVTYSTIIDGLCKEGFVDKAKALFL 231
                        +G++   C+           PN VTYS+++ GLCK G +D+A AL  
Sbjct: 220 VFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M     +P++VTYN++I G C     +EA  L  EM+D G QP+VVT+ V++D  CK  
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K ++A  L+++MV++G  PN  TYN+L+D FC   ++ RA +L  SM   GC  + VSYN
Sbjct: 340 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYN 399

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I G CK  +V E + L  +M+S    P +VT+NT+   + + ++V+ A +LF+ +Q  
Sbjct: 400 TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 459

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKF 470
           G   +  TY + + GLCK+    +A  L R + R   C  DI  YN +IDGLCKS R+  
Sbjct: 460 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 519

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A++LF  +    L P+ VTY+I+I  LC    MD+A ++   M +N   P  IT+  LI 
Sbjct: 520 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 579

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           GF +     K  E+L  +  K   PD    SI +D L K
Sbjct: 580 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSK 618



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 165/493 (33%), Positives = 263/493 (53%), Gaps = 13/493 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           + A  +F  M      PP V +++ ++ SL K+   D        + + G  PN+ TY+ 
Sbjct: 201 DSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSS 260

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++  CK G++        R+ RS  +PN  T+N++I G     RI EA  L  ++   G
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C+PNV+TY  L++  C+ G    A+ L E M     E G V  PN  TY++++D  CK+ 
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV----EKGYV--PNLFTYNSLLDMFCKKD 374

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++A  L   M  +   P+VV+YN++I GLC A   +E   L  +M+     P +VTFN
Sbjct: 375 EVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ES 340
            I+D +CK  ++D A  L +L+ + G  PN  TYN+L+ G C   + ++AE L   M   
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC  D ++YN +I+G CK+K V+ A  L+ +M+S G+ P  VTY+ +   L +   ++ 
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 554

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  + + M ++G      TY T IDG CK G + +A+E+ + L       D+  ++  ID
Sbjct: 555 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 614

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            L K GRL+ A EL  ++    LVP+ VTYN +++G C+  + + A DLF  M +    P
Sbjct: 615 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEP 674

Query: 521 DVITFDMLIHGFI 533
           D  T+  L+   +
Sbjct: 675 DNATYTTLVGHLV 687



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 238/447 (53%), Gaps = 8/447 (1%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R     +A    S+++GL    +  +A   F ++    C P+ +TYNT+INGL ++    
Sbjct: 3   RKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLD 61

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A+ L EEM + NG       PN  +Y+T++ G CK   V+ A  L  QM      PDVV
Sbjct: 62  DAIRLLEEMVD-NGF-----APNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVV 115

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +Y ++I+GLC  +  +EA R+  +M+ +G QP+V+T+  ++D  C+   +D A  L+  M
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKE 362
            +RG RPNA TYN +M G C   K++ A +LF  ME  G C  D  +Y+ +++   K+ +
Sbjct: 176 TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGK 235

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V++A  L   MVSKG  P VVTY++L  GL +  +++ A  L   M R G + +  TY T
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG CK G I EA  L   +    C+ ++  Y  L+D  CK G+ + A  L   +    
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            VPN+ TYN ++   C   ++++A  L   M +    P+V++++ +I G  +  +  +  
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
            LL +M     +PD    + ++D + K
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCK 442



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 1/185 (0%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  KG+K     + ++  GL +  Q   A+  F EM +     D+ TY T I+GL K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + +A+ L   +       ++ +YN ++ G CK+ R++ A  L   +      P+VV+Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I GLC   Q+D+A  +   M +    P+VIT+  L+ GF R+ +     EL+ KM E+ 
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 553 VMPDA 557
             P+A
Sbjct: 180 YRPNA 184


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  315 bits (806), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/566 (32%), Positives = 296/566 (52%), Gaps = 43/566 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TG 91
           +EGD      ++A+  +  ML      P V ++N ++A+L K +  D  +         G
Sbjct: 208 KEGD-----SDKAYSTYHEMLD-RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEA 150
           + P+  TYN +++ +C  G+     I F + +RS    P+  T++ L+  L    R MEA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEA-IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG-------------- 195
             +F  +   G +P + TY TL+ G    G  +    L + M  NG              
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380

Query: 196 ---NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
               G++                PN VTY  +I  LCK G V+ A   F QM DE ++P 
Sbjct: 381 YANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            + YNSLIHGLC  N W  A+ L +EM+D+G+  + + FN I+D  CK  ++ E+ +L +
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LMV+ GV+PN  TYNTL++G+CL GK++ A +L   M S+G K + V+Y+ LINGYCK  
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +E+AL L++EM S G+ P ++TYN +  GLF+  +   A +L+  +   G   +  TY 
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GLCKN    +A+++F+ L ++  +L+ + +N +ID L K GR   A +LF +    
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            LVPN  TY +M + +   G +++   LFL ME+N    D    + ++   ++  E ++ 
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLL 567
              L  + EK    +AS  S+ +DLL
Sbjct: 741 GTYLSMIDEKHFSLEASTASLFIDLL 766



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 163/570 (28%), Positives = 284/570 (49%), Gaps = 48/570 (8%)

Query: 59  RMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRV 112
           R   SPP V S+  ++    K    +K Y T   +   G+ P++ TYN +I   CK   +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                    ++++   P+  T+NS++ G  +  +  EA     K+++ G EP+V+TY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG---------------- 216
           ++ LC+ G  M A  +F+ M           KP   TY T++ G                
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRG------LKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 217 ----------------LCK---EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                           +C    +G VD+A  +F +M+ + +NP+ VTY ++I  LC +  
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             +A   F +M+D+G+ P  + +N ++  LC   K + A  L+  M+ RG+  N   +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           ++D  C  G++  +E+LF  M  +G K + ++YN LINGYC   +++EA+ L   MVS G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           +KP  VTY+TL  G  +I ++E AL LF EM+  GV+ D  TY   + GL +      A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           EL+  +     ++++  YN ++ GLCK+     A ++F +L    L     T+NIMI  L
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G+ D+A+DLF+    N   P+  T+ ++    I      ++++L   M++     D+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721

Query: 558 SIVSIVV-DLLVKNEISLKSLPSFLVQERQ 586
            +++ +V +LL + EI+       ++ E+ 
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDEKH 751



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 266/604 (44%), Gaps = 122/604 (20%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P+L TY 
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI C C+ GR+ LGF A G +++  F  +A  F  L+K                     
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK--------------------- 130

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
                         GLC    T  A+++         E+G  C PN  +Y+ ++ GLC E
Sbjct: 131 --------------GLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNILLKGLCDE 171

Query: 221 GFVDKAKALFLQMKDENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
               +A  L   M D+      PDVV+Y ++I+G     D ++A   + EM+D+G+ P V
Sbjct: 172 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDV 231

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT+N I+  LCK + MD+A  +L+ MV+ GV P+  TYN+++ G+C  G+   A      
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG------ 391
           M S G + D V+Y++L++  CKN    EA  ++  M  +G+KP + TY TL  G      
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 392 LFEIH-----------------------------QVEHALKLFDEMQRDGVAADTRTYTT 422
           L E+H                             +V+ A+ +F +M++ G+  +  TY  
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL-------------------- 462
            I  LCK+G + +A+  F  +           YN LI GL                    
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 463 ---------------CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
                          CK GR+  + +LF  +    + PNV+TYN +I G C  G+MD+A 
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            L   M      P+ +T+  LI+G+ +I+       L  +M+   V PD    +I++  L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 568 VKNE 571
            +  
Sbjct: 592 FQTR 595



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 221/470 (47%), Gaps = 23/470 (4%)

Query: 131 AATFNSLIKGLHAESRIMEAAAL--FTKLKAFGCE---PNVITYNTLINGLCRTGHTMIA 185
            A+   L + L   +R   AAA+  + ++   G +   P++ TY  LI   CR G     
Sbjct: 47  GASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGR---- 102

Query: 186 LNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINP 240
           L+L      G   +G V K     + + ++ ++ GLC +     A  + L+ M +    P
Sbjct: 103 LDL------GFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 156

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---GVQPSVVTFNVIMDELCKNRKMDEAS 297
           +V +YN L+ GLC  N   EA  L   M D    G  P VV++  +++   K    D+A 
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
                M+ RG+ P+  TYN+++   C    +++A E+  +M   G   D ++YN +++GY
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C + + +EA+   ++M S G++P VVTY+ L   L +  +   A K+FD M + G+  + 
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + G    G ++E   L   +       D   ++ LI      G++  A  +F  
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSK 396

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L PN VTY  +I  LC  G+++ A   F  M +   +P  I ++ LIHG    N+
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  EL+ +M ++ +  +    + ++D   K    ++S   F +  R G
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 193/427 (45%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP       F+IL+ + A     D      +++   GL PN  TY 
Sbjct: 354 EMHGLLDLMVRNGIHPDH---YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYG 410

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV    + F +++    +P    +NSLI GL                   
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +PNVITYNTLING C  G    A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           + L       +G + V  KPNTVTYST+I+G CK   ++ A  LF +M+   ++PD++TY
Sbjct: 531 MKLL------SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ + + G Q  + T+N+I+  LCKN+  D+A ++   +  
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 644

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++  A T+N ++D    +G+ + A++LF +  S G   +  +Y ++         +EE
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N +   L +  ++  A      +     + +  T + FID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 765 LLSGGKY 771


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 193/567 (34%), Positives = 303/567 (53%), Gaps = 45/567 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD++     +A+  +  ML      P V ++N ++A+L K +  D      T +   G
Sbjct: 211 KEGDLD-----KAYGTYHEMLD-RGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 92  LFPNLYTYNILINCFCKIG--RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  G  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLK--KMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG------------- 195
           A  +F  +   G +P + TY TL+ G    G  +    L + M  NG             
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 196 ----NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                G++                P+TVTY T+I  LCK G V+ A   F QM DE ++P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
             + YNSLIH LC  + W++AK L +EM+D+G+    + FN I+D  CK  ++ E+ +L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLMV+ GV+PN  TY+TL+DG+CL GK++ A +L  SM S+G K D V+YN LINGYCK 
Sbjct: 503 DLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +E+AL L+REM S G+ P ++TYN +  GLF+  +   A +L+  +   G   +  TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR   A +LF +L  
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+V TY++M + L   G +++  DLFL MEEN    +    + ++   ++  + ++
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
               L  + EK    +AS  S+ +DLL
Sbjct: 743 AGTYLFMIDEKHFSLEASTASLFLDLL 769



 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 181/635 (28%), Positives = 292/635 (45%), Gaps = 119/635 (18%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + PNL TY 
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI   C  GR+ LGF A G +++  F  +A  F  L+KGL A+ R  +A  +   ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNV +YN L+ GLC    +  AL L + M +  G+    C P+ V+Y+T+I+G  K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFK 211

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLI------------------------------ 249
           EG +DKA   + +M D  I P+VVTYNS+I                              
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 250 -----HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
                HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA ++ D M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 305 QRGVRPNACTYNTLMDGFCL-----------------------------------MGKIN 329
           +RG++P   TY TL+ G+                                      GK++
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL- 388
           +A  +F  M   G   D V+Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L 
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 389 ------------------------------FLGLFEIH----QVEHALKLFDEMQRDGVA 414
                                         F  + + H    +V  + KLFD M R GV 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  TY+T IDG C  G + EA +L  ++  +  + D   YN LI+G CK  R++ A  L
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    + P+++TYNI++QGL    +   A++L++ + E+    ++ T+++++HG  +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            N   +   +   +    +  +    +I++  L+K
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 287/571 (50%), Gaps = 41/571 (7%)

Query: 57  MLRMHPS-----PPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINC 105
           +L+M P      PP V S+  ++    K    +K Y T   +   G+ PN+ TYN +I  
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAA 243

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK   +         ++++   PN  T+NS++ G  +  +  EA     K+ + G EP+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIGVVCK------ 204
           V+TYN+L++ LC+ G    A  +F+ M                 G    G + +      
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 205 --------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   PN   +S +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC + 
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A R F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ RG+  +   +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++D  C  G++  +E+LF  M  +G K + ++Y+ LI+GYC   +++EA  L   MVS 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+KP  VTYNTL  G  +I ++E AL LF EM+  GV+ D  TY   + GL +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL+  +     +L++  YN ++ GLCK+     A  +F +L    L     T+NIMI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L   G+ D+A+DLF  +  N   PDV T+ ++    I      ++++L   M+E     +
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 557 ASIV-SIVVDLLVKNEISLKSLPSFLVQERQ 586
           + ++ SIV  LL + +I+      F++ E+ 
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 190/427 (44%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP+      F+IL+ + AK    D      +++   GL P+  TY 
Sbjct: 357 EMHGLLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV      F +++    +P    +NSLI  L                   
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +PN+ITY+TLI+G C  G    A
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEA 533

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L   M      + V  KP+ VTY+T+I+G CK   ++ A  LF +M+   ++PD++TY
Sbjct: 534 TKLLASM------VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +  
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++    T+N ++     +G+ + A++LF ++ + G   D  +Y+++     +   +EE
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N++   L +   +  A      +     + +  T + F+D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 768 LLSGGKY 774



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 160/355 (45%), Gaps = 38/355 (10%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC +++  +
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNI 352
           A  + L  M Q G  PN  +YN L+ G C   +   A EL   M   G  C  D VSY  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +ING+ K  ++++A   Y EM+ +GI P VVTYN++   L +   ++ A+++   M ++G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  + RT                                   YN ++ G C SG+ K A 
Sbjct: 265 VMPNCRT-----------------------------------YNSIVHGYCSSGQPKEAI 289

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                +    + P+VVTYN ++  LC +G+  +AR +F  M +    P++ T+  L+ G+
Sbjct: 290 GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGY 349

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                  +++ LL  M    + P+  + SI++    K     +++  F    +QG
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  314 bits (805), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 190/555 (34%), Positives = 300/555 (54%), Gaps = 36/555 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           + A+ +FD ML    SP  V ++N ++++L+K +  D       R+   G  PN  T+N 
Sbjct: 220 DTAYHLFDQMLDQGLSPD-VVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNS 278

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ +C  G+ +     F R+ R    P+  T+N+L+  L    R MEA  +F  +   G
Sbjct: 279 LLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRG 338

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG--------NGEIGVVCK-------- 204
            +PN  TY TL++G    G  +   +L + M  NG        N  IG   K        
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       P+TVTY  ++D LC  G VD A A F ++  E + PD V + +LIHGL
Sbjct: 399 LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C  + W++A+ L +EM+ +G+ P+ + FN +++ LCK   +  A  + DLMV+  V+ + 
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYNTL+DG+CL GK++ A +L   M   G K ++V+YN +INGYCKN  +E+A SL+R+
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M SKG+ P +VTY+T+  GLF+  +   A +L+  M + G+  D  TY   + GLC+N  
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             +A+ +F+ L ++   L+ + +N +ID L K GR   A +LF SL    LVPNVVTY +
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWL 698

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           M++ L   G +++  DLFL +E+N    +    + L+   ++  E  K    L K+ E  
Sbjct: 699 MMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENN 758

Query: 553 VMPDASIVSIVVDLL 567
              +AS    +V L+
Sbjct: 759 FSLEASTAESLVLLV 773



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 169/559 (30%), Positives = 267/559 (47%), Gaps = 73/559 (13%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PNL TY+++I+C  ++G + L F A GR++RS +T  A TF+ L+K L  + R  EA  +
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 154 -FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
              ++   GC PNV +Y  L+ GLC    +  AL+L   M   +   G    P+ V+Y+T
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGY-PPDVVSYNT 207

Query: 213 IIDGLCKEGF-VDKAKALFLQMKDENINPDVVTYNSLI---------------------- 249
           +I+GL +EG  +D A  LF QM D+ ++PDVVTYNS+I                      
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267

Query: 250 -------------HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
                        HG C +   N+A  +F  M   GV+P V T+N +M  LCKN +  EA
Sbjct: 268 GAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEA 327

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            ++ D MV+RG +PN+ TY TL+ G+   G + +   L   M   G + D   +NILI  
Sbjct: 328 RKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           Y K+ +V++A+ L+ +M  +G+ P  VTY  +   L  + +V+ A+  F  +  +G+  D
Sbjct: 388 YTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPD 447

Query: 417 TRTYTTFIDG-----------------------------------LCKNGYIIEAVELFR 441
              +   I G                                   LCK G +  A  +F 
Sbjct: 448 AVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFD 507

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +  +  + D+  YN LIDG C  G++  A +L   +    + PN VTYN MI G C +G
Sbjct: 508 LMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNG 567

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           +++ A  LF  M      P ++T+  ++ G  +    +   EL   M +  +  D    +
Sbjct: 568 RIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYN 627

Query: 562 IVVDLLVKNEISLKSLPSF 580
           I++  L +N  +  +L  F
Sbjct: 628 IILLGLCQNNCTDDALRIF 646



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 9/323 (2%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P+++T++V++D   +   +D A   L  +++ G    A T++ L+   C   + + A 
Sbjct: 87  VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146

Query: 333 EL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-----SKGIKPTVVTYN 386
           ++    M  +GC  +  SY IL+ G C     ++AL L   M+       G  P VV+YN
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206

Query: 387 TLFLGLF-EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA-VELFRTLR 444
           T+  GL  E  Q++ A  LFD+M   G++ D  TY + I  L K   + +A V L R ++
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                  I  +N L+ G C SG+   A  +F  +    + P+V TYN ++  LC +G+  
Sbjct: 267 NGAMPNRI-THNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +AR +F  M +    P+  T+  L+HG+       K++ LL  M    + PD  I +I++
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILI 385

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
               K+     ++  F    RQG
Sbjct: 386 GTYTKHGKVDDAMLLFSKMRRQG 408


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  314 bits (805), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 164/515 (31%), Positives = 277/515 (53%), Gaps = 9/515 (1%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSL 114
           +R     P  + +N ++ +L K ++    L+   +     N+ T+ I+I+  CK  R+  
Sbjct: 85  MRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPE 144

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
               F ++ +    PN  T+N LI G     ++  A  L  ++K  G  PNV+TY+T+I+
Sbjct: 145 ATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIH 204

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G CR      A  LF +M   NG     C PN VTY+T++ GLC+ G +D+A  L  +M+
Sbjct: 205 GFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           +  + PD  +Y++L+ GLC     + A ++F +  +    P VV ++ ++  LCK  ++D
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD 318

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA +L + M +    P+  T+  LMDG C   ++  A+++  +ME   C  + ++Y+ LI
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 378

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G CK  +V +A  +++ M+ +GI+P VVTYN+L  G    + V+ AL L +EM   G  
Sbjct: 379 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 438

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY T IDGLCK G   EA  LF  ++   C  D+  Y+CLI G CK  R+  A  L
Sbjct: 439 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 498

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    ++P+VVT++ +++G CN G +D A  L  +M  +  +PDV T+  L+ GF +
Sbjct: 499 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 558

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +    +   +L +M ++   P+    + ++D   +
Sbjct: 559 VGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 593



 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 184/626 (29%), Positives = 309/626 (49%), Gaps = 105/626 (16%)

Query: 67  VSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++ I++  L K         Y  ++   G  PN +TYN+LIN FCK+ +V   ++   
Sbjct: 126 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 185

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR-- 178
            +  S   PN  T++++I G   ++++  A  LF ++   GC PN++TYNTL++GLCR  
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245

Query: 179 ---------------------------------TGHTMIALNLFEEMANGNGEIGVVCKP 205
                                            TG   +AL +FE+ +NG+      C P
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD------CPP 299

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + V YST+I GLCK G +D+A  LF +M++ +  PDVVT+ +L+ GLC  +   EA+++ 
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN--------- 316
             M D+   P+V+T++ ++D LCK  ++ +A  +   M+ RG+ PN  TYN         
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 317 --------------------------TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
                                     TL+DG C  G+   A  LFG M++  C  D ++Y
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           + LI G+CK + ++ A +L+ +M+ + + P VVT++TL  G      V+ A +L +EM  
Sbjct: 480 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 539

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
              + D  TYT+ +DG CK G ++EA  + + +    C+ ++  Y  LID  C++G+   
Sbjct: 540 SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTV 599

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--LDMEENAAAPDVITFDML 528
           A+ L   +    + PNV+TY  +I G C  G +++AR +   L+ +EN  A D+  + ++
Sbjct: 600 AYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKA-DMFAYRVM 658

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-------------DLLVKNEISLK 575
           + G  R    S   ELL  +K+    P   I   ++             ++L +  +S K
Sbjct: 659 MDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRK 718

Query: 576 SLPS-----FLVQE--RQGEVGESNV 594
           S P+      ++QE  R+G   E+N 
Sbjct: 719 SRPNAEAYEAVIQELAREGRHEEANA 744



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 159/481 (33%), Positives = 248/481 (51%), Gaps = 9/481 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N+YTYN L     +  R+               TPN  T+  +I+GL     + +A
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  +++  G  P+   YN +I+ LC+  +T  AL+ F  M          C+ N +T+
Sbjct: 79  CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---------CEKNVITW 129

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +IDGLCK   + +A   F +MK +   P+  TYN LI+G C  +  + A  L  EM +
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 189

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+VVT++ ++   C+  K+D A +L   MV+ G  PN  TYNTL+ G C  G ++ 
Sbjct: 190 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 249

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A EL   M   G + D  SY+ L+ G CK  +++ AL ++ +  +    P VV Y+TL  
Sbjct: 250 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 309

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +++ A KLF++M+ +    D  T+T  +DGLCK   + EA ++  T+    C  
Sbjct: 310 GLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++  Y+ LIDGLCK+G+++ A E+F  +    + PNVVTYN +I G C    +D A  L 
Sbjct: 370 NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 429

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +M      PD+IT++ LI G  +     + N L   MK K   PD    S ++    K 
Sbjct: 430 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 489

Query: 571 E 571
           E
Sbjct: 490 E 490



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 186/369 (50%), Gaps = 32/369 (8%)

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           K +  + +V TYN L   L  A   +E   +       G+ P+V T+ V++  LCK+  +
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 294 DEASRLLDLMVQRGVRPNACTYN--------------------------------TLMDG 321
           D+A  LL+ M + G  P+A  YN                                 ++DG
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C   ++  A   F  M+  G   ++ +YN+LING+CK  +V  A  L +EM   G+ P 
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTY+T+  G     +V+ A KLF +M  +G   +  TY T + GLC+NG + EA EL  
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +R    + D  +Y+ L+ GLCK+G++  A ++F    +G   P+VV Y+ +I GLC  G
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++D+A  LF  M EN+  PDV+TF  L+ G  + +   +  ++L  M+++   P+    S
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375

Query: 562 IVVDLLVKN 570
            ++D L K 
Sbjct: 376 SLIDGLCKT 384



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 31/175 (17%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  PN+ TY  LI+ FC+ G+ ++ +     ++ +   PN  T+ SLI G     
Sbjct: 571 RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTG 630

Query: 146 RIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN-------- 196
            + EA  +  +L +   C+ ++  Y  +++GLCRTG    AL L E +            
Sbjct: 631 DLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 690

Query: 197 ----------GEIGVV------------CKPNTVTYSTIIDGLCKEGFVDKAKAL 229
                      E+G               +PN   Y  +I  L +EG  ++A AL
Sbjct: 691 VALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 745



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%)

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NV TYN + + L    ++D+   +  +       P+V T+ ++I G  +  +  K  ELL
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
            +M+E   +PDA+I + V+  L K   + K+L  F   E
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME 121


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  314 bits (805), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 175/482 (36%), Positives = 269/482 (55%), Gaps = 9/482 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+ TYN LI+  CK          F  +     +P+  T+N+L+ GL    ++  A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            ALF ++       +VI++N L+ GLCR G    AL  F +M +        C PN +TY
Sbjct: 65  MALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-------CSPNVITY 116

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S +IDGLCK   V +A  L   MK    +PDV+TY  L+ GLC  +    A  +  EM+D
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G  P++VT+N ++  LC+ R++ +A  L+  M  RG  PN  TY TL+DG C +G++  
Sbjct: 177 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 236

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +   M   G   D + YN+LING CK  +V+E+++L R  VS GIKP VVTY+++  
Sbjct: 237 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 296

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL   ++++ A +L   ++  G   D   Y+T IDGLCK G + EA +L+  +    C+ 
Sbjct: 297 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDA 356

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  Y+ LIDGLCK+GR+  A  L   +      P+ +TYN +I+GLC+   +D+A +L 
Sbjct: 357 DVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELV 416

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINE-PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +ME +  AP  +T+++LIHG  R+    S   +   +M +  V+PD    SI+++ L K
Sbjct: 417 EEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKK 476

Query: 570 NE 571
           ++
Sbjct: 477 SK 478



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 250/475 (52%), Gaps = 20/475 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFP--------NLYT 98
           P+ A  +F++M  +  SP  V+ +N LL  L +    +    A  LF         ++ +
Sbjct: 26  PDRAQELFEHMKSVECSPSMVT-YNTLLDGLFRTGKLE---RAMALFQEMLDRRSHDVIS 81

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +NIL+   C+ G++      F ++   C +PN  T++ LI GL   +R+ +A  L   +K
Sbjct: 82  FNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSVLIDGLCKANRVSQAVELLESMK 140

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A GC P+VITY  L++GLC+      A  +  EM +        C PN VTY++++ GLC
Sbjct: 141 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG------CVPNLVTYNSLLHGLC 194

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           +   V  A AL   M      P+VVTY +LI GLC      +A  +  +M+D+G  P ++
Sbjct: 195 RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM 254

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +N++++ LCK  ++DE+  LL   V  G++P+  TY++++ G C   +++ A  L   +
Sbjct: 255 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 314

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S GC  D + Y+ LI+G CK  +V+EA  LY  M   G    VVTY+TL  GL +  +V
Sbjct: 315 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRV 374

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  L   M R G    T TY + I GLC   ++ EA+EL   +    C      YN L
Sbjct: 375 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 434

Query: 459 IDGLCKSGRL-KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           I G+C+  R+   A + F  +    ++P+ +TY+I+++GL     + + R L LD
Sbjct: 435 IHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 181/370 (48%), Gaps = 33/370 (8%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+D    P+VVTYNSLI GLC  N+ + A+ LF  M      PS+VT+N ++D L +  K
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 293 MDEASRLLDLMVQR---------------------------------GVRPNACTYNTLM 319
           ++ A  L   M+ R                                    PN  TY+ L+
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG C   ++++A EL  SM++ GC  D ++Y IL++G CK  +V  A  + REM+  G  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P +VTYN+L  GL    +V  AL L  +M   G   +  TY T IDGLCK G + +A  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              +       D+  YN LI+GLCK+ ++  +  L      G + P+VVTY+ +I GLC 
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
             ++D+A  L L ++     PDVI +  LI G  +  +  +  +L   M       D   
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360

Query: 560 VSIVVDLLVK 569
            S ++D L K
Sbjct: 361 YSTLIDGLCK 370



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 129/256 (50%), Gaps = 43/256 (16%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+L  YN+LIN  CK  +V        R +     P+  T++S+I GL   +R+ EA
Sbjct: 248 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 307

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +K+ GC P+VI Y+TLI+GLC+ G    A +L+E M  G+G     C  + VTY
Sbjct: 308 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM-TGDG-----CDADVVTY 361

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL------ 264
           ST+IDGLCK G VD+A  L  +M      P  +TYNSLI GLC  N  +EA  L      
Sbjct: 362 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 421

Query: 265 ------------------------------FIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                                         F EM+D GV P  +T++++++ L K++ + 
Sbjct: 422 SNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 481

Query: 295 EASRL-LDLMVQRGVR 309
           E   L LD MVQ G R
Sbjct: 482 ELRHLVLDQMVQLGYR 497


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  314 bits (804), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 163/492 (33%), Positives = 277/492 (56%), Gaps = 6/492 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++A GL P+ +TY +L++  CK G+ +     F  ++R    P+ + +  ++ G   +  
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGA 359

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E  +    +   G  PN   +N +     +      A+++F +M            PN
Sbjct: 360 LSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG------LSPN 413

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+T+ID LCK G VD A+  F QM +E + P++V + SL++GLC  + W +A  LF 
Sbjct: 414 VVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFF 473

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM++QG+ P+VV FN IM  LC   ++ +A RL+DLM + G RP+  +YN L+ G CL+G
Sbjct: 474 EMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVG 533

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K + A +L   M S+G K ++ +YN L++GYC++  +++A S+++EM+S GI P VVTYN
Sbjct: 534 KTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYN 593

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF+  +   A +L+  M   G      TY   ++GL KN  + EA+++F++L   
Sbjct: 594 TILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSK 653

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             ++DI  +N +I  L K GR + A  LF ++    LVP+V TY ++ + L  +G +++ 
Sbjct: 654 DLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEF 713

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +F +ME++  AP+ +  + L+   +   + S+    L K+ EK    +AS  S+++ L
Sbjct: 714 DGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISL 773

Query: 567 LVKNEISLKSLP 578
             + E   KSLP
Sbjct: 774 FSREEHQAKSLP 785



 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 185/634 (29%), Positives = 297/634 (46%), Gaps = 100/634 (15%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT----------- 85
            R G ++V   ++A  +FD  L  H  P  + +FN LLA+++      +           
Sbjct: 24  ARAGSLSV---DDALKLFDEFLH-HARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCF 79

Query: 86  ----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF-------------- 127
               R   + + P+++TY+IL+ CFC++GR+  GF AFG IL++ +              
Sbjct: 80  NRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKG 139

Query: 128 -----------------------TPNAATFNSLIKGLHAESRIMEAAALFTKL---KAFG 161
                                  TPN  ++N+L+KG   E+R  EA  L   +   +   
Sbjct: 140 LCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRS 199

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN+++YNT+ING    G    A NLF +M +          PN VTY+ +IDGLCK  
Sbjct: 200 CPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQG------IPPNVVTYTIVIDGLCKAQ 253

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A+ +F QM D+ + P++VTY  LIHG      W E  R+  EM   G++P   T+ 
Sbjct: 254 VVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYG 313

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG-------------------- 321
           +++D LCK  K  EA +L D M+++G++P+   Y  ++ G                    
Sbjct: 314 LLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGN 373

Query: 322 ------------FCLMGK---INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
                       FC   K   I  A ++F  M   G   + V+Y  LI+  CK   V++A
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
              + +M+++G+ P +V + +L  GL  I + E A +LF EM   G+  +   + T +  
Sbjct: 434 ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC  G +++A  L   +  +    DI +YN LI G C  G+   A +L   +    L PN
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
             TYN ++ G C DG++D A  +F +M  N   P V+T++ ++HG  +    S+  EL  
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            M            +I+++ L KN    ++L  F
Sbjct: 614 NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMF 647


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  314 bits (804), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 178/498 (35%), Positives = 277/498 (55%), Gaps = 51/498 (10%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIG 110
           ML++ P+PP +  FN +LASL K  HY T      +L   G+ P++ T  IL+NC+C  G
Sbjct: 1   MLQISPTPP-ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTG 59

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
            ++  F                                   ++ TK+   G EPN IT+ 
Sbjct: 60  GITFLF-----------------------------------SILTKILKMGYEPNSITFT 84

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           TLI G+C  G    AL LF +    +G      K + V+Y+ +++GLCK G   + +A  
Sbjct: 85  TLIKGMCLNGQAYEAL-LFHDHVVAHG-----FKLDQVSYAILMNGLCKMG---ETRAAM 135

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             ++   +N DVV Y+++I  LC      +A RL+ EM+ +G+ P+V TF++++D LCK+
Sbjct: 136 QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKD 195

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
           RK  +A  LL +M+++GV+PN  TY  +MDG+CL+ ++N+A  +F  M   G + +   Y
Sbjct: 196 RKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCY 255

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           NI+ING CK K V+EA++L++EM  K I P VVTYN L  GL ++ ++  +L+L DEM+ 
Sbjct: 256 NIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRS 315

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D  TY + +  LCKN ++ +A+ L + ++    + ++  Y  LIDGLCK GRL+ 
Sbjct: 316 IGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLED 375

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A+ +F  +        V TYN+MI GLC  G  D+A  L   ME+NA  PD ++++ +I+
Sbjct: 376 AYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIY 435

Query: 531 GFIRINEPSKVNELLHKM 548
                 E  K N+LL  M
Sbjct: 436 ALSEKGETVKTNKLLCAM 453



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 173/330 (52%), Gaps = 16/330 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCK-- 108
           MLR       V  ++ ++ SL K K         + + A G+FPN+YT++IL++  CK  
Sbjct: 137 MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDR 196

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            G+ ++  +A   +++    PN  T+ +++ G    +++ +A  +F  +   G EPNV  
Sbjct: 197 KGKQAMNLLAM--MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWC 254

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN +INGLC+      A+NLF+EM            P+ VTY+ +IDGLCK G +  +  
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKK------INPDVVTYNILIDGLCKLGKISTSLE 308

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L  +M+      D++TYNSL+H LC  +  ++A  L  E+ DQG+QP+V T+  ++D LC
Sbjct: 309 LVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLC 368

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K+ ++++A  +   ++  G      TYN +++G C  G  + A  L   ME   C  D V
Sbjct: 369 KDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAV 428

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGI 378
           SY  +I    +  E  +   L   M+ +G+
Sbjct: 429 SYETIIYALSEKGETVKTNKLLCAMIVRGL 458


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 173/522 (33%), Positives = 289/522 (55%), Gaps = 14/522 (2%)

Query: 65  PPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++NI+      L  L +      +++ +GL P++ TY +LI  +CKIGR +     
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R    PN+  ++ L+ G   +  +++   L   +   G       +N LI    +
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+  F EM   NG      +P+ V+YST+I  LCK G V+ A   F QM  E +
Sbjct: 391 HGAVDKAMTAFTEMRQ-NG-----LRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGL 444

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P+++++ SLIHGLC   +W + + L  EM+++G+ P  +  N IMD LCK  ++ EA  
Sbjct: 445 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 504

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D+++  GV+PN  +YNTL+DG+C +GK++ + + F  M S+G + D  +YN L+NGY 
Sbjct: 505 FFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF 564

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           KN  VE+AL+LYREM  K +K   +T N +  GLF+  ++  A +L+ +M   G      
Sbjct: 565 KNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIE 624

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + GLC+N  + EA+ +F  LR  + ELD+  +N +I+ L K GR+  A  LF ++
Sbjct: 625 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                VP+V+TY++MI+    +G ++++ DLFL ME+N  A D    +++I   +   + 
Sbjct: 685 VLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDV 744

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLV--KNEISLKSLP 578
            +    L K+ EK    +AS  ++++ ++   K +  +K LP
Sbjct: 745 RRAGTYLTKIDEKNFSVEASTAALLIPIVSEKKYQKEVKFLP 786



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 182/558 (32%), Positives = 275/558 (49%), Gaps = 58/558 (10%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF--------------- 93
           +A  +FD +L     P  V +FN +L  +A+     +  ++  L                
Sbjct: 32  DALNLFDELLP-QARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 94  -PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
             N Y   ILI CFC +GR+ L F AF   L+  +     T N LIKGL    R  +A  
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 153 L-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTY 210
           + F ++   G  P+V +YN LI GLC    +  AL L   M A+G    G  C PN V+Y
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADG----GYNCSPNVVSY 206

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           STIIDG  KEG VDKA  LF +M  +   PDVVTY+SLI GLC A   N+A+ +   M D
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFD 266

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +GV P+  T+N+++   C   +++EA RLL  M   G++P+  TY  L+  +C +G+   
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAE 326

Query: 331 AEELFGSMESMGCKHDDVSYNILING---------------------------------- 356
           A  +F SM   G K +   Y+IL++G                                  
Sbjct: 327 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILIC 386

Query: 357 -YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            Y K+  V++A++ + EM   G++P VV+Y+T+   L +I +VE A+  F++M  +G++ 
Sbjct: 387 AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSP 446

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  ++T+ I GLC  G   +  EL   +       D    N ++D LCK GR+  A + F
Sbjct: 447 NIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 506

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             + H  + PNVV+YN +I G C  G+MD++   F  M      PD  T++ L++G+ + 
Sbjct: 507 DMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKN 566

Query: 536 NEPSKVNELLHKMKEKKV 553
                   L  +M  K V
Sbjct: 567 GRVEDALALYREMFRKDV 584



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 156/587 (26%), Positives = 276/587 (47%), Gaps = 53/587 (9%)

Query: 55  DYMLRMHPS---PPPVSSFNILLASLAKNKHYDTRL------NATGLF---PNLYTYNIL 102
           D + R  P     P V S+N L+  L   K     L       A G +   PN+ +Y+ +
Sbjct: 150 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTI 209

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ F K G V   +  F  ++   F P+  T++SLI GL     + +A A+   +   G 
Sbjct: 210 IDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV 269

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN  TYN +I G C  G    A+ L ++M+ G+G      +P+ VTY  +I   CK G 
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS-GSG-----LQPDVVTYILLIQYYCKIGR 323

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHG------LCHANDW------------------ 258
             +A+++F  M  +   P+   Y+ L+HG      L    D                   
Sbjct: 324 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 383

Query: 259 -----------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
                      ++A   F EM   G++P VV+++ ++  LCK  ++++A    + MV  G
Sbjct: 384 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG 443

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + PN  ++ +L+ G C +G+  + EEL   M + G   D +  N +++  CK   V EA 
Sbjct: 444 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 503

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
             +  ++  G+KP VV+YNTL  G   + +++ ++K FD M   G+  D+ TY   ++G 
Sbjct: 504 DFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGY 563

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            KNG + +A+ L+R +     +      N ++ GL ++GR+  A EL+  +        +
Sbjct: 564 FKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRI 623

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            TYN ++ GLC +  +D+A  +F D+       DV TF+++I+  +++    +   L   
Sbjct: 624 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSA 683

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           M  +  +P     S+++   ++  +  +S   FL  E+ G   +S++
Sbjct: 684 MVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHM 730


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/576 (32%), Positives = 296/576 (51%), Gaps = 45/576 (7%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIG 110
           +L+  P  P V  FN L+  L + +  D        +  +G   ++ TYNIL+   CK+ 
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359

Query: 111 RVSLGF--IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF-GCEPNVI 167
           R+   +  +   R    C +PN  TF++LI+GL    R+ +A  ++ ++ A  G  PN  
Sbjct: 360 RIPEAYRHVELMRRTEGC-SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV---------------VCKPNTVTYST 212
           TY  L+ GLC+ G +      FE+M                        VC+P  VTY+T
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNT 478

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ GL K G V  A  L   M +  ++PDV+T+NS++ GLC      +A  +F   +++G
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 538

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P+VVT++ ++D L K  KMDEA +LL  MV+ G R N  TY+T++DG   +G++  A 
Sbjct: 539 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   M   GC  D V+YN LI+G+ K + + EA+ L REM+  G  P+VVTY TL  GL
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELD 451
               + + A+++ D M   G A +  TY++ +DGLCK G + EA+  F  + R       
Sbjct: 659 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 718

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + AY+ LIDGLCK+GR+  A+E    +     +P+VVT++I+I GLC+ G++D   +LF 
Sbjct: 719 VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN- 570
            M E     D+  ++ +I+ +    E S    LL +MK   +  +     IV+  L  N 
Sbjct: 779 GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838

Query: 571 ------------------EISLKSLPSFLVQERQGE 588
                             EIS  +L + LV  R+ E
Sbjct: 839 RIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSE 874



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/569 (29%), Positives = 274/569 (48%), Gaps = 71/569 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNI 101
            EAF + + M   +  PP + +F +++  L K    +            G  P++  + +
Sbjct: 88  KEAFSLLERMA-ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTV 146

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++  C++GRV   +  F ++L   FTP+A T+N+++ GL+   R+  A  +   L    
Sbjct: 147 LLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESF 206

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P V T+   ++GL + G+   A   F+ M     + GV   PNTVTY  +IDGLCK G
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMP----QTGV--SPNTVTYDALIDGLCKAG 260

Query: 222 FVDKAKALFLQMKDENIN--------------------------------PDVVTYNSLI 249
            +D A  L   ++D+N                                  P+VV +NSL+
Sbjct: 261 KLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLM 317

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ-RGV 308
           +GLC A   +EA  LF  M + G    V+T+N+++  LCK R++ EA R ++LM +  G 
Sbjct: 318 NGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGC 377

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESM-GCKHDDVSYNILINGYCK---NKEVE 364
            PN  T++TL+ G C  G++N+A E++  M ++ G   +  +Y  L+ G CK   ++ +E
Sbjct: 378 SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLE 437

Query: 365 EALS--LYREMVSKG----------------IKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           +     L RE  S                   +PT+VTYNTL  GL +   V  AL L +
Sbjct: 438 QCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M   G++ D  T+ + +DGLCK   I++A  +F+      C  ++  Y+ LIDGL K  
Sbjct: 498 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           ++  A +L   +       N VTY+ ++ GL   G+M+ A  +   M +    PD +T++
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            LI GF +     +   LL +M E    P
Sbjct: 618 TLIDGFFKRQRLREAVGLLREMLEAGFHP 646



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 252/484 (52%), Gaps = 30/484 (6%)

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           + TYN+LIN  CK GRV   F AF + ++  F P   T++++I GL  ++ + +   L  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++   GC PN +TYNTL+N L   G    A +L E MA  NG     C P  +T+  II 
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMA-ANG-----CPPELITFGLIIK 114

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLCKEG ++ A  +  +M D    PDV  +  L+H LC     +EA   F +++  G  P
Sbjct: 115 GLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTP 174

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
             VT+N ++D L K  +++ A  +L L+ +    P   T+   +DG    G +  A E F
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFF 234

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
            SM   G   + V+Y+ LI+G CK  +++ AL L R+   K  +  +  +++L  GL + 
Sbjct: 235 DSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQA 291

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
           H++E A++L   M       +   + + ++GLC+   + EA ELF  ++   C  D+  Y
Sbjct: 292 HRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348

Query: 456 NCLIDGLCKSGRLKFAW---ELF-----CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           N L+ GLCK  R+  A+   EL      CS       PNVVT++ +IQGLCN G++++A 
Sbjct: 349 NILLKGLCKLRRIPEAYRHVELMRRTEGCS-------PNVVTFSTLIQGLCNAGRVNQAW 401

Query: 508 DLFLDM-EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS--IVSIVV 564
           +++  M      +P+  T+  L+ G  +  +  ++ +   +M E++    +S  I S  V
Sbjct: 402 EVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEV 461

Query: 565 DLLV 568
           D L+
Sbjct: 462 DFLM 465



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 252/524 (48%), Gaps = 53/524 (10%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V +++ L+  L+K    D  L         G   N  TY+ +++   K+GR+    + 
Sbjct: 541  PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 600

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++  +   P+A T+N+LI G     R+ EA  L  ++   G  P+V+TY TL +GLCR
Sbjct: 601  LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 660

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDEN 237
            +G    A+ + + MA         C PN +TYS+I+DGLCK G V +A   F +M +DE 
Sbjct: 661  SGRFDEAVEILDYMAARG------CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714

Query: 238  INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
            + P V+ Y++LI GLC A   +EA      M+  G  P VVTF+++++ LC   ++D   
Sbjct: 715  VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 774

Query: 298  RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK------------- 344
             L   M +RG + +   YN +++ +CL G+ + A  L   M++ G               
Sbjct: 775  ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKAL 834

Query: 345  --------------------HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                                 D++SYN LI     ++  E+AL L R MV+ G  P    
Sbjct: 835  CGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACN 894

Query: 385  YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            Y T+  GLF+    E A KL  EM+  G + D RTYT  I GL K   +  A + F  + 
Sbjct: 895  YMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEML 954

Query: 445  ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                + D   Y+ LID  CK+ ++  AW+L   L    + P +  Y+ M+  LC +   D
Sbjct: 955  RKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTD 1011

Query: 505  KARDLFLDMEENAAAPDVITFDMLIHGFI---RINEPSK-VNEL 544
            KA ++  +M+     P +  +  L   ++   R++E  K VN+L
Sbjct: 1012 KALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/555 (29%), Positives = 264/555 (47%), Gaps = 53/555 (9%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P + ++N L+  L+K+      L        +GL P++ T+N +++  CK  R+      
Sbjct: 471  PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F R L     PN  T+++LI GL   +++ EA  L  K+   GC  N +TY+T+++GL +
Sbjct: 531  FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G    A+ +  +M +        C P+ VTY+T+IDG  K   + +A  L  +M +   
Sbjct: 591  VGRMEDAVVVLRQMRDAG------CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF 644

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRL---------------------------------- 264
            +P VVTY +L HGLC +  ++EA  +                                  
Sbjct: 645  HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 704

Query: 265  FIEMM--DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            + E M  D+ V P V+ ++ ++D LCK  ++DEA   L+ M++ G  P+  T++ L++G 
Sbjct: 705  YFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764

Query: 323  CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
            C  G+I+   ELF  M   GCK D  +YN +IN YC   E   A +L  EM + GI    
Sbjct: 765  CDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824

Query: 383  VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            VT+  +   L    +++ A+  F  +  D    D  +Y T I  L  +    +A+EL R 
Sbjct: 825  VTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRA 882

Query: 443  LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
            +       D   Y  ++DGL K+G  + A +L   +      P++ TY IMI GL    Q
Sbjct: 883  MVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQ 942

Query: 503  MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            +  A D F +M      PD I +  LI  F + +   KV++    ++   + P  ++ S 
Sbjct: 943  LPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKAD---KVDDAWKLLRSSGIEPTITMYST 999

Query: 563  VVDLLVKNEISLKSL 577
            +VD L KN  + K+L
Sbjct: 1000 MVDSLCKNRGTDKAL 1014



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 249/535 (46%), Gaps = 47/535 (8%)

Query: 69  SFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++N+L+  L K         A       G  P + TY+ +I+  C+   V  G      +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 PNA T+N+L+  L  + R  EA +L  ++ A GC P +IT+  +I GLC+ G  
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  + +EM +     G V  P+   ++ ++  LC+ G VD+A   F Q+      PD 
Sbjct: 123 EAAFRVVDEMVDR----GFV--PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDA 176

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTYN+++ GL  A     A  +   + +    P+V TF + +D L K   +  A    D 
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDS 236

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M Q GV PN  TY+ L+DG C  GK++ A    G +     +    +++ L++G C+   
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLDIA---LGLLRDKNSQAGMFAFSSLLHGLCQAHR 293

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +EEA+ L + M      P VV +N+L  GL +  +V+ A +LFD M+  G +AD  TY  
Sbjct: 294 LEEAIQLLKAMPC---VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNI 350

Query: 423 FIDGLCKNGYIIEA---VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL- 478
            + GLCK   I EA   VEL R  R   C  ++  ++ LI GLC +GR+  AWE++  + 
Sbjct: 351 LLKGLCKLRRIPEAYRHVELMR--RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408

Query: 479 -PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE---------------------N 516
              G+  PN  TY  +++GLC  G   +    F  M E                      
Sbjct: 409 AVEGI-SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              P ++T++ L+ G  +         LL  M E  + PD    + V+D L K +
Sbjct: 468 VCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQ 522



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 188/459 (40%), Gaps = 105/459 (22%)

Query: 86   RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            ++   G  P+  TYN LI+ F K  R+         +L + F P+  T+ +L  GL    
Sbjct: 603  QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 662

Query: 146  RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            R  EA  +   + A GC PN ITY+++++GLC+ G    AL  FE+MA        V  P
Sbjct: 663  RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE-----VVAP 717

Query: 206  NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN--------- 256
            + + YS +IDGLCK G +D+A     +M      PDVVT++ LI+GLC A          
Sbjct: 718  HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 777

Query: 257  --------------------------DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
                                      +++ A  L  EM   G+  + VT  +++  LC N
Sbjct: 778  CGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN 837

Query: 291  RKMDEA--------------------------SR-------LLDLMVQRGVRPNACTYNT 317
             ++DEA                          SR       LL  MV  G  P+AC Y T
Sbjct: 838  DRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMT 897

Query: 318  LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK- 376
            +MDG    G    A +L   M S G   D  +Y I+I+G  K K++  A   + EM+ K 
Sbjct: 898  VMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN 957

Query: 377  -------------------------------GIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
                                           GI+PT+  Y+T+   L +    + AL++ 
Sbjct: 958  LKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVI 1017

Query: 406  DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
             EM+          +T+        G + EAV+L   L+
Sbjct: 1018 REMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 111/222 (50%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+YN+LING CK   V +A + +R+ +  G +PTVVTY+T+  GL   ++V+   KL +E
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G A +  TY T ++ L   G   EA  L   +    C  ++  +  +I GLCK G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A+ +   +     VP+V  + +++  LC  G++D+A   F  +      PD +T++ 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++ G  +         +L  + E    P     +I VD L K
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSK 223


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 178/541 (32%), Positives = 290/541 (53%), Gaps = 23/541 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD       +A+  +  ML    SP  V +++ ++A+L K +  D      T +   G
Sbjct: 208 KEGD-----SGKAYSTYHEMLDRRISPD-VVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 92  LFPNLYTYNILINCFCKIG--RVSLGFIAFGR---ILRSCFTPNAATFNSLIKGLHAESR 146
           + PN  TY  +++ +C  G  + ++GF+   R   +      P+ AT+ +L++G   +  
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           ++   AL   +   G  P+   YN LI    + G    A+ +F +M            P+
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG------LNPD 375

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY  +I  LCK G V+ A   F QM DE ++P  + YNSLIHGLC  N W  A+ L +
Sbjct: 376 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 435

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+D+G+  + + FN I+D  CK  ++ E+ +L DLMV+ GV+P+  TY+TL+DG+CL G
Sbjct: 436 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 495

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K++ A +L   M S+G K + V+Y  LINGYCK   + +AL L++EM S G+ P ++TYN
Sbjct: 496 KMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYN 555

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GLF+  +   A +L+  +   G   +  TY   + GLCKN    +A+ +F+ L ++
Sbjct: 556 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLM 615

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +L+ + +N +ID L K GR   A +LF +     LVPN  TY +M + +   G +++ 
Sbjct: 616 DLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 675

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LFL ME+N    D    + ++   ++  E ++    L  + EK    +AS  S+ +DL
Sbjct: 676 DQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDL 735

Query: 567 L 567
           L
Sbjct: 736 L 736



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 177/581 (30%), Positives = 285/581 (49%), Gaps = 53/581 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P ++TY 
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI C C+  R+ LGF A G +++  F   A TF  L+KGL A+ R  +A  +   ++  
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
             C P+V +   L+ GLC    +  AL L   MA+G G       P+ V+Y+T+I+G  K
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSA---PDVVSYTTVINGFFK 208

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG   KA + + +M D  I+PDVVTY+S+I  LC     ++A  +   M+  GV P+  T
Sbjct: 209 EGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRT 268

Query: 280 FNVIMDELCKNRKMDEA----------------------------------------SRL 299
           +  IM   C + +  EA                                          L
Sbjct: 269 YTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHAL 328

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           LDLMV+ G+ P+   YN L+  +   GK++ A  +F  M   G   D V+Y  +I   CK
Sbjct: 329 LDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCK 388

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           +  VE+A+  + +M+ +G+ P  + YN+L  GL   ++ E A +L  EM   G+  +T  
Sbjct: 389 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 448

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           + + ID  CK G +IE+ +LF  +  +  + DI  Y+ LIDG C +G++  A +L   + 
Sbjct: 449 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMV 508

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              L PN VTY  +I G C   +M  A  LF +ME +  +PD+IT+++++ G  +    +
Sbjct: 509 SVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 568

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
              EL  ++ E     + S  +I++  L KN+++  +L  F
Sbjct: 569 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF 609



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 271/540 (50%), Gaps = 18/540 (3%)

Query: 59  RMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRV 112
           R   S P V S+  ++    K     K Y T   +    + P++ TY+ +I   CK   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN-----VI 167
                    ++++   PN  T+ S++ G  +  +  EA     K+++ G EP+     + 
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIA 307

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           TY TL+ G    G  ++ ++   ++   NG       P+   Y+ +I    K+G VD+A 
Sbjct: 308 TYCTLLQGYATKG-ALVGMHALLDLMVRNG-----IHPDHYVYNILICAYAKQGKVDEAM 361

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F +M+ + +NPD VTY ++I  LC +    +A   F +M+D+G+ P  + +N ++  L
Sbjct: 362 LVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 421

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C   K + A  L+  M+ RG+  N   +N+++D  C  G++  +E+LF  M  +G K D 
Sbjct: 422 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 481

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           ++Y+ LI+GYC   +++EA+ L   MVS G+KP  VTY TL  G  +I ++  AL LF E
Sbjct: 482 ITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKE 541

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+  GV+ D  TY   + GL +      A EL+  +     ++++  YN ++ GLCK+  
Sbjct: 542 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 601

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
              A  +F +L    L     T+NIMI  L   G+  +A+DLF+    N   P+  T+ +
Sbjct: 602 TDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRL 661

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-DLLVKNEISLKSLPSFLVQERQ 586
           +    I      ++++L   M++     D+ +++ +V +LL + EI+       ++ E+ 
Sbjct: 662 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 721



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 190/423 (44%), Gaps = 52/423 (12%)

Query: 53  IFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILIN 104
           + D M+R  +HP       +NIL+ + AK    D      +++   GL P+  TY  +I 
Sbjct: 328 LLDLMVRNGIHPDH---YVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL----------------------- 141
             CK GRV    + F +++    +P    +NSLI GL                       
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 142 -----------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
                      H  E R++E+  LF  +   G +P++ITY+TLI+G C  G    A+ L 
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
                 +G + V  KPNTVTY T+I+G CK   +  A  LF +M+   ++PD++TYN ++
Sbjct: 505 ------SGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            GL        AK L++ + + G Q  + T+N+I+  LCKN+  D+A R+   +    ++
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 618

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
             A T+N ++D    +G+   A++LF +  S G   +  +Y ++         +EE   L
Sbjct: 619 LEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 678

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  M   G        N +   L +  ++  A      +     + +  T + FID L  
Sbjct: 679 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 738

Query: 430 NGY 432
             Y
Sbjct: 739 GKY 741



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 180/413 (43%), Gaps = 14/413 (3%)

Query: 185 ALNLFEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           A++ +  MA  G G++     P   TY+ +I   C+   +D   A    +  +    + +
Sbjct: 68  AVSRYNRMARAGAGKV----TPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAI 123

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           T+  L+ GLC     ++A  + +  M +    P V +  +++  LC   +  EA  L  +
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHM 183

Query: 303 MVQR---GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           M      G  P+  +Y T+++GF   G   +A   +  M       D V+Y+ +I   CK
Sbjct: 184 MADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD--- 416
            + +++A+ +   MV  G+ P   TY ++  G     Q + A+    +++ DGV  D   
Sbjct: 244 GQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLE 303

Query: 417 --TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
               TY T + G    G ++    L   +       D   YN LI    K G++  A  +
Sbjct: 304 PDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLV 363

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    L P+ VTY  +I  LC  G+++ A   F  M +   +P  I ++ LIHG   
Sbjct: 364 FSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 423

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            N+  +  EL+ +M ++ +  +    + ++D   K    ++S   F +  R G
Sbjct: 424 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 476


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 191/567 (33%), Positives = 303/567 (53%), Gaps = 45/567 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD++     +A+  +  ML      P V +++ ++A+L K +  D      T +   G
Sbjct: 211 KEGDLD-----KAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 92  LFPNLYTYNILINCFCKIG--RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  G  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLK--KMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG------------- 195
           A  +F  +   G +P + TY TL+ G    G  +    L + M  NG             
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 196 ----NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                G++                P+TVTY T+I  LCK G V+ A   F QM DE ++P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
             + YNSLIH LC  + W++AK L +EM+D+G+    + FN I+D  CK  ++ E+ +L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLMV+ GV+P+  TY+TL+DG+CL GK++ A +L  SM S+G K D V+YN LINGYCK 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +E+AL L+REM S G+ P ++TYN +  GLF+  +   A +L+  +   G   +  TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR   A +LF +L  
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+V TY++M + L   G +++  DLFL MEEN    +    + ++   ++  + ++
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
               L  + EK    +AS  S+ +DLL
Sbjct: 743 AGTYLFMIDEKHFSLEASTASLFLDLL 769



 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 178/602 (29%), Positives = 280/602 (46%), Gaps = 119/602 (19%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + PNL TY 
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI   C  GR+ LGF A G +++  F  +A  F  L+KGL A+ R  +A  +   ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNV +YN L+ GLC    +  AL L + M +  G+    C P+ V+Y+T+I+G  K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFK 211

Query: 220 EGFVDKAKALFLQMKDENINPDVVTY---------------------------------- 245
           EG +DKA   + +M D  I P+VVTY                                  
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 246 -NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            NS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA ++ D M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 305 QRGVRPNACTYNTLMDGFCL-----------------------------------MGKIN 329
           +RG++P   TY TL+ G+                                      GK++
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL- 388
           +A  +F  M   G   D V+Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L 
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 389 ------------------------------FLGLFEIH----QVEHALKLFDEMQRDGVA 414
                                         F  + + H    +V  + KLFD M R GV 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY+T IDG C  G + EA +L  ++  +  + D   YN LI+G CK  R++ A  L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    + P+++TYNI++QGL    +   A++L++ + E+    ++ T+++++HG  +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 535 IN 536
            N
Sbjct: 632 NN 633



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 287/571 (50%), Gaps = 41/571 (7%)

Query: 57  MLRMHPS-----PPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINC 105
           +L+M P      PP V S+  ++    K    +K Y T   +   G+ PN+ TY+ +I  
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK   +         ++++   PN  T+NS++ G  +  +  EA     K+ + G EP+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIGVVCK------ 204
           V+TYN+L++ LC+ G    A  +F+ M                 G    G + +      
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 205 --------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   PN   +S +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC + 
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A R F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ RG+  +   +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++D  C  G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+KP  VTYNTL  G  +I ++E AL LF EM+  GV+ D  TY   + GL +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL+  +     +L++  YN ++ GLCK+     A  +F +L    L     T+NIMI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L   G+ D+A+DLF  +  N   PDV T+ ++    I      ++++L   M+E     +
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 557 ASIV-SIVVDLLVKNEISLKSLPSFLVQERQ 586
           + ++ SIV  LL + +I+      F++ E+ 
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP+      F+IL+ + AK    D      +++   GL P+  TY 
Sbjct: 357 EMHGLLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV      F +++    +P    +NSLI  L                   
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +P++ITY+TLI+G C  G    A
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L   M      + V  KP+ VTY+T+I+G CK   ++ A  LF +M+   ++PD++TY
Sbjct: 534 TKLLASM------VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +  
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++    T+N ++     +G+ + A++LF ++ + G   D  +Y+++     +   +EE
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N++   L +   +  A      +     + +  T + F+D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 768 LLSGGKY 774



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 38/355 (10%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC +++  +
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNI 352
           A  + L  M Q G  PN  +YN L+ G C   +   A EL   M   G  C  D VSY  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  + RT                                   YN ++ G C SG+ K A 
Sbjct: 265 VMPNCRT-----------------------------------YNSIVHGYCSSGQPKEAI 289

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                +    + P+VVTYN ++  LC +G+  +AR +F  M +    P++ T+  L+ G+
Sbjct: 290 GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGY 349

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                  +++ LL  M    + P+  + SI++    K     +++  F    +QG
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 191/567 (33%), Positives = 303/567 (53%), Gaps = 45/567 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD++     +A+  +  ML      P V +++ ++A+L K +  D      T +   G
Sbjct: 211 KEGDLD-----KAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 92  LFPNLYTYNILINCFCKIG--RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  G  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLK--KMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG------------- 195
           A  +F  +   G +P + TY TL+ G    G  +    L + M  NG             
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 196 ----NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                G++                P+TVTY T+I  LCK G V+ A   F QM DE ++P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
             + YNSLIH LC  + W++AK L +EM+D+G+    + FN I+D  CK  ++ E+ +L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLMV+ GV+P+  TY+TL+DG+CL GK++ A +L  SM S+G K D V+YN LINGYCK 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +E+AL L+REM S G+ P ++TYN +  GLF+  +   A +L+  +   G   +  TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR   A +LF +L  
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+V TY++M + L   G +++  DLFL MEEN    +    + ++   ++  + ++
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
               L  + EK    +AS  S+ +DLL
Sbjct: 743 AGTYLFMIDEKHFSLEASTASLFLDLL 769



 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 178/602 (29%), Positives = 280/602 (46%), Gaps = 119/602 (19%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + PNL TY 
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI   C  GR+ LGF A G +++  F  +A  F  L+KGL A+ R  +A  +   ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNV +YN L+ GLC    +  AL L + M +  G+    C P+ V+Y+T+I+G  K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFK 211

Query: 220 EGFVDKAKALFLQMKDENINPDVVTY---------------------------------- 245
           EG +DKA   + +M D  I P+VVTY                                  
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 246 -NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            NS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA ++ D M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 305 QRGVRPNACTYNTLMDGFCL-----------------------------------MGKIN 329
           +RG++P   TY TL+ G+                                      GK++
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL- 388
           +A  +F  M   G   D V+Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L 
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 389 ------------------------------FLGLFEIH----QVEHALKLFDEMQRDGVA 414
                                         F  + + H    +V  + KLFD M R GV 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY+T IDG C  G + EA +L  ++  +  + D   YN LI+G CK  R++ A  L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    + P+++TYNI++QGL    +   A++L++ + E+    ++ T+++++HG  +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 535 IN 536
            N
Sbjct: 632 NN 633



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 287/571 (50%), Gaps = 41/571 (7%)

Query: 57  MLRMHPS-----PPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINC 105
           +L+M P      PP V S+  ++    K    +K Y T   +   G+ PN+ TY+ +I  
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK   +         ++++   PN  T+NS++ G  +  +  EA     K+ + G EP+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIGVVCK------ 204
           V+TYN+L++ LC+ G    A  +F+ M                 G    G + +      
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 205 --------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   PN   +S +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC + 
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A R F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ RG+  +   +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++D  C  G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+KP  VTYNTL  G  +I ++E AL LF EM+  GV+ D  TY   + GL +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL+  +     +L++  YN ++ GLCK+     A  +F +L    L     T+NIMI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L   G+ D+A+DLF  +  N   PDV T+ ++    I      ++++L   M+E     +
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 557 ASIV-SIVVDLLVKNEISLKSLPSFLVQERQ 586
           + ++ SIV  LL + +I+      F++ E+ 
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP+      F+IL+ + AK    D      +++   GL P+  TY 
Sbjct: 357 EMHGLLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV      F +++    +P    +NSLI  L                   
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +P++ITY+TLI+G C  G    A
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L   M      + V  KP+ VTY+T+I+G CK   ++ A  LF +M+   ++PD++TY
Sbjct: 534 TKLLASM------VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +  
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++    T+N ++     +G+ + A++LF ++ + G   D  +Y+++     +   +EE
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N++   L +   +  A      +     + +  T + F+D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 768 LLSGGKY 774



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 155/318 (48%), Gaps = 3/318 (0%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P++ T+ +++   C   ++D     L  ++++G R +A  +  L+ G C   + + A 
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 333 EL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLF 389
           ++    M  +GC  +  SYNIL+ G C     +EAL L + M   G    P VV+Y T+ 
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G F+   ++ A   + EM   G+  +  TY++ I  LCK   + +A+E+  ++      
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            + + YN ++ G C SG+ K A      +    + P+VVTYN ++  LC +G+  +AR +
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  M +    P++ T+  L+ G+       +++ LL  M    + P+  + SI++    K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 570 NEISLKSLPSFLVQERQG 587
                +++  F    +QG
Sbjct: 387 QGKVDQAMLVFSKMRQQG 404


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 191/567 (33%), Positives = 303/567 (53%), Gaps = 45/567 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD++     +A+  +  ML      P V +++ ++A+L K +  D      T +   G
Sbjct: 211 KEGDLD-----KAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 92  LFPNLYTYNILINCFCKIG--RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  G  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLK--KMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG------------- 195
           A  +F  +   G +P + TY TL+ G    G  +    L + M  NG             
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 196 ----NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                G++                P+TVTY T+I  LCK G V+ A   F QM DE ++P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
             + YNSLIH LC  + W++AK L +EM+D+G+    + FN I+D  CK  ++ E+ +L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLMV+ GV+P+  TY+TL+DG+CL GK++ A +L  SM S+G K D V+YN LINGYCK 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +E+AL L+REM S G+ P ++TYN +  GLF+  +   A +L+  +   G   +  TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR   A +LF +L  
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+V TY++M + L   G +++  DLFL MEEN    +    + ++   ++  + ++
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
               L  + EK    +AS  S+ +DLL
Sbjct: 743 AGTYLFMIDEKHFSLEASTASLFLDLL 769



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 181/635 (28%), Positives = 292/635 (45%), Gaps = 119/635 (18%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + PNL TY 
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI   C  GR+ LGF A G +++  F  +A  F  L+KGL A+ R  +A  +   ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNV +YN L+ GLC    +  AL L + M +  G+    C P+ V+Y+T+I+G  K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFK 211

Query: 220 EGFVDKAKALFLQMKDENINPDVVTY---------------------------------- 245
           EG +DKA   + +M D  I P+VVTY                                  
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 246 -NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            NS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA ++ D M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 305 QRGVRPNACTYNTLMDGFCL-----------------------------------MGKIN 329
           +RG++P   TY TL+ G+                                      GK++
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL- 388
           +A  +F  M   G   D V+Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L 
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 389 ------------------------------FLGLFEIH----QVEHALKLFDEMQRDGVA 414
                                         F  + + H    +V  + KLFD M R GV 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY+T IDG C  G + EA +L  ++  +  + D   YN LI+G CK  R++ A  L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    + P+++TYNI++QGL    +   A++L++ + E+    ++ T+++++HG  +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            N   +   +   +    +  +    +I++  L+K
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 287/571 (50%), Gaps = 41/571 (7%)

Query: 57  MLRMHPS-----PPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINC 105
           +L+M P      PP V S+  ++    K    +K Y T   +   G+ PN+ TY+ +I  
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK   +         ++++   PN  T+NS++ G  +  +  EA     K+ + G EP+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIGVVCK------ 204
           V+TYN+L++ LC+ G    A  +F+ M                 G    G + +      
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 205 --------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   PN   +S +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC + 
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A R F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ RG+  +   +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++D  C  G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+KP  VTYNTL  G  +I ++E AL LF EM+  GV+ D  TY   + GL +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL+  +     +L++  YN ++ GLCK+     A  +F +L    L     T+NIMI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L   G+ D+A+DLF  +  N   PDV T+ ++    I      ++++L   M+E     +
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 557 ASIV-SIVVDLLVKNEISLKSLPSFLVQERQ 586
           + ++ SIV  LL + +I+      F++ E+ 
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP+      F+IL+ + AK    D      +++   GL P+  TY 
Sbjct: 357 EMHGLLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV      F +++    +P    +NSLI  L                   
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +P++ITY+TLI+G C  G    A
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L   M      + V  KP+ VTY+T+I+G CK   ++ A  LF +M+   ++PD++TY
Sbjct: 534 TKLLASM------VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +  
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++    T+N ++     +G+ + A++LF ++ + G   D  +Y+++     +   +EE
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N++   L +   +  A      +     + +  T + F+D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 768 LLSGGKY 774



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 38/355 (10%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC +++  +
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNI 352
           A  + L  M Q G  PN  +YN L+ G C   +   A EL   M   G  C  D VSY  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  + RT                                   YN ++ G C SG+ K A 
Sbjct: 265 VMPNCRT-----------------------------------YNSIVHGYCSSGQPKEAI 289

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                +    + P+VVTYN ++  LC +G+  +AR +F  M +    P++ T+  L+ G+
Sbjct: 290 GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGY 349

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                  +++ LL  M    + P+  + SI++    K     +++  F    +QG
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  311 bits (796), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 193/567 (34%), Positives = 305/567 (53%), Gaps = 45/567 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD++     +A+  +  ML      P V +++ ++A+L K +  D      T +   G
Sbjct: 211 KEGDLD-----KAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 92  LFPNLYTYNILINCFCKIG--RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  G  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLK--KMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG------------- 195
           A  +F  +   G +P + TY TL+ G    G  +    L + M  NG             
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 196 ----NGEIG----VVCK-------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                G++     V  K       P+TVTY T+I  LCK G V+ A   F QM DE ++P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
             + YNSLIH LC  + W++AK L +EM+D+G+    + FN I+D  CK  ++ E+ +L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLMV+ GV+P+  TY+TL+DG+CL GK++ A +L  SM S+G K D V+YN LINGYCK 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +E+AL L+REM S G+ P ++TYN +  GLF+  +   A +L+  +   G   +  TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR   A +LF +L  
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+V TY++M + L   G +++  DLFL MEEN    +    + ++   ++  + ++
Sbjct: 683 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 742

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
               L  + EK    +AS  S+ +DLL
Sbjct: 743 AGTYLFMIDEKHFSLEASTASLFLDLL 769



 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 179/635 (28%), Positives = 292/635 (45%), Gaps = 119/635 (18%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + PNL TY 
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           IL+   C  GR+ LGF A G +++  F  +A  F  ++KGL A+ R  +A  +   ++  
Sbjct: 96  ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNV +YN L+ GLC    +  AL L + M +  G+    C P+ V+Y+T+I+G  K
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFK 211

Query: 220 EGFVDKAKALFLQMKDENINPDVVTY---------------------------------- 245
           EG +DKA   + +M D  I P+VVTY                                  
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 246 -NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            NS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA ++ D M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 305 QRGVRPNACTYNTLMDGFCL-----------------------------------MGKIN 329
           +RG++P   TY TL+ G+                                      GK++
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL- 388
           +A  +F  M   G   D V+Y  +I   CK+  VE+A+  + +M+ + + P  + YN+L 
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 389 ------------------------------FLGLFEIH----QVEHALKLFDEMQRDGVA 414
                                         F  + + H    +V  + KLFD M R GV 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY+T IDG C  G + EA +L  ++  +  + D   YN LI+G CK  R++ A  L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    + P+++TYNI++QGL    +   A++L++ + E+    ++ T+++++HG  +
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            N   +   +   +    +  +    +I++  L+K
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 287/571 (50%), Gaps = 41/571 (7%)

Query: 57  MLRMHPS-----PPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINC 105
           +L+M P      PP V S+  ++    K    +K Y T   +   G+ PN+ TY+ +I  
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK   +         ++++   PN  T+NS++ G  +  +  EA     K+ + G EP+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIGVVCK------ 204
           V+TYN+L++ LC+ G    A  +F+ M                 G    G + +      
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 205 --------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   PN   +S +I    K+G VD+A  +F +M+ + +NPD VTY ++I  LC + 
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A R F +M+D+ + P  + +N ++  LC   K D+A  L+  M+ RG+  +   +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++D  C  G++  +E+LF  M  +G K D ++Y+ LI+GYC   +++EA  L   MVS 
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+KP  VTYNTL  G  +I ++E AL LF EM+  GV+ D  TY   + GL +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL+  +     +L++  YN ++ GLCK+     A  +F +L    L     T+NIMI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L   G+ D+A+DLF  +  N   PDV T+ ++    I      ++++L   M+E     +
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 557 ASIV-SIVVDLLVKNEISLKSLPSFLVQERQ 586
           + ++ SIV  LL + +I+      F++ E+ 
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 52/427 (12%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           E   + D M+R  +HP+      F+IL+ + AK    D      +++   GL P+  TY 
Sbjct: 357 EMHGLLDLMVRNGIHPNH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
            +I   CK GRV      F +++    +P    +NSLI  L                   
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473

Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
                          H  E R++E+  LF  +   G +P++ITY+TLI+G C  G    A
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L   M      + V  KP+ VTY+T+I+G CK   ++ A  LF +M+   ++PD++TY
Sbjct: 534 TKLLASM------VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N ++ GL        AK L++ + + G Q  + T+N+I+  LCKN   DEA R+   +  
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             ++    T+N ++     +G+ + A++LF ++ + G   D  +Y+++     +   +EE
Sbjct: 648 TDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEE 707

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L+  M   G        N++   L +   +  A      +     + +  T + F+D
Sbjct: 708 LDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767

Query: 426 GLCKNGY 432
            L    Y
Sbjct: 768 LLSGGKY 774



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 38/355 (10%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + P++ TY  L+   C A   +        ++ +G     + F  ++  LC +++  +
Sbjct: 85  DEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSD 144

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNI 352
           A  + L  M Q G  PN  +YN L+ G C   +   A EL   M   G  C  D VSY  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  + RT                                   YN ++ G C SG+ K A 
Sbjct: 265 VMPNCRT-----------------------------------YNSIVHGYCSSGQPKEAI 289

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                +    + P+VVTYN ++  LC +G+  +AR +F  M +    P++ T+  L+ G+
Sbjct: 290 GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGY 349

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                  +++ LL  M    + P+  + SI++    K     +++  F    +QG
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  311 bits (796), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 212/648 (32%), Positives = 324/648 (50%), Gaps = 88/648 (13%)

Query: 9   RSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS 68
           RS    S  +S     FS+L+    D   + G I+     EA  +FD M+      P V 
Sbjct: 347 RSLRDGSLRVSPDTVTFSTLI----DGLCKCGQID-----EACSVFDDMI-AGGYVPNVI 396

Query: 69  SFNILLASLAKNKHYDTRLNA-------TGLFPNLYTYNILINCFCKIGRVSLGF-IAFG 120
           ++N L+  L K    + R +A        G+ P++ TY++L++ FCK  RV     +  G
Sbjct: 397 TYNALVNGLCKADKME-RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 455

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK-AFGCEPNVITYNTLINGLCRT 179
              R C TPN  TFNS+I GL    R  EA  +F  +    G  P+ ITY TLI+GL RT
Sbjct: 456 MASRGC-TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT 514

Query: 180 GHTMIALNLFEEMA-----------NGNGEIGVVCK--------------PNTVTYSTII 214
           G    A  L + M            NG  ++G V +              P+ VT++ +I
Sbjct: 515 GRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G CK G  ++A ALF +M  +N+ PDV+T+ +LI GLC A     A+ +   M + GV 
Sbjct: 575 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 634

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+VVT+N ++  LCK+ +++EA + L+ MV  G  P++ TY +L+   C   + + A +L
Sbjct: 635 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL---- 390
              ++S G   D V+YNIL++G  K+ + E+A+++  EMV KG  P VVTYNTL      
Sbjct: 695 VSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCK 754

Query: 391 ----------------------------------GLFEIHQVEHALKLFDEMQRDG--VA 414
                                             GL ++ +++ A +L  EM R    V 
Sbjct: 755 AGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVL 814

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLR--ILKCELDIQAYNCLIDGLCKSGRLKFAW 472
            +  TY +F+DGLCK   + EA EL R+LR   L+   D   ++ LIDGLCK G+   A 
Sbjct: 815 PNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 874

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            +F  +  G  VPNVVTYN+++ GLC   +M++A  +   M +    PDVIT+ +L+  F
Sbjct: 875 NVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAF 934

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            + +   +  ELLH M  +   P+    + ++D L K++ S ++   F
Sbjct: 935 CKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMF 982



 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 272/532 (51%), Gaps = 51/532 (9%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNIL 102
            +A  +F+ M+  +  P  V +F  L+  L K    +        +   G+ PN+ TYN L
Sbjct: 585  QASALFEEMVAKNLQPD-VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 643

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
            ++  CK GR+         ++ S   P++ T+ SL+  L   SR  +A  L ++LK+FG 
Sbjct: 644  VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 703

Query: 163  EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV-------------------- 202
            +P+ +TYN L++GL ++G T  A+ + EEM        VV                    
Sbjct: 704  DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARR 763

Query: 203  ------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQM--KDENINPDVVTYNSL 248
                        C PN VTYS +I+GLCK G +D+A+ L  +M  K  ++ P+++TYNS 
Sbjct: 764  LHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823

Query: 249  IHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            + GLC  +   EA  L   + D    V P  VTF+ ++D LCK  + DEA  + D M+  
Sbjct: 824  LDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883

Query: 307  GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            G  PN  TYN LM+G C   K+ RA  +  SM   G   D ++Y++L++ +CK   V+EA
Sbjct: 884  GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943

Query: 367  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ-RDGVAADTRTYTTFID 425
            L L   M S+G  P VVT+N++  GL +  Q   A ++FD+M  + G+A D  TY T ID
Sbjct: 944  LELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLID 1003

Query: 426  GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            GL + G+  +A  L   +     + D  A+NC I+GL K G +  A      L    LVP
Sbjct: 1004 GLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVP 1056

Query: 486  NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
            + VT+NI+I G C  G  ++A  LF +M      PDV+TF  LI G  +  +
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108



 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 280/545 (51%), Gaps = 45/545 (8%)

Query: 67  VSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           V+ +NI+L SL +          +   +   G+ P + TYN +IN  CK   +  G   F
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             ++     P+  T+N+LI  L     + EA  L   + +  C PNV+TY+ LINGLC+ 
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-- 237
           G    A  L +EM   + ++     PN +TY++ +DGLCK+    +A  L   ++D +  
Sbjct: 300 GRIDEARELIQEMTRKSCDV----LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 355

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++PD VT+++LI GLC     +EA  +F +M+  G  P+V+T+N +++ LCK  KM+ A 
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +++ MV +GV P+  TY+ L+D FC   +++ A EL   M S GC  + V++N +I+G 
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475

Query: 358 CKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLF----------------------- 393
           CK+    EA  ++ +M  K G+ P  +TY TL  GLF                       
Sbjct: 476 CKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAF 535

Query: 394 --------EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
                   ++  V  AL++++ M    +  D  T+   I G CK G   +A  LF  +  
Sbjct: 536 NCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 595

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              + D+  +  LIDGLCK+G+++ A ++   + +  + PNVVTYN ++ GLC  G++++
Sbjct: 596 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A     +M  +   PD IT+  L++   R +      +L+ ++K     PD    +I+VD
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715

Query: 566 LLVKN 570
            L K+
Sbjct: 716 GLWKS 720



 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 288/549 (52%), Gaps = 26/549 (4%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASL---AKNKHYDTRLNATGLFPNLYTYNILIN 104
             EAF +FD M   H   P   ++  L+  L    +    +  L+A    P+ Y +N  IN
Sbjct: 482  GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP-DPDTYAFNCCIN 540

Query: 105  CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
               K+G VS     + R+L     P+  TFN LI G        +A+ALF ++ A   +P
Sbjct: 541  GLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 600

Query: 165  NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
            +V+T+  LI+GLC+ G    A ++ + M N    +GV   PN VTY+ ++ GLCK G ++
Sbjct: 601  DVMTFGALIDGLCKAGQVEAARDILDLMGN----LGV--PPNVVTYNALVHGLCKSGRIE 654

Query: 225  KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            +A     +M      PD +TY SL++ LC A+  ++A +L  E+   G  P  VT+N+++
Sbjct: 655  EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV 714

Query: 285  DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM--- 341
            D L K+ + ++A  +L+ MV +G  P+  TYNTL+D  C  G +  A  L G M S    
Sbjct: 715  DGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSR 774

Query: 342  GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVE 399
             C  + V+Y++LING CK   ++EA  L +EM+ K   + P ++TYN+   GL +   + 
Sbjct: 775  CCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMA 834

Query: 400  HALKLFDEMQRDG---VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             A +L   + RDG   V+ DT T++T IDGLCK G   EA  +F  +       ++  YN
Sbjct: 835  EACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYN 893

Query: 457  CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
             L++GLCK+ +++ A  +  S+    + P+V+TY++++   C    +D+A +L   M   
Sbjct: 894  VLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953

Query: 517  AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK-VMPDASIVSIVVDLLVKN----- 570
               P+V+TF+ +I G  + ++  +  ++   M  K  + PD      ++D L +      
Sbjct: 954  GCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQ 1013

Query: 571  -EISLKSLP 578
             E+ L ++P
Sbjct: 1014 AEVLLDAMP 1022



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 181/566 (31%), Positives = 290/566 (51%), Gaps = 53/566 (9%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            + A  +++ ML +   P  V+ FNIL+A   K  +++        + A  L P++ T+  
Sbjct: 549  SRALQVYNRMLELELVPDKVT-FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            LI+  CK G+V         +      PN  T+N+L+ GL    RI EA     ++ + G
Sbjct: 608  LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            C P+ ITY +L+  LCR   T  AL L  E+ +   +      P+TVTY+ ++DGL K G
Sbjct: 668  CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD------PDTVTYNILVDGLWKSG 721

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ---PSVV 278
              ++A  +  +M  +  +PDVVTYN+LI  LC A D  EA+RL  +M  +  +   P+VV
Sbjct: 722  QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVV 781

Query: 279  TFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFG 336
            T++V+++ LCK  ++DEA  L+  M+++   V PN  TYN+ +DG C    +  A EL  
Sbjct: 782  TYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841

Query: 337  SME--SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
            S+   S+    D V+++ LI+G CK  + +EA +++ +M++ G  P VVTYN L  GL +
Sbjct: 842  SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK 901

Query: 395  IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              ++E A  + + M   GV  D  TY+  +D  CK  ++ EA+EL   +    C  ++  
Sbjct: 902  TDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961

Query: 455  YNCLIDGLCKSGRLKFAWELF--CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            +N +IDGLCKS +   A+++F   +L HG L P+ +TY  +I GL   G   +A ++ LD
Sbjct: 962  FNSIIDGLCKSDQSGEAFQMFDDMTLKHG-LAPDKITYCTLIDGLFRTGWAGQA-EVLLD 1019

Query: 513  -----------------------------MEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
                                         M E    PD +TF++LI G  +     + + 
Sbjct: 1020 AMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASA 1079

Query: 544  LLHKMKEKKVMPDASIVSIVVDLLVK 569
            L  +M  K + PD      ++D L K
Sbjct: 1080 LFEEMVAKNLQPDVMTFGALIDGLCK 1105



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 170/517 (32%), Positives = 260/517 (50%), Gaps = 50/517 (9%)

Query: 94  PNLYTY----------------------------------NILINCFCKIGRVSLGFIAF 119
           PN +TY                                  NI++   C+ G  +     F
Sbjct: 144 PNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIF 203

Query: 120 -GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G + R    P   T+N++I GL   + +     LF +L   G  P+V+TYNTLI+ LC+
Sbjct: 204 RGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCK 263

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM--KDE 236
            G    A  L  +M++ +      C PN VTYS +I+GLCK G +D+A+ L  +M  K  
Sbjct: 264 AGDLEEARRLHGDMSSRS------CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 317

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDELCKNRKMD 294
           ++ P+++TYNS + GLC  +   EA  L   + D    V P  VTF+ ++D LCK  ++D
Sbjct: 318 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQID 377

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  + D M+  G  PN  TYN L++G C   K+ RA  +  SM   G   D ++Y++L+
Sbjct: 378 EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 437

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ-RDGV 413
           + +CK   V+EAL L   M S+G  P VVT+N++  GL +  +   A ++FD+M  + G+
Sbjct: 438 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGL 497

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  TY T IDGL + G   +A  L   +     + D  A+NC I+GL K G +  A +
Sbjct: 498 VPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQ 553

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           ++  +    LVP+ VT+NI+I G C  G  ++A  LF +M      PDV+TF  LI G  
Sbjct: 554 VYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 613

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +  +     ++L  M    V P+    + +V  L K+
Sbjct: 614 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 242/473 (51%), Gaps = 52/473 (10%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING----------------- 175
           +FN  +  L       +A  LF       C PN  TY+TL+                   
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRR 172

Query: 176 -----------------LCRTGHTMIALNLFE-EMANGNGEIGVVCKPNTVTYSTIIDGL 217
                            LCR G T  AL +F  EMA      GV   P  VTY+TII+GL
Sbjct: 173 IRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARD----GVA--PTIVTYNTIINGL 226

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK   +     LF ++ +   +PDVVTYN+LI  LC A D  EA+RL  +M  +   P+V
Sbjct: 227 CKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV 286

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELF 335
           VT++V+++ LCK  ++DEA  L+  M ++   V PN  TYN+ +DG C       A EL 
Sbjct: 287 VTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 346

Query: 336 GSME--SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            S+   S+    D V+++ LI+G CK  +++EA S++ +M++ G  P V+TYN L  GL 
Sbjct: 347 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC 406

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  ++E A  + + M   GV  D  TY+  +D  CK   + EA+EL   +    C  ++ 
Sbjct: 407 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 466

Query: 454 AYNCLIDGLCKSGRLKFAWELF--CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
            +N +IDGLCKS R   A+++F   +L HG LVP+ +TY  +I GL   G+  +A  L  
Sbjct: 467 TFNSIIDGLCKSDRSGEAFQMFDDMALKHG-LVPDKITYCTLIDGLFRTGRAGQAEALLD 525

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            M +    PD   F+  I+G  ++ + S+  ++ ++M E +++PD    +I++
Sbjct: 526 AMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 218/417 (52%), Gaps = 15/417 (3%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G +  + ++N  +N L ++G    A++LF         +   C+PN  TYST++    K 
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRS------RLPPRCRPNHFTYSTLLRATYKA 159

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI-EMMDQGVQPSVVT 279
           G  D  + L    +  + +  V  YN ++  LC A +   A  +F  EM   GV P++VT
Sbjct: 160 GG-DVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVT 218

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N I++ LCK+ ++     L + +V+RG  P+  TYNTL+D  C  G +  A  L G M 
Sbjct: 219 YNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 278

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQ 397
           S  C  + V+Y++LING CK   ++EA  L +EM  K   + P ++TYN+   GL +   
Sbjct: 279 SRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 338

Query: 398 VEHALKLFDEMQRDG---VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              A +L   + RDG   V+ DT T++T IDGLCK G I EA  +F  +       ++  
Sbjct: 339 TAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVIT 397

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L++GLCK+ +++ A  +  S+    + P+V+TY++++   C   ++D+A +L   M 
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK-VMPDASIVSIVVDLLVKN 570
                P+V+TF+ +I G  + +   +  ++   M  K  ++PD      ++D L + 
Sbjct: 458 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT 514



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 210/418 (50%), Gaps = 23/418 (5%)

Query: 181 HTMIALNLFEEMANGNGEIGVVC----------KPNTVTYSTIIDGLCKEGFVDKAKALF 230
           H  +A  +  ++ +GN E+G             K    +++  ++ L K G   KA  LF
Sbjct: 76  HPSVAAAILAQL-DGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLF 134

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
                    P+  TY++L+     A    E    F   +    + SV  +N+++  LC+ 
Sbjct: 135 RSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSR-SVADYNIVLQSLCR- 192

Query: 291 RKMDEASRLLDL----MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
               E +R L++    M + GV P   TYNT+++G C   ++    ELF  +   G   D
Sbjct: 193 --AGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPD 250

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+YN LI+  CK  ++EEA  L+ +M S+   P VVTY+ L  GL ++ +++ A +L  
Sbjct: 251 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQ 310

Query: 407 EMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRTLR--ILKCELDIQAYNCLIDGL 462
           EM R    V  +  TY +F+DGLCK     EA EL R+LR   L+   D   ++ LIDGL
Sbjct: 311 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 370

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G++  A  +F  +  G  VPNV+TYN ++ GLC   +M++A  +   M +    PDV
Sbjct: 371 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 430

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           IT+ +L+  F + +   +  ELLH M  +   P+    + ++D L K++ S ++   F
Sbjct: 431 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMF 488


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/582 (31%), Positives = 284/582 (48%), Gaps = 58/582 (9%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF--- 93
            R G + +   +EA  +FD +L     P  V +FN LL  +++            LF   
Sbjct: 23  ARSGSLGL---DEALKLFDELLHC-ARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRM 78

Query: 94  ---------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
                    PN  TY+ILI CFC++GR+  GF AFG IL++ +  N    + L+KGL   
Sbjct: 79  ARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDA 138

Query: 145 SRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
            R+ EA   L  ++  FGC P+V+ YNT+ING  R G    A NLF EM +         
Sbjct: 139 KRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG------I 192

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PN VTY+T+IDGLCK   VD+AK +F QM D  + PD  TYN LIHG      W E  +
Sbjct: 193 PPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQ 252

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG-- 321
           +  EM   G++P  +T+ +++D LCKN +  EA    D M ++G++P+   Y  L+ G  
Sbjct: 253 MLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYA 312

Query: 322 ------------------------------FCLMGK---INRAEELFGSMESMGCKHDDV 348
                                         FC   K   I  A  +F  M   G   D V
Sbjct: 313 TKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVV 372

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           S+  LI+  CK   V++A+  + +M+++G+ P +  +++L  GL  + + E A +LF E+
Sbjct: 373 SFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV 432

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  D   + T +  LC  G ++EA  L   +  +    ++ +YN L+ G C +GR+
Sbjct: 433 LDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRI 492

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A +L   +    L PN  TY I+++G C   ++D A  LF +M      P V T++ +
Sbjct: 493 DEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTI 552

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +HG  +    S+ NEL   M   +   D    +I+++ L KN
Sbjct: 553 LHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKN 594



 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 170/502 (33%), Positives = 272/502 (54%), Gaps = 11/502 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++  GL P+  TY +L++  CK GR     + F  + R    P+ A +  L+ G   +  
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E  +    +   G  PN   +N +     +      A+++F +M            P+
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG------LSPD 370

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V++  +ID LCK G VD A   F QM +E + P++  ++SL++GLC    W +A+ LF 
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           E++DQG+    V FN +M  LC   ++ EA RL+DLM++ GVRPN  +YNTL+ G CL G
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTG 490

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I+ A +L   M S G K ++ +Y IL+ GYCK + V++A SL+REM+ KG+ P V TYN
Sbjct: 491 RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYN 550

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF+  +   A +L+  M       D  TY   ++GLCKN ++ EA ++FR L   
Sbjct: 551 TILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +LD   +N +I  L K GR + A +LF ++    LVP+VVTY ++ + L  +G + + 
Sbjct: 611 DPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEF 670

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF  ME++  AP+    + L+   +   + S+    L+K+ EK    +AS  S+++ L
Sbjct: 671 DGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISL 730

Query: 567 LVKNEIS--LKSLPS---FLVQ 583
             + E     KSLP    FL++
Sbjct: 731 YSRGEYQPHAKSLPEKYRFLIE 752



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 12/378 (3%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    FNI+  + AK        H   ++   GL P++ ++  LI+  CK+GRV    + 
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++    TPN   F+SL+ GL    +  +A  LF ++   G   + + +NTL+  LC 
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  M A  L + M      I V  +PN ++Y+T++ G C  G +D+A  L   M    +
Sbjct: 454 EGRVMEAQRLIDLM------IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  TY  L+ G C A   ++A  LF EM+ +GV P V T+N I+  L +  +  EA+ 
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M+    + +  TYN +++G C    ++ A ++F  + S   + D V++NI+I    
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K    E+A+ L+  + + G+ P VVTY  +   L E   +     LF  M++ G A ++ 
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687

Query: 419 TYTTFIDGLCKNGYIIEA 436
                +  L   G I  A
Sbjct: 688 MLNALVRRLLHRGDISRA 705



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 161/336 (47%), Gaps = 7/336 (2%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG------VRPNA 312
           +EA +LF E++      SV  FN ++  + +      + R++ L  +        V PNA
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-LYR 371
           CTY+ L+  FC MG++      FG +   G + + +  + L+ G C  K V+EA   L  
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            M   G  P VV YNT+  G F   QVE A  LF EM   G+  +  TYTT IDGLCK  
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            +  A  +F+ +     + D   YNCLI G   +G+ K   ++   +    L P+ +TY 
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           +++  LC +G+  +AR  F  M      PDV  + +L+HG+      S+++  L  M   
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330

Query: 552 KVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            V P+  I +I+     K  +  +++  F    +QG
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 7/182 (3%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG--YIIEAVELFRTLRILKCELDIQ-- 453
           ++ ALKLFDE+      A  R +   +  + + G     E V    T    +C   +   
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 454 --AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD-LF 510
              Y+ LI   C+ GRL+  +  F  +       NV+  + +++GLC+  ++D+A D L 
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           L M E    PDV+ ++ +I+GF R  +  K   L  +M ++ + P+    + V+D L K 
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 571 EI 572
           ++
Sbjct: 210 QV 211


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 182/531 (34%), Positives = 279/531 (52%), Gaps = 22/531 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
            +A  +FD M R H   P   ++N LL+ L              R+   G  P++ TYN 
Sbjct: 67  GDAQTVFDGM-RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNT 125

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ FCK+G++      F   ++  F P+  T+N+LI G     ++ EA  +  ++ +  
Sbjct: 126 LLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE- 220
             P+V+TYN+L+NGLC+ G    A  L  +             PN +TYST+I GLC+E 
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG---------FSPNVITYSTLISGLCREL 236

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             ++ A+ L  +M      PD+V+YN+LIHGL      +EA +LF  ++ QG +P V T+
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTY 296

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N+++D L K  +++EA  L   +V+ G+ P+A TY   +DG C  G++  A  +   M+ 
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC  D VS+N +ING CK K V+EA  L   M +KG  P  +++NTL  G     + + 
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCK---NGYIIEAVELFRTLRILKCEL-DIQAYN 456
           A+  F EM + GV     TY   +DGLCK    G I EA+ LF  + I K  + D+  Y+
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM-IEKGRVPDVVTYS 475

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LIDGL K+G+L  A  L  ++     +PNV TYN +I GLC   ++D+A +LF+ M E 
Sbjct: 476 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK 535

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
              PD IT+  +I    +     K   L     E  V+P + +   ++D L
Sbjct: 536 GCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586



 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 186/573 (32%), Positives = 298/573 (52%), Gaps = 57/573 (9%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           ++D ++R++   P   +  ILL SL K+   +       +L   GL  ++ T+NI I+  
Sbjct: 4   VYDKLVRIYS--PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGL 60

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+  R+      F  + +  F PN  T+N+L+ GL    R+ +A AL+ ++   G  P+V
Sbjct: 61  CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TYNTL++G C+ G    AL +F    +G  + G V  P+ VTY+ +I+G CK   +D+A
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIF----DGAVKRGFV--PDVVTYNALINGFCKADKLDEA 174

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + +  +M  E++ PDVVTYNSL++GLC     +EA+ L +   D+G  P+V+T++ ++  
Sbjct: 175 QRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISG 231

Query: 287 LCKN-RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
           LC+  R+++ A +LL+ MV  G +P+  +YN L+ G      ++ A +LFGS+   G + 
Sbjct: 232 LCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEP 291

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +  +YNILI+G  K   V EA  L+  +V  G++P  +TY     GL +  +VE AL + 
Sbjct: 292 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 351

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL---------------FRTLRILKCEL 450
            +M   G   D  ++   I+GLCK   + EA  L               F TL   +C  
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411

Query: 451 D--------------------IQAYNCLIDGLCKS---GRLKFAWELFCSLPHGVLVPNV 487
                                +  YN L+DGLCK+   GR+K A  LF ++     VP+V
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 471

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTY+ +I GL   G++D AR L   ME     P+V T++ LI G   +++  +  EL   
Sbjct: 472 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVA 531

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           M EK  +PD      ++  L K E+  K+L  F
Sbjct: 532 MVEKGCVPDTITYGTIISALCKQEMVDKALALF 564



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 169/474 (35%), Positives = 249/474 (52%), Gaps = 22/474 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  IFD  ++     P V ++N L+    K    D       R+ +  L P++ TYN 
Sbjct: 137 DEALKIFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAF 160
           L+N  CK GRV    +    I+   F+PN  T+++LI GL  E R +E+A  L  K+   
Sbjct: 196 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           GC+P++++YN LI+GL R      AL LF  +     E      P   TY+ +IDGL KE
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE------PEVPTYNILIDGLLKE 306

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             V++A  LF  +    + PD +TY   I GLC A    +A  +  +M ++G  P VV+ 
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N +++ LCK +++DEA  LL  M  +G  PNA ++NTL+ G C  GK  +A   F  M  
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426

Query: 341 MGCKHDDVSYNILINGYCKNKE---VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            G K   V+YNIL++G CK ++   ++EA++L+  M+ KG  P VVTY+ L  GL +  +
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A +L   M+  G   +  TY + I GLC    + EA+ELF  +    C  D   Y  
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546

Query: 458 LIDGLCKSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +I  LCK   +  A  LF  SL  GV VP    Y  +I GLC   ++D+A  L 
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGV-VPTSGMYFSLIDGLCAVARVDEALKLL 599



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/387 (36%), Positives = 218/387 (56%), Gaps = 16/387 (4%)

Query: 65  PPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V +++ L++ L +        +    ++   G  P++ +YN LI+   +   VS    
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK 279

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            FG +LR  + P   T+N LI GL  E R+ EA  LF+ L   G EP+ ITY   I+GLC
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    AL + ++M          C P+ V+++ +I+GLCKE  VD+A+ L   M+ + 
Sbjct: 340 KAGRVEDALLMLKDMDEKG------CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR---KMD 294
            +P+ +++N+LI G C A  W +A   F EM+ +GV+P+VVT+N+++D LCK R   ++ 
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L D M+++G  P+  TY+ L+DG    GK++ A  L G+ME+ GC  +  +YN LI
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G C   +V+EAL L+  MV KG  P  +TY T+   L +   V+ AL LFD     GV 
Sbjct: 514 SGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVV 573

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFR 441
             +  Y + IDGLC    + EA++L +
Sbjct: 574 PTSGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 181/506 (35%), Positives = 270/506 (53%), Gaps = 45/506 (8%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCI--FDYMLRMHPSPPPVSSFNILLASLAKNK 81
           NF +L   F+ + T    I +I  +E   +  F+ +L      PP+  F  +L SL K  
Sbjct: 16  NFQTLNSSFQQIYTLNY-ITIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKIN 74

Query: 82  HYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFN 135
            Y T      ++   G+  NL T NILINCF ++G+  L F  F  IL+  + PN  T  
Sbjct: 75  CYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLT 134

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           +LIKGL  +                      ++Y TLINGLC+ G    AL L   +   
Sbjct: 135 TLIKGLCLK----------------------VSYGTLINGLCKVGQARAALQLLRRVD-- 170

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
               G + +PN V Y+TIID +CK   V++A  L+ +M  E I+PDVVTY++LI G    
Sbjct: 171 ----GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIV 226

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
               +A  LF +M+ + ++P V TFN+++D  CK+ KM E   +  +M+++G++PN  TY
Sbjct: 227 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 286

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
            +LMDG+CL+ ++N+A  +F +M   G   D  SYNI+ING+CK K+V+EA++L+++M  
Sbjct: 287 CSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHC 346

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           K I P VVTY +L  GL +  ++ +ALKL DEM   GV  D  TY++ +D LCKN  + +
Sbjct: 347 KNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 406

Query: 436 AVEL--------FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           A+ L        F  L +    LD+ AY  +I G C  G    A  L   +     +P+ 
Sbjct: 407 AIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDA 466

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDM 513
            TY I+I  L    + D A  L  +M
Sbjct: 467 KTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 238/463 (51%), Gaps = 37/463 (7%)

Query: 118 AFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +F R+L +   TP    F  ++  L   +    A +L  +++  G   N++T N LIN  
Sbjct: 46  SFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCF 105

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G   ++ ++F  +     +      PN +T +T+I GLC +                
Sbjct: 106 SQLGQNPLSFSVFANILKKGYD------PNVITLTTLIKGLCLK---------------- 143

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
                 V+Y +LI+GLC       A +L   +  + VQP+VV +N I+D +CK + ++EA
Sbjct: 144 ------VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 197

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   MV  G+ P+  TY+ L+ GF ++GK+  A +LF  M     K D  ++NIL++G
Sbjct: 198 FDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 257

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +CK+ +++E  +++  M+ +GIKP VVTY +L  G   + QV  A  +F+ M + GV  D
Sbjct: 258 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPD 317

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           T++Y   I+G CK   + EA+ LF+ +       ++  Y  LIDGLCKSG++ +A +L  
Sbjct: 318 TQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVD 377

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL--------FLDMEENAAAPDVITFDML 528
            +    + P+++TY+ ++  LC + Q+DKA  L        F D+       DV  + ++
Sbjct: 378 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVM 437

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           I GF      ++   LL KM++   +PDA    I++  L K +
Sbjct: 438 IQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKD 480



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 179/329 (54%), Gaps = 22/329 (6%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N ++ S+ K    N+ +D  + + + G+ P++ TY+ LI+ F  +G++      
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     P+  TFN L+ G   + ++ E   +F  +   G +PNV+TY +L++G C 
Sbjct: 236 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 295

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  MA G    GV   P+T +Y+ +I+G CK   VD+A  LF +M  +NI
Sbjct: 296 VKQVNKANSIFNTMAQG----GV--NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTY SLI GLC +   + A +L  EM D+GV P ++T++ I+D LCKN ++D+A  
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 409

Query: 299 LL---------DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           LL         DL V +G   +   Y  ++ GFC+ G  N A  L   ME  G   D  +
Sbjct: 410 LLTKLKDQVFEDLFV-KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGI 378
           Y I+I    K  E + A  L REM+++G+
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 140/274 (51%), Gaps = 21/274 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNIL 102
           +A  +F+ M+ +    P V +FNIL+    K+      K     +   G+ PN+ TY  L
Sbjct: 231 DAIDLFNKMI-LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 289

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ +C + +V+     F  + +    P+  ++N +I G     ++ EA  LF K+     
Sbjct: 290 MDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PNV+TY +LI+GLC++G    AL L +EM +     GV   P+ +TYS+I+D LCK   
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDR----GV--PPDIITYSSILDALCKNHQ 403

Query: 223 VDKAKALFLQMKDE--------NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           VDKA AL  ++KD+          N DV  Y  +I G C    +NEA  L  +M D G  
Sbjct: 404 VDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRI 463

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           P   T+ +I+  L K  + D A +LL  M+ RG+
Sbjct: 464 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 15/303 (4%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            + T N I   + KN + +  S    L+ Q+   P    +  ++     +   + A  L 
Sbjct: 26  QIYTLNYI--TIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLH 83

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT----------- 384
             ME  G   + V+ NILIN + +  +   + S++  ++ KG  P V+T           
Sbjct: 84  RQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK 143

Query: 385 --YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
             Y TL  GL ++ Q   AL+L   +    V  +   Y T ID +CK   + EA +L+  
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       D+  Y+ LI G    G+LK A +LF  +    + P+V T+NI++ G C DG+
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           M + + +F  M +    P+V+T+  L+ G+  + + +K N + + M +  V PD    +I
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323

Query: 563 VVD 565
           +++
Sbjct: 324 MIN 326



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 22/222 (9%)

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+SL+R+M  KGI   +VT N L     ++ Q   +  +F  + + G   +  T TT I 
Sbjct: 79  AISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIK 138

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC              L++        +Y  LI+GLCK G+ + A +L   +   ++ P
Sbjct: 139 GLC--------------LKV--------SYGTLINGLCKVGQARAALQLLRRVDGKLVQP 176

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NVV YN +I  +C    +++A DL+ +M     +PDV+T+  LI GF  + +     +L 
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +KM  + + PD    +I+VD   K+    +    F +  +QG
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 278


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 172/494 (34%), Positives = 273/494 (55%), Gaps = 54/494 (10%)

Query: 33  RDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------R 86
           R  +T+   +N+    + FC    M++  P P  V  F+ +L+ +AK+K+YD        
Sbjct: 39  RTFSTKRSSMNLEEEIDLFC---KMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHH 94

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  +LY+YNI+INC C+                                    SR
Sbjct: 95  MEVCGIGHDLYSYNIVINCLCRC-----------------------------------SR 119

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            + A ++  K+  FG EP+V+T ++LING C+      A++L  +M     E+G   +P+
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME----EMGF--RPD 173

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+TIIDG CK G V+ A  LF +M+ + +  D VTYNSL+ GLC +  W++A RL  
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ + + P+V+TF  ++D   K  K  EA +L + M +R V P+  TYN+L++G C+ G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A+++   M + GC  D V+YN LING+CK+K V+E   L+REM  +G+    +TYN
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  G F+  + + A ++F  M       + RTY+  + GLC N  + +A+ LF  ++  
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           + ELDI  YN +I G+CK G ++ AW+LF SL    L P+VV+Y  MI G C   Q DK+
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470

Query: 507 RDLFLDMEENAAAP 520
             L+  M+E+   P
Sbjct: 471 DLLYRKMQEDGLLP 484



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 230/437 (52%), Gaps = 9/437 (2%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++++S   P+   F+ ++  +          +LF  ++  G   ++ +YN +IN LCR
Sbjct: 57  FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               +IAL++  +M     E      P+ VT S++I+G C+   V  A  L  +M++   
Sbjct: 117 CSRFVIALSVVGKMMKFGYE------PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVV YN++I G C     N+A  LF  M   GV+   VT+N ++  LC + +  +A+R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+  MV R + PN  T+  ++D F   GK + A +L+  M       D  +YN LING C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            +  V+EA  +   MV+KG  P VVTYNTL  G  +  +V+   KLF EM + G+  DT 
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I G  + G    A E+F  +       +I+ Y+ L+ GLC + R++ A  LF ++
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  ++ TYNI+I G+C  G ++ A DLF  +      PDV+++  +I GF R  + 
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467

Query: 539 SKVNELLHKMKEKKVMP 555
            K + L  KM+E  ++P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 201/379 (53%), Gaps = 10/379 (2%)

Query: 198 EIGVVCK-------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
           EI + CK       P+ V +S ++  + K    D   +LF  M+   I  D+ +YN +I+
Sbjct: 53  EIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN 112

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            LC  + +  A  +  +MM  G +P VVT + +++  C+  ++ +A  L+  M + G RP
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +   YNT++DG C +G +N A ELF  ME  G + D V+YN L+ G C +    +A  L 
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           R+MV + I P V+T+  +     +  +   A+KL++EM R  V  D  TY + I+GLC +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G + EA ++   +    C  D+  YN LI+G CKS R+    +LF  +    LV + +TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +IQG    G+ D A+++F  M+   + P++ T+ +L++G        K   L   M++
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409

Query: 551 KKVMPDASIVSIVVDLLVK 569
            ++  D +  +IV+  + K
Sbjct: 410 SEIELDITTYNIVIHGMCK 428



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 212/410 (51%), Gaps = 11/410 (2%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
           E   LF K+      P+++ ++ +++ + ++ +  + ++LF  M   G G        + 
Sbjct: 52  EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGH-------DL 104

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +Y+ +I+ LC+      A ++  +M      PDVVT +SLI+G C  N   +A  L  +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M + G +P VV +N I+D  CK   +++A  L D M + GVR +A TYN+L+ G C  G+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + A  L   M       + +++  +I+ + K  +  EA+ LY EM  + + P V TYN+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL    +V+ A ++ D M   G   D  TY T I+G CK+  + E  +LFR +    
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D   YN +I G  ++GR   A E+F  +      PN+ TY+I++ GLC + +++KA 
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 401

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            LF +M+++    D+ T++++IHG  +I       +L   +  K + PD 
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 35/300 (11%)

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           ++E   L   M+Q    P+   ++ ++         +    LF  ME  G  HD  SYNI
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 353 -----------------------------------LINGYCKNKEVEEALSLYREMVSKG 377
                                              LING+C+   V +A+ L  +M   G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
            +P VV YNT+  G  +I  V  A++LFD M+RDGV AD  TY + + GLC +G   +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            L R + +     ++  +  +ID   K G+   A +L+  +    + P+V TYN +I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G++D+A+ +   M      PDV+T++ LI+GF +     +  +L  +M ++ ++ D 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/522 (32%), Positives = 290/522 (55%), Gaps = 14/522 (2%)

Query: 65  PPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++NI+      L  L +      +++ +GL P++ TY++LI  +CKIGR +     
Sbjct: 268 PDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R    PN+  ++ L+ G   +  +++   L   +   G       +N LI    +
Sbjct: 328 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 387

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+  F EM   NG      +P+ V+YST+I  LCK G V+ A   F QM  E +
Sbjct: 388 HGAVDKAMTAFTEMRQ-NG-----LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P+++++ SLIHGLC   +W + + L  EM+++G+ P  +  N IMD LCK  ++ EA  
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD 501

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D+++  GV+P+  +YNTL+DG+C +GK++ + +    M S+G + D  +YN L+NGY 
Sbjct: 502 FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYF 561

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           KN  VE+AL+LYREM  K +K   +T N +  GLF+  ++  A +L+ +M   G      
Sbjct: 562 KNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIE 621

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + GLC+N  + EA+ +F  LR  + ELD++ ++ +I+ L K GR+  A  LF ++
Sbjct: 622 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAM 681

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                VP+V+TY++MI+    +G ++++ +LFL ME+N  A D    ++++   +   + 
Sbjct: 682 VLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDV 741

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLV--KNEISLKSLP 578
            +    L K+ EK    +AS  ++++ ++   K +  +K LP
Sbjct: 742 RRAGTYLTKIDEKNFSLEASTAALLIPIVSEKKYQKEVKFLP 783



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 171/537 (31%), Positives = 275/537 (51%), Gaps = 20/537 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYT---------- 98
           +A  +FD +L     P  V +FN +L  +A+     +  ++  L  +L+           
Sbjct: 32  DALNLFDELLP-QARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 99  ---YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-F 154
                ILI CFC +GR+ L F AF   L++ +     T N LIKGL   +R  +A  + F
Sbjct: 91  AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTI 213
            ++   G  P+V +YN LI GLC    +  AL L   M A+G    G  C PN V+Y+T+
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADG----GYNCSPNVVSYNTV 206

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDG  KEG VDKA  LF +M  + + PDVVTYNSLI GLC A   ++A  +   M D+GV
Sbjct: 207 IDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P   T+N+++   C   +++EA RLL  M   G++P+  TY+ L+  +C +G+   A  
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARS 326

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +F SM   G K +   Y+IL++GY     + +   L   M+  GI      +N L     
Sbjct: 327 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 386

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   V+ A+  F EM+++G+  D  +Y+T I  LCK G + +AV  F  +       +I 
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           ++  LI GLC  G  K   EL   + +  + P+ +  N ++  LC +G++ +A+D F  +
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                 PDV++++ LI G+  + +  +  + L +M    + PD+   + +++   KN
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 276/587 (47%), Gaps = 53/587 (9%)

Query: 55  DYMLRMHPS---PPPVSSFNILLASLAKNKHYDTRL------NATGLF---PNLYTYNIL 102
           D + R  P     P V S+N L+  L   K     L       A G +   PN+ +YN +
Sbjct: 147 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTV 206

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ F K G V   +  F  ++     P+  T+NSLI GL     + +A A+   +   G 
Sbjct: 207 IDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  TYN +I G C  G    A+ L ++M+ G+G      +P+ VTYS +I   CK G 
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS-GSG-----LQPDVVTYSLLIQYYCKIGR 320

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHG------LCHANDW------------------ 258
             +A+++F  M  +   P+   Y+ L+HG      L    D                   
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380

Query: 259 -----------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
                      ++A   F EM   G++P VV+++ ++  LCK  ++++A    + MV  G
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + PN  ++ +L+ G C +G+  + EEL   M + G   D +  N +++  CK   V EA 
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
             +  ++  G+KP VV+YNTL  G   + +++ ++K  D M   G+  D+ TY + ++G 
Sbjct: 501 DFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGY 560

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            KNG + +A+ L+R +     +      N ++ GL ++GR+  A EL+  +        +
Sbjct: 561 FKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRI 620

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            TYN ++ GLC +  +D+A  +F D+       DV TF ++I+  +++    +   L   
Sbjct: 621 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSA 680

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           M  +  +PD    S+++   ++  +  +S   FL  E+ G   +S++
Sbjct: 681 MVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHM 727



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 156/331 (47%), Gaps = 4/331 (1%)

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  LF  M+  GV        +++   C   ++D A     L ++ G R    T N L+ 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 321 GFCLMGKINRAEEL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-- 377
           G C   + + A ++ F  M  +G   D  SYN LI G C  K+ +EAL L   M + G  
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 378 -IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
              P VV+YNT+  G F+  +V+ A  LF EM   G+  D  TY + IDGLCK   + +A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           V + + +       D + YN +I G C  G+L+ A  L   +    L P+VVTY+++IQ 
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C  G+  +AR +F  M      P+   + +L+HG+        V +LL  M    +  +
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               +I++    K+    K++ +F    + G
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 174/518 (33%), Positives = 273/518 (52%), Gaps = 18/518 (3%)

Query: 67  VSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           V+ +NI+L SL +          +   +   G+ P + TYN +IN  CK   +  G   F
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             ++     P+  T+N+LI  L     + EA  L   + + GC PNV+TY+ LINGLC+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-- 237
           G    A  L +EM   + ++     PN +TY++ +DGLCK+    +A  L   ++D +  
Sbjct: 121 GRIDEARELIQEMTRKSCDV----LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 176

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++PD VT+++LI GLC     +EA  +F +M+  G  P+V+T+N +++ LCK  KM+ A 
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH-----DDVSYNI 352
            +++ MV +GV P+  TY+ L+D FC   +++ A EL   M S GC       D V++NI
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI G CK    E+A +L+ EMV+K ++P V+T+  L  GL +  QVE A  + D M   G
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  +  TY   + GLCK+G I EA +    +    C  D   Y  L+  LC++ R   A 
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +L   L      P+ VTYNI++ GL   G+ ++A  +  +M      PD  TF     G 
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            R    +   ELL  +  K ++PDA+  S ++D + ++
Sbjct: 477 HRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRS 514



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 147/456 (32%), Positives = 229/456 (50%), Gaps = 60/456 (13%)

Query: 65  PPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P V ++N L+ SL        A+  H D  +++ G  PN+ TY++LIN  CK+GR+    
Sbjct: 70  PDVVTYNTLIDSLCKAGDLEEARRLHGD--MSSRGCVPNVVTYSVLINGLCKVGRIDEAR 127

Query: 117 IAFGRILR-SC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLK--AFGCEPNVITYNTL 172
                + R SC   PN  T+NS + GL  +S   EA  L   L+  +    P+ +T++TL
Sbjct: 128 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL 187

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+GLC+ G    A ++F++M  G    G V  PN +TY+ +++GLCK   +++A A+   
Sbjct: 188 IDGLCKCGQIDEACSVFDDMIAG----GYV--PNVITYNALVNGLCKADKMERAHAMIES 241

Query: 233 MKDENINPDVVTY----------------------------------------NSLIHGL 252
           M D+ + PDV+TY                                        N LI G 
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C A ++ +A  LF EM+ + +QP V+TF  ++D LCK  +++ A  +LDLM   GV PN 
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN L+ G C  G+I  A +    M S GC  D ++Y  L+   C+    ++AL L  E
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           + S G  P  VTYN L  GL++  + E A+ + +EM   G   D+ T+     GL ++G 
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +   +EL R +       D    + ++D +C+SG+L
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKL 517


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 199/609 (32%), Positives = 304/609 (49%), Gaps = 99/609 (16%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNI 101
           N+A  +F  +LR +P+PP +  F  +L SL K+KHY T L+ +      G+  N    NI
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIE-FGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNI 150

Query: 102 LINCFCKIGRVSLGFIAFGR------ILRSCF-TPNAATF-------------------- 134
           LIN FC++G +   F    R      IL+ CF   N   F                    
Sbjct: 151 LINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKD 210

Query: 135 ---NSLIKGLHAESRIMEAAALFTK----LKAF--------------GCEPNVIT----- 168
              + L   LH+   ++E    F K    LK+F              G EP+ IT     
Sbjct: 211 FLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFI 270

Query: 169 ------------------------------YNTLINGLCRTGHTMIALNLFEEMANGNGE 198
                                         Y TLINGLC+ G T  AL L          
Sbjct: 271 KGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRR------N 324

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
            G + +P+ V Y+TIIDG+CK+  V+ A  L+ +   + I PDV TYN+LI G C     
Sbjct: 325 DGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKL 384

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
            +A  LF +M  + + P V TF++++D  CK+  + EA  +L +M+++ ++P+  TY++L
Sbjct: 385 KDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSL 444

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           MDG+CL+ ++N+AE +F +M   G   +  SYNI+ING+CK K V+EA+ L++EM  K I
Sbjct: 445 MDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI 504

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P V+TY++L  GL +  ++ +AL+L DEM   G   D  TY + +D LCK  ++ +A+ 
Sbjct: 505 FPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAIT 564

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   L+      D+  Y  L+ GLC+SG+L+ A ++F  L       +V  Y +MIQG C
Sbjct: 565 LLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFC 624

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV---MP 555
           + G  D+A  L   MEEN   PD  T++++I      +E     +LL +M  + +   + 
Sbjct: 625 DKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALT 684

Query: 556 DASIVSIVV 564
           D  + SI+V
Sbjct: 685 DDLVASILV 693



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 216/483 (44%), Gaps = 21/483 (4%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+LR   TP    F  ++  L          +L  K++  G + N +  N LIN  C+
Sbjct: 98  FYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQ 157

Query: 179 TGHTMIALNLFEEMANGNGEIGVV--C--KPN-----TVTYSTIIDGLCKEGFVDKAKAL 229
            G    A   F  +  G   I ++  C  + N      + +  +I    K  F+      
Sbjct: 158 LGLIPFA---FSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKD---- 210

Query: 230 FLQMKDENINPD----VVTYNSLIHGLCHANDWN-EAKRLFIEMMDQGVQPSVVTFNVIM 284
           FLQ +  N+       +  + + I   C    +    +    +++  G +P  +T    +
Sbjct: 211 FLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFI 270

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              C   ++ +A    D ++  G   +  +Y TL++G C +G+   A EL    +    +
Sbjct: 271 KGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQ 330

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D V YN +I+G CK+K V +A  LY E VSK I P V TYN L  G   + +++ A+ L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F++M    +  D  T++  +DG CK+G I EA  +   +     + D+  Y+ L+DG C 
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
              +  A  +F ++ H  +  NV +YNIMI G C    +D+A  LF +M      PDVIT
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
           +  LI G  +    S   EL+ +M  +   PD    + ++D L K     K++      +
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 585 RQG 587
            QG
Sbjct: 571 GQG 573


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 176/453 (38%), Positives = 253/453 (55%), Gaps = 52/453 (11%)

Query: 107 CKIGRVSL--GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           CK G + +   F  F  ++RS   P  ++FN L+ GL   +   +  +L+ K++  G  P
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSP 123

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           ++ T N L N LC        L                           + G+ + G++ 
Sbjct: 124 DLFTLNILANCLCNLNRVSEGL-------------------------AAMTGILRRGYI- 157

Query: 225 KAKALFLQMKDENINPDVVTYNSLI---HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
                          PD+VTYN+LI   +GLC     +EAK +F EM  QG+ P+V++++
Sbjct: 158 ---------------PDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYS 202

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI---NRAEELFGSM 338
            ++   C   K++E+ RL + MV +GV+PN   +N L+D  C  GKI   + A +LF SM
Sbjct: 203 SLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSM 262

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S GC+H+++SY ILINGYCK  +VEEA++LY EM   G +P V TY+TL  GL +  +V
Sbjct: 263 PSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKV 322

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A KLF  M+  G++ D+  Y  F+DGLCKNG + EA+ELF  L+    +LD ++Y+ L
Sbjct: 323 GDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRL 382

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF---LDMEE 515
           IDGLCK+G+++ AWE F  L    L PNVVT NIMI G C   Q+DKA  LF     MEE
Sbjct: 383 IDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEE 442

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           N   PD+IT++ L+ GF   N+  +V  LLHKM
Sbjct: 443 NGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/439 (36%), Positives = 244/439 (55%), Gaps = 30/439 (6%)

Query: 20  AFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
           +F+   SS L   R+  T  G+I+VI   +AF  FD M+R HP PP +SSFN LL  LAK
Sbjct: 52  SFQHRLSSFL---RNCKT--GNIDVI---QAFHFFDLMMRSHPIPP-ISSFNRLLGGLAK 102

Query: 80  NKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
             HY        ++   GL P+L+T NIL NC C + RVS G  A   ILR  + P+  T
Sbjct: 103 INHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVT 162

Query: 134 FNSLIKGLHAESRIM---EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
           +N+LIKGL+   ++    EA  +F ++KA G  PNVI+Y++L++G C  G    +  LF 
Sbjct: 163 YNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFN 222

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV---DKAKALFLQMKDENINPDVVTYNS 247
           EM +     GV  +PN V ++ +ID LCKEG +     A+ LFL M  +    + ++Y  
Sbjct: 223 EMVDQ----GV--QPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTI 276

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI+G C      EA  L+ EM   G +P+V T++ ++  L +  K+ +A++L  +M   G
Sbjct: 277 LINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASG 336

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +  ++C Y   +DG C  G +  A ELF  ++S   K D  SY+ LI+G CK  +VE A 
Sbjct: 337 ISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAW 396

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR---DGVAADTRTYTTFI 424
             ++++  +G++P VVT N +  G   + QV+ A  LF++M++   +G   D  TY T +
Sbjct: 397 EFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLL 456

Query: 425 DGLCKNGYIIEAVELFRTL 443
            G C++  + E V L   +
Sbjct: 457 RGFCESNKLEEVVNLLHKM 475



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 189/386 (48%), Gaps = 48/386 (12%)

Query: 218 CKEGFVDKAKALF---LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           CK G +D  +A     L M+   I P + ++N L+ GL   N +++   L+ +M   G+ 
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPI-PPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLS 122

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF---CLMGKINRA 331
           P + T N++ + LC   ++ E    +  +++RG  P+  TYNTL+ G    C +G  + A
Sbjct: 123 PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEA 182

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +E+F  M++ G   + +SY+ L++G+C   ++EE+  L+ EMV +G++P +V +N L   
Sbjct: 183 KEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDI 242

Query: 392 LFE---IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK------------------- 429
           L +   I  +  A KLF  M   G   +  +YT  I+G CK                   
Sbjct: 243 LCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGK 302

Query: 430 ----------------NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
                            G + +A +LF  ++     +D   Y   +DGLCK+G L  A E
Sbjct: 303 RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAME 362

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  L       +  +Y+ +I GLC  G+++ A + F  + +    P+V+T +++IHGF 
Sbjct: 363 LFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFC 422

Query: 534 RINEPSKVN---ELLHKMKEKKVMPD 556
           R+ +  K N   E + KM+E    PD
Sbjct: 423 RVEQVDKANILFEKMEKMEENGCTPD 448


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 185/566 (32%), Positives = 293/566 (51%), Gaps = 43/566 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F  M++    PP   +++ ++ +L K +  D       ++   G
Sbjct: 231 KEGDVN-----KACDLFKEMVQ-RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN +TYN LI  +   G+       F  + R    P+  TFN L+  L    +I EA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC-------- 203
            +F  +   G  P+V +YN ++NG    G  +   +LF+ M  G+G   V+C        
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKA 403

Query: 204 ----------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                                 KPN +TY+T+I  LC+ G +D A   F QM D+ + PD
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              Y+ LI G C      +AK L  E+M+ G+   +V F+ I++ LCK  ++ +A  + D
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFD 523

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           L V  G+ P A  Y+ LMDG+CL+GK+ +A  +F +M S G + +DV Y  L+NGYCK  
Sbjct: 524 LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIG 583

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++E LSL+REM+ KGIKP+ + YN +  GLFE  +   A   F EM   G+A +  TY+
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 643

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GL KN    EA+ LF+ LR +  ++DI   N +I G+ ++ R++ A +LF S+   
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            LVP VVTY+IMI  L  +G +++A D+F  M+     PD    + ++   ++ NE  + 
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLL 567
              L K+ E+    +     ++VDL 
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLF 789



 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 177/585 (30%), Positives = 277/585 (47%), Gaps = 62/585 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----------------- 79
            REG    + P EA  + D + R   +P      N  LA++A+                 
Sbjct: 38  VREG---TLRPEEAHDLLDELQR-RGTPVLERDLNGFLAAIARAPSSAACRSGPALAVAL 93

Query: 80  -NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            N+          L P  +TY IL++C  +  R  L    FG++LR+    +    N L+
Sbjct: 94  FNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLL 153

Query: 139 KGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           KG     R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L   MA G  
Sbjct: 154 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-- 211

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-- 255
             G VC P+ V Y+T+IDG  KEG V+KA  LF +M    I PD VTY+S++H LC A  
Sbjct: 212 --GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269

Query: 256 ---------------------------------NDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                                              W EA R+F EM  Q + P VVTFN+
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNM 329

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  K+ EA  + D M  +G  P+  +YN +++G+   G +    +LF  M   G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
                 ++N+LI  Y     +++A+ ++ EM   G+KP V+TY T+   L  I +++ A+
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM 449

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + F++M   GVA D   Y   I G C +G +++A EL   +      LDI  ++ +I+ L
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F    +  L P  V Y++++ G C  G+M+KA  +F  M      P+ 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           + +  L++G+ +I    +   L  +M +K + P   + +I++D L
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 262/526 (49%), Gaps = 17/526 (3%)

Query: 55  DYMLRMHPS-----PPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           D +LRM         P V ++N ++    K    NK  D    +   G+ P+  TY+ ++
Sbjct: 202 DDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   +        +++     PN  T+N+LI G  +  +  EA  +F +++     
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 321

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+T+N L+  LC+ G    A ++F+ MA   G+      P+  +Y+ +++G   +G +
Sbjct: 322 PDVVTFNMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSYNIMLNGYATKGCL 375

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
                LF  M  + I P + T+N LI    +    ++A  +F EM D GV+P+V+T+  +
Sbjct: 376 VDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTV 435

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+  KMD+A    + M+ +GV P+   Y+ L+ GFC  G + +A+EL   + + G 
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V ++ +IN  CK   V +A +++   V+ G+ PT V Y+ L  G   + ++E AL+
Sbjct: 496 HLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FD M   G+  +   Y T ++G CK G I E + LFR +     +     YN +IDGL 
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++GR   A   F  +    +  N  TY+I+++GL  +   D+A  LF ++       D+I
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 675

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T + +I G  +     +  +L   +    ++P     SI++  L+K
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 169/338 (50%), Gaps = 9/338 (2%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P   TY  L+     A+    A   F +++  G++  ++  N ++   C+ ++ DEA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA- 165

Query: 298 RLLDLMVQR----GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYN 351
             LD+++ R    G  P+  +Y+ L+   C  GK  +A++L   M   G  C  D V+YN
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYN 223

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I+G+ K  +V +A  L++EMV +GI P  VTY+++   L +   ++ A     +M   
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  +  TY   I G    G   EAV +F+ +R      D+  +N L+  LCK G++K A
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++F ++      P+V +YNIM+ G    G +    DLF  M  +  AP + TF++LI  
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 403

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +       K   + ++M++  V P+    + V+  L +
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 181/399 (45%), Gaps = 13/399 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  IF+ M R H   P V ++  ++A+L +    D  +         G+ P+ Y Y+ 
Sbjct: 411 DKAMIIFNEM-RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  FC  G +         I+ +    +   F+S+I  L    R+M+A  +F      G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P  + Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNDVVYGTLVNGYCKIG 583

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+  +LF +M  + I P  + YN +I GL  A     AK  F EM + G+  +  T++
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 643

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  L KNR  DEA  L   +    V+ +  T NT++ G     ++  A++LF S+   
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G     V+Y+I+I    K   VEEA  ++  M + G +P     N +   L + +++  A
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
                ++     + +  T    +D     G   E +   
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 184/563 (32%), Positives = 303/563 (53%), Gaps = 45/563 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD      ++A+  +  ML    SP  V+ ++ ++A+L K +  D      T +   G
Sbjct: 208 KEGD-----SDKAYSTYHEMLDRRISPDVVT-YSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 92  LFPNLYTYNILINCFC--KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  +  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLK--KMRSDGVEPDVVTYNSLMDYLCKNGRSTE 319

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTG-----HTMIALNL---------------- 188
           A  +F  +   G EP++ TY TL+ G    G     H ++ L +                
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 189 -FEEMANGNGEIGVVCK-------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            + +    +  + V  K       PN VTY  +I  LCK G VD A   F QM DE + P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++ Y SLIH LC  + W++A+ L +EM+D+G+  + + FN I+   CK  ++ E+ +L 
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLMV+ GV+PN  TY+TL+DG+CL GK++ A +L  SM S+G K D V+YN LINGYC+ 
Sbjct: 500 DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRV 559

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +++AL+L++EMVS G+ P ++TYN +  GLF   +   A +L+  + + G   +  TY
Sbjct: 560 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + GLCKN    EA+ +F+ L +   +L+ + +N +I  L K GR   A +LF +L  
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 679

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+V TY++M + L   G +++  DLFL MEEN    +    + ++   ++  + ++
Sbjct: 680 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 739

Query: 541 VNELLHKMKEKKVMPDASIVSIV 563
               L  + EK    +AS  S++
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLL 762



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 179/611 (29%), Positives = 290/611 (47%), Gaps = 83/611 (13%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +F+ +LR       +   N  LA +A++        Y+   R  A  + P ++TY 
Sbjct: 33  DARHVFEELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI C C+ GR+ LGF A G +++  F   A TF  L+KGL A+ R  +A  +   ++  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
             C P+V +   L+ GLC    +  AL L   MA+  G       P+ V+Y+T+I+G  K
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTTVINGFFK 208

Query: 220 EGFVDKAKALFLQMKDENINPDVV-----------------------------------T 244
           EG  DKA + + +M D  I+PDVV                                   T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YNS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA ++ D M 
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RG+ P+  TY TL+ G+   G +     L   M   G   D   +NILI  Y K ++V+
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+ ++ +M   G+ P VVTY  +   L +   V+ A+  F++M  +G+  +   YT+ I
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 425 DGL-----------------------------------CKNGYIIEAVELFRTLRILKCE 449
             L                                   CK G +IE+ +LF  +  +  +
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVK 508

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y+ LIDG C +G++  A +L  S+    + P+ VTYN +I G C   +MD A  L
Sbjct: 509 PNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALAL 568

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M  +  +P++IT+++++ G       +   EL   + +     + S  +I++  L K
Sbjct: 569 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628

Query: 570 NEISLKSLPSF 580
           N ++ ++L  F
Sbjct: 629 NNLTDEALRMF 639



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 254/518 (49%), Gaps = 12/518 (2%)

Query: 59  RMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRV 112
           R   S P V S+  ++    K    +K Y T   +    + P++ TY+ +I   CK   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                    ++++   PN  T+NS++ G  +  +  EA     K+++ G EP+V+TYN+L
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSL 307

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           ++ LC+ G +  A  +F+ M     E      P+  TY T++ G   +G + +  AL   
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLE------PDIATYCTLLQGYATKGALVEMHALLDL 361

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    I+PD   +N LI         +EA  +F +M   G+ P+VVT+  ++  LCK+  
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D+A    + M+  G+ PN   Y +L+   C+  K ++AEEL   M   G   + + +N 
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I+ +CK   V E+  L+  MV  G+KP V+TY+TL  G     +++ A KL   M   G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D  TY T I+G C+   + +A+ LF+ +       +I  YN ++ GL  + R   A 
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           EL+  +        + TYNI++ GLC +   D+A  +F ++       +  TF+++I   
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +++    +  +L   +    ++PD    S++ + L++ 
Sbjct: 662 LKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 699



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 145/334 (43%), Gaps = 41/334 (12%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG---VRPNACTYN 316
           +A+ +F E++ +G   S+   N  + ++ ++      SR  + M + G   V P   TY 
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGAGKVTPTVHTYG 91

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL-YREMVS 375
            L+   C  G+++      G++   G + + +++  L+ G C +K   +A+ +  R M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRTYTTFIDGLCKNGYI 433
               P V +   L  GL + ++ + AL+L   M   R G +A                  
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP----------------- 194

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
                            D+ +Y  +I+G  K G    A+  +  +    + P+VVTY+ +
Sbjct: 195 -----------------DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSI 237

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  LC    MDKA ++   M +N   P+ +T++ ++HG+    +P +    L KM+   V
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            PD    + ++D L KN  S ++   F    ++G
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 162/464 (34%), Positives = 261/464 (56%), Gaps = 7/464 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN YT+ +++  FCK G++  G+  F ++L +  +P+   +N LI G   + R+ EA  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           + ++ + G EP++ TYN+L+N  C+      A+ LF+ MA    E      P+ VTYSTI
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE------PDVVTYSTI 119

Query: 214 IDGLCKEGFVDKA-KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I GLCK G V +A + LF +M +   + + V YN+LI+GLC   +   A +L  EM  +G
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P  +T+N I+  LC+  K+ EA +  D M  RG  P+   YN L+D     GK + A 
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +LF  + + G   D V+YN ++ G  +   ++EA  ++++MV+ G  P   TY+ +  G 
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGH 299

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               +V+ A K+ +EM + G   D  TY   +DGLCK   + +A ELF T+    C  DI
Sbjct: 300 CRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 359

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            +Y+ +++GLCK+ ++  A  LF  +    LVP+VVT+NI++ GLC  G++D+A+DL   
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQ 419

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           M  +  APD + ++ L++G  +     + + L   MKEK  + D
Sbjct: 420 MTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 255/470 (54%), Gaps = 15/470 (3%)

Query: 60  MHPSPPPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRV 112
           M    P   +F ++L S  K        K ++  L+  G+ P+   YNILI+ + K GRV
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLD-NGISPDGIEYNILIDGYAKKGRV 59

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                 +  ++     P+  T+NSL+     E+++ EA  LF  +   G EP+V+TY+T+
Sbjct: 60  DEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI 119

Query: 173 INGLCRTGHTMIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           I+GLC+TG    AL  LF +M      I   C  NTV Y+ +I+GLCK+  +++A  L  
Sbjct: 120 ISGLCKTGKVTEALEMLFHKM------IERGCSANTVAYNALINGLCKDENIERAYKLLE 173

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M  +   PD +TYN+++ GLC     +EAK+ F  M  +G  P VV +N ++D L K  
Sbjct: 174 EMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 233

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K DEA +L   ++ +G  P+  TYN+++ G      ++ AEE+F  M + GC  +  +Y+
Sbjct: 234 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS 293

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           I+++G+C+ K+V++A  +  EM   G  P VVTYN L  GL + + V+ A +LF  M  +
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 353

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G A D  +Y+  ++GLCK   + +A  LF  +   K   D+  +N L+DGLCK+G+L  A
Sbjct: 354 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 413

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            +L   +      P+ V YN ++ GL   G+  +A  L   M+E     D
Sbjct: 414 KDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/409 (33%), Positives = 225/409 (55%), Gaps = 7/409 (1%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN  T+  ++   C+ G       LFE+M + NG       P+ + Y+ +IDG  K+G
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLD-NG-----ISPDGIEYNILIDGYAKKG 57

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A  L+ +M    + P + TYNSL++  C      EA  LF  M ++G +P VVT++
Sbjct: 58  RVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYS 117

Query: 282 VIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            I+  LCK  K+ EA  +L   M++RG   N   YN L++G C    I RA +L   M S
Sbjct: 118 TIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS 177

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   D+++YN +++G C+  +V EA   +  M S+G  P VV YN L   L++  + + 
Sbjct: 178 KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDE 237

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A+KLF ++   G   DT TY + + GL +   + EA E+F+ +    C  +   Y+ ++ 
Sbjct: 238 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLS 297

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G C++ ++  A ++   +     VP+VVTYNI++ GLC    +DKA +LF  M +N  AP
Sbjct: 298 GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           D++++ ++++G  + N+      L  +M E+K++PD    +I++D L K
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 406



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 185/339 (54%), Gaps = 1/339 (0%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P+  T+  ++   C      +  +LF +M+D G+ P  + +N+++D   K  ++DEA+R
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + MV  G+ P+  TYN+L++ FC   K+  A ELF +M   G + D V+Y+ +I+G C
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 359 KNKEVEEALS-LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           K  +V EAL  L+ +M+ +G     V YN L  GL +   +E A KL +EM   G   D 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + GLC+ G + EA + F ++       D+ AYN L+D L K G+   A +LF  
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P+ VTYN ++ GL     MD+A ++F  M  +  AP+  T+ +++ G  R  +
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKK 304

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
               +++L +M +   +PD    +I++D L K  +  K+
Sbjct: 305 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 1/252 (0%)

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           R   PN  T+  ++  FC  GK+    +LF  M   G   D + YNILI+GY K   V+E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A  LY EMVS G++P++ TYN+L     +  +++ A++LF  M   G   D  TY+T I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 426 GLCKNGYIIEAVE-LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           GLCK G + EA+E LF  +    C  +  AYN LI+GLCK   ++ A++L   +     V
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+ +TYN ++ GLC  G++ +A+  F  M     +PDV+ ++ L+    +  +  +  +L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 545 LHKMKEKKVMPD 556
              +  K  MPD
Sbjct: 242 FKDVIAKGYMPD 253


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  304 bits (778), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 191/571 (33%), Positives = 299/571 (52%), Gaps = 53/571 (9%)

Query: 13  FASAPIS-AFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN 71
           F+++P S +  +  + LL   R L + +  ++V     +   F  ML ++P P  +  FN
Sbjct: 27  FSTSPPSISDAAARTRLLNSIRTLQSADAAVSV-----SVDFFHRMLTLNPFPC-IQDFN 80

Query: 72  ILLASLAKNKHYDT------RLNATGL-FPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           +L   +AK++H+ T       L++ G    ++ T NILINC C++ + +LGF   G + +
Sbjct: 81  LLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMTK 140

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P   T N++  GL                              ++NGLC+ G T  
Sbjct: 141 IGLEPTLVTLNTIANGL-----------------------------CIVNGLCKIGDTSG 171

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL   ++M   N E      PN V Y+ I+DGLCK G V +A  LF +M   N+ P+VVT
Sbjct: 172 ALESLKKMVKRNLE------PNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVT 225

Query: 245 YNSLIHGLC-HANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           YN LI GLC     W E   LF EM+ ++G+ P V TF+++++  CK   +  A  ++  
Sbjct: 226 YNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGF 285

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM--ESMGCKHDDVSYNILINGYCKN 360
           M++ GV  N  TYN+L+ G+CL  ++  A  +F  M  E  GC    V+YN LI+G+CK 
Sbjct: 286 MIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKV 345

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K+V +A+SL  EMV KG+ P V T+ +L  G FE+ +   A +LF  M+  G     +T 
Sbjct: 346 KKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTC 405

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              +DGL K     EA+ LFR +     +LDI  YN ++DG+CK G+L  A +L   +  
Sbjct: 406 AVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLV 465

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L  +  T+NIMI+GLC +G +D A +L   M+EN   P+  ++++ + G +R  + S+
Sbjct: 466 KGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISR 525

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             + L  MK+K    DA+   +++  L  NE
Sbjct: 526 SRKYLQIMKDKGFPVDATTAELLIRFLSANE 556



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 185/370 (50%), Gaps = 13/370 (3%)

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ-PSVVTFNVIMDELC 288
           F +M   N  P +  +N L   +  +  +  A  L   +   G +   V T N++++ LC
Sbjct: 64  FHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLC 123

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM------G 342
           + RK      +L LM + G+ P   T NT+ +G C++  + +  +  G++ES+       
Sbjct: 124 RLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRN 183

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIHQVEHA 401
            + + V YN +++G CK   V EAL L+ EM    ++P VVTYN L  GL  E+      
Sbjct: 184 LEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREG 243

Query: 402 LKLFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           + LF+EM    G+  D +T++  ++G CK G ++ A  +   +  +  EL++  YN LI 
Sbjct: 244 VGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLIS 303

Query: 461 GLCKSGRLKFA---WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           G C   R++ A   ++L      G L P+VVTYN +I G C   +++KA  L  +M    
Sbjct: 304 GYCLRNRMEEAVRVFDLMVREGEGCL-PSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKG 362

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             PDV T+  LI GF  + +P    EL   MK++  +P     ++V+D L K  +  +++
Sbjct: 363 LDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAM 422

Query: 578 PSFLVQERQG 587
             F   E+ G
Sbjct: 423 TLFRAMEKSG 432



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 52/360 (14%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH--------YDTRLNATGLFPNLYTY 99
            EA  +F Y + +    P V ++N L+  L             ++  +   G+ P++ T+
Sbjct: 205 GEALGLF-YEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTF 263

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-- 157
           +IL+N FCK G +       G ++R     N  T+NSLI G    +R+ EA  +F  +  
Sbjct: 264 SILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVR 323

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           +  GC P+V+TYN+LI+G C+      A++L  EM      +G    P+  T++++I G 
Sbjct: 324 EGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEM------VGKGLDPDVFTWTSLIGGF 377

Query: 218 CKEGFVDKAKALFLQMKDENINP-----------------------------------DV 242
            + G    AK LF+ MKD+   P                                   D+
Sbjct: 378 FEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDI 437

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN ++ G+C     N+A++L   ++ +G++    T+N+++  LC+   +D+A  LL  
Sbjct: 438 VIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRK 497

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M + G  PN C+YN  + G      I+R+ +    M+  G   D  +  +LI     N+E
Sbjct: 498 MKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSANEE 557


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 167/470 (35%), Positives = 263/470 (55%), Gaps = 51/470 (10%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIG 110
           M++  P P  V  F+ +L+ +AK+K+YD        +   G+  +LY+YNI+INC C+  
Sbjct: 1   MIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRC- 58

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
                                             SR + A ++  K+  FG EP+V+T +
Sbjct: 59  ----------------------------------SRFVIALSVVGKMMKFGYEPDVVTVS 84

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           +LING C+      A++L  +M     E+G   +P+ V Y+TIIDG CK G V+ A  LF
Sbjct: 85  SLINGFCQGNRVFDAIDLVSKME----EMGF--RPDVVIYNTIIDGSCKIGLVNDAVELF 138

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M+ + +  D VTYNSL+ GLC +  W++A RL  +M+ + + P+V+TF  ++D   K 
Sbjct: 139 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 198

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K  EA +L + M +R V P+  TYN+L++G C+ G+++ A+++   M + GC  D V+Y
Sbjct: 199 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 258

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N LING+CK+K V+E   L+REM  +G+    +TYNT+  G F+  + + A ++F  M  
Sbjct: 259 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 318

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
                + RTY+  + GLC N  + +A+ LF  ++  + ELDI  YN +I G+CK G ++ 
Sbjct: 319 ---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 375

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           AW+LF SL    L P+VV+Y  MI G C   Q DK+  L+  M+E+   P
Sbjct: 376 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 224/427 (52%), Gaps = 9/427 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+   F+ ++  +          +LF  ++  G   ++ +YN +IN LCR    +IAL++
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E      P+ VT S++I+G C+   V  A  L  +M++    PDVV YN++
Sbjct: 68  VGKMMKFGYE------PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 121

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I G C     N+A  LF  M   GV+   VT+N ++  LC + +  +A+RL+  MV R +
Sbjct: 122 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            PN  T+  ++D F   GK + A +L+  M       D  +YN LING C +  V+EA  
Sbjct: 182 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 241

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +   MV+KG  P VVTYNTL  G  +  +V+   KLF EM + G+  DT TY T I G  
Sbjct: 242 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 301

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           + G    A E+F  +       +I+ Y+ L+ GLC + R++ A  LF ++    +  ++ 
Sbjct: 302 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TYNI+I G+C  G ++ A DLF  +      PDV+++  +I GF R  +  K + L  KM
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 418

Query: 549 KEKKVMP 555
           +E  ++P
Sbjct: 419 QEDGLLP 425



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 196/365 (53%), Gaps = 3/365 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V +S ++  + K    D   +LF  M+   I  D+ +YN +I+ LC  + +  A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +MM  G +P VVT + +++  C+  ++ +A  L+  M + G RP+   YNT++DG C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G +N A ELF  ME  G + D V+YN L+ G C +    +A  L R+MV + I P V+T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +  +     +  +   A+KL++EM R  V  D  TY + I+GLC +G + EA ++   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  D+  YN LI+G CKS R+    +LF  +    LV + +TYN +IQG    G+ D
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+++F  M+   + P++ T+ +L++G        K   L   M++ ++  D +  +IV+
Sbjct: 308 AAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 565 DLLVK 569
             + K
Sbjct: 365 HGMCK 369



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 207/396 (52%), Gaps = 13/396 (3%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK--PNTVTYSTIIDGLCKEG 221
           P+++ ++ +++ + ++ +  + ++LF  M         VC    +  +Y+ +I+ LC+  
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHME--------VCGIGHDLYSYNIVINCLCRCS 59

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
               A ++  +M      PDVVT +SLI+G C  N   +A  L  +M + G +P VV +N
Sbjct: 60  RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 119

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+D  CK   +++A  L D M + GVR +A TYN+L+ G C  G+ + A  L   M   
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               + +++  +I+ + K  +  EA+ LY EM  + + P V TYN+L  GL    +V+ A
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++ D M   G   D  TY T I+G CK+  + E  +LFR +       D   YN +I G
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             ++GR   A E+F  +      PN+ TY+I++ GLC + +++KA  LF +M+++    D
Sbjct: 300 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           + T++++IHG  +I       +L   +  K + PD 
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 392



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 35/290 (12%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI---------- 352
           M+Q    P+   ++ ++         +    LF  ME  G  HD  SYNI          
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 353 -------------------------LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
                                    LING+C+   V +A+ L  +M   G +P VV YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G  +I  V  A++LFD M+RDGV AD  TY + + GLC +G   +A  L R + +  
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              ++  +  +ID   K G+   A +L+  +    + P+V TYN +I GLC  G++D+A+
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +   M      PDV+T++ LI+GF +     +  +L  +M ++ ++ D 
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 290


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 179/538 (33%), Positives = 279/538 (51%), Gaps = 35/538 (6%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V S+N ++    +    D   N        G+ P++ TYN +I+  CK   V     
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F ++L     P+  T+N LI G  +  +  E   L  ++     EP+   Y  L++ LC
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLC 420

Query: 178 RTGHTMIALNLFEEMANGNGEIGV-----VC----------KPNTVTYSTIIDGLCKEGF 222
           + G    A N+F+ +     +        VC           PN V Y  +ID LCK G 
Sbjct: 421 KNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGR 480

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A   F QM +E            ++GLC    W +A+ L  EM+DQG++  VV FN 
Sbjct: 481 VDDAILKFNQMINE------------VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNT 528

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M +LC+  ++ EA RL++LM++ GVRP+  +YNTL+DG CL G+ + A +L   M S+G
Sbjct: 529 LMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG 588

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K ++ +YN L++GYCK + +++A SL REM+  G  P VVTYNT+  GLF+  +   A 
Sbjct: 589 LKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAK 648

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L+  M       D  TY   ++GLCKN  + EA ++F++L     +L I  +N +I  L
Sbjct: 649 ELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGAL 708

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K G+ + A +LF ++    LVP+V TY ++ + L  +G +++   LF  MEEN  AP+ 
Sbjct: 709 LKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNS 768

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS--LKSLP 578
              + L+  F+   + S+    L K+ EK    +AS  S+++ L  + E     KSLP
Sbjct: 769 RMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLP 826



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 185/565 (32%), Positives = 283/565 (50%), Gaps = 57/565 (10%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT---GLF-------- 93
           +  ++A  +FD +L  H  P  V++FN LL ++++     + L +     LF        
Sbjct: 130 LASHDALKLFDLLLP-HARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECS 188

Query: 94  ----PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
               P+  TY+ILI CFC++GR+  GF  FG IL++ +  N   FN L+KGL    R+ E
Sbjct: 189 DKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDE 248

Query: 150 AA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           A   L  ++  FGC PNV++YNTL+ G C       AL L   MA+   + G+ C P+ V
Sbjct: 249 ATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMAD---DQGLSCPPDVV 305

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +Y+T+I+G  +EG VDKA  LFLQM D  I PDVVTYN++I GLC A   + AK +F +M
Sbjct: 306 SYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQM 365

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +D+GV+PS  T+N ++       K  E  RLL+ M    + P+   Y  L+D  C  G+ 
Sbjct: 366 LDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRC 425

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  +F S+   G K D +              ++EA+ ++ +M  +G+ P VV Y  L
Sbjct: 426 TEARNIFDSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGLSPNVVNYGAL 471

Query: 389 F-----------------------LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
                                    GL  + + E A +L  EM   G+  D   + T + 
Sbjct: 472 IDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMC 531

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR   A +L   +    L P
Sbjct: 532 DLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKP 591

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           N  TYN ++ G C   ++D A  L  +M  N   PDV+T++ ++HG  +    S+  EL 
Sbjct: 592 NEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELY 651

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKN 570
             M   +   D    +I+++ L KN
Sbjct: 652 LNMINSRTQWDMYTYNIILNGLCKN 676


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 173/507 (34%), Positives = 278/507 (54%), Gaps = 59/507 (11%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNI 101
           ++A  +F+ +LR +P+PP    FN +L SL K+KHY T L+ +      G+ PNL+  NI
Sbjct: 68  DDAVSLFNRLLRQNPTPPAFE-FNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI CFC++G +                                 +I +A     KL A G
Sbjct: 127 LIYCFCQLGLI-------------------------------PCQIHQAFLFHDKLVALG 155

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              + ++Y TLI+GLC+ G T  AL+L + +       G + + N V Y+T+I G+CK+ 
Sbjct: 156 FHLDQVSYGTLIHGLCKVGETRAALDLLQRVD------GKLVQLNAVMYNTVIYGMCKDK 209

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V+ A  L+ +M  + I+P+VVTY++LI G        +A  LF +++ + ++P   TFN
Sbjct: 210 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFN 269

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  CK+RKM E   +  +M+++G+ P+  TYN+LMDG+CL+ ++N A+ +F +M   
Sbjct: 270 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG 329

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  SYNILING+CK K+V++A++L+ EM  K I P VVTYN+L  GL +  ++ +A
Sbjct: 330 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 389

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L+L D+M   GV  +  TY + ID L K   + +A+ L    +    +  +  Y  LIDG
Sbjct: 390 LQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 449

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LCK       +++            V TYN+MI G C  G  D+A  L   M++++  P+
Sbjct: 450 LCKVE----GYDI-----------TVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPN 494

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKM 548
            +T+++ I   +  NE  K  +L  +M
Sbjct: 495 AVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 233/472 (49%), Gaps = 44/472 (9%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  +++S     H+ + + +A +LF +L      P    +N ++  L ++ H    L+L 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG-----------FVDKAKALFLQMKDENI 238
           ++M           KPN    + +I   C+ G           F DK  AL   +     
Sbjct: 110 QKMEFRG------IKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHL----- 158

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D V+Y +LIHGLC   +   A  L   +  + VQ + V +N ++  +CK++ +++A  
Sbjct: 159 --DQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFD 216

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   MV +G+ PN  TY+ L+ GF ++GK+  A +LF  +     K D  ++NIL++G+C
Sbjct: 217 LYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFC 276

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+++++E  +++  M+ +GI P VVTYN+L  G   + +V  A  +F+ M + GV  D R
Sbjct: 277 KDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR 336

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y   I+G CK   + +A+ LF  +       ++  YN LIDGL KSGR+ +A +L   +
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 396

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD----------------- 521
               + PN++TYN +I  L    Q+DKA  L    ++    P                  
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGY 456

Query: 522 ---VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              V T++++IHGF +     +   LL KMK+   +P+A    I +  L+ N
Sbjct: 457 DITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDN 508



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 189/357 (52%), Gaps = 27/357 (7%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N ++  + K+KH +      + + + G+ PN+ TY+ LI+ F  +G++      F +I+
Sbjct: 198 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 257

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                P+  TFN L+ G   + ++ E   +F  +   G  P+V+TYN+L++G C      
Sbjct: 258 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVN 317

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A ++F  MA G    GV   P+  +Y+ +I+G CK   VDKA  LF +M  +NI P+VV
Sbjct: 318 TAKSIFNTMAQG----GV--NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYNSLI GL  +   + A +L  +M D+GV P+++T+N I+D L K  ++D+A  L+   
Sbjct: 372 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 431

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
             +G++P+  TY  L+DG C +   +                   +YN++I+G+CK    
Sbjct: 432 KDQGIQPSMYTYTILIDGLCKVEGYDITVN---------------TYNVMIHGFCKKGLF 476

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +EALSL  +M      P  VTY      L + ++ + A KLF EM   G+   + +Y
Sbjct: 477 DEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 196/410 (47%), Gaps = 39/410 (9%)

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           ++ K N ++YS+          VD A +LF ++  +N  P    +N ++  L  +  ++ 
Sbjct: 45  LLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHT 104

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNR----KMDEASRLLDLMVQRGVRPNACTYN 316
              L  +M  +G++P++   N+++   C+      ++ +A    D +V  G   +  +Y 
Sbjct: 105 VLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYG 164

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           TL+ G C +G+   A +L   ++    + + V YN +I G CK+K V +A  LY EMVSK
Sbjct: 165 TLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK 224

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDE----------------------------- 407
           GI P VVTY+ L  G F + +++ A+ LF++                             
Sbjct: 225 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284

Query: 408 ------MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
                 M + G+  D  TY + +DG C    +  A  +F T+       DI++YN LI+G
Sbjct: 285 KTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 344

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            CK  ++  A  LF  +    ++PNVVTYN +I GL   G++  A  L   M +    P+
Sbjct: 345 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 404

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++T++ +I    + ++  K   L+ K K++ + P     +I++D L K E
Sbjct: 405 ILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE 454



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 32/277 (11%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FNIL+    K++           +   G+ P++ TYN L++ +C +  V+     
Sbjct: 263 PDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSI 322

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + +    P+  ++N LI G     ++ +A  LF ++      PNV+TYN+LI+GL +
Sbjct: 323 FNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSK 382

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    AL L ++M +     GV   PN +TY++IID L K   VDKA AL  + KD+ I
Sbjct: 383 SGRISYALQLVDQMHDR----GV--PPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 436

Query: 239 NPD--------------------VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            P                     V TYN +IHG C    ++EA  L  +M D    P+ V
Sbjct: 437 QPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAV 496

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
           T+ + +  L  N + D+A +L   M+ RG+   + +Y
Sbjct: 497 TYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 28/232 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           N A  IF+ M +   +P  + S+NIL+    K K  D  +N         + PN+ TYN 
Sbjct: 317 NTAKSIFNTMAQGGVNPD-IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 375

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+   K GR+S       ++      PN  T+NS+I  L    ++ +A AL TK K  G
Sbjct: 376 LIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 435

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P++ TY  LI+GLC+     I +N                     TY+ +I G CK+G
Sbjct: 436 IQPSMYTYTILIDGLCKVEGYDITVN---------------------TYNVMIHGFCKKG 474

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
             D+A +L  +MKD +  P+ VTY   I  L   N+ ++A++LF EM+ +G+
Sbjct: 475 LFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 4/248 (1%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           +SY+     +  N +V++A+SL+  ++ +   P    +N +   L +       L L  +
Sbjct: 52  ISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQK 111

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYI---IEAVELFR-TLRILKCELDIQAYNCLIDGLC 463
           M+  G+  +       I   C+ G I   I    LF   L  L   LD  +Y  LI GLC
Sbjct: 112 MEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC 171

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K G  + A +L   +   ++  N V YN +I G+C D  ++ A DL+ +M     +P+V+
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           T+  LI GF  + +     +L +K+  + + PD    +I+VD   K+    +    F + 
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291

Query: 584 ERQGEVGE 591
            +QG + +
Sbjct: 292 MKQGIIPD 299


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 164/480 (34%), Positives = 261/480 (54%), Gaps = 48/480 (10%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           NEA  +F  M+   P P  V  F  LL+ +AK K +D       ++   G+ P LYT NI
Sbjct: 64  NEALDLFTRMVHSRPLPSIVD-FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++NC C+                                    S+   A+    K+   G
Sbjct: 123 VMNCVCR-----------------------------------SSQPCRASCFLGKMMKLG 147

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+++T+ +L++G C       AL LF+++      +G+  +PN VTY+T+I  LCK  
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQI------VGMGFRPNVVTYTTLIHCLCKNR 201

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A  +F QM D  I P+VVTYNSL+ GLC    W++A  L  +MM +G+QP+V+TF 
Sbjct: 202 HLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFT 261

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K  K+ EA  L  +M+Q  V P+  TY  L++G C  G+++ A ++F  MES 
Sbjct: 262 ALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESN 321

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   ++V+Y  LI+G+CK+K VE+   ++ EM  KG+    +TY  L  G   + + + A
Sbjct: 322 GYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVA 381

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++F++M       D RTY   +DGLC NGY+ +A+ +F+ +R  + +++I  Y  +I G
Sbjct: 382 QEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQG 441

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +CK G+++ A++LFCSL    + PNV+TY  MI G C  G + +A  LF  M+E+   P+
Sbjct: 442 MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/441 (34%), Positives = 235/441 (53%), Gaps = 6/441 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R++ S   P+   F  L+  +    R     +LF +++  G  P + T N ++N +CR
Sbjct: 70  FTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCR 129

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +     A     +M     E      P+ VT+++++ G C    ++ A ALF Q+     
Sbjct: 130 SSQPCRASCFLGKMMKLGFE------PDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTY +LIH LC     N A  +F +M D G++P+VVT+N ++  LC+  +  +A+ 
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M++RG++PN  T+  L+D F  +GKI  A+EL+  M  M    D  +Y  LING C
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
               ++EA  ++  M S G  P  VTY TL  G  +  +VE   K+F EM + G+ A+T 
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I G C  G    A E+F  +   +   DI+ YN L+DGLC +G ++ A  +F  +
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYM 423

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  N+VTY I+IQG+C  G+++ A DLF  +      P+VIT+  +I GF R    
Sbjct: 424 RKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFI 483

Query: 539 SKVNELLHKMKEKKVMPDASI 559
            + + L  KMKE   +P+ S+
Sbjct: 484 HEADALFKKMKEDGFLPNESV 504



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 185/357 (51%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           ++A  LF +M      P +V +  L+  +     ++    LF +M   G+ P + T N++
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           M+ +C++ +   AS  L  M++ G  P+  T+ +L+ GFC   +I  A  LF  +  MG 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + + V+Y  LI+  CKN+ +  A+ ++ +M   GI+P VVTYN+L  GL EI +   A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  +M + G+  +  T+T  ID   K G I+EA EL++ +  +    D+  Y  LI+GLC
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             GRL  A ++F  +      PN VTY  +I G C   +++    +F +M +     + I
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTI 363

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           T+ +LI G+  +  P    E+ ++M  ++  PD    ++++D L  N    K+L  F
Sbjct: 364 TYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIF 420



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 195/380 (51%), Gaps = 8/380 (2%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL+LF  M +          P+ V ++ ++  + K    D   +LF QM+   I+P + T
Sbjct: 66  ALDLFTRMVHSRP------LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYT 119

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            N +++ +C ++    A     +MM  G +P +VTF  ++   C   ++++A  L D +V
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             G RPN  TY TL+   C    +N A E+F  M   G + + V+YN L++G C+     
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L R+M+ +GI+P V+T+  L     ++ ++  A +L+  M +  V  D  TYT  I
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLC  G + EA ++F  +       +   Y  LI G CKS R++   ++F  +    LV
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N +TY ++IQG C  G+ D A+++F  M    A PD+ T+++L+ G        K   +
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMI 419

Query: 545 LHKMKEKKVMPDASIVSIVV 564
              M+++++  D +IV+  +
Sbjct: 420 FKYMRKREM--DINIVTYTI 437



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 168/321 (52%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y  ++    H   +NEA  LF  M+     PS+V F  ++  + K ++ D    L + M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             G+ P   T N +M+  C   +  RA    G M  +G + D V++  L++G+C    +E
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +AL+L+ ++V  G +P VVTY TL   L +   + HA+++F++M  +G+  +  TY + +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GLC+ G   +A  L R +     + ++  +  LID   K G++  A EL+  +    + 
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V TY  +I GLC  G++D+AR +F  ME N   P+ +T+  LIHGF +        ++
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 545 LHKMKEKKVMPDASIVSIVVD 565
            ++M +K ++ +    ++++ 
Sbjct: 350 FYEMSQKGLVANTITYTVLIQ 370



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 1/218 (0%)

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL NG   N +  EAL L+  MV     P++V +  L   + ++ + +  + LF++MQ  
Sbjct: 53  ILRNGL-HNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL 111

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G++    T    ++ +C++     A      +  L  E D+  +  L+ G C   R++ A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             LF  +      PNVVTY  +I  LC +  ++ A ++F  M +N   P+V+T++ L+ G
Sbjct: 172 LALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG 231

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              I   S    LL  M ++ + P+    + ++D  VK
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVK 269


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 175/526 (33%), Positives = 274/526 (52%), Gaps = 22/526 (4%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           +F+ ML    +P   + +++++ SL +    D       +    G  P +  Y IL   F
Sbjct: 147 MFERMLDAGYAPDSYT-YHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEPN 165
           CK GR+         I R+  +P+A  +N++I G H      + A  F K +      P+
Sbjct: 206 CKTGRLKDAL----EIFRNIPSPDAIAYNAIIHG-HCRKNDCDGALEFLKEMNERKVAPD 260

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V TYN LI+GLC+   T  A  +  EM +     GV   P+TVT+++I+DGLCK G  ++
Sbjct: 261 VFTYNILIDGLCKASKTDKASEMLHEMVDR----GVT--PDTVTFNSIMDGLCKAGKFER 314

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A +L   M + N  P   TYN+LI GLC   + + AK L  E +  G  P VVT++++ D
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LCK  ++DEA  L+  M  +G  PN  TYNTL+DG C   K  +A EL  S+ S G   
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D V+Y I+++G CK   +++AL +   M+ +G  P+V+TY  L  GL    +V+ A  +F
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM      AD   Y + ++G CK+    EA ++   +R       I  YN L+DG CK 
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKE 551

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           GRL     +F  +     VPN+ TYNI++ GLC  G++D+A      M      PDV+++
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +++I G  + ++P +  ++L +M +  + PDA   + ++    K E
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 253/511 (49%), Gaps = 42/511 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   + +T N  +    + G        F R+L + + P++ T++ +IK L   ++I +A
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  K K  G +P V  Y  L    C+TG    AL +F  + +          P+ + Y
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----------PDAIAY 229

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + II G C++   D A     +M +  + PDV TYN LI GLC A+  ++A  +  EM+D
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +GV P  VTFN IMD LCK  K + A  LL +M +R  RP+ CTYNTL+ G C    ++R
Sbjct: 290 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 349

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A++L     S G   D V+Y+IL +G CK   ++EA  L +EM  KG  P +VTYNTL  
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  + E A +L + +   G   D  TYT  +DGLCK G + +A+++   +    C  
Sbjct: 410 GLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 469

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELF---------------CSLPHGVL------------ 483
            +  Y  L++GLC++GR+  A  +F                SL +G              
Sbjct: 470 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 529

Query: 484 -----VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P +  YN ++ G C +G++D+  ++F DM      P++ T+++++ G  +  + 
Sbjct: 530 DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 589

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +    L  M     +PD    +I++D L K
Sbjct: 590 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 620



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 173/580 (29%), Positives = 277/580 (47%), Gaps = 96/580 (16%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L++ L K ++ D   +      ++G  P++ TY+IL +  CK GR+   F  
Sbjct: 329 PSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 388

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +     TPN  T+N+LI GL   S+  +A  L   L + G  P+V+TY  +++GLC+
Sbjct: 389 VKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCK 448

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL + E M          C P+ +TY+ +++GLC+ G VD+A  +F +M  ++ 
Sbjct: 449 EGRLDKALKMVEGMLKRG------CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ--PSVVTFNVIMDELCKNRKMDEA 296
             D + Y SL++G C ++   EA+++       G++  P +  +N +MD  CK  ++DE 
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEI 557

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             + + M  RG  PN  TYN +MDG C  GK++ A     SM S GC  D VSYNI+I+G
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617

Query: 357 -----------------------------------YCKNKEVEEALSLYREMVSKGIKPT 381
                                              +CK +  ++A+ + + M+  G+ P 
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VTYNTL  GL + +++  A +L  EM R+G V +   TY T ID LCK G + +A+ L 
Sbjct: 678 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 737

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +     E +   YN  ID LCK GRL  A  L   +     + + V+Y  +I GLC  
Sbjct: 738 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKA 794

Query: 501 GQMDKAR-------------------DLFLD-----------------MEENAAAPDVIT 524
            Q+D+A                    +L +D                 M +   +P VIT
Sbjct: 795 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVIT 854

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++M+I    ++++  K  EL  +M  + ++  AS VS  V
Sbjct: 855 YNMVITCLCKLDKVDKAWELFDEMAVRGIV--ASSVSYTV 892



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 261/553 (47%), Gaps = 72/553 (13%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++IL   L K    D        ++  G  PNL TYN LI+  CK  +    +  
Sbjct: 364 PDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ S F P+  T+  ++ GL  E R+ +A  +   +   GC P+VITY  L+ GLCR
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 483

Query: 179 TGHTMIALNLFEEMANG-------------NGEI-------------GVVCKPNTVTYST 212
           TG    A ++F+EM +              NG               G+   P    Y+ 
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNA 543

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++DG CKEG +D+   +F  M      P++ TYN ++ GLC     +EA      M   G
Sbjct: 544 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 603

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P VV++N+I+D L K  K  EA ++LD M+Q G+ P+A TYNTLM  FC   + + A 
Sbjct: 604 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 663

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLG 391
            +  +M   G   D+V+YN LI+G  +   + +A  L  EM+  G +     TYNT+   
Sbjct: 664 GILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDR 723

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +   ++ AL L D M   GV A+T TY  FID LCK G + EA  L   +  L+ E+ 
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEV- 782

Query: 452 IQAYNCLIDGLCKSGRLKFAWEL---------FCSLPH---------------------- 480
             +Y  +I GLCK+ +L  A +L          C   H                      
Sbjct: 783 --SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840

Query: 481 GVLV-----PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
           G++V     P+V+TYN++I  LC   ++DKA +LF +M         +++ +LI+G    
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900

Query: 536 NEPSKVNELLHKM 548
               +  ++L +M
Sbjct: 901 GRGKEALQVLEEM 913



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 248/528 (46%), Gaps = 66/528 (12%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N L+  L K     K Y+    L ++G  P++ TY I+++  CK GR+      
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 458

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L+   TP+  T+ +L++GL    R+ EA  +F ++ +  C  + + Y +L+NG C+
Sbjct: 459 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 518

Query: 179 TGHTMIA------------LNLFEEMANGNGEIGVV--------------CKPNTVTYST 212
           +  T  A            ++++  + +G  + G +              C PN  TY+ 
Sbjct: 519 SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 578

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++DGLCK G VD+A      M      PDVV+YN +I GL  A+   EA+++  +M+  G
Sbjct: 579 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 638

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P  VT+N +M + CK  + D+A  +L  M++ GV P+  TYNTL+ G     ++  A 
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698

Query: 333 ELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN----- 386
           EL   M   GC      +YN +I+  CK   +++AL L   M   G++   VTYN     
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 758

Query: 387 ---------------------------TLFLGLFEIHQVEHALKLFDEM-QRDGVAADTR 418
                                      T+ +GL +  Q++ A KL  EM    G+   + 
Sbjct: 759 LCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 818

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+   ID   K   + EA+ L   +    C   +  YN +I  LCK  ++  AWELF  +
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
               +V + V+Y ++I GLC  G+  +A  +  +M  +    D + ++
Sbjct: 879 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWE 926



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 169/344 (49%), Gaps = 4/344 (1%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A   F+   D        T N  +  L      +    +F  M+D G  P   T+++++ 
Sbjct: 109 AIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIK 168

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LC+  ++D+A  +LD    RG +P    Y  L   FC  G++  A E+F ++ S     
Sbjct: 169 SLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----P 224

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D ++YN +I+G+C+  + + AL   +EM  + + P V TYN L  GL +  + + A ++ 
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEML 284

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM   GV  DT T+ + +DGLCK G    A  L   +    C      YN LI GLCK 
Sbjct: 285 HEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQ 344

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
             +  A +L         VP+VVTY+I+  GLC  G++D+A +L  +M      P+++T+
Sbjct: 345 QNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTY 404

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + LI G  + ++  K  ELL  +     +PD    +I+VD L K
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCK 448



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 180/332 (54%), Gaps = 19/332 (5%)

Query: 54  FDYMLRMHPSP--PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINC 105
           F ++  MH +   P V S+NI++  L K +K  + R     +   G+ P+  TYN L+  
Sbjct: 593 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 652

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           FCK  R          ++++   P+  T+N+LI GL   +R+ +A  L  ++   GC  +
Sbjct: 653 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 712

Query: 166 V-ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
              TYNT+I+ LC+ G    AL L + M  G+G      + NTVTY+  ID LCKEG +D
Sbjct: 713 ACTTYNTIIDRLCKEGCLKQALLLMDHM-TGHG-----VEANTVTYNIFIDRLCKEGRLD 766

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVI 283
           +A +L  +M   +   D V+Y ++I GLC A   + A +L  EM+  +G+  +  TFN++
Sbjct: 767 EASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLL 823

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D   K +++DEA  LL LMVQRG  P+  TYN ++   C + K+++A ELF  M   G 
Sbjct: 824 IDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGI 883

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
               VSY +LI G C     +EAL +  EM S
Sbjct: 884 VASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 915



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 4/209 (1%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K+ + A+  +     +G K +  T N     L E    +    +F+ M   G A D+ TY
Sbjct: 104 KDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTY 163

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              I  LC+   I +A  +    ++   + ++  Y  L    CK+GRLK A E+F ++P 
Sbjct: 164 HLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS 223

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
               P+ + YN +I G C     D A +   +M E   APDV T+++LI G  + ++  K
Sbjct: 224 ----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK 279

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +E+LH+M ++ V PD    + ++D L K
Sbjct: 280 ASEMLHEMVDRGVTPDTVTFNSIMDGLCK 308


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 171/494 (34%), Positives = 271/494 (54%), Gaps = 54/494 (10%)

Query: 33  RDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------R 86
           R  TT+   +N+   +EA  +F  M++  P P  V  F+ LL+++AK+K+YD        
Sbjct: 39  RAFTTKRLSMNL---DEAIDLFCNMIQSRPLPSIVE-FSKLLSNIAKSKNYDLVISLFHN 94

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  +LYTYNI+INC C+                                    SR
Sbjct: 95  MEICGIGHDLYTYNIVINCLCRC-----------------------------------SR 119

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            + A ++  K+  FG EP+V+T ++LING C+      A++L  +M        + CK +
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE------MRCKLD 173

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+TIIDG CK G V+ A  LF +M+ + +  D VTYNSL+ GLC +   ++A RL  
Sbjct: 174 VVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMR 233

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ + + P+V+TF  +++   +  K  EA +  + M++R + P+  TYN+++ G C+ G
Sbjct: 234 DMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHG 293

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A+++   M + GC  D V+YN LING+CK K V+E   L REM  +G+    VT+N
Sbjct: 294 QVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFN 353

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  G F+  + + A ++F  M   G   + RTY+  + GLC N  + +A+ LF +++  
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKS 410

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           + ELDI  YN +I G+C  G ++ AW+LFCSL    L P+VVTY  MI G C     DKA
Sbjct: 411 EMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKA 470

Query: 507 RDLFLDMEENAAAP 520
             L+  M+E+   P
Sbjct: 471 DFLYRKMQEDGLLP 484



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 225/437 (51%), Gaps = 9/437 (2%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +++S   P+   F+ L+  +          +LF  ++  G   ++ TYN +IN LCR
Sbjct: 57  FCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCR 116

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               +IAL++  +M     E      P+ VT S++I+G C+   V  A  L  +M++   
Sbjct: 117 CSRFVIALSVVGKMMKFGYE------PDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             DVV YN++I G C     N A  LF  M   GV+   VT+N ++  LC + +  +A+R
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+  MV R + PN  T+  L++ F   GK   A++ +  M       D  +YN +I+G C
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            + +V+EA  +   MV+KG  P VVTYNTL  G  +  +V+   KL  EM + G+  DT 
Sbjct: 291 MHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTV 350

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+ T I G  + G    A E+F  +       +I+ Y+ L+ GLC + R++ A  LF S+
Sbjct: 351 TFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESM 407

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  ++ TYNI+I G+C  G ++ A DLF  +      PDV+T+  +I GF R    
Sbjct: 408 QKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLW 467

Query: 539 SKVNELLHKMKEKKVMP 555
            K + L  KM+E  ++P
Sbjct: 468 DKADFLYRKMQEDGLLP 484



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 214/439 (48%), Gaps = 13/439 (2%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNT 207
           EA  LF  +      P+++ ++ L++ + ++ +  + ++LF  M   G G        + 
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGH-------DL 104

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+ +I+ LC+      A ++  +M      PDVVT +SLI+G C  N    A  L  +
Sbjct: 105 YTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSK 164

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M +   +  VV +N I+D  CK   ++ A  L   M + GVR +  TYN+L+ G C  G+
Sbjct: 165 MEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGR 224

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + A  L   M       + +++  LIN + +  +  EA   Y EM+ + I P V TYN+
Sbjct: 225 RSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNS 284

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  GL    QV+ A ++ D M   G   D  TY T I+G CK   + E  +L R +    
Sbjct: 285 MIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG 344

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
             +D   +N +I G  ++GR   A E+F  +      PN+ TY+I++ GLC + +++KA 
Sbjct: 345 LVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKAL 401

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF  M+++    D+ T++++IHG   I       +L   +  K + PD    + ++   
Sbjct: 402 VLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGF 461

Query: 568 VKNEISLKSLPSFLVQERQ 586
            +  +  K+   FL ++ Q
Sbjct: 462 CRKRLWDKA--DFLYRKMQ 478



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 180/359 (50%), Gaps = 5/359 (1%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A  LF  M      P +V ++ L+  +  + +++    LF  M   G+   + T+N+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC+  +   A  ++  M++ G  P+  T ++L++GFC   ++  A +L   ME M 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK D V YN +I+G+CK   V  AL L+  M   G++   VTYN+L  GL    +   A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC-ELDIQAYNCLIDG 461
           +L  +M    +  +  T+T  I+   + G  +EA + +  + I +C + D+  YN +I G
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM-IRRCIDPDVFTYNSMIHG 288

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC  G++  A ++   +      P+VVTYN +I G C   ++D+   L  +M +     D
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            +TF+ +I G+ +   P    E+  +M  +   P+    SI++  L  N    K+L  F
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLF 404



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 70/153 (45%)

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EA++LF  +   +    I  ++ L+  + KS        LF ++    +  ++ TYNI+I
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             LC   +   A  +   M +    PDV+T   LI+GF + N      +L+ KM+E +  
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            D  I + ++D   K  +   +L  F   ER G
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDG 204


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 181/513 (35%), Positives = 274/513 (53%), Gaps = 37/513 (7%)

Query: 57  MLRMHPSP-PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKI 109
           ML  H +P P +  F  +L SL K  HY        ++   GL  NL T +ILINC+ ++
Sbjct: 1   MLLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQL 60

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G+ +L F  F  IL+  +  +A TF +LIKGL  +  I +A     K+ A G + N ++Y
Sbjct: 61  GQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSY 120

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
            TLINGLC+ G T  AL     +       G + +P+ V Y+TIIDGLCK+  V+ A  L
Sbjct: 121 GTLINGLCKVGQTRAALEFLRRID------GKLVQPDVVMYNTIIDGLCKDKLVNDAFNL 174

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           + +M  + I P VVTYN+LI GLC      +A  L  +M+ + + P+V TF++++D  CK
Sbjct: 175 YFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCK 234

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             KM EA  +  +M++  V+PN  TYN+LMDG  L+  + +A+ +F +M  M        
Sbjct: 235 EGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKM-------- 286

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
                        V+EA++L+ EM  K I P +V YN+L  GL +  +  +ALK   EM 
Sbjct: 287 -------------VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMH 333

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   D  TY + +D LCKN ++ +A+EL   L+    +  +  YN LI+GLCKSGRLK
Sbjct: 334 YRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLK 393

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A ++F  L       +V TYN MI+G C  G  D+   +   M+++  +PD    +++I
Sbjct: 394 DAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIII 453

Query: 530 HGFIRINE---PSKVNELLHKMKEKKVMPDASI 559
                  E     K  E++ + K  +  P ++I
Sbjct: 454 RSLFDKGENDKAGKFREMIVRGKCHREAPASTI 486



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 226/452 (50%), Gaps = 22/452 (4%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           TP+   F  ++  L   +      +L  +++  G   N++T + LIN   + G   ++ +
Sbjct: 9   TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFS 68

Query: 188 LFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +F   +  G G        + +T++T+I GLC +G + KA     ++  +    + V+Y 
Sbjct: 69  VFANILKKGYGS-------DAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LI+GLC       A      +  + VQP VV +N I+D LCK++ +++A  L   MV +
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            + P+  TYNTL+ G C+M ++  A  L   M          +++ILI+ +CK  +++EA
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLG------------LFE--IHQVEHALKLFDEMQRDG 412
            +++  M+ + +KP +VTYN+L  G            +F   I  V+ A+ LF+EM    
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D   Y + IDGLCK+G    A++    +       DI  YN L+D LCK+  +  A 
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAI 361

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           EL   L    + P+V TYNI+I GLC  G++  A  +F D+       DV T++ +I GF
Sbjct: 362 ELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGF 421

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            +     +   ++ KMK+    PDA    I++
Sbjct: 422 CKKGLFDETLAMVSKMKDSGCSPDAKNCEIII 453



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 184/380 (48%), Gaps = 14/380 (3%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+   +  I+  L K        +L  QM+   +  ++VT + LI+          +  +
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  ++ +G     +TF  ++  LC   ++ +A    D +V +G + N  +Y TL++G C 
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+   A E    ++    + D V YN +I+G CK+K V +A +LY EMV+K I P+VVT
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNTL  GL  + Q++ A+ L  +M  + +     T++  ID  CK G + EA  +F  + 
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249

Query: 445 ILKCELDIQAYNCLIDG-----LCKSGRLKF---------AWELFCSLPHGVLVPNVVTY 490
               + +I  YN L+DG     + K  +  F         A  LF  +    + P++V Y
Sbjct: 250 KEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIY 309

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +I GLC  G+   A     +M      PD+ T++ L+    +     K  ELL K+K+
Sbjct: 310 NSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKD 369

Query: 551 KKVMPDASIVSIVVDLLVKN 570
           + + P     +I+++ L K+
Sbjct: 370 QGIQPSVCTYNILINGLCKS 389



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 29/153 (18%), Positives = 69/153 (45%)

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           +   +  L K  +    V L R +       ++   + LI+   + G+   ++ +F ++ 
Sbjct: 15  FGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANIL 74

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                 + +T+  +I+GLC  G++ KA      +       + +++  LI+G  ++ +  
Sbjct: 75  KKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTR 134

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
              E L ++  K V PD  + + ++D L K+++
Sbjct: 135 AALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKL 167


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 178/548 (32%), Positives = 283/548 (51%), Gaps = 49/548 (8%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  ++ N L+ +LA++++Y        R+    + P+  + + LI CF    +  LGF  
Sbjct: 72  PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G +L+  FT N    N ++KGL     + EA  L  ++      P++++YNTLINGLC+
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A+ L  EM          C PN+VT +T++DGLCK+G +D+A  L   MK +  
Sbjct: 192 AKKLKEAVGLLLEMEAAG------CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF 245

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + DVV Y +LI G C+  + +  K LF EM+ +G+  +VVT++ ++  LC+  +  EA+ 
Sbjct: 246 DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANT 305

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L+ M + G+ P+  TY  L+DG C  G+   A +L   M   G +  +V+YN+L++G C
Sbjct: 306 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 365

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAAD 416
           K   V +A  + R M+ KG K  VVTYNTL  GL +  +V+ ALKLF+ M    + +  +
Sbjct: 366 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 425

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFR-----------------------------TLRILK 447
             T+   I GLCK G + +AV++ R                              + + K
Sbjct: 426 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 485

Query: 448 CELDIQ------AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             LD+        Y+ LIDG CK   L  A  LFC +    L P +  YN ++  LC +G
Sbjct: 486 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +++A+ LF +M      PD+I+F+ +I G ++  +   V EL  KM E  + PDA   S
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605

Query: 562 IVVDLLVK 569
            +++ L K
Sbjct: 606 TLINRLSK 613



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/452 (31%), Positives = 238/452 (52%), Gaps = 31/452 (6%)

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN---------- 194
           S+  EA +LF     F   P+  T N L++ L R+ +  +A +++  M +          
Sbjct: 53  SQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSL 112

Query: 195 ---------------GNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
                          G G +G+V K     N    + ++ GLC+ G V +A  L  +M  
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           ++++PD+V+YN+LI+GLC A    EA  L +EM   G  P+ VT   +MD LCK+ +MDE
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  LL+ M ++G   +   Y TL+ GFC  G ++R +ELF  M   G   + V+Y+ L++
Sbjct: 233 AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 292

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G C+  + +EA ++   M   GI P VVTY  L  GL +  +  HA+ L + M   G   
Sbjct: 293 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
              TY   + GLCK G +I+A ++ R +     + D+  YN L+ GLC  G++  A +LF
Sbjct: 353 SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 412

Query: 476 CSL--PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            S+      L PNV T+N++I GLC +G++ KA  +   M +  +  +++T++ML+ G +
Sbjct: 413 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 472

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +  +  +  EL  ++ +   +P++   SI++D
Sbjct: 473 KAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 161/323 (49%), Gaps = 2/323 (0%)

Query: 249 IHGLCHA--NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +  LC    + + EA  LF   +D  + PS  T N ++D L ++R    A  +   M   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            V P+  + + L++ F    K      + G +   G   +    NI++ G C+N  V EA
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + L REM  K + P +V+YNTL  GL +  +++ A+ L  EM+  G   ++ T TT +DG
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK+G + EA+EL   ++    + D+  Y  LI G C +G L    ELF  +    +  N
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTY+ ++ GLC  GQ  +A  +   M E+   PDV+T+  LI G  +    +   +LL+
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            M EK   P     ++++  L K
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCK 366



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 178/367 (48%), Gaps = 24/367 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL--------NATGLFPNLYTYN 100
           +AF I   M+        V ++N L+  L      D  L        N   L PN++T+N
Sbjct: 372 DAFKILRMMIE-KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 430

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +LI   CK GR++       ++++     N  T+N L+ G     +I EA  L+ ++   
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 490

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  PN  TY+ LI+G C+     IA  LF EM            P    Y+T++  LCKE
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG------LNPALFDYNTLMASLCKE 544

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++AK+LF +M + N  PD++++N++I G   A D+   K L ++M++ G++P  +TF
Sbjct: 545 GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 604

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + +++ L K  ++DEA   L+ MV  G  P+A  Y++L+ G    G       L   M +
Sbjct: 605 STLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAA 664

Query: 341 MGCKHDDVSYNILINGYC---KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            G   D    + ++   C   +  +V E L  + +  S+G     ++ N L   L ++HQ
Sbjct: 665 KGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGAS---ISCNEL---LMQLHQ 718

Query: 398 VEHALKL 404
               L+L
Sbjct: 719 SHPKLQL 725


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 169/501 (33%), Positives = 263/501 (52%), Gaps = 12/501 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+ +L K+            +   G  PN+ TYN LIN FCK+G +    + 
Sbjct: 234 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 293

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++L +  +P+  T+N LI G   + R  + A L  ++  +GCEPN ITYNTL++ L +
Sbjct: 294 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 353

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G  + A NL + M   +      CKP+  T++ +ID  CK G +D A  LF  M D   
Sbjct: 354 SGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ TYN +I G C AN  ++A++L   M + G  P VVT+N I+  LCK  ++DEA  
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + +++   G   +  T +TL+DG C   +++ AE+L   ME  G   D V+Y ILI+G+C
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +++++L+ + EM+ KG  PTV+TY+ +   L +  +V     L   M   GV  D  
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            YT+ IDGLCK+    EA EL++ ++   C   +  YN L+D LCK  RL  A  L   +
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM 647

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                +P+ VTYN +  G     + DKA  LF  M+    +P    + +L+   +   + 
Sbjct: 648 ESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKM 707

Query: 539 SKVNELLHKMKEKKVMPDASI 559
            +  E+  +  E     D  I
Sbjct: 708 DQAMEIWEEALEAGADVDPEI 728



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 169/505 (33%), Positives = 264/505 (52%), Gaps = 13/505 (2%)

Query: 71  NILLASLAKNKH----YDTRLN-ATGL-FPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           N LL++  + K     YD   N   GL  P+  TY+ LIN FCK       +     + +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P+ A +N++IKGL    R+  A   +  ++   C P+VITY  L++ LC++     
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISD 254

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A  + E+M      I   C PN VTY+T+I+G CK G +D+A  LF QM + + +PDV T
Sbjct: 255 ASLILEDM------IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN LI G C      +  +L  EM+  G +P+ +T+N +MD L K+ K  +A  L  +M+
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +R  +P+  T+N ++D FC +G+++ A ELF  M   GC  D  +YNI+I+G C+   ++
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L   M   G  P VVTYN++  GL +  QV+ A ++++ ++  G   D  T +T I
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           DGLCK+  + +A +L R +       D+ AY  LI G CK+ +L  +   F  +     V
Sbjct: 489 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 548

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P V+TY+I+I  LC   ++     L   M E    PD I +  +I G  + +   +  EL
Sbjct: 549 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYEL 608

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVK 569
              MK+    P     +++VD L K
Sbjct: 609 YKLMKQTGCAPTVVTYNVLVDKLCK 633



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 265/529 (50%), Gaps = 13/529 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +++ L+    K + +         +   G+ P+   YN +I   C  GRV    + 
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  + R+C  P+  T+  L+  L   +RI +A+ +   +   GC PNV+TYNTLING C+
Sbjct: 225 YRDMQRNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A+ LF +M   +      C P+  TY+ +IDG CK+        L  +M     
Sbjct: 284 LGNMDEAVVLFNQMLENS------CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ +TYN+L+  L  +  + +A  L   M+ +  +PS  TFN+++D  CK  ++D A  
Sbjct: 338 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L  LM  RG  P+  TYN ++ G C   +I+ A +L   M   GC  D V+YN +++G C
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V+EA  +Y  + + G    VVT +TL  GL +  +++ A KL  EM+R+G A D  
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            YT  I G CK   + +++  F  +    C   +  Y+ +ID LCKS R++    L  ++
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P+ + Y  +I GLC     D+A +L+  M++   AP V+T+++L+    +++  
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL 637

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +   LL  M+    +PD    + V D   K+    K+   F   + +G
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 206/424 (48%), Gaps = 74/424 (17%)

Query: 221 GFVDKAKA-----LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV-- 273
            FV K KA     LF   +    +PD +TY++LI+G C A D+ +A RL  EM  +G+  
Sbjct: 141 AFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVP 200

Query: 274 --------------------------------QPSVVTFNVIMDELCKNRKMDEASRLLD 301
                                            PSV+T+ +++D LCK+ ++ +AS +L+
Sbjct: 201 HNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILE 260

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M++ G  PN  TYNTL++GFC +G ++ A  LF  M    C  D  +YNILI+GYCK +
Sbjct: 261 DMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE 320

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLF---------------------------- 393
             ++   L +EMV  G +P  +TYNTL   L                             
Sbjct: 321 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 380

Query: 394 -------EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
                  ++ Q++ A +LF  M   G   D  TY   I G C+   I +A +L   +   
Sbjct: 381 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 440

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  D+  YN ++ GLCK+ ++  A+E++  L +G    +VVT + +I GLC   ++D A
Sbjct: 441 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +ME N +APDV+ + +LIHGF + ++  K      +M +K  +P     SIV+D 
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 560

Query: 567 LVKN 570
           L K+
Sbjct: 561 LCKS 564



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 2/278 (0%)

Query: 293 MDEASRLLDLMV-QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +D+A +  D    Q G + +  T N L+  F    K   A +LF +     C  D ++Y+
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LING+CK ++ ++A  L  EM  +GI P    YNT+  GL +  +V+ AL  + +MQR+
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN 231

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
             A    TYT  +D LCK+  I +A  +   +    C  ++  YN LI+G CK G +  A
Sbjct: 232 -CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             LF  +      P+V TYNI+I G C   +      L  +M +    P+ IT++ L+  
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++  +      L   M  +   P     ++++D+  K
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 164/476 (34%), Positives = 256/476 (53%), Gaps = 8/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++ TY+ +I+  CK G+V+        +      P+ AT+  ++  L    ++ EA
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF K+   GC  N + YN LINGLC+  +   A  L EEMA+   E      P+ +TY
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYE------PDNITY 118

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF--IEM 268
           +TI+ GLC+ G V +AK  F  M     +PDVV YN L+  L       EA  LF  ++M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            D+ V P ++T+N ++D  C+  K DEA +L   ++ +G  P+  TYN+++ G      +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + AEE+F  M   GC  +  +Y+I+++G+C+   +   L LY EM  K   P V+  N +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +  +V+ A K+ +EM + G   D  TY   +DGLCK   + +A ELF T+    C
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             DI +Y+ +++GLCK+ ++  A  LF  +    LVP+VVT+NI++ GLC  G++D+A+D
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           L   M E+   PD +T   L+HG  R     +   L   M EK  + D    +IV+
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 165/519 (31%), Positives = 279/519 (53%), Gaps = 17/519 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  +F  M+    S   V+ +N L+  L K+++ +        + + G  P+  TYN 
Sbjct: 62  DEADELFHKMIERGCSANTVA-YNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++  C++G+VS     F  +    ++P+   +N L+  L+ E ++ EA  LF  +    
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 162 --CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
               P++ITYNTLI+G CR   T  A+ LF+++      I     P+TVTY++I+ GL +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDV------IAKGYMPDTVTYNSILLGLAR 234

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +  +D+A+ +F +M D    P+  TY+ ++ G C   +      L+ EM ++   P V+ 
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL 294

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
            N ++D LCK +K+D+A ++L+ M + G  P+  TYN L+DG C    +++A ELF +M 
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC  D VSY++++NG CK  +V +A  L+  M+ + + P VVT+N L  GL +  +++
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 414

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A  L D M    V  D  T TT + GLC++    EAV LF+ +       D+  +N ++
Sbjct: 415 EAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474

Query: 460 DGLCKSGRLKFAWELFCSL--PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            GLC+ G+L  A   F S+    G   P+VVTY  ++  L   G++D+A D F  M  + 
Sbjct: 475 AGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSG 534

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            APD + ++ L++G  +     + + L   MKEK  + D
Sbjct: 535 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 266/515 (51%), Gaps = 16/515 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ +++ L K       L         G+ P++ TY I+++  C+ G+V      
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++    + N   +N+LI GL  +  I  A  L  ++ + G EP+ ITYNT+++GLCR
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF--LQMKDE 236
            G    A   F+ M +          P+ V Y+ ++D L KEG V +A  LF  + M D 
Sbjct: 128 MGKVSEAKQFFDSMPSRG------YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADR 181

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + PD++TYN+LI G C     +EA +LF +++ +G  P  VT+N I+  L +   MDEA
Sbjct: 182 KVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 241

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +   MV  G  PN  TY+ ++ G C +G + R  EL+  M       D +  N +I+ 
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK K+V++A  +  EM   G  P VVTYN L  GL + + V+ A +LF  M  +G A D
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             +Y+  ++GLCK   + +A  LF  +   K   D+  +N L+DGLCK+G+L  A +L  
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    ++P+ VT   ++ GLC D + D+A  LF  M E     DV+  ++++ G  R  
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREG 481

Query: 537 EPSKVNELLHKM--KEKKVMPDASIVSIVVDLLVK 569
           + ++       M   + +  PD    + +V+ L++
Sbjct: 482 KLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIE 516



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 206/409 (50%), Gaps = 72/409 (17%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M ++   PDVVTY+++I GLC      EA  +  EM ++GV P V T+ +I+D LC+  K
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 293 MDEAS-----------------------------------RLLDLMVQRGVRPNACTYNT 317
           +DEA                                    +LL+ M  +G  P+  TYNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDV----------------------------- 348
           ++ G C MGK++ A++ F SM S G   D V                             
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 349 --------SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
                   +YN LI+G+C+ ++ +EA+ L++++++KG  P  VTYN++ LGL     ++ 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A ++F +M   G A +  TY+  + G C+ G +   +EL+  +   +   D+   N +ID
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            LCK+ ++  A ++   +     VP+VVTYNI++ GLC    +DKA +LF  M +N  AP
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           D++++ ++++G  + N+      L  +M E+K++PD    +I++D L K
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 169/516 (32%), Positives = 280/516 (54%), Gaps = 24/516 (4%)

Query: 69  SFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLGFIAF 119
           S+N LL  L + K +     A  LF         P++ +YNI+I+ FC  G +       
Sbjct: 79  SWNSLLQVLVRCKKHR---EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELL 135

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +  + F P+A T   +I  + A +  ++ A     L++ GC+PNV+TY  LI    R 
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNVVTYTALIAAFARA 192

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A+ L EEM          C PN VTY+ ++D LCK   V  A+ +  +M +    
Sbjct: 193 KKLEEAMKLLEEMRERG------CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA 246

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+V+T+NSL+ G C   + ++A++L   M+ +G++P+VVT++ ++D LCK++K  EA  +
Sbjct: 247 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L+ M  RGV P+A TY+ L+ G C   KI  AE++   M   GC  D V Y+ +I+ +CK
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTR 418
           + ++ EA    +EM  +   P VVTYNT+  GL ++ ++  A  + ++MQ  G V  D  
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY+T I+GLCK+  ++EA +L   +    C  D+  Y  +IDGLCK GRL+ A  L   +
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PNVVTY  +I GLC   ++D+A  +  +M      P+++T++ +++G       
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546

Query: 539 SKVNELLHKMKEKKV--MPDASIVSIVVDLLVKNEI 572
            +  +L+ +MK+ +    PDA+    +V+ L+ +++
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDL 582



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 158/494 (31%), Positives = 262/494 (53%), Gaps = 18/494 (3%)

Query: 65  PPVSSFNILLASL--AKNKHYDTRL----NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+NI+++    A + H    L     + G  P+ +T+  +I      G +  G + 
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD-GAMD 168

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R +  C  PN  T+ +LI       ++ EA  L  +++  GC PN++TYN L++ LC+
Sbjct: 169 HLRSM-GC-DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++ ++M  G         PN +T+++++DG CK G VD A+ L   M  + +
Sbjct: 227 LSMVGAAQDVVKKMIEGG------FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM 280

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTY++LI GLC +  + EAK +  EM  +GV P   T++ ++  LCK  K++EA +
Sbjct: 281 RPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQ 340

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  M   G  P+   Y++++  FC  GK+  A++    M       D V+YN +I+G C
Sbjct: 341 MLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC 400

Query: 359 KNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           K  ++ EA  +  +M   G + P VVTY+T+  GL +   +  A KL D M + G   D 
Sbjct: 401 KLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDV 460

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYTT IDGLCK G + EA  L + ++   C  ++  Y  LI GLCK+ ++  A  +   
Sbjct: 461 VTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 520

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA--APDVITFDMLIHGFIRI 535
           + +    PN+VTYN M+ GLC  G++ +A+ L   M++  A  +PD  T+  +++  +  
Sbjct: 521 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 580

Query: 536 NEPSKVNELLHKMK 549
           +   +  +LL +MK
Sbjct: 581 DLVQEAEQLLEQMK 594



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 241/463 (52%), Gaps = 10/463 (2%)

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           K  +++L F  +       F+  A ++NSL++ L    +  EA  LF       CEP+V 
Sbjct: 54  KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +YN +I+G C  G    AL L EEM +          P+  T++ II  +   G +D A 
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAG------FAPDAFTHTPIITAMANAGDLDGA- 166

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
                ++    +P+VVTY +LI     A    EA +L  EM ++G  P++VT+NV++D L
Sbjct: 167 --MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 224

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK   +  A  ++  M++ G  PN  T+N+L+DGFC  G ++ A +L G M + G + + 
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 284

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y+ LI+G CK+++  EA  +  EM ++G+ P   TY+ L  GL +  ++E A ++   
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G   D   Y++ I   CK+G ++EA +  + +R  +   D+  YN +IDGLCK G+
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404

Query: 468 LKFAWELFCSLPH-GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +  A  +   +   G ++P+VVTY+ +I GLC    + +A+ L   M +    PDV+T+ 
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 464

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +I G  +     +   LL  MK     P+    + ++  L K
Sbjct: 465 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 507



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/456 (32%), Positives = 234/456 (51%), Gaps = 31/456 (6%)

Query: 12  SFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPN-------------EAFCIFDYML 58
           +F   PI    +N   L      L +   D NV+T               EA  + + M 
Sbjct: 147 AFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM- 205

Query: 59  RMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRV 112
           R    PP + ++N+L+ +L K       +    ++   G  PN+ T+N L++ FCK G V
Sbjct: 206 RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNV 265

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                  G ++     PN  T+++LI GL    + +EA  +  ++K  G  P+  TY+ L
Sbjct: 266 DDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSAL 325

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+GLC+      A  +   MA G+G     C P+ V YS+II   CK G + +A+    +
Sbjct: 326 IHGLCKADKIEEAEQMLRRMA-GSG-----CTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 379

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNR 291
           M+ +  +PDVVTYN++I GLC      EA+ +  +M + G V P VVT++ +++ LCK+ 
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            + EA +LLD M + G  P+  TY T++DG C  G++  AE L   M+  GC  + V+Y 
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+G CK ++V+EA  +  EM + G  P +VTYNT+  GL    +++ A +L   M +D
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KD 558

Query: 412 GVA---ADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           G A    D  TY T ++ L  +  + EA +L   ++
Sbjct: 559 GRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 172/319 (53%), Gaps = 13/319 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L+  L K++ +         +   G+ P+ +TY+ LI+  CK  ++      
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+  S  TP+   ++S+I       +++EA     +++     P+V+TYNT+I+GLC+
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  + E+M   +G++     P+ VTYST+I+GLCK   + +A+ L  +M     
Sbjct: 402 LGKIAEAQVILEQMQE-SGDV----LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NPDVVTY ++I GLC      EA+ L   M   G  P+VVT+  ++  LCK RK+DEA R
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES--MGCKHDDVSYNILING 356
           +++ M   G  PN  TYNT+++G C+ G+I  A++L   M+     C  D  +Y  ++N 
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNA 576

Query: 357 YCKNKEVEEALSLYREMVS 375
              +  V+EA  L  +M S
Sbjct: 577 LMSSDLVQEAEQLLEQMKS 595



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 3/235 (1%)

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G  H   S+N L+    + K+  EA  L+R  +    +P V +YN +  G      +  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L+L +EM+  G A D  T+T  I  +   G +  A++    LR + C+ ++  Y  LI  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAA 188

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             ++ +L+ A +L   +      PN+VTYN+++  LC    +  A+D+   M E   AP+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           V+TF+ L+ GF +        +LL  M  K + P+    S ++D L K++  L++
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 303


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 160/485 (32%), Positives = 262/485 (54%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++A GL P+ YTY  L+N  C  GR       F  ++R    PN A +  LI G   +  
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E   L   +   G  P+   +N +     +      A+++F +M            P+
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG------LSPD 412

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y  +ID LCK G VD A   F QM +E + P++  +NSL++GLC  + W +AK  + 
Sbjct: 413 VVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM++QG++P VV FN I+  LC   ++ +A RL+DLM + G RP   +Y TL+ G CL+G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVG 532

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I+ A +    M S+G K D+ +YN L++GYC+   +++A  ++REM+  GI P VVTY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF   +   A +L+  M   G   +   Y   ++GL KN  + EA +LF++L   
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +L+I  +N +I  L KSGR + A  LF ++    LVP+V TY ++ + L  +G +++ 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            DLF  ME++   P+    + L+   +   + ++    L K+ EK    +AS  ++++ L
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISL 772

Query: 567 LVKNE 571
           L ++E
Sbjct: 773 LSRDE 777



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 175/524 (33%), Positives = 271/524 (51%), Gaps = 27/524 (5%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNL 96
            R G + +   ++A  +FD +L  H  P  V +FN LL ++++     +    + L  +L
Sbjct: 23  ARSGSLGL---DDALKLFDGLL-THARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSL 78

Query: 97  Y----------------TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           +                TY+ILI CFC++GR+  GF  FG IL+S +  N    N L+KG
Sbjct: 79  FNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKG 138

Query: 141 LHAESRIMEAAALFTK-LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           L    R+ EA  +  K +   GC P+V++YNTL+ G C       AL L   MA+  G  
Sbjct: 139 LCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR- 197

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
              C PN V+Y+ +I+G   EG VDKA  LFL+M D  I P+VVTY ++I GLC A   +
Sbjct: 198 --SCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVD 255

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A+ +F +M+D+GV+P   T+N ++       K  E  R+L+ M   G++P+  TY +L+
Sbjct: 256 RAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           +  C  G+   A  LF SM   G K +   Y ILI+GY     + E   L   MV  G+ 
Sbjct: 316 NYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS 375

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P    +N +F    +   ++ A+ +F++M++ G++ D   Y   ID LCK G + +AV  
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  +       +I  +N L+ GLC   + + A E +  + +  + P+VV +N ++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI---RINEPSK 540
            GQ+ KA+ L   ME     P VI++  LI G     RI+E +K
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAK 539



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 204/433 (47%), Gaps = 20/433 (4%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCK 219
           P+  TY+ LI   CR G           + +G    G++ K     N +  + ++ GLC 
Sbjct: 92  PDPCTYSILIGCFCRMG----------RLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141

Query: 220 EGFVDKAKALFLQ-MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQ--P 275
              + +A  + ++ M +    PDVV+YN+L+ G C+     EA  L   M D QG    P
Sbjct: 142 AKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VV++ ++++      ++D+A  L   M+ RG++PN  TY T++DG C    ++RAE +F
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M   G K D+ +YN LI+GY    + +E + +  EM + G+KP   TY +L   L   
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +   A  LFD M R G+  +   Y   I G    G + E  +L   +       D   +
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +     K   +  A  +F  +    L P+VV Y  +I  LC  G++D A   F  M  
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV-SIVVDLLVKNEISL 574
              AP++  F+ L++G   +++  K  E   +M  + + PD     +I+ +L  K ++ +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV-M 500

Query: 575 KSLPSFLVQERQG 587
           K+     + ER G
Sbjct: 501 KAQRLIDLMERVG 513



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 13/352 (3%)

Query: 228 ALFLQMKDE---NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +LF +M  E    + PD  TY+ LI   C           F  ++  G + + +  N ++
Sbjct: 77  SLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136

Query: 285 DELCKNRKMDEASRLLDLMVQR----GVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
             LC  +++ EA   +D++V+R    G  P+  +YNTL+ GFC   +   A EL   M  
Sbjct: 137 KGLCDAKRLCEA---MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 339 -ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            +   C  + VSY I+ING+    +V++A +L+ EM+ +GI+P VVTY T+  GL +   
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V+ A  +F +M   GV  D  TY   I G    G   E V +   +     + D   Y  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L++ LC +GR + A  LF S+    + PNV  Y I+I G    G + +  DL   M EN 
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +PD   F+++   + +     +   + +KMK++ + PD      ++D L K
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCK 425



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 180/417 (43%), Gaps = 35/417 (8%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    FNI+  + AK        H   ++   GL P++  Y  LI+  CK+GRV    + 
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN   FNSL+ GL    +  +A   + ++   G  P+V+ +NT++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 179 TGHTMIALNLFEEMANGNGEIGVVC-----------------------------KPNTVT 209
            G  M A  L + M       GV+                              KP+  T
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ G C+ G +D A  +F +M    I P VVTY++++HGL     ++EAK L++ M+
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G Q ++  +N+I++ L KN  +DEA +L   +  +  +    T+N ++      G+  
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF ++ S G   D  +Y ++     +   +EE   L+  M   G  P     N L 
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
             L     +  A     ++     + +  T    I  L ++ Y   A  L    R+L
Sbjct: 736 RRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 156/319 (48%), Gaps = 4/319 (1%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P   T+++++   C+  +++       L+++ G R N    N L+ G C   ++  A 
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 333 E-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGIKPTVVTYNTL 388
           + L   M  +GC  D VSYN L+ G+C  K  EEAL L   M     +   P VV+Y  +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G F   QV+ A  LF EM   G+  +  TYTT IDGLCK   +  A  +F+ +     
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D   YNCLI G    G+ K    +   +    L P+  TY  ++  LCN+G+  +AR 
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  M      P+V  + +LIHG+      S++++LL+ M E  + PD  I +I+     
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 569 KNEISLKSLPSFLVQERQG 587
           K  +  +++  F   ++QG
Sbjct: 390 KKAMIDEAMHIFNKMKQQG 408


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 161/474 (33%), Positives = 262/474 (55%), Gaps = 48/474 (10%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYT 98
           I  ++A  +F  M +  P P  +  F+ LL+++AK   +D       ++   G+  NLYT
Sbjct: 57  IELDDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115

Query: 99  YNILINCFC----------------KIG-------------------RVSLGFIAFGRIL 123
           YNILINCFC                K+G                   R+S       +++
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
              + P+  TF +LI GL   ++  EA AL  ++   GC+P+++TY  ++NGLC+ G T 
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +ALNL  +M     E       N V YST+ID LCK    D A  LF +M+++ + P+V+
Sbjct: 236 LALNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY+SLI  LC+   W++A RL  +M+++ + P++VTF+ ++D   K  K+ +A +L + M
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           ++R + PN  TY++L++GFC++ ++  A+++   M    C  + V+YN LING+CK K V
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++ + L+REM  +G+    VTY TL  G F+    ++A  +F +M   GV  +  TY   
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
           +DGLCKNG + +A+ +F  L+    E DI  YN +I+G+CK+G+ K     F +
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 226/438 (51%), Gaps = 6/438 (1%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  LF  +      P++I ++ L++ + +     + ++  E+M      +G+    N  
Sbjct: 61  DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLY 114

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +I+  C+   +  A AL  +M      PD+VT NSL++G CH N  ++A  L  +M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           ++ G +P  VTF  ++  L  + K  EA  L+D MVQRG +P+  TY  +++G C  G  
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  L   ME+   + + V Y+ +I+  CK +  ++AL+L+ EM +KG++P V+TY++L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L    +   A +L  +M    +  +  T++  ID   K G +++A +L+  +     
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + +I  Y+ LI+G C   RL  A ++   +     +PNVVTYN +I G C   ++DK  +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF +M +     + +T+  LIHGF +  +      +  +M    V P+    +I++D L 
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474

Query: 569 KNEISLKSLPSFLVQERQ 586
           KN    K++  F   +R 
Sbjct: 475 KNGKLAKAMVVFEYLQRS 492



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 222/451 (49%), Gaps = 6/451 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG + +S   P+   F+ L+  +   ++     +   K++  G   N+ TYN LIN  CR
Sbjct: 66  FGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCR 125

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +AL L  +M     E      P+ VT +++++G C    +  A AL  QM +   
Sbjct: 126 CSRLSLALALLGKMMKLGYE------PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD VT+ +LIHGL   N  +EA  L   M+ +G QP +VT+  +++ LCK    D A  
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ M    +  N   Y+T++D  C     + A  LF  ME+ G + + ++Y+ LI+  C
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 +A  L  +M+ + I P +VT++ L     +  ++  A KL++EM +  +  +  
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY++ I+G C    + EA ++   +    C  ++  YN LI+G CK+ R+    ELF  +
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               LV N VTY  +I G       D A+ +F  M      P+++T+++L+ G  +  + 
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +K   +   ++   + PD    +I+++ + K
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%)

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           + ++A  LF  M      PS++ F+ ++  + K  K D      + M   G+  N  TYN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L++ FC   +++ A  L G M  +G + D V+ N L+NG+C    + +A++L  +MV  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G KP  VT+ TL  GLF  ++   A+ L D M + G   D  TY   ++GLCK G    A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           + L   +   K E ++  Y+ +ID LCK      A  LF  + +  + PNV+TY+ +I  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LCN G+   A  L  DM E    P+++TF  LI  F++  +  K  +L  +M ++ + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 557 ASIVSIVVD 565
               S +++
Sbjct: 358 IFTYSSLIN 366



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 186/370 (50%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  LF  M      P ++ ++ L+  +   N ++       +M   G+  ++ T+N+
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C+  ++  A  LL  M++ G  P+  T N+L++GFC   +I+ A  L   M  MG
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D V++  LI+G   + +  EA++L   MV +G +P +VTY  +  GL +    + AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++M+   + A+   Y+T ID LCK  +  +A+ LF  +       ++  Y+ LI  L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GR   A  L   +    + PN+VT++ +I      G++ KA  L+ +M + +  P++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            T+  LI+GF  ++   +  ++L  M  K  +P+    + +++   K +   K +  F  
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418

Query: 583 QERQGEVGES 592
             ++G VG +
Sbjct: 419 MSQRGLVGNT 428



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 136/278 (48%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++D+A  L  +M Q    P+   ++ L+     M K +        ME +G  H+  +YN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           ILIN +C+   +  AL+L  +M+  G +P +VT N+L  G    +++  A+ L D+M   
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   DT T+TT I GL  +    EAV L   +    C+ D+  Y  +++GLCK G    A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   +    +  NVV Y+ +I  LC     D A +LF +ME     P+VIT+  LI  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                  S  + LL  M E+K+ P+    S ++D  VK
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 106/226 (46%)

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           E+++A+ L+  M      P+++ ++ L   + ++++ +  +   ++M+  G++ +  TY 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             I+  C+   +  A+ L   +  L  E DI   N L++G C   R+  A  L   +   
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+ VT+  +I GL    +  +A  L   M +    PD++T+  +++G  +  +    
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             LL+KM+  K+  +  I S V+D L K      +L  F   E +G
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 167/486 (34%), Positives = 265/486 (54%), Gaps = 48/486 (9%)

Query: 42  INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPN 95
           I  +  +++  +F +M++  P  P ++ F+ LL++++K K YD       ++   G+  N
Sbjct: 57  IRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L T NIL+NCFC+  ++SL     G++++                               
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIK------------------------------- 144

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
                G EP+++T+ +L+NG CR      AL +F++M      +G+  KPN V Y+TIID
Sbjct: 145 ----LGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM------VGMGYKPNVVIYNTIID 194

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLCK   VD A  L  +M+ + I PDVVTYNSLI GLC +  W++A R+   M  + + P
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            V TFN ++D   K  ++ EA    + M++R + P+  TY+ L+ G C+  +++ AEE+F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
           G M S GC  D V+Y+ILINGYCK+K+VE  + L+ EM  +G+    VTY  L  G    
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            ++  A ++F  M   GV  +  TY   + GLC NG I +A+ +   ++    + DI  Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +I G+CK+G +  AW+++CSL    L+P++ TY  M+ GL   G   +A  LF  M+E
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494

Query: 516 NAAAPD 521
           +   P+
Sbjct: 495 DGILPN 500



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 227/432 (52%), Gaps = 6/432 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ A F+ L+  +    +      L+ +++  G   N+ T N L+N  CR     +AL+ 
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E      P+ VT+ ++++G C+   V  A  +F QM      P+VV YN++
Sbjct: 139 LGKMIKLGHE------PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I GLC +   + A  L   M   G+ P VVT+N ++  LC + +  +A+R++  M +R +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  T+N L+D     G+++ AEE +  M       D V+Y++LI G C    ++EA  
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++  MVSKG  P VVTY+ L  G  +  +VEH +KLF EM + GV  +T TYT  I G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           + G +  A E+FR +       +I  YN L+ GLC +G+++ A  +   +    +  ++V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TYNI+I+G+C  G++  A D++  +      PD+ T+  ++ G  +     + + L  KM
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492

Query: 549 KEKKVMPDASIV 560
           KE  ++P+   V
Sbjct: 493 KEDGILPNECYV 504



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 188/365 (51%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+   +S ++  + K    D    L+ QM+   I  ++ T N L++  C  +  + A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M+  G +PS+VTF  +++  C+  ++ +A  + D MV  G +PN   YNT++DG C 
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             +++ A +L   ME  G   D V+YN LI+G C +    +A  +   M  + I P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +N L     +  +V  A + ++EM R  +  D  TY+  I GLC    + EA E+F  + 
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  D+  Y+ LI+G CKS +++   +LFC +    +V N VTY I+IQG C  G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A ++F  M      P++IT+++L+HG     +  K   +L  M++  +  D    +I++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 565 DLLVK 569
             + K
Sbjct: 439 RGMCK 443



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 167/306 (54%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +++  LF  M+     PS+  F+ ++  + K +K D    L + M   G+  N CT N L
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ FC   +++ A    G M  +G +   V++  L+NG+C+   V +AL ++ +MV  G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           KP VV YNT+  GL +  QV++AL L + M++DG+  D  TY + I GLC +G   +A  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +   +   D+  +N LID   K GR+  A E +  +    L P++VTY+++I GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
              ++D+A ++F  M      PDV+T+ +LI+G+ +  +     +L  +M ++ V+ +  
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 559 IVSIVV 564
             +I++
Sbjct: 363 TYTILI 368



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 148/298 (49%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+D++  L   MVQ    P+   ++ L+     M K +    L+  M+ +G  H+  + N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL+N +C+  ++  ALS   +M+  G +P++VT+ +L  G     +V  AL +FD+M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +   Y T IDGLCK+  +  A++L   +       D+  YN LI GLC SGR   A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +   +    + P+V T+N +I     +G++ +A + + +M   +  PD++T+ +LI+G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
               +   +  E+   M  K   PD    SI+++   K++     +  F    ++G V
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 20/236 (8%)

Query: 354 INGYCKNKEVEEALSLYREMVSKGIK--------------------PTVVTYNTLFLGLF 393
           I G+C ++      S YREM+  GI+                    P++  ++ L   + 
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           ++ + +  + L+++MQ  G+  +  T    ++  C+   +  A+     +  L  E  I 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +  L++G C+  R+  A  +F  +      PNVV YN +I GLC   Q+D A DL   M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           E++   PDV+T++ LI G       S    ++  M ++++ PD    + ++D  VK
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 263/485 (54%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++A GL P+ YTY  L+N  C  GR       F  ++R    PN A +  LI G   +  
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E   L   +   G  P+   +N +     +      A+++F +M            P+
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG------LSPD 412

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V +  +ID LCK G VD A   F QM +E + P++  +NSL++GLC  + W +AK  + 
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM++QG++P VV FN I+  LC   ++ +A RL+DLM + G RP+  +Y TL+ G CL+G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I+ A +    M S+G K D+ +YN L++GYC+   +++A  ++REM+  GI P VVTY+
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF   +   A +L+  M   G   +   Y   ++GL KN  + EA +LF++L   
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +L+I  +N +I  L KSGR + A  LF ++    LVP+V TY ++ + L  +G +++ 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            DLF  ME++   P+    + L+   +   + ++    L K+ EK    +AS  ++++ L
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISL 772

Query: 567 LVKNE 571
           L ++E
Sbjct: 773 LSRDE 777



 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 175/524 (33%), Positives = 272/524 (51%), Gaps = 27/524 (5%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF--- 93
            R G + +   ++A  +FD +L  H  P  + +FN LL ++++     +    + L    
Sbjct: 23  ARSGSLGL---DDALKLFDGLL-THARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSL 78

Query: 94  -------------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
                        P+L TY+ILI CFC++GR+  GF  FG IL+S +  N    N L+KG
Sbjct: 79  FNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKG 138

Query: 141 LHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           L    R+ EA   L  ++   GC P+V++YNTL+ G C       AL L   MA+  G  
Sbjct: 139 LCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR- 197

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
              C PN V+Y+T+I+G   EG VDKA  LFL+M D  I P+VVTY ++I GLC A   +
Sbjct: 198 --SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVD 255

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A+ +F +M+D+GV+P   T+N ++       K  E  R+L+ M   G++P+  TY +L+
Sbjct: 256 RAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           +  C  G+   A   F SM   G K +   Y ILI+GY     + E   L   MV  G+ 
Sbjct: 316 NYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS 375

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P    +N +F    +   ++ A+ +F++M++ G++ D   +   ID LCK G + +AV  
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  +       +I  +N L+ GLC   + + A E +  + +  + P+VV +N ++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI---RINEPSK 540
            GQ+ KA+ L   ME     PDVI++  LI G     RI+E +K
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAK 539



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 203/433 (46%), Gaps = 20/433 (4%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCK 219
           P++ TY+ LI   CR G           + +G    G++ K     N +  + ++ GLC 
Sbjct: 92  PDLCTYSILIGCFCRMG----------RLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141

Query: 220 EGFVDKAKALFLQ-MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQ--P 275
              + +A  + ++ M +    PDVV+YN+L+ G C+     EA  L   M D QG    P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VV++  +++      ++D+A  L   M+ RG++PN  TY T++DG C    ++RAE +F
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M   G K D+ +YN LI+GY    + +E + +  EM + G+KP   TY +L   L   
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +   A   FD M R G+  +   Y   I G    G + E  +L   +       D   +
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +     K   +  A  +F  +    L P+VV +  +I  LC  G++D A   F  M  
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV-SIVVDLLVKNEISL 574
              AP++  F+ L++G   +++  K  E   +M  + + PD     +I+ +L  K ++ +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV-M 500

Query: 575 KSLPSFLVQERQG 587
           K+     + ER G
Sbjct: 501 KAQRLIDLMERVG 513



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 4/319 (1%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P + T+++++   C+  +++       L+++ G R N    N L+ G C   ++  A 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 333 E-LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGIKPTVVTYNTL 388
           + L   M  +GC  D VSYN L+ G+C  K  EEAL L   M     +   P VV+Y T+
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G F   QV+ A  LF EM   G+  +  TYTT IDGLCK   +  A  +F+ +     
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D   YNCLI G    G+ K    +   +    L P+  TY  ++  LCN+G+  +AR 
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
            F  M      P+V  + +LIHG+      S++++LL+ M E  + PD  I +I+     
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 569 KNEISLKSLPSFLVQERQG 587
           K  +  +++  F   ++QG
Sbjct: 390 KKAMIDEAMHIFNKMKQQG 408



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 13/352 (3%)

Query: 228 ALFLQMKDE---NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +LF +M  E    + PD+ TY+ LI   C           F  ++  G + + +  N ++
Sbjct: 77  SLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136

Query: 285 DELCKNRKMDEASRLLDLMVQR----GVRPNACTYNTLMDGFCLMGKINRAEELFGSM-E 339
             LC  +++ EA   +D++++R    G  P+  +YNTL+ GFC   +   A EL   M +
Sbjct: 137 KGLCDAKRLREA---MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193

Query: 340 SMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           S G  C  + VSY  +ING+    +V++A +L+ EM+ +GI+P VVTY T+  GL +   
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V+ A  +F +M   GV  D  TY   I G    G   E V +   +     + D   Y  
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L++ LC +GR + A   F S+    + PNV  Y I+I G    G + +  DL   M EN 
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +PD   F+++   + +     +   + +KMK++ + PD      ++D L K
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK 425



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 182/417 (43%), Gaps = 35/417 (8%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    FNI+  + AK        H   ++   GL P++  +  LI+  CK+GRV    + 
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN   FNSL+ GL    +  +A   + ++   G  P+V+ +NT++  LC 
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCT 495

Query: 179 TGHTMIALNLFEEMA---------------NGNGEIG--------------VVCKPNTVT 209
            G  M A  L + M                 G+  +G              V  KP+  T
Sbjct: 496 KGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ G C+ G +D A  +F +M    I P VVTY++++HGL     ++EAK L++ M+
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G Q ++  +N+I++ L KN  +DEA +L   +  +  +    T+N ++      G+  
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF ++ S G   D  +Y ++     +   +EE   L+  M   G  P     N L 
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
             L     +  A     ++     + +  T    I  L ++ Y   A  L    R+L
Sbjct: 736 RRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/510 (33%), Positives = 277/510 (54%), Gaps = 29/510 (5%)

Query: 11  FSFASAPIS-AFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSS 69
           F+F   PIS +F        + +  ++T     +V   + A  +F+ +L  +P+      
Sbjct: 15  FNFLKIPISISFLILLQKNFIPYSSISTTFHSNDV---DGAVSLFNSLLHQNPTLTAFE- 70

Query: 70  FNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           FN +L SL K+KHY T L+ +      G+ PN  T+NILINCFC++G +   F    +IL
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           +  + P+  T N+ IKG   + +I +A     KL A G   + ++Y TLINGLC+ G T 
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            AL L   +       G + + N V Y+T+IDG+ K+  V+ A  L+ +M  + I+PDVV
Sbjct: 191 AALQLLRRVD------GKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVV 244

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY++LI G        +A  LF +M+ + ++P V TFN+++D  CK  ++ +A  +LD+M
Sbjct: 245 TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM 304

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           + + ++PN  T+NTL+DGFC   K+   + +F  M   G K + V+Y  L++GYC  K+V
Sbjct: 305 MIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 364

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            +A  ++  M  +G+   V +YN +  G  +I +V+ A+KLF EM    +  D  TY + 
Sbjct: 365 NKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL 424

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGLCK+G I  A +L   +       +I  YN +++             L   L    +
Sbjct: 425 IDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGI 472

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            PN+ T  I+I+GLC  G+++ AR +F D+
Sbjct: 473 QPNMHTDTILIKGLCQSGKLEAARKVFEDL 502



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 236/455 (51%), Gaps = 22/455 (4%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G VSL    F  +L    T  A  FN ++  L          +L  +++  G  PN +T+
Sbjct: 51  GAVSL----FNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTF 106

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N LIN  C+ G    A ++  ++     E      P+ +T +T I G C +G + +A   
Sbjct: 107 NILINCFCQLGLIPFAFSVLAKILKMGYE------PDIITLNTFIKGFCLKGQIHQALNF 160

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             ++     + D V+Y +LI+GLC   +   A +L   +  + VQ + V +N ++D + K
Sbjct: 161 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSK 220

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           ++ +++A  L   MV + + P+  TY+ L+ GF ++GK+  A +LF  M     K D  +
Sbjct: 221 DKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYT 280

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +NIL++G+CK   +++A ++   M+ + IKP V T+NTL  G  +  +++    +F  M 
Sbjct: 281 FNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMM 340

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           + G+  +  TY + +DG C    + +A ++F T+       ++ +YN +I+G CK  ++ 
Sbjct: 341 KQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVD 400

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A +LF  + H  ++P+VVTYN +I GLC  G++  A  L  +M +    P++IT++   
Sbjct: 401 KAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYN--- 457

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
                    S +N LL K+K++ + P+    +I++
Sbjct: 458 ---------SILNALLTKLKDQGIQPNMHTDTILI 483



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 201/386 (52%), Gaps = 6/386 (1%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A++LF  + + N  +          ++ I+  L K        +L  QM+ E INP+ VT
Sbjct: 52  AVSLFNSLLHQNPTL------TAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVT 105

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N LI+  C       A  +  +++  G +P ++T N  +   C   ++ +A    D +V
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             G   +  +Y TL++G C +G+   A +L   ++    + + V YN +I+G  K+K V 
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  LY EMV+K I P VVTY+ L  G F + +++ A+ LF++M  + +  D  T+   +
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           DG CK G + +A  +   + I   + ++  +N L+DG CK  ++K    +F  +    + 
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PNVVTY  ++ G C   Q++KA+ +F  M +     +V +++++I+GF +I +  K  +L
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKN 570
             +M  K ++PD    + ++D L K+
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKS 431



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           ++ + N + YS+I         VD A +LF  +  +N       +N ++  L  +  ++ 
Sbjct: 28  ILLQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHT 86

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
              L  +M  +G+ P+ VTFN++++  C+   +  A  +L  +++ G  P+  T NT + 
Sbjct: 87  VLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIK 146

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GFCL G+I++A      + ++G   D VSY  LING CK  E   AL L R +  K ++ 
Sbjct: 147 GFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQL 206

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             V YNT+  G+ +   V  A  L+ EM    ++ D  TY+  I G    G + +A++LF
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLF 266

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             + +   + D+  +N L+DG CK GRLK A  +   +    + PNV T+N ++ G C D
Sbjct: 267 NKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKD 326

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            +M + + +F  M +    P+V+T+  L+ G+  + + +K  ++ + M ++ V  +    
Sbjct: 327 RKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSY 386

Query: 561 SIVVD 565
           +I+++
Sbjct: 387 NIMIN 391



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 219/440 (49%), Gaps = 11/440 (2%)

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           I+F  +L+  F P    ++S+    H+   +  A +LF  L           +N ++  L
Sbjct: 24  ISFLILLQKNFIP----YSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSL 78

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            ++ H    L+L ++M            PN VT++ +I+  C+ G +  A ++  ++   
Sbjct: 79  VKSKHYHTVLSLSQQMEFEG------INPNFVTFNILINCFCQLGLIPFAFSVLAKILKM 132

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD++T N+ I G C     ++A     +++  G     V++  +++ LCK  +   A
Sbjct: 133 GYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 192

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            +LL  +  + V+ NA  YNT++DG      +N A +L+  M +     D V+Y+ LI G
Sbjct: 193 LQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRG 252

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +    ++++A+ L+ +M+ + IKP V T+N L  G  +  +++ A  + D M    +  +
Sbjct: 253 FFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPN 312

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T+ T +DG CK+  + E   +F  +     + ++  Y  L+DG C   ++  A ++F 
Sbjct: 313 VSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFN 372

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           ++    +  NV +YNIMI G C   ++DKA  LF++M      PDV+T++ LI G  +  
Sbjct: 373 TMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSG 432

Query: 537 EPSKVNELLHKMKEKKVMPD 556
           + S   +L+++M ++   P+
Sbjct: 433 KISYAFQLVNEMHDRGQPPN 452



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 180/391 (46%), Gaps = 71/391 (18%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           AF +   +L+M    P + + N  +        + +  ++  +L A G   +  +Y  LI
Sbjct: 122 AFSVLAKILKM-GYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLI 180

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N  CK+G          R+       NA  +N++I G+  +  + +A  L++++ A    
Sbjct: 181 NGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRIS 240

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+TY+ LI G    G    A++LF +M   N       KP+  T++ ++DG CKEG +
Sbjct: 241 PDVVTYSALIRGFFIVGKLKDAIDLFNKMILEN------IKPDVYTFNILVDGFCKEGRL 294

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            KAK +   M  ++I P+V T+N+L+ G C      E K +F  MM QG++P+VVT+  +
Sbjct: 295 KKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSL 354

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVR---------------------------------- 309
           MD  C  +++++A ++ + M QRGV                                   
Sbjct: 355 MDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHI 414

Query: 310 -PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN----------------- 351
            P+  TYN+L+DG C  GKI+ A +L   M   G   + ++YN                 
Sbjct: 415 IPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQP 474

Query: 352 ------ILINGYCKNKEVEEALSLYREMVSK 376
                 ILI G C++ ++E A  ++ +++ K
Sbjct: 475 NMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 156/350 (44%), Gaps = 36/350 (10%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           +  + + Y+S I    H+ND + A  LF  ++ Q    +   FN I+  L K++      
Sbjct: 30  LQKNFIPYSS-ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M   G+ PN                                    V++NILIN +
Sbjct: 89  SLSQQMEFEGINPNF-----------------------------------VTFNILINCF 113

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+   +  A S+  +++  G +P ++T NT   G     Q+  AL   D++   G   D 
Sbjct: 114 CQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQ 173

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y T I+GLCK G    A++L R +     +L+   YN +IDG+ K   +  A++L+  
Sbjct: 174 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSE 233

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + P+VVTY+ +I+G    G++  A DLF  M      PDV TF++L+ GF +   
Sbjct: 234 MVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGR 293

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             K   +L  M  + + P+ S  + +VD   K+    +    F +  +QG
Sbjct: 294 LKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQG 343



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 36/250 (14%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNIL 102
           +A  +F+ M+ +    P V +FNIL+        L K K+    +    + PN+ T+N L
Sbjct: 261 DAIDLFNKMI-LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTL 319

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ FCK  ++  G   F  +++    PN  T+ SL+ G     ++ +A  +F  +   G 
Sbjct: 320 VDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGV 379

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             NV +YN +ING C+      A+ LF EM + +        P+ VTY+++IDGLCK G 
Sbjct: 380 TANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKH------IIPDVVTYNSLIDGLCKSGK 433

Query: 223 VDKA-----------------------KALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           +  A                        AL  ++KD+ I P++ T   LI GLC +    
Sbjct: 434 ISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLE 493

Query: 260 EAKRLFIEMM 269
            A+++F +++
Sbjct: 494 AARKVFEDLL 503


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 180/566 (31%), Positives = 290/566 (51%), Gaps = 43/566 (7%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F  M++    PP + +++ ++ +L K +  D       ++   G
Sbjct: 233 KEGDVN-----KACDLFKEMVQ-RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P+ +TYN LI  +   G+       F  + R    P+    N+L+  L    +I EA 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC-------- 203
            +F  +   G  P+V +Y  ++NG    G  +   +LF+ M  G+G   V+C        
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKA 405

Query: 204 ----------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                                 KP+ VTY T+I  LC+ G +D A   F QM D+ + PD
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              Y+ LI G C      +AK L  E+M+ G++  +V F  I++ LCK  ++ +A  + D
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           L V  G+ P+A  YN LMDG+CL+GK+ +A  +F +M S G + + V Y  L+NGYCK  
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++E LSL+REM+ KGIKP+ + YN +  GLFE  +   A   F EM   G+A +  TY+
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 645

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GL KN    EA+ LF+ LR +  ++DI   N +I G+ ++ R++ A +LF S+   
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            LVP  VTY+IMI  L  +G +++A D+F  M+     PD    + ++   ++ NE  + 
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLL 567
              L K+ E+    +     ++VDL 
Sbjct: 766 GAYLSKIDERNFSLEHLTAMLLVDLF 791



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 179/585 (30%), Positives = 275/585 (47%), Gaps = 62/585 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----------------- 79
            REG    + P EA  + D + R   +P      N  LA+LA+                 
Sbjct: 40  VREG---TLRPEEAHDLLDELQR-RGTPVLDRDLNGFLAALARAPSSAACGSGPALAVAL 95

Query: 80  -NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            N+          L P  YTY IL++C  +  R  L    FG++LR+    +A   + L+
Sbjct: 96  FNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLL 155

Query: 139 KGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           KG     R  EA   L  +    GC P+V +YN L+  LC  G +  A +L   MA G  
Sbjct: 156 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG-- 213

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-- 255
             G VC P+ V Y+T+IDG  KEG V+KA  LF +M    I PD+VTY+S++H LC A  
Sbjct: 214 --GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271

Query: 256 ---------------------------------NDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                                              W EA R+F EM  Q + P VV  N 
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  K+ EA  + D M  +G  P+  +Y  +++G+   G +    +LF  M   G
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
                 ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A+
Sbjct: 392 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + F++M   GV  D   Y   I G C +G +++A EL   +      LDI  +  +I+ L
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F    +  L P+ V YN+++ G C  G+M+KA  +F  M      P+V
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           + +  L++G+ +I    +   L  +M +K + P   + +I++D L
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 261/526 (49%), Gaps = 17/526 (3%)

Query: 55  DYMLRMHPS-----PPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           D +LRM         P V ++N ++    K    NK  D    +   G+ P+L TY+ ++
Sbjct: 204 DDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVV 263

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   +        +++     P+  T+N+LI G  +  +  EA  +F +++     
Sbjct: 264 HALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 323

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+  NTL+  LC+ G    A ++F+ MA   G+      P+  +Y+ +++G   +G +
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSYTIMLNGYATKGCL 377

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
                LF  M  + I P + T+N LI    +    ++A  +F EM D GV+P VVT+  +
Sbjct: 378 VDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+  KMD+A    + M+ +GV P+   Y+ L+ GFC  G + +A+EL   + + G 
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + D V +  +IN  CK   V +A +++   V+ G+ P  V YN L  G   + ++E AL+
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FD M   G+  +   Y T ++G CK G I E + LFR +     +     YN +IDGL 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++GR   A   F  +    +  N  TY+I+++GL  +   D+A  LF ++       D+I
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T + +I G  +     +  +L   +    ++P A   SI++  L+K
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 723



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 151/578 (26%), Positives = 274/578 (47%), Gaps = 33/578 (5%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           NR+ S A  P     ++++  ++   D  TR        P  A   F  +LR       +
Sbjct: 97  NRAASRAQGPRVLSPTSYTYAILM--DCCTRAH-----RPELALAFFGQLLRTGLRVDAI 149

Query: 68  SSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKIGRVS-----LG 115
            + + LL    + K  D  L+         G  P++++YNIL+   C  G+       L 
Sbjct: 150 IASH-LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
            +A G  + S   P+   +N++I G   E  + +A  LF ++   G  P+++TY+++++ 
Sbjct: 209 MMAEGGTVCS---PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC+      A     +M N     GV+  P+  TY+ +I G    G   +A  +F +M+ 
Sbjct: 266 LCKARAMDKAEAFLRQMVNK----GVL--PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           ++I PDVV  N+L+  LC      EA+ +F  M  +G  P V ++ ++++       + +
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVD 379

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            + L DLM+  G+ P  CT+N L+  +   G +++A  +F  M   G K   V+Y  +I 
Sbjct: 380 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIA 439

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             C+  ++++A+  + +M+ +G+ P    Y+ L  G      +  A +L  E+  +G+  
Sbjct: 440 ALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D   + + I+ LCK G +++A  +F     +    D   YN L+DG C  G+++ A  +F
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++    + PNVV Y  ++ G C  G++D+   LF +M +    P  I ++++I G    
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619

Query: 536 NE--PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               P+KV    H+M E  +  +    SIV+  L KN 
Sbjct: 620 GRTVPAKVK--FHEMTESGIAMNKCTYSIVLRGLFKNR 655



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 181/399 (45%), Gaps = 13/399 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  IF+ M R H   P V ++  ++A+L +    D  +         G+ P+ Y Y+ 
Sbjct: 413 DKAMIIFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  FC  G +         I+ +    +   F S+I  L    R+M+A  +F      G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ + YN L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIG 585

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+  +LF +M  + I P  + YN +I GL  A     AK  F EM + G+  +  T++
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 645

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  L KNR  DEA  L   +    V+ +  T NT++ G     ++  A++LF S+   
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G     V+Y+I+I    K   VEEA  ++  M + G +P     N +   L + +++  A
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
                ++     + +  T    +D     G   E +   
Sbjct: 766 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  295 bits (754), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 177/548 (32%), Positives = 293/548 (53%), Gaps = 18/548 (3%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGL 92
           REG ++     +A+C+FD ML    SP  ++   +L    +  K  +      ++   G+
Sbjct: 218 REGQLD-----KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P++ TYN L+   CK GR       F  +++    P+++ + +L+ G   E  +++   
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L   +   G +P+   +N LI    + G    A+  F +M            PN VTY T
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG------LHPNIVTYGT 386

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++D LC+ G VD A + F ++  E + P+ V + +LIHGLC  + W++A+ L +EM+ +G
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+ + FN +++ LCK   +  A  + DLMV+  V+ +  TY TL+DG+CL GK++ A 
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEAT 506

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M   G K ++V+YN +INGYCKN  +E+A SL+R+M SKG+ P +V Y+T+  GL
Sbjct: 507 KLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGL 566

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F+  ++  A +L+  M + G+     TY   + GLC+N    +A+ +F  L ++   L  
Sbjct: 567 FQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQN 626

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           + +N +ID L K GR   A +LF SL    LVPNVVTY +M++ L   G +++  DLFL 
Sbjct: 627 RTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLS 686

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV--KN 570
           +E+N    D    + L+    +  E  K    L K+ E     +AS    +V L+   K 
Sbjct: 687 LEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFLVSSGKY 746

Query: 571 EISLKSLP 578
           +  + S+P
Sbjct: 747 DQHINSIP 754



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 278/573 (48%), Gaps = 49/573 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF-----PNLYTYNILI 103
            A  +FD +LR   +   +   N  L+++A+    ++   A  LF      +L TY+I+I
Sbjct: 50  HAHHLFDELLRRDTTS--IFDLNSALSAVAR----ESPAVALSLFNRMPRADLCTYSIVI 103

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGC 162
            C  + G + L F A GR++R+ +T  A TF+ L+KGL  + R  +A  +   ++ A GC
Sbjct: 104 GCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGC 163

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN  +YN L+ GLC    +  AL+L   M   +   G  C P+ V+Y+T+I+GL +EG 
Sbjct: 164 TPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGG--CPPDVVSYTTVINGLLREGQ 221

Query: 223 VDKAKALFLQMKDEN-----------------------------------INPDVVTYNS 247
           +DKA  LF +M D+                                    + PDVVTYN+
Sbjct: 222 LDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNT 281

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+  LC      EA+++F  M+ +G +P    +  ++        + +  +LLD+MV+ G
Sbjct: 282 LMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNG 341

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            +P+   +N L+  +   G ++ A   F  M   G   + V+Y  +++  C+  +V++A+
Sbjct: 342 TQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAM 401

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           S +  ++S+G+ P  V + TL  GL    + + A +L  EM   G+  +T  + T ++ L
Sbjct: 402 SQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHL 461

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK G +  A  +F  +  +  + D+  Y  LIDG C  G++  A +L   +    + PN 
Sbjct: 462 CKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNE 521

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTYN +I G C +G+++ A  LF  M      P ++ +  ++HG  +    +   EL   
Sbjct: 522 VTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLW 581

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           M +  +       +I++  L +N  +  +L  F
Sbjct: 582 MIKCGIKLPIGTYNIILQGLCQNNCTDDALRMF 614



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 5/290 (1%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           +  R  R + CTY+ ++      G ++ A    G +   G     ++++ L+ G C +K 
Sbjct: 87  LFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKR 146

Query: 363 VEEALSL-YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ----RDGVAADT 417
             +A+ +  R M + G  P   +YN L  GL + ++ + AL L   M     R G   D 
Sbjct: 147 TSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDV 206

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +YTT I+GL + G + +A  LF  +       +   YNCL+ G C SG+ K A  +F  
Sbjct: 207 VSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRK 266

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + P+VVTYN ++  LC +G+  +AR +F  M +    PD   +  L+HG+     
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY 326

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             ++++LL  M      PD  I +I++    K+ +  +++ +F    +QG
Sbjct: 327 LVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG 376



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 9/234 (3%)

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           ALSL+  M     +  + TY+ +         ++ A      + R G  A   T++  + 
Sbjct: 84  ALSLFNRMP----RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139

Query: 426 GLCKNGYIIEAVEL-FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL----PH 480
           GLC +    +A+++  R +  L C  +  +YN L+ GLC   R + A  L  ++      
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
           G   P+VV+Y  +I GL  +GQ+DKA  LF +M +   +P+ IT++ L+HG+    +P +
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
              +  KM    V PD    + ++  L KN  S+++   F    ++G   +S++
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSI 313


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 182/568 (32%), Positives = 292/568 (51%), Gaps = 47/568 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F  M++    PP + ++N ++ +L K +  D       ++    
Sbjct: 234 KEGDVN-----KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN +TYN LI  +   G+       F  + R    P+  T + L+  L    +I EA 
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------- 197
            +F  +   G  P+V +YN ++NG    G  +   +LF+ M  G+G              
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKA 406

Query: 198 ------------------EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                             + GV  KP+ VTY T+I  LC+ G +D A   F QM D+ + 
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGV--KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 464

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD   YN LI G C      +AK L  E+M+ G+   +V F+ I++ LCK  ++ +A  +
Sbjct: 465 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 524

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            DL V  G+ P+A  YN LMDG+CL+GK+ +A  +F +M S G + + V Y  L+NGYCK
Sbjct: 525 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 584

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++E LSL+REM+ +GIKP+ + Y+ +  GLFE  +   A   F EM   G+A D  T
Sbjct: 585 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICT 644

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + GL KN    EA+ LF+ LR +  +++I   N +IDG+ ++ R++ A +LF S+ 
Sbjct: 645 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 704

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVP+VVTY+IMI  L  +G +++A D+F  M+     P+    + ++   ++ NE  
Sbjct: 705 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 764

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +    L K+ E+    +     ++VDL 
Sbjct: 765 RAGAYLSKIDERNFSLEHLTAMLLVDLF 792



 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 181/585 (30%), Positives = 279/585 (47%), Gaps = 62/585 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----------------- 79
            REG    + P EA  + D + R   +P      N  LA+LA+                 
Sbjct: 41  VREG---TLRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVAL 96

Query: 80  -NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            N+          L P  +TY IL++C  +  R  L    FG++LR+    N    N L+
Sbjct: 97  FNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLL 156

Query: 139 KGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           +G     R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L   MA G  
Sbjct: 157 EGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-- 214

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-- 255
             G VC PN V Y+T+IDG  KEG V+KA  LF +M    I PD+VTYNS++H LC A  
Sbjct: 215 --GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 272

Query: 256 ---------------------------------NDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                                              W EA R+F EM    + P VVT ++
Sbjct: 273 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 332

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  K+ EA  + D M  +G  P+  +YN +++G+   G +    +LF  M   G
Sbjct: 333 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 392

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A+
Sbjct: 393 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 452

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + F++M   GVA D   Y   I G C +G +++A EL   +      LDI  ++ +I+ L
Sbjct: 453 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 512

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F    +  L P+ V YN+++ G C  G+M+KA  +F  M      P+V
Sbjct: 513 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 572

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           + +  L++G+ +I    +   L  +M ++ + P   + SI++D L
Sbjct: 573 VGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 262/526 (49%), Gaps = 17/526 (3%)

Query: 55  DYMLRMHPS-----PPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           D +LRM         P V ++N ++    K    NK  D    +   G+ P+L TYN ++
Sbjct: 205 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 264

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   +        +++     PN  T+N+LI G  +  +  EA  +F +++     
Sbjct: 265 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 324

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+T + L+  LC+ G    A ++F+ MA   G+      P+  +Y+ +++G   +G +
Sbjct: 325 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSYNIMLNGYATKGCL 378

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
                LF  M  + I PD  T+N LI    +    ++A  +F EM D GV+P VVT+  +
Sbjct: 379 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 438

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+  KMD+A    + M+ +GV P+   YN L+ GFC  G + +A+EL   + + G 
Sbjct: 439 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 498

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V ++ +IN  CK   V +A +++   V+ G+ P  V YN L  G   + ++E AL+
Sbjct: 499 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 558

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FD M   G+  +   Y T ++G CK G I E + LFR +     +     Y+ +IDGL 
Sbjct: 559 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 618

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++GR   A   F  +    +  ++ TYNI+++GL  +   D+A  LF ++       ++I
Sbjct: 619 EAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 678

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T + +I G  +     +  +L   +   +++P     SI++  L+K
Sbjct: 679 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 724



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 181/399 (45%), Gaps = 13/399 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  IF+ M R H   P V ++  ++A+L +    D  +         G+ P+ Y YN 
Sbjct: 414 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  FC  G +         I+ +    +   F+S+I  L    R+M+A  +F      G
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ + YN L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIG 586

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+  +LF +M    I P  + Y+ +I GL  A     AK  F EM + G+   + T+N
Sbjct: 587 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYN 646

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  L KNR  DEA  L   +    V+ N  T NT++DG     ++  A++LF S+   
Sbjct: 647 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
                 V+Y+I+I    K   VEEA  ++  M + G +P     N +   L + +++  A
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
                ++     + +  T    +D     G   E +   
Sbjct: 767 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 169/338 (50%), Gaps = 9/338 (2%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P   TY  L+     A+    A   F +++  G++ +++  N +++  C+ ++ DEA 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA- 168

Query: 298 RLLDLMVQR----GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYN 351
             LD+++ R    G  P+  +Y+ L+   C  GK  +A++L   M   G  C  + V+YN
Sbjct: 169 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I+G+ K  +V +A  L++EMV +GI P +VTYN++   L +   ++ A     +M   
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            V  +  TY   I G    G   EAV +F+ +R      D+   + L+  LCK G++K A
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++F ++      P+V +YNIM+ G    G +    DLF  M  +  APD  TF++LI  
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 406

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +       K   + ++M++  V PD      V+  L +
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 444


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 167/486 (34%), Positives = 264/486 (54%), Gaps = 48/486 (9%)

Query: 42  INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPN 95
           I  +  +++  +F +M++  P  P ++ F+ LL++++K K YD       ++   G+  N
Sbjct: 57  IRYMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L T NIL+NCFC+  ++SL     G++++                               
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMMK------------------------------- 144

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
                G EP+++T+ +L+NG CR      AL +F+ M     E+G   +PN V Y+TIID
Sbjct: 145 ----LGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMV----EMGY--EPNVVIYNTIID 194

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLCK   VD A  L  +M+ + I PD VTYNSLI GLC++  W++A R+   M  + + P
Sbjct: 195 GLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYP 254

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            V TFN ++D   K  ++ EA  L + M++R + P+  TY+ L+ G C+  +++ AE++F
Sbjct: 255 DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMF 314

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
           G M S GC  D V+Y+ILINGYCK+K+VE  + L+ EM  +G+    VTY  L  G    
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRA 374

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            ++  A ++F  M   GV  +  TY   + GLC NG I +A+ +   ++    + DI  Y
Sbjct: 375 GKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTY 434

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +I G+CK+G +  AW+L+CSL    L P++ TY  M+ GL   G   +A  LF  M+E
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494

Query: 516 NAAAPD 521
           +   P+
Sbjct: 495 DGILPN 500



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 230/432 (53%), Gaps = 6/432 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ A F+ L+  +    +      L+ +++  G   N+ T N L+N  CR     +AL+ 
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E      P+ VT+ ++++G C+   +  A  +F +M +    P+VV YN++
Sbjct: 139 LGKMMKLGHE------PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTI 192

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I GLC +   + A  L   M   G++P  VT+N ++  LC + + D+A+R++  M +R +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  T+N L+D     G+I+ AEEL+  M       D V+Y++LI G C    ++EA  
Sbjct: 253 YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQ 312

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++  MVSKG  P VVTY+ L  G  +  +VEH +KLF EM + GV  +T TYT  I G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC 372

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           + G +  A E+F+ +       +I  YN L+ GLC +G+++ A  +   +    +  ++V
Sbjct: 373 RAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIV 432

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TYNI+I+G+C  G++  A DL+  +      PD+ T+  ++ G  +     + + L  KM
Sbjct: 433 TYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKM 492

Query: 549 KEKKVMPDASIV 560
           KE  ++P+   V
Sbjct: 493 KEDGILPNECYV 504



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 190/365 (52%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+   +S ++  + K    D    L+ QM+   I  ++ T N L++  C  +  + A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +MM  G +P +VTF  +++  C+  ++ +A  + D MV+ G  PN   YNT++DG C 
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             +++ A +L   ME  G + D V+YN LI+G C +   ++A  +   M  + I P V T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +N L     +  ++  A +L++EM R  +  D  TY+  I GLC    + EA ++F  + 
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  D+  Y+ LI+G CKS +++   +LFC +    +V N VTY ++IQG C  G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A ++F  M      P++IT+++L+HG     +  K   +L  M++  +  D    +I++
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438

Query: 565 DLLVK 569
             + K
Sbjct: 439 RGMCK 443



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 166/306 (54%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +++  LF  M+     PS+  F+ ++  + K +K D    L + M   G+  N CT N L
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ FC   +++ A    G M  +G + D V++  L+NG+C+   + +AL ++  MV  G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +P VV YNT+  GL +  QV++AL L + M+ DG+  D  TY + I GLC +G   +A  
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +   +   D+  +N LID   K GR+  A EL+  +    L P++VTY+++I GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
              ++D+A  +F  M      PDV+T+ +LI+G+ +  +     +L  +M ++ V+ +  
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 559 IVSIVV 564
             ++++
Sbjct: 363 TYTVLI 368



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 159/341 (46%), Gaps = 15/341 (4%)

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I GLC +         + EM+  G+               +  K+D++  L   MVQ   
Sbjct: 33  ICGLCFSRRAYSGGSDYREMLRNGI---------------RYMKLDDSLDLFFHMVQCRP 77

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+   ++ L+     M K +    L+  M+ +G  H+  + NIL+N +C+  ++  ALS
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
              +M+  G +P +VT+ +L  G     ++  AL +FD M   G   +   Y T IDGLC
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+  +  A++L   + +     D   YN LI GLC SGR   A  +   +    + P+V 
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           T+N +I     +G++ +A +L+ +M   +  PD++T+ +LI+G    +   +  ++   M
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
             K   PD    SI+++   K++     +  F    ++G V
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 161/443 (36%), Positives = 249/443 (56%), Gaps = 13/443 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G +PN  TYN L++  C  GR+S     + R++++ ++P+  T+N+L+ G      + EA
Sbjct: 5   GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F      G  P+V+TYN LING C+      A  + + M + N        P+ VTY
Sbjct: 65  LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN------LVPDVVTY 118

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-NDWNEAKRLFIEMM 269
           +++++GLCK G VD+A+ L +   D+  +P+V+TY++LI GLC      +EA +LF  ++
Sbjct: 119 NSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            QG +P V T+N+++D L K  +++EA  L   +V+ G+ P+A TY   +DG C  G++ 
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  +   M+  GC  D VS+N +ING CK K V+EA  L   M +KG  P  +++NTL 
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK---NGYIIEAVELFRTLRIL 446
            G     + + A+  F EM + GV     TY   +DGLCK    G I EA+ LF  +   
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  Y+ LIDGL K+G+L  A  L  ++     +PNV TYN +I GLC   ++D+A
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415

Query: 507 RDLFLDMEENAAAPDVITFDMLI 529
            +LF+ M E    PD IT+  +I
Sbjct: 416 LELFVAMVEKGCVPDTITYGTII 438



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/434 (35%), Positives = 249/434 (57%), Gaps = 13/434 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F PN  T+N+L+ GL    R+ +A AL+ ++   G  P+V+TYNTL++G C+ G    AL
Sbjct: 6   FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL 65

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +F+    G  + G V  P+ VTY+ +I+G CK   +D+A+ +  +M  EN+ PDVVTYN
Sbjct: 66  KIFD----GAVKRGFV--PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN-RKMDEASRLLDLMVQ 305
           SL++GLC     +EA+ L +   D+G  P+V+T++ ++  LC+  R + EA +L   +++
Sbjct: 120 SLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +G  P   TYN L+DG     ++N A ELF  +   G + D ++Y + I+G CK   VE+
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           AL + ++M  KG  P VV++N +  GL +  +V+ A  L   M+  G + +  ++ T I 
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS---GRLKFAWELFCSLPHGV 482
           G C+ G   +A+  F+ +     +  +  YN L+DGLCK+   GR+K A  LF ++    
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            VP+VVTY+ +I GL   G++D AR L   ME     P+V T++ LI G   + +  +  
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416

Query: 543 ELLHKMKEKKVMPD 556
           EL   M EK  +PD
Sbjct: 417 ELFVAMVEKGCVPD 430



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/448 (33%), Positives = 240/448 (53%), Gaps = 19/448 (4%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           +R H   P   ++N LL+ L              R+   G  P++ TYN L++ FCK+G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +      F   ++  F P+  T+N+LI G     ++ EA  +  ++ +    P+V+TYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-GFVDKAKALF 230
           L+NGLC+ G    A  L  +             PN +TYST+I GLC+E   V +A  LF
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKG---------FSPNVITYSTLISGLCRELRGVSEALKLF 171

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             +  +   P+V TYN LI GL   +  NEA  LF  ++  G++P  +T+ V +D LCK 
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            ++++A  +L  M ++G  P+  ++N +++G C   +++ AE L   ME+ GC  + +S+
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ---VEHALKLFDE 407
           N LI G C+  + ++A++ ++EM+ +G+KPTVVTYN L  GL +  Q   ++ A+ LFD 
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G   D  TY+  IDGL K G + +A  L   +    C  ++  YN LI GLC   +
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEK 411

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           +  A ELF ++     VP+ +TY  +I 
Sbjct: 412 VDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/440 (34%), Positives = 235/440 (53%), Gaps = 13/440 (2%)

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++  G  PN ITYN L++GLC  G    A  L+E M      I     P+ VTY+T++ G
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM------IKAGYSPDVVTYNTLLHG 54

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
            CK G +D+A  +F         PDVVTYN+LI+G C A+  +EA+R+   M+ + + P 
Sbjct: 55  FCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPD 114

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL-MGKINRAEELF 335
           VVT+N +++ LCKN ++DEA  L+   V +G  PN  TY+TL+ G C  +  ++ A +LF
Sbjct: 115 VVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLF 171

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
           GS+   G + +  +YNILI+G  K   V EA  L+  +V  G++P  +TY     GL + 
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +VE AL +  +M   G   D  ++   I+GLCK   + EA  L   +    C  +  ++
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC---NDGQMDKARDLFLD 512
           N LI G C++G+ K A   F  +    + P VVTYNI++ GLC    +G++ +A  LF  
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 351

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M E    PDV+T+  LI G  +  +      LL  M+ K  +P+    + ++  L   E 
Sbjct: 352 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEK 411

Query: 573 SLKSLPSFLVQERQGEVGES 592
             ++L  F+    +G V ++
Sbjct: 412 VDEALELFVAMVEKGCVPDT 431


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 166/466 (35%), Positives = 247/466 (53%), Gaps = 7/466 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T N+LIN FCK GR+          +   F P+  T+N+L+ GL        A  +   +
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G +P++ TYN+LI+GLC+ G    A+ + ++M + +      C PN VTY+ II  L
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD------CSPNAVTYNAIISSL 388

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CKE  VD+A  +   +  + I PDV T+NSLI GLC +++   A  LF EM  +G +P  
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+N+++D LC +RK++EA  LL  M   G   N   YNTL+DGFC   +I  AEE+F  
Sbjct: 449 FTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDE 508

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME  G   D V+YN LI+G CK+K VE+A  L  +M+ +G++P   TYN+L     +   
Sbjct: 509 MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGD 568

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A  +   M   G   D  TY T I GLCK G +  A  L R++++    L   AYN 
Sbjct: 569 IKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNP 628

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN-DGQMDKARDLFLDMEEN 516
           +I  L K  R   A  LF  +      P+ +TY I+ +GLCN  G + +A D  ++M E 
Sbjct: 629 VIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIER 688

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
              P+  +F ML  G   ++    + +L+  + EK    +  I +I
Sbjct: 689 GNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTI 734



 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 149/469 (31%), Positives = 249/469 (53%), Gaps = 6/469 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++ T+NILI   CK  +V    +    +     +P+  TF ++++G      +  A  + 
Sbjct: 202 DVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIK 261

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++  +GC    +T N LING C+ G    AL+  +E  +         +P+  TY+T++
Sbjct: 262 EQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG------FRPDQFTYNTLV 315

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +GLCK G    A  +   M    ++PD+ TYNSLI GLC   +  EA ++  +M+ +   
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+ VT+N I+  LCK  ++DEA+ +  L+  +G+ P+ CT+N+L+ G CL      A +L
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M+  GC+ D+ +YN+LI+  C ++++EEAL+L +EM   G    VV YNTL  G  +
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++E A ++FDEM+  GV+ D+ TY T IDGLCK+  + +A +L   + +     D   
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+   CK+G +K A ++  ++      P++VTY  +I GLC  G++  A  L   ++
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ 615

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
                     ++ +I    + N   +   L  +M +K   PDA    IV
Sbjct: 616 MKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 250/507 (49%), Gaps = 13/507 (2%)

Query: 70  FNILLASLAKNKHYDTRLNATGLF-------PNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           F I + S  K + YD  +    +        P+   YN+L+N      ++ L   A   +
Sbjct: 135 FLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSM 194

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +R     + +TFN LIK L    ++  A  +  ++ ++G  P+  T+ T++ G    G+ 
Sbjct: 195 VRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNL 254

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL + E+M     E G  C    VT + +I+G CK+G +D+A +   +   E   PD 
Sbjct: 255 DGALRIKEQMV----EYGCPC--TDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQ 308

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TYN+L++GLC       A  +   M+  G+ P + T+N ++  LCK  +++EA ++LD 
Sbjct: 309 FTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQ 368

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV R   PNA TYN ++   C   +++ A E+   + S G   D  ++N LI G C +  
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            + A+ L+ EM  KG +P   TYN L   L    ++E AL L  EM+ +G A +   Y T
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG CKN  I EA E+F  + +     D   YN LIDGLCKS R++ A +L   +    
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L P+  TYN ++   C  G + KA D+   M  +   PD++T+  LI G  +       +
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
            LL  ++ K ++      + V+  L K
Sbjct: 609 RLLRSIQMKGMVLTPHAYNPVIQALFK 635



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/407 (35%), Positives = 222/407 (54%), Gaps = 15/407 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+  L K  H    +         GL P++YTYN LI+  CK+G +      
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++    +PNA T+N++I  L  E+R+ EA  +   L + G  P+V T+N+LI GLC 
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           + +   A++LFEEM  G G     C+P+  TY+ +ID LC    +++A  L  +M+    
Sbjct: 426 SSNHKSAMDLFEEM-KGKG-----CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             +VV YN+LI G C      EA+ +F EM  QGV    VT+N ++D LCK++++++A++
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+D M+  G+RP+  TYN+L+  FC  G I +A ++  +M S GC  D V+Y  LI+G C
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   V+ A  L R +  KG+  T   YN +   LF+ ++   A++LF EM       D  
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659

Query: 419 TYTTFIDGLCKNGYII-EAVELFRTLRILKCEL-DIQAYNCLIDGLC 463
           TY     GLC  G  I EAV+ F    I +  + +  ++  L +GLC
Sbjct: 660 TYKIVYRGLCNGGGPIGEAVD-FTVEMIERGNIPEFSSFVMLAEGLC 705



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 220/461 (47%), Gaps = 8/461 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFT-KLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P   T   LI+ L  ++  + A  +F    K     P+   Y  ++  L + G       
Sbjct: 59  PPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRR 118

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYN 246
           + EEM          C+ +   +   ++   K    D+   +   M+DE  I PD   YN
Sbjct: 119 VLEEMKLSG------CEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYN 172

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            L++ L  AN     +     M+ + ++  V TFN+++  LCK  ++  A  +++ M   
Sbjct: 173 VLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSY 232

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P+  T+ T+M G+   G ++ A  +   M   GC   DV+ N+LING+CK   +++A
Sbjct: 233 GLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQA 292

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           LS  +E VS+G +P   TYNTL  GL +I   +HA+++ D M   G+  D  TY + I G
Sbjct: 293 LSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISG 352

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G I EAV++   +    C  +   YN +I  LCK  R+  A E+   L    ++P+
Sbjct: 353 LCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPD 412

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V T+N +IQGLC       A DLF +M+     PD  T++MLI       +  +   LL 
Sbjct: 413 VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLK 472

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +M+      +  I + ++D   KN+   ++   F   E QG
Sbjct: 473 EMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 216/453 (47%), Gaps = 21/453 (4%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F P+++ +  +++ L           +  ++K  GCE +   +   +    +        
Sbjct: 93  FVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGK-------F 145

Query: 187 NLFEEMANGNGEIGVV--------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            L++E+      +G+V         KP+T  Y+ +++ L     +   ++    M    I
Sbjct: 146 ELYDEV------VGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRI 199

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             DV T+N LI  LC A+    A  +  EM   G+ P   TF  IM    +   +D A R
Sbjct: 200 RHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALR 259

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + MV+ G      T N L++GFC  G+I++A        S G + D  +YN L+NG C
Sbjct: 260 IKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLC 319

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K    + A+ +   M+  G+ P + TYN+L  GL ++ ++E A+K+ D+M     + +  
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I  LCK   + EA E+ R L       D+  +N LI GLC S   K A +LF  +
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+  TYN++I  LC+  ++++A +L  +ME N  A +V+ ++ LI GF +    
Sbjct: 440 KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRI 499

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +  E+  +M+ + V  D+   + ++D L K++
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSK 532


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 168/463 (36%), Positives = 252/463 (54%), Gaps = 16/463 (3%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIG 110
           +L  H SP  +  FN +L SL K K+Y T      +++  G+  NL T +ILINCFC +G
Sbjct: 2   LLVRHTSP--IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLG 59

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           +++  F   G+IL+  + PN  T+ +L+KGL  +  + +      K+ A   + N ++Y 
Sbjct: 60  QMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYG 119

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           TL+NGLC+TG T  A+ L   + + +       +PN V YS IIDGLCK+  V++A  L+
Sbjct: 120 TLLNGLCKTGETRCAIKLLRMIEDRS------TRPNVVMYSAIIDGLCKDKLVNEAYDLY 173

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M    I P+V+TYN+LI   C A     A  L  EM+ + + P V TF++++D LCK 
Sbjct: 174 SEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K   A ++   MVQ GV PN  +YN +++G C   +++ A  L   M       D V+Y
Sbjct: 234 GK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 291

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N LI+G CK+  +  AL+L  EM  +G    VVTY +L   L +   ++ A  LF +M+ 
Sbjct: 292 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+     TYT  IDGLCK G +  A ELF+ L +  C +D+  Y  +I GLCK G    
Sbjct: 352 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           A  +   +     +PN VT+ I+I+ L    + DKA  L  +M
Sbjct: 412 ALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 225/456 (49%), Gaps = 43/456 (9%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           FN ++  L      +   +L  ++   G E N++T + LIN  C  G    + +L  ++ 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
               ++G    PNT+T++T++ GLC +G V K      ++  +    + V+Y +L++GLC
Sbjct: 73  ----KLGYX--PNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
              +   A +L   + D+  +P+VV ++ I+D LCK++ ++EA  L   M  R + PN  
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYNTL+  FCL G++  A  L   M       D  +++ILI+  CK  E + A  ++  M
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK--EGKNAKQIFHAM 244

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           V  G+ P V +YN +  GL +  +V+ A+ L  EM    +  DT TY + IDGLCK+G I
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304

Query: 434 I-----------------------------------EAVELFRTLRILKCELDIQAYNCL 458
                                               +A  LF  ++    +  +  Y  L
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDGLCK GRLK A ELF  L       +V TY +MI GLC +G  D+A  +   ME+N  
Sbjct: 365 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 424

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            P+ +TF+++I      +E  K  +LLH+M  K ++
Sbjct: 425 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 193/396 (48%), Gaps = 32/396 (8%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNI-----LLASLAKNKHYDTRLNATGLFPNLYTYNILIN 104
           +F +   +L++   P  ++   +     L   + K  H+  ++ A     N  +Y  L+N
Sbjct: 64  SFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             CK G           I      PN   ++++I GL  +  + EA  L++++ A    P
Sbjct: 124 GLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFP 183

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEM--ANGNGE-------IGVVCK----------- 204
           NVITYNTLI   C  G  M A +L  EM   N N +       I  +CK           
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHA 243

Query: 205 -------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                  PN  +Y+ +I+GLCK   VD+A  L  +M  +N+ PD VTYNSLI GLC +  
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
              A  L  EM  +G    VVT+  ++D LCKN+ +D+A+ L   M +RG++P   TY  
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+DG C  G++  A+ELF  +   GC  D  +Y ++I+G CK    +EAL++  +M   G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
             P  VT+  +   LFE  + + A KL  EM   G+
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 171/346 (49%), Gaps = 2/346 (0%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           ++ +N ++  L     +     L  +M  +G++ ++VT +++++  C   +M  +  LL 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            +++ G  PN  T+ TLM G CL G++ +       + +   + + VSY  L+NG CK  
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           E   A+ L R +  +  +P VV Y+ +  GL +   V  A  L+ EM    +  +  TY 
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I   C  G ++ A  L   + +     D+  ++ LID LCK G  K A ++F ++   
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            + PNV +YNIMI GLC   ++D+A +L  +M      PD +T++ LI G  +    +  
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             L+++M  +    D    + ++D L KN+   K+   F+  + +G
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 353


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 176/527 (33%), Positives = 270/527 (51%), Gaps = 13/527 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNIL 102
           EA  +F+  L+     P V S++ L+ SL +   ++  L       A G  PNL+TYN L
Sbjct: 27  EAQLLFEE-LKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTL 85

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++C  K G+          +  +   P+  T+N LI  L    R+ EA  LF +++  GC
Sbjct: 86  VDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGC 145

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  TYN+LI GL + G +  A+ L EEM          C P+ +TYS++I GL K+G 
Sbjct: 146 VPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG------CPPDVMTYSSLITGLGKDGE 199

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             KA  LF +MK     PD +T+ +L+  L  A   ++A  L  EM ++GV+P VVT+N 
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++    K   + EA  LLD M + G +P+  TY+ L+ G     +++ A ++   ME  G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  D ++YN LING  K   + +A  L+  M SKG  P VVTY+TL   L +  +VE A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF+EM+  G+  D  TY + I  L K G + +A  LF  +R      D+  YN  ++ L
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            + GR K A ++F  +    L+P+V TY+ ++ GL    ++D A  L  ++ E   A D 
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + FD  +          + +ELL     K + P AS  + ++D L K
Sbjct: 500 LKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAK 546



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 174/500 (34%), Positives = 260/500 (52%), Gaps = 13/500 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
           ++  PSP  V ++N LL +LAK    +        L A    P++ +Y+ LIN   + G+
Sbjct: 1   MKGFPSPN-VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGK 59

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
                     +      PN  T+N+L+  L    +  EA  L  +++  GC P+V TYN 
Sbjct: 60  WEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNC 119

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI+ L + G    A  LF EM     E G  C P+T TY+++I GL K G   KA  L  
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMR----ERG--CVPDTFTYNSLIYGLGKVGRSQKAMELLE 173

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M+     PDV+TY+SLI GL    +  +A +LF EM  +G +P  +TF  +MD L K  
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++D+A  LLD M +RGV+P   TYN L+ GF  +G +  A  L   M+  GCK D V+Y+
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI G  K  +++EA  + ++M  +G  P  +TYNTL  GL +   +  A +LFD M+  
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   D  TY+T I  L K   +  A  LF  +  +  + D+  Y  +I  L K+G++  A
Sbjct: 354 GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA 413

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             LF  +    L P+V+TYN  +  L   G+  +AR +F DM+E+   PDV T+D L+ G
Sbjct: 414 DRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLG 473

Query: 532 FIRINEPSKVNELLHKMKEK 551
             +  E      LL ++ E+
Sbjct: 474 LSKTKEVDDACGLLKELIEQ 493



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 171/528 (32%), Positives = 263/528 (49%), Gaps = 47/528 (8%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N L+  L K   +D        +   G  P++ TYN LI+   K GR+S  F  
Sbjct: 77  PNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTL 136

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P+  T+NSLI GL    R  +A  L  +++  GC P+V+TY++LI GL +
Sbjct: 137 FAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGK 196

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T+ A  LF+EM    G      KP+++T++ ++D L K G VD A  L  +MK+  +
Sbjct: 197 DGETVKAFKLFQEMKR-RGR-----KPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P VVTYN+LI G     D  EA  L  EM   G +P VVT++ ++  L K  ++DEA +
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  M + G  P+  TYNTL++G    G +N A  LF  M+S GC  D V+Y+ LI    
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   VE A  L+ EM S GI+P + TY ++   L +  QV+ A +LF EM+  G++ D  
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR----------- 467
           TY  F++ L + G   EA ++F  ++      D+  Y+ L+ GL K+             
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490

Query: 468 ---------LKF--------AW-------ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                    LKF        +W       EL        L P   +YN +I  L   G++
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRV 550

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +A +   D++E    PD++++  LI    +  +     ELL +M ++
Sbjct: 551 SEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKR 598



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/430 (35%), Positives = 227/430 (52%), Gaps = 8/430 (1%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +PN  T+NSL+  L    +  EA  LF +LKA    P+V++Y+ LIN L R G    AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 188 LFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +  EM A G       CKPN  TY+T++D L K G  D+A  L  +M+D    PDV TYN
Sbjct: 66  VVAEMQAKG-------CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYN 118

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI  L  A   +EA  LF EM ++G  P   T+N ++  L K  +  +A  LL+ M + 
Sbjct: 119 CLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERH 178

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+  TY++L+ G    G+  +A +LF  M+  G K D +++  L++   K   V++A
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDA 238

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           L L  EM  +G+KP VVTYN L  G  ++  +  A  L DEM+R+G   D  TY+  I G
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           L K   + EA ++ + +    C  D   YN LI+GL K+G L  A  LF  +      P+
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTY+ +I  L    +++ A  LF +ME     PD+ T+  +I    +  +    + L  
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418

Query: 547 KMKEKKVMPD 556
           +M+ K + PD
Sbjct: 419 EMRGKGLSPD 428



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 192/365 (52%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN VTY+++++ L K G  ++A+ LF ++K     PDVV+Y+ LI+ L  A  W  A  +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             EM  +G +P++ T+N ++D L K  + DEA RLL  M   G  P+  TYN L+     
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+++ A  LF  M   GC  D  +YN LI G  K    ++A+ L  EM   G  P V+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y++L  GL +  +   A KLF EM+R G   D+ T+T  +D L K G + +A+EL   ++
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               +  +  YN LI G  K G L  A+ L   +      P+VVTY+ +I GL    Q+D
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  +   ME+    PD IT++ LI+G  +    +    L  +MK K   PD    S ++
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 565 DLLVK 569
             L K
Sbjct: 367 TALGK 371



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 208/424 (49%), Gaps = 13/424 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNIL 102
           +AF +F  M R    P  ++ F  L+ +L K    D  L         G+ P + TYN L
Sbjct: 202 KAFKLFQEMKRRGRKPDSIT-FTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  F K+G +   +     + R+   P+  T++ LI GL   S++ EA  +  K++  GC
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ ITYNTLINGL + G    A  LF+ M +        C P+ VTYST+I  L K   
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG------CNPDVVTYSTLITALGKAAR 374

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V+ A  LF +M+   I PD+ TY S+I  L  A   ++A RLF EM  +G+ P V+T+N 
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            ++ L +  +  EA ++ + M + G+ P+  TY+ L+ G     +++ A  L   +   G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  D + ++  +        V+EA  L +   SKG+ P   +YN L   L +  +V  A 
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
              ++++  G   D  +Y++ I  L + G I  A EL   +     +L  ++Y+ L+  L
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614

Query: 463 CKSG 466
              G
Sbjct: 615 QDWG 618



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 184/331 (55%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P+VVTYNSL++ L  A    EA+ LF E+      P VV+++ +++ L +  K + A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           ++  M  +G +PN  TYNTL+D     G+ + A  L   M   GC  D  +YN LI+   
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   + EA +L+ EM  +G  P   TYN+L  GL ++ + + A++L +EM+R G   D  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY++ I GL K+G  ++A +LF+ ++    + D   +  L+D L K+GR+  A EL   +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P VVTYN +I G    G + +A +L  +M+ N   PDV+T+  LI G I+ ++ 
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  ++L KM+++   PD    + +++ L K
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGK 336



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 108/213 (50%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P VVTYN+L   L +  Q E A  LF+E++      D  +Y+  I+ L + G    A+E+
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              ++   C+ ++  YN L+D L K+G+   A  L   +     VP+V TYN +I  L  
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++ +A  LF +M E    PD  T++ LI+G  ++    K  ELL +M+     PD   
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            S ++  L K+  ++K+   F   +R+G   +S
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDS 219


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 249/444 (56%), Gaps = 8/444 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           ++ G   +  + E   L   + A G  PN   +N   +   + G    A+++F +M    
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   P+ V+Y  +ID LCK G VD A+  F QM +E + P++V ++SL++GLC  +
Sbjct: 61  ------LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSID 114

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
            W + + LF EM++ G+ P++V FN I+  LCK  ++ E  RL+D +   GVRP+  +YN
Sbjct: 115 KWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYN 174

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           TL+DG CL G I+ A +L   M S+G K +  SYN L++GYCK   ++ A SL+R+M+S 
Sbjct: 175 TLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSN 234

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           GI P VVTYNT+  GLF+  +   A +L+  M   G      TY T ++GLCK+  + EA
Sbjct: 235 GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEA 294

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            ++F++L     +L+I  +  +I  L K GR + A +LF ++P   LVP+VVTY ++ + 
Sbjct: 295 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAEN 354

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L  +G +++   LF  ME+N  AP+    + L+   +   + S+    L K+ E+    +
Sbjct: 355 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 414

Query: 557 ASIVSIVVDLLVKNEIS--LKSLP 578
           AS  S+++ +   +E     KSLP
Sbjct: 415 ASTTSMLISIFSSDEYQHHAKSLP 438



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 209/421 (49%), Gaps = 6/421 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ PN + +NI  + + K G +      F ++ +   +P+A ++ +LI  L    R+ 
Sbjct: 23  ANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVD 82

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A   F ++   G  PN++ +++L+ GLC          LF EM N    +G+   PN V
Sbjct: 83  DAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLN----VGI--HPNIV 136

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            ++TI+  LCKEG V + + L   ++   + PDV++YN+LI G C A   +EA +L   M
Sbjct: 137 FFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGM 196

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G++P+  ++N ++   CK  ++D A  L   M+  G+ P   TYNT++ G     + 
Sbjct: 197 VSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRF 256

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A+EL+ +M + G K    +YN ++NG CK+  V+EA  +++ + SKG++  ++T+  +
Sbjct: 257 SEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 316

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +  + E A+ LF  +  +G+  D  TY    + L + G + E   LF  +     
Sbjct: 317 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGT 376

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             + Q  N L+  L   G +  A      L          T +++I    +D     A+ 
Sbjct: 377 APNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKS 436

Query: 509 L 509
           L
Sbjct: 437 L 437



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 194/423 (45%), Gaps = 47/423 (11%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    FNI  ++ AK    +K  D   ++   GL P+  +Y  LI+  CK+GRV    + 
Sbjct: 28  PNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVK 87

Query: 119 FGRILRSCFTPNAATFNSLIKGLHA----------------------------------- 143
           F +++    TPN   F+SL+ GL +                                   
Sbjct: 88  FNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 147

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E R+ME   L   ++  G  P+VI+YNTLI+G C  G    A  L E      G + V  
Sbjct: 148 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE------GMVSVGL 201

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           KPN+ +Y+T++ G CK G +D A +LF +M    I P VVTYN+++HGL     ++EAK 
Sbjct: 202 KPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 261

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L++ M++ G +  + T+N I++ LCK+  +DEA ++   +  +G++ N  T+  ++    
Sbjct: 262 LYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 321

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+   A +LF ++ + G   D V+Y ++     +   +EE  SL+  M   G  P   
Sbjct: 322 KGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 381

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
             N L   L     +  A     ++     + +  T +  I     + Y   A  L +  
Sbjct: 382 MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKY 441

Query: 444 RIL 446
           RIL
Sbjct: 442 RIL 444


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 181/568 (31%), Positives = 292/568 (51%), Gaps = 47/568 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F  M++    PP + ++N ++ +L K +  D       ++    
Sbjct: 244 KEGDVN-----KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN +TYN LI  +   G+       F  + R    P+  T + L+  L    +I EA 
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------- 197
            +F  +   G  P+V +YN ++NG    G  +   +LF+ M  G+G              
Sbjct: 358 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKA 416

Query: 198 ------------------EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                             + GV  KP+ VTY T+I  LC+ G +D A   F QM D+ + 
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGV--KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 474

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD   YN LI G C      +AK L  E+M+ G+   +V F+ I++ LCK  ++ +A  +
Sbjct: 475 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 534

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            DL V  G+ P+A  Y+ LMDG+CL+GK+ +A  +F +M S G + + V Y  L+NGYCK
Sbjct: 535 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 594

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++E LSL+REM+ +GIKP+ + Y+ +  GLF+  +   A   F EM   G+A D  T
Sbjct: 595 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICT 654

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + GL KN    EA+ LF+ LR +  +++I   N +IDG+ ++ R++ A +LF S+ 
Sbjct: 655 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 714

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVPNVVTY+IMI  L  +G +++A D+F  M+     P+    + ++   ++ NE  
Sbjct: 715 RSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 774

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +    L K+ E+    +     ++VDL 
Sbjct: 775 RAGAYLSKIDERNFSLEHLTAMLLVDLF 802



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 180/587 (30%), Positives = 280/587 (47%), Gaps = 62/587 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----------------- 79
            REG    + P EA  + D + R   +P      N  LA+LA+                 
Sbjct: 51  VREG---TLRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVAL 106

Query: 80  -NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            N+          L P  +TY IL++C  +  R  L    FG++LR+    N    N L+
Sbjct: 107 FNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLL 166

Query: 139 KGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           +G     R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L   MA G  
Sbjct: 167 EGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-- 224

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN- 256
             G VC PN V Y+T+IDG  KEG V+KA  LF +M    I PD+VTYNS++H LC A  
Sbjct: 225 --GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 282

Query: 257 ----------------------------------DWNEAKRLFIEMMDQGVQPSVVTFNV 282
                                              W EA R+F EM    + P VVT ++
Sbjct: 283 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 342

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  K+ EA  + D M  +G  P+  +YN +++G+   G +    +LF  M   G
Sbjct: 343 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 402

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A+
Sbjct: 403 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 462

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + F++M   GVA D   Y   I G C +G +++A EL   +      LDI  ++ +I+ L
Sbjct: 463 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F    +  L P+ V Y++++ G C  G+M+KA  +F  M      P+V
Sbjct: 523 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 582

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +  L++G+ +I    +   L  +M ++ + P   + SI++D L +
Sbjct: 583 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 629



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 263/526 (50%), Gaps = 17/526 (3%)

Query: 55  DYMLRMHPS-----PPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           D +LRM         P V ++N ++    K    NK  D    +   G+ P+L TYN ++
Sbjct: 215 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 274

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   +        +++     PN  T+N+LI G  +  +  EA  +F +++     
Sbjct: 275 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 334

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+T + L+  LC+ G    A ++F+ MA   G+      P+  +Y+ +++G   +G +
Sbjct: 335 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSYNIMLNGYATKGCL 388

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
                LF  M  + I PD  T+N LI    +    ++A  +F EM D GV+P VVT+  +
Sbjct: 389 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 448

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+  KMD+A    + M+ +GV P+   YN L+ GFC  G + +A+EL   + + G 
Sbjct: 449 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 508

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V ++ +IN  CK   V +A +++   V+ G+ P  V Y+ L  G   + ++E AL+
Sbjct: 509 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 568

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FD M   G+  +   Y T ++G CK G I E + LFR +     +     Y+ +IDGL 
Sbjct: 569 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 628

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++GR   A   F  +    +  ++ TYNI+++GL  +   D+A  LF ++       ++I
Sbjct: 629 QAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 688

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T + +I G  +     +  +L   +   +++P+    SI++  L+K
Sbjct: 689 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIK 734



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 182/399 (45%), Gaps = 13/399 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  IF+ M R H   P V ++  ++A+L +    D  +         G+ P+ Y YN 
Sbjct: 424 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  FC  G +         I+ +    +   F+S+I  L    R+M+A  +F      G
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ + Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVVYCTLVNGYCKIG 596

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+  +LF +M    I P  + Y+ +I GL  A     AK  F EM + G+   + T+N
Sbjct: 597 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYN 656

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  L KNR  DEA  L   +    V+ N  T NT++DG     ++  A++LF S+   
Sbjct: 657 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 716

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               + V+Y+I+I    K   VEEA  ++  M + G +P     N +   L + +++  A
Sbjct: 717 RLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
                ++     + +  T    +D     G   E +   
Sbjct: 777 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 159/467 (34%), Positives = 261/467 (55%), Gaps = 22/467 (4%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++Y++NILI CFC   ++      FG++ +  F P   TFN+L+ GL  E R+ EA  LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++    C+PNV+T+ TL+NGLCR G  + A+ L + M     E G+  +PN +TY TI+
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMV----EDGL--QPNQITYGTIV 123

Query: 215 DGLCKEGFVDKAKALFLQMKD-ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           DG+CK G    A  L  +M++  +I PDVV Y+++I GL       +A+ LFIEM D+G+
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P +VT++ +++  C + K  EA RLL  M+ R + P+  T++ L++     G +N A++
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-----------GIKPTV 382
           L   M S G   + V+ N L++G C + ++++AL +++ M              G++P V
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            TYN L  GL    +   A +L++EM   G+  DT TY++ I+GLCK   + EA ++F +
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       +I  +N LI G CK+G +    ELFC +    +V N +TY  +I+G    G 
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           ++ + D+F +M  +   PD IT   ++ G     E  K   +L +++
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/453 (33%), Positives = 243/453 (53%), Gaps = 23/453 (5%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           +FN LIK   + S++  A + F KL   G  P ++T+NTL++GLC       AL+LF +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     CKPN VT++T+++GLC+EG V +A AL  +M ++ + P+ +TY +++ G+
Sbjct: 77  ----------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 253 CHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           C   D   A  L  +M +   ++P VV ++ I+D L K+ +  +A  L   M  +G+ P+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TY+ +++GFC  GK + A+ L   M       D V+++ LIN   K  ++  A  L +
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-----------DGVAADTRTY 420
           EM+S G+ P VVT NTL  GL +  +++ AL++F  MQ+           +GV  D +TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              I GL   G  +EA EL+  +       D   Y+ +I+GLCK  RL  A ++F S+  
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
               PN+VT+N +I G C  G +D   +LF +M       + IT+  LI GF ++   + 
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 541 VNELLHKMKEKKVMPDA-SIVSIVVDLLVKNEI 572
             ++  +M    V PD  +I +++  L  K E+
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 217/469 (46%), Gaps = 96/469 (20%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  + SFNIL+                 +L   G  P L T+N L++  C   RVS    
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F ++ +    PN  TF +L+ GL  E R++EA AL  ++   G +PN ITY T+++G+C
Sbjct: 72  LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T+ ALNL  +M     E+  + KP+ V YS IIDGL K+G    A+ LF++M+D+ 
Sbjct: 128 KMGDTVSALNLLRKME----ELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 238 INPDVVTYNSLIHGLCHANDW-----------------------------------NEAK 262
           I PD+VTY+ +I+G C +  W                                   N A+
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD---------------------------- 294
            L  EM+  GV P+VVT N ++D LC + K+                             
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 295 ------------------EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
                             EA  L + M  RG+ P+  TY+++++G C   +++ A ++F 
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           SM S     + V++N LI GYCK   V++ L L+ EM  +GI    +TY TL  G  ++ 
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            +  +L +F EM   GV  DT T    + GL     + +A+ +   L++
Sbjct: 423 NINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQM 471



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 214/405 (52%), Gaps = 22/405 (5%)

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           ++ ++N LI   C       AL+ F ++     ++G    P  VT++T++ GLC E  V 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT----KLGF--HPTLVTFNTLLHGLCVEDRVS 67

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  LF QM      P+VVT+ +L++GLC      EA  L   M++ G+QP+ +T+  I+
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 285 DELCKNRKMDEASRLLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           D +CK      A  LL  M +   ++P+   Y+ ++DG    G+   A+ LF  M+  G 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V+Y+ +ING+C + +  EA  L +EM+ + I P VVT++ L   L +   +  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR-----------ILKCELDI 452
           L  EM   GV  +  T  T +DGLC +G + +A+E+F+ ++               E D+
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           Q YN LI GL   G+   A EL+  +PH  +VP+ VTY+ MI GLC   ++D+A  +F  
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           M   + +P+++TF+ LI G+ +        EL  +M  + ++ +A
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANA 408



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 203/396 (51%), Gaps = 16/396 (4%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +++ +I   C    +  A + F ++     +P +VT+N+L+HGLC  +  +EA  LF +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                +P+VVTF  +M+ LC+  ++ EA  LLD MV+ G++PN  TY T++DG C MG  
Sbjct: 77  ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 329 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
             A  L   ME +   K D V Y+ +I+G  K+    +A +L+ EM  KGI P +VTY+ 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G     +   A +L  EM    ++ D  T++  I+ L K G +  A +L + +    
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL-----------VPNVVTYNIMIQG 496
              ++   N L+DGLC SG+LK A E+F ++   ++            P+V TYNI+I G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L N+G+  +A +L+ +M      PD +T+  +I+G  + +   +  ++   M  K   P+
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
               + ++    K  +    L  F    R+G V  +
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANA 408



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 5/159 (3%)

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D  ++   I   C    +  A+  F  L  L     +  +N L+ GLC   R+  A 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF    H +  PNVVT+  ++ GLC +G++ +A  L   M E+   P+ IT+  ++ G 
Sbjct: 71  DLF----HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 533 IRINEPSKVNELLHKMKE-KKVMPDASIVSIVVDLLVKN 570
            ++ +      LL KM+E   + PD  I S ++D L K+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKD 165



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%)

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           L+   DI ++N LI   C   +L FA   F  L      P +VT+N ++ GLC + ++ +
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A DLF  M      P+V+TF  L++G  R     +   LL +M E  + P+      +VD
Sbjct: 69  ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124

Query: 566 LLVK 569
            + K
Sbjct: 125 GMCK 128


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 165/437 (37%), Positives = 239/437 (54%), Gaps = 41/437 (9%)

Query: 15  SAPISAFRS---NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN 71
           S P+  F S   NF S  +HF  L            ++A   F+ +L MHP PP +  F 
Sbjct: 3   SPPLPFFSSSQNNFHSKSLHFNTL------------DDALSSFNRLLHMHP-PPSIVDFA 49

Query: 72  ILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
            LL S+AK KHY T      ++++ G+ PN+YT NILIN FC + RV   F    +IL+ 
Sbjct: 50  KLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKL 109

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
              P+  TF +LI+GL  E +I EA  LF K+   G +PNV+TY TLINGLC+ G+T  A
Sbjct: 110 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 169

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           + L   M  GN      C+P+ V Y++IID LCK+  V +A  LF QM  + I+PD+ TY
Sbjct: 170 IRLLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 223

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            SL+H LC+  +W     L  +M++  + P VV F+ ++D LCK  K+ EA  ++D+M+Q
Sbjct: 224 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 283

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK---- 361
           RGV P+  TY TLMDG CL  +++ A ++F  M   G   D +SY  LIN   K+     
Sbjct: 284 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLV 343

Query: 362 EVEEALSLYREM--VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            ++E + L +E     KG    V+  + + L        E    L +EM    +  +   
Sbjct: 344 SLQEVIGLVKETPDAVKGGAVEVIRKDKMKL-------FEKGRTLLNEMVNSKIMPNVVI 396

Query: 420 YTTFIDGLCKNGYIIEA 436
           ++T +D LCK G ++EA
Sbjct: 397 FSTVVDALCKEGKVMEA 413



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 209/415 (50%), Gaps = 14/415 (3%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P+   F  L+  +          +L T++ +FG  PNV T N LIN  C
Sbjct: 32  SFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFC 91

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                  A ++  ++      + +  +P+  T++T+I GLC EG + +A  LF +M DE 
Sbjct: 92  HLNRVGFAFSVLAKI------LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+VVTY +LI+GLC   + + A RL   M     QP VV +  I+D LCK+R++ EA 
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   MV +G+ P+  TY +L+   C + +      L   M +     D V ++ +++  
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +V EA  +   M+ +G++P VVTY TL  G     +++ A+K+FD M R G A D 
Sbjct: 266 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 325

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF---AWEL 474
            +YTT I+   K+G  +  V L   + ++K   D      +   + +  ++K       L
Sbjct: 326 ISYTTLINAGKKDGGGL--VSLQEVIGLVKETPDAVKGGAV--EVIRKDKMKLFEKGRTL 381

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI-TFDML 528
              + +  ++PNVV ++ ++  LC +G++ +A D+   M +    P+ +  FD +
Sbjct: 382 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTM 436



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 3/366 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V ++ ++  + K        +L  QM    + P+V T N LI+  CH N    A  +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QP   TF  ++  LC   K+ EA  L D M+  G +PN  TY TL++G C 
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G  + A  L  SME   C+ D V Y  +I+  CK+++V EA +L+ +MV +GI P + T
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   L  + + +H   L ++M    +  D   ++T +D LCK G + EA E+   + 
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ-GLCNDGQM 503
               E D+  Y  L+DG C    +  A ++F  +      P+V++Y  +I  G  + G +
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGL 342

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
              +++   ++E   A      +++    +++ E  +   LL++M   K+MP+  I S V
Sbjct: 343 VSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRT--LLNEMVNSKIMPNVVIFSTV 400

Query: 564 VDLLVK 569
           VD L K
Sbjct: 401 VDALCK 406



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 160/339 (47%), Gaps = 5/339 (1%)

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
           H N  ++A   F  ++     PS+V F  ++  + K +       L   M   GV PN  
Sbjct: 22  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 81

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T N L++ FC + ++  A  +   +  +G + D  ++  LI G C   ++ EAL L+ +M
Sbjct: 82  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 141

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           + +G +P VVTY TL  GL ++     A++L   M++     D   YT+ ID LCK+  +
Sbjct: 142 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 201

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  LF  +       DI  Y  L+  LC     K    L   + +  ++P+VV ++ +
Sbjct: 202 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 261

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +  LC +G++ +A ++   M +    PDV+T+  L+ G    +E  +  ++   M  K  
Sbjct: 262 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 321

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            PD    + +++   K+   L SL     QE  G V E+
Sbjct: 322 APDVISYTTLINAGKKDGGGLVSL-----QEVIGLVKET 355


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 182/568 (32%), Positives = 289/568 (50%), Gaps = 47/568 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F  M++    PP   +++ ++ +L K +  D       ++   G
Sbjct: 231 KEGDVN-----KACDLFKEMVQ-RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN +TYN LI  +   G+       F  + R    P+  T + L+  L    +I EA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------- 197
            +F  +   G  PNV +Y  ++NG    G  +   +LF+ M  G+G              
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKA 403

Query: 198 ------------------EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                             + GV  KP+ VTY T+I  LC+ G +D A   F QM D+ + 
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGV--KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD   Y+ LI G C      +AK L  E+M+ G+   +V F+ I++ LCK  ++ +A  +
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            DL V  G+ P A  Y+ LMDG+CL+GK+ +A  +F +M S G + +DV Y  L+NGYCK
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++E LSL+REM+ KGIKP+ + YN +  GLFE  +   A   F EM   G+A +  T
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + GL KN    EA+ LF+ LR +  +++I   N +I G+ ++ R++ A +LF S+ 
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASIS 701

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVP VVTY+IMI  L  +G +++A D+F  M+     PD    + ++   ++ NE  
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +    L K+ E+    +     ++VDL 
Sbjct: 762 RAGAYLSKIDERNFSLEHLTTMLLVDLF 789



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 179/585 (30%), Positives = 275/585 (47%), Gaps = 62/585 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----------------- 79
            REG    + P EA  + D + R   +P      N  LA+LA+                 
Sbjct: 38  VREG---TLRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVAL 93

Query: 80  -NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            N+          L P  +TY IL++C  +  R  L    FG++LR+    N    N L+
Sbjct: 94  FNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLL 153

Query: 139 KGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           KG     R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L   MA G  
Sbjct: 154 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-- 211

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-- 255
             G VC P+ V YST+IDG  KEG V+KA  LF +M    I PD VTY+S++H LC A  
Sbjct: 212 --GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269

Query: 256 ---------------------------------NDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                                              W EA R+F EM    + P VVT ++
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  K+ EA  + D M  +G  PN  +Y  +++G+   G +    +LF  M   G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A+
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + F++M   GVA D   Y   I G C +G +++A EL   +      LDI  ++ +I+ L
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F    +  L P  V Y++++ G C  G+M+KA  +F  M      P+ 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           + +  L++G+ +I    +   L  +M +K + P   + +I++D L
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 244/479 (50%), Gaps = 6/479 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+  TY+ +++  CK   +        +++     PN  T+N+LI G  +  +  EA
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F +++     P+V+T + L+  LC+ G    A ++F+ MA   G+      PN  +Y
Sbjct: 309 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPNVFSY 362

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +++G   +G +     LF  M  + I PD+ T+N LI    +    ++A  +F EM D
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV+P VVT+  ++  LC+  KMD+A    + M+ +GV P+   Y+ L+ GFC  G + +
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+EL   + + G   D V ++ +IN  CK   V +A +++   V+ G+ PT V Y+ L  
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   + ++E AL++FD M   G+  +   Y T ++G CK G I E + LFR +     + 
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               YN +IDGL ++GR   A   F  +    +  N  TYNI+++GL  +   D+A  LF
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLF 662

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++       ++IT + +I G  +     +  +L   +    ++P     SI++  L+K
Sbjct: 663 KELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 181/399 (45%), Gaps = 13/399 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  IF+ M R H   P V ++  ++A+L +    D  +         G+ P+ Y Y+ 
Sbjct: 411 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  FC  G +         I+ +    +   F+S+I  L    R+M+A  +F      G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P  + Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNDVVYGTLVNGYCKIG 583

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+  +LF +M  + I P  + YN +I GL  A     AK  F EM + G+  +  T+N
Sbjct: 584 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYN 643

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  L KNR  DEA  L   +    V+ N  T NT++ G     ++  A++LF S+   
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G     V+Y+I+I    K   VEEA  ++  M + G +P     N +   L + +++  A
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
                ++     + +  T    +D     G   E +   
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 9/338 (2%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P   TY  L+     A+    A   F +++  G++ +++  N ++   C+ ++ DEA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEA- 165

Query: 298 RLLDLMVQR----GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYN 351
             LD+++ R    G  P+  +Y+ L+   C  GK  +A++L   M   G  C  D V+Y+
Sbjct: 166 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I+G+ K  +V +A  L++EMV +GI P  VTY+++   L +   ++ A     +M   
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  +  TY   I G    G   EAV +F+ +R      D+   + L+  LCK G++K A
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++F ++      PNV +Y IM+ G    G +    DLF  M  +  APD+ TF++LI  
Sbjct: 344 RDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 403

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +       K   + ++M++  V PD      V+  L +
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 158/467 (33%), Positives = 261/467 (55%), Gaps = 22/467 (4%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++Y++NILI CFC   ++      FG++ +  F P   TFN+L+ GL  E R+ EA  LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++    C+PNV+T+ TL+NGLCR G  + A+ L + M     E G+  +PN +TY TI+
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMV----EDGL--QPNQITYGTIV 123

Query: 215 DGLCKEGFVDKAKALFLQMKD-ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           DG+CK G    A  L  +M++  +I PDVV Y+++I GL       +A+ LFIEM D+G+
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P +VT++ +++  C + K  EA RLL  M+ R + P+  T++ L++     G +N A++
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-----------GIKPTV 382
           L   M S G   + V+ N L++G C + ++++AL +++ M              G++P V
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            TYN L  GL    +   A +L++EM   G+  DT TY++ I+GLCK   + EA ++F +
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       +I  +N LI G CK+G +    ELFC +    +V N +TY  +I+G    G 
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           ++ + D+F +M  +   PD IT   ++ G     E  +   +L +++
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/453 (33%), Positives = 243/453 (53%), Gaps = 23/453 (5%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           +FN LIK   + S++  A + F KL   G  P ++T+NTL++GLC       AL+LF +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     CKPN VT++T+++GLC+EG V +A AL  +M ++ + P+ +TY +++ G+
Sbjct: 77  ----------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 253 CHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           C   D   A  L  +M +   ++P VV ++ I+D L K+ +  +A  L   M  +G+ P+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TY+ +++GFC  GK + A+ L   M       D V+++ LIN   K  ++  A  L +
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-----------DGVAADTRTY 420
           EM+S G+ P VVT NTL  GL +  +++ AL++F  MQ+           +GV  D +TY
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              I GL   G  +EA EL+  +       D   Y+ +I+GLCK  RL  A ++F S+  
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
               PN+VT+N +I G C  G +D   +LF +M       + IT+  LI GF ++   + 
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 541 VNELLHKMKEKKVMPDA-SIVSIVVDLLVKNEI 572
             ++  +M    V PD  +I +++  L  K E+
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 216/469 (46%), Gaps = 96/469 (20%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  + SFNIL+                 +L   G  P L T+N L++  C   RVS    
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F ++ +    PN  TF +L+ GL  E R++EA AL  ++   G +PN ITY T+++G+C
Sbjct: 72  LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T+ ALNL  +M     E+  + KP+ V YS IIDGL K+G    A+ LF++M+D+ 
Sbjct: 128 KMGDTVSALNLLRKME----ELSHI-KPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182

Query: 238 INPDVVTYNSLIHGLCHANDW-----------------------------------NEAK 262
           I PD+VTY+ +I+G C +  W                                   N A+
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD---------------------------- 294
            L  EM+  GV P+VVT N ++D LC + K+                             
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302

Query: 295 ------------------EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
                             EA  L + M  RG+ P+  TY+++++G C   +++ A ++F 
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           SM S     + V++N LI GYCK   V++ L L+ EM  +GI    +TY TL  G  ++ 
Sbjct: 363 SMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            +  +L +F EM   GV  DT T    + GL     +  A+ +   L++
Sbjct: 423 NINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQM 471



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 214/405 (52%), Gaps = 22/405 (5%)

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           ++ ++N LI   C       AL+ F ++     ++G    P  VT++T++ GLC E  V 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT----KLGF--HPTLVTFNTLLHGLCVEDRVS 67

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  LF QM      P+VVT+ +L++GLC      EA  L   M++ G+QP+ +T+  I+
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 285 DELCKNRKMDEASRLLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           D +CK      A  LL  M +   ++P+   Y+ ++DG    G+   A+ LF  M+  G 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V+Y+ +ING+C + +  EA  L +EM+ + I P VVT++ L   L +   +  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR-----------ILKCELDI 452
           L  EM   GV  +  T  T +DGLC +G + +A+E+F+ ++               E D+
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           Q YN LI GL   G+   A EL+  +PH  +VP+ VTY+ MI GLC   ++D+A  +F  
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           M   + +P+++TF+ LI G+ +        EL  +M  + ++ +A
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANA 408



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 203/396 (51%), Gaps = 16/396 (4%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +++ +I   C    +  A + F ++     +P +VT+N+L+HGLC  +  +EA  LF +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                +P+VVTF  +M+ LC+  ++ EA  LLD MV+ G++PN  TY T++DG C MG  
Sbjct: 77  ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 329 NRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
             A  L   ME +   K D V Y+ +I+G  K+    +A +L+ EM  KGI P +VTY+ 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G     +   A +L  EM    ++ D  T++  I+ L K G +  A +L + +    
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL-----------VPNVVTYNIMIQG 496
              ++   N L+DGLC SG+LK A E+F ++   ++            P+V TYNI+I G
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L N+G+  +A +L+ +M      PD +T+  +I+G  + +   +  ++   M  K   P+
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
               + ++    K  +    L  F    R+G V  +
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANA 408



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 5/159 (3%)

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D  ++   I   C    +  A+  F  L  L     +  +N L+ GLC   R+  A 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF    H +  PNVVT+  ++ GLC +G++ +A  L   M E+   P+ IT+  ++ G 
Sbjct: 71  DLF----HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 533 IRINEPSKVNELLHKMKE-KKVMPDASIVSIVVDLLVKN 570
            ++ +      LL KM+E   + PD  I S ++D L K+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKD 165



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%)

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           L+   DI ++N LI   C   +L FA   F  L      P +VT+N ++ GLC + ++ +
Sbjct: 9   LQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSE 68

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A DLF  M      P+V+TF  L++G  R     +   LL +M E  + P+      +VD
Sbjct: 69  ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124

Query: 566 LLVK 569
            + K
Sbjct: 125 GMCK 128


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 185/574 (32%), Positives = 283/574 (49%), Gaps = 31/574 (5%)

Query: 13  FASAPISAFRSNFSSLLVHFRDLTTRE-GDINVITPN--------EAFCIFDYMLRMHPS 63
             +A I+  R N   L   F   ++R   D N++  +         A  IF   +     
Sbjct: 18  ITTATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGV 77

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
            P + ++N ++  L K+            L   G  P++ TYN LI+  CK G +     
Sbjct: 78  APTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARR 137

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE--PNVITYNTLING 175
             G +      PN  T++ LI GL    RI EA  L  ++    C+  PN+ITYN+ ++G
Sbjct: 138 LHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 197

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC+   T  A  L   + +G+  +     P+TVT+ST+IDGLCK G  D+A        D
Sbjct: 198 LCKQSMTAEACELMRSLRDGSLRV----SPDTVTFSTLIDGLCKCGQTDEA------CND 247

Query: 236 ENIN----PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           + I     P+VVTYN+L++GLC A+    A  +   M+D+GV P V+T++V++D  CK  
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++DEA  LL  M  RG  PN  T+N+++DG C   +   A ++   + +     D V++N
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           ILI G CK    E+A +L+ EMV+K ++P V+T+  L  GL +  QVE A  + D M   
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  +  TY   + GLCK+G I E  E    +    C  +   Y  L+  LC++ R   A
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +L   L      P+ VTYNI++ GL   G+ ++A  +  +M      PD  TF     G
Sbjct: 488 LQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGG 547

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             R    +   ELL  +  K ++PDA+  S ++D
Sbjct: 548 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 254/477 (53%), Gaps = 13/477 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAF-GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           YNI++   C+ G  +     F G + R    P   T+N++I GL   + +     LF +L
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+V+TYNTLI+ LC+ G    A  L   M++        C PN VTYS +I+GL
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG------CVPNVVTYSVLINGL 161

Query: 218 CKEGFVDKAKALFLQM--KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG--V 273
           CK G +D+A+ L  +M  K  ++ P+++TYNS + GLC  +   EA  L   + D    V
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 221

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P  VTF+ ++D LCK  + DEA    D M+  G  PN  TYN L++G C   K+ RA  
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +  SM   G   D ++Y++L++ +CK   V+EAL L   M S+G  P VVT+N++  GL 
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  +   A ++  ++    +  D  T+   I G CK G   +A  LF  +     + D+ 
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +  LIDGLCK+G+++ A ++   + +  + PNVVTYN+++ GLC  G++++  +   +M
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +   P+ +T+  L++   R +      +L+ K+K     PD    +I+VD L K+
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 166/306 (54%), Gaps = 13/306 (4%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDL----MVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           SV  +N+++  LC+     E +R L++    M + GV P   TYNT+++G C   ++   
Sbjct: 44  SVADYNIVLQSLCR---AGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAG 100

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            ELF  +   G   D V+YN LI+  CK  ++EEA  L+  M S+G  P VVTY+ L  G
Sbjct: 101 MELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160

Query: 392 LFEIHQVEHALKLFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRTLR--ILK 447
           L ++ +++ A +L  EM R    V  +  TY +F+DGLCK     EA EL R+LR   L+
Sbjct: 161 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 220

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D   ++ LIDGLCK G+   A      +  G  VPNVVTYN ++ GLC   +M++A 
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +   M +    PDVIT+ +L+  F + +   +  ELLH M  +   P+    + ++D L
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338

Query: 568 VKNEIS 573
            K++ S
Sbjct: 339 CKSDRS 344


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 165/498 (33%), Positives = 268/498 (53%), Gaps = 10/498 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++ + GL P + T+N  ++  CK GR       F  +      P+  +++ L+ G   E 
Sbjct: 359 KMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEG 418

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R  +   LF  +   G   N   +N LI+   + G    A+ +F EM  G G      +P
Sbjct: 419 RFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM-QGQG-----VRP 472

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTYST+I   C+ G +  A   F QM    + P+ V Y+SLIHG C   D  +AK L 
Sbjct: 473 DVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELV 532

Query: 266 IEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
            EMM +G+ +P++V F+ I+  LC   ++ +A  + +L++  G RP   T+N+L+DG+CL
Sbjct: 533 SEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCL 592

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +GK+ +A  +  +M S+G + D V+YN L++GYCK+ ++++ L L+REM+ K +KPT VT
Sbjct: 593 VGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 652

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ +  GLF   +   A K+F EM   G A D  TY   + GLC+N    EA+ LF  L 
Sbjct: 653 YSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 712

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            + C+ DI   N +I+ L K  R + A +LF ++    LVPNV TY +MI  L  +G ++
Sbjct: 713 AMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVE 772

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  +F  ME++  AP     + +I   ++  +  K    + K+    +  +AS  S+++
Sbjct: 773 EADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLM 832

Query: 565 DLLV---KNEISLKSLPS 579
            L     K+   +K LP+
Sbjct: 833 SLFSSKGKHREQIKFLPA 850



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/531 (30%), Positives = 263/531 (49%), Gaps = 25/531 (4%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLY-------- 97
           + ++A  +FD +LR   +P    + N  LA+LA+     +  N   L   L+        
Sbjct: 89  STDDAHHLFDELLR-QGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEA 147

Query: 98  ----------TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
                     TY IL++C C+  R  LG   F R+LR+         N+ +K L    R 
Sbjct: 148 GPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRT 207

Query: 148 MEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            EA   L  ++   GC PN I+YNT+I  LC    +  AL++ + MA   G     C P+
Sbjct: 208 DEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR----CSPD 263

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V+++T+I G  K+G V KA  L  +M  + + PDVVTYNS++  LC A   ++A+ +  
Sbjct: 264 VVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLR 323

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+D+GV+P  +T+  I+     +    E++++   M  +G+ P   T+N+ M   C  G
Sbjct: 324 QMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHG 383

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +   AEE+F  M + G   D VSY+IL++GY       +  +L+  M  KGI      +N
Sbjct: 384 RSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFN 443

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L     +   ++ A+ +F EMQ  GV  D  TY+T I   C+ G + +A+E F  +  +
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI 503

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             E +   Y+ LI G C  G L  A EL    +  G+  PN+V ++ +I  LCN+G++  
Sbjct: 504 GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A D+F  +      P ++TF+ LI G+  + +  K   +L  M    + PD
Sbjct: 564 AHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 614



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 258/523 (49%), Gaps = 46/523 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS---CFTPNAATFNSLIKGLH 142
           R++  G  PN  +YN +I   C   R         R+ +    C +P+  +FN++I G  
Sbjct: 217 RMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC-SPDVVSFNTVIHGFF 275

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR------------------------ 178
            +  + +A  L  ++   G EP+V+TYN++++ LC+                        
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335

Query: 179 -----------TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
                      +GH   +  +F +M +     G++  P  VT+++ +  LCK G    A+
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSK----GLI--PGIVTFNSFMSSLCKHGRSKDAE 389

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F  M  +   PD+V+Y+ L+HG      + +   LF  M D+G+  +   FN+++   
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K   MDEA  +   M  +GVRP+  TY+TL+  FC MG++  A E F  M S+G + + 
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGI-KPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           V Y+ LI+G+C + ++ +A  L  EM+SKGI +P +V ++++   L    +V  A  +F+
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFN 569

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            +   G      T+ + IDG C  G + +A  +   +  +  E D+  YN L+ G CKSG
Sbjct: 570 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSG 629

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           ++     LF  + H  + P  VTY+I++ GL + G+   A+ +F +M ++  A D+ T+ 
Sbjct: 630 KIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYK 689

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +L+ G  R +   +   L HK+       D +I++ V++ L K
Sbjct: 690 ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYK 732



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 256/530 (48%), Gaps = 13/530 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V SFN ++    K        N        G+ P++ TYN +++  CK   +    + 
Sbjct: 262 PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELV 321

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++     P+  T+ ++I G        E+A +F K+ + G  P ++T+N+ ++ LC+
Sbjct: 322 LRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCK 381

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G +  A  +F+ M    G +     P+ V+YS ++ G   EG       LF  M D+ I
Sbjct: 382 HGRSKDAEEIFQYMTT-KGHM-----PDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             +   +N LI         +EA  +F EM  QGV+P VVT++ ++   C+  ++ +A  
Sbjct: 436 VANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAME 495

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD-VSYNILINGY 357
               M+  G+ PN   Y++L+ GFC+ G + +A+EL   M S G    + V ++ +I+  
Sbjct: 496 KFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSL 555

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    V +A  ++  ++  G +PT+VT+N+L  G   + ++E A  + D M   G+  D 
Sbjct: 556 CNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDV 615

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + G CK+G I + + LFR +   K +     Y+ ++DGL  +GR   A ++F  
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHE 675

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +       ++ TY I+++GLC +   D+A  LF  +       D+   + +I+   ++  
Sbjct: 676 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRR 735

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + N+L   +    ++P+ S   +++  L+K     ++   F   E+ G
Sbjct: 736 REEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSG 785



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 155/315 (49%), Gaps = 3/315 (0%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE-L 334
           SV T+ ++MD  C+ R+ D        +++ G+R      NT +   C   + + A + L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK--PTVVTYNTLFLGL 392
              M  +GC  + +SYN +I   C +   +EAL + + M  +G +  P VV++NT+  G 
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F+  +V  A  L +EM + GV  D  TY + +D LCK   + +A  + R +     E D 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +I G   SG  K + ++F  +    L+P +VT+N  +  LC  G+   A ++F  
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M      PD++++ +L+HG+      + +N L H M +K ++ +    +I++    K  +
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 573 SLKSLPSFLVQERQG 587
             +++  F   + QG
Sbjct: 455 MDEAMLVFTEMQGQG 469



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 90/232 (38%), Gaps = 59/232 (25%)

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL--------CKNGYIIEAVELFRT 442
           G F      H   LFDE+ R G          F+  L        C NG  +  + LF  
Sbjct: 86  GTFSTDDAHH---LFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPAL-VLALFN- 140

Query: 443 LRILKCE-------LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL------------ 483
            RI + E       L +  Y  L+D  C++ R       F  L    L            
Sbjct: 141 -RICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLK 199

Query: 484 ------------------------VPNVVTYNIMIQGLCNDGQMDKARDLFLDM--EENA 517
                                   VPN ++YN +I+ LC D +  +A D+   M  E   
Sbjct: 200 CLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR 259

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +PDV++F+ +IHGF +  E SK   L+++M +K V PD    + +VD L K
Sbjct: 260 CSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK 311


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 162/491 (32%), Positives = 267/491 (54%), Gaps = 6/491 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +N   + P+ ++Y ILI+   K G+++     F ++L S  TP+   + SLI GL   + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  LF  +   GC P+ +TYN +I+  C+ G    A +L ++M   +G +     P+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIE-DGHV-----PD 114

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+T++DGLCK G V++A  LF +M+     P+  ++N++I GLC  +  ++A ++F 
Sbjct: 115 VVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  + + P   ++ +++D L K  K++EA +L   M+  G+ P+A TYN ++ G CL  
Sbjct: 175 EMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAY 234

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A ELF SM S GC+    ++NILI+ +CK  +++EA  L + M   G  P VVTY+
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYS 294

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  GL  I +V+ A  L ++M +        T  T I GLCK G I EA E+   +   
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 354

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  YN L+ G C++G+ + A EL   +    L PNVVTY  ++ GLC   ++ +A
Sbjct: 355 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +F  M+ +  AP++ T+  LI GF    +     +L  +M    + PD  +   +   
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 474

Query: 567 LVKNEISLKSL 577
           L K+  S ++L
Sbjct: 475 LCKSGRSARAL 485



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 159/474 (33%), Positives = 244/474 (51%), Gaps = 11/474 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNIL 102
           N+A  +F  +L    +P  V+  +++      N   D R     +N  G  P+  TYN++
Sbjct: 27  NDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVI 86

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK G +        +++     P+  T+N+++ GL    R+ EA  LF +++  GC
Sbjct: 87  IDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGC 146

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN  ++NT+I GLC+      A  +F EM   +        P++ +Y  +IDGL K G 
Sbjct: 147 TPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD------IPPDSWSYGILIDGLAKAGK 200

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A  LF +M D  I P  VTYN +IHG+C A   +EA  LF  M  +G +PS  TFN+
Sbjct: 201 LNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK  KMDEA RLL  M   G  P+  TY+TL+ G C + +++ A  L   M    
Sbjct: 261 LIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK   V+ N LI+G CK   ++EA  +   MVS G  P VVTYNTL  G     Q E A 
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M   G+A +  TYT  + GLCK   + EA  +F  ++   C  ++  Y  LI G 
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
           C +G++    +LF  +    + P+ V Y  +   LC  G+  +A ++  +  E+
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/492 (33%), Positives = 249/492 (50%), Gaps = 12/492 (2%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+ IL+  LAK  K  D R     L  +G+ P+   Y  LI+  C           
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + R    P+  T+N +I        + EA  L  K+   G  P+V+TYNT+++GLC+
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    AL LF EM        + C PN  +++TII GLC++  +D+A  +F +M+  +I
Sbjct: 128 SGRVEEALLLFNEMER------LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  +Y  LI GL  A   NEA +LF  M+D G+ PS VT+NV++  +C    +DEA  
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +G RP+  T+N L+D  C  GK++ A  L   M   G   D V+Y+ LI+G C
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
               V++A  L  +MV +  KPTVVT NTL  GL +  +++ A ++ D M   G + D  
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + G C+ G    A EL   +       ++  Y  L+ GLCK+ RL  A  +F  +
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PN+ TY  +I G C+ GQ+D    LF +M     +PD + +  L     +    
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481

Query: 539 SKVNELLHKMKE 550
           ++  E+L + +E
Sbjct: 482 ARALEILREGRE 493



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/497 (31%), Positives = 245/497 (49%), Gaps = 38/497 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++A  +F  M R    P PV+ +N+++ +  K    +       ++   G  P++ TYN 
Sbjct: 62  DDARELFADMNRRGCPPSPVT-YNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++  CK GRV    + F  + R   TPN  + N++I GL  +S+I +A  +F +++A  
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV------------------- 202
             P+  +Y  LI+GL + G    A  LF  M +       V                   
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 203 ----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     C+P+  T++ +ID  CK G +D+A  L  +M D+   PDVVTY++LI GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C     ++A+ L  +M+ +  +P+VVT N ++  LCK  ++ EA  +LD MV  G  P+ 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYNTL+ G C  G+  RA EL   M + G   + V+Y  L++G CK   + EA  ++ +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M S G  P + TY  L LG     QV+  LKLF EM   G++ D   Y T    LCK+G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 433 IIEAVELFRTLR-ILKCE-LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
              A+E+ R  R  L+ E    + Y   +DGL  +G+++ A      +  G  +P     
Sbjct: 481 SARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERC 540

Query: 491 NIMIQGLCNDGQMDKAR 507
             ++ GLC  GQ  +AR
Sbjct: 541 ASLVAGLCKSGQGGEAR 557



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 103/252 (40%), Gaps = 55/252 (21%)

Query: 65  PPVSSFNILLASLAKN---KHYDTRLNA---TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N L+  L K    K     L+A   +G  P++ TYN L++  C+ G+       
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     PN  T+ +L+ GL   +R+ EA  +F ++K+ GC PN+ TY  LI G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 179 TGHTMIALNLFEEMANGNGEIGVVC---KPNTVTYSTIIDGLCKEGFVDKAKALFLQ--- 232
            G     L LF EM         VC    P+ V Y T+   LCK G   +A  +  +   
Sbjct: 443 AGQVDGGLKLFGEM---------VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493

Query: 233 -MKDENINPDVVTYN---------------------------------SLIHGLCHANDW 258
            ++ E    +V  +                                  SL+ GLC +   
Sbjct: 494 SLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553

Query: 259 NEAKRLFIEMMD 270
            EA+ +  E+MD
Sbjct: 554 GEARAVLEEIMD 565



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 70/137 (51%)

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D  +Y  LIDGL K+G+L  A +LF  L H  + P+ V Y  +I GLC     D AR+LF
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            DM      P  +T++++I    +     +  +L+ KM E   +PD    + V+D L K+
Sbjct: 69  ADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 571 EISLKSLPSFLVQERQG 587
               ++L  F   ER G
Sbjct: 129 GRVEEALLLFNEMERLG 145


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 178/516 (34%), Positives = 270/516 (52%), Gaps = 86/516 (16%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           NEA  +F +M+   P P  +  F  LL  +AK K +D  +N        G+  +LYT N+
Sbjct: 53  NEALDLFSHMVESRPLPS-IIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+NCFC+  +  L                                   A++   KL   G
Sbjct: 112 LMNCFCQSSQPCL-----------------------------------ASSFLGKLMKLG 136

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP++ T+ +LING C       A+++  +M     E+G+  KP+ V Y+TIID LCK G
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV----EMGI--KPDVVIYTTIIDSLCKNG 190

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A +LF QM++  I PDVV Y SL++GLC++  W +A  L   MM + ++P V+TFN
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K  K+ +A  L + M+Q  + PN  TY +L++G C+ G+++ A ++F  ME+ 
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK 310

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREM---------------------------- 373
           GC  D V+Y  LING+CK K+VE+A+ ++ EM                            
Sbjct: 311 GCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370

Query: 374 -------VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR---DGVAADTRTYTTF 423
                  VS+G+ P + TYN L   L    +V  AL +F++MQ+   DGV  + RTY   
Sbjct: 371 QEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVL 430

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + GLC NG + +A+ +F  ++    ++ I  Y  +I G+CK+G++K A  LFCSLP   +
Sbjct: 431 LHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGV 490

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            PNVVTY  MI GL  +G M +A  LF  M+E+  +
Sbjct: 491 KPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 230/474 (48%), Gaps = 46/474 (9%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ S   P+   F  L+  +    +      L   L+  G   ++ T N L+N  C+
Sbjct: 59  FSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQ 118

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +    +A +   ++     ++G   +P+  T++++I+G C    +++A ++  QM +  I
Sbjct: 119 SSQPCLASSFLGKLM----KLGF--EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVV Y ++I  LC     + A  LF +M + G++P VV +  +++ LC + +  +A  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M++R ++P+  T+N L+D F   GK+  A+EL+  M  M    +  +Y  LING C
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
               ++EA  ++  M +KG  P VV Y +L  G  +  +VE A+K+F EM + G+  +T 
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYTT I G    G    A E+F  +       +I+ YN L+  LC +G++  A  +F  +
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 479 PH----GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE------------------- 515
                 GV  PN+ TYN+++ GLC +G+++KA  +F DM++                   
Sbjct: 413 QKREIDGV-PPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCK 471

Query: 516 ----------------NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
                               P+V+T+  +I G  R     + + L  KMKE  V
Sbjct: 472 AGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 165/307 (53%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y  ++    H+  +NEA  LF  M++    PS++ F  +++ + K +K D    L   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             GV  +  T N LM+ FC   +   A    G +  +G + D  ++  LING+C    +E
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+S+  +MV  GIKP VV Y T+   L +   V++AL LF++M+  G+  D   YT+ +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLC +G   +A  L R +   K + D+  +N LID   K G+L  A EL+  +    + 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PN+ TY  +I GLC +G++D+AR +F  ME     PDV+ +  LI+GF +  +     ++
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 545 LHKMKEK 551
            ++M +K
Sbjct: 339 FYEMSQK 345



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 184/373 (49%), Gaps = 1/373 (0%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           ++A  LF  M +    P ++ +  L++ +     ++    L   +   GV   + T N++
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           M+  C++ +   AS  L  +++ G  P+  T+ +L++GFCL  +I  A  +   M  MG 
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K D V Y  +I+  CKN  V+ ALSL+ +M + GI+P VV Y +L  GL    +   A  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L   M +  +  D  T+   ID   K G +++A EL+  +  +    +I  Y  LI+GLC
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             GRL  A ++F  +      P+VV Y  +I G C   +++ A  +F +M +     + I
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL-V 582
           T+  LI GF  + +P+   E+   M  + V P+    ++++  L  N    K+L  F  +
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 583 QERQGEVGESNVK 595
           Q+R+ +    N++
Sbjct: 413 QKREIDGVPPNIR 425



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 1/218 (0%)

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL NG   + +  EAL L+  MV     P+++ +  L   + ++ + +  + L   +Q  
Sbjct: 42  ILRNGL-HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM 100

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV+ D  T    ++  C++     A      L  L  E DI  +  LI+G C   R++ A
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +   +    + P+VV Y  +I  LC +G +D A  LF  ME     PDV+ +  L++G
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                     + LL  M ++K+ PD    + ++D  VK
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVK 258


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 180/568 (31%), Positives = 290/568 (51%), Gaps = 47/568 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F  M++    PP + +++ ++ +L K +  D       ++   G
Sbjct: 233 KEGDVN-----KACDLFKEMVQ-RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P+ +TYN LI  +   G+       F  + R    P+    N+L+  L    +I EA 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------- 197
            +F  +   G  P+V +Y  ++NG    G  +   +LF+ M  G+G              
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKA 405

Query: 198 ------------------EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                             + GV  KP+ VTY T+I  LC+ G +D A   F QM D+ + 
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGV--KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD   Y+ LI G C      +AK L  E+M+ G++  +V F  I++ LCK  ++ +A  +
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNI 523

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            DL V  G+ P+A  YN LMDG+CL+GK+ +A  +F +M S G + + V Y  L+NGYCK
Sbjct: 524 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 583

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++E LSL+REM+ KGIKP+ + YN +  GLFE  +   A   F EM   G+A +  T
Sbjct: 584 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y+  + GL KN    EA+ LF+ LR +  ++DI   N +I G+ ++ R++ A +LF S+ 
Sbjct: 644 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 703

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVP  VTY+IMI  L  +G +++A D+F  M+     PD    + ++   ++ NE  
Sbjct: 704 RSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 763

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +    L K+ E+    +     ++VDL 
Sbjct: 764 RAGAYLSKIDERNFSLEHLTAMLLVDLF 791



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 180/585 (30%), Positives = 276/585 (47%), Gaps = 62/585 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----------------- 79
            REG    + P EA  + D + R   +P      N  LA+LA+                 
Sbjct: 40  VREG---TLRPEEAHDLLDELQR-RGTPVLDRDLNGFLAALARAPSSAACGSGPALAVAL 95

Query: 80  -NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            N+          L P  YTY IL++C  +  R  L    FG++LR+    +A   + L+
Sbjct: 96  FNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLL 155

Query: 139 KGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           KG     R  EA   L  +    GC P+V +YN L+  LC  G +  A +L   MA G  
Sbjct: 156 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG-- 213

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-- 255
             G VC P+ V Y+T+IDG  KEG V+KA  LF +M    I PD+VTY+S++H LC A  
Sbjct: 214 --GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARA 271

Query: 256 ---------------------------------NDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                                              W EA R+F EM  Q + P VV  N 
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  K+ EA  + D M  +G  P+  +Y  +++G+   G +    +LF  M   G
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A+
Sbjct: 392 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + F++M   GV  D   Y   I G C +G +++A EL   +      LDI  +  +I+ L
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F    +  L P+ V YN+++ G C  G+M+KA  +F  M      P+V
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           + +  L++G+ +I    +   L  +M +K + P   + +I++D L
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 262/526 (49%), Gaps = 17/526 (3%)

Query: 55  DYMLRMHPS-----PPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           D +LRM         P V ++N ++    K    NK  D    +   G+ P+L TY+ ++
Sbjct: 204 DDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVV 263

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   +        +++     P+  T+N+LI G  +  +  EA  +F +++     
Sbjct: 264 HALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 323

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+  NTL+  LC+ G    A ++F+ MA   G+      P+  +Y+ +++G   +G +
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSYTIMLNGYATKGCL 377

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
                LF  M  + I PD+ T+N LI    +    ++A  +F EM D GV+P VVT+  +
Sbjct: 378 VDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTV 437

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+  KMD+A    + M+ +GV P+   Y+ L+ GFC  G + +A+EL   + + G 
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + D V +  +IN  CK   V +A +++   V+ G+ P  V YN L  G   + ++E AL+
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FD M   G+  +   Y T ++G CK G I E + LFR +     +     YN +IDGL 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++GR   A   F  +    +  N  TY+I+++GL  +   D+A  LF ++       D+I
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T + +I G  +     +  +L   +    ++P A   SI++  L+K
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 274/578 (47%), Gaps = 33/578 (5%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           NR+ S A  P     ++++  ++   D  TR        P  A   F  +LR       +
Sbjct: 97  NRAASRAQGPRVLSPTSYTYAILM--DCCTRAH-----RPELALAFFGQLLRTGLRVDAI 149

Query: 68  SSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKIGRVS-----LG 115
            + + LL    + K  D  L+         G  P++++YNIL+   C  G+       L 
Sbjct: 150 IASH-LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
            +A G  + S   P+   +N++I G   E  + +A  LF ++   G  P+++TY+++++ 
Sbjct: 209 MMAEGGTVCS---PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC+      A     +M N     GV+  P+  TY+ +I G    G   +A  +F +M+ 
Sbjct: 266 LCKARAMDKAEAFLRQMVNK----GVL--PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           ++I PDVV  N+L+  LC      EA+ +F  M  +G  P V ++ ++++       + +
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVD 379

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            + L DLM+  G+ P+  T+N L+  +   G +++A  +F  M   G K   V+Y  +I 
Sbjct: 380 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIA 439

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             C+  ++++A+  + +M+ +G+ P    Y+ L  G      +  A +L  E+  +G+  
Sbjct: 440 ALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D   + + I+ LCK G +++A  +F     +    D   YN L+DG C  G+++ A  +F
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++    + PNVV Y  ++ G C  G++D+   LF +M +    P  I ++++I G    
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619

Query: 536 NE--PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               P+KV    H+M E  +  +    SIV+  L KN 
Sbjct: 620 GRTVPAKVK--FHEMTESGIAMNKCTYSIVLRGLFKNR 655



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 181/399 (45%), Gaps = 13/399 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  IF+ M R H   P V ++  ++A+L +    D  +         G+ P+ Y Y+ 
Sbjct: 413 DKAMIIFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  FC  G +         I+ +    +   F S+I  L    R+M+A  +F      G
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ + YN L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVGYGTLVNGYCKIG 585

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+  +LF +M  + I P  + YN +I GL  A     AK  F EM + G+  +  T++
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 645

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  L KNR  DEA  L   +    V+ +  T NT++ G     ++  A++LF S+   
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G     V+Y+I+I    K   VEEA  ++  M + G +P     N +   L + +++  A
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
                ++     + +  T    +D     G   E +   
Sbjct: 766 GAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 180/568 (31%), Positives = 292/568 (51%), Gaps = 47/568 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F  M++    PP + ++N ++ +L K +  D       ++    
Sbjct: 231 KEGDVN-----KACDLFKEMVQ-RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN +TYN LI  +   G+       F  + R    P+  T + L+  L    +I EA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------- 197
            +F  +   G  P+V +YN ++NG    G  +   +LF+ M  G+G              
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKA 403

Query: 198 ------------------EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                             + GV  KP+ VTY T+I  LC+ G +D A   F QM D+ + 
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGV--KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD   YN LI G C      +AK L  E+M+ G+   +V F+ I++ LCK  ++ +A  +
Sbjct: 462 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            DL V  G+ P+A  Y+ LMDG+CL+GK+ +A  +F +M S G + + V Y  L+NGYCK
Sbjct: 522 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 581

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++E LSL+REM+ +GIKP+ + Y+ +  GLF+  +   A   F EM   G+A D  T
Sbjct: 582 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICT 641

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + GL KN    EA+ LF+ LR +  +++I   N +IDG+ ++ R++ A +LF S+ 
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 701

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVP+VVTY+IMI  L  +G +++A D+F  M+     P+    + ++   ++ NE  
Sbjct: 702 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 761

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +    L K+ E+    +     ++VDL 
Sbjct: 762 RAGAYLSKIDERNFSLEHLTTMLLVDLF 789



 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 180/587 (30%), Positives = 280/587 (47%), Gaps = 62/587 (10%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----------------- 79
            REG    + P EA  + D + R   +P      N  LA+LA+                 
Sbjct: 38  VREG---TLRPEEAHDLLDELQR-RGTPVLERDLNGFLAALARAPSSAACRSGPALAVAL 93

Query: 80  -NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            N+          L P  +TY IL++C  +  R  L    FG++LR+    N    N L+
Sbjct: 94  FNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLL 153

Query: 139 KGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           +G     R  EA   L  +    GC P+V +Y+ L+  LC  G +  A +L   MA G  
Sbjct: 154 EGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG-- 211

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-- 255
             G VC PN V Y+T+IDG  KEG V+KA  LF +M    I PD+VTYNS++H LC A  
Sbjct: 212 --GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARA 269

Query: 256 ---------------------------------NDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                                              W EA R+F EM    + P VVT ++
Sbjct: 270 MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  K+ EA  + D M  +G  P+  +YN +++G+   G +    +LF  M   G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A+
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + F++M   GVA D   Y   I G C +G +++A EL   +      LDI  ++ +I+ L
Sbjct: 450 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GR+  A  +F    +  L P+ V Y++++ G C  G+M+KA  +F  M      P+V
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 569

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +  L++G+ +I    +   L  +M ++ + P   + SI++D L +
Sbjct: 570 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 616



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 262/526 (49%), Gaps = 17/526 (3%)

Query: 55  DYMLRMHPS-----PPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           D +LRM         P V ++N ++    K    NK  D    +   G+ P+L TYN ++
Sbjct: 202 DDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 261

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   +        +++     PN  T+N+LI G  +  +  EA  +F +++     
Sbjct: 262 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 321

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+T + L+  LC+ G    A ++F+ MA   G+      P+  +Y+ +++G   +G +
Sbjct: 322 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSYNIMLNGYATKGCL 375

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
                LF  M  + I PD  T+N LI    +    ++A  +F EM D GV+P VVT+  +
Sbjct: 376 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 435

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+  KMD+A    + M+ +GV P+   YN L+ GFC  G + +A+EL   + + G 
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 495

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D V ++ +IN  CK   V +A +++   V+ G+ P  V Y+ L  G   + ++E AL+
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 555

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FD M   G+  +   Y T ++G CK G I E + LFR +     +     Y+ +IDGL 
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++GR   A   F  +    +  ++ TYNI+++GL  +   D+A  LF ++       ++I
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T + +I G  +     +  +L   +   +++P     SI++  L+K
Sbjct: 676 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 721



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 181/399 (45%), Gaps = 13/399 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  IF+ M R H   P V ++  ++A+L +    D  +         G+ P+ Y YN 
Sbjct: 411 DKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  FC  G +         I+ +    +   F+S+I  L    R+M+A  +F      G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ + Y+ L++G C  G    AL +F+ M +   E      PN V Y T+++G CK G
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVVVYCTLVNGYCKIG 583

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+  +LF +M    I P  + Y+ +I GL  A     AK  F EM + G+   + T+N
Sbjct: 584 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYN 643

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  L KNR  DEA  L   +    V+ N  T NT++DG     ++  A++LF S+   
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 703

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
                 V+Y+I+I    K   VEEA  ++  M + G +P     N +   L + +++  A
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
                ++     + +  T    +D     G   E +   
Sbjct: 764 GAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 182/541 (33%), Positives = 263/541 (48%), Gaps = 49/541 (9%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVS----- 113
           P VS+FNIL+ +L +             +   GL P+  T+  ++  F + G +      
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252

Query: 114 --------------------LGFIAFGRI-----------LRSCFTPNAATFNSLIKGLH 142
                                GF   GRI           LR  F P+  TFN L+ GL 
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLS 312

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               +  A  +   +   G +P++ TYN+LI+GLC+ G    A+ +  +M   +      
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD------ 366

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C PNTVTY+TII  LCKE  V++A  L L +  + I PDV TYNSLI GLC + +   A 
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            L+ EM  +G  P   T+N+++D LC   K+ EA  LL  M   G   N  TYNTL+DGF
Sbjct: 427 ELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGF 486

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   +I  AEE+F  ME  G   + V+YN LI+G CK++ VEEA  L  +M+ +G++P  
Sbjct: 487 CKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDK 546

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            TYN+L     +   ++ A  +   M  DG   D  TY T I GLCK G +  A +L RT
Sbjct: 547 FTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRT 606

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN-DG 501
           +++    L   AYN +I  L +  R K A  LF  +      P+ VTY I+ +GLC   G
Sbjct: 607 IQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGG 666

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            + +A D  ++M E    P+  +F ML  G   +     + +L+  + EK    D  +  
Sbjct: 667 PIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVTM 726

Query: 562 I 562
           I
Sbjct: 727 I 727



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 149/475 (31%), Positives = 252/475 (53%), Gaps = 5/475 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G+ P++ T+NILI   C+  ++    +    +      P+  TF ++++G   E  + 
Sbjct: 188 SRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLD 247

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  +  ++   GC    +T N L+NG C+ G    AL   EEM+   G       P+  
Sbjct: 248 GAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF-----PDKY 302

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T++ +++GL K G V  A  +   M  E  +PD+ TYNSLI GLC   + +EA ++  +M
Sbjct: 303 TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +++   P+ VT+N I+  LCK  +++EA++L  ++  +G+ P+ CTYN+L+ G CL    
Sbjct: 363 IERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNH 422

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A EL+  M++ GC  D+ +YN+LI+  C   +++EAL+L +EM   G    V+TYNTL
Sbjct: 423 TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTL 482

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +  ++  A ++FD+M+  GV+ ++ TY T IDGLCK+  + EA +L   + +   
Sbjct: 483 IDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGL 542

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D   YN L+   CK+G +K A ++  ++      P++VTY  +I GLC  G+++ A  
Sbjct: 543 RPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATK 602

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           L   ++          ++ +I    R     +   L  +M EK   PDA    IV
Sbjct: 603 LLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 243/491 (49%), Gaps = 7/491 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  N + YN L+N      ++ L  IA   ++     P+ +TFN LIK L    +I  A
Sbjct: 155 GVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPA 214

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  +++ FG  P+  T+ T++ G    G+   A+ + E+M          C    VT 
Sbjct: 215 ILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG------CVVTNVTV 268

Query: 211 STIIDGLCKEGFVDKAKALFLQMK-DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           + +++G CKEG +++A     +M   E   PD  T+N L++GL        A  +   M+
Sbjct: 269 NVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMML 328

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P + T+N ++  LCK  ++DEA ++L+ M++R   PN  TYNT++   C   ++ 
Sbjct: 329 REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVE 388

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A +L   +   G   D  +YN LI G C ++    A+ LY+EM +KG  P   TYN L 
Sbjct: 389 EATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLI 448

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L    +++ AL L  EM+  G A +  TY T IDG CKN  I EA E+F  + +    
Sbjct: 449 DSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVS 508

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +   YN LIDGLCKS R++ A +L   +    L P+  TYN ++   C  G + KA D+
Sbjct: 509 RNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADI 568

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M  +   PD++T+  LI G  +        +LL  ++ K +       + V+  L +
Sbjct: 569 VQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFR 628

Query: 570 NEISLKSLPSF 580
            + S +++  F
Sbjct: 629 RKRSKEAVRLF 639



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 176/344 (51%), Gaps = 1/344 (0%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN L++ L   N     +     M+ +G++P V TFN+++  LC+  ++  A  L++ M 
Sbjct: 163 YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEME 222

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             G+ P+  T+ T+M GF   G ++ A  +   M   GC   +V+ N+L+NG+CK   +E
Sbjct: 223 DFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIE 282

Query: 365 EALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           EAL    EM + +G  P   T+N L  GL +   V+HAL++ D M R+G   D  TY + 
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I GLCK G + EAV++   +    C  +   YN +I  LCK  +++ A +L   L    +
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+V TYN +IQGLC       A +L+ +M+     PD  T++MLI       +  +   
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LL +M+      +    + ++D   KN+   ++   F   E QG
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQG 506



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 21/314 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N+L+ SL         LN       +G   N+ TYN LI+ FCK  R++     
Sbjct: 439 PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEI 498

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++     + N+ T+N+LI GL    R+ EA+ L  ++   G  P+  TYN+L+   C+
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCK 558

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF--LQMKDE 236
            G    A ++ + MA+        C+P+ VTY T+I GLCK G V+ A  L   +QMK  
Sbjct: 559 AGDIKKAADIVQTMASDG------CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK-NRKMDE 295
           N+ P    YN +I  L       EA RLF EM+++   P  VT+ ++   LC+    + E
Sbjct: 613 NLTPHA--YNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGE 670

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG-SMESMGCKHDDVSYNILI 354
           A   +  M++RG  P   ++  L +G   +  +    +L    ME      ++V+   +I
Sbjct: 671 AVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVT---MI 727

Query: 355 NGYCKNKEVEEALS 368
            G+ K  + ++AL+
Sbjct: 728 RGFLKISKYQDALA 741



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 156/333 (46%), Gaps = 8/333 (2%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV---TFNVIMD 285
            +   K  N  P    +  ++H L  A +++  K +  EM    +  SV+   +  V ++
Sbjct: 76  FYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM---KISLSVIDNDSLLVFIE 132

Query: 286 ELCKNRKMDEASRLLDLM-VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
                   +E  + +D M V+ GV  N   YN L++      K+   E    +M S G +
Sbjct: 133 SYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIR 192

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D  ++NILI   C+  ++  A+ L  EM   G+ P   T+ T+  G  E   ++ A+++
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLC 463
            ++M   G      T    ++G CK G I EA+     + + +    D   +N L++GL 
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLS 312

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K+G +K A E+   +      P++ TYN +I GLC  G++D+A  +   M E   +P+ +
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTV 372

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           T++ +I    + N+  +  +L   +  K ++PD
Sbjct: 373 TYNTIISTLCKENQVEEATKLALVLTGKGILPD 405


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 178/568 (31%), Positives = 290/568 (51%), Gaps = 46/568 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+N     +A  +F+ M++   SP  +S++N ++ +L K +  D       ++   G
Sbjct: 228 KEGDVN-----KACDLFNEMVQRGISPD-LSTYNCVVNALCKARAMDKAEAILRQMVDKG 281

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P+ +TYN LI  +   G+         ++      P+  T NSL+  L    +I +A 
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA------------------ 193
            +F  +   G + ++ +Y  ++NG    G  +    LF  M                   
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401

Query: 194 -------------NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                        N   E GV  +P+ VTYST+I  LC+ G +D A   F QM D+ + P
Sbjct: 402 AKCGMLDRATIIFNEMREQGV--EPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAP 459

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            + TY+ LI G C   D  +AK L ++MM++G++P +  FN I++ LCK  ++ +A  + 
Sbjct: 460 SISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF 519

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D  +  G+ PN   YNTLMDG+CL+GK+  A  +F  M S G + + V Y  L+NGYCK 
Sbjct: 520 DFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKV 579

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             ++E LSL+RE++ KGIKP+   YN +  GLF+  +   A   F EM   G+A D  TY
Sbjct: 580 GRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTY 639

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  + GL KN    EA+ LF+ L  +  ++DI   N +I G+ +  R++ A +LF S+  
Sbjct: 640 SIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISR 699

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA-APDVITFDMLIHGFIRINEPS 539
             LVP+VVTY+IM+  L  +G +++A D+F  ME      P+    + ++   +   E  
Sbjct: 700 SGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIV 759

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +    L K+ E+    D S  ++++DL 
Sbjct: 760 RAGTYLSKIDERSFSLDHSTTTLLIDLF 787



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 173/571 (30%), Positives = 274/571 (47%), Gaps = 58/571 (10%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY----DTRLNATGLF--------- 93
           P EA  +FD +L    +P P    N  LA+LA+        D    A  LF         
Sbjct: 43  PEEAHDLFDELLH-QATPVPGRQLNGFLAALARAPASAACRDGPALAVALFNRVSRAHGP 101

Query: 94  ----PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
               P L+TY IL++C  +  R  L    FG++L++    +    ++L++GL    R  E
Sbjct: 102 RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAE 161

Query: 150 AA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           A   L  ++   GC P+V +Y  ++  LC    +  A  L   MA G    G VC PN V
Sbjct: 162 ALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG----GAVCLPNAV 217

Query: 209 TYSTIIDGLCKEGFV-----------------------------------DKAKALFLQM 233
            Y+T+IDG  KEG V                                   DKA+A+  QM
Sbjct: 218 AYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQM 277

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
            D+ + PD  TYNSLI+G      W EA R+  +M  QG+ P VVT N +M  LCK+ K+
Sbjct: 278 VDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKI 337

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A  + D M  +G + +  +Y  +++G+   G +    ELF  M S G   D   +N+L
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVL 397

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I  Y K   ++ A  ++ EM  +G++P VVTY+T+   L  I +++ A++ F++M   GV
Sbjct: 398 IKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV 457

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           A    TY   I G C +G +++A +L   +       DI  +N +I+ LCK GR+  A  
Sbjct: 458 APSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQN 517

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           +F       L PNV+ YN ++ G C  G+M+ A  +F  M      P+V+ +  L++G+ 
Sbjct: 518 IFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYC 577

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++    +   L  ++  K + P  ++ +I++
Sbjct: 578 KVGRIDEGLSLFREILHKGIKPSTTLYNIIL 608



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 251/497 (50%), Gaps = 6/497 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+L TYN ++N  CK   +        +++     P+  T+NSLI G  +  +  EA
Sbjct: 246 GISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEA 305

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  K+ + G  P+V+T N+L+  LC+ G    A ++F+ MA   G+     K +  +Y
Sbjct: 306 VRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM-KGQ-----KTDIFSY 359

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
             +++G   +G +     LF  M  + I PD   +N LI         + A  +F EM +
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMRE 419

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           QGV+P VVT++ ++  LC+  KMD+A    + M+ +GV P+  TY+ L+ GFC  G + +
Sbjct: 420 QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK 479

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A++L   M + G + D   +N +IN  CK   V +A +++   +S G+ P V+ YNTL  
Sbjct: 480 AKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMD 539

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   + ++E+AL++FD M   G+  +   Y T ++G CK G I E + LFR +     + 
Sbjct: 540 GYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP 599

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               YN ++ GL ++GR   A   F  +    +  +  TY+I++ GL  +   D+A  LF
Sbjct: 600 STTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLF 659

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            ++       D+ T +++I G  +I    +  +L   +    ++P     SI++  L+K 
Sbjct: 660 KELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKE 719

Query: 571 EISLKSLPSFLVQERQG 587
            +  ++   F   E  G
Sbjct: 720 GLVEEADDMFSSMENAG 736


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 256/486 (52%), Gaps = 48/486 (9%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           R G ++ I   +AF +F  M+   P P  V  F  LL + A  + Y+T      ++   G
Sbjct: 43  RTGFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +  +LY++ ILI+CFC+  R+S      G++++                           
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK--------------------------- 134

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                    G EP+++T+ +L++G C       A +L   M     E      PN V Y+
Sbjct: 135 --------LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVVYN 180

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+IDGLCK G ++ A  L  +M+ + +  DVVTYN+L+ GLC++  W++A R+  +MM +
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P VVTF  ++D   K   +DEA  L   M+Q  V PN  TYN++++G C+ G++  A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           ++ F  M S GC  + V+YN LI+G+CK + V+E + L++ M  +G    + TYNTL  G
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             ++ ++  AL +F  M    V  D  T+   + GLC NG I  A+  F  +R  +  + 
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I AYN +I GLCK+ +++ AWELFC LP   + P+  TY IMI GLC +G   +A +L  
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIR 480

Query: 512 DMEENA 517
            M+E  
Sbjct: 481 RMKEEG 486



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/445 (30%), Positives = 225/445 (50%), Gaps = 8/445 (1%)

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT-KLKAFGCEPNVITY 169
           R    F  F  ++ S   P+   F  L+    A  R  E    F+ K++ +G   ++ ++
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTAT-ANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
             LI+  CR      AL++  +M     E      P+ VT+ +++ G C    +  A +L
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYE------PSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
            + M      P+VV YN+LI GLC   + N A  L  EM  +G+   VVT+N ++  LC 
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           + +  +A+R+L  M++R + P+  T+  L+D F   G ++ A+EL+  M       ++V+
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN +ING C +  + +A   +  M SKG  P VVTYNTL  G  +   V+  +KLF  M 
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
            +G  AD  TY T I G C+ G +  A+++F  +   +   DI  +  L+ GLC +G ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A   F  +        +V YNIMI GLC   +++KA +LF  +      PD  T+ ++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 530 HGFIRINEPSKVNELLHKMKEKKVM 554
            G  +     + +EL+ +MKE+ ++
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 223/427 (52%), Gaps = 10/427 (2%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLC--RTGHTMIALNLFEEMANGNGEIGVVC 203
           R  +A ALF ++      P+++ +  L+      R   T+I  +   E+   + ++    
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL---- 106

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
                +++ +I   C+   +  A ++  +M      P +VT+ SL+HG C  N   +A  
Sbjct: 107 ----YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L I M+  G +P+VV +N ++D LCKN +++ A  LL+ M ++G+  +  TYNTL+ G C
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+ + A  +   M       D V++  LI+ + K   ++EA  LY+EM+   + P  V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN++  GL    ++  A K FD M   G   +  TY T I G CK   + E ++LF+ +
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  DI  YN LI G C+ G+L+ A ++FC +    + P+++T+ I++ GLC +G++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           + A   F DM E+     ++ ++++IHG  + ++  K  EL  ++  + V PDA   +I+
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462

Query: 564 VDLLVKN 570
           +  L KN
Sbjct: 463 ILGLCKN 469



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 148/298 (49%)

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G  H+  + +A  LF EM+     PS+V F  ++      R+ +        M   G+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  ++  L+  FC   +++ A  + G M  +G +   V++  L++G+C    + +A SL 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             MV  G +P VV YNTL  GL +  ++  AL+L +EM++ G+ AD  TY T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G   +A  + R +       D+  +  LID   K G L  A EL+  +    + PN VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           N +I GLC  G++  A+  F  M      P+V+T++ LI GF +     +  +L  +M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 103/218 (47%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L  G+  +   E+A +L+ EMV     P++V +  L      + + E  +    +M+  G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           ++ D  ++T  I   C+   +  A+ +   +  L  E  I  +  L+ G C   R+  A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L   +      PNVV YN +I GLC +G+++ A +L  +ME+     DV+T++ L+ G 
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                 S    +L  M ++ + PD    + ++D+ VK 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 45/184 (24%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L++   K +  D       R++  G   +++TYN LI+ +C++G++ +    
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373

Query: 119 FGRILRSCFTPNAAT-----------------------------------FNSLIKGLHA 143
           F  ++    TP+  T                                   +N +I GL  
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
             ++ +A  LF +L   G +P+  TY  +I GLC+ G    A  L   M     E G++C
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK----EEGIIC 489

Query: 204 KPNT 207
           + N 
Sbjct: 490 QMNA 493


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 170/542 (31%), Positives = 274/542 (50%), Gaps = 36/542 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L+  L K K  D       ++   G+ PN  TYN LI+ +   G        
Sbjct: 257 PNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRV 316

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +  S   P+    NS +  L    RI EA  +F  +   G +P+VI+Y  L++G   
Sbjct: 317 FKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYAT 376

Query: 179 TGHTMIALNLFEEMA---------------NGNGEIGVVCK--------------PNTVT 209
            G      NLF  M                N    +G++ K              P+ +T
Sbjct: 377 AGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIIT 436

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +ST+I   C+ G +D A   F  M D  + PD   Y+ LI G C+  D  +AK L  +M+
Sbjct: 437 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 496

Query: 270 DQGVQPSVVTF-NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +G+ P  + F   I++ LCK  ++ E   ++DL++  G RPN  T+N+L+DG+CL+G +
Sbjct: 497 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 556

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L  SMES+G + D  +YN L++GYCK+  +++AL+L+R+M+ K +  T V+YN +
Sbjct: 557 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 616

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GLF+  +   A ++F EM   G+A    TY T + GLC+N    EA  L   L  +  
Sbjct: 617 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 676

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + DI  +N +I  + K GR + A ELF ++    LVP ++TY +MI  L  +   + A +
Sbjct: 677 KFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADN 736

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  ME+++  PD    + +I   +   E +K    L K+ +K ++P+A+  S+++ L  
Sbjct: 737 LFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFS 796

Query: 569 KN 570
            N
Sbjct: 797 VN 798



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 173/577 (29%), Positives = 280/577 (48%), Gaps = 58/577 (10%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH----YDTRLNATGLF------- 93
           + P++A  +FD +L    +P P    N LL++LA+        D    A  LF       
Sbjct: 122 LGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCA 181

Query: 94  -----PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
                P +YTYNILINC+ +  R  LG   FGR+LR+   P+  ++N+LI G   E  + 
Sbjct: 182 CPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVD 241

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  LF K++  G  PNV+TY++LINGLC+T     A  +  +M      +G   +PN +
Sbjct: 242 KAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM------VGAGVRPNNM 295

Query: 209 TYSTIIDG-----------------------------------LCKEGFVDKAKALFLQM 233
           TY+ +I G                                   LCK G + +A+ +F  M
Sbjct: 296 TYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 355

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             +   PDV++Y +L+HG   A        LF  M+ +GV P    FN +++   +   M
Sbjct: 356 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 415

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D++  + + M ++GV P+  T++T++  FC +G+++ A E F  M   G   D   Y+ L
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 475

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL-GLFEIHQVEHALKLFDEMQRDG 412
           I G C  +++ +A  L  +M+SKGI P  + + T  +  L +  +V     + D +   G
Sbjct: 476 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +  T+ + +DG C  G + EAV L  ++  +  E DI  YN L+DG CK GR+  A 
Sbjct: 536 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 595

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            LF  + H  +    V+YNI++ GL    +   A+++F +M E+  A  + T+  ++ G 
Sbjct: 596 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGL 655

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            R N   + N LL K+    V  D    +IV+  + K
Sbjct: 656 CRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 692



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 194/426 (45%), Gaps = 52/426 (12%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    FN L+ + A+    D  L         G+ P++ T++ +I+ FC++GR+      
Sbjct: 397 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEK 456

Query: 119 FGRILRSCFTPNAATFNSLIKG------------------------------------LH 142
           F  ++ +   P+ A ++ LI+G                                    L 
Sbjct: 457 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 516

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            E R+ E   +   +   G  PN+IT+N+L++G C  G+   A+ L + M +    +GV 
Sbjct: 517 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES----VGV- 571

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
            +P+  TY+T++DG CK G +D A  LF  M  + +    V+YN ++HGL  A     AK
Sbjct: 572 -EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAK 630

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            +F EM++ G+  S+ T+  ++  LC+N   DEA+ LL+ +    V+ +  T+N ++   
Sbjct: 631 EMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 690

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
             +G+   A+ELF ++ + G     ++Y ++I    K +  E+A +L+  M      P  
Sbjct: 691 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 750

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL--- 439
              N +   L    +V  A     ++ + G+  +  T +  I     NG   E ++L   
Sbjct: 751 RILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810

Query: 440 -FRTLR 444
            +R LR
Sbjct: 811 KYRFLR 816



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 3/260 (1%)

Query: 331 AEELFGSMESMGCKHDD---VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           A ELF  M+   C        +YNILIN Y + +  +  L ++  ++  G+ P V +YN 
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  +  +V+ A  LF +M+  G+  +  TY++ I+GLCK   + +A  + R +    
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   YNCLI G   SG  K +  +F  +   +LVP+V   N  +  LC  G++ +AR
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           D+F  M      PDVI++  L+HG+      + ++ L + M  + V+PD  + + +++  
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409

Query: 568 VKNEISLKSLPSFLVQERQG 587
            +  +  KSL  F    +QG
Sbjct: 410 ARLGMMDKSLLMFEDMTKQG 429



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 175/393 (44%), Gaps = 50/393 (12%)

Query: 29  LVHFRDLTTREGDINVITPN---EAFC----------IFDYMLRMHPSPPPVSSFNILLA 75
           L+ F D+T +  + ++IT +    AFC           F++M+     PP  + ++ L+ 
Sbjct: 419 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG-VPPDTAVYSCLIQ 477

Query: 76  S------LAKNKHYDTRLNATGLFPN-LYTYNILINCFCKIGRVSLGFIAFGRILRSCFT 128
                  L K K   + + + G+ P  +  +  +IN  CK GRV+ G      I+ +   
Sbjct: 478 GQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR 537

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN  TFNSL+ G      + EA  L   +++ G EP++ TYNTL++G C+ G    AL L
Sbjct: 538 PNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTL 597

Query: 189 FEEMANGNGEI----------GVVCKPNTV-------------------TYSTIIDGLCK 219
           F +M +    +          G+     T+                   TY+T++ GLC+
Sbjct: 598 FRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCR 657

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
               D+A  L  ++   N+  D++T+N +I  +       EAK LF  +   G+ P+++T
Sbjct: 658 NNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILT 717

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + V++  L K    ++A  L   M +    P++   N ++      G++ +A      ++
Sbjct: 718 YRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKID 777

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             G   +  + ++LI  +  N +  E + L  E
Sbjct: 778 KKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 170/542 (31%), Positives = 274/542 (50%), Gaps = 36/542 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L+  L K K  D       ++   G+ PN  TYN LI+ +   G        
Sbjct: 186 PNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRV 245

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +  S   P+    NS +  L    RI EA  +F  +   G +P+VI+Y  L++G   
Sbjct: 246 FKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYAT 305

Query: 179 TGHTMIALNLFEEMA---------------NGNGEIGVVCK--------------PNTVT 209
            G      NLF  M                N    +G++ K              P+ +T
Sbjct: 306 AGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIIT 365

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +ST+I   C+ G +D A   F  M D  + PD   Y+ LI G C+  D  +AK L  +M+
Sbjct: 366 FSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 425

Query: 270 DQGVQPSVVTF-NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +G+ P  + F   I++ LCK  ++ E   ++DL++  G RPN  T+N+L+DG+CL+G +
Sbjct: 426 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 485

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L  SMES+G + D  +YN L++GYCK+  +++AL+L+R+M+ K +  T V+YN +
Sbjct: 486 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 545

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GLF+  +   A ++F EM   G+A    TY T + GLC+N    EA  L   L  +  
Sbjct: 546 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 605

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + DI  +N +I  + K GR + A ELF ++    LVP ++TY +MI  L  +   + A +
Sbjct: 606 KFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADN 665

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  ME+++  PD    + +I   +   E +K    L K+ +K ++P+A+  S+++ L  
Sbjct: 666 LFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFS 725

Query: 569 KN 570
            N
Sbjct: 726 VN 727



 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 173/578 (29%), Positives = 280/578 (48%), Gaps = 58/578 (10%)

Query: 44  VITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH----YDTRLNATGLF------ 93
            + P++A  +FD +L    +P P    N LL++LA+        D    A  LF      
Sbjct: 50  TLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRC 109

Query: 94  ------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
                 P +YTYNILINC+ +  R  LG   FGR+LR+   P+  ++N+LI G   E  +
Sbjct: 110 ACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEV 169

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
            +A  LF K++  G  PNV+TY++LINGLC+T     A  +  +M      +G   +PN 
Sbjct: 170 DKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM------VGAGVRPNN 223

Query: 208 VTYSTIIDG-----------------------------------LCKEGFVDKAKALFLQ 232
           +TY+ +I G                                   LCK G + +A+ +F  
Sbjct: 224 MTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDS 283

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M  +   PDV++Y +L+HG   A        LF  M+ +GV P    FN +++   +   
Sbjct: 284 MVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 343

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           MD++  + + M ++GV P+  T++T++  FC +G+++ A E F  M   G   D   Y+ 
Sbjct: 344 MDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSC 403

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL-GLFEIHQVEHALKLFDEMQRD 411
           LI G C  +++ +A  L  +M+SKGI P  + + T  +  L +  +V     + D +   
Sbjct: 404 LIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHT 463

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  T+ + +DG C  G + EAV L  ++  +  E DI  YN L+DG CK GR+  A
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDA 523

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             LF  + H  +    V+YNI++ GL    +   A+++F +M E+  A  + T+  ++ G
Sbjct: 524 LTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGG 583

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             R N   + N LL K+    V  D    +IV+  + K
Sbjct: 584 LCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 621



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 194/426 (45%), Gaps = 52/426 (12%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    FN L+ + A+    D  L         G+ P++ T++ +I+ FC++GR+      
Sbjct: 326 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEK 385

Query: 119 FGRILRSCFTPNAATFNSLIKG------------------------------------LH 142
           F  ++ +   P+ A ++ LI+G                                    L 
Sbjct: 386 FNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLC 445

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            E R+ E   +   +   G  PN+IT+N+L++G C  G+   A+ L + M +    +GV 
Sbjct: 446 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES----VGV- 500

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
            +P+  TY+T++DG CK G +D A  LF  M  + +    V+YN ++HGL  A     AK
Sbjct: 501 -EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAK 559

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            +F EM++ G+  S+ T+  ++  LC+N   DEA+ LL+ +    V+ +  T+N ++   
Sbjct: 560 EMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 619

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
             +G+   A+ELF ++ + G     ++Y ++I    K +  E+A +L+  M      P  
Sbjct: 620 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDS 679

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL--- 439
              N +   L    +V  A     ++ + G+  +  T +  I     NG   E ++L   
Sbjct: 680 RILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739

Query: 440 -FRTLR 444
            +R LR
Sbjct: 740 KYRFLR 745



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 3/260 (1%)

Query: 331 AEELFGSMESMGCKHDD---VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           A ELF  M+   C        +YNILIN Y + +  +  L ++  ++  G+ P V +YN 
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  +  +V+ A  LF +M+  G+  +  TY++ I+GLCK   + +A  + R +    
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   YNCLI G   SG  K +  +F  +   +LVP+V   N  +  LC  G++ +AR
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           D+F  M      PDVI++  L+HG+      + ++ L + M  + V+PD  + + +++  
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338

Query: 568 VKNEISLKSLPSFLVQERQG 587
            +  +  KSL  F    +QG
Sbjct: 339 ARLGMMDKSLLMFEDMTKQG 358



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 175/393 (44%), Gaps = 50/393 (12%)

Query: 29  LVHFRDLTTREGDINVITPN---EAFC----------IFDYMLRMHPSPPPVSSFNILLA 75
           L+ F D+T +  + ++IT +    AFC           F++M+     PP  + ++ L+ 
Sbjct: 348 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTG-VPPDTAVYSCLIQ 406

Query: 76  S------LAKNKHYDTRLNATGLFPN-LYTYNILINCFCKIGRVSLGFIAFGRILRSCFT 128
                  L K K   + + + G+ P  +  +  +IN  CK GRV+ G      I+ +   
Sbjct: 407 GQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQR 466

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN  TFNSL+ G      + EA  L   +++ G EP++ TYNTL++G C+ G    AL L
Sbjct: 467 PNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTL 526

Query: 189 FEEMANGNGEI----------GVVCKPNTV-------------------TYSTIIDGLCK 219
           F +M +    +          G+     T+                   TY+T++ GLC+
Sbjct: 527 FRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCR 586

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
               D+A  L  ++   N+  D++T+N +I  +       EAK LF  +   G+ P+++T
Sbjct: 587 NNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILT 646

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + V++  L K    ++A  L   M +    P++   N ++      G++ +A      ++
Sbjct: 647 YRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKID 706

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             G   +  + ++LI  +  N +  E + L  E
Sbjct: 707 KKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 161/491 (32%), Positives = 266/491 (54%), Gaps = 6/491 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +N   + P+ ++Y ILI+   K G+++     F ++L S  TP+   + SLI GL   + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  LF  +   GC P+ +TYN +I+  C+ G    A +L ++M   +G +     P+
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE-DGHV-----PD 114

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+T++DGLCK   V++A  LF +M+     P+  ++N++I GLC  +  ++A ++F 
Sbjct: 115 VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFH 174

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  + + P   ++ +++D L K  K++EA +L   M+  G+ P+A TYN ++ G CL  
Sbjct: 175 EMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAY 234

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A ELF SM S GC+    ++NILI+ +CK  +++EA  L + M   G  P VVTY+
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYS 294

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  GL  I +V+ A  L ++M +        T  T I GLCK G I EA E+   +   
Sbjct: 295 TLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS 354

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  YN L+ G C++G+ + A EL   +    L PNVVTY  ++ GLC   ++ +A
Sbjct: 355 GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +F  M+ +  AP++ T+  LI GF    +     +L  +M    + PD  +   +   
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAE 474

Query: 567 LVKNEISLKSL 577
           L K+  S ++L
Sbjct: 475 LCKSGRSARAL 485



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/474 (33%), Positives = 245/474 (51%), Gaps = 11/474 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNIL 102
           N+A  +F  +L    +P  V+  +++      N   D R     +N  G  P+  TYN++
Sbjct: 27  NDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVM 86

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK G +        +++     P+  T+N+++ GL   SR+ EA  LF +++  GC
Sbjct: 87  IDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGC 146

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN  ++NT+I GLC+      A  +F EM   +        P++ +Y  +IDGL K G 
Sbjct: 147 TPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD------IPPDSWSYGILIDGLAKAGK 200

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A  LF +M D  I P  VTYN +IHG+C A   +EA  LF  M  +G +PS  TFN+
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK  K+DEA RLL  M   G  P+  TY+TL+ G C + +++ A  L   M    
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK   V+ N LI+G CK   ++EA  +   MVS G  P VVTYNTL  G     Q E A 
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M   G+A +  TYT  + GLCK   + EA  +F  ++   C  ++  Y  LI G 
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
           C +G++    +LF  +    + P+ V Y  +   LC  G+  +A ++  +  E+
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/492 (33%), Positives = 249/492 (50%), Gaps = 12/492 (2%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+ IL+  LAK  K  D R     L  +G+ P+   Y  LI+  C           
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + R    P+  T+N +I        + EA  L  K+   G  P+V+TYNT+++GLC+
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +     AL LF EM        + C PN  +++TII GLC++  +D+A  +F +M+ ++I
Sbjct: 128 SSRVEEALLLFNEMER------LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  +Y  LI GL  A   NEA +LF  M+D G+ PS VT+NV++  +C    +DEA  
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +G RP+  T+N L+D  C  GK++ A  L   M   G   D V+Y+ LI+G C
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
               V++A  L  +MV +  KPTVVT NTL  GL +  +++ A ++ D M   G + D  
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + G C+ G    A EL   +       ++  Y  L+ GLCK+ RL  A  +F  +
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM 421

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PN+ TY  +I G C+ GQ+D    LF +M     +PD + +  L     +    
Sbjct: 422 KSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRS 481

Query: 539 SKVNELLHKMKE 550
           ++  E+L + +E
Sbjct: 482 ARALEILREGRE 493



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 247/500 (49%), Gaps = 38/500 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++A  +F  M R    P PV+ +N+++ +  K    +       ++   G  P++ TYN 
Sbjct: 62  DDARELFADMNRRGCPPSPVT-YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++  CK  RV    + F  + R   TPN  + N++I GL  +S+I +A  +F +++A  
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV------------------- 202
             P+  +Y  LI+GL + G    A  LF+ M +       V                   
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 203 ----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     C+P+  T++ +ID  CK G +D+A  L  +M D+   PDVVTY++LI GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C     ++A+ L  +M+ +  +P+VVT N ++  LCK  ++ EA  +LD MV  G  P+ 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYNTL+ G C  G+  RA EL   M + G   + V+Y  L++G CK   + EA  ++ +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M S G  P + TY  L LG     QV+  LKLF EM   G++ D   Y T    LCK+G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 433 IIEAVELFRTLR-ILKCE-LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
              A+E+ R  R  L+ E    + Y   +DGL ++G+++ A      +  G  +P     
Sbjct: 481 SARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERC 540

Query: 491 NIMIQGLCNDGQMDKARDLF 510
             ++ GLC  GQ  +AR + 
Sbjct: 541 ASLVAGLCKSGQGGEARAVL 560



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 103/252 (40%), Gaps = 55/252 (21%)

Query: 65  PPVSSFNILLASLAKN---KHYDTRLNA---TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N L+  L K    K     L+A   +G  P++ TYN L++  C+ G+       
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     PN  T+ +L+ GL   +R+ EA  +F ++K+ GC PN+ TY  LI G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 179 TGHTMIALNLFEEMANGNGEIGVVC---KPNTVTYSTIIDGLCKEGFVDKAKALFLQ--- 232
            G     L LF EM         VC    P+ V Y T+   LCK G   +A  +  +   
Sbjct: 443 AGQVDGGLKLFGEM---------VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493

Query: 233 -MKDENINPDVVTYN---------------------------------SLIHGLCHANDW 258
            ++ E    +V  +                                  SL+ GLC +   
Sbjct: 494 SLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553

Query: 259 NEAKRLFIEMMD 270
            EA+ +  E+MD
Sbjct: 554 GEARAVLEEIMD 565



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 69/137 (50%)

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D  +Y  LIDGL K+G+L  A  LF  L H  + P+ V Y  +I GLC     D AR+LF
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            DM      P  +T++++I    +     +  +L+ KM E   +PD    + V+D L K+
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 571 EISLKSLPSFLVQERQG 587
               ++L  F   ER G
Sbjct: 129 SRVEEALLLFNEMERLG 145


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 256/486 (52%), Gaps = 48/486 (9%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           R G ++ I   +AF +F  M+   P P  V  F  LL + A  + Y+T      ++   G
Sbjct: 43  RTGFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +  +LY++ ILI+CFC+  R+S      G++++                           
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK--------------------------- 134

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                    G EP+++T+ +L++G C       A +L   M     E      PN V Y+
Sbjct: 135 --------LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVVYN 180

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+IDGLCK G ++ A  L  +M+ + +  DVVTYN+L+ GLC++  W++A R+  +MM +
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P VVTF  ++D   K   +DEA  L   M+Q  V PN  TYN++++G C+ G++  A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           ++ F  M S GC  + V+YN LI+G+CK + V+E + L++ M  +G    + TYNTL  G
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             ++ ++  AL +F  M    V  D  T+   + GLC NG I  A+  F  +R  +  + 
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I AYN +I GLCK+ +++ AWELFC LP   + P+  TY IMI GLC +G   +A +L  
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIR 480

Query: 512 DMEENA 517
            M+E  
Sbjct: 481 RMKEEG 486



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/516 (32%), Positives = 267/516 (51%), Gaps = 48/516 (9%)

Query: 17   PISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAS 76
            P ++   +FS    H         +++ I  ++AF +F  ML+  P P  V  F  +L  
Sbjct: 555  PETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTV 613

Query: 77   LAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
            +AK   +D       ++   G+  +LY++ ILI+CFC+  R+SL     G++++      
Sbjct: 614  IAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK------ 667

Query: 131  AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
                                          G  P+++T  +L+NG C+      A++L +
Sbjct: 668  -----------------------------LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 698

Query: 191  EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
             M +G G +     PN V Y+T+I+GLCK   ++ A  +F  M+ + I  D VTYN+LI 
Sbjct: 699  SM-DGFGFV-----PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 752

Query: 251  GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            GL ++  W +A RL  +M+ + + P+V+ F  ++D   K   + EA  L   M++R V P
Sbjct: 753  GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 812

Query: 311  NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
            N  TYN+L++GFC+ G +  A+ +F  M S GC  D V+YN LI G+CK+K VE+ + L+
Sbjct: 813  NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 872

Query: 371  REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             EM  +G+     TYNTL  G  +  ++  A K+F+ M   GV+ D  TY   +D LC N
Sbjct: 873  CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 932

Query: 431  GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            G I +A+ +   L+  + ++DI  YN +I GLC++ +LK AW LF SL    + P+ + Y
Sbjct: 933  GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 992

Query: 491  NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
              MI GLC  G   +A  L   M+E+   P    +D
Sbjct: 993  ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/445 (30%), Positives = 225/445 (50%), Gaps = 8/445 (1%)

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT-KLKAFGCEPNVITY 169
           R    F  F  ++ S   P+   F  L+    A  R  E    F+ K++ +G   ++ ++
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTAT-ANLRRYETVIYFSQKMELYGISHDLYSF 109

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
             LI+  CR      AL++  +M     E      P+ VT+ +++ G C    +  A +L
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYE------PSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
            + M      P+VV YN+LI GLC   + N A  L  EM  +G+   VVT+N ++  LC 
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           + +  +A+R+L  M++R + P+  T+  L+D F   G ++ A+EL+  M       ++V+
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN +ING C +  + +A   +  M SKG  P VVTYNTL  G  +   V+  +KLF  M 
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
            +G  AD  TY T I G C+ G +  A+++F  +   +   DI  +  L+ GLC +G ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A   F  +        +V YNIMI GLC   +++KA +LF  +      PD  T+ ++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 530 HGFIRINEPSKVNELLHKMKEKKVM 554
            G  +     + +EL+ +MKE+ ++
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 229/447 (51%), Gaps = 10/447 (2%)

Query: 115  GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
             F  F  +L+S   P+   F  ++  +   ++      L+ K++  G   ++ ++  LI+
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 175  GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
              CR     +AL L  +M     ++G   +P+ VT  ++++G C+     +A +L   M 
Sbjct: 648  CFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701

Query: 235  DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                 P+VV YN++I+GLC   D N A  +F  M  +G++   VT+N ++  L  + +  
Sbjct: 702  GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761

Query: 295  EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            +A+RLL  MV+R + PN   +  L+D F   G +  A  L+  M       +  +YN LI
Sbjct: 762  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821

Query: 355  NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            NG+C +  + +A  ++  MVSKG  P VVTYNTL  G  +  +VE  +KLF EM   G+ 
Sbjct: 822  NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 881

Query: 415  ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAW 472
             D  TY T I G C+ G +  A ++F   R++ C +  DI  YN L+D LC +G+++ A 
Sbjct: 882  GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939

Query: 473  ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             +   L    +  +++TYNI+IQGLC   ++ +A  LF  +      PD I +  +I G 
Sbjct: 940  VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999

Query: 533  IRINEPSKVNELLHKMKEKKVMPDASI 559
             R     + ++L  +MKE   MP   I
Sbjct: 1000 CRKGLQREADKLCRRMKEDGFMPSERI 1026



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 225/436 (51%), Gaps = 10/436 (2%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC--RTGHTMIALNLFEEMAN 194
           L  G     R  +A ALF ++      P+++ +  L+      R   T+I  +   E+  
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
            + ++         +++ +I   C+   +  A ++  +M      P +VT+ SL+HG C 
Sbjct: 102 ISHDL--------YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
            N   +A  L I M+  G +P+VV +N ++D LCKN +++ A  LL+ M ++G+  +  T
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YNTL+ G C  G+ + A  +   M       D V++  LI+ + K   ++EA  LY+EM+
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
              + P  VTYN++  GL    ++  A K FD M   G   +  TY T I G CK   + 
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           E ++LF+ +       DI  YN LI G C+ G+L+ A ++FC +    + P+++T+ I++
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLC +G+++ A   F DM E+     ++ ++++IHG  + ++  K  EL  ++  + V 
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453

Query: 555 PDASIVSIVVDLLVKN 570
           PDA   +I++  L KN
Sbjct: 454 PDARTYTIMILGLCKN 469



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/567 (24%), Positives = 249/567 (43%), Gaps = 50/567 (8%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILI 103
           A  IF +M+    +P  ++   ILL  L  N   ++ L        +  +  +  YNI+I
Sbjct: 370 ALDIFCWMVSRRVTPDIITHC-ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-- 161
           +  CK  +V   +  F R+      P+A T+  +I GL       EA  L  ++K  G  
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C+ N    +   +    + +  I+L+L E           + +   + +S+ + G  +  
Sbjct: 489 CQMNAEDDHLEEHS---SSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRH 545

Query: 222 FV--------------------------------------DKAKALFLQMKDENINPDVV 243
           ++                                      D A +LF +M      P +V
Sbjct: 546 YLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIV 605

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            +  ++  +   N ++    L+ +M + G+   + +F +++   C+  ++  A  LL  M
Sbjct: 606 DFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKM 665

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           ++ G RP+  T  +L++GFC   +   A  L  SM+  G   + V YN +ING CKN+++
Sbjct: 666 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 725

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
             AL ++  M  KGI+   VTYNTL  GL    +   A +L  +M +  +  +   +T  
Sbjct: 726 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ID   K G ++EA  L++ +       ++  YN LI+G C  G L  A  +F  +     
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P+VVTYN +I G C   +++    LF +M       D  T++ LIHG+ +  + +   +
Sbjct: 846 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + ++M +  V PD    +I++D L  N
Sbjct: 906 VFNRMVDCGVSPDIVTYNILLDCLCNN 932


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 160/489 (32%), Positives = 256/489 (52%), Gaps = 14/489 (2%)

Query: 64  PPPVSSFNILLASLAKNKHYD--TRLNAT-GLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           P PV   NIL+  L          R+ AT G    + TYN ++N +C+ GR+     A  
Sbjct: 95  PLPVVPCNILIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYCRAGRIE---DARR 151

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            I    F P+  TFN LI+ L    R+ +A A+F  +   GC P+V+TY+ L++  C+  
Sbjct: 152 LISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 181 HTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
               A+ L +EM A G       C+P+ VTY+ +I+ +C EG VD+A  +   +      
Sbjct: 212 GYRQAMVLLDEMRAKG-------CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCK 264

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD VTY  ++  LC +  W E + LF EM      P  VTFN I+  LC+   +D A ++
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKV 324

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +D M + G  P+  TY++++DG C +G+++ A EL   ++S GCK D ++Y  ++ G C 
Sbjct: 325 VDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 384

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            ++ E A  L  EMV     P  VT+NT+   L +   V+ A+K+ ++M  +G   D  T
Sbjct: 385 IEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT 444

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y + IDGLC    I +A+EL   L+   C+ DI  +N L+ GLC   R + A +L  ++ 
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           H    P+  T+N +I  LC  G + +A +    M EN   P+  T+++++   ++  +  
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564

Query: 540 KVNELLHKM 548
           +  +LL  M
Sbjct: 565 EALKLLSGM 573



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 256/504 (50%), Gaps = 16/504 (3%)

Query: 62  PSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           P PP   +FN L+ +L            +D  L+  G  P++ TY+IL++  CK      
Sbjct: 157 PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLH-RGCSPSVVTYSILLDATCKASGYRQ 215

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
             +    +      P+  T+N LI  +  E  + EA  + + L + GC+P+ +TY  ++ 
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            LC +        LF EMA+        C P+ VT++TI+  LC++G VD+A  +   M 
Sbjct: 276 SLCGSERWKEVEELFAEMASNK------CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS 329

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           +    PD+VTY+S++ GLC     ++A  L   +   G +P  + +  ++  LC   + +
Sbjct: 330 EHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWE 389

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  L+  MV     P+  T+NT++   C  G ++RA ++   M   GC  D V+YN +I
Sbjct: 390 HAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSII 449

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G C  + +++A+ L   + S G KP +VT+NTL  GL  + + E A +L   M      
Sbjct: 450 DGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCP 509

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  T+ T I  LC+ G +++A+E  + +    C  +   YN ++D L K+G+ + A +L
Sbjct: 510 PDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKL 569

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              + +G   P+++TYN +I  +   G+M++A DL   M  N  +PD IT+  L +G  R
Sbjct: 570 LSGMTNGT--PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICR 627

Query: 535 INEPSKVNELLHKMKEKKVMPDAS 558
            +   +   +L ++++  + PDA+
Sbjct: 628 EDGTDRAIRMLCRLQDMGLSPDAT 651



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 254/526 (48%), Gaps = 15/526 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  +FD ML    SP  V +++ILL +  K   Y         + A G  P++ TYN+L
Sbjct: 180 DALAVFDDMLHRGCSPS-VVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C  G V         +      P+A T+  ++K L    R  E   LF ++ +  C
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ +T+NT++  LC+ G    A+ + + M+         C P+ VTYS+I+DGLC  G 
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG------CIPDIVTYSSILDGLCDVGR 352

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  L  ++K     PD + Y +++ GLC    W  A+ L  EM+     P  VTFN 
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LC+   +D A ++++ M + G  P+  TYN+++DG C    I+ A EL  +++S G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK D V++N L+ G C     E+A  L   M+     P   T+NT+   L +   +  A+
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +    M  +G   +  TY   +D L K G   EA++L   +       D+  YN +I  +
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNI 590

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+G+++ A +L   +    L P+ +TY  +  G+C +   D+A  +   +++   +PD 
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDA 650

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
             ++ ++ GF +        +    M     MPD S   I+++ L 
Sbjct: 651 TFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALA 696



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 232/471 (49%), Gaps = 12/471 (2%)

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           IA G     C        N LIK L +  R+ +A  +F  L   G    V+TYNT++NG 
Sbjct: 84  IASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGY 140

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR G    A  L           G+   P+T T++ +I  LC  G V  A A+F  M   
Sbjct: 141 CRAGRIEDARRLIS---------GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHR 191

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             +P VVTY+ L+   C A+ + +A  L  EM  +G +P +VT+NV+++ +C    +DEA
Sbjct: 192 GCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEA 251

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +L  +   G +P+A TY  ++   C   +    EELF  M S  C  D+V++N ++  
Sbjct: 252 LNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTS 311

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C+   V+ A+ +   M   G  P +VTY+++  GL ++ +V+ A++L   ++  G   D
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           T  YTT + GLC       A EL   +    C  D   +N +I  LC+ G +  A ++  
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVE 431

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +      P++VTYN +I GLCN+  +D A +L  +++     PD++TF+ L+ G   ++
Sbjct: 432 QMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVD 491

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                 +L+  M      PDA+  + V+  L +  + L+++ +  +    G
Sbjct: 492 RWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 242/481 (50%), Gaps = 20/481 (4%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGL 92
           EGD++     EA  I    L  H   P   ++  +L SL  ++ +         + +   
Sbjct: 245 EGDVD-----EALNILSD-LPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+  T+N ++   C+ G V         +      P+  T++S++ GL    R+ +A  
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L ++LK++GC+P+ I Y T++ GLC       A  L  EM   +      C P+ VT++T
Sbjct: 359 LLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD------CPPDEVTFNT 412

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I  LC++G VD+A  +  QM +   NPD+VTYNS+I GLC+    ++A  L   +   G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P +VTFN ++  LC   + ++A +L+  M+     P+A T+NT++   C  G + +A 
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E    M   GC  +  +YNI+++   K  + +EAL L   M +    P ++TYNT+   +
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNI 590

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  ++E AL L   M  +G++ DT TY +   G+C+      A+ +   L+ +    D 
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDA 650

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN ++ G C++ R   A + F  +     +P+  TY I+++ L  +  +D+A+ L ++
Sbjct: 651 TFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVN 710

Query: 513 M 513
           +
Sbjct: 711 L 711



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 14/321 (4%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   +FN ++ASL +    D       +++  G  P++ TYN +I+  C    +     
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAME 463

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +      P+  TFN+L+KGL +  R  +A  L   +    C P+  T+NT+I  LC
Sbjct: 464 LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLC 523

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G  + A+   + MA  NG     C PN  TY+ ++D L K G   +A  L   M   N
Sbjct: 524 QKGLLLQAIETLKIMAE-NG-----CIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--N 575

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD++TYN++I  +  A    EA  L   M+  G+ P  +T+  +   +C+    D A 
Sbjct: 576 GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAI 635

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           R+L  +   G+ P+A  YN ++ GFC   + + A + F  M S GC  D+ +Y IL+   
Sbjct: 636 RMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695

Query: 358 CKNKEVEEALSLYREMVSKGI 378
                ++EA  L   + S G+
Sbjct: 696 AYECLLDEAKQLLVNLCSLGV 716


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 160/453 (35%), Positives = 250/453 (55%), Gaps = 9/453 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+LR    P+   FN L+  +          +L  ++ +FG  PN+ T + LIN  C
Sbjct: 48  SFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFC 107

Query: 178 RTGHTMI--ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
                 I  AL+LF++M      IG   +P+ VTY T+I+GLCK G    A  L   M  
Sbjct: 108 HLNRGKIGEALHLFDKM------IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           +N  P+V  YN++I  LC      EA  LF EM+ +G+ P + T+N ++  LC   +   
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILI 354
            + LL+ MV   + P+  ++NT++D  C  GK+  A ++   M +  GC  + +SYN LI
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           NGYCK + +++A+ L+ EM  + + P  VTY+TL  GL  + +++ A+ LF EM      
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  TY   +D LCKN Y+ EA+ L + +     + DIQ  N  IDG+C++G L+ A +L
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F +L    L P+V TY+IMI GLC  G +D+A  LF +M+EN    +   ++ +  GF+R
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 461

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            NE S+  +LL +M  +    DAS +++ V +L
Sbjct: 462 NNETSRAIQLLQEMVARGFSADASTMTLFVKML 494



 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 174/531 (32%), Positives = 259/531 (48%), Gaps = 85/531 (16%)

Query: 27  SLLVHFRDLTT---REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
           SLL HF  L+        ++  T + A   F+ MLRM P PP    FN LL S+AK KH+
Sbjct: 19  SLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVDFNKLLTSIAKMKHH 77

Query: 84  DT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            T      ++++ G+ PN+YT +ILIN FC + R  +G                      
Sbjct: 78  STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIG---------------------- 115

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
                      EA  LF K+   G  P+V+TY TLINGLC+ G+T  A+ L   M   N 
Sbjct: 116 -----------EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN- 163

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                C+PN   Y+TIID LCK+  V +A  LF +M  + I+PD+ TYNSLIH LC+  +
Sbjct: 164 -----CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 218

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG-VRPNACTYN 316
           W     L  EM+D  + P VV+FN ++D LCK  K+ EA  ++D M+QRG   PN  +YN
Sbjct: 219 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYN 278

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           TL++G+C + +I++A  LFG M       D V+Y+ LI+G C  + +++A++L+ EMV+ 
Sbjct: 279 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 338

Query: 377 GIKPTVVTYNTLFL-----------------------------------GLFEIHQVEHA 401
              P +VTY  L                                     G+    ++E A
Sbjct: 339 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 398

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF  +   G+  D  TY+  I+GLC+ G + EA +LFR +    C L+   YN +  G
Sbjct: 399 RDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 458

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             ++     A +L   +       +  T  + ++ L +DG     + +  D
Sbjct: 459 FLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRD 509



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 184/368 (50%), Gaps = 3/368 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN--DWNEAK 262
           P+TV ++ ++  + K        +L  QM    I P++ T + LI+  CH N     EA 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF +M+ +G +P VVT+  +++ LCK      A RLL  MVQ+  +PN   YNT++D  
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   ++  A  LF  M + G   D  +YN LI+  C   E +   +L  EMV   I P V
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V++NT+   L +  +V  A  + D+M QR G   +  +Y T I+G CK   I +A+ LF 
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +   +   D   Y+ LI GLC   RL+ A  LF  +     +PN+VTY I++  LC + 
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 358

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            + +A  L   +E +   PD+   ++ I G  R  E     +L   +  K + PD    S
Sbjct: 359 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 418

Query: 562 IVVDLLVK 569
           I+++ L +
Sbjct: 419 IMINGLCR 426


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 160/486 (32%), Positives = 258/486 (53%), Gaps = 7/486 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++ A G  P + TYN L+N  CK+GR+        +I+ +  TP+  T+ SLI GL  E 
Sbjct: 11  KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 70

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R  EA  LF ++   G   + + Y  LI  L +TG    A ++++ M +        C P
Sbjct: 71  RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG------CVP 124

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VT ST+IDGL K G +  A  +F  M+   + P+ V Y++LIHGLC A   + A  + 
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 184

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M      P  +T+NV++D LCK+  ++ A    D M++ G +P+  TYN L+ GFC  
Sbjct: 185 AQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKA 244

Query: 326 GKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           G  + A        ++ GC  D  +Y  +++   KNK++EEA++L  ++ + G  PT+ T
Sbjct: 245 GNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT 304

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L  GL ++ ++E A+ L  ++  +G   D  TYT+ IDGL K     EA +LF+ + 
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +    LD   Y  LI  L ++G++  A  ++ ++     VP+VVT + MI GL   G++ 
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 424

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  +F  ME    AP+ + +  LIHG  +  +     E+L +MK+    PD    +I++
Sbjct: 425 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 484

Query: 565 DLLVKN 570
           D L K+
Sbjct: 485 DGLCKS 490



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 145/463 (31%), Positives = 232/463 (50%), Gaps = 11/463 (2%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H   P V + + ++  L+K             + A GL PN   Y+ LI+  CK  ++  
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                 ++ ++  TP+  T+N LI GL     +  A A F ++   GC+P+V TYN LI+
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G C+ G+T  A +   +    NG     C  +  TY+ I+D L K   +++A AL  ++ 
Sbjct: 240 GFCKAGNTDAASHSLAQETTING-----CTIDIHTYTAIVDWLAKNKKIEEAVALMEKIT 294

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                P + TYN+L++GLC      EA  L  +++D G  P VVT+  ++D L K ++  
Sbjct: 295 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 354

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA +L   M  RG+  +   Y  L+      GKI +A  ++ +M S GC  D V+ + +I
Sbjct: 355 EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 414

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G  K   +  A+ +++ M ++G+ P  V Y+ L  GL +  +++ AL++  +M++    
Sbjct: 415 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 474

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            DT TY   IDGLCK+G +  A   F  +    C+ D+  YN LI G CK+G    A  +
Sbjct: 475 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 534

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           F  +       NVVTY  +I GLC   Q+ KA   F  M+E  
Sbjct: 535 FDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 186/391 (47%), Gaps = 37/391 (9%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A AL  ++      P + TYN+L++GLC      EA  L  +++D G  P VVT+  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D L K ++  EA +L   M  RG+  +   Y  L+      GKI +A  ++ +M S G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  D V+ + +I+G  K   +  A+ +++ M ++G+ P  V Y+ L  GL +  +++ AL
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++  +M++     DT TY   IDGLCK+G +  A   F  +    C+ D+  YN LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 463 CKSG------------------------------------RLKFAWELFCSLPHGVLVPN 486
           CK+G                                    +++ A  L   +      P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           + TYN ++ GLC  G++++A DL   + +N   PDV+T+  LI G  +     +  +L  
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 547 KMKEKKVMPDA-SIVSIVVDLLVKNEISLKS 576
           +M  + +  D     +++ +LL   +I   S
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQAS 392



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 1/281 (0%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K++EA  L++ +   G  P   TYN L++G C MG++  A +L   +   GC  D V+Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+G  K K   EA  L++EM  +G+    V Y  L   L +  ++  A  ++  M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   D  T +T IDGL K G I  AV +F+++       +   Y+ LI GLCK+ ++  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            E+   +      P+ +TYN++I GLC  G ++ AR  F +M E    PDV T+++LI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 532 FIRI-NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           F +  N  +  + L  +        D    + +VD L KN+
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/486 (32%), Positives = 260/486 (53%), Gaps = 14/486 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +N   + P+++TYNILI+  CK  +          ++    TP+  TFNS++ GL    +
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              A +L   +    C P+  TYNTLI+GLC+  +   A  L +E  +     G V  P+
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS----GFV--PD 114

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTYS + DGLCK G +D+A  L  +M      P++VTYN+LI GLC A+   +A  L  
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            ++  G  P VVT+ +I+D LCK  ++D+A ++++ M++RG  P+  TY  LM+G C  G
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 234

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK--PTVVT 384
           +++ A  +F  M S  C  D ++Y  L+NGYCK+   +EA     + V  GI+  P +  
Sbjct: 235 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDV 289

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L  G  +  +++    +F++M   G   + +TY   +DGLCK+G + EA     ++ 
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  D+ +YN +IDGL K+ + K A ++   +    + P+ VTYN ++   C + + D
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM-KEKKVMPDASIVSIV 563
            A  +  +M +    PD +T++ LI G  + N      EL+H+M +   V+   +  + +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469

Query: 564 VDLLVK 569
           +D L K
Sbjct: 470 IDRLCK 475



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/524 (33%), Positives = 254/524 (48%), Gaps = 50/524 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN ++  L K   ++   +   +       P+  TYN LI+  CK   V      
Sbjct: 43  PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTL 102

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               + S F P+  T++ L  GL    RI EA  L  ++   GC PN++TYNTLI+GLC+
Sbjct: 103 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCK 162

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              T  A  L E + +     G V  P+ VTY+ I+DGLCKEG +DKA  +   M     
Sbjct: 163 ASKTEKAYELLETLVSS----GFV--PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 216

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ--------------------------- 271
            P V+TY +L+ GLC     +EA  +F EM+ +                           
Sbjct: 217 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 276

Query: 272 ---GVQ--PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
              G++  P +  +N +MD  CK  ++DE   + + M  RG  PN  TYN +MDG C  G
Sbjct: 277 VVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHG 336

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K++ A     SM S GC  D VSYNI+I+G  K  + +EA  +  +M+  GI P  VTYN
Sbjct: 337 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 396

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL     +  + + A+ +   M + GV  D  TY T I GL +   + +A EL   +   
Sbjct: 397 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN 456

Query: 447 KCELDI-QAYNCLIDGLCKSGRLKFAWELFCSLP-HGVLVPNVVTYNIMIQGLCNDGQMD 504
            C +     YN +ID LCK G LK A  L   +  HGV   N VTYNI I  LC +G++D
Sbjct: 457 GCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGV-EANTVTYNIFIDRLCKEGRLD 515

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +A  L  +M+      D +++  +I G  +  +  + ++L  +M
Sbjct: 516 EASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 173/580 (29%), Positives = 277/580 (47%), Gaps = 96/580 (16%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L++ L K ++ D          ++G  P++ TY+IL +  CK GR+   F  
Sbjct: 78  PSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 137

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  +  TPN  T+N+LI GL   S+  +A  L   L + G  P+V+TY  +++GLC+
Sbjct: 138 VKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCK 197

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL + E M          C P+ +TY+ +++GLC+ G VD+A  +F +M  ++ 
Sbjct: 198 EGRLDKALKMVEGMLKRG------CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ--PSVVTFNVIMDELCKNRKMDEA 296
             D + Y SL++G C ++   EA+++       G++  P +  +N +MD  CK  ++DE 
Sbjct: 252 TADALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEI 306

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             + + M  RG  PN  TYN +MDG C  GK++ A     SM S GC  D VSYNI+I+G
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 357 -----------------------------------YCKNKEVEEALSLYREMVSKGIKPT 381
                                              +CK +  ++A+ + + M+  G+ P 
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VTYNTL  GL + +++  A +L  EM R+G V +   TY T ID LCK G + +A+ L 
Sbjct: 427 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 486

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +     E +   YN  ID LCK GRL  A  L   +     + + V+Y  +I GLC  
Sbjct: 487 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKA 543

Query: 501 GQMDKAR-------------------DLFLD-----------------MEENAAAPDVIT 524
            Q+D+A                    +L +D                 M +   +P VIT
Sbjct: 544 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVIT 603

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++M+I    ++++  K  EL  +M  + ++  AS VS  V
Sbjct: 604 YNMVITCLCKLDKVDKAWELFDEMAVRGIV--ASSVSYTV 641



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/399 (33%), Positives = 203/399 (50%), Gaps = 32/399 (8%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+  TY+ +IDGLCK    DKA  +  +M D  + PD VT+NS++ GLC A  +  A  L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M ++  +PS  T+N ++  LCK + +D A  L+D  V  G  P+  TY+ L DG C 
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+I+ A EL   M   GC  + V+YN LI+G CK  + E+A  L   +VS G  P VVT
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  +  GL +  +++ ALK+ + M + G      TYT  ++GLC+ G + EA  +F+ + 
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 445 ILKCELD--------------------------------IQAYNCLIDGLCKSGRLKFAW 472
              C  D                                I  YN L+DG CK GRL    
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 307

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            +F  +     VPN+ TYNI++ GLC  G++D+A      M      PDV++++++I G 
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            + ++P +  ++L +M +  + PDA   + ++    K E
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 254/553 (45%), Gaps = 66/553 (11%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N L+  L K     K Y+    L ++G  P++ TY I+++  CK GR+      
Sbjct: 148 PNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 207

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L+   TP+  T+ +L++GL    R+ EA  +F ++ +  C  + + Y +L+NG C+
Sbjct: 208 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 267

Query: 179 TGHTMIA------------LNLFEEMANGNGEIGVV--------------CKPNTVTYST 212
           +  T  A            ++++  + +G  + G +              C PN  TY+ 
Sbjct: 268 SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 327

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++DGLCK G VD+A      M      PDVV+YN +I GL  A+   EA+++  +M+  G
Sbjct: 328 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 387

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P  VT+N +M + CK  + D+A  +L  M++ GV P+  TYNTL+ G     ++  A 
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 447

Query: 333 ELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN----- 386
           EL   M   GC      +YN +I+  CK   +++AL L   M   G++   VTYN     
Sbjct: 448 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 507

Query: 387 ---------------------------TLFLGLFEIHQVEHALKLFDEM-QRDGVAADTR 418
                                      T+ +GL +  Q++ A KL  EM    G+   + 
Sbjct: 508 LCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 567

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+   ID   K   + EA+ L   +    C   +  YN +I  LCK  ++  AWELF  +
Sbjct: 568 TFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 627

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +V + V+Y ++I GLC  G+  +A  +  +M  +    D +    L          
Sbjct: 628 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRG 687

Query: 539 SKVNELLHKMKEK 551
            +  ELL +M  K
Sbjct: 688 EEAAELLRRMTTK 700



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 193/365 (52%), Gaps = 19/365 (5%)

Query: 54  FDYMLRMHPSP--PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINC 105
           F ++  MH +   P V S+NI++  L K +K  + R     +   G+ P+  TYN L+  
Sbjct: 342 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 401

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           FCK  R          ++++   P+  T+N+LI GL   +R+ +A  L  ++   GC  +
Sbjct: 402 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS 461

Query: 166 V-ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
              TYNT+I+ LC+ G    AL L + M  G+G      + NTVTY+  ID LCKEG +D
Sbjct: 462 ACTTYNTIIDRLCKEGCLKQALLLMDHM-TGHG-----VEANTVTYNIFIDRLCKEGRLD 515

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVI 283
           +A +L  +M   +   D V+Y ++I GLC A   + A +L  EM+  +G+  +  TFN++
Sbjct: 516 EASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLL 572

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D   K +++DEA  LL+LMVQRG  P+  TYN ++   C + K+++A ELF  M   G 
Sbjct: 573 IDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGI 632

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
               VSY +LI G C     +EAL +  EM S   +   +    L+L L    + E A +
Sbjct: 633 VASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAE 692

Query: 404 LFDEM 408
           L   M
Sbjct: 693 LLRRM 697



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 47/89 (52%)

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+V TYNI+I GLC   + DKA ++  +M +    PD +TF+ ++ G  +  +  + +
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            LL  M E+   P     + ++  L K +
Sbjct: 66  SLLAVMAERNCRPSCCTYNTLISGLCKQQ 94


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 252/478 (52%), Gaps = 14/478 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           +++ YN L+  +C+ G +       G +      P+A T+  LI+ L    R+ +A +L 
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 166

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTI 213
             +   GC+PNV+TY  L+  +CR      A+ + +EM A G       C PN VTY+ I
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG-------CTPNIVTYNVI 219

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I+G+C+EG VD A+ L  ++      PD V+Y +L+ GLC +  W++ + LF EMM++  
Sbjct: 220 INGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 279

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+ VTF++++   C+   ++ A ++L+ M + G   N    N +++  C  G+++ A +
Sbjct: 280 MPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFK 339

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M S GC  D +SY  ++ G C+ +  ++A  L  EMV     P  VT+NT    L 
Sbjct: 340 LLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILC 399

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   +E A+ L ++M   G      TY   ++G C  G+I  A+ELFR++    C+ +  
Sbjct: 400 QKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTI 456

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  L+ GLC + RL  A EL   +  G   PNVVT+N+++   C  G +++A +L   M
Sbjct: 457 TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            E+   P++IT++ L+ G  +        ELLH +  K V PD    S ++ +L K +
Sbjct: 517 MEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 574



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 256/512 (50%), Gaps = 16/512 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  + D MLR     P V ++ +LL ++ +N  ++        + A G  PN+ TYN++
Sbjct: 161 DALSLLDDMLR-RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVI 219

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C+ GRV        R+    F P+  ++ +L+KGL A  R  +   LF ++    C
Sbjct: 220 INGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 279

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T++ LI   CR G    A+ + E+M          C  NT   + +I+ +CK+G 
Sbjct: 280 MPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG------CATNTTLCNIVINSICKQGR 333

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  L   M     NPD ++Y +++ GLC A  W++AK L  EM+     P+ VTFN 
Sbjct: 334 VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  LC+   +++A  L++ M + G      TYN L++GFC+ G I+ A ELF    SM 
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMP 450

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK + ++Y  L+ G C  + ++ A  L  EM+     P VVT+N L     +   +E A+
Sbjct: 451 CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAI 510

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L ++M   G   +  TY T +DG+ K+    +A+EL   L       D+  ++ +I  L
Sbjct: 511 ELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL 570

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K  R++ A +LF  +    + P  V YN ++ GLC   ++D A D F  M  N   P+ 
Sbjct: 571 SKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNE 630

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            T+ +LI G        +  +LL  +  + V+
Sbjct: 631 STYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 241/484 (49%), Gaps = 20/484 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA----TFNSLIKGLHAESR 146
           G  P++Y    LI   C+ GR S       R+LR+     +      +N+L+ G      
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDA----ARVLRAAEGSGSPVDVFAYNTLVAGYCRYGH 126

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A  L   +      P+  TY  LI  LC  G    AL+L ++M          C+PN
Sbjct: 127 LDAARRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG------CQPN 177

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ +++ +C+    ++A A+  +M+ +   P++VTYN +I+G+C     ++A+ L  
Sbjct: 178 VVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLN 237

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +   G QP  V++  ++  LC +++ D+   L   M+++   PN  T++ L+  FC  G
Sbjct: 238 RLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGG 297

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            + RA ++   M   GC  +    NI+IN  CK   V++A  L  +M S G  P  ++Y 
Sbjct: 298 MVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYT 357

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL    + + A +L +EM R+    +  T+ TFI  LC+ G I +A+ L   +   
Sbjct: 358 TVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEH 417

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C + +  YN L++G C  G +  A ELF S+P     PN +TY  ++ GLCN  ++D A
Sbjct: 418 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGA 474

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +L  +M      P+V+TF++L+  F +     +  EL+ +M E    P+    + ++D 
Sbjct: 475 AELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDG 534

Query: 567 LVKN 570
           + K+
Sbjct: 535 ITKD 538



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 254/544 (46%), Gaps = 47/544 (8%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATG---LFPNLYTYNILINCFCKIGRVSLGFIAF 119
           SP  V ++N L+A   +  H D      G   + P+ YTY  LI   C  GRV+      
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLL 166

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +LR    PN  T+  L++ +   S   +A A+  +++A GC PN++TYN +ING+CR 
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A  L   + +   +      P+TV+Y+T++ GLC     D  + LF +M ++N  
Sbjct: 227 GRVDDARELLNRLPSYGFQ------PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 280

Query: 240 PDVVTYNSLI---------------------HG--------------LCHANDWNEAKRL 264
           P+ VT++ LI                     HG              +C     ++A +L
Sbjct: 281 PNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKL 340

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M   G  P  +++  ++  LC+  + D+A  LL+ MV+    PN  T+NT +   C 
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G I +A  L   M   GC    V+YN L+NG+C    ++ AL L+R M     KP  +T
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTIT 457

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  GL    +++ A +L  EM R     +  T+   +   C+ G++ EA+EL   + 
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  YN L+DG+ K    + A EL   L    + P+V+T++ +I  L  + +++
Sbjct: 518 EHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIE 577

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  LF  +++    P  + ++ ++ G  +  E     +    M     MP+ S   I++
Sbjct: 578 EAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637

Query: 565 DLLV 568
           + L 
Sbjct: 638 EGLA 641



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 210/431 (48%), Gaps = 16/431 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+  LL  L  +K +D        +      PN  T+++LI  FC+ G V      
Sbjct: 246 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 305

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++       N    N +I  +  + R+ +A  L   + ++GC P+ I+Y T++ GLCR
Sbjct: 306 LEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCR 365

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  L  EM   N      C PN VT++T I  LC++G +++A  L  QM +   
Sbjct: 366 AERWDDAKELLNEMVRNN------CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGC 419

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              VVTYN+L++G C     + A  LF  M     +P+ +T+  ++  LC   ++D A+ 
Sbjct: 420 TVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAE 476

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+  M++    PN  T+N L+  FC  G +  A EL   M   GC  + ++YN L++G  
Sbjct: 477 LVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGIT 536

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+   E+AL L   +VSKG+ P V+T++++   L +  ++E A++LF  +Q  G+     
Sbjct: 537 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAV 596

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   + GLCK   I  A++ F  +    C  +   Y  LI+GL   G LK A +L   L
Sbjct: 597 VYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVL 656

Query: 479 -PHGVLVPNVV 488
              GVL  N+ 
Sbjct: 657 CSRGVLNKNLT 667



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 3/300 (1%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P V     ++  LC+  +  +A+R+L      G   +   YNTL+ G+C  G ++ A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L GSM       D  +Y  LI   C    V +ALSL  +M+ +G +P VVTY  L   
Sbjct: 131 RRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           +      E A+ + DEM+  G   +  TY   I+G+C+ G + +A EL   L     + D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             +Y  L+ GLC S R     ELF  +     +PN VT++++I+  C  G +++A  +  
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M E+  A +    +++I+   +        +LL+ M      PD    + V+  L + E
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 9/179 (5%)

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           DG A D    T  I  LC+ G   +A  + R        +D+ AYN L+ G C+ G L  
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  L  S+P   + P+  TY  +I+ LC+ G++  A  L  DM      P+V+T+ +L+ 
Sbjct: 130 ARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN------EISLKSLPSFLVQ 583
              R +   +   +L +M+ K   P+    +++++ + +          L  LPS+  Q
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQ 245


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 172/566 (30%), Positives = 290/566 (51%), Gaps = 50/566 (8%)

Query: 48  NEAFCIFDYMLRMHP-SPPPVSSFNILLASLAKNKHYD------TRLNATGLFP------ 94
           +E+   F + L+ +P S P  SS N L+ +L K KHYD      +++ +  +FP      
Sbjct: 39  SESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLS 98

Query: 95  -----------------------------NLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
                                        N+Y +N+L+  FC+ G        F  + R+
Sbjct: 99  ALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRN 158

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           C  P+  ++N++I GL    R++EA  LF ++K   C+PN +T++ LI+G C+ G     
Sbjct: 159 CLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEG 218

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L EEM     ++G+  + +   YS +I G C +G +++ K LF +M  +N+ P+VVTY
Sbjct: 219 FGLLEEME----KMGL--EGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTY 272

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           + L++ LC    W EA ++   M    V+P VV + V+ D L KN +  +A ++LDLMV+
Sbjct: 273 SCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVK 332

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RG  PN  TYN +++G C  G+++ A  +  +M   G K D V+Y+ L+ G C   +++E
Sbjct: 333 RGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDE 392

Query: 366 ALSLYREMVSK--GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           A+ L   ++SK   IKP V  +N +   L +  ++ HA +++  M   G  ++  TY   
Sbjct: 393 AVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNIL 452

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG    G + +A+EL++         +   Y  LI+GLCK   L  A  LF        
Sbjct: 453 IDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGT 512

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P V  YN ++  LC +  +++AR+LF +M      PDV++F+++I G ++  +     E
Sbjct: 513 RPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKE 572

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
           LL +M    ++PD    SI+++  +K
Sbjct: 573 LLLEMLNMNLVPDNITFSILINRFLK 598



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 225/450 (50%), Gaps = 16/450 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ ++ N+LI  L          ++ +K+ +    P   + + LI     T     A   
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAF-- 114

Query: 189 FEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
                   G +G++ K     N   ++ ++ G C+ G   KA  LF  MK   + PD V+
Sbjct: 115 --------GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVS 166

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN++I+GLC      EAK LF EM     +P+ VTF+ ++D  CKN  ++E   LL+ M 
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEME 226

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G+  +   Y+ L+ GFC  G I R +ELF  M       + V+Y+ L+N  CK ++ +
Sbjct: 227 KMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWK 286

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA  +   M    ++P VV Y  L  GL +  +   A+K+ D M + G   +  TY   I
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAII 346

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL--PHGV 482
           +GLCK G + +A+ +  T+     + D+  Y+ L+ GLC  G++  A +L   L      
Sbjct: 347 NGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH 406

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+V  +N++IQ LC   ++  A+ ++  M E     +++T+++LI G++   + +K  
Sbjct: 407 IKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKAL 466

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           EL     +  + P+A+  +++++ L K ++
Sbjct: 467 ELWKDAVDSGISPNAATYTVLINGLCKMQM 496



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 135/279 (48%)

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  + NTL+D        +    +   M S+       S + LI  +   ++   A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
              ++ +G    V  +N L  G  +      A+ LF  M+R+ +  D  +Y T I+GLCK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
              ++EA ELF+ ++  +C+ +   ++ LIDG CK+G ++  + L   +    L  +V  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y+ +I G C+ G +++ ++LF +M      P+V+T+  L++   +  +  +  ++L  M 
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
             KV PD    +++ D L KN  +  ++    +  ++GE
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 265/500 (53%), Gaps = 6/500 (1%)

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
           ++R+ + G+ P++ T+NILI   C+  ++    +    +     +P+  TF +L++G   
Sbjct: 199 NSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIE 258

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E  +  A  +  ++ A GC  + +T N L++G C+ G     L+  +EM+N         
Sbjct: 259 EGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG------F 312

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +P+  T++++++GLC+ G V  A  +   M  E  +PD+ TYNSLI GLC   +  EA  
Sbjct: 313 RPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVE 372

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +  +M+ +   P+ VT+N ++  LCK  +++EA+ L  ++  +G+ P+ CT+N+L+ G C
Sbjct: 373 ILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 432

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           L      A ELF  M++ GC  D+ +YN+LI+  C    +EEALSL +EM S G    VV
Sbjct: 433 LTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVV 492

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYNTL  G  +  ++E A ++FDEM+  G++ +  TY T IDGLCKN  + EA +L   +
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            +   + D   YN L+   C++G +K A ++  ++      P+ VTY  +I GL   G++
Sbjct: 553 LMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRV 612

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           + A  L   ++         T++ +I    R    S+   L  +M EK   PDA    +V
Sbjct: 613 ELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672

Query: 564 VDLLVKNEISLKSLPSFLVQ 583
              L      +     FLV+
Sbjct: 673 FRGLCSGGGPIGEAVDFLVE 692



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 259/527 (49%), Gaps = 13/527 (2%)

Query: 69  SFNILLASLAKNKHYDTRLNAT-------GLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           +F IL+ S AK + +D  +          GL  + +TYN L+N      ++ L  I   R
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++     P+  TFN LIK L    +I  A  +  ++ ++G  P+  T+ TL+ G    G+
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL + E+M      +   C  + VT + ++ G CKEG +++  +   +M +E   PD
Sbjct: 262 MNGALRIREQM------VAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPD 315

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             T+NSL++GLC       A  +   M+ +G  P + T+N ++  LCK  +++EA  +L+
Sbjct: 316 RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M+ R   PN  TYNTL+   C   ++  A EL   + S G   D  ++N LI G C   
Sbjct: 376 QMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN 435

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
               A+ L+ EM +KG  P   TYN L   L    ++E AL L  EM+  G + +  TY 
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYN 495

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T IDG CKN  I EA E+F  + +     ++  YN LIDGLCK+ R++ A +L   +   
Sbjct: 496 TLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLME 555

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            L P+  TYN ++   C  G + KA D+   M  N   PD +T+  LI G  +       
Sbjct: 556 GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELA 615

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
           + LL  ++ K ++      + V+  L + + + +++  F     +G+
Sbjct: 616 SRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 222/496 (44%), Gaps = 65/496 (13%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP---------------------- 164
           F P++  +  +++ L  +        +  ++K  GCE                       
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160

Query: 165 --------------NVITYNTLINGLCR---------TGHTMIALNLFEEMANGNGEIGV 201
                         +  TYN L+N L               M++  +  ++   N  I  
Sbjct: 161 AVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220

Query: 202 VCK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           +C+                    P+  T++T++ G  +EG ++ A  +  QM        
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VT N L+HG C      E      EM ++G +P   TFN +++ LC+   +  A  +LD
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           +M+Q G  P+  TYN+L+ G C +G++  A E+   M       + V+YN LI+  CK  
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKEN 400

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +VEEA  L R + SKGI P V T+N+L  GL   +    A++LF+EM+  G   D  TY 
Sbjct: 401 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYN 460

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             ID LC  G + EA+ L + +    C  ++  YN LIDG CK+ R++ A E+F  +   
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +  NVVTYN +I GLC + ++++A  L   M      PD  T++ L+  F R  +  K 
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKA 580

Query: 542 NELLHKMKEKKVMPDA 557
            +++  M      PD+
Sbjct: 581 ADIVQTMTSNGCEPDS 596



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 204/459 (44%), Gaps = 91/459 (19%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN L+  L +  H    L         G  P+++TYN LI   CK+G V      
Sbjct: 314 PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEI 373

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++   F+PN  T+N+LI  L  E+++ EA  L   L + G  P+V T+N+LI GLC 
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           T +  +A+ LFEEM          C P+  TY+ +ID LC  G +++A +L  +M+    
Sbjct: 434 TNNHRLAMELFEEMKTKG------CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + +VVTYN+LI G C      EA+ +F EM  QG+  +VVT+N ++D LCKNR+++EA++
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547

Query: 299 LLDLMVQRGVR-----------------------------------PNACTYNTLMDGFC 323
           L+D M+  G++                                   P++ TY TL+ G  
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG------ 377
             G++  A  L  +++  G      +YN +I    + K   EA+ L+REM+ KG      
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667

Query: 378 ------------------------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
                                           P   ++  L  GL  +   +  +KL + 
Sbjct: 668 TYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNR 727

Query: 408 MQRDGVAADTRT--------YTTFIDGLCKNGYIIEAVE 438
           + +    +D+             F D L   G I+ + E
Sbjct: 728 VMKQANFSDSEVSMIMGFLKIRKFQDALATLGRILSSRE 766



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 190/455 (41%), Gaps = 72/455 (15%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALF-LQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           P   T   + D L ++   D    L     K  N  P  V Y  ++  L     +   +R
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL--------------------- 302
           +  EM   G +    TF ++++   K    DEA  ++D+                     
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 303 ---------------MVQRGVRPNACTYN------------------------------- 316
                          MV RG++P+  T+N                               
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 317 ----TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
               TLM GF   G +N A  +   M + GC   +V+ N+L++GYCK   +EE LS   E
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M ++G +P   T+N+L  GL  I  V+HAL++ D M ++G   D  TY + I GLCK G 
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + EAVE+   + +     +   YN LI  LCK  +++ A EL   L    ++P+V T+N 
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +IQGLC       A +LF +M+     PD  T++MLI          +   LL +M+   
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              +    + ++D   KN+   ++   F   E QG
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 163/487 (33%), Positives = 257/487 (52%), Gaps = 49/487 (10%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           R G ++ I   +A  +F  M++  P  P V  F  LL ++A  + Y+T      ++   G
Sbjct: 37  RTGFLHSIRFEDALDLFLEMVQSQP-LPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +  +LY++ ILI+CFC+  R+SL     G++++                           
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMK--------------------------- 128

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                    G +P+++T+ +L++G C       A +L   M     E      PN V Y+
Sbjct: 129 --------LGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE------PNVVVYN 174

Query: 212 TIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           T+ID LCK G V+ A  L  +M K   +  D+VTYN+L+ GLC++ +W +A R+  +M  
Sbjct: 175 TLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK 234

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P V TF  ++D   K   +DEA  L   M+Q  + PN  TYN+L++G C+ G++  
Sbjct: 235 RRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYH 294

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A++ F  M S GC  + V+YN LING+CK++ VE+ + L++ M  +G+     TYNTL  
Sbjct: 295 AKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIH 354

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  ++ ++  A  +F  M   GV  D  T+   + GLC NG I  A+  F  +R  +  L
Sbjct: 355 GYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYL 414

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            I AYN +I GLCK+ +++ AWELFC LP   + P+  TY IMI GLC +G   +A +LF
Sbjct: 415 GIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELF 474

Query: 511 LDMEENA 517
             M+E+ 
Sbjct: 475 RRMKEDG 481



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 165/492 (33%), Positives = 264/492 (53%), Gaps = 48/492 (9%)

Query: 41   DINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFP 94
            +++ I  ++AF +F  ML+  P P  V  F  +L ++AK   +D       ++   G+  
Sbjct: 590  ELHCIKFDDAFGLFCEMLQSRPIPSIVD-FTRVLTAIAKMNKFDIVIYLFHKMENLGISH 648

Query: 95   NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
            +LY++ ILI+CFC+  R SL                                   A AL 
Sbjct: 649  DLYSFTILIHCFCRCSRFSL-----------------------------------ALALL 673

Query: 155  TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             K+   G +P+++T  +L+NG C+      A++L + MA    E+G+  +PN V Y+T+I
Sbjct: 674  GKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA----ELGL--EPNVVIYNTVI 727

Query: 215  DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            +GLCK   ++ A  +F  M+ + I  D VTYN+LI GLC++  W +A RL  +M+ + + 
Sbjct: 728  NGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKID 787

Query: 275  PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            P+V+ F  ++D   K   + EA  L   M++R V PN  TYN+L++GFC+ G++  A+ +
Sbjct: 788  PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHM 847

Query: 335  FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
            F  M S GC  D V+YN LI G+CK+K VE+ + L+ EM  +G+     TYNTL  G  +
Sbjct: 848  FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907

Query: 395  IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              ++  A K+F+ M   GV  D  TY   +D LC NG I +A+ +   L+  + ++DI  
Sbjct: 908  AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967

Query: 455  YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
            YN +I G+C++ ++K AW LF SL    +  + + Y  MI GLC +G   +A  L   M+
Sbjct: 968  YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027

Query: 515  ENAAAPDVITFD 526
            E+   P    +D
Sbjct: 1028 EDGFMPSERIYD 1039



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 232/447 (51%), Gaps = 10/447 (2%)

Query: 115  GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
             F  F  +L+S   P+   F  ++  +   ++      LF K++  G   ++ ++  LI+
Sbjct: 599  AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 175  GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
              CR     +AL L  +M     ++G   +P+ VT  ++++G C+     +A +L   M 
Sbjct: 659  CFCRCSRFSLALALLGKMM----KLGF--QPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712

Query: 235  DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            +  + P+VV YN++I+GLC   D N A  +F  M  +G+    VT+N ++  LC + +  
Sbjct: 713  ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772

Query: 295  EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            +A+RLL  MV+R + PN   +  L+D F   G +  A+ L+  M       + ++YN LI
Sbjct: 773  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832

Query: 355  NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            NG+C    + +A  ++  MVSKG  P VVTYNTL  G  +  +VE  +KLF EM   G+ 
Sbjct: 833  NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 415  ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAW 472
             D  TY T I G C+ G +  A ++F   R++ C +  DI  YN L+D LC +G+++ A 
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950

Query: 473  ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             +   L    +  +++TYNI+IQG+C + ++ +A  LF  +       D I +  +I G 
Sbjct: 951  VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 533  IRINEPSKVNELLHKMKEKKVMPDASI 559
             R     + ++L  +MKE   MP   I
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERI 1037



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 223/441 (50%), Gaps = 9/441 (2%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEPNVITYNTLINGLC 177
           F  +++S   P+   F  L+  + A  R  E    F++ ++ FG   ++ ++  LI+  C
Sbjct: 53  FLEMVQSQPLPSVVDFTRLLTAI-ANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFC 111

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R     +AL++  +M     ++G    P+ VT+ +++ G C    +  A +L   M    
Sbjct: 112 RCSRLSLALSILGKMM----KLGY--DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEA 296
             P+VV YN+LI  LC   D N A  L  EM  +G +   +VT+N ++  LC + +  +A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
           +R+L  M +R + P+  T+  L+D F   G ++ A+EL+  M       + V+YN LING
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C +  +  A   +  M SKG  P VVTYNTL  G  +  +VE  +KLF  M R+G+  D
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           T TY T I G C+ G +  A ++F  +       DI  +  L+ GLC +G +  A   F 
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFN 405

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +  G     +V YNIMI GLC   ++++A +LF  +      PD  T+ ++I G  +  
Sbjct: 406 DMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG 465

Query: 537 EPSKVNELLHKMKEKKVMPDA 557
              + +EL  +MKE  ++  A
Sbjct: 466 PRREADELFRRMKEDGIICQA 486



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 218/422 (51%), Gaps = 6/422 (1%)

Query: 149  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            +A  LF ++      P+++ +  ++  + +     I + LF +M N    +G+    +  
Sbjct: 598  DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMEN----LGI--SHDLY 651

Query: 209  TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            +++ +I   C+      A AL  +M      P +VT  SL++G C  N + EA  L   M
Sbjct: 652  SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711

Query: 269  MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             + G++P+VV +N +++ LCKNR ++ A  +   M ++G+  +A TYNTL+ G C  G+ 
Sbjct: 712  AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771

Query: 329  NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
              A  L   M       + + +  LI+ + K   + EA +LY+EM+ + + P ++TYN+L
Sbjct: 772  TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831

Query: 389  FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              G     ++  A  +FD M   G   D  TY T I G CK+  + + ++LF  +     
Sbjct: 832  INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 449  ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
              D   YN LI G C++G+L  A ++F  +    + P++VTYNI++  LCN+G+++KA  
Sbjct: 892  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951

Query: 509  LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
            +  D+++N    D+IT++++I G  R ++  +   L   +  K V  DA     ++  L 
Sbjct: 952  MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011

Query: 569  KN 570
            +N
Sbjct: 1012 RN 1013



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 198/383 (51%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V ++ ++  + K    D    LF +M++  I+ D+ ++  LIH  C  + ++ A  L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +MM  G QPS+VT   +++  C+  +  EA  L+D M + G+ PN   YNT+++G C 
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
              +N A E+F  ME  G   D V+YN LI+G C +    +A  L R+MV + I P V+ 
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +  L     +   +  A  L+ EM R  V  +  TY + I+G C  G + +A  +F  + 
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  D+  YN LI G CKS R++   +LFC + H  LV +  TYN +I G C  G+++
Sbjct: 853 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLN 912

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+ +F  M +    PD++T+++L+       +  K   ++  +++ ++  D    +I++
Sbjct: 913 VAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
             + +N+   ++   F    R+G
Sbjct: 973 QGMCRNDKVKEAWCLFRSLTRKG 995



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 220/428 (51%), Gaps = 11/428 (2%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLC--RTGHTMIALNLFEEMANGNGEIGVVC 203
           R  +A  LF ++      P+V+ +  L+  +   R   T+I  +   E+       G+  
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMEL------FGI-- 96

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
             +  +++ +I   C+   +  A ++  +M     +P +VT+ SL+HG C  N  ++A  
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG-VRPNACTYNTLMDGF 322
           L   M+  G +P+VV +N ++D LCKN  ++ A  LL+ M ++G +  +  TYNTL+ G 
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G+  +A  +   M       D  ++  LI+ + K   ++EA  LY++M+   I P  
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTYN+L  GL    ++ HA K FD M   G   +  TY T I+G CK+  + + ++LF+ 
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       D   YN LI G C+ G+L+ A ++F  +    + P+++T+ I++ GLC +G+
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE 396

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +  A   F DM        ++ ++++IHG  + ++  +  EL  ++  + V PDA   +I
Sbjct: 397 IGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTI 456

Query: 563 VVDLLVKN 570
           ++  L KN
Sbjct: 457 MILGLCKN 464



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/591 (25%), Positives = 248/591 (41%), Gaps = 102/591 (17%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+    K++  +       R+   GL  + +TYN LI+ +C++G++ +    
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368

Query: 119 FGRILRSCFTPNAAT-----------------------------------FNSLIKGLHA 143
           F  ++    TP+  T                                   +N +I GL  
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
             ++ EA  LF +L   G +P+  TY  +I GLC+ G    A  LF  M     E G++C
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK----EDGIIC 484

Query: 204 KP-----------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI-------------- 238
           +            N V+  TII    +   + ++  L+    D  +              
Sbjct: 485 QAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSS 544

Query: 239 -----------------NPD---------------VVTYNSLIHGLCHANDWNEAKRLFI 266
                            NP+                  Y   +    H   +++A  LF 
Sbjct: 545 SVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFC 604

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+     PS+V F  ++  + K  K D    L   M   G+  +  ++  L+  FC   
Sbjct: 605 EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCS 664

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + + A  L G M  +G +   V+   L+NG+C+    +EA+SL   M   G++P VV YN
Sbjct: 665 RFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYN 724

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL +   + +AL++F  M++ G+ AD  TY T I GLC +G   +A  L R +   
Sbjct: 725 TVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR 784

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           K + ++  +  LID   K G L  A  L+  +    + PN++TYN +I G C  G++  A
Sbjct: 785 KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           + +F  M      PDV+T++ LI GF +        +L  +M  + ++ DA
Sbjct: 845 KHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 173/347 (49%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A  LF +M      P +V +  ++  +   N ++    LF +M + G+   + +F ++
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C+  +   A  LL  M++ G +P+  T  +L++GFC   +   A  L  SM  +G 
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + + V YN +ING CKN+++  AL ++  M  KGI    VTYNTL  GL    +   A +
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  +M +  +  +   +T  ID   K G ++EA  L++ +       +I  YN LI+G C
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             GRL  A  +F  +      P+VVTYN +I G C   +++    LF +M       D  
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           T++ LIHG+ +  + +   ++ ++M +  V PD    +I++D L  N
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNN 943



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 36/343 (10%)

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G  H+  + +A  LF+EM+     PSVV F  ++  +   R+                  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRR------------------ 80

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               Y T++                  ME  G  HD  S+ ILI+ +C+   +  ALS+ 
Sbjct: 81  ----YETVI-------------YFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSIL 123

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            +M+  G  P++VT+ +L  G    +++  A  L   M + G   +   Y T ID LCKN
Sbjct: 124 GKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKN 183

Query: 431 GYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           G +  A+EL   + +  +   D+  YN L+ GLC SG  + A  +   +    + P+V T
Sbjct: 184 GDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFT 243

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           +  +I      G +D+A++L+  M +++  P+ +T++ LI+G           +    M 
Sbjct: 244 FTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMA 303

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            K   P+    + +++   K+      +  F    R+G VG++
Sbjct: 304 SKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 2/243 (0%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L  G+  +   E+AL L+ EMV     P+VV +  L   +  + + E  +    +M+  G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           ++ D  ++T  I   C+   +  A+ +   +  L  +  I  +  L+ G C   R+  A+
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA-APDVITFDMLIHG 531
            L  S+      PNVV YN +I  LC +G ++ A +L  +ME+    A D++T++ L+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
                E  +   +L  M ++++ PD    + ++D  VK + +L        Q  Q  +G 
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVK-QGNLDEAQELYKQMLQSSIGP 274

Query: 592 SNV 594
           + V
Sbjct: 275 NTV 277



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 26/234 (11%)

Query: 32   FRDLTTREGDINVITPNE---AFCI----------FDYMLRMHPSPPPVSSFNILLASLA 78
            ++++  R    N++T N     FCI          FD M+      P V ++N L+    
Sbjct: 813  YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS-KGCFPDVVTYNTLITGFC 871

Query: 79   KNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
            K+K  +        +   GL  + +TYN LI+ +C+ G++++    F R++     P+  
Sbjct: 872  KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931

Query: 133  TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            T+N L+  L    +I +A  +   L+    + ++ITYN +I G+CR      A  LF  +
Sbjct: 932  TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991

Query: 193  ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
                   GV  K + + Y T+I GLC+ G   +A  L  +MK++   P    Y+
Sbjct: 992  TRK----GV--KLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 172/517 (33%), Positives = 275/517 (53%), Gaps = 55/517 (10%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           NEA  +F +M+   P P  +  F  LL  +AK K +D  +N        G+  +LYT N+
Sbjct: 54  NEALDLFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+NCFC+  +  L                                   A++   K+   G
Sbjct: 113 LMNCFCQSSQPYL-----------------------------------ASSFLGKMMKLG 137

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+++T+ +LING C       A+++  +M     E+G+  KP+ V Y+TIID LCK G
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV----EMGI--KPDVVMYTTIIDSLCKNG 191

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V+ A +LF QM++  I PDVV Y SL++GLC++  W +A  L   M  + ++P V+TFN
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K  K  +A  L + M++  + PN  TY +L++GFC+ G ++ A ++F  ME+ 
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D V+Y  LING+CK K+V++A+ ++ EM  KG+    +TY TL  G  ++ +   A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD-----IQAYN 456
            ++F  M   GV  + RTY   +  LC NG + +A+ +F  ++  K E+D     I  YN
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ--KREMDGVAPNIWTYN 429

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+ GLC +G+L+ A  +F  +    +   ++TY I+IQG+C  G++  A +LF  +   
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
              P+V+T+  +I G  R     + + L  KMKE  V
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 163/307 (53%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y  ++    H+  +NEA  LF  M++    PS++ F  +++ + K +K D    L D + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             GV  +  T N LM+ FC   +   A    G M  +G + D V++  LING+C    +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+S+  +MV  GIKP VV Y T+   L +   V +AL LFD+M+  G+  D   YT+ +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLC +G   +A  L R +   K + D+  +N LID   K G+   A EL+  +    + 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PN+ TY  +I G C +G +D+AR +F  ME     PDV+ +  LI+GF +  +     ++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 545 LHKMKEK 551
            ++M +K
Sbjct: 340 FYEMSQK 346



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 1/364 (0%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           ++A  LF  M +    P ++ +  L++ +     ++    L   +   GV   + T N++
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           M+  C++ +   AS  L  M++ G  P+  T+ +L++GFCL  ++  A  +   M  MG 
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K D V Y  +I+  CKN  V  ALSL+ +M + GI+P VV Y +L  GL    +   A  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L   M +  +  D  T+   ID   K G  ++A EL+  +  +    +I  Y  LI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G +  A ++F  +      P+VV Y  +I G C   ++D A  +F +M +     + I
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL-V 582
           T+  LI GF ++ +P+   E+   M  + V P+    ++++  L  N    K+L  F  +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413

Query: 583 QERQ 586
           Q+R+
Sbjct: 414 QKRE 417



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 1/218 (0%)

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL NG   + +  EAL L+  MV     P+++ +  L   + ++ + +  + L D +Q  
Sbjct: 43  ILRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV+ D  T    ++  C++     A      +  L  E DI  +  LI+G C   R++ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +   +    + P+VV Y  +I  LC +G ++ A  LF  ME     PDV+ +  L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                     + LL  M ++K+ PD    + ++D  VK
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 169/495 (34%), Positives = 261/495 (52%), Gaps = 55/495 (11%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVS 113
           M+   P +  F  + ASL K  H+ T      ++   G+  +L   NIL+NCFC +G+V 
Sbjct: 1   MNNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVC 60

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
           L                               ++ E       + A G + N ++Y TLI
Sbjct: 61  LN-----------------------------DKVKETLHFHDDVIAKGFQLNQVSYGTLI 91

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +GLC+ G T  A+ +   +       G++ +PN V YSTII  LCK+  V  A  L+ QM
Sbjct: 92  DGLCKAGETRAAMQVLRNID------GLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQM 145

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             + I+PDV+TYN+L++G        EA  LF +M+ + ++P + TFN+++D LCK  +M
Sbjct: 146 LLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEM 205

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A  +L +M+++ V P+  TYN+LMDG+ L+ + N+A  +F +M   G   D  SY+++
Sbjct: 206 KKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVM 265

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING CK K V+EA++L +EM SK + P  VTY++L  GL +  ++  A  L +EM   G 
Sbjct: 266 INGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQ 325

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
            AD  TY + +D LCKN  + +A+ L   ++    + DI  Y  L+DGLCK+GRLK A E
Sbjct: 326 PADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQE 385

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           ++  L              +I+G   D   DKA  L   ME+N   P+ +TF++LI    
Sbjct: 386 VYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALF 431

Query: 534 RINEPSKVNELLHKM 548
             +   K  ELL +M
Sbjct: 432 ENDMNDKAVELLREM 446



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 198/414 (47%), Gaps = 49/414 (11%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P +  +  +   L +  H    ++L  +M     E+  + + + V  + +++  C  G V
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQM-----ELRGI-QTDLVNLNILVNCFCHLGQV 59

Query: 224 ---DKAKALFLQMKDENINP----DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
              DK K   L   D+ I      + V+Y +LI GLC A +   A ++   +    VQP+
Sbjct: 60  CLNDKVKET-LHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPN 118

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VV ++ I+  LCK++ + +A  L   M+ + + P+  TYNTLM G  ++G++  A  LF 
Sbjct: 119 VVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFN 178

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M     K D  ++NIL++G CK  E+++A ++   M+ + + P V+TYN+L  G F + 
Sbjct: 179 QMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVK 238

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           Q   A  +F+ M R GV  D                                   + +Y+
Sbjct: 239 QENKATFVFNTMARRGVTPD-----------------------------------VHSYS 263

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +I+GLCK+  +  A  L   +    + PN VTY+ +I GL   G++  A DL  +M   
Sbjct: 264 VMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNR 323

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               DVIT++ L+    + ++  K   LL K+K++ + PD    +I+VD L KN
Sbjct: 324 GQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKN 377



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 139/260 (53%), Gaps = 9/260 (3%)

Query: 322 FCLMGKINRAEELFG---SMESMGCKHDDVSYNILINGYCK------NKEVEEALSLYRE 372
           F  + KIN    +      ME  G + D V+ NIL+N +C       N +V+E L  + +
Sbjct: 15  FASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDD 74

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           +++KG +   V+Y TL  GL +  +   A+++   +    V  +   Y+T I  LCK+  
Sbjct: 75  VIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKL 134

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +I+A +L+  + + +   D+  YN L+ G    GRLK A  LF  +    + P++ T+NI
Sbjct: 135 VIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNI 194

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           ++ GLC +G+M KAR++   M + +  PDVIT++ L+ G+  + + +K   + + M  + 
Sbjct: 195 LVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRG 254

Query: 553 VMPDASIVSIVVDLLVKNEI 572
           V PD    S++++ L K ++
Sbjct: 255 VTPDVHSYSVMINGLCKTKM 274


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 159/485 (32%), Positives = 256/485 (52%), Gaps = 16/485 (3%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRI 147
           A+G   +++ YN L+  +C+ GR+     A  R++ S    P+A T+  +I+GL    R+
Sbjct: 102 ASGAPVDVFAYNTLVAGYCRYGRLD----AARRLIASMPVPPDAYTYTPIIRGLCDRGRV 157

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPN 206
            +A AL   +   GC+P+V+TY  L+  +C++     A+N+ +EM A G       C PN
Sbjct: 158 GDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-------CTPN 210

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ II+G+C+EG VD AK +  ++      PD+V+Y +++ GLC A  W++ K LF 
Sbjct: 211 IVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFA 270

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+D+   P+ VTF++++   C+   ++ A ++L  M Q G  PN    N +++  C  G
Sbjct: 271 EMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQG 330

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A +   +M   GC  D +SY  ++ G C+    E A  L  EMV K   P  VT+N
Sbjct: 331 RVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T    L +   +E A+KL + M   G +    TY   + G C  G +  A+ELF  L   
Sbjct: 391 TFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL--- 447

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            CE +   Y  L+ GLC + RL  A EL   +       N VT+N+++   C  G +++A
Sbjct: 448 PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEA 507

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +L   M E+   P++ITF+ L+ G  +     +  ELLH +  K V  D    S VVD+
Sbjct: 508 MELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDV 567

Query: 567 LVKNE 571
           L + +
Sbjct: 568 LSRED 572



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 255/512 (49%), Gaps = 16/512 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           +A  + D ML+     P V ++ +LL ++ K+  +   +N      A G  PN+ TYN++
Sbjct: 159 DALALLDDMLQ-RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVI 217

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C+ GRV        R+    F P+  ++ +++KGL A  R  +   LF ++    C
Sbjct: 218 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 277

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T++ L+   CR G    A+ + ++M+         C PNT   + +I+ +CK+G 
Sbjct: 278 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG------CTPNTTLCNIVINAICKQGR 331

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A      M     NPD ++Y +++ GLC A  W  AK L  EM+ +   P+ VTFN 
Sbjct: 332 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNT 391

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  LC+   +++A +L++LM + G      TYN L+ GFC+ G+++ A ELF ++    
Sbjct: 392 FICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP--- 448

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C+ + ++Y  L+ G C  + ++ A  L   M+ K      VT+N L     +   VE A+
Sbjct: 449 CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAM 508

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L ++M   G   +  T+ T +DG+ K+    EA+EL   L      LD   Y+ ++D L
Sbjct: 509 ELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 568

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            +  R + A ++  ++    + P V  YN ++  LC   + D+A D F  M  N   P+ 
Sbjct: 569 SREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNE 628

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            T+ +LI G        +   +L ++  K V+
Sbjct: 629 STYIILIEGLAHEGLLKEARYVLSELYAKGVL 660



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 237/487 (48%), Gaps = 20/487 (4%)

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA----TFNSLIKGLHA 143
           ++ G  P++Y    LI   C+ GR S       R+LR+     A      +N+L+ G   
Sbjct: 66  SSRGEAPDVYLCTKLIRNLCRRGRTSDA----ARVLRTAEASGAPVDVFAYNTLVAGYCR 121

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
             R+  A  L   +      P+  TY  +I GLC  G    AL L ++M          C
Sbjct: 122 YGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG------C 172

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +P+ VTY+ +++ +CK     +A  +  +M+ +   P++VTYN +I+G+C     ++AK 
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 232

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +   +   G QP +V++  ++  LC  R+ D+   L   MV +   PN  T++ L+  FC
Sbjct: 233 ILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 292

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G + RA ++   M   GC  +    NI+IN  CK   V++A      M   G  P  +
Sbjct: 293 RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTI 352

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +Y T+  GL    + EHA +L  EM R     +  T+ TFI  LC+ G I +A++L   +
Sbjct: 353 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C + I  YN L+ G C  GR+  A ELF +LP     PN +TY  ++ GLC+  ++
Sbjct: 413 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERL 469

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A +L   M +     + +TF++L+  F +     +  EL+++M E    P+    + +
Sbjct: 470 DAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 529

Query: 564 VDLLVKN 570
           +D + K+
Sbjct: 530 LDGITKD 536



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 196/395 (49%), Gaps = 9/395 (2%)

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           ++ L A   + EAA L     + G  P+V     LI  LCR G T  A  +         
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
            + V        Y+T++ G C+ G +D A+ L   M    + PD  TY  +I GLC    
Sbjct: 106 PVDVF------AYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGR 156

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             +A  L  +M+ +G QPSVVT+ V+++ +CK+    EA  +LD M  +G  PN  TYN 
Sbjct: 157 VGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNV 216

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           +++G C  G+++ A+E+   + S G + D VSY  ++ G C  +  ++   L+ EMV K 
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P  VT++ L         VE A+++  +M + G   +T      I+ +CK G + +A 
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           +    + +  C  D  +Y  ++ GLC++GR + A EL   +      PN VT+N  I  L
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 396

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           C  G +++A  L   M E   +  ++T++ L+HGF
Sbjct: 397 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGF 431


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/518 (31%), Positives = 266/518 (51%), Gaps = 44/518 (8%)

Query: 86  RLNATGLF---PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           ++NA G F   P L  YN ++    K   +      +  +L +  +PN  TFN+++ G  
Sbjct: 146 KMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYC 205

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               ++EA    +K+   G  P+  TY +LI G CR      A  +F  M          
Sbjct: 206 KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG------ 259

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C+ N V+Y+ +I GLC+ G +++A  LF  M ++N  P V TY  LI+ L  +    EA 
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF EM ++G +P+V T+ V++D LCK  KMDEA ++L  M ++G+ P+  TYN L+DG+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G I+ A E+   MES  C  +  +YN LI G CK ++V +A++L  +M+ + + P++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TYN+L  G  +++ +E A +L   M  +G+  D  TY+ FID LCK G + EA  LF +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC---- 498
           ++    + +   Y  LIDG CK G++  A+ L   + +   +PN  TYN++I+GLC    
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 499 -------------------------------NDGQMDKARDLFLDMEENAAAPDVITFDM 527
                                           DG  D A  +F  M      PDV T+  
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +H +       +V++++ KM E+ ++PD    ++++D
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 171/560 (30%), Positives = 262/560 (46%), Gaps = 65/560 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFP------NLYTYNILINCFCKIGRVSLGFIA 118
           P   ++  L+    +NK  D       + P      N  +Y  LI+  C+ GR++     
Sbjct: 227 PDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL 286

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P   T+  LI  L    R +EA  LF ++K  GCEPNV TY  LI+GLC+
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD-------------- 224
                 A  +  EM+    E G++  P+ VTY+ +IDG CKEG +D              
Sbjct: 347 ENKMDEARKMLSEMS----EKGLI--PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400

Query: 225 ---------------------KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
                                KA AL  +M +  ++P ++TYNSLIHG C  ND   A R
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L   M + G+ P   T++V +D LCK  +++EA  L D +  +GV+ N   Y  L+DG+C
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +GKI+ A  L   M +  C  +  +YN+LI G CK K+++EA SL  +M++ G+KPTVV
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY  L   + +    +HALK+F+ M   G   D  TYT F+      G + E  ++   +
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+  Y  LIDG  + G    A++    +      P++   +I+I+ L ++ +M
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700

Query: 504 DKARD------------------LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            + R                   LF  M E+    DV  +  LI GF +     +   L+
Sbjct: 701 KETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLV 760

Query: 546 HKMKEKKVMPDASIVSIVVD 565
           H MKE+ + P   I + ++D
Sbjct: 761 HHMKERGMSPSEDIYNSLLD 780



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 263/571 (46%), Gaps = 56/571 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EA  +F+ M +     P V ++ +L+  L K    D      + ++  GL P++ TYN L
Sbjct: 317 EALNLFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ +CK G +   F     +  +   PN  T+N LI GL  + ++ +A AL  K+     
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG----------------------EIG 200
            P++ITYN+LI+G C+      A  L   M N NG                      E G
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLM-NENGLVPDQWTYSVFIDTLCKEGRVEEAG 494

Query: 201 VV--------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
            +         K N V Y+ +IDG CK G +D A +L  +M ++   P+  TYN LI GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  L  +M+  GV+P+VVT+ +++ E+ K+   D A ++ + MV  G +P+ 
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
           CTY   +  +   G +   +++   M   G   D V+Y +LI+GY +      A    + 
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674

Query: 373 MVSKGIKPTVVTYNTLF---------------LGLFEIH---QVEHALKLFDEMQRDGVA 414
           MV  G KP++   + L                +G+  +    + E ALKLF++M   G  
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCT 734

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D   Y   I G C+   + EA  L   ++          YN L+D  CK G    A  L
Sbjct: 735 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 794

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
             ++    L+P + +Y +++ GL  +G  +KA+ +F  +       D + + +LI G ++
Sbjct: 795 VDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 854

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   + +EL+  M+EK   P+    S++++
Sbjct: 855 RDLVDECSELIDIMEEKGCQPNPLTYSLLIE 885



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 219/448 (48%), Gaps = 39/448 (8%)

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           ++I   C     +  L +F +M N +GE     KP    Y+TI+  L K   +D+ K ++
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKM-NADGEFKF--KPTLRCYNTILMSLSKFLLIDEMKTVY 182

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           L++ +  I+P++ T+N++++G C   +  EA+    +++  G+ P   T+  ++   C+N
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG-------------- 336
           + +D A  +  +M Q+G + N  +Y  L+ G C  G+IN A +LF               
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302

Query: 337 ---------------------SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
                                 M+  GC+ +  +Y +LI+G CK  +++EA  +  EM  
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KG+ P+VVTYN L  G  +   ++ A ++ D M+ +    +TRTY   I GLCK   + +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+ L   +   K    +  YN LI G CK   L+ A+ L   +    LVP+  TY++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            LC +G++++A  LF  ++      + + +  LI G+ ++ +      LL +M     +P
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           ++   +++++ L K E  +K   S + +
Sbjct: 543 NSYTYNVLIEGLCK-EKKMKEASSLVAK 569



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 221/509 (43%), Gaps = 66/509 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++AF I D M   +   P   ++N L+  L K +          ++    L P+L TYN 
Sbjct: 386 DDAFEILDLM-ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  CK+  +   +     +  +   P+  T++  I  L  E R+ EA  LF  +KA G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            + N + Y  LI+G C+ G   +A +L E M N        C PN+ TY+ +I+GLCKE 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLND------ACLPNSYTYNVLIEGLCKEK 558

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A +L  +M    + P VVTY  LI  +     ++ A ++F  M+  G QP V T+ 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             +        ++E   ++  M + G+ P+  TY  L+DG+  +G  +RA +    M   
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 342 GCK--------------HD--------------------------------------DVS 349
           GCK              H+                                      DVS
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVS 738

Query: 350 -YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
            Y  LI G+C+ + +EEA  L   M  +G+ P+   YN+L     ++     A++L D M
Sbjct: 739 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 798

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
             +G+     +Y   + GL   G   +A  +F  L       D  A+  LIDGL K   +
Sbjct: 799 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 858

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
               EL   +      PN +TY+++I+GL
Sbjct: 859 DECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P L +Y +L+      G        F  +L   +  +   +  LI GL     + E 
Sbjct: 802 GLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDEC 861

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRT 179
           + L   ++  GC+PN +TY+ LI GL RT
Sbjct: 862 SELIDIMEEKGCQPNPLTYSLLIEGLERT 890


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/518 (31%), Positives = 266/518 (51%), Gaps = 44/518 (8%)

Query: 86  RLNATGLF---PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           ++NA G F   P L  YN ++    K   +      +  +L +  +PN  TFN+++ G  
Sbjct: 146 KMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYC 205

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               ++EA    +K+   G  P+  TY +LI G CR      A  +F  M          
Sbjct: 206 KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG------ 259

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C+ N V+Y+ +I GLC+ G +++A  LF  M ++N  P V TY  LI+ L  +    EA 
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF EM ++G +P+V T+ V++D LCK  KMDEA ++L  M ++G+ P+  TYN L+DG+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G I+ A E+   MES  C  +  +YN LI G CK ++V +A++L  +M+ + + P++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TYN+L  G  +++ +E A +L   M  +G+  D  TY+ FID LCK G + EA  LF +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC---- 498
           ++    + +   Y  LIDG CK G++  A+ L   + +   +PN  TYN++I+GLC    
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 499 -------------------------------NDGQMDKARDLFLDMEENAAAPDVITFDM 527
                                           DG  D A  +F  M      PDV T+  
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +H +       +V++++ KM E+ ++PD    ++++D
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 262/571 (45%), Gaps = 76/571 (13%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFP------NLYTYNILINCFCKIGRVSLGFIA 118
           P   ++  L+    +NK  D       + P      N  +Y  LI+  C+ GR++     
Sbjct: 227 PDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKL 286

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P   T+  LI  L    R +EA  LF ++K  GCEPNV TY  LI+GLC+
Sbjct: 287 FADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCK 346

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD-------------- 224
                 A  +  EM+    E G++  P+ VTY+ +IDG CKEG +D              
Sbjct: 347 ENKMDEARKMLSEMS----EKGLI--PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400

Query: 225 ---------------------KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
                                KA AL  +M +  ++P ++TYNSLIHG C  ND   A R
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L   M + G+ P   T++V +D LCK  +++EA  L D +  +GV+ N   Y  L+DG+C
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +GKI+ A  L   M +  C  +  +YN+LI G CK K+++EA SL  +M++ G+KPTVV
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY  L   + +    +HALK+F+ M   G   D  TYT F+      G + E  ++   +
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+  Y  LIDG  + G    A++    +      P++   +I+I+ L ++ +M
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700

Query: 504 DKARD-----------------------------LFLDMEENAAAPDVITFDMLIHGFIR 534
            + R                              LF  M E+    DV  +  LI GF +
Sbjct: 701 KETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 760

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                +   L+H MKE+ + P   I + ++D
Sbjct: 761 QERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 257/576 (44%), Gaps = 67/576 (11%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EA  +F+ M +     P V ++ +L+  L K    D      + ++  GL P++ TYN L
Sbjct: 317 EALNLFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ +CK G +   F     +  +   PN  T+N LI GL  + ++ +A AL  K+     
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG----------------------EIG 200
            P++ITYN+LI+G C+      A  L   M N NG                      E G
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLM-NENGLVPDQWTYSVFIDTLCKEGRVEEAG 494

Query: 201 VV--------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
            +         K N V Y+ +IDG CK G +D A +L  +M ++   P+  TYN LI GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  L  +M+  GV+P+VVT+ +++ E+ K+   D A ++ + MV  G +P+ 
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
           CTY   +  +   G +   +++   M   G   D V+Y +LI+GY +      A    + 
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674

Query: 373 MVSKGIKPTVVTYNTLFLGL-----------------------------FEIHQVEHALK 403
           MV  G KP++   + L   L                             ++  + E ALK
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALK 734

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           LF++M   G   D   Y   I G C+   + EA  L   ++          YN L+D  C
Sbjct: 735 LFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCC 794

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K G    A  L  ++    L+P + +Y +++ GL  +G  +KA+ +F  +       D +
Sbjct: 795 KLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEV 854

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            + +LI G ++ +   + +EL+  M+EK     A I
Sbjct: 855 AWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADI 890



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 219/448 (48%), Gaps = 39/448 (8%)

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           ++I   C     +  L +F +M N +GE     KP    Y+TI+  L K   +D+ K ++
Sbjct: 126 SMIKSCCSIEDVLFVLEVFRKM-NADGEFKF--KPTLRCYNTILMSLSKFLLIDEMKTVY 182

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           L++ +  I+P++ T+N++++G C   +  EA+    +++  G+ P   T+  ++   C+N
Sbjct: 183 LELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRN 242

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG-------------- 336
           + +D A  +  +M Q+G + N  +Y  L+ G C  G+IN A +LF               
Sbjct: 243 KGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTY 302

Query: 337 ---------------------SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
                                 M+  GC+ +  +Y +LI+G CK  +++EA  +  EM  
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KG+ P+VVTYN L  G  +   ++ A ++ D M+ +    +TRTY   I GLCK   + +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+ L   +   K    +  YN LI G CK   L+ A+ L   +    LVP+  TY++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            LC +G++++A  LF  ++      + + +  LI G+ ++ +      LL +M     +P
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           ++   +++++ L K E  +K   S + +
Sbjct: 543 NSYTYNVLIEGLCK-EKKMKEASSLVAK 569


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/440 (33%), Positives = 245/440 (55%), Gaps = 17/440 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
            N  TF +L+ GL  E R+++A AL  ++   G +P+ +TY T++NG+C+ G T+ ALN+
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M           K N V YS I+D LCK+G   KA+ +F +M ++ I P+V+TYN +
Sbjct: 68  LRKMDESQ------IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCM 121

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I G C    W++A++L  +M+++ + P VVTF+ +++   K  K+  A  L   M++R +
Sbjct: 122 IDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE------ 362
            P   TY++++DGFC   ++  A+ +F  M S GC  D ++ N LI+G C+ K       
Sbjct: 182 FPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGF 241

Query: 363 -----VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
                V  A  L++EM+S G+ P +VT NTL  GL E  ++E AL++F   Q+  +  DT
Sbjct: 242 CQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDT 301

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T    I+G+CK   + EA +LF +L +   E D+  YN LI    K G    A +++  
Sbjct: 302 ATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLE 361

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    ++P+ VTYN M+ G C   ++++AR +   M     +PDV+TF  LI G+ +   
Sbjct: 362 MLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGR 421

Query: 538 PSKVNELLHKMKEKKVMPDA 557
                EL  +M ++ ++ D 
Sbjct: 422 VDDGLELFSEMCQRGLVADT 441



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 261/496 (52%), Gaps = 18/496 (3%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           TG   N+ T+  L+N  C+ GRV        R++     P+A T+ +++ G+      + 
Sbjct: 4   TGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVS 63

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +  K+     + NV+ Y+ +++ LC+ G+ + A N+F EM     E G+   PN +T
Sbjct: 64  ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMH----EKGIF--PNVLT 117

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +IDG C  G    A+ L   M + NI+PDVVT+++LI+        + A+ L+ EM+
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD--------- 320
            + + P+ +T++ ++D  CK+ ++++A  + DLMV +G  P+  T NTL+D         
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237

Query: 321 --GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
             GFC +G +N A++LF  M S G   D V+ N L+ G C+N ++E+AL +++      +
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
                T N +  G+ + ++V+ A  LF+ +  +GV  D  TY   I    K G  + A +
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           ++  +           YN ++DG CK  RL+ A ++  S+      P+VVT++ +I+G C
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYC 417

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA- 557
             G++D   +LF +M +     D IT++ LIHGF ++ + +   ++  +M    V PD  
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTI 477

Query: 558 SIVSIVVDLLVKNEIS 573
           +  S++  L  K E+ 
Sbjct: 478 TFRSMLAGLCTKAELQ 493



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 240/499 (48%), Gaps = 46/499 (9%)

Query: 64  PPPVSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  V +F  L+  L +            R+   G  P+  TY  ++N  CK+G       
Sbjct: 7   PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              ++  S    N   +++++  L  +   ++A  +FT++   G  PNV+TYN +I+G C
Sbjct: 67  MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCK-----------------------------PNTV 208
             G    A  L  +M   N +  VV                               P T+
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI-----------HGLCHAND 257
           TYS++IDG CK   ++ AK +F  M  +  +PD++T N+LI           HG C   +
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
            N A+ LF EM+  GV P +VT N ++  LC+N K+++A  +  +  +  +  +  T N 
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           +++G C   K++ A +LF S+   G + D V+YNILI  + K      A  +Y EM+ KG
Sbjct: 307 IINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKG 366

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           I P+ VTYN++  G  + +++E A ++ D M  +G + D  T++T I G CK G + + +
Sbjct: 367 IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL 426

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           ELF  +       D   YN LI G CK G L  A ++F  +    + P+ +T+  M+ GL
Sbjct: 427 ELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486

Query: 498 CNDGQMDKARDLFLDMEEN 516
           C   ++ K   +  D++++
Sbjct: 487 CTKAELQKGLTMLEDLQKS 505



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 201/379 (53%), Gaps = 24/379 (6%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C  N VT++T+++GLC+EG V +A AL  +M +E   PD VTY ++++G+C   D   A 
Sbjct: 6   CPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSAL 65

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            +  +M +  ++ +VV ++ I+D LCK+    +A  +   M ++G+ PN  TYN ++DG+
Sbjct: 66  NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGY 125

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  GK + AE+L   M       D V+++ LIN + K  +V  A  LYREM+ + I PT 
Sbjct: 126 CSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTT 185

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TY+++  G  +  ++E A  +FD M   G + D  T  T IDG C+             
Sbjct: 186 ITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCR------------- 232

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
                      A   LI G C+ G +  A +LF  +    + P++VT N ++ GLC +G+
Sbjct: 233 -----------AKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGK 281

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           ++KA ++F   +++    D  T +++I+G  + N+  +  +L + +    V  D    +I
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNI 341

Query: 563 VVDLLVKNEISLKSLPSFL 581
           ++ + VK    L++   +L
Sbjct: 342 LIGVFVKEGNFLRAEDIYL 360



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 158/313 (50%), Gaps = 11/313 (3%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++ G   +VVTF  +M+ LC+  ++ +A  L+D MV+ G +P+A TY T+++G C +G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A  +   M+    K + V Y+ +++  CK+    +A +++ EM  KGI P V+TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G     +   A +L  +M    +  D  T++  I+   K G +  A EL+R +    
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI-----------MIQG 496
                  Y+ +IDG CK  RL+ A  +F  +      P+++T N            +I G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C  G ++ A+DLF +M  N  +PD++T + L+ G     +  K  E+    ++ K+  D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 557 ASIVSIVVDLLVK 569
            +  +I+++ + K
Sbjct: 301 TATCNIIINGMCK 313



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 11/294 (3%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV+ G   N  T+ TLM+G C  G++ +A  L   M   G + D V+Y  ++NG CK  +
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
              AL++ R+M    IK  VV Y+ +   L +      A  +F EM   G+  +  TY  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG C  G   +A +L R +     + D+  ++ LI+   K G++  A EL+  +    
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI-----------HG 531
           + P  +TY+ MI G C   +++ A+ +F  M     +PD+IT + LI           HG
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           F ++   +   +L  +M    V PD    + ++  L +N    K+L  F V ++
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%)

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            NVVT+  ++ GLC +G++ +A  L   M E    PD +T+  +++G  ++ +      +
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           L KM E ++  +  I S +VD L K+   +K+   F     +G
Sbjct: 68  LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKG 110


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 176/522 (33%), Positives = 264/522 (50%), Gaps = 17/522 (3%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYN-----------ILINCFCKIGR 111
           S   ++ FN  L  L K   + T   A  LF N   YN           I+I CF  +G 
Sbjct: 32  SHSSLAHFNKHLTCLMKTNQHST---AIALF-NQNEYNNFITPCIITLTIIITCFFHLGH 87

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           VS  F  FG+IL+  +  +    N+++KGL     +++A     ++   G   N ++Y  
Sbjct: 88  VSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGI 147

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEI--GVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           LINGLC  G    A+NL   +     +   G   K N V YS +ID LC+ GFVD+    
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           + +M    + P+  TY SLI GLC    + E   L  EM+ +G+  SV  F V++D LCK
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           N  + EA  + D MV RG  PN  T   LM G+CL G ++ A ELF ++   G K D  +
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN+ I+GYCK   V +A+ ++ EM  +G+ P +VTYN+L   L +  +V  A ++   M 
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R G+  D  T    +DGLCK+  + +A+ LF  L       D+ +Y  LI G C S R+ 
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMG 447

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  L   +    LVP++VTY+ +I GLC  G++  A  L  +M      PD IT+ +L+
Sbjct: 448 EAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILL 507

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               +     +   L ++M ++ + PD    +I++D   K+E
Sbjct: 508 DALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 150/448 (33%), Positives = 234/448 (52%), Gaps = 20/448 (4%)

Query: 69  SFNILLASLAKNKHYDTRLN------------ATGLF--PNLYTYNILINCFCKIGRVSL 114
           S+ IL+  L +N   +  +N              G F   N+  Y+I+I+C C+ G V  
Sbjct: 144 SYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
           GF  +  ++ +   PN  T+ SLI+GL    + +E   L  ++   G + +V  +  LI+
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GLC+ G  + A  +F+EM N   E      PN VT + ++ G C +G VD A+ LF  + 
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYE------PNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           +     DV TYN  IHG C      +A R+F EM  +GV P++VT+N ++D LCK  ++ 
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  ++  M + G+ P+  T   L+DG C   ++++A  LF  +   G   D  SY ILI
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G C ++ + EA++L R+M  K + P +VTY+ L  GL    ++ +A +L +EM   G  
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            DT TY+  +D L K  ++ EAV LF  +     E D+  Y  +IDG CKS R+  A  L
Sbjct: 498 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINL 557

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           F  +    LVP++VTY I+   +   G 
Sbjct: 558 FREMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 220/444 (49%), Gaps = 15/444 (3%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  ++I++  L +N   D        +   G+ PN +TY  LI   C +G+   GF    
Sbjct: 185 VVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVD 244

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++R     +   F  LI GL     ++EA  +F ++   G EPN++T   L+ G C  G
Sbjct: 245 EMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKG 304

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +  +A  LF+ +    GE G   K +  TY+  I G CK G V  A  +F +M  E + P
Sbjct: 305 NVDMARELFDAI----GEWGF--KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVP 358

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++VTYNSLI  LC A + + A  +   M   G+ P +VT  +++D LCK++++D+A  L 
Sbjct: 359 NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLF 418

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + +V+ G+ P+  +Y  L+ G C   ++  A  L   M         V+Y+ LI+G C++
Sbjct: 419 NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 478

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +  A  L  EM  KG  P  +TY+ L   L++   ++ A+ LF++M + G+  D   Y
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCY 538

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  IDG CK+  I EA+ LFR + +     DI  Y  L + + KSG   + W+    +  
Sbjct: 539 TIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRD 598

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMD 504
               P V+ Y   +  LC    +D
Sbjct: 599 INPPPRVLKY---LAALCKSEHLD 619



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 8/197 (4%)

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            F +  V  +  +F ++ + G   DT    T + GLC NG +++A+E    +      L+
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 452 IQAYNCLIDGLCKSGRLKFAWELF-------CSLPHGVLVP-NVVTYNIMIQGLCNDGQM 503
             +Y  LI+GLC++GR+  A  L             G  V  NVV Y+I+I  LC +G +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+  + + +M  N   P+  T+  LI G   + +  +   L+ +M  + +     + +++
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 564 VDLLVKNEISLKSLPSF 580
           +D L KN + +++   F
Sbjct: 262 IDGLCKNGMLVEAREMF 278


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 174/526 (33%), Positives = 271/526 (51%), Gaps = 31/526 (5%)

Query: 65  PPVSSFNILLASLAK--------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P V S+N +L S+ +         K Y   + A+G+  N+++YNILI  FC  G + +G 
Sbjct: 165 PGVLSYNAILDSIVRCRKPVIFAEKVYREMI-ASGVSLNVFSYNILIRGFCAAGNLEMGL 223

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  + R+   PN  T+N++I       RI EA  L   +   G EPN++TYN +INGL
Sbjct: 224 RFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGL 283

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR G       +  EM            P+ VTY+T+++G CK G   +A  L  +M   
Sbjct: 284 CRVGRIEETSGVLAEMDRKG------FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN 337

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + PDVVTY SLI+ +C A + N A   F +M  +G++P+ VT+  +++   +   MDEA
Sbjct: 338 GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEA 397

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            R+ D M++ G  P   TYN L++G C+ G++  A  L   ME  G   D VSY+ +I G
Sbjct: 398 YRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG 457

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +C+ +E++ A  +  EMV KG+ P  +TY++L  GL E  ++  A  LF EM    +  D
Sbjct: 458 FCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT+ I+G CK G + EA+ L   +       D   YN LI+GL K  R + A  L  
Sbjct: 518 EFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLL 577

Query: 477 SLPHGVLVPNVVTYNIMIQ---------------GLCNDGQMDKARDLFLDMEENAAAPD 521
            L +   +PN +TY+ +I+               G C  G M++A  +F  M +    P+
Sbjct: 578 KLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPN 637

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDL 566
              ++++IHG  R     K ++L  +M +   +P   +I+++V  L
Sbjct: 638 EAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 253/490 (51%), Gaps = 22/490 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGR-VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G  P + +YN +++   +  + V      +  ++ S  + N  ++N LI+G  A   +  
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
               F +++   C PNV+TYNT+I   C+      A  L   M    G  G+  +PN +T
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM----GLEGL--EPNLLT 275

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +I+GLC+ G +++   +  +M  +   PD VTYN+L++G C   ++++A  L  EM+
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+ P VVT+  +++ +CK   ++ A    D M  RG+RPN  TY +L++GF   G ++
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  ++  M   G     V+YN L+NG+C +  +EEA+ L R M  KG+ P VV+Y+T+ 
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G     +++ A ++  EM   GV+ D  TY++ I GLC+   + EA +LF+ +      
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  LI+G CK G L  A  L   +     +P+ VTYN++I GL    +  +A+ L
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRL 575

Query: 510 FLDMEENAAAPDVITFDMLIH---------------GFIRINEPSKVNELLHKMKEKKVM 554
            L +  + + P+ IT+D LI                GF      ++ +++   M ++   
Sbjct: 576 LLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQK 635

Query: 555 PDASIVSIVV 564
           P+ ++ ++++
Sbjct: 636 PNEAVYNVII 645



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 236/441 (53%), Gaps = 7/441 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI-ALNL 188
           ++A F+ ++K     + I +A  +    K  G  P V++YN +++ + R    +I A  +
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV 190

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
           + EM      I      N  +Y+ +I G C  G ++     F +M+     P+VVTYN++
Sbjct: 191 YREM------IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTV 244

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I   C     +EA +L   M  +G++P+++T+N++++ LC+  +++E S +L  M ++G 
Sbjct: 245 IGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGF 304

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  TYNTL++G+C +G  ++A  L   M   G   D V+Y  LIN  CK   +  A+ 
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
            + +M  +G++P  VTY +L  G  +   ++ A +++DEM R G      TY   ++G C
Sbjct: 365 FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
            +G + EA+ L R +       D+ +Y+ +I G C+   L  A+++   +    + P+ +
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY+ +IQGLC   ++++A DLF +M   +  PD  T+  LI+G+ +  + ++   L  +M
Sbjct: 485 TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
            +K  +PD    +++++ L K
Sbjct: 545 IKKGFLPDTVTYNVLINGLNK 565



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 196/367 (53%), Gaps = 28/367 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +   MLR +  PP V ++  L+ ++ K  + +       +++  GL PN  TY  
Sbjct: 325 HQALVLHSEMLR-NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN F + G +   +  +  ++RS F P   T+N+L+ G     R+ EA  L   ++  G
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+V++Y+T+I G CR      A  +  EM     E GV   P+ +TYS++I GLC++ 
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV----EKGV--SPDAITYSSLIQGLCEQR 497

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +++A  LF +M ++++ PD  TY SLI+G C   D NEA  L  EM+ +G  P  VT+N
Sbjct: 498 RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYN 557

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD---------------GFCLMG 326
           V+++ L K  +  EA RLL  +      PN  TY+TL++               GFC+ G
Sbjct: 558 VLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +N A+++F SM     K ++  YN++I+G+C++  V +A  LY+EMV  G  P  VT  
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTII 677

Query: 387 TLFLGLF 393
            L   L+
Sbjct: 678 ALVKALY 684



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 187/391 (47%), Gaps = 36/391 (9%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS-------------- 247
           +C  ++  +  ++       F++KA  +    K     P V++YN+              
Sbjct: 127 MCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF 186

Query: 248 ----------------------LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
                                 LI G C A +     R F EM      P+VVT+N ++ 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             CK +++DEA +LL  M   G+ PN  TYN +++G C +G+I     +   M+  G   
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D V+YN L+NGYCK     +AL L+ EM+  G+ P VVTY +L   + +   +  A++ F
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D+M   G+  +  TYT+ I+G  + G++ EA  ++  +        I  YN L++G C S
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           GR++ A  L   +    L P+VV+Y+ +I G C   ++D+A  +  +M E   +PD IT+
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             LI G       ++  +L  +M  K ++PD
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 171/529 (32%), Positives = 270/529 (51%), Gaps = 31/529 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P V S+N +L ++ +++    +L+A  ++         PN+YTYNILI  FC +G +  G
Sbjct: 175 PGVLSYNSVLDAIVRSRG-SVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKG 233

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
              FG + R+   PN  T+N+LI       RI EA  L   + + G +PN+I+YN +ING
Sbjct: 234 LGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIING 293

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LCR G    A  + EEM    G  G    P+ VTY+T+++G CKEG   +A  +  +M  
Sbjct: 294 LCREGSMKEAWEILEEM----GYKGFT--PDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 347

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             ++P VVTY +LI+ +C A + N A   F +M  +G++P+  T+  ++D   +   ++E
Sbjct: 348 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 407

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A R+L+ M + G  P+  TYN  + G C++ ++  A  +   M   G   D VSY+ +I+
Sbjct: 408 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 467

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+C+  E++ A  + +EMV KG+ P  VTY++L  GL E+ ++  A  L  EM   G+  
Sbjct: 468 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 527

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  TYTT I+  C  G + +A+ L   +       D   Y+ LI+GL K  R + A  L 
Sbjct: 528 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 587

Query: 476 CSLPHGVLVPNVVTYNIMIQ---------------GLCNDGQMDKARDLFLDMEENAAAP 520
             L +   VP+ VTY+ +I+               G C  G M +A  +F  M E    P
Sbjct: 588 FKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKP 647

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               ++++IHG  R     K   L  +M     +P    V  ++  L K
Sbjct: 648 GEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 696



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 151/469 (32%), Positives = 254/469 (54%), Gaps = 16/469 (3%)

Query: 70  FNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA---FG 120
           F++++ S +     D  +N      ++G  P + +YN +++   +  R S+   A   + 
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVR-SRGSVKLSAEEVYR 203

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++RS  +PN  T+N LI+G  +   + +    F +++  GC PNV+TYNTLI+  C+ G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L + M++         +PN ++Y+ II+GLC+EG + +A  +  +M  +   P
Sbjct: 264 RIDEAFGLLKSMSSKG------MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D VTYN+L++G C   ++++A  +  EM+  GV PSVVT+  +++ +CK R ++ A    
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M  RG+RPN  TY TL+DGF   G +N A  +   M   G     V+YN  I+G+C  
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + +EEAL + +EMV KG+ P VV+Y+T+  G     +++ A ++  EM   GV+ D  TY
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           ++ I GLC+   + EA +L + +  +    D   Y  LI+  C  G L  A  L   + H
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
              +P+ VTY+++I GL    +  +A+ L   +    + P  +T+D LI
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 229/462 (49%), Gaps = 16/462 (3%)

Query: 125 SCFTPNAATFNSLIKGLHAESR---IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           S F P   ++NS++  +   SR    + A  ++ ++      PNV TYN LI G C  G 
Sbjct: 171 SGFMPGVLSYNSVLDAI-VRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGE 229

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
               L  F EM   NG     C PN VTY+T+ID  CK G +D+A  L   M  + + P+
Sbjct: 230 LQKGLGCFGEMER-NG-----CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPN 283

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           +++YN +I+GLC      EA  +  EM  +G  P  VT+N +++  CK     +A  +  
Sbjct: 284 LISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHA 343

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            MV+ GV P+  TY  L++  C    +NRA E F  M   G + ++ +Y  LI+G+ +  
Sbjct: 344 EMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQG 403

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            + EA  +  EM   G  P+VVTYN    G   + ++E AL +  EM   G+A D  +Y+
Sbjct: 404 LLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYS 463

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I G C+ G +  A ++ + +       D   Y+ LI GLC+  RL  A +L   +   
Sbjct: 464 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 523

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            L P+  TY  +I   C +G ++KA  L  +M      PD +T+ +LI+G  +     + 
Sbjct: 524 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKN--EISLKSLPSFL 581
             LL K+  ++ +P      +  D L++N   I  KS+ + +
Sbjct: 584 KRLLFKLIYEESVPS----DVTYDTLIENCSNIEFKSVVALI 621



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 227/446 (50%), Gaps = 8/446 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT--MI 184
           +  ++A F+ ++K     + I +A       K+ G  P V++YN++++ + R+  +  + 
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A  ++ EM      I     PN  TY+ +I G C  G + K    F +M+     P+VVT
Sbjct: 198 AEEVYREM------IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVT 251

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN+LI   C     +EA  L   M  +G+QP+++++NVI++ LC+   M EA  +L+ M 
Sbjct: 252 YNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG 311

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            +G  P+  TYNTL++G+C  G  ++A  +   M   G     V+Y  LIN  CK + + 
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A+  + +M  +G++P   TY TL  G      +  A ++ +EM   G +    TY  FI
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            G C    + EA+ + + +       D+ +Y+ +I G C+ G L  A+++   +    + 
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+ VTY+ +IQGLC   ++ +A DL  +M +    PD  T+  LI+ +    + +K   L
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKN 570
             +M  K  +PDA   S++++ L K 
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQ 577



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 187/368 (50%), Gaps = 2/368 (0%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE- 260
           V   ++  +  ++        +D+A       K     P V++YNS++  +  +    + 
Sbjct: 137 VYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKL 196

Query: 261 -AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A+ ++ EM+   V P+V T+N+++   C   ++ +       M + G  PN  TYNTL+
Sbjct: 197 SAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLI 256

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           D +C MG+I+ A  L  SM S G + + +SYN++ING C+   ++EA  +  EM  KG  
Sbjct: 257 DAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFT 316

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  VTYNTL  G  +      AL +  EM R+GV+    TYT  I+ +CK   +  A+E 
Sbjct: 317 PDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF 376

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  +RI     + + Y  LIDG  + G L  A+ +   +      P+VVTYN  I G C 
Sbjct: 377 FDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCV 436

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
             +M++A  +  +M E   APDV+++  +I GF R  E  +  ++  +M EK V PDA  
Sbjct: 437 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 496

Query: 560 VSIVVDLL 567
            S ++  L
Sbjct: 497 YSSLIQGL 504



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 192/368 (52%), Gaps = 28/368 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  I   M+R   SP  V ++  L+ S+ K ++ +       ++   GL PN  TY  
Sbjct: 336 HQALVIHAEMVRNGVSPS-VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ F + G ++  +     +  S F+P+  T+N+ I G     R+ EA  +  ++   G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+V++Y+T+I+G CR G    A  + +EM     E GV   P+ VTYS++I GLC+  
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMV----EKGV--SPDAVTYSSLIQGLCEMR 508

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A  L  +M D  + PD  TY +LI+  C   D N+A  L  EM+ +G  P  VT++
Sbjct: 509 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 568

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD---------------GFCLMG 326
           V+++ L K  +  EA RLL  ++     P+  TY+TL++               GFC+ G
Sbjct: 569 VLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKG 628

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A+ +F SM     K  +  YN++I+G+C+   + +A +LY+EM+  G  P  VT  
Sbjct: 629 LMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVI 688

Query: 387 TLFLGLFE 394
           TL   LF+
Sbjct: 689 TLIKALFK 696



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 51/303 (16%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNI 101
           NEA+ I + M     SP  V ++N  +      +  +  L         GL P++ +Y+ 
Sbjct: 406 NEAYRILNEMTESGFSPS-VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+ FC+ G +   F     ++    +P+A T++SLI+GL    R+ EA  L  ++   G
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIGVVCK-- 204
             P+  TY TLIN  C  G    AL+L +EM                NG  +     +  
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584

Query: 205 ------------PNTVTYSTIID---------------GLCKEGFVDKAKALFLQMKDEN 237
                       P+ VTY T+I+               G C +G + +A  +F  M + N
Sbjct: 585 RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P    YN +IHG C   +  +A  L+ EM+  G  P  VT   ++  L K    +E S
Sbjct: 645 HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 704

Query: 298 RLL 300
            ++
Sbjct: 705 EVI 707


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/527 (31%), Positives = 265/527 (50%), Gaps = 17/527 (3%)

Query: 48  NEAFCIFDYMLRMHP-SPPPVSSFNILLASLAKNKHY---DTRLNATGLFPNLYTYNILI 103
           +EA  +FD M      + PPV   NIL+  L  +      +    A G    + TYN ++
Sbjct: 167 DEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSATVVTYNTMV 226

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N +C+ GR+     A   I    F P+  TFN LI+ L    RI +A A+F  +   GC 
Sbjct: 227 NGYCRAGRIE---DARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCS 283

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           P+V+TY+ L++  C+      A+ L +EM A G       C+P+ VTY+ +I+ +C EG 
Sbjct: 284 PSVVTYSILLDATCKESGYRQAMALLDEMRAKG-------CEPDIVTYNVLINAMCNEGD 336

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD+A  +   +      PD VTY  ++  LC +  W E + L  EM      P  VTFN 
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I+  LC+   +D A  ++D M + G   +  TY++++DG C +G+++ A EL   ++S G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK D ++Y  ++ G C  ++ E A  L  EM+     P  VT+NT+   L +   V+ A+
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++ ++M  +G + D  TY   IDGLC    I +A+EL   L+   C+ DI  +N L+ GL
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C   R + A +L  ++      P+ +T+N +I  LC  G + +A +    M EN   P+ 
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            T+ +++   ++  +     ELL  M      PD    + V+  L K
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGMTNGT--PDLITYNTVISNLTK 681



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 251/526 (47%), Gaps = 15/526 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  +FD ML    SP  V +++ILL +  K   Y         + A G  P++ TYN+L
Sbjct: 269 DALAVFDDMLHRGCSPS-VVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C  G V         +      P+A T+  ++K L    R  E   L  ++ +  C
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ +T+NT++  LC+ G    A+ + + M+         C  + VTYS+I+DGLC  G 
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG------CVADIVTYSSILDGLCDVGR 441

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  L  ++K     PD + Y +++ GLC    W  A+ L  EM+     P  VTFN 
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LC+   +D A R+++ M + G  P+  TYN ++DG C    I+ A EL   ++S G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK D V++N L+ G C     E+A  L   M+     P  +T+NT+   L +   +  A+
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +    M  +G   ++ TY+  +D L K G    A+EL   +       D+  YN +I  L
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNL 679

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+G+++ A +L   +    L P+  TY  +  G+C +   D+A  +   +++   +PD 
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDT 739

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
             ++ ++ GF R        +    M     MPD S   I+++ L 
Sbjct: 740 TFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 229/471 (48%), Gaps = 14/471 (2%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R+C  P     N LIK L ++ R+ +A  +F    A G    V+TYNT++NG CR G   
Sbjct: 182 RNC--PPVVPCNILIKRLCSDGRVSDAERVFA---ALGPSATVVTYNTMVNGYCRAGRIE 236

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  L           G+   P+T T++ +I  LC  G +  A A+F  M     +P VV
Sbjct: 237 DARRLIN---------GMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVV 287

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY+ L+   C  + + +A  L  EM  +G +P +VT+NV+++ +C    +DEA  +L  +
Sbjct: 288 TYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNL 347

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G +P+A TY  ++   C   +    EEL   M S  C  D+V++N ++   C+   V
Sbjct: 348 PSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLV 407

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + A+ +   M   G    +VTY+++  GL ++ +V+ A++L   ++  G   DT  YTT 
Sbjct: 408 DRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTV 467

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + GLC       A EL   +    C  D   +N ++  LC+ G +  A  +   +     
Sbjct: 468 LKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGC 527

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P++VTYN +I GLCN+  +D A +L  D++     PD++TF+ L+ G   ++      +
Sbjct: 528 SPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQ 587

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           L+  M      PD    + V+  L +  +  +++ +  +    G V  S+ 
Sbjct: 588 LMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSST 638



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 238/481 (49%), Gaps = 20/481 (4%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGL 92
           EGD++     EA  I    L  H   P   ++  +L SL  ++ +         + +   
Sbjct: 334 EGDVD-----EALNILSN-LPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+  T+N ++   C+ G V         +       +  T++S++ GL    R+ +A  
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L ++LK++GC+P+ I Y T++ GLC T     A  L  EM   +      C P+ VT++T
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD------CPPDEVTFNT 501

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++  LC++G VD+A  +  QM +   +PD+VTYN +I GLC+ +  ++A  L  ++   G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P +VTFN ++  LC   + ++A +L+  M++    P+  T+NT++   C  G + +A 
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E    M   GC  +  +Y+I+++   K  + + AL L   M +    P ++TYNT+   L
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNL 679

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  ++E AL L   M  +G+  DT TY +   G+C+      AV + R ++      D 
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDT 739

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN ++ G C+  R   A + F  +     +P+  TY I+++ L   G +D+A+ L   
Sbjct: 740 TFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLAS 799

Query: 513 M 513
           +
Sbjct: 800 L 800



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 202/412 (49%), Gaps = 31/412 (7%)

Query: 173 INGLCRTGHTMIALNLFEEMANGNGE-----------IGVVC-----------------K 204
           +  L + G    AL LF+ MA+G G            I  +C                  
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
              VTY+T+++G C+ G ++ A+ L   M      PD  T+N LI  LC      +A  +
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAV 273

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +M+ +G  PSVVT+++++D  CK     +A  LLD M  +G  P+  TYN L++  C 
Sbjct: 274 FDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCN 333

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G ++ A  +  ++ S GCK D V+Y  ++   C ++  +E   L  EM S    P  VT
Sbjct: 334 EGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVT 393

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +NT+   L +   V+ A+++ D M   G  AD  TY++ +DGLC  G + +AVEL   L+
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK 453

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C+ D  AY  ++ GLC + + + A EL   +      P+ VT+N ++  LC  G +D
Sbjct: 454 SYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVD 513

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +A  +   M EN  +PD++T++ +I G    +      ELL  ++     PD
Sbjct: 514 RAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 8/320 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+  T+N ++   C+ G V        ++  +  +P+  T+N +I GL  ES I +A  L
Sbjct: 494 PDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
            + L++ GC+P+++T+NTL+ GLC       A  L   M   N      C P+ +T++T+
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN------CPPDELTFNTV 607

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I  LC++G + +A      M +    P+  TY+ ++  L  A     A  L   M +   
Sbjct: 608 ITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG-- 665

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P ++T+N ++  L K  KM+EA  LL +MV  G+ P+  TY +L  G C     +RA  
Sbjct: 666 TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVR 725

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +   ++  G   D   YN ++ G+C+++  + A+  +  MVS G  P   TY  L   L 
Sbjct: 726 MLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785

Query: 394 EIHQVEHALKLFDEMQRDGV 413
               ++ A +L   +   GV
Sbjct: 786 YGGLLDEAKRLLASLCSLGV 805



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 150/321 (46%), Gaps = 14/321 (4%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   +FN ++ASL +    D       +++  G  P++ TYN +I+  C    +     
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +      P+  TFN+L+KGL    R  +A  L   +    C P+ +T+NT+I  LC
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A+   + MA  NG     C PN+ TYS ++D L K G    A  L   M   N
Sbjct: 613 QKGLLTQAIETLKIMAE-NG-----CVPNSSTYSIVVDALLKAGKAQAALELLSGMT--N 664

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD++TYN++I  L  A    EA  L   M+  G+ P   T+  +   +C+    D A 
Sbjct: 665 GTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           R+L  +   G+ P+   YN ++ GFC   + + A + F  M S GC  D+ +Y IL+   
Sbjct: 725 RMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784

Query: 358 CKNKEVEEALSLYREMVSKGI 378
                ++EA  L   + S G+
Sbjct: 785 AYGGLLDEAKRLLASLCSLGV 805


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 270/500 (54%), Gaps = 6/500 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
            +++  G+ P++ T+N+LI   C+  ++    +    +      P+  TF ++++G   E
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEE 237

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
             +  A  +  ++  FGC  + ++ N +++G C+ G    ALN  +EM+N +G       
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF----- 292

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+  T++T+++GLCK G V  A  +   M  E  +PDV TYNS+I GLC   +  EA   
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M+ +   P+ VT+N ++  LCK  +++EA+ L  ++  +G+ P+ CT+N+L+ G CL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                 A ELF  M S GC+ D+ +YN+LI+  C   +++EAL++ ++M   G   +V+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNTL  G  + +++  A ++FDEM+  GV+ ++ TY T IDGLCK+  + +A +L   + 
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +   + D   YN L+   C+ G +K A ++  ++      P++VTY  +I GLC  G+++
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK-KVMPDASIVSIV 563
            A  L   ++    A     ++ +I G  R  + ++   L  +M E+ +  PDA    IV
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652

Query: 564 VDLLVKNEISLKSLPSFLVQ 583
              L      ++    FLV+
Sbjct: 653 FRGLCNGGGPIREAVDFLVE 672



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 178/548 (32%), Positives = 273/548 (49%), Gaps = 53/548 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTY------------------- 99
           P VS+FN+L+ +L +             + + GL P+  T+                   
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 100 ----------------NILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGL 141
                           N++++ FCK GRV  +L FI      +  F P+  TFN+L+ GL
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ-EMSNQDGFFPDQYTFNTLVNGL 305

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                +  A  +   +   G +P+V TYN++I+GLC+ G    A+   ++M   +     
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD----- 360

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
            C PNTVTY+T+I  LCKE  V++A  L   +  + I PDV T+NSLI GLC   +   A
Sbjct: 361 -CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             LF EM  +G +P   T+N+++D LC   K+DEA  +L  M   G   +  TYNTL+DG
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           FC   KI  AEE+F  ME  G   + V+YN LI+G CK++ VE+A  L  +M+ +G KP 
Sbjct: 480 FCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPD 539

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TYN+L         ++ A  +   M  +G   D  TY T I GLCK G +  A +L R
Sbjct: 540 KFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCN- 499
           ++++    L   AYN +I GL +  +   A  LF   L      P+ V+Y I+ +GLCN 
Sbjct: 600 SIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNG 659

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G + +A D  +++ E    P+  +  ML  G + ++    + +L++ + +K    +   
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEE- 718

Query: 560 VSIVVDLL 567
           VS+V  LL
Sbjct: 719 VSMVKGLL 726



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 254/536 (47%), Gaps = 14/536 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRLNAT-------GLFPNLYTYNILINCFCKIGRVSLGFIAF 119
            S F IL+ S A+ +  D  L          GL P+ + YN ++N       + L  IA 
Sbjct: 118 TSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAH 177

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            ++      P+ +TFN LIK L    ++  A  +   + ++G  P+  T+ T++ G    
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEE 237

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-I 238
           G    AL + E+M     E G  C  + V+ + I+ G CKEG V+ A     +M +++  
Sbjct: 238 GDLDGALRIREQMV----EFG--CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  T+N+L++GLC A     A  +   M+ +G  P V T+N ++  LCK  ++ EA  
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            LD M+ R   PN  TYNTL+   C   ++  A EL   + S G   D  ++N LI G C
Sbjct: 352 FLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             +    A+ L+ EM SKG +P   TYN L   L    +++ AL +  +M+  G A    
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T IDG CK   I EA E+F  + +     +   YN LIDGLCKS R++ A +L   +
Sbjct: 472 TYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+  TYN ++   C  G + KA D+   M  N   PD++T+  LI G  +    
Sbjct: 532 IMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
              ++LL  ++ K +       + V+  L +   + +++  F     Q E     V
Sbjct: 592 EVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAV 647



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 236/487 (48%), Gaps = 52/487 (10%)

Query: 128 TPNAATFNS----LIKGLHAESRIMEAAALF---TKLKAFGCEPNVITYNTLINGLCRTG 180
           +PN+A  +S    L+  L +++    A  LF   +K   F  EP +  Y  ++  L R+G
Sbjct: 40  SPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPAL--YEEILLRLGRSG 97

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NIN 239
                  + E+M N   E+G      T  +  +I+   +    D+   +   M D+  + 
Sbjct: 98  SFDDMRKILEDMKNSGCEMG------TSPFLILIESYAQFELQDEILGVVHWMIDDFGLK 151

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD   YN +++ L   N+    +    +M   G++P V TFNV++  LC+  ++  A  +
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L+ M   G+ P+  T+ T+M G+   G ++ A  +   M   GC   +VS N++++G+CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 360 NKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              VE+AL+  +EM ++ G  P   T+NTL  GL +   V+HA+++ D M ++G   D  
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---- 474
           TY + I GLCK G + EAVE    +    C  +   YN LI  LCK  +++ A EL    
Sbjct: 332 TYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 475 -----------FCSLPHGVLV--------------------PNVVTYNIMIQGLCNDGQM 503
                      F SL  G+ +                    P+  TYN++I  LC+ G++
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A ++   ME +  A  VIT++ LI GF + N+  +  E+  +M+   V  ++   + +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 564 VDLLVKN 570
           +D L K+
Sbjct: 512 IDGLCKS 518


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 282/543 (51%), Gaps = 12/543 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +E   + D+M+      P    +N +L  L              +++  G+ P++ T+N+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI   C+  ++    +    +      P+  TF ++++G   E  +  A  +  ++  FG
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  + ++ N +++G C+ G    ALN  +EM+N +G       P+  T++T+++GLCK G
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V  A  +   M  E  +PDV TYNS+I GLC   +  EA  +  +M+ +   P+ VT+N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  LCK  +++EA+ L  ++  +G+ P+ CT+N+L+ G CL      A ELF  M S 
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC+ D+ +YN+LI+  C   +++EAL++ ++M   G   +V+TYNTL  G  + ++   A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++FDEM+  GV+ ++ TY T IDGLCK+  + +A +L   + +   + D   YN L+  
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C+ G +K A ++  ++      P++VTY  +I GLC  G+++ A  L   ++       
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEK-KVMPDASIVSIVVDLLVKNEISLKSLPSF 580
              ++ +I G  R  + ++   L  +M E+ +  PDA    IV   L      ++    F
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669

Query: 581 LVQ 583
           LV+
Sbjct: 670 LVE 672



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 243/495 (49%), Gaps = 14/495 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRLNAT-------GLFPNLYTYNILINCFCKIGRVSLGFIAF 119
            S+F IL+ S A+ +  D  L+         GL P+ + YN ++N       + L  I+ 
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            ++      P+ +TFN LIK L    ++  A  +   + ++G  P+  T+ T++ G    
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-I 238
           G    AL + E+M     E G  C  + V+ + I+ G CKEG V+ A     +M +++  
Sbjct: 238 GDLDGALRIREQMV----EFG--CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  T+N+L++GLC A     A  +   M+ +G  P V T+N ++  LCK  ++ EA  
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +LD M+ R   PN  TYNTL+   C   ++  A EL   + S G   D  ++N LI G C
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             +    A+ L+ EM SKG +P   TYN L   L    +++ AL +  +M+  G A    
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T IDG CK     EA E+F  + +     +   YN LIDGLCKS R++ A +L   +
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+  TYN ++   C  G + KA D+   M  N   PD++T+  LI G  +    
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591

Query: 539 SKVNELLHKMKEKKV 553
              ++LL  ++ K +
Sbjct: 592 EVASKLLRSIQMKGI 606



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 225/510 (44%), Gaps = 68/510 (13%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKA--------------------------- 159
           F+P  A +  ++  L       +   +   +K+                           
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138

Query: 160 ---------FGCEPNVITYNTLIN--------GLCRTGHT-MIALNLFEEMANGNGEIGV 201
                    FG +P+   YN ++N         L    H  M    +  +++  N  I  
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198

Query: 202 VCKPNTV--------------------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           +C+ + +                    T++T++ G  +EG +D A  +  QM +   +  
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V+ N ++HG C      +A     EM +Q G  P   TFN +++ LCK   +  A  ++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D+M+Q G  P+  TYN+++ G C +G++  A E+   M +  C  + V+YN LI+  CK 
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +VEEA  L R + SKGI P V T+N+L  GL        A++LF+EM+  G   D  TY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP- 479
              ID LC  G + EA+ + + + +  C   +  YN LIDG CK+ + + A E+F  +  
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           HGV   N VTYN +I GLC   +++ A  L   M      PD  T++ L+  F R  +  
Sbjct: 499 HGV-SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           K  +++  M      PD      ++  L K
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCK 587


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 175/552 (31%), Positives = 281/552 (50%), Gaps = 35/552 (6%)

Query: 44  VITPNEAFCIFD------YMLRMHPSPPPVSSFNILLASLAKNKHYDT-------RLNAT 90
           V+      C+ D      ++ + H   P V S+N +L +  ++K   +        +  +
Sbjct: 140 VVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQS 199

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
            + PN++TYNILI  FC  G + +    F R+ +    PN  T+N+LI G     +I + 
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   G EPN+I+YN +INGLCR G       +  EM N  G        + VTY
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEM-NKRGY-----SLDEVTY 313

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I G CKEG   +A  +  +M    ++P V+TY SLIH +C A + N A     +M  
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P+  T+  ++D   +   M+EA R+L  M+  G  P+  TYN L++G C+ GK+  
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVD 433

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +   M+  G   D VSY+ +++G+C++ +V+EAL + R+MV+KGIKP  +TY++L  
Sbjct: 434 AIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQ 493

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  E  + + A  LFDEM R G+  D  TYT  I+  C  G + +A++L   +       
Sbjct: 494 GFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLP 553

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ--------------- 495
           D+  Y+ LI+GL K  R + A  L   L +   VP+ VTY+ +I+               
Sbjct: 554 DVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM-KEKKVM 554
           G C  G M +A  +F  M E    PD   ++++IHG  R  +  K   L  +M K   ++
Sbjct: 614 GFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLL 673

Query: 555 PDASIVSIVVDL 566
              +++++V  L
Sbjct: 674 HTVTVIALVKTL 685



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 260/515 (50%), Gaps = 35/515 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLAS--LAKN-----KHYDTRLNATGLFPNLYTYNILINC 105
           +F  ML+   SP  V ++NIL+    LA N     + +D R+   G  PN+ TYN LI+ 
Sbjct: 192 VFKEMLQSQVSPN-VFTYNILIRGFCLAGNLDVALRFFD-RMEKKGCLPNVVTYNTLIDG 249

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           +CK+ ++  GF     +      PN  ++N +I GL  E R+ E + + T++   G   +
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
            +TYNTLI G C+ G+   AL +  EM            P+ +TY+++I  +CK G +++
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHG------LSPSVITYTSLIHSMCKAGNMNR 363

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A     QM+   + P+  TY +L+ G       NEA R+  EM+D G  PSVVT+N +++
Sbjct: 364 ATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALIN 423

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             C   KM +A  +L+ M ++G+ P+  +Y+T++ GFC    ++ A  +   M + G K 
Sbjct: 424 GHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKP 483

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D ++Y+ LI G+C+ +  +EA  L+ EM+  G+ P   TY  L         ++ A++L 
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLH 543

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL---------------FRTLRILKCE- 449
           +EM   GV  D  TY+  I+GL K     EA  L               + TL I  C  
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL-IENCSN 602

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           ++ ++   LI G C  G +  A ++F S+      P+   YN+MI G C  G + KA  L
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSL 662

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           + +M ++      +T   L+     +++  KVNEL
Sbjct: 663 YKEMVKSGFLLHTVTVIALVK---TLHKEGKVNEL 694



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 263/510 (51%), Gaps = 45/510 (8%)

Query: 32  FRDLTTREGDINVITPN---EAFCI---FDYMLRMHPSP------PPVSSFNILLASLAK 79
           F+++   +   NV T N     FC+    D  LR           P V ++N L+    K
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252

Query: 80  NKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
            +  D        +   GL PNL +YN++IN  C+ GR+         + +  ++ +  T
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +N+LIKG   E    +A  +  ++   G  P+VITY +LI+ +C+ G+   A    ++M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM- 371

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                +  +C PN  TY+T++DG  ++G++++A  +  +M D   +P VVTYN+LI+G C
Sbjct: 372 ----RVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A    +A  +  +M ++G+ P VV+++ ++   C++  +DEA R+   MV +G++P+  
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY++L+ GFC   +   A +LF  M  +G   D+ +Y  LIN YC   ++++A+ L+ EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHA----LKLFDEMQRDGVAADTRTYT-------- 421
           V KG+ P VVTY+ L  GL +  +   A    LKLF E   + V +D   +T        
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYE---ESVPSDVTYHTLIENCSNI 603

Query: 422 ------TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
                 + I G C  G + EA ++F ++     + D  AYN +I G C+ G ++ A+ L+
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLY 663

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             +     + + VT   +++ L  +G++++
Sbjct: 664 KEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 199/402 (49%), Gaps = 36/402 (8%)

Query: 205 PNTVTYSTIIDGLCKEGF-VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           P  ++Y+ ++D   +    +  A+ +F +M    ++P+V TYN LI G C A + + A R
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALR 226

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
            F  M  +G  P+VVT+N ++D  CK RK+D+   LL  M  +G+ PN  +YN +++G C
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLC 286

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G++     +   M   G   D+V+YN LI GYCK     +AL ++ EM+  G+ P+V+
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVI 346

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY +L   + +   +  A +  D+M+  G+  + RTYTT +DG  + GY+ EA  + + +
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM 406

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV--------------- 488
                   +  YN LI+G C +G++  A  +   +    L P+VV               
Sbjct: 407 IDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDV 466

Query: 489 --------------------TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
                               TY+ +IQG C   +  +A DLF +M      PD  T+  L
Sbjct: 467 DEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTAL 526

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           I+ +    +  K  +L ++M EK V+PD    S++++ L K 
Sbjct: 527 INAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 219/452 (48%), Gaps = 11/452 (2%)

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN-GLCRTGH 181
           L + FTP AA+ N L+K  + +  I++        + F      IT + L    L +T  
Sbjct: 42  LSANFTPEAAS-NLLLKSQNNQELILKFLTWANPHQFFTLRCKCITLHILTRFKLYKTAQ 100

Query: 182 TMI----ALNLFEEMAN----GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           T+     A  L +E A+       E   +C   +  +  ++    +   +DKA ++    
Sbjct: 101 TLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLS 160

Query: 234 KDENINPDVVTYNSLIHGLCHAN-DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +     P V++YN+++     +  + + A+ +F EM+   V P+V T+N+++   C    
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGN 220

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D A R  D M ++G  PN  TYNTL+DG+C + KI+   EL  SM   G + + +SYN+
Sbjct: 221 LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +ING C+   ++E   +  EM  +G     VTYNTL  G  +      AL +  EM R G
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           ++    TYT+ I  +CK G +  A E    +R+     + + Y  L+DG  + G +  A+
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            +   +      P+VVTYN +I G C  G+M  A  +  DM+E    PDV+++  ++ GF
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            R  +  +   +  KM  K + PD    S ++
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 452 IQAYNCLIDGLCKSGR-LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           + +YN ++D   +S R + FA  +F  +    + PNV TYNI+I+G C  G +D A   F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFF 228

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             ME+    P+V+T++ LI G+ ++ +     ELL  M  K + P+    ++V++ L + 
Sbjct: 229 DRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCR- 287

Query: 571 EISLKSLPSFLVQE 584
           E  +K + SF++ E
Sbjct: 288 EGRMKEI-SFVLTE 300


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 178/532 (33%), Positives = 265/532 (49%), Gaps = 54/532 (10%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTY------------------ 99
           PP VS+FNIL+ +L K             +   GL P+  T+                  
Sbjct: 196 PPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALR 255

Query: 100 -----------------NILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKG 140
                            N+L+N  CK GR+  +L FI         F P+  TFN+L+ G
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI----YEEEGFCPDQVTFNALVNG 311

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L     I +   +   +   G E +V TYN+LI+GLC+ G    A+ +   M + +    
Sbjct: 312 LCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD---- 367

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C+PNTVTY+T+I  LCKE  V+ A  L   +  + + PDV T+NSLI GLC  ++   
Sbjct: 368 --CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREI 425

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  LF EM ++G  P   T++++++ LC  R++ EA  LL  M   G   N   YNTL+D
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLID 485

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G C   ++  AE++F  ME +G     V+YN LING CK+K VEEA  L  +M+ +G+KP
Sbjct: 486 GLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              TY T+     +   ++ A  +   M  +G   D  TY T I GLCK G +  A +L 
Sbjct: 546 DKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL 605

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN- 499
           R++++    L  QAYN +I  LCK  R K A  LF  +      P+V+TY I+ +GLCN 
Sbjct: 606 RSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNG 665

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            G + +A D  ++M E    P+  +F  L  G   ++    + +L++ + EK
Sbjct: 666 GGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEK 717



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 170/546 (31%), Positives = 268/546 (49%), Gaps = 50/546 (9%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAK-NK-----HYDTRLNATGLFPNLYTYNILINCF 106
           +F  M R     P    +N+ L+ L K NK        +++ A  + P++ T+NILI   
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRAL 209

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK  ++    +    +      P+  TF +L++G   E+ +  A  +   +   GCE   
Sbjct: 210 CKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTS 269

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           ++ N L+NGLC+ G    AL    E      E G    P+ VT++ +++GLC+ G + + 
Sbjct: 270 VSVNVLVNGLCKEGRIEEALRFIYE------EEGFC--PDQVTFNALVNGLCRTGHIKQG 321

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +   M ++    DV TYNSLI GLC   + +EA  +   M+ +  +P+ VT+N ++  
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGT 381

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LCK   ++ A+ L  ++  +GV P+ CT+N+L+ G CL      A ELF  M+  GC  D
Sbjct: 382 LCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD 441

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           + +Y+ILI   C  + ++EAL L +EM   G    VV YNTL  GL + ++V  A  +FD
Sbjct: 442 EFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL-------------FRTLRILK------ 447
           +M+  GV+  + TY T I+GLCK+  + EA +L             F    +LK      
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG 561

Query: 448 ----------------CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
                           CE DI  Y  LI GLCK+GR+  A +L  S+    +V     YN
Sbjct: 562 DIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYN 621

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP-SKVNELLHKMKE 550
            +IQ LC   +  +A  LF +M E    PDVIT+ ++  G      P  +  +   +M E
Sbjct: 622 PVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLE 681

Query: 551 KKVMPD 556
           K ++P+
Sbjct: 682 KGILPE 687



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 162/549 (29%), Positives = 266/549 (48%), Gaps = 22/549 (4%)

Query: 54  FDYML----RMHPSPPPV--SSFNILLASLAKNKHYDTRLNATGLF--------PNLYTY 99
           FD ML    +MH S  PV  S+F I L + A + H    +N   L         P+   Y
Sbjct: 108 FDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFY 167

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+ ++   K  ++ L      +++     P+ +TFN LI+ L    ++  A  +   +  
Sbjct: 168 NVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN 227

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           +G  P+  T+ TL+ G         AL + E M          C+  +V+ + +++GLCK
Sbjct: 228 YGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESG------CELTSVSVNVLVNGLCK 281

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG +++A  L    ++E   PD VT+N+L++GLC      +   +   M+++G +  V T
Sbjct: 282 EGRIEEA--LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYT 339

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N ++  LCK  ++DEA  +L  MV R   PN  TYNTL+   C    +  A EL   + 
Sbjct: 340 YNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLT 399

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           S G   D  ++N LI G C     E A+ L+ EM  KG  P   TY+ L   L    +++
Sbjct: 400 SKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLK 459

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL L  EM+  G A +   Y T IDGLCKN  + +A ++F  + +L        YN LI
Sbjct: 460 EALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLI 519

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +GLCKS R++ A +L   +    L P+  TY  M++  C  G + +A D+  +M  N   
Sbjct: 520 NGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCE 579

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PD++T+  LI G  +       ++LL  ++ K ++      + V+  L K + + +++  
Sbjct: 580 PDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRL 639

Query: 580 FLVQERQGE 588
           F     +G+
Sbjct: 640 FREMMEKGD 648



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 206/469 (43%), Gaps = 99/469 (21%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGL 92
           E  +  I   E FC            P   +FN L+  L +  H    L         G 
Sbjct: 286 EEALRFIYEEEGFC------------PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGF 333

Query: 93  FPNLYTYNILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
             ++YTYN LI+  CK+G +     I    + R C  PN  T+N+LI  L  E+ +  A 
Sbjct: 334 ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDC-EPNTVTYNTLIGTLCKENHVEAAT 392

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L   L + G  P+V T+N+LI GLC T +  IA+ LFEEM          C P+  TYS
Sbjct: 393 ELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG------CDPDEFTYS 446

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I+ LC E  + +A  L  +M+      +VV YN+LI GLC  N   +A+ +F +M   
Sbjct: 447 ILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEML 506

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           GV  S VT+N +++ LCK+++++EA++L+D M+  G++P+  TY T++  FC  G I RA
Sbjct: 507 GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRA 566

Query: 332 EELFGSMESMGCKHDDVSYNILINGY---------------------------------- 357
            ++  +M   GC+ D V+Y  LI G                                   
Sbjct: 567 ADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQA 626

Query: 358 -CKNKEVEEALSLYREM------------------------------------VSKGIKP 380
            CK K  +EA+ L+REM                                    + KGI P
Sbjct: 627 LCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILP 686

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
              ++  L  GL  +   +  ++L + +   G  + +   T+ I G  K
Sbjct: 687 EFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSE--TSIIRGFLK 733



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 15/279 (5%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  +N L+  L KN           ++   G+  +  TYN LIN  CK  RV        
Sbjct: 477 VVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMD 536

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           +++     P+  T+ +++K    +  I  AA +   +   GCEP+++TY TLI GLC+ G
Sbjct: 537 QMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAG 596

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
              +A  L   +       G+V  P    Y+ +I  LCK     +A  LF +M ++   P
Sbjct: 597 RVDVASKLLRSVQMK----GMVLTPQA--YNPVIQALCKRKRTKEAMRLFREMMEKGDPP 650

Query: 241 DVVTYNSLIHGLCHAN-DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           DV+TY  +  GLC+      EA    +EM+++G+ P   +F  + + LC     D   +L
Sbjct: 651 DVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQL 710

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           +++++++G    + T  +++ GF  + K N A    G++
Sbjct: 711 INMVMEKGRFSQSET--SIIRGFLKIQKFNDALANLGAI 747


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 183/584 (31%), Positives = 298/584 (51%), Gaps = 51/584 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           REG+++     +A  +F  M++     P V +++  + +L K +  D       ++ + G
Sbjct: 239 REGEVS-----KACNLFHEMMQ-QGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
             P+  TYN +I+ +  +G+       F  + R    P+  T NS +  L    +  EAA
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------- 197
             F  + A G +P+++TY+ L++G    G+ +  LNLF  M  GNG              
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM-EGNGIVADHSVYNILIDA 411

Query: 198 ------------------EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                             E GV+  P+  TY T+I    + G +  A   F QM    + 
Sbjct: 412 YGKRGMMDEAMLIFTQMQERGVM--PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLK 469

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASR 298
           PD + YNSLI G C   +  +AK L  EMM +G+ +P+ V FN I++ LCK  ++ EA  
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + DL++  G RP+  T+N+L+DG+ L+GK+ +A  +  +M S+G + D V+Y+ L++GYC
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +N  +++ L L+REM+SKG+KPT +TY  +  GLF   +   A K+  EM   G   D  
Sbjct: 590 RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIS 649

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T    + GLC+N    EA+ LF+ L  +  + +I   N +ID + K  + + A ELF S+
Sbjct: 650 TCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI 709

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               LVPN  TY +MI  L  +G +++A ++F  ME++  AP     + +I   +   E 
Sbjct: 710 SATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEI 769

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLV---KNEISLKSLPS 579
           SK    L K+  K +  +AS  S+++ L     K    +KSLP+
Sbjct: 770 SKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPA 813



 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 188/664 (28%), Positives = 298/664 (44%), Gaps = 106/664 (15%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
            F S +  F   T R      ++  +   +FD +LR   +P P  + N  L +LA+    
Sbjct: 31  GFRSPIAAFATATERV-RAGTLSTEDTHHLFDELLR-QTTPVPERALNGFLTALARAPSS 88

Query: 84  DTRLN----ATGLF--------------PNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
            T  +    A  LF              P + TYNIL++C C+  R ++GF  FGR L++
Sbjct: 89  ATCRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKT 148

Query: 126 CFT------------------------------------PNAATFNSLIKGLHAESRIME 149
                                                  P+  ++++++K L  +SR   
Sbjct: 149 GLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQR 208

Query: 150 AAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           A  L   +  K+ GC PNV++YNT+I+G  R G    A NLF EM     + GVV  P+ 
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMM----QQGVV--PDV 262

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTYS+ ID LCK   +DKA+ +  QM      PD VTYN +IHG      W E   +F E
Sbjct: 263 VTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFRE 322

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  +G+ P + T N  M  LCK+ K  EA+   D M  +G +P+  TY+ L+ G+   G 
Sbjct: 323 MTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGY 382

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +     LF SME  G   D   YNILI+ Y K   ++EA+ ++ +M  +G+ P   TY T
Sbjct: 383 VVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGT 442

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG--------------------- 426
           +      + ++  A+  F++M   G+  DT  Y + I G                     
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502

Query: 427 ---------------LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
                          LCK G ++EA ++F  +  +    D+  +N LIDG    G+++ A
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA 562

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           + +  ++    + P+VVTY+ ++ G C +G++D    LF +M      P  IT+ +++HG
Sbjct: 563 FGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHG 622

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
                      ++ H+M E     D S   I++  L +N    +++  F       ++G 
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALF------KKLGA 676

Query: 592 SNVK 595
            NVK
Sbjct: 677 MNVK 680



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 48/298 (16%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNIL 102
           EA  IFD ++ +   P  V +FN L+        + K       + + G+ P++ TY+ L
Sbjct: 526 EAQDIFDLVIHIGERPD-VITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSAL 584

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM-------------- 148
           ++ +C+ GR+  G I F  +L     P   T+  ++ GL  + R +              
Sbjct: 585 LDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644

Query: 149 ---------------------EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
                                EA ALF KL A   + N+   NT+I+ + +      A  
Sbjct: 645 TMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANE 704

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           LF+ ++      G+V  PN  TY  +I  L KEG V++A  +F  M+     P     N+
Sbjct: 705 LFDSIS----ATGLV--PNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNN 758

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           +I  L    + ++A     ++  + +     T ++++    +  K  E  + L  M Q
Sbjct: 759 IIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQ 816


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 154/469 (32%), Positives = 256/469 (54%), Gaps = 12/469 (2%)

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C  G +         +  + F P+A T   +I  + A +  ++ A     L++ GC+PNV
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAM-ANAGDLDGA--MDHLRSMGCDPNV 57

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TY  LI    R      A+ L EEM          C PN VTY+ ++D LCK   V  A
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERG------CPPNLVTYNVLVDALCKLSMVGAA 111

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + +  +M +    P+V+T+NSL+ G C   + ++A++L   M+ +G++P+VVT++ ++D 
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 171

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LCK++K  EA  +L+ M   GV P+A TY+ L+ G C   KI  AE++   M   GC  D
Sbjct: 172 LCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V Y+ +I+ +CK+ ++ EA    +EM  +   P VVTYNT+  GL ++ ++  A  + D
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291

Query: 407 EMQRDG-VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           +MQ  G V  D  TY+T I+GLCK+  ++EA +L   +    C  D+  Y  +IDGLCK 
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           GRL+ A  L   +      PNVVTY  +I GLC   ++D+A  +  +M      P+++T+
Sbjct: 352 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 411

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKV--MPDASIVSIVVDLLVKNEI 572
           + +++G        +  +L+ +MK+ +    PDA+    +V+ L+ +++
Sbjct: 412 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDL 460



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 245/465 (52%), Gaps = 12/465 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G  P+ +T+  +I      G +     A   +      PN  T+ +LI       +
Sbjct: 16  MKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTALIAAFARAKK 72

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  L  +++  GC PN++TYN L++ LC+      A ++ ++M  G         PN
Sbjct: 73  LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG------FAPN 126

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T+++++DG CK G VD A+ L   M  + + P+VVTY++LI GLC +  + EAK +  
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM   GV P   T++ ++  LCK  K++EA ++L  M   G  P+   Y++++  FC  G
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTY 385
           K+  A++    M       D V+YN +I+G CK  ++ EA  +  +M   G + P VVTY
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           +T+  GL +   +  A KL D M + G   D  TYTT IDGLCK G + EA  L + ++ 
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  ++  Y  LI GLCK+ ++  A  +   + +    PN+VTYN M+ GLC  G++ +
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 426

Query: 506 ARDLFLDMEENAA--APDVITFDMLIHGFIRINEPSKVNELLHKM 548
           A+ L   M++  A  +PD  T+  +++  +  +   +  +LL +M
Sbjct: 427 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/455 (32%), Positives = 234/455 (51%), Gaps = 31/455 (6%)

Query: 12  SFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPN-------------EAFCIFDYML 58
           +F   PI    +N   L      L +   D NV+T               EA  + + M 
Sbjct: 25  AFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM- 83

Query: 59  RMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRV 112
           R    PP + ++N+L+ +L K       +    ++   G  PN+ T+N L++ FCK G V
Sbjct: 84  RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNV 143

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                  G ++     PN  T+++LI GL    + +EA  +  ++KA G  P+  TY+ L
Sbjct: 144 DDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSAL 203

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+GLC+      A  +   MA G+G     C P+ V YS+II   CK G + +A+    +
Sbjct: 204 IHGLCKADKIEEAEQMLRRMA-GSG-----CTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 257

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNR 291
           M+ +  +PDVVTYN++I GLC      EA+ +  +M + G V P VVT++ +++ LCK+ 
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            + EA +LLD M + G  P+  TY T++DG C  G++  AE L   M+  GC  + V+Y 
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+G CK ++V+EA  +  EM + G  P +VTYNT+  GL    +++ A +L   M +D
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM-KD 436

Query: 412 GVA---ADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           G A    D  TY T ++ L  +  + EA +L   +
Sbjct: 437 GRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL+L +EM+  G A D  T+T  I  +   G +  A++    LR + C+ ++  Y  LI 
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIA 65

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
              ++ +L+ A +L   +      PN+VTYN+++  LC    +  A+D+   M E   AP
Sbjct: 66  AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 125

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           +V+TF+ L+ GF +        +LL  M  K + P+    S ++D L K++  L++
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 181


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 169/554 (30%), Positives = 283/554 (51%), Gaps = 39/554 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++ +L K +  D       ++   G+ P+  TYN +I+ +   G        
Sbjct: 265 PDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKM 324

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++      P+  TF+S +  L    R  +A  +F  +   G  P++++Y+ L++G   
Sbjct: 325 FRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYAT 384

Query: 179 TGHTMIALNLFEEMAN---------------GNGEIGVV--------------CKPNTVT 209
            G      NLF  MA+                + + G++               +PN VT
Sbjct: 385 EGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YST+I   C+ G +  A   F QM    I P+   Y+SLIHG C   D  +AK    EMM
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM 504

Query: 270 DQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +G+ +P++V F+ I+  LC   ++ +A  + +L++  G RP   T+N+L+DG+CL+GK+
Sbjct: 505 SKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 564

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A  +  +M S+G + D V+ N L++GYCK+ ++++ L L+REM+ K +KPT VTYN +
Sbjct: 565 EKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIV 624

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL    +   A K+F EM   G A D  TY   + GLC+N    EA+ LF  L  + C
Sbjct: 625 LDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 684

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + DI   N +I+ L K  R + A +LF ++    LVPNV TY +MI+ L  +G +++A  
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADT 744

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +F  ME++  AP     + +I   ++  +  K    + K+    +  +AS  S+++ L  
Sbjct: 745 MFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFS 804

Query: 569 ---KNEISLKSLPS 579
              K+   +K LP+
Sbjct: 805 SKGKHREQIKFLPA 818



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 259/529 (48%), Gaps = 25/529 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLY---------- 97
           ++A  +FD +LR   +P    S N  LA+LA+     +  N   L   L+          
Sbjct: 59  DDAHHLFDELLR-QGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGP 117

Query: 98  --------TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
                   TY IL++C C+  R  LG     R+LR+          + +K L    R  E
Sbjct: 118 RVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDE 177

Query: 150 AA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           A   L  ++    C P+ I+YNT+I  LC    +  AL++ + MA   G     C P+ V
Sbjct: 178 AVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR----CSPDVV 233

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +++T+I G  K+G V KA  LF +M  + + PDV TYNS++  LC A   ++A+ +  +M
Sbjct: 234 SFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQM 293

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +D+GV+P  VT+N I+     +    E++++   M  +G+ P+  T+++ M   C  G+ 
Sbjct: 294 VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS 353

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             AEE+F  M + G   D VSY+IL++GY       +  +L+  M  KGI       N L
Sbjct: 354 KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINIL 413

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                +   ++ A+ +F EMQ  GV  +  TY+T I   C+ G + +A+E F  +  +  
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           E +   Y+ LI G C  G L  A E     +  G+  PN+V ++ +I  LC +G++  A+
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           D+F  +      P ++TF+ LI G+  + +  K   +L  M    + PD
Sbjct: 534 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 269/567 (47%), Gaps = 50/567 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF--------PNLYTYNILINCFCKIGRVSLGF 116
           P   S+N ++ SL  +      L+             P++ ++N +I+ F K G VS   
Sbjct: 193 PDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 252

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  +++    P+  T+NS++  L     + +A  +  ++   G EP+ +TYN +I+G 
Sbjct: 253 NLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY 312

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
             +GH   +  +F +M +     G++  P+TVT+S+ +  LCK G    A+ +F  M  +
Sbjct: 313 SCSGHWKESAKMFRKMTSK----GLI--PDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTK 366

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD+V+Y+ L+HG      + +   LF  M D+G+  +    N+++    K   MDEA
Sbjct: 367 GHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEA 426

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +   M  +GVRPN  TY+TL+  FC MG++  A E F  M S+G + +   Y+ LI+G
Sbjct: 427 MLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHG 486

Query: 357 YCKNKEVEEALSLYREMVSKGI------------------------------------KP 380
           +C + ++ +A     EM+SKG+                                    +P
Sbjct: 487 FCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRP 546

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           T+VT+N+L  G   + ++E A  + D M   G+  D  T  T + G CK+G I + + LF
Sbjct: 547 TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILF 606

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
           R +   K +     YN ++DGL ++GR   A ++F  +       ++ TY I+++GLC +
Sbjct: 607 REMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 666

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
              D+A  LF  +       D+   + +I+   ++    + N+L   +    ++P+ S  
Sbjct: 667 DLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTY 726

Query: 561 SIVVDLLVKNEISLKSLPSFLVQERQG 587
            +++  L+K     ++   F   E+ G
Sbjct: 727 GVMIRNLLKEGSVEEADTMFSSMEKSG 753



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 207/445 (46%), Gaps = 13/445 (2%)

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM-- 183
           C+ P  A   ++ +         +A  LF +L   G   +  + N  +  L R   ++  
Sbjct: 37  CWDPQVAFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSC 96

Query: 184 -----IALNLFEEMANGNGEIGVVCKPNTV-TYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                + L LF  +     E G    P TV TY  ++D  C+    D   A   ++    
Sbjct: 97  SNGPALVLALFNRICRE--EAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAG 154

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEA 296
           +    +   + +  LCHA   +EA  + +  M +    P  +++N ++  LC + +  EA
Sbjct: 155 LKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEA 214

Query: 297 SRLLDLMVQRGVR--PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
             ++  M + G R  P+  ++NT++ GF   G++++A  LF  M   G   D  +YN ++
Sbjct: 215 LDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIV 274

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +  CK + +++A  + R+MV KG++P  VTYN +  G       + + K+F +M   G+ 
Sbjct: 275 DALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLI 334

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            DT T+++F+  LCK+G   +A E+F+ +       DI +Y+ L+ G    GR      L
Sbjct: 335 PDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNL 394

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F S+    +V N    NI+I      G MD+A  +F +M+     P+V+T+  LI  F R
Sbjct: 395 FHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCR 454

Query: 535 INEPSKVNELLHKMKEKKVMPDASI 559
           +   +   E   +M    + P+ ++
Sbjct: 455 MGRLADAMEKFSQMISIGIEPNTAV 479



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 157/315 (49%), Gaps = 3/315 (0%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE-L 334
           +V T+ ++MD  C+ R+ D     +  +++ G++       T +   C   + + A + L
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK--PTVVTYNTLFLGL 392
              M  + C  D +SYN +I   C +   +EAL + + M  +G +  P VV++NT+  G 
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F+  +V  A  LF+EM + GV  D  TY + +D LCK   + +A  + R +     E D 
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN +I G   SG  K + ++F  +    L+P+ VT++  +  LC  G+   A ++F  
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQY 362

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M      PD++++ +L+HG+      + +N L H M +K ++ +   ++I++    K  +
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGM 422

Query: 573 SLKSLPSFLVQERQG 587
             +++  F   + QG
Sbjct: 423 MDEAMLVFTEMQGQG 437


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 257/494 (52%), Gaps = 14/494 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           +++ YN L+  +C+ G +       G +      P+A T+  LI+ L    R+ +A +L 
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTI 213
             +   GC+PNV+TY  L+  +C+      A+ + +EM A G       C PN VTY+ I
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG-------CTPNIVTYNVI 218

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I+G+C+EG VD A+ L  ++      PD V+Y +L+ GLC +  W++ + LF EMM++  
Sbjct: 219 INGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 278

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+ VTF++++   C+   ++ A ++L  M +     N    N +++  C  G+++ A +
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFK 338

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
              +M S GC  D +SY  ++ G C+ +   +A  L +EMV     P  VT+NT    L 
Sbjct: 339 FLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILC 398

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   +E A+ L ++MQ  G      TY   ++G C  G+I  A+ELFR++    C+ +  
Sbjct: 399 QKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTI 455

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  L+ GLC + RL  A EL   + H    PNVVT+N+++   C  G +D+A +L   M
Sbjct: 456 TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQM 515

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
            E+   P++IT++ L  G  +        ELLH +  K V PD    S ++ +L K +  
Sbjct: 516 MEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRV 575

Query: 574 LKSLPSFLVQERQG 587
            +++  F + +  G
Sbjct: 576 EEAIQMFHLAQDIG 589



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 253/512 (49%), Gaps = 16/512 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  + D MLR     P V ++ +LL ++ KN  ++        + A G  PN+ TYN++
Sbjct: 160 DALSLLDDMLR-RGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVI 218

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C+ GRV        R+      P+  ++ +L+KGL A  R  +   LF ++    C
Sbjct: 219 INGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNC 278

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T++ LI   CR G    A+ + ++M          C  NT   + +I+ +CK+G 
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE------CATNTTLCNIVINSICKQGR 332

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A      M     NPD ++Y +++ GLC A  WN+AK L  EM+     P+ VTFN 
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  LC+   +++A  L++ M + G      TYN L++GFC+ G I+ A ELF    SM 
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMP 449

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK + ++Y  L+ G C  + ++ A  L  EM+ +   P VVT+N L     +   ++ A+
Sbjct: 450 CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAI 509

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L ++M   G   +  TY T  DG+ K+    +A+EL   L       D+  ++ +I  L
Sbjct: 510 ELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL 569

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K  R++ A ++F       + P  + YN ++ GLC   ++D A D    M  N   P+ 
Sbjct: 570 SKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNE 629

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            T+ +LI G  R     +  +LL  +  + V+
Sbjct: 630 STYIILIEGLAREGLLKEAQDLLSMLCSRGVV 661



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 252/545 (46%), Gaps = 47/545 (8%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATG---LFPNLYTYNILINCFCKIGRVSLGFIAF 119
           SP  V ++N L+A   +  H D      G   + P+ YTY  LI   C  GRV+      
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +LR    PN  T+  L++ +   S   +A A+  +++A GC PN++TYN +ING+CR 
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 225

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A +L   +          C+P+TV+Y+T++ GLC     D  + LF +M ++N  
Sbjct: 226 GRVDDARDLLNRL------FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 279

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---------------------------- 271
           P+ VT++ LI   C       A ++  +M +                             
Sbjct: 280 PNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKF 339

Query: 272 -------GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
                  G  P  +++  ++  LC+  + ++A  LL  MV+    PN  T+NT +   C 
Sbjct: 340 LNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQ 399

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G I +A  L   M+  GC    V+YN L+NG+C    ++ AL L+R M     KP  +T
Sbjct: 400 KGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTIT 456

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  GL    +++ A +L  EM       +  T+   ++  C+ G++ EA+EL   + 
Sbjct: 457 YTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  YN L DG+ K    + A EL   L    + P+V+T++ +I  L  + +++
Sbjct: 517 EHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVE 576

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  +F   ++    P  + ++ ++ G  + +E     + L  M     MP+ S   I++
Sbjct: 577 EAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILI 636

Query: 565 DLLVK 569
           + L +
Sbjct: 637 EGLAR 641



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 212/431 (49%), Gaps = 16/431 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+  LL  L  +K +D        +      PN  T+++LI  FC+ G V      
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++       N    N +I  +  + R+ +A      + ++GC P+ I+Y T++ GLCR
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  L +EM   N      C PN VT++T I  LC++G +++A  L  QM++   
Sbjct: 365 AERWNDAKELLKEMVRNN------CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGC 418

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              VVTYN+L++G C     + A  LF  M     +P+ +T+  ++  LC   ++D A+ 
Sbjct: 419 TVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAE 475

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+  M+ R   PN  T+N L++ FC  G ++ A EL   M   GC  + ++YN L +G  
Sbjct: 476 LVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGIT 535

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+   E+AL L   +VSKG+ P V+T++++   L +  +VE A+++F   Q  G+     
Sbjct: 536 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKAL 595

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   + GLCK   I  A++    +    C  +   Y  LI+GL + G LK A +L   L
Sbjct: 596 VYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSML 655

Query: 479 -PHGVLVPNVV 488
              GV+  N++
Sbjct: 656 CSRGVVSKNLI 666



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 205/425 (48%), Gaps = 16/425 (3%)

Query: 129 PNAATFNSLI--KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           P +A    LI  + L   +R++E +A        G  P+V     LI  LCR G T  A 
Sbjct: 41  PASARLRRLIAREDLAGAARLVELSA-----SRDGEAPDVYLCTKLIRNLCRRGRTSDAA 95

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +    A G+G        +   Y+T++ G C+ G +D A+ L   M    + PD  TY 
Sbjct: 96  RVLRA-AEGSGS-----PVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYT 146

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI  LC      +A  L  +M+ +G QP+VVT+ V+++ +CKN   ++A  +LD M  +
Sbjct: 147 PLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAK 206

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  PN  TYN +++G C  G+++ A +L   + S GC+ D VSY  L+ G C +K  ++ 
Sbjct: 207 GCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDV 266

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L+ EM+ K   P  VT++ L         VE A+++  +M     A +T      I+ 
Sbjct: 267 EELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINS 326

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           +CK G + +A +    +    C  D  +Y  ++ GLC++ R   A EL   +      PN
Sbjct: 327 ICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPN 386

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            VT+N  I  LC  G +++A  L   M+E+     V+T++ L++GF          EL  
Sbjct: 387 EVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFR 446

Query: 547 KMKEK 551
            M  K
Sbjct: 447 SMPCK 451



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 6/347 (1%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF-IEMMDQGVQPSVVTFNVIM 284
           A A   + +  N+ P+  +  + +  L    D   A RL  +     G  P V     ++
Sbjct: 25  AAAAATRPESPNVAPNPAS--ARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLI 82

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
             LC+  +  +A+R+L      G   +   YNTL+ G+C  G ++ A  L GSM      
Sbjct: 83  RNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV---A 139

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D  +Y  LI   C    V +ALSL  +M+ +G +P VVTY  L   + +    E A+ +
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            DEM+  G   +  TY   I+G+C+ G + +A +L   L    C+ D  +Y  L+ GLC 
Sbjct: 200 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCA 259

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           S R     ELF  +     +PN VT++++I+  C  G +++A  +   M E+  A +   
Sbjct: 260 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTL 319

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +++I+   +        + L+ M      PD    + V+  L + E
Sbjct: 320 CNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 152/500 (30%), Positives = 263/500 (52%), Gaps = 16/500 (3%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIM 148
           +G   +++ YN L+  +C+ G++     A  R++ S    P+A T+  +I+GL    R+ 
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLD----AARRLIASMPVAPDAYTYTPIIRGLCDRGRVG 162

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
           EA +L   +   GC+P+V+TY  L+  +C++     A+ + +EM A G       C PN 
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-------CTPNI 215

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+ II+G+C+EG VD A+    ++      PD V+Y +++ GLC A  W + + LF E
Sbjct: 216 VTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 275

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           MM++   P+ VTF++++   C+   ++ A ++L+ M   G   N    N +++  C  G+
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A +   +M S GC  D +SY  ++ G C+ +  E+A  L +EMV K   P  VT+NT
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
               L +   +E A  L ++M   G   +  TY   ++G C  G +  A+ELF ++    
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---P 452

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ +   Y  L+ GLC + RL  A EL   +      PNVVT+N+++   C  G MD+A 
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +L   M E+   P++IT++ L+ G  +     +  ELLH +    V PD    S ++ +L
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572

Query: 568 VKNEISLKSLPSFLVQERQG 587
            + +   +++  F + +  G
Sbjct: 573 SREDRVEEAIKMFHIVQDLG 592



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 156/512 (30%), Positives = 260/512 (50%), Gaps = 16/512 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  + D ML      P V ++ +LL ++ K+  +         + A G  PN+ TYN++
Sbjct: 163 EALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C+ GRV        R+    F P+  ++ +++KGL A  R  +   LF ++    C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T++ L+   CR G    A+ + E+M+ G+G     C  NT   + +I+ +CK+G 
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGR 335

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A      M     +PD ++Y +++ GLC A  W +AK L  EM+ +   P+ VTFN 
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  LC+   +++A+ L++ M + G   N  TYN L++GFC+ G+++ A ELF    SM 
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMP 452

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK + ++Y  L+ G C  + ++ A  L  EM+ K   P VVT+N L     +   ++ A+
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L ++M   G   +  TY T +DG+ K+    EA+EL   L       DI  Y+ +I  L
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            +  R++ A ++F  +    + P  V YN ++  LC     D A D F  M  N   P+ 
Sbjct: 573 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNE 632

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +T+  LI G    +   +  +LL ++  + V+
Sbjct: 633 LTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 248/519 (47%), Gaps = 21/519 (4%)

Query: 61  HPSPPPVSSFN---------ILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
            P  P  SS N         I    LA+      R  + G  P++Y    LI   C+ GR
Sbjct: 34  RPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGR 93

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            S          RS    +   +N+L+ G     ++  A  L   +      P+  TY  
Sbjct: 94  TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTP 150

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I GLC  G    AL+L ++M +        C+P+ VTY+ +++ +CK     +A  +  
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRG------CQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M+ +   P++VTYN +I+G+C     ++A+     +   G QP  V++  ++  LC  +
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           + ++   L   M+++   PN  T++ L+  FC  G + RA ++   M   GC  +    N
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           I+IN  CK   V++A      M S G  P  ++Y T+  GL    + E A +L  EM R 
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
               +  T+ TFI  LC+ G I +A  L   +    CE++I  YN L++G C  GR+  A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ELF S+P     PN +TY  ++ GLCN  ++D A +L  +M +   AP+V+TF++L+  
Sbjct: 445 LELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           F +     +  EL+ +M E    P+    + ++D + K+
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 540


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 173/554 (31%), Positives = 280/554 (50%), Gaps = 39/554 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++ +L K +  D       ++    + P+  TY  +I+ +  +GR       
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + R    P+  TFNSL+  L    R  EAA +F  +   G +P++I+Y+ L++G   
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424

Query: 179 TGHTMIALNLFEEMA---------------NGNGEIGVV--------------CKPNTVT 209
            G  +   NLF  M                N + + G++                PN VT
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T+I  LC+ G +  A     QM    + P+ V Y+SLI G C   D  +AK L  EMM
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 270 DQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           DQG+ +P++  F+ I+  LC   ++  A  + +L++  G RP+  T+N+L+DG+CL+GK+
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           ++A  +  +M S G + D V+Y+ LINGY K+  +++ L L+REM+ K +KPT VTY+ +
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLV 664

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GLF   +   A K+F EM   G A    TYT  + GLC+N    EA+ LF  L  +  
Sbjct: 665 LDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNL 724

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + +I   N +I  L K  R + A +LF S+    LVPN  TY +MI  L  +G +++A  
Sbjct: 725 KFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADI 784

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +F  ME+   AP     + +I   ++  E  K    + K+    +  +AS  S+++ L  
Sbjct: 785 MFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFA 844

Query: 569 ---KNEISLKSLPS 579
              +    +K LP+
Sbjct: 845 SKGRYREQIKFLPA 858



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 181/626 (28%), Positives = 295/626 (47%), Gaps = 98/626 (15%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY----DTRLNATGLFPNL----- 96
           +  +A  +FD +LR   +P    + N  LA+LA+ +      D    A  LF  +     
Sbjct: 98  STEDAHHLFDELLR-QDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEA 156

Query: 97  ---------YTYNILINCFCKIGRVSLGFIAFGRILRS----------------CFT--- 128
                    +TY IL++C C+  R  LG   F R+LR+                C+    
Sbjct: 157 GPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRT 216

Query: 129 -----------------PNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYN 170
                            P+A ++N++IK L   SR  EA  +  ++ K  GC P+V++Y 
Sbjct: 217 DEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYT 276

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            +I+GL   G    A NLF EM     + GVV  PN VTY++I+  LCK   +DKA+ + 
Sbjct: 277 MVIHGLFMEGEISKACNLFNEMV----QKGVV--PNVVTYNSIVHALCKARAMDKAELVL 330

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            QM D +I PD VTY ++IHG      W EA ++F EM  +G+ P +VTFN +MD LCK+
Sbjct: 331 RQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKH 390

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
           ++  EA+ +   +  +G +P+  +Y+ L+ G+   G+      LF SM   G   D   +
Sbjct: 391 KRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCF 450

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           NILIN + K   ++EAL ++ EM  +G+ P VVTY T+   L  + ++  A++   +M  
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL------------------------RIL 446
            G+  +T  Y + I G C +G +I+A EL   +                        R++
Sbjct: 511 IGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVM 570

Query: 447 KCE------------LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
             +             DI  +N LIDG C  G++  A+ +  ++      P+VVTY+ +I
Sbjct: 571 NAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI 630

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            G    G++D    LF +M      P  +T+ +++ G  R    S   ++ H+M E    
Sbjct: 631 NGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTA 690

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSF 580
              S  +I++  L +N  + +++  F
Sbjct: 691 MSISTYTIILQGLCRNNCTDEAITLF 716



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 2/317 (0%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA- 331
           V  +V T+ ++MD  C+ R+ D        +++ G+R +    NT +   C   + + A 
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEAL 220

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTVVTYNTLFL 390
             L   M  +GC  D  SYN +I   C     +EAL +   M    G  P VV+Y  +  
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GLF   ++  A  LF+EM + GV  +  TY + +  LCK   + +A  + R +     + 
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  +I G    GR K A ++F  +    L+P++VT+N ++  LC   +  +A ++F
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +      PD+I++ +L+HG+        +N L H M +  ++ D+   +I+++   K 
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKR 460

Query: 571 EISLKSLPSFLVQERQG 587
            +  ++L  F     QG
Sbjct: 461 GMMDEALLIFTEMRGQG 477


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 167/520 (32%), Positives = 268/520 (51%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S+N++L  L        A N  YD  + + G+ P +YT
Sbjct: 150 PGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYD--MLSRGVSPTVYT 207

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + +++   C +  V         + +    PN+  + +LI  L   +R+ EA  L   + 
Sbjct: 208 FGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMF 267

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
              CEP+V T+N +I+GLCR G    A  L + M             + +TY  ++ GLC
Sbjct: 268 LMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFST------DALTYGYLMHGLC 321

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL-FIEMMDQGVQPSV 277
           + G VD+A+AL  ++     NP+ V YN+LI G   +  + EAK L +  M+  G +P  
Sbjct: 322 RMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDA 377

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            TFN+++D L K   +  A  LL+ MV +   PN  TY  L++GFC  G++  A E+  S
Sbjct: 378 YTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNS 437

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G   + V YN LI   CK+  +EEAL L+ EM  KG KP + T+N+L  GL + H+
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E AL L+ +M  +GV A+T TY T +        I +A +L   +    C LD   YN 
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNG 557

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LCK+G ++    LF  +    + P +++ NI+I GLC  G+++ A     DM    
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
             PD++T++ LI+G  ++    + + L +K++ + + PDA
Sbjct: 618 LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDA 657



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 176/538 (32%), Positives = 266/538 (49%), Gaps = 22/538 (4%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGL 92
           +GD   + PN    +F  ML    SP  V +F +++ +L      D+       +   G 
Sbjct: 182 DGDCPRVAPN----VFYDMLSRGVSPT-VYTFGVVMKALCMVSEVDSACSLLRDMAKHGC 236

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PN   Y  LI+  C+  RVS        +   C  P+  TFN +I GL    RI EAA 
Sbjct: 237 VPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAK 296

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G   + +TY  L++GLCR G    A  L  ++ N          PNTV Y+T
Sbjct: 297 LLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----------PNTVLYNT 346

Query: 213 IIDGLCKEGFVDKAK-ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           +I G    G  ++AK  L+  M      PD  T+N +I GL        A  L  EM+ +
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
             +P+V+T+ ++++  CK  +++EA+ +++ M  +G+  N   YN L+   C  G I  A
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +LFG M   GCK D  ++N LING CKN ++EEALSLY +M  +G+    VTYNTL   
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
                 ++ A KL DEM   G   D  TY   I  LCK G + + + LF  +        
Sbjct: 527 FLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPT 586

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I + N LI GLC++G++  A +    + H  L P++VTYN +I GLC  G + +A +LF 
Sbjct: 587 IISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFN 646

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++     PD IT++ LI         +    LL+K  +   +P+    SI+++ +VK
Sbjct: 647 KLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 170/355 (47%), Gaps = 6/355 (1%)

Query: 219 KEGFVDKAKALFLQMKD-ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           K G   +A  L L M    + +P   +YN ++  L   +    A  +F +M+ +GV P+V
Sbjct: 146 KAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTV 205

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            TF V+M  LC   ++D A  LL  M + G  PN+  Y TL+   C   +++ A +L   
Sbjct: 206 YTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLED 265

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M  M C+ D  ++N +I+G C+   + EA  L   M+ +G     +TY  L  GL  + Q
Sbjct: 266 MFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ 325

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL-FRTLRILKCELDIQAYN 456
           V+ A  L +++       +T  Y T I G   +G   EA +L +  + I   E D   +N
Sbjct: 326 VDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +IDGL K G L  A EL   +      PNV+TY I+I G C  G++++A ++   M   
Sbjct: 382 IMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             + + + ++ LI    +     +  +L  +M  K   PD    + +++ L KN 
Sbjct: 442 GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNH 496



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 148/341 (43%), Gaps = 41/341 (12%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGV---------------------------------- 273
           LI  L    D+   ++L  +M D+G+                                  
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 274 --QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
              P+  ++NV++D L        A  +   M+ RGV P   T+  +M   C++ +++ A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M   GC  + V Y  LI+  C+N  V EAL L  +M     +P V T+N +  G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    ++  A KL D M   G + D  TY   + GLC+ G + EA  L   +       +
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPN 340

Query: 452 IQAYNCLIDGLCKSGRLKFAWE-LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
              YN LI G   SGR + A + L+ ++      P+  T+NIMI GL   G +  A +L 
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +M      P+VIT+ +LI+GF +     +  E+++ M  K
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 6/161 (3%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TYN LI   CK G V  G   F  +L     P   + N LI GL    ++ +A      +
Sbjct: 554 TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM 613

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+++TYN+LINGLC+ GH   A NLF ++ +         +P+ +TY+T+I   
Sbjct: 614 IHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG------IRPDAITYNTLISRH 667

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
           C EG  + A  L  +  D    P+ VT++ LI+ +     W
Sbjct: 668 CHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPW 708


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 254/480 (52%), Gaps = 48/480 (10%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           N+A  +F  M+   P P  +  F  LL+ +AK   YD       ++   G+ P L T NI
Sbjct: 65  NDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++C C                                     S+   A+    K+   G
Sbjct: 124 VMHCVC-----------------------------------LSSQPCRASCFLGKMMKLG 148

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+++T+ +L+NG C       A+ LF+++      +G+  KPN VTY+T+I  LCK  
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQI------LGMGFKPNVVTYTTLIRCLCKNR 202

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A  LF QM      P+VVTYN+L+ GLC    W +A  L  +MM + ++P+V+TF 
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K  K+ EA  L ++M+Q  V P+  TY +L++G C+ G ++ A ++F  ME  
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  ++V Y  LI+G+CK+K VE+ + ++ EM  KG+    +TY  L  G   + + + A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++F++M       D RTY   +DGLC NG + +A+ +F  +R  + +++I  Y  +I G
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +CK G+++ A++LFCSL    + PNV+TY  MI G C  G + +A  LF  M+E+   P+
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/441 (32%), Positives = 231/441 (52%), Gaps = 6/441 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R++ S   P+   F  L+  +   +R     +LF +++  G  P + T N +++ +C 
Sbjct: 71  FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCL 130

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +     A     +M     E      P+ VT++++++G C    ++ A ALF Q+     
Sbjct: 131 SSQPCRASCFLGKMMKLGFE------PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTY +LI  LC     N A  LF +M   G +P+VVT+N ++  LC+  +  +A+ 
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M++R + PN  T+  L+D F  +GK+  A+EL+  M  M    D  +Y  LING C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
               ++EA  ++  M   G  P  V Y TL  G  +  +VE  +K+F EM + GV A+T 
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I G C  G    A E+F  +   +   DI+ YN L+DGLC +G+++ A  +F  +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  N+VTY I+IQG+C  G+++ A DLF  +      P+VIT+  +I GF R    
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484

Query: 539 SKVNELLHKMKEKKVMPDASI 559
            + + L  KMKE   +P+ S+
Sbjct: 485 HEADSLFKKMKEDGFLPNESV 505



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 2/373 (0%)

Query: 209 TYSTII-DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           +Y  I+ +GL    F D A  LF +M      P ++ +  L+  +   N ++    LF +
Sbjct: 50  SYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G+ P + T N++M  +C + +   AS  L  M++ G  P+  T+ +L++G+C   +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I  A  LF  +  MG K + V+Y  LI   CKN+ +  A+ L+ +M + G +P VVTYN 
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL EI +   A  L  +M +  +  +  T+T  ID   K G ++EA EL+  +  + 
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D+  Y  LI+GLC  G L  A ++F  +      PN V Y  +I G C   +++   
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +F +M +     + IT+ +LI G+  +  P    E+ ++M  ++  PD    ++++D L
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 568 VKNEISLKSLPSF 580
             N    K+L  F
Sbjct: 409 CCNGKVEKALMIF 421



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 217/445 (48%), Gaps = 23/445 (5%)

Query: 131 AATFNSLIKGLHAESRIME--------AAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           A  F S++KG H  S            AA+L      F           L NGL    H 
Sbjct: 6   ATGFASIVKGFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGL----HN 61

Query: 183 MI---ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           +    AL+LF  M +          P+ + ++ ++  + K    D   +LF QM+   I 
Sbjct: 62  LQFNDALDLFTRMVHSRP------LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P + T N ++H +C ++    A     +MM  G +P +VTF  +++  C   ++++A  L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            D ++  G +PN  TY TL+   C    +N A ELF  M + G + + V+YN L+ G C+
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
                +A  L R+M+ + I+P V+T+  L     ++ ++  A +L++ M +  V  D  T
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y + I+GLC  G + EA ++F  +    C  +   Y  LI G CKS R++   ++F  + 
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              +V N +TY ++IQG C  G+ D A+++F  M    A PD+ T+++L+ G     +  
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415

Query: 540 KVNELLHKMKEKKVMPDASIVSIVV 564
           K   +   M+++++  D +IV+  +
Sbjct: 416 KALMIFEYMRKREM--DINIVTYTI 438



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 120/261 (45%)

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + N A +LF  M         + +  L++   K    +  +SL+ +M   GI P + T N
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +   +    Q   A     +M + G   D  T+T+ ++G C    I +A+ LF  +  +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + ++  Y  LI  LCK+  L  A ELF  +      PNVVTYN ++ GLC  G+   A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  DM +    P+VITF  LI  F+++ +  +  EL + M +  V PD      +++ 
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 567 LVKNEISLKSLPSFLVQERQG 587
           L    +  ++   F + ER G
Sbjct: 303 LCMYGLLDEARQMFYLMERNG 323


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 165/475 (34%), Positives = 254/475 (53%), Gaps = 14/475 (2%)

Query: 100 NILINCFCKIGRVSLGFIAFGRIL---RSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           NI++   C+ G V   F A G I    R   +P+  ++N+LI GL    ++ EA  L  +
Sbjct: 2   NIVLKGLCRNGGV---FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLE 58

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++A GC PN +T  TL++GLC+ G    A+ L E M     +       + V Y T+I G
Sbjct: 59  MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD------ADVVLYGTLISG 112

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
            C  G +D+ K LF +M  + I+ +VVTY+ L+HGLC    W EA  +   M + G+ P 
Sbjct: 113 FCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 172

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VVT+  ++D LCK+ +   A  LL+LMV++G  P+  TYN L+ G C  G +  A ++  
Sbjct: 173 VVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 232

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFE 394
            M   G K D V+YN L+ G C   +V+EAL L+  M      ++P V T+N L  GL +
Sbjct: 233 MMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK 292

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++  A+K+  +M + G   +  TY   + G  K G I EA+EL++ +  L    +   
Sbjct: 293 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 352

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y+ LIDG CK   L  A  LFC +    L P +  YN ++  LC +G +++A+ LF +M 
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                PD+I+F+ +I G ++  +   V EL  KM E  + PDA   S +++ L K
Sbjct: 413 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 467



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 177/571 (30%), Positives = 287/571 (50%), Gaps = 66/571 (11%)

Query: 70  FNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLGFIAFG 120
            NI+L  L +N        A GL          P++ +YN LIN  CK  ++     A G
Sbjct: 1   MNIVLKGLCRNGGV---FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK---EAVG 54

Query: 121 RILR----SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
            +L      CF PN+ T  +L+ GL  + R+ EA  L   +K  G + +V+ Y TLI+G 
Sbjct: 55  LLLEMEAAGCF-PNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGF 113

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C  G+      LF+EM      +G     N VTYS ++ GLC+ G   +A  +   M + 
Sbjct: 114 CNNGNLDRGKELFDEM------LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEH 167

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I+PDVVTY  LI GLC       A  L   M+++G +PS VT+NV++  LCK   + +A
Sbjct: 168 GIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDA 227

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDV-SYNILI 354
            ++L +M+++G + +  TYNTLM G C  GK++ A +LF SM ++  C   +V ++N+LI
Sbjct: 228 FKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLI 287

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G CK   + +A+ ++R+MV KG    +VTYN L  G  +  +++ A++L+ ++   G  
Sbjct: 288 GGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFV 347

Query: 415 ADTRTYTTFIDG-----------------------------------LCKNGYIIEAVEL 439
            ++ TY+  IDG                                   LCK G + +A  L
Sbjct: 348 PNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSL 407

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F+ +    CE DI ++N +IDG  K+G  +F  EL   +    L P+ +T++ +I  L  
Sbjct: 408 FQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 467

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++D+A+     M  +   PD + +D L+ G     + +++  LLH+M  K  + D  I
Sbjct: 468 LGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKI 527

Query: 560 VSIVVDLL---VKNEISLKSLPSFLVQERQG 587
           VS ++  L   ++    ++ LP+F     +G
Sbjct: 528 VSTILTCLCHSIQEVDVMELLPTFFQGTSEG 558



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 178/367 (48%), Gaps = 24/367 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL--------NATGLFPNLYTYN 100
           +AF I   M+        V ++N L+  L      D  L        N   L PN++T+N
Sbjct: 226 DAFKILRMMIE-KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 284

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +LI   CK GR++       ++++     N  T+N L+ G     +I EA  L+ ++   
Sbjct: 285 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 344

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  PN  TY+ LI+G C+     IA  LF EM            P    Y+T++  LCKE
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG------LNPALFDYNTLMASLCKE 398

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++AK+LF +M + N  PD++++N++I G   A D+   K L ++M++ G++P  +TF
Sbjct: 399 GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTF 458

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + +++ L K  ++DEA   L+ MV  G  P+A  Y++L+ G    G       L   M +
Sbjct: 459 STLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAA 518

Query: 341 MGCKHDDVSYNILINGYC---KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            G   D    + ++   C   +  +V E L  + +  S+G     ++ N L   L ++HQ
Sbjct: 519 KGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGAS---ISCNEL---LMQLHQ 572

Query: 398 VEHALKL 404
               L+L
Sbjct: 573 SHPKLQL 579



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 127/238 (53%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           NI++ G C+N  V EA+ L REM  K + P +V+YNTL  GL +  +++ A+ L  EM+ 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   ++ T TT +DGLCK+G + EA+EL   ++    + D+  Y  LI G C +G L  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
             ELF  +    +  NVVTY+ ++ GLC  GQ  +A  +   M E+   PDV+T+  LI 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
           G  +    +   +LL+ M EK   P     ++++  L K  + + +     +   +G+
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 152/500 (30%), Positives = 263/500 (52%), Gaps = 16/500 (3%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIM 148
           +G   +++ YN L+  +C+ G++     A  R++ S    P+A T+  +I+GL    R+ 
Sbjct: 138 SGTAVDVFAYNTLVAGYCRYGQLD----AARRLIASMPVAPDAYTYTPIIRGLCDRGRVG 193

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
           EA +L   +   GC+P+V+TY  L+  +C++     A+ + +EM A G       C PN 
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-------CTPNI 246

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+ II+G+C+EG VD A+    ++      PD V+Y +++ GLC A  W + + LF E
Sbjct: 247 VTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 306

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           MM++   P+ VTF++++   C+   ++ A ++L+ M   G   N    N +++  C  G+
Sbjct: 307 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 366

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A +   +M S GC  D +SY  ++ G C+ +  E+A  L +EMV K   P  VT+NT
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
               L +   +E A  L ++M   G   +  TY   ++G C  G +  A+ELF ++    
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---P 483

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ +   Y  L+ GLC + RL  A EL   +      PNVVT+N+++   C  G MD+A 
Sbjct: 484 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 543

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +L   M E+   P++IT++ L+ G  +     +  ELLH +    V PD    S ++ +L
Sbjct: 544 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 603

Query: 568 VKNEISLKSLPSFLVQERQG 587
            + +   +++  F + +  G
Sbjct: 604 SREDRVEEAIKMFHIVQDLG 623



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/512 (30%), Positives = 260/512 (50%), Gaps = 16/512 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  + D ML      P V ++ +LL ++ K+  +         + A G  PN+ TYN++
Sbjct: 194 EALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C+ GRV        R+    F P+  ++ +++KGL A  R  +   LF ++    C
Sbjct: 253 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 312

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T++ L+   CR G    A+ + E+M+ G+G     C  NT   + +I+ +CK+G 
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGR 366

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A      M     +PD ++Y +++ GLC A  W +AK L  EM+ +   P+ VTFN 
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  LC+   +++A+ L++ M + G   N  TYN L++GFC+ G+++ A ELF SM    
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP--- 483

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK + ++Y  L+ G C  + ++ A  L  EM+ K   P VVT+N L     +   ++ A+
Sbjct: 484 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 543

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L ++M   G   +  TY T +DG+ K+    EA+EL   L       DI  Y+ +I  L
Sbjct: 544 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 603

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            +  R++ A ++F  +    + P  V YN ++  LC     D A D F  M  N   P+ 
Sbjct: 604 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNE 663

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +T+  LI G    +   +  +LL ++  + V+
Sbjct: 664 LTYITLIEGLANEDFLKETRDLLRELCSRGVL 695



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 239/485 (49%), Gaps = 12/485 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R  + G  P++Y    LI   C+ GR S          RS    +   +N+L+ G     
Sbjct: 99  RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYG 158

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++  A  L   +      P+  TY  +I GLC  G    AL+L ++M +        C+P
Sbjct: 159 QLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG------CQP 209

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +++ +CK     +A  +  +M+ +   P++VTYN +I+G+C     ++A+   
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             +   G QP  V++  ++  LC  ++ ++   L   M+++   PN  T++ L+  FC  
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G + RA ++   M   GC  +    NI+IN  CK   V++A      M S G  P  ++Y
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            T+  GL    + E A +L  EM R     +  T+ TFI  LC+ G I +A  L   +  
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             CE++I  YN L++G C  GR+  A ELF S+P     PN +TY  ++ GLCN  ++D 
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDA 506

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A +L  +M +   AP+V+TF++L+  F +     +  EL+ +M E    P+    + ++D
Sbjct: 507 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 566

Query: 566 LLVKN 570
            + K+
Sbjct: 567 GITKD 571



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 195/402 (48%), Gaps = 9/402 (2%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           AA L  +  + G  P+V     LI  LCR G T  A  +          + V        
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF------A 146

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ G C+ G +D A+ L   M    + PD  TY  +I GLC      EA  L  +M+
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G QPSVVT+ V+++ +CK+    +A  +LD M  +G  PN  TYN +++G C  G+++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A E    + S G + D VSY  ++ G C  K  E+   L+ EM+ K   P  VT++ L 
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                   VE A+++ ++M   G AA+T      I+ +CK G + +A +    +    C 
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D  +Y  ++ GLC++ R + A EL   +      PN VT+N  I  LC  G +++A  L
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 443

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
              M E+    +++T++ L++GF          EL + M  K
Sbjct: 444 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 485



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 38/331 (11%)

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A RL      +G  P V     ++  LC+  +  +A+R+L    + G   +   YNTL+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+C  G+++ A  L  SM       D  +Y  +I G C    V EALSL  +M+ +G +P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           +VVTY  L   + +      A+++ DEM+  G   +  TY   I+G+C+ G + +A E  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY---------- 490
             L     + D  +Y  ++ GLC + R +   ELF  +     +PN VT+          
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 491 -------------------------NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
                                    NI+I  +C  G++D A     +M     +PD I++
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             ++ G  R        ELL +M  K   P+
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPN 420



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 106/240 (44%), Gaps = 7/240 (2%)

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  L     S G   D      LI   C+     +A  + R     G    V  YNTL 
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G     Q++ A +L   M    VA D  TYT  I GLC  G + EA+ L   +    C+
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  Y  L++ +CKS     A E+   +      PN+VTYN++I G+C +G++D AR+ 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              +      PD +++  ++ G         V EL  +M EK  MP+     +  D+LV+
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN----EVTFDMLVR 324


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 160/460 (34%), Positives = 246/460 (53%), Gaps = 7/460 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +  +L+N FCK GRV         +    F+P+  TFNSL+ G      + +A  +   +
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G +P+V TYN+LI+G+C+ G    A+ + ++M      I   C PNTVTY+T+I  L
Sbjct: 290 IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM------ILRECSPNTVTYNTLISAL 343

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CKE  ++ A  L   +  + + PDV T+N+LI GLC + + + A  +F EM ++G +P  
Sbjct: 344 CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+++++D LC  R++ EA  LL  M   G   NA  YNTL+DG C   +I  AEE+F  
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME +G     V+YN LI+G CKNK VEEA  L  +M+ +G+KP   TYN+L      +  
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  +   M  +G   D  TY T I GLC+ G +  A +L R++++    L   AYN 
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNP 583

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN-DGQMDKARDLFLDMEEN 516
           +I  L    R K    LF  +      P+ +T+ I+ +GLCN  G + +A D  ++M E 
Sbjct: 584 VIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEK 643

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
              P+  +F  L  G   ++    + EL++ + EK  M +
Sbjct: 644 GILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE 683



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 263/505 (52%), Gaps = 12/505 (2%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  + +NI L +L ++          +++   G+  ++ T+N+LI   CK  ++    + 
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  TF +L++G   E  +  A  +  ++  +GC    ++   L+NG C+
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL    E++    E G    P+ VT++++++G C+ G V+ A  +   M ++  
Sbjct: 241 EGRVEEALRFVLEVS----EEGF--SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 294

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PDV TYNSLI G+C   ++ +A  +  +M+ +   P+ VT+N ++  LCK  +++ A+ 
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD 354

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L  ++V +G+ P+ CT+NTL+ G CL    + A E+F  M++ GCK D+ +Y+ILI+  C
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             + ++EAL L +EM S G     V YNTL  GL +  ++E A ++FD+M+  GV+  + 
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T IDGLCKN  + EA +L   + +   + D   YN L+   C+ G ++ A ++  ++
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P++ TY  +I GLC  G++D A  L   ++          ++ +I         
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594

Query: 539 SKVNELLHKMKEKKVMPDASIVSIV 563
            +   L  +M EK   PDA    IV
Sbjct: 595 KEGMRLFREMMEKSDPPDALTHKIV 619



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 253/501 (50%), Gaps = 10/501 (1%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRL----NATGLFPNLYTYNILINCFCKIGRVS 113
           L+   S P  ++F  L+ S       +  L    N  G  P+   YNI +N   +  ++ 
Sbjct: 81  LKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLK 140

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
           L  +   +++      + +TFN LIK L    ++  A  +  ++   G +P+ IT+ TL+
Sbjct: 141 LVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLM 200

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
            G    G    AL + ++M      +G  C    V+   +++G CKEG V++A    L++
Sbjct: 201 QGFIEEGDLNGALKMKKQM------LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV 254

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
            +E  +PD VT+NSL++G C   + N+A  +   M+++G  P V T+N ++  +CK  + 
Sbjct: 255 SEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           ++A  +L  M+ R   PN  TYNTL+   C   +I  A +L   + S G   D  ++N L
Sbjct: 315 EKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTL 374

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I G C +K  + A+ ++ EM +KG KP   TY+ L   L    +++ AL L  EM+  G 
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           A +   Y T IDGLCK+  I +A E+F  + +L        YN LIDGLCK+ R++ A +
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   +    L P+  TYN ++   C  G ++KA D+   M  N   PD+ T+  LI G  
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554

Query: 534 RINEPSKVNELLHKMKEKKVM 554
           R       ++LL  ++ K ++
Sbjct: 555 RAGRVDVASKLLRSVQMKGIV 575



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 183/366 (50%), Gaps = 2/366 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN  T++T+I       F +    L +   +    PD   YN  ++ L   N     + L
Sbjct: 88  PNATTFATLIQSFT--NFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEML 145

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M+++G+   V TFNV++  LCK  ++  A  +L+ M   G++P+  T+ TLM GF  
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G +N A ++   M   GC   +VS  +L+NG+CK   VEEAL    E+  +G  P  VT
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +N+L  G   I  V  AL + D M   G   D  TY + I G+CK G   +A+E+ + + 
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           + +C  +   YN LI  LCK   ++ A +L   L    L+P+V T+N +IQGLC     D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A ++F +M+     PD  T+ +LI          +   LL +M+      +A + + ++
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 565 DLLVKN 570
           D L K+
Sbjct: 446 DGLCKS 451



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 213/452 (47%), Gaps = 14/452 (3%)

Query: 126 CFTPNAATFN------SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           C TP++ T +      +L+  L   S       L  +LK+ G  PN  T+ TLI      
Sbjct: 44  CTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNF 103

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                 L + E       E+G   KP+T  Y+  ++ L ++  +   + L  +M +E I 
Sbjct: 104 HEIENLLKILE------NELGF--KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIV 155

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
            DV T+N LI  LC A+    A  +  EM + G++P  +TF  +M    +   ++ A ++
Sbjct: 156 LDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKM 215

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              M+  G      +   L++GFC  G++  A      +   G   D V++N L+NG+C+
Sbjct: 216 KKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCR 275

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              V +AL +   M+ KG  P V TYN+L  G+ ++ + E A+++  +M     + +T T
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVT 335

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T I  LCK   I  A +L R L       D+  +N LI GLC S     A E+F  + 
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           +    P+  TY+I+I  LC + ++ +A  L  +ME +  A + + ++ LI G  +     
Sbjct: 396 NKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIE 455

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              E+  +M+   V   +   + ++D L KN+
Sbjct: 456 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNK 487



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 188/411 (45%), Gaps = 81/411 (19%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G  P++YTYN LI+  CK+G       I    ILR C +PN  T+N+LI  L  E+ I  
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILREC-SPNTVTYNTLISALCKENEIEA 351

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L   L + G  P+V T+NTLI GLC + +  IA+ +FEEM N        CKP+  T
Sbjct: 352 ATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG------CKPDEFT 405

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +ID LC E  + +A  L  +M+      + V YN+LI GLC +    +A+ +F +M 
Sbjct: 406 YSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN------------- 316
             GV  S VT+N ++D LCKN++++EAS+L+D M+  G++P+  TYN             
Sbjct: 466 LLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIE 525

Query: 317 ----------------------TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
                                 TL+ G C  G+++ A +L  S++  G      +YN +I
Sbjct: 526 KAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVI 585

Query: 355 NGYCKNKEVEEALSLYREM------------------------------------VSKGI 378
                 K  +E + L+REM                                    + KGI
Sbjct: 586 QALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGI 645

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
            P   ++  L  GL  +   +  ++L + +      ++    T+ I G  K
Sbjct: 646 LPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERE--TSMIRGFLK 694


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/512 (31%), Positives = 271/512 (52%), Gaps = 19/512 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN +TY  LI+  CK G++   +     +      P  A  N +IKGL    R  +A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +    C P++IT+N L++ L ++G    A  +FE M   +      C PN VTY+T+
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVVTYTTV 142

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I+GLCK+G +D+A  L   M +    P+V+TY+ L+ GLC A   ++   L  EM  +G 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           QP V+ +N +++ LCK+R++DEA  L+ LM++ G  P   TYN+LM+ FC   +++RA  
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M   GC  D ++YN +I G C++  +++A +L ++MV+    P V+TY+T+  GL 
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC 322

Query: 394 EIHQV------EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  +V      E A ++ + M++ G   +  TY   I+GLC+     +A+ L R  R++ 
Sbjct: 323 KDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR--RMID 380

Query: 448 CEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            E+  D+ +++ +I  LCKS  L  A+++F  +      PN V Y  +I GL   G++DK
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +F  M E +  P V T++ ++ G   +    +   ++  M  K+  PD +    ++ 
Sbjct: 441 AVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 566 LLVKNEISLKSLPSFLVQERQG---EVGESNV 594
            L +     ++   F   E +G   EVG  NV
Sbjct: 500 GLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 260/517 (50%), Gaps = 23/517 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           ++A+ + D M R    PP V+  N ++  L K   +   L        T   P++ T+NI
Sbjct: 47  DQAYELLDEM-RDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105

Query: 102 LINCFCKIGRVSLGFIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           L++   K GRV   F  F  +  S  C  PN  T+ ++I GL  + ++  A  L   +  
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNVITY+ L+ GLC+ G T     L +EM     +      P+ + Y+T+++GLCK
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCK 218

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              +D+A  L   M      P VVTYNSL+   C +   + A RL   M ++G  P V+ 
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC------LMGKINRAEE 333
           +N ++  LC++ ++D+A  LL  MV     P+  TY+T++DG C         K+  A E
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +   M+  GC  +  +Y ++I G C+ ++ ++AL+L R M+   + P + +++ +   L 
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           + H ++ A K+F  M       +   Y   IDGL K G + +AV +F  L +      + 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVA 457

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++DGLC  GR++ A  +   + H    P+  +Y  +I+GLC    +++A +LF  +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           E    A +V  +++L++   +    S  + + +K+ E
Sbjct: 518 EAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 214/408 (52%), Gaps = 16/408 (3%)

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N  +N L R G    A+ LF E           C PN  TY ++I GLCK G +D+A  L
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYEL 52

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+D  I P V  +N +I GLC A  + +A   F  +      P ++TFN+++D L K
Sbjct: 53  LDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVK 112

Query: 290 NRKMDEASRLLDLM-VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           + +++EA ++ + M       PN  TY T+++G C  GK++RA EL   M   GC  + +
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y++L+ G CK    ++  +L +EM  +G +P V+ YNTL  GL +  +++ AL+L   M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            R G      TY + ++  C++  +  A  L + +    C  D+  YN +I GLC+  RL
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD------KARDLFLDMEENAAAPDV 522
             A  L   +     VP+V+TY+ +I GLC D ++D       A ++   M++    P+ 
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            T+ ++I G  R  +  +   LL +M + +V+PD S  S+V+  L K+
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 217/430 (50%), Gaps = 18/430 (4%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  LF + +   C PN  TY +LI+GLC+ G    A  L +EM +          P   
Sbjct: 16  QAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG------IPPGVA 66

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            ++ +I GLCK G    A   F  +      PD++T+N L+  L  +    EA ++F E 
Sbjct: 67  VHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF-ES 125

Query: 269 MDQGVQ--PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           M    Q  P+VVT+  +++ LCK+ K+D A  LLDLM + G  PN  TY+ L++G C  G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + ++   L   M   G + D + YN L+NG CK++ ++EAL L + M+  G  PTVVTYN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L        QV+ A +L   M   G   D   Y T I GLC++  + +A  L + +   
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCS------LPHGVLVPNVVTYNIMIQGLCND 500
           +C  D+  Y+ +IDGLCK  R+   W+L  +      +      PN  TY ++I+GLC  
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            +  +A  L   M ++   PD+ +F M+I    + ++     ++   M E++  P+    
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425

Query: 561 SIVVDLLVKN 570
           + ++D L K 
Sbjct: 426 AALIDGLSKG 435



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 53/387 (13%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGL 92
           EG       ++ F +   M R     P V  +N LL  L K++  D  L        +G 
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTR-RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           +P + TYN L+  FC+  +V   F     +      P+   +N++I GL  ++R+ +A A
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL-----FEEMANGNGEIGVVCKPNT 207
           L  ++ A  C P+VITY+T+I+GLC+         L       EM    G     C PN 
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG-----CPPNA 352

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+ +I+GLC+     +A AL  +M D  + PD+ +++ +I  LC ++D + A ++F  
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGM 412

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M ++  +P+ V +  ++D L K  ++D+A R+ +LMV+   RP   TYN+++DG C +G+
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGR 471

Query: 328 INRA-----------------------------------EELFGSMESMGCKHDDVSYNI 352
           I  A                                    ELF ++E+ G   +   YN+
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIK 379
           L+N  CK K + +A  +  +++  G K
Sbjct: 532 LVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/578 (31%), Positives = 289/578 (50%), Gaps = 54/578 (9%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RL 87
           D  ++EG+++     +A+ +F  M+    SP  V ++N L+  L K K          ++
Sbjct: 165 DGFSKEGEVD-----KAYELFYKMIEQSVSPD-VVTYNSLIDGLCKTKEMVKSERVLEQM 218

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
              G+ PN  TYN LI  +   G        F  +  S   P     NS I  L   +RI
Sbjct: 219 VDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRI 278

Query: 148 MEAAALFTKLKAFGCEPNVITYNTL----------------------------------- 172
            EA  +F  +   G +PN+I+Y+TL                                   
Sbjct: 279 KEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNIL 338

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           IN   R G    A+ +FE+M N     G++  P+TVT++T+I  LC+ G +D A   F  
Sbjct: 339 INAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRIGRLDDALHKFNH 392

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP-SVVTFNVIMDELCKNR 291
           M D  + P    Y  LI G C+  +  +AK L  EMM++ + P  V  F+ I++ L K  
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++ E   ++DLMVQ G RPN  T+N+LM+G+CL+G +  A  L  +M S+G + +   Y 
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            L++GYCKN  +++AL+++R+M+ KG+KPT V YN +  GLF+  +   A K+F EM   
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G     +TY   + GLC+N    EA  L   L  +  + DI  +N +I  + K GR + A
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 632

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ELF ++    LVP V TYN+MI  L  +   ++A +LF+ +E++  APD    + ++  
Sbjct: 633 KELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRM 692

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++  E +K +  L  + E  +  +AS +S++  L  +
Sbjct: 693 LLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSR 730



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 244/478 (51%), Gaps = 7/478 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P +YTYNILI+C+ ++ R  L    FGR+LR+   P+  ++N+LI G   E  + +A  L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F K+      P+V+TYN+LI+GLC+T   + +  + E+M +         +PN  TY+++
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG------IRPNNKTYNSL 233

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G    G   ++  +F +M    + P VV  NS IH LC  N   EAK +F  M+ +G 
Sbjct: 234 IYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGP 293

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P++++++ ++            + L++LMV +G+ PN   +N L++ +   G +++A  
Sbjct: 294 KPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAML 353

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +F  M++ G   D V++  +I+  C+   +++AL  +  MV  G+ P+   Y  L  G  
Sbjct: 354 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCC 413

Query: 394 EIHQVEHALKLFDE-MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
              ++  A +L  E M +D      + +++ I+ L K G + E  ++   +       ++
Sbjct: 414 NHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNV 473

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             +N L++G C  G ++ A+ L  ++    + PN   Y  ++ G C +G++D A  +F D
Sbjct: 474 VTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRD 533

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           M      P  + +++++HG  +    +   ++ H+M E           +V+  L +N
Sbjct: 534 MLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRN 591



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 183/413 (44%), Gaps = 48/413 (11%)

Query: 70  FNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           FNIL+ + A+    D  +         G+ P+  T+  +I+  C+IGR+      F  ++
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394

Query: 124 RSCFTPNAATFNSLIKG------------------------------------LHAESRI 147
                P+ A +  LI+G                                    L  E R+
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRV 454

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
            E   +   +   G  PNV+T+N+L+ G C  G+   A  L + MA+    IG+  +PN 
Sbjct: 455 AEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS----IGI--EPNC 508

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
             Y T++DG CK G +D A  +F  M  + + P  V YN ++HGL  A     AK++F E
Sbjct: 509 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHE 568

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++ G   S+ T+ V++  LC+N   DEA+ LL+ +    V+ +  T+N ++     +G+
Sbjct: 569 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 628

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A+ELF ++ + G      +YN++I+   K +  EEA +L+  +   G  P     N 
Sbjct: 629 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 688

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           +   L +  +V  A      +  + +  +  T +       + G   E ++L 
Sbjct: 689 IVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 6/268 (2%)

Query: 331 AEELFGSMESMGCKHDDV------SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           A ELF  M+   C H         +YNILI+ Y +    E AL+++  ++  G+ P V +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNTL  G  +  +V+ A +LF +M    V+ D  TY + IDGLCK   ++++  +   + 
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 + + YN LI G   +G  K +  +F  +    L+P VV  N  I  LC   ++ 
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A+D+F  M      P++I++  L+HG+      + +N L++ M  K ++P+    +I++
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 565 DLLVKNEISLKSLPSFLVQERQGEVGES 592
           +   +  +  K++  F   + +G + ++
Sbjct: 340 NAYARCGMMDKAMLIFEDMQNKGMIPDT 367


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 262/500 (52%), Gaps = 18/500 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+    +    D       ++  +GL P+   YN L+N  CK  ++      
Sbjct: 160 PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKL 219

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ +   P+  ++N+++  L    +  EA  +  K+    C P+V+TYN+L++G C+
Sbjct: 220 LEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCK 279

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  L E+M      +G  C P  +TY+T+I G  +   +  A  +   M    I
Sbjct: 280 VSKMDEAERLLEDM------VGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGI 333

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD+VTYN L+ GLC A    EA  L   M+++   P VVT++++++ LCK  K+D+A  
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL++M++RG +PN  T+NT++DGFC  GK++   ++   M+ + C  D V+Y+ LI+GYC
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +++A ++       GI P   +Y+++  GL    +VE A ++ D M + G    + 
Sbjct: 454 KANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   I GLC      EA+++ + +    CE ++  Y+ LI+GLCK+ R++ A  +   +
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVM 567

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                VP+V TY  +I G C   +MD A   F  M ++   PD + +++LI GF +    
Sbjct: 568 LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNV 627

Query: 539 SKVNELLHKMKEKKVMPDAS 558
            K  E++  M EK   PDA+
Sbjct: 628 EKAIEVMQLMLEKGCNPDAA 647



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 166/569 (29%), Positives = 284/569 (49%), Gaps = 58/569 (10%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYT 98
           + P E +  F       PS P  S++  L+   ++  +    L       A    P++ T
Sbjct: 3   VRPLEGYSFFRERFS-DPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61

Query: 99  YNILINCFCKIGRVSLGFIAF-GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +N ++  +C+IG +      F G++  S   P A T+  LI GL    RI EA  L  ++
Sbjct: 62  HNTILKAYCQIGDLDRALSHFRGKMWCS---PTAFTYCILIHGLCQCQRIDEAYQLLDEM 118

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
               C P+   YN LI GLC+ G    A N+ + M   +      C P+ +TY+++I G 
Sbjct: 119 IQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS------CVPDVITYTSLIVGC 172

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+   +D+A+ L  +MK+  + PD V YN+L++GLC  N   E  +L  EM++ G +P  
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL--- 334
            ++N ++  LC++ K +EA ++L+ M+++   P+  TYN+LMDGFC + K++ AE L   
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292

Query: 335 -----------------------------FGSMESM---GCKHDDVSYNILINGYCKNKE 362
                                        +  ME M   G   D V+YN L++G CK  +
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +EEA  L   MV K   P VVTY+ L  GL ++ +V+ A  L + M   G   +  T+ T
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG CK G + E  ++   ++ + C  D+  Y+ LIDG CK+ R++ A+ +        
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------G 466

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+  +Y+ M++GLC+ G++++A+++   M +    P    + ++I G   +    +  
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++L  M E+   P+    SI+++ L K +
Sbjct: 527 KMLQVMSERGCEPNLYTYSILINGLCKTK 555



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 268/523 (51%), Gaps = 19/523 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNI 101
           +EA+ + D M++     P  + +N L+A L K    D   N   +       P++ TY  
Sbjct: 109 DEAYQLLDEMIQ-KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTS 167

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI   C+   +        ++  S  TP+   +N+L+ GL  ++++ E + L  ++   G
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+  +YNT++  LC +G    A  + E+M      I   C P+ VTY++++DG CK  
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKM------IEKKCGPDVVTYNSLMDGFCKVS 281

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+A+ L   M      P V+TY +LI G   A+   +A R+  +M   G+ P +VT+N
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYN 341

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D LCK  K++EA  LL++MV++   P+  TY+ L++G C +GK++ A  L   M   
Sbjct: 342 CLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC+ + V++N +I+G+CK  +V+E   +   M      P VVTY+TL  G  + ++++ A
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             +       G++ D  +Y++ ++GLC  G + EA E+   +    C      Y  +I G
Sbjct: 462 FAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGG 515

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC   R   A ++   +      PN+ TY+I+I GLC   +++ A ++   M E    PD
Sbjct: 516 LCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPD 575

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           V T+  LI GF +IN+     +    M++    PD    +I++
Sbjct: 576 VATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILI 618



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 287/579 (49%), Gaps = 32/579 (5%)

Query: 10  SFSFASAPISAF-RSNFSSLLVHF-RDLTTREGDINVITPN---EAFC--------IFDY 56
           S S   A I+ F R+  S +++    ++  R    +VIT N   +A+C        +  +
Sbjct: 23  SNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF 82

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIG 110
             +M  SP   + + IL+  L + +  D        +      P+   YN LI   CK+G
Sbjct: 83  RGKMWCSPTAFT-YCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           ++         +L     P+  T+ SLI G    + + EA  L  K+K  G  P+ + YN
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            L+NGLC+         L EEM     E      P+T +Y+T++  LC+ G  ++A  + 
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGRE------PDTFSYNTVVACLCESGKYEEAGKIL 255

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M ++   PDVVTYNSL+ G C  +  +EA+RL  +M+ +   P+V+T+  ++    + 
Sbjct: 256 EKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRA 315

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            ++ +A R+++ M + G+ P+  TYN L+DG C  GK+  A EL   M    C  D V+Y
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY 375

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           +IL+NG CK  +V++A  L   M+ +G +P +VT+NT+  G  +  +V+   K+ + M+ 
Sbjct: 376 SILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
                D  TY+T IDG CK   + +A        IL    D  +Y+ +++GLC +G+++ 
Sbjct: 436 VSCTPDVVTYSTLIDGYCKANRMQDA------FAILGISPDKASYSSMLEGLCSTGKVEE 489

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A E+   +      P    Y ++I GLC+  + D+A  +   M E    P++ T+ +LI+
Sbjct: 490 AQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILIN 549

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           G  +         +L  M EK  +PD +  + ++D   K
Sbjct: 550 GLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCK 588



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 243/474 (51%), Gaps = 18/474 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N LL  L K    +        +   G  P+ ++YN ++ C C+ G+       
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKI 254

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++     P+  T+NSL+ G    S++ EA  L   +    C P VITY TLI G  R
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSR 314

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  + E+M       G+   P+ VTY+ ++DGLCK G +++A  L   M +++ 
Sbjct: 315 ADRLADAYRVMEDMFKA----GI--SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVTY+ L++GLC     ++A+ L   M+++G QP++VTFN ++D  CK  K+DE  +
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L+LM +    P+  TY+TL+DG+C   K NR ++ F  +   G   D  SY+ ++ G C
Sbjct: 429 VLELMKEVSCTPDVVTYSTLIDGYC---KANRMQDAFAIL---GISPDKASYSSMLEGLC 482

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              +VEEA  +   M  +G  PT   Y  +  GL ++ + + ALK+   M   G   +  
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLY 542

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY+  I+GLCK   + +A+ +   +    C  D+  Y  LIDG CK  ++  A++ F ++
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTM 602

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                 P+ + YNI+I G C  G ++KA ++   M E    PD  T+  L+   
Sbjct: 603 RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 193/350 (55%), Gaps = 19/350 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNIL 102
           +A+ + + M +   SP  V+ +N LL  L K    +        +      P++ TY+IL
Sbjct: 320 DAYRVMEDMFKAGISPDLVT-YNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSIL 378

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N  CK+G+V    +    +L     PN  TFN++I G     ++ E   +   +K   C
Sbjct: 379 VNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSC 438

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V+TY+TLI+G C+      A  +          +G+   P+  +YS++++GLC  G 
Sbjct: 439 TPDVVTYSTLIDGYCKANRMQDAFAI----------LGI--SPDKASYSSMLEGLCSTGK 486

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V++A+ +   M  +   P    Y  +I GLC     +EA ++   M ++G +P++ T+++
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LCK +++++A  +LD+M+++G  P+  TY +L+DGFC + K++ A + F +M   G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           C+ D ++YNILI+G+C++  VE+A+ + + M+ KG  P   TY +L   L
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 178/548 (32%), Positives = 280/548 (51%), Gaps = 25/548 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------------ 85
           R GD+    P +A  +FD +L+    P  + + N LL ++A+     +            
Sbjct: 74  RSGDLG---PEDALDLFDELLQ-RARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMF 129

Query: 86  ----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
               R  A  + P++ T+ ILI+C C  G ++LGF A G+I+++     A TF  L++ L
Sbjct: 130 NRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTL 189

Query: 142 HAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
            AE R  +A  +   ++   GC P+V +Y TL+ GLC       A  L   MA    E G
Sbjct: 190 CAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMA----EDG 245

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C PN V+Y+T+I G  KEG V KA  LF +M D  I P+VVT NS+I GLC     ++
Sbjct: 246 DNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDK 305

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A+ +  +M+D+ + P+  T+N ++     + +  EA R+L  M + G RPN  TY+ L+D
Sbjct: 306 AEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLID 365

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
             C  G    A E+F SM   G K +  +Y  L++GY     + +  ++   MV  G++P
Sbjct: 366 CLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRP 425

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
               +N       +  +++ A   F++MQ+ G   D   YTT IDGLCK G + +A+  F
Sbjct: 426 GRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRF 485

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +       DI  +N LI G    G+ + A ELF  +    + PNV T+N MI  L  +
Sbjct: 486 CQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKE 545

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++ +AR LF  M    A P+V++++ +IHG+    E  +V +LL  M    + P A   
Sbjct: 546 GKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTF 605

Query: 561 SIVVDLLV 568
           + ++D +V
Sbjct: 606 NTLLDGMV 613



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 216/487 (44%), Gaps = 68/487 (13%)

Query: 57  MLRMHPS---PPPVSSFNILLASLAKNKHYDTRLNATGLF--------PNLYTYNILINC 105
           +LR  P     P V S+  LL  L   K  +       +         PN+ +Y  +I+ 
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           F K G V   +  F ++L     PN  T NS+I GL     + +A A+  ++      PN
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
             TYN+LI+G   +G    A+ + +EM+  +G+     +PN VTYS +ID LCK G   +
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSR-DGQ-----RPNVVTYSMLIDCLCKSGLHAE 375

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGL--------------------------------- 252
           A+ +F  M      P+  TY SL+HG                                  
Sbjct: 376 AREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIY 435

Query: 253 --CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
             C     +EA   F +M  QG  P +V +  ++D LCK  ++D+A      M+  G+ P
Sbjct: 436 AYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP 495

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  T+NTL+ GF L GK  +AEELF  M   G   +  ++N +I+   K  +V EA  L+
Sbjct: 496 DIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLF 555

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             M   G KP VV+YNT+  G F   +V   +KL D+M   G+     T+ T +DG+   
Sbjct: 556 DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM 615

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G                 + D+     LID  C+ GR++    LF  +       + +T 
Sbjct: 616 GL----------------KPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITE 659

Query: 491 NIMIQGL 497
           NI ++G+
Sbjct: 660 NIKLRGV 666



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 205/442 (46%), Gaps = 41/442 (9%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +A+++F  MA    +      P+  T+  +I   C  G ++   A   Q+    +    V
Sbjct: 124 LAVSMFNRMARAGAK---KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAV 180

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           T+  L+  LC     ++A  + +  M + G  P V ++  ++  LC  +K +EA+ L+ +
Sbjct: 181 TFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHM 240

Query: 303 MVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           M + G    PN  +Y T++ GF   G + +A  LF  M   G   + V+ N +I+G CK 
Sbjct: 241 MAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 300

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + +++A ++ ++M+ + I P   TYN+L  G     Q   A+++  EM RDG   +  TY
Sbjct: 301 QAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTY 360

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL------------------ 462
           +  ID LCK+G   EA E+F ++     + +   Y  L+ G                   
Sbjct: 361 SMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQ 420

Query: 463 -----------------CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                            CK GRL  A   F  +     +P++V Y  +I GLC  G++D 
Sbjct: 421 NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDD 480

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A   F  M ++  +PD+ITF+ LIHGF    +  K  EL ++M ++ + P+ +  + ++D
Sbjct: 481 AMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMID 540

Query: 566 LLVKNEISLKSLPSFLVQERQG 587
            L K     ++   F +  R G
Sbjct: 541 KLFKEGKVTEARKLFDLMPRAG 562


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 279/548 (50%), Gaps = 23/548 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFC 107
           +L   PS     S+N +LA+L +    D  L    +          PN  +Y  L+   C
Sbjct: 46  LLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALC 105

Query: 108 KIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
              R +   +   R ++ C   P+  T+ +LI+GL   + +  A  L  ++   G EPNV
Sbjct: 106 ADRRAAQA-VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNV 164

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + Y+ L++G C+TG       +FEEM +G G      +P+ V Y+ +ID LC+ G V KA
Sbjct: 165 VVYSCLLHGYCKTGRWESVGKVFEEM-SGRG-----IEPDVVMYTALIDSLCRHGKVKKA 218

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +   M +  + P+VVTYN LI+ +C      EA  L   M ++GVQP VVT+N ++  
Sbjct: 219 ARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITG 278

Query: 287 LCKNRKMDEASRLLDLMVQ--RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           L    +MDEA  LL+ M+Q    VRP+  T+N+++ G C +G + +A ++   M   GC+
Sbjct: 279 LSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR 338

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + V++N+LI G  +  +V++A+ L  EM S G++P   TY+ L  G  ++ QVE A   
Sbjct: 339 CNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESY 398

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             EM+  G+  +   Y   +  +C  G + +A +LF  +    C+LD  AY+ +I G  K
Sbjct: 399 LSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFK 457

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           SG  K A E    +    L+P+ VTY+I I      G +  A  +   M  +   PDV  
Sbjct: 458 SGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAV 517

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL---VKNEISLKSLPSFL 581
           FD LI G+    +  K+ EL  +M  K V  D  I+S +V  L   ++ +  L+SLP F 
Sbjct: 518 FDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGFD 577

Query: 582 VQERQGEV 589
            +  +G+V
Sbjct: 578 TEISKGDV 585


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/561 (29%), Positives = 280/561 (49%), Gaps = 41/561 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            +A  +F  M R     P V ++N+++ +L K +  D       ++   G  P+  TYN 
Sbjct: 282 GKACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNC 340

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+ +  +GR+      F ++      PN    NS +  L    R  EAA +F  + A G
Sbjct: 341 MIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKG 400

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK----------------- 204
            +P++++Y TL++G    G     + LF  M + NG I   C+                 
Sbjct: 401 HKPDIVSYCTLLHGYASEGWFADMIGLFNSMKS-NG-IAADCRVFNILIHAYAKRGMVDD 458

Query: 205 --------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
                         P+ VTYST+I    + G +  A   F QM    I P+   Y+S+I 
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518

Query: 251 GLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           G C      +AK L  EM+++G+ +P +V FN +++ LCK+ ++ +A  + DL+   G R
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER 578

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  T+ +L+DG+CL+GK+++A ++  +ME +G + D V+Y+ L++GY KN  + + L+L
Sbjct: 579 PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTL 638

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +REM  KG+KP  VTY  +  GLF   +   A K F EM   G       Y   + GLC+
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           N    EA+ LF+ L  +  +  I   N +I+ + K  R + A ELF ++    L+PN  T
Sbjct: 699 NNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y +MI  L  DG ++ A ++F  ME++   P     + +I   +   E +K    L K+ 
Sbjct: 759 YGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVD 818

Query: 550 EKKVMPDASIVSIVVDLLVKN 570
            K+++ +AS  S+++ L  + 
Sbjct: 819 GKRILLEASTTSLMLSLFSRK 839



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 181/603 (30%), Positives = 278/603 (46%), Gaps = 100/603 (16%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-----YDTRLNATGLFP--- 94
             ++ ++A  +FD + R   +P P  S N  L +LA+         D    A  LF    
Sbjct: 86  GTLSRDDAHHMFDELFR-QATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVC 144

Query: 95  -----------NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
                       ++TY+IL++C C+  R  LG + FG ILR+                  
Sbjct: 145 REQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRT------------------ 186

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN-LFEEMANGNGEIGVV 202
                            G + + IT +TL+  LC    T  A+N L   M+    E+G  
Sbjct: 187 -----------------GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMS----ELG-- 223

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN--INPDVVTYNSLIHGLCHANDWNE 260
           C PN  +YS I+ GLC      +A  LF  M  E    +P+VV YN++IHG     +  +
Sbjct: 224 CVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGK 283

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  LF EM  QGV+P VVT+N+I+D LCK R MD+A  +L  M   G +P+  TYN ++ 
Sbjct: 284 ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIH 343

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+  +G++  A ++F  M+S G   + V  N  +   CK+   +EA  ++  M +KG KP
Sbjct: 344 GYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKP 403

Query: 381 TVVTYNTLF------------LGLFE-----------------IHQ------VEHALKLF 405
            +V+Y TL             +GLF                  IH       V+ A+ +F
Sbjct: 404 DIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIF 463

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EMQ+ GV+ D  TY+T I    + G + +A+E F  +     + +   Y+ +I G C  
Sbjct: 464 TEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMH 523

Query: 466 GRLKFAWELFCSLPH-GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           G L  A EL   + + G+  P++V +N +I  LC DG++  A D+F  + +    PDVIT
Sbjct: 524 GGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVIT 583

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
           F  LI G+  + +  K  ++L  M+   V  D    S ++D   KN      L  F   +
Sbjct: 584 FTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQ 643

Query: 585 RQG 587
           R+G
Sbjct: 644 RKG 646



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 252/506 (49%), Gaps = 9/506 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++ TYN++I+  CK   +    +   ++  +   P+  T+N +I G     R+ EA
Sbjct: 295 GVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEA 354

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVT 209
           A +F K+K+ G  PN++  N+ +  LC+ G +  A  +F+ M A G+       KP+ V+
Sbjct: 355 AKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH-------KPDIVS 407

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y T++ G   EG+      LF  MK   I  D   +N LIH        ++A  +F EM 
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ 467

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            QGV P VVT++ ++    +  ++ +A    + MV RG++PN   Y++++ GFC+ G + 
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLV 527

Query: 330 RAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           +A+EL   M + G    D V +N +IN  CK+  V +A  ++  +   G +P V+T+ +L
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSL 587

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   + +++ A K+ D M+  GV  D  TY+T +DG  KNG I + + LFR ++    
Sbjct: 588 IDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGV 647

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + +   Y  ++ GL ++GR   A + F  +        V  Y I++ GLC +   D+A  
Sbjct: 648 KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAII 707

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  +        +   + +I+   ++    +  EL   +    ++P+ S   +++  L+
Sbjct: 708 LFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLL 767

Query: 569 KNEISLKSLPSFLVQERQGEVGESNV 594
           K+     +   F   E+ G V  S +
Sbjct: 768 KDGAVEDANNMFSSMEKSGIVPGSRL 793


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 160/488 (32%), Positives = 253/488 (51%), Gaps = 11/488 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ +T+ IL+   C+  ++       GR+      P+ A +N+LI G        +A   
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++    C P V+TY  +++GLC+ G T  A+ L +EM +        C PN  TY+ I
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG------CSPNIYTYNVI 121

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ++GLC+E  +D+AK +  +M      PDVVTYNS I GLC  +  +EA++    M    V
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PV 178

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VV++  +++ LCK+  +D ASR+LD M  RG  P+  TY++L+DGFC  G++ RA  
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L  SM  +GC+ + V+YN L+    +   + +A  +  EM  +G  P VV+YN    GL 
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  +V+ A  +FD M   G   +  +Y+  ++ LCK   + +A+ L    R     +DI 
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 454 AYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            Y  L+DGLCK GR   A  LF   L   +  P+V  YN+M+   C   Q+DKA  +   
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQ 418

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M E     +V+T+++L+HG    +  S    +L  M ++  +PD      +VD + K   
Sbjct: 419 MLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477

Query: 573 SLKSLPSF 580
           S  +L  F
Sbjct: 478 SAAALELF 485



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 264/520 (50%), Gaps = 25/520 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +F ILL  L ++   +       R+   G  P+   YN LI+ + K       F  
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++++   P   T+ +++ GL    R  +A  L  +++  GC PN+ TYN ++ GLC 
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  + EEMA   G       P+ VTY++ I GLCK   VD+A+    +M    +
Sbjct: 128 ERKLDEAKKMLEEMAV-RGYF-----PDVVTYNSFIKGLCKCDRVDEARKFLARMP---V 178

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVV+Y ++I+GLC + D + A R+  +M ++G  P VVT++ ++D  CK  +++ A  
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LLD M++ G RPN   YN+L+     +G I +AE++   ME  G   D VSYN  I+G C
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K + V++A +++  MV +G  P   +Y+ L   L +  +++ A+ L ++ +      D  
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 419 TYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            YT  +DGLCK G   EA  LF + L    CE D+  YN ++D  CK  ++  A ++   
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI--- 415

Query: 478 LPHGVLVP----NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
             H  ++     NVVT+NI++ GLC D ++  A  + L M +    PD +T+  L+    
Sbjct: 416 --HKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 473

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
           +  + +   EL  +  +   +PD    S ++  LV   ++
Sbjct: 474 KCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMA 513



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 259/537 (48%), Gaps = 62/537 (11%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
           +R     P + ++N+++  L + +  D        +   G FP++ TYN  I   CK  R
Sbjct: 106 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 165

Query: 112 V--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           V  +  F+A     R   TP+  ++ ++I GL     +  A+ +  ++   GC P+V+TY
Sbjct: 166 VDEARKFLA-----RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTY 220

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           ++LI+G C+ G    A+ L + M      + + C+PN V Y++++  L + G + KA+ +
Sbjct: 221 SSLIDGFCKGGEVERAMGLLDSM------LKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 274

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
            ++M+     PDVV+YN+ I GLC A    +AK +F  M+++G  P+  +++++++ELCK
Sbjct: 275 LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCK 334

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS-MESMGCKHDDV 348
            +++D+A  L++   ++    +   Y  L+DG C  G+ + A  LF   ++   C+ D  
Sbjct: 335 KKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394

Query: 349 SYNILINGYCKNKEVEEALSLYREM----------------------------------V 374
            YN++++ +CK +++++AL ++++M                                  V
Sbjct: 395 FYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMV 454

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            +G  P  VTY TL   + +  +   AL+LF+E  + G   D  TY+  I GL       
Sbjct: 455 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAE 514

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EA  LF        +LD+  +N +I G  ++G      +LF  L    + PN  T+   I
Sbjct: 515 EAYLLFT-------KLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEI 567

Query: 495 QG-LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            G L     + KAR LF    +    PD+   + LI  F +  +  +   + + MK+
Sbjct: 568 SGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 259/558 (46%), Gaps = 47/558 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNIL 102
            +AF     M++ H  P  V+  NI+       +  D       +   G  PN+YTYN++
Sbjct: 62  GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI 121

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +   C+  ++         +    + P+  T+NS IKGL    R+ EA     ++     
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV--- 178

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V++Y T+INGLC++G    A  + ++M N        C P+ VTYS++IDG CK G 
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG------CTPDVVTYSSLIDGFCKGGE 232

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V++A  L   M      P++V YNSL+  L       +A+ + +EM  +G  P VV++N 
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +D LCK  ++ +A  + D MV+RG  PNA +Y+ L++  C   +++ A  L        
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KPTVVTYNTLFLGLFEIHQVEHA 401
              D + Y +L++G CK    +EA +L+ +++ + I +P V  YN +     +  Q++ A
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412

Query: 402 LKLFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           L++  +M +R+    +  T+   + GLC +  + +A  +  T+       D   Y  L+D
Sbjct: 413 LQIHKQMLERN--CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVD 470

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTY----------------------------NI 492
            +CK G+   A ELF     G  VP+VVTY                            N 
Sbjct: 471 AMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNA 530

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG-FIRINEPSKVNELLHKMKEK 551
           MI G   +G  D    LF+++ E+   P+  TF   I G  ++     K   L  +  + 
Sbjct: 531 MILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKG 590

Query: 552 KVMPDASIVSIVVDLLVK 569
              PD  + + ++D+  K
Sbjct: 591 GFFPDLFVANTLIDVFAK 608



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 194/368 (52%), Gaps = 3/368 (0%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C+P+  T++ ++ GLC+   ++KA+ L  +MK+    PD   YN+LI G   A D+ +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           +   EM+     P+VVT+  I+D LCK  +  +A +LLD M  +G  PN  TYN +++G 
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   K++ A+++   M   G   D V+YN  I G CK   V+EA      M    + P V
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 182

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           V+Y T+  GL +   ++ A ++ D+M   G   D  TY++ IDG CK G +  A+ L  +
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +  L C  ++ AYN L+  L + G +  A ++   +      P+VV+YN  I GLC   +
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           + KA+ +F  M E    P+  ++ ML+    +  E      L+ + +EK  + D  + ++
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 563 VVDLLVKN 570
           ++D L K 
Sbjct: 363 LLDGLCKG 370



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 179/354 (50%), Gaps = 4/354 (1%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M D++  PD  T+  L+ GLC +N   +A++L   M + G  P    +N ++    K + 
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             +A + L  MV+    P   TY  ++DG C  G+   A +L   M   GC  +  +YN+
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++ G C+ ++++EA  +  EM  +G  P VVTYN+   GL +  +V+ A K    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  D  +YTT I+GLCK+G +  A  +   +    C  D+  Y+ LIDG CK G ++ A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L  S+      PN+V YN ++  L   G + KA D+ ++ME     PDV++++  I G 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
            +     K   +  +M E+   P+AS  S++V+ L K +  L    + + Q R+
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKK-ELDDAITLVEQARE 350


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 152/500 (30%), Positives = 262/500 (52%), Gaps = 16/500 (3%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIM 148
           +G   +++ YN L+  +C+ G++     A  R++ S    P+A T+  +I+GL    R+ 
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLD----AARRLIASMPVAPDAYTYTPIIRGLCDRGRVG 162

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
           EA +L   +   GC+P+V+TY  L+  +C++     A+ + +EM A G       C PN 
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-------CTPNI 215

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+ II+G+C+EG VD A+    ++      PD V+Y +++ GLC A  W + + LF E
Sbjct: 216 VTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 275

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           MM++   P+ VTF++++   C+   ++ A ++L+ M   G   N    N +++  C  G+
Sbjct: 276 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A +   +M S GC  D +SY  ++ G C+ +  E+A  L +EMV K   P  VT+NT
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
               L +   +E A  L ++M   G   +  TY   ++G C  G +  A+ELF ++    
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---P 452

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ +   Y  L+ GLC + RL  A EL   +      PNVVT+N+++   C  G MD+A 
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +L   M E+   P++IT++ L+ G        +  ELLH +    V PD    S ++ +L
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572

Query: 568 VKNEISLKSLPSFLVQERQG 587
            + +   +++  F + +  G
Sbjct: 573 SREDRVEEAIKMFHIVQDLG 592



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 259/512 (50%), Gaps = 16/512 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  + D ML      P V ++ +LL ++ K+  +         + A G  PN+ TYN++
Sbjct: 163 EALSLLDDMLH-RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C+ GRV        R+    F P+  ++ +++KGL A  R  +   LF ++    C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T++ L+   CR G    A+ + E+M+ G+G     C  NT   + +I+ +CK+G 
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHG-----CAANTTLCNIVINTICKQGR 335

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A      M     +PD ++Y +++ GLC A  W +AK L  EM+ +   P+ VTFN 
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  LC+   +++A+ L++ M + G   N  TYN L++GFC+ G+++ A ELF    SM 
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMP 452

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK + ++Y  L+ G C  + ++ A  L  EM+ K   P VVT+N L     +   ++ A+
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 512

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L ++M   G   +  TY T +DG+  +    EA+EL   L       DI  Y+ +I  L
Sbjct: 513 ELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            +  R++ A ++F  +    + P  V YN ++  LC     D A D F  M  N   P+ 
Sbjct: 573 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNE 632

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +T+  LI G    +   +  +LL ++  + V+
Sbjct: 633 LTYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 245/514 (47%), Gaps = 21/514 (4%)

Query: 61  HPSPPPVSSFN---------ILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
            P  P  SS N         I    LA+      R  + G  P++Y    LI   C+ GR
Sbjct: 34  RPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGR 93

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            S          RS    +   +N+L+ G     ++  A  L   +      P+  TY  
Sbjct: 94  TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTP 150

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I GLC  G    AL+L ++M +        C+P+ VTY+ +++ +CK     +A  +  
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRG------CQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M+ +   P++VTYN +I+G+C     ++A+     +   G QP  V++  ++  LC  +
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           + ++   L   M+++   PN  T++ L+  FC  G + RA ++   M   GC  +    N
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           I+IN  CK   V++A      M S G  P  ++Y T+  GL    + E A +L  EM R 
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
               +  T+ TFI  LC+ G I +A  L   +    CE++I  YN L++G C  GR+  A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ELF S+P     PN +TY  ++ GLCN  ++D A +L  +M +   AP+V+TF++L+  
Sbjct: 445 LELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           F +     +  EL+ +M E    P+    + ++D
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 3/290 (1%)

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N  +  L     + EA+RL+D    RG  P+      L+   C  G+ + A  +  + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   D  +YN L+ GYC+  +++ A  L   + S  + P   TY  +  GL +  +V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL L D+M   G      TYT  ++ +CK+    +A+E+   +R   C  +I  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G+C+ GR+  A E    L      P+ V+Y  +++GLC   + +   +LF +M E    P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + +TFDML+  F R     +  ++L +M       + ++ +IV++ + K 
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/512 (31%), Positives = 271/512 (52%), Gaps = 19/512 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN +TY  LI+  CK G++   +     +      P  A  N +I+GL    R  +A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +    C P++IT+N L++ L ++G    A  +FE M   +      C PN VTY+T+
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVVTYTTV 142

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I+GLCK+G +D+A  L   M +    P+V+TY+ L+ GLC A   ++   L  EM  +G 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           QP V+ +N +++ LCK+R++DEA  L+ LM++ G  P   TYN+LM+ FC   +++RA  
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M   GC  D ++YN +I G C++  +++A +L ++MV+    P V+TY+T+  GL 
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC 322

Query: 394 EIHQV------EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  +V      E A ++ + M++ G   +  TY   I+GLC+     +A+ L R  R++ 
Sbjct: 323 KDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR--RMID 380

Query: 448 CEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            E+  D+ +++ +I  LCKS  L  A+++F  +      PN V Y  +I GL   G++DK
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +F  M E +  P V T++ ++ G   +    +   ++  M  K+  PD +    ++ 
Sbjct: 441 AVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 566 LLVKNEISLKSLPSFLVQERQG---EVGESNV 594
            L +     ++   F   E +G   EVG  NV
Sbjct: 500 GLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 260/517 (50%), Gaps = 23/517 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           ++A+ + D M R    PP V+  N ++  L K   +   L        T   P++ T+NI
Sbjct: 47  DQAYELLDEM-RDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI 105

Query: 102 LINCFCKIGRVSLGFIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           L++   K GRV   F  F  +  S  C  PN  T+ ++I GL  + ++  A  L   +  
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNVITY+ L+ GLC+ G T     L +EM     +      P+ + Y+T+++GLCK
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCK 218

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              +D+A  L   M      P VVTYNSL+   C +   + A RL   M ++G  P V+ 
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC------LMGKINRAEE 333
           +N ++  LC++ ++D+A  LL  MV     P+  TY+T++DG C         K+  A E
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +   M+  GC  +  +Y ++I G C+ ++ ++AL+L R M+   + P + +++ +   L 
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           + H ++ A K+F  M       +   Y   IDGL K G + +AV +F  L +      + 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVA 457

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++DGLC  GR++ A  +   + H    P+  +Y  +I+GLC    +++A +LF  +
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           E    A +V  +++L++   +    S  + + +K+ E
Sbjct: 518 EAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 214/408 (52%), Gaps = 16/408 (3%)

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N  +N L R G    A+ LF E           C PN  TY ++I GLCK G +D+A  L
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYEL 52

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+D  I P V  +N +I GLC A  + +A   F  +      P ++TFN+++D L K
Sbjct: 53  LDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVK 112

Query: 290 NRKMDEASRLLDLM-VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           + +++EA ++ + M       PN  TY T+++G C  GK++RA EL   M   GC  + +
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y++L+ G CK    ++  +L +EM  +G +P V+ YNTL  GL +  +++ AL+L   M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            R G      TY + ++  C++  +  A  L + +    C  D+  YN +I GLC+  RL
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD------KARDLFLDMEENAAAPDV 522
             A  L   +     VP+V+TY+ +I GLC D ++D       A ++   M++    P+ 
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNA 352

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            T+ ++I G  R  +  +   LL +M + +V+PD S  S+V+  L K+
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/430 (31%), Positives = 217/430 (50%), Gaps = 18/430 (4%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  LF + +   C PN  TY +LI+GLC+ G    A  L +EM +          P   
Sbjct: 16  QAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRG------IPPGVA 66

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            ++ +I GLCK G    A   F  +      PD++T+N L+  L  +    EA ++F E 
Sbjct: 67  VHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF-ES 125

Query: 269 MDQGVQ--PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           M    Q  P+VVT+  +++ LCK+ K+D A  LLDLM + G  PN  TY+ L++G C  G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + ++   L   M   G + D + YN L+NG CK++ ++EAL L + M+  G  PTVVTYN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L        QV+ A +L   M   G   D   Y T I GLC++  + +A  L + +   
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCS------LPHGVLVPNVVTYNIMIQGLCND 500
           +C  D+  Y+ +IDGLCK  R+   W+L  +      +      PN  TY ++I+GLC  
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            +  +A  L   M ++   PD+ +F M+I    + ++     ++   M E++  P+    
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425

Query: 561 SIVVDLLVKN 570
           + ++D L K 
Sbjct: 426 AALIDGLSKG 435



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 53/387 (13%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGL 92
           EG       ++ F +   M R     P V  +N LL  L K++  D  L        +G 
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTR-RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           +P + TYN L+  FC+  +V   F     +      P+   +N++I GL  ++R+ +A A
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL-----FEEMANGNGEIGVVCKPNT 207
           L  ++ A  C P+VITY+T+I+GLC+         L       EM    G     C PN 
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG-----CPPNA 352

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+ +I+GLC+     +A AL  +M D  + PD+ +++ +I  LC ++D + A ++F  
Sbjct: 353 GTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGM 412

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M ++  +P+ V +  ++D L K  ++D+A R+ +LMV+   RP   TYN+++DG C +G+
Sbjct: 413 MSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGR 471

Query: 328 INRA-----------------------------------EELFGSMESMGCKHDDVSYNI 352
           I  A                                    ELF ++E+ G   +   YN+
Sbjct: 472 IEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNV 531

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIK 379
           L+N  CK K + +A  +  +++  G K
Sbjct: 532 LVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/525 (31%), Positives = 276/525 (52%), Gaps = 28/525 (5%)

Query: 65  PPVSSFNILL-----ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V ++N +L     ASL   + + + +   G+ PN+YTYNIL+   C  GR+       
Sbjct: 116 PSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-CEPNVITYNTLINGLCR 178
           G +  +   PNA T+N+L+        +  A  + + ++  G  +PN++T+N+++NGLC+
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +F+EM            P+ V+Y+T++ G CK G + ++ A+F +M    +
Sbjct: 236 AGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVT+ SLIH  C A +  +A  L  +M ++G++ + VTF  ++D  CK   +D+A  
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            ++ M + G++P+   YN L++G+C +G+++ A EL   ME+   K D V+Y+ +I+GYC
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++ A  L ++M+ KG+ P  +TY++L  GL E  ++  A +LF+ M + GV  D  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYTT IDG CK G + +A+ L   +       D+  Y+ LI+GL KS R K A  L   L
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 479 PHGVLVPNVVTYNIM---------------IQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            H   VP+ + Y+ +               ++G C  G M +A  ++  M +     D  
Sbjct: 530 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 589

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDLL 567
            + +LIHG  R     K      +M      P++ S +S+V  L 
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLF 634



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 249/471 (52%), Gaps = 28/471 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF-------PNLYTYNILINCFCKIGRVSLGFI 117
           P   ++N L+A+  +    D       L        PNL T+N ++N  CK GR+     
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 244

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  ++R    P+  ++N+L+ G      + E+ A+F+++   G  P+V+T+ +LI+  C
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 304

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G+   A+ L  +M     E G+  + N VT++ +IDG CK+GF+D A     +M+   
Sbjct: 305 KAGNLEQAVALVAQMR----ERGL--RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P VV YN+LI+G C     + A+ L  EM  + V+P VVT++ I+   CK   +D A 
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L   M+++GV P+A TY++L+ G C   ++N A ELF +M  +G + D+ +Y  LI+G+
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF----------DE 407
           CK   VE+ALSL+ EM+ KG+ P VVTY+ L  GL +  + + A +L           D 
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538

Query: 408 MQRDGV-----AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++ D +      A+ ++    + G C  G + EA ++++++     +LD   Y+ LI G 
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           C+ G ++ A      +      PN  +   +++GL  +G + +A +   D+
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 229/438 (52%), Gaps = 8/438 (1%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F++LI+   +  R   AAA      + G  P+V  YN ++  L           L   + 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
           +G         PN  TY+ ++  LC  G +++A  +   M+     P+ VTYN+L+   C
Sbjct: 146 HG-------VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198

Query: 254 HANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
            A + + A+R+   M ++G  +P++VTFN +++ LCK  +M+ A ++ D MV+ G+ P+ 
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            +YNTL+ G+C +G ++ +  +F  M   G   D V++  LI+  CK   +E+A++L  +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +G++   VT+  L  G  +   ++ AL   +EM++ G+      Y   I+G CK G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A EL R +   + + D+  Y+ +I G CK G L  A++L   +    ++P+ +TY+ 
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I+GLC + +++ A +LF +M +    PD  T+  LI G  +     K   L  +M  K 
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 553 VMPDASIVSIVVDLLVKN 570
           V+PD    S++++ L K+
Sbjct: 499 VLPDVVTYSVLINGLSKS 516



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 203/430 (47%), Gaps = 30/430 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           +FD M+R     P V S+N LL+       L ++    + +   GL P++ T+  LI+  
Sbjct: 245 VFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK G +        ++       N  TF +LI G   +  + +A     +++  G +P+V
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + YN LING C+ G   +A  L  EM           KP+ VTYSTII G CK G +D A
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKR------VKPDVVTYSTIISGYCKVGNLDSA 417

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L  +M  + + PD +TY+SLI GLC     N+A  LF  M+  GVQP   T+  ++D 
Sbjct: 418 FQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 477

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK   +++A  L D M+++GV P+  TY+ L++G     +   A  L   +       D
Sbjct: 478 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 537

Query: 347 DVSYNIL---------------INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           ++ Y+ L               + G+C    ++EA  +Y+ M+ +  K     Y+ L  G
Sbjct: 538 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL- 450
                 V  AL    +M R G + ++ +  + + GL + G ++EA    + L +  C L 
Sbjct: 598 HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL-LTCCPLA 656

Query: 451 DIQAYNCLID 460
           D +A   LID
Sbjct: 657 DAEASKALID 666


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 276/524 (52%), Gaps = 28/524 (5%)

Query: 65  PPVSSFNILL-----ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V ++N +L     ASL   + + + +   G+ PN+YTYNIL+   C  GR+       
Sbjct: 116 PSVPAYNAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-CEPNVITYNTLINGLCR 178
           G +  +   PNA T+N+L+        +  A  + + ++  G  +PN++T+N+++NGLC+
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +F+EM            P+ V+Y+T++ G CK G + ++ A+F +M    +
Sbjct: 236 AGRMEGARKVFDEMVREG------LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVT+ SLIH  C A +  +A  L  +M ++G++ + VTF  ++D  CK   +D+A  
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            ++ M + G++P+   YN L++G+C +G+++ A EL   ME+   K D V+Y+ +I+GYC
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++ A  L ++M+ KG+ P  +TY++L  GL E  ++  A +LF+ M + GV  D  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYTT IDG CK G + +A+ L   +       D+  Y+ LI+GL KS R K A  L   L
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 479 PHGVLVPNVVTYNIM---------------IQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            H   VP+ + Y+ +               ++G C  G M +A  ++  M +     D  
Sbjct: 530 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 589

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDL 566
            + +LIHG  R     K      +M      P++ S +S+V  L
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 249/471 (52%), Gaps = 28/471 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF-------PNLYTYNILINCFCKIGRVSLGFI 117
           P   ++N L+A+  +    D       L        PNL T+N ++N  CK GR+     
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 244

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  ++R    P+  ++N+L+ G      + E+ A+F+++   G  P+V+T+ +LI+  C
Sbjct: 245 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 304

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G+   A+ L  +M     E G+  + N VT++ +IDG CK+GF+D A     +M+   
Sbjct: 305 KAGNLEQAVALVAQMR----ERGL--RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P VV YN+LI+G C     + A+ L  EM  + V+P VVT++ I+   CK   +D A 
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L   M+++GV P+A TY++L+ G C   ++N A ELF +M  +G + D+ +Y  LI+G+
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF----------DE 407
           CK   VE+ALSL+ EM+ KG+ P VVTY+ L  GL +  + + A +L           D 
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538

Query: 408 MQRDGV-----AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++ D +      A+ ++    + G C  G + EA ++++++     +LD   Y+ LI G 
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           C+ G ++ A      +      PN  +   +++GL  +G + +A +   D+
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 229/438 (52%), Gaps = 8/438 (1%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F++LI+   +  R   AAA      + G  P+V  YN ++  L           L   + 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLSSMLR 145

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
           +G         PN  TY+ ++  LC  G +++A  +   M+     P+ VTYN+L+   C
Sbjct: 146 HG-------VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198

Query: 254 HANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
            A + + A+R+   M ++G  +P++VTFN +++ LCK  +M+ A ++ D MV+ G+ P+ 
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            +YNTL+ G+C +G ++ +  +F  M   G   D V++  LI+  CK   +E+A++L  +
Sbjct: 259 VSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +G++   VT+  L  G  +   ++ AL   +EM++ G+      Y   I+G CK G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A EL R +   + + D+  Y+ +I G CK G L  A++L   +    ++P+ +TY+ 
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I+GLC + +++ A +LF +M +    PD  T+  LI G  +     K   L  +M  K 
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 553 VMPDASIVSIVVDLLVKN 570
           V+PD    S++++ L K+
Sbjct: 499 VLPDVVTYSVLINGLSKS 516



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 214/456 (46%), Gaps = 30/456 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           +FD M+R     P V S+N LL+       L ++    + +   GL P++ T+  LI+  
Sbjct: 245 VFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK G +        ++       N  TF +LI G   +  + +A     +++  G +P+V
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + YN LING C+ G   +A  L  EM           KP+ VTYSTII G CK G +D A
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKR------VKPDVVTYSTIISGYCKVGNLDSA 417

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L  +M  + + PD +TY+SLI GLC     N+A  LF  M+  GVQP   T+  ++D 
Sbjct: 418 FQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 477

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK   +++A  L D M+++GV P+  TY+ L++G     +   A  L   +       D
Sbjct: 478 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 537

Query: 347 DVSYNIL---------------INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           ++ Y+ L               + G+C    ++EA  +Y+ M+ +  K     Y+ L  G
Sbjct: 538 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL- 450
                 V  AL    +M R G + ++ +  + + GL + G ++EA    + L +  C L 
Sbjct: 598 HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL-LTCCPLA 656

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           D +A   LID   K G +    ++ C +    L+P+
Sbjct: 657 DAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 210/334 (62%), Gaps = 6/334 (1%)

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A G +P+V TY T+INGLC+ G T+ A  LF++M    GE G  C+P+ VTYSTIID LC
Sbjct: 3   ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKM----GEAG--CQPDVVTYSTIIDSLC 56

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+  V++A  +F  MK + I+P++ TYNSLI GLC+ + W EA  +  EMM   + P++V
Sbjct: 57  KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 116

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TF+++++  CK   + EA  +L  M + GV PN  TY++LM+G+ L  ++  A +LF  M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            + GCK D  SYNILINGYCK K + EA  L+ EM+ +G+ P +V+YNTL  GL ++ ++
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A  LF  M  +G   D  TY+  +DG CK GY+ +A  LFR ++    + ++  YN L
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           ID +CKS  LK A +LF  L    L PN+  + +
Sbjct: 297 IDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKL 330



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 117/319 (36%), Positives = 182/319 (57%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +P+  TY+TII+GLCK G    A  LF +M +    PDVVTY+++I  LC     NEA  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F  M  +G+ P++ T+N ++  LC   +  EAS +L+ M+   + PN  T++ L++ FC
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G +  A  +  +M  MG + + V+Y+ L+NGY    EV EA  L+  M++KG KP V 
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +YN L  G  +  ++  A +LF+EM   G+  D  +Y T IDGLC+ G + EA +LF+ +
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+  Y+ L+DG CK G L  A+ LF ++    L PN+V YNI+I  +C    +
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 306

Query: 504 DKARDLFLDMEENAAAPDV 522
            +AR LF ++      P++
Sbjct: 307 KEARKLFSELFVQGLQPNM 325



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 194/335 (57%), Gaps = 6/335 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P+++TY  +IN  CKIG        F ++  +   P+  T++++I  L  + R+ 
Sbjct: 3   ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVN 62

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  +F+ +KA G  PN+ TYN+LI GLC       A  +  EM + N        PN V
Sbjct: 63  EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN------IMPNIV 116

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T+S +I+  CKEG V +A+ +   M +  + P+VVTY+SL++G     +  EA++LF  M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + +G +P V ++N++++  CK +++ EA +L + M+ +G+ P+  +YNTL+DG C +G++
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A +LF +M + G   D  +Y+IL++G+CK   + +A  L+R M S  +KP +V YN L
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
              + +   ++ A KLF E+   G+  + + +  F
Sbjct: 297 IDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/349 (34%), Positives = 197/349 (56%), Gaps = 23/349 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P V ++  ++  L K       + A GLF         P++ TY+ +I+  CK  RV+  
Sbjct: 8   PDVHTYTTIINGLCK---IGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
              F  +     +PN  T+NSLI+GL   SR  EA+A+  ++ +    PN++T++ LIN 
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C+ G+   A  + + M     E+GV  +PN VTYS++++G   +  V +A+ LF  M  
Sbjct: 125 FCKEGNVFEARGVLKTMT----EMGV--EPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           +   PDV +YN LI+G C A    EAK+LF EM+ QG+ P +V++N ++D LC+  ++ E
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L   M+  G  P+ CTY+ L+DGFC  G + +A  LF +M+S   K + V YNILI+
Sbjct: 239 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
             CK++ ++EA  L+ E+  +G++P +  +      LFEI +   AL++
Sbjct: 299 AMCKSRNLKEARKLFSELFVQGLQPNMKHWK-----LFEIWKRMAALRM 342



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 176/318 (55%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDV TY ++I+GLC   +   A  LF +M + G QP VVT++ I+D LCK+R+++EA  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M  +G+ PN  TYN+L+ G C   +   A  +   M S+    + V++++LIN +C
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   V EA  + + M   G++P VVTY++L  G     +V  A KLFD M   G   D  
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y   I+G CK   I EA +LF  +       DI +YN LIDGLC+ GRL+ A +LF ++
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                +P++ TY+I++ G C  G + KA  LF  M+     P+++ +++LI    +    
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 306

Query: 539 SKVNELLHKMKEKKVMPD 556
            +  +L  ++  + + P+
Sbjct: 307 KEARKLFSELFVQGLQPN 324



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 168/308 (54%), Gaps = 8/308 (2%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ +G QP V T+  I++ LCK  +   A+ L   M + G +P+  TY+T++D  C   +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +N A ++F  M++ G   +  +YN LI G C      EA ++  EM+S  I P +VT+ +
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF-S 119

Query: 388 LFLGLF----EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           L + +F     + +    LK   EM   GV  +  TY++ ++G      + EA +LF  +
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEM---GVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C+ D+ +YN LI+G CK+ R+  A +LF  + H  L P++V+YN +I GLC  G++
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A DLF +M  N   PD+ T+ +L+ GF +    +K   L   M+   + P+  + +I+
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 564 VDLLVKNE 571
           +D + K+ 
Sbjct: 297 IDAMCKSR 304



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 145/278 (52%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV RG +P+  TY T+++G C +G+   A  LF  M   GC+ D V+Y+ +I+  CK++ 
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V EAL ++  M +KGI P + TYN+L  GL    +   A  + +EM    +  +  T++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I+  CK G + EA  + +T+  +  E ++  Y+ L++G      +  A +LF  +    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             P+V +YNI+I G C   ++ +A+ LF +M      PD+++++ LI G  ++    + +
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +L   M     +PD    SI++D   K     K+   F
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLF 278


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 164/491 (33%), Positives = 252/491 (51%), Gaps = 21/491 (4%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+YTYNILI  FC +G +  G   FG + R+   PN  T+N+LI       RI EA  L
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              + + G +PN+I+YN +INGLCR G    A  + EEM    G  G    P+ VTY+T+
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEVTYNTL 121

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ++G CKEG   +A  +  +M    ++P VVTY +LI+ +C A + N A   F +M  +G+
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P+  T+  ++D   +   ++EA R+L+ M + G  P+  TYN  + G C++ ++  A  
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +   M   G   D VSY+ +I+G+C+  E++ A  + +EMV KG+ P  VTY++L  GL 
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           E+ ++  A  L  EM   G+  D  TYTT I+  C  G + +A+ L   +       D  
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ---------------GLC 498
            Y+ LI+GL K  R + A  L   L +   VP+ VTY+ +I+               G C
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFC 421

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G M +A  +F  M E    P    ++++IHG  R     K   L  +M     +P   
Sbjct: 422 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 481

Query: 559 IVSIVVDLLVK 569
            V  ++  L K
Sbjct: 482 TVITLIKALFK 492



 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 140/409 (34%), Positives = 227/409 (55%), Gaps = 6/409 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++RS  +PN  T+N LI+G  +   + +    F +++  GC PNV+TYNTLI+  C+ G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A  L + M++         +PN ++Y+ II+GLC+EG + +A  +  +M  +   PD
Sbjct: 61  IDEAFGLLKSMSSKG------MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 114

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTYN+L++G C   ++++A  +  EM+  GV PSVVT+  +++ +CK R ++ A    D
Sbjct: 115 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 174

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M  RG+RPN  TY TL+DGF   G +N A  +   M   G     V+YN  I+G+C  +
Sbjct: 175 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 234

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +EEAL + +EMV KG+ P VV+Y+T+  G     +++ A ++  EM   GV+ D  TY+
Sbjct: 235 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 294

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + I GLC+   + EA +L + +  +    D   Y  LI+  C  G L  A  L   + H 
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 354

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
             +P+ VTY+++I GL    +  +A+ L   +    + P  +T+D LI 
Sbjct: 355 GFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 176/328 (53%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P+V TYN LI G C   +  +    F EM   G  P+VVT+N ++D  CK  ++DEA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL  M  +G++PN  +YN +++G C  G +  A E+   M   G   D+V+YN L+NGY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK     +AL ++ EMV  G+ P+VVTY  L   + +   +  A++ FD+M+  G+  + 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
           RTYTT IDG  + G + EA  +   +        +  YN  I G C   R++ A  +   
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L P+VV+Y+ +I G C  G++D+A  +  +M E   +PD +T+  LI G   +  
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVD 565
            ++  +L  +M +  + PD    + +++
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLIN 333



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 159/300 (53%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+   V P+V T+N+++   C   ++ +       M + G  PN  TYNTL+D +C MG+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I+ A  L  SM S G + + +SYN++ING C+   ++EA  +  EM  KG  P  VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  +      AL +  EM R+GV+    TYT  I+ +CK   +  A+E F  +RI  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              + + Y  LIDG  + G L  A+ +   +      P+VVTYN  I G C   +M++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +  +M E   APDV+++  +I GF R  E  +  ++  +M EK V PDA   S ++  L
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 175/583 (30%), Positives = 288/583 (49%), Gaps = 40/583 (6%)

Query: 36  TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNA 89
           T   G  N     +A  +F  M R     P V ++N+++ +L K +  D       ++  
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            G  P+  TY+ +I+ +  +GR+      F  + +    PN  T NS +  L    R  E
Sbjct: 329 DGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKE 388

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG------------- 195
           AA  F  + A G +P++ +Y TL++G    G     + LF  M +NG             
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIH 448

Query: 196 -NGEIGVV--------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
              + G+V                P+ VTYST+I    + G +  A   F QM    I P
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQP 508

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRL 299
           +   Y+S+I G C      +AK L  EM+++G+ +P +V F+ +++ LCK+ ++ +A  +
Sbjct: 509 NTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDI 568

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            DL    G RP   T+N+L+DG+CL+GK+++A ++  +ME +G + D V+YN L++GY K
Sbjct: 569 FDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFK 628

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N  + + L+L+REM  KG+KP  VTY  +  GLF   +   A K F EM   G       
Sbjct: 629 NGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + GLC+N    EA+ LF+ L  +  +  I   N +I+ + K  R + A ELF ++ 
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              L+PN  TY +MI  L  DG ++ A ++F  ME++   P     + +I   +   E +
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIA 808

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLV---KNEISLKSLPS 579
           K    L K+  K+++ +AS  S+++ L     K +  +K LP+
Sbjct: 809 KAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPA 851



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 179/591 (30%), Positives = 288/591 (48%), Gaps = 55/591 (9%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-----YDTRLNATGLF---- 93
             ++ ++A  +FD + R   +P P  S N  LA+LA+         D    A  LF    
Sbjct: 86  GTLSRDDAHHMFDELFR-QATPVPGRSLNGFLAALARATSSSACITDGPALALALFNRVC 144

Query: 94  ----------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
                     P   TYNIL++C C+  R  LG   FG ILR+    +  T N+L+K L  
Sbjct: 145 REEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCY 204

Query: 144 ESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN-------- 194
            +R  EA   L  ++   GC PN ++Y+ ++  LC    +  AL+L + MA         
Sbjct: 205 ANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPD 264

Query: 195 ------------GNGEIGVVC-----------KPNTVTYSTIIDGLCKEGFVDKAKALFL 231
                         GE G  C           KP+ VTY+ IID LCK   +DKA+ +  
Sbjct: 265 VVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM  +   PD VTY+ +IHG        EA ++F EM  +G+ P++VT N  +  LCK+ 
Sbjct: 325 QMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHG 384

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +  EA+   D M  +G +P+  +Y TL+ G+   G       LF SM+S G   +   + 
Sbjct: 385 RSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           ILI+ Y K   V++A+ ++ EM  +G+ P VVTY+T+      + ++  A++ F++M   
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC--ELDIQAYNCLIDGLCKSGRLK 469
           G+  +T  Y++ I G C +G +++A EL   + I K     DI  ++ +I+ LCK GR+ 
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM-INKGIPRPDIVFFSSVINSLCKDGRVM 563

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A ++F         P V+T+N +I G C  G+MDKA  +   ME     PD++T++ L+
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            G+ +    +    L  +M+ K V P+     I++  L +   ++ +   F
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKF 674



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 97/248 (39%), Gaps = 29/248 (11%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P++ TYN L++ + K GR++ G   F  + R    PN  T+  ++ GL    R
Sbjct: 607 MEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-- 204
            + A   F ++   G    V  Y  ++ GLCR      A+ LF+++   N +  +     
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726

Query: 205 ---------------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                                      PN  TY  +I  L K+G V+ A  +F  M+   
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSG 786

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P     N +I  L    +  +A     ++  + +     T ++++    +  K  E  
Sbjct: 787 IVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDI 846

Query: 298 RLLDLMVQ 305
           +LL    Q
Sbjct: 847 KLLPAKYQ 854



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 74/195 (37%), Gaps = 33/195 (16%)

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  +FDE+ R       R+   F+  L +                        +  C+
Sbjct: 91  DDAHHMFDELFRQATPVPGRSLNGFLAALARA---------------------TSSSACI 129

Query: 459 IDGLCKSGRLKFAWELF---CSLPHG--VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            DG         A  LF   C    G  V VP   TYNI++   C   + D    LF  +
Sbjct: 130 TDGPA------LALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCI 183

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSK-VNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
                  D IT + L+      N   + VN LLH+M E   +P+A   SIV+  L  N +
Sbjct: 184 LRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSM 243

Query: 573 SLKSLPSFLVQERQG 587
           S ++L    +  +QG
Sbjct: 244 SQRALDLLQMMAKQG 258


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 161/521 (30%), Positives = 266/521 (51%), Gaps = 21/521 (4%)

Query: 65  PPVSSFNILLASLAK----NKHYDT---RLNATGLFPNLYTYNILINCFCKIGRVSLGF- 116
           P   ++N+++  L K    +K Y+      +   + P+L TY+ +IN FCK G +     
Sbjct: 39  PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 98

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           I    + R    P+  T+ S++ GL  + ++  A  +  ++K  G EP+  T++ LI G 
Sbjct: 99  ILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 158

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C       AL L++E+   +       KP+ VTY+ +IDG CK G ++KA  +   M+  
Sbjct: 159 CNARKVDEALKLYKEILTSSSW-----KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGR 213

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              P+VVTY+SL+HGLC A D ++A  LF  M  +G  P+VVT+  ++  LC   K+D A
Sbjct: 214 KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAA 273

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L+D M      P+  +YN L+DG+C +G+I  A++LF  M +  C  D ++Y  L+ G
Sbjct: 274 RLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG 333

Query: 357 YCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           +C    +EEA  L   M  + GI P VVTY+ +  G     +   A +   EM    VA 
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TY++ IDGLCK G +  A+E+ + +   + E  +  +N +I  LC+ G +  AW+L 
Sbjct: 394 NAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 453

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI-------TFDML 528
            ++    L P +VTY  +++G    G+M+ A +LF  M + A              F  L
Sbjct: 454 VAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSAL 513

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           I G  +  E  K   ++ +++ ++  P       +VD L++
Sbjct: 514 IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 554



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 250/494 (50%), Gaps = 44/494 (8%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P + T+ I+I+ FCK  ++      F + +R    PN  T+N ++ GL       +A  +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEK-MREFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 154 FTKLK-AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
             +++      P+++TY+T+ING C+ G    A  +  EM   +G       P+ VTY++
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDG-----IAPDVVTYTS 118

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM-DQ 271
           ++DGLC++G +D+A  +  +MK + + PD  T+++LI G C+A   +EA +L+ E++   
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
             +P VVT+  ++D  CK+  +++A ++L +M  R   PN  TY++L+ G C  G +++A
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 332 EELFGSMESMG-----------------------------------CKHDDVSYNILING 356
            +LF  M S G                                   C  D VSYN L++G
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-DGVAA 415
           YC+   +EEA  L++EM +K   P  +TY  L  G     ++E A  L + M+   G+  
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  TY+  + G  +    +EA E  + +       +   Y+ LIDGLCK+GR+  A E+ 
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVL 418

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++ +  + P+V T+N +I  LC  G MD+A  L + M  +   P ++T+  L+ GF R 
Sbjct: 419 KNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 478

Query: 536 NEPSKVNELLHKMK 549
                  EL   M+
Sbjct: 479 GRMEIAYELFEVMR 492



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/440 (32%), Positives = 225/440 (51%), Gaps = 32/440 (7%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM--------ANGNGEIGVVCK--------- 204
           C+P V+T+  +I+G C+      AL  FE+M           N  +  +CK         
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHG 251
                       P+ VTYST+I+G CK+G +D+A  +  +M   + I PDVVTY S++ G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRP 310
           LC     + A  +  EM  +GV+P   TF+ ++   C  RK+DEA +L  +++     +P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  TY  L+DGFC  G + +A ++ G ME   C  + V+Y+ L++G CK  ++++AL L+
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           R M SKG  P VVTY TL  GL   H+V+ A  L DEM       DT +Y   +DG C+ 
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV-PNVVT 489
           G I EA +LF+ +    C  D   Y CL+ G C + RL+ A  L  ++     + P+VVT
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y+I++ G     +  +A +   +M     AP+ +T+  LI G  +        E+L  M 
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422

Query: 550 EKKVMPDASIVSIVVDLLVK 569
            K+V P     + V+  L +
Sbjct: 423 NKRVEPSVGTFNSVIGALCR 442



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/407 (31%), Positives = 220/407 (54%), Gaps = 16/407 (3%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K Y   L ++   P++ TY  LI+ FCK G +       G +      PN  T++SL+ G
Sbjct: 169 KLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHG 228

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L     + +A  LF ++ + GC PNV+TY TLI+GLC       A  L +EM        
Sbjct: 229 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT------A 282

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C P+TV+Y+ ++DG C+ G +++AK LF +M  ++  PD +TY  L+ G C+A+   E
Sbjct: 283 TCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEE 342

Query: 261 AKRLFIEMMD--QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           A R  +E M    G+ P VVT+++++    + ++  EA+  +  M+ R V PNA TY++L
Sbjct: 343 A-RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 401

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +DG C  G+++ A E+  +M +   +    ++N +I   C+  +++EA  L   M + G+
Sbjct: 402 IDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 461

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT-------RTYTTFIDGLCKNG 431
           +P +VTY TL  G     ++E A +LF+ M++    + +       + ++  I GLCK  
Sbjct: 462 EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAR 521

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            I +A+ +   LR  +CE   +    ++DGL ++GR + A +L  S+
Sbjct: 522 EIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 144/327 (44%), Gaps = 55/327 (16%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L      D        + AT   P+  +YN L++ +C++GR+      
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK-AFGCEPNVITYNTLINGLC 177
           F  +      P+  T+  L++G    SR+ EA  L   +K A G +P+V+TY+ ++ G  
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 371

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R    + A    +EM   N        PN VTYS++IDGLCK G VD A  +   M ++ 
Sbjct: 372 RAKRFVEAAEFIQEMIARN------VAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR 425

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE----------- 286
           + P V T+NS+I  LC   D +EA +L + M   G++P +VT+  +++            
Sbjct: 426 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 485

Query: 287 -------------------------------LCKNRKMDEASRLLDLMVQRGVRPNACTY 315
                                          LCK R++D+A  +++ +  R   P     
Sbjct: 486 ELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 545

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMG 342
             ++DG    G+   A +L  S+  +G
Sbjct: 546 LAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 134/297 (45%), Gaps = 72/297 (24%)

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLY---REMVS---------------------- 375
           M C+   V++ I+I+G+CK  ++++AL+ +   RE V+                      
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 376 ----------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTTFI 424
                     K + P +VTY+T+  G  +  +++ A ++  EM  RDG+A D  TYT+ +
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 425 DGLCKNGYIIEAVELFRTLRILKCE----------------------------------- 449
           DGLC++G +  A E+ R +++   E                                   
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 450 -LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D+  Y  LIDG CKSG L+ A ++   +     VPNVVTY+ ++ GLC  G +D+A D
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           LF  M      P+V+T+  LIHG    ++      L+ +M      PD    + ++D
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 162/489 (33%), Positives = 258/489 (52%), Gaps = 12/489 (2%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           + +D      G   ++++YN L++   K G        +  +L S  +PN  TF  LI+G
Sbjct: 12  QFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRG 71

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
                + M A      L  F   P+V  +N LI+GL + G+   A+ LFE M +      
Sbjct: 72  NCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR---- 127

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM--KDENINPDVVTYNSLIHGLCHANDW 258
              KP  VTY+T+I GLCK G ++KA+ L  +M  K     PD+VTYN+LI+    A+  
Sbjct: 128 --VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRI 185

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
            EA     +M   G+ P V+T N+++  +CK+  ++EA  +LD M   G  P+  TYN++
Sbjct: 186 REACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSI 245

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C+ GK+  A E+   +++M C  D V++N L++G+CK   +  AL +  EM  + I
Sbjct: 246 IHALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 302

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P V+TY  L  GL  + QV+ A  L +E+ R G   D   YT+ +DGLCK+G I EA +
Sbjct: 303 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L + + +  C   +  Y+ L+ G C++G +  A E+   +    +VP + TYNI++ GL 
Sbjct: 363 LVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLI 422

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP-DA 557
            DG + KA  L  D+      PDV+T++ LI G  + N   +  +L  +M  +   P D 
Sbjct: 423 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDV 482

Query: 558 SIVSIVVDL 566
           ++ S+V  L
Sbjct: 483 TLGSVVFGL 491



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 171/532 (32%), Positives = 267/532 (50%), Gaps = 15/532 (2%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYN 100
           P+ A   FD+          V S+N LL  L K+ H+         L  +G  PNL T+ 
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFK 66

Query: 101 ILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ILI   CK G+ ++  + F R L      P+   FN LI GL  +    +A  LF  +++
Sbjct: 67  ILIRGNCKAGQ-AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMES 125

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
              +P ++TYNT+I+GLC++G+   A  L EEM    G+      P+ VTY+T+I+   +
Sbjct: 126 SRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGK----SAPDIVTYNTLINAFYR 181

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              + +A A   +MK   INPDV+T N L+ G+C   D  EA  +   M   G  P V+T
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N I+  LC   K+ EA+ +L  M      P+  T+NTL+DGFC  G + RA E+   M 
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 298

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
                 D ++Y IL+NG C+  +V+ A  L  E+V +G  P V+ Y +L  GL +  ++E
Sbjct: 299 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIE 358

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A KL  EM   G       Y++ + G C+ G + +A E+   +  +     +  YN ++
Sbjct: 359 EAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVL 418

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            GL K G +  A  L   L     VP+VVTYN +I GLC   ++ +A DL  +M      
Sbjct: 419 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCF 478

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           P+ +T   ++ G  R+        L+ +M  K+  P+  + + ++D L K++
Sbjct: 479 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 530



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 255/516 (49%), Gaps = 17/516 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  FN+L+  L K+ + D        + ++ + P + TYN +I+  CK G +      
Sbjct: 95  PDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAREL 154

Query: 119 FGRILRSC--FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
              ++R      P+  T+N+LI   +  SRI EA A   K+KA G  P+V+T N L++G+
Sbjct: 155 LEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGI 214

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+ G    AL    E+ +G    G V  P+ +TY++II  LC  G V +A  +   M   
Sbjct: 215 CKDGDVEEAL----EILDGMKLAGPV--PDVITYNSIIHALCVAGKVVEAAEILKTM--- 265

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           + +PD+VT+N+L+ G C A     A  +  EM  + + P V+T+ ++++ LC+  ++  A
Sbjct: 266 SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVA 325

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             LL+ +V++G  P+   Y +L+DG C  G+I  A +L   M   GC+   V Y+ L++G
Sbjct: 326 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSG 385

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           YC+   V +A  +  EMVS  + P + TYN +  GL +   +  A+ L  ++   G   D
Sbjct: 386 YCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 445

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY T IDGLCK   + EA +L   +    C  +      ++ GLC+ GR+  AW L  
Sbjct: 446 VVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVV 505

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +      PNVV Y  +I GLC   +MD A  +   M     A D   +  LI       
Sbjct: 506 EMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGG 565

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
             ++   +  +M  +  +PD S    + +  + N +
Sbjct: 566 RVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSV 601



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 166/323 (51%), Gaps = 9/323 (2%)

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G +  V ++N ++D L K+       ++   ++  G  PN  T+  L+ G C  G+  R
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E   +++      D   +N+LI+G  K+   ++A+ L+  M S  +KP +VTYNT+  
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140

Query: 391 GLFEIHQVEHALKLFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
           GL +   +E A +L +EM R G   A D  TY T I+   +   I EA      ++    
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D+   N L+ G+CK G ++ A E+   +     VP+V+TYN +I  LC  G++ +A +
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +   M   + +PD++TF+ L+ GF +     +  E+L +M  + ++PD    +I+V+ L 
Sbjct: 261 ILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 317

Query: 569 KNEISLKSLPSFLVQE--RQGEV 589
           +  +    +  +L++E  RQG +
Sbjct: 318 R--VGQVQVAFYLLEEIVRQGYI 338



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 70/367 (19%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIG 110
           +L+     P + +FN LL    K       L          + P++ TY IL+N  C++G
Sbjct: 261 ILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           +V + F     I+R  + P+   + SL+ GL     I EA  L  ++   GC   V+ Y+
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380

Query: 171 TLINGLCRTGHT---------MIALNLFEEMANGNGEIGVVCK----------------- 204
           +L++G CR G+          M+++N+   +   N  +G + K                 
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 440

Query: 205 ---PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              P+ VTY+T+IDGLCK   V +A  L  +M      P+ VT  S++ GLC     ++A
Sbjct: 441 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDA 500

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             L +EM  +   P+VV +  ++D LCK+ +MD+A  +LD M  +GV          +D 
Sbjct: 501 WSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGV---------ALDD 551

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F                          +Y  LI        V EA+++Y EMV++G  P 
Sbjct: 552 F--------------------------AYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585

Query: 382 VVTYNTL 388
             T  TL
Sbjct: 586 GSTSKTL 592


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/505 (32%), Positives = 259/505 (51%), Gaps = 12/505 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           +R   + P   S N LL  L+K+      + +   +   G+ P+++TYN++I+  CK G 
Sbjct: 245 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 304

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +      F ++     +P+  T+NSLI G      + E A+LF ++K  GC P++ITYN 
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LIN  C+      A   F EM N NG      KPN VTYST+ID  CKEG +  A  LF+
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLFV 418

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M+   + P+  TY SLI   C A +  EA +L  +M+  GV+ ++VT+  ++D LCK  
Sbjct: 419 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 478

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +M EA  +   M++ G+ PN   Y  L+ G+    ++  A ++   M     K D + Y 
Sbjct: 479 RMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYG 538

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I G+C  +++EE   +  EM S+GI    V   T+    F+  +   AL  F EMQ  
Sbjct: 539 SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDV 598

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV A   TY   IDGLCK G +  AV+ F  +  L  + ++  Y  LIDGLCK+  ++ A
Sbjct: 599 GVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESA 658

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +LF  +    + P++  +  +I G    G + +A  L   M E A   D+  +  L+ G
Sbjct: 659 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 718

Query: 532 FIRINEPSKVNELLHKMKEKKVMPD 556
           F +  E  +  +  ++M EK ++P+
Sbjct: 719 FSQCGELHQARKFFNEMIEKGILPE 743



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 250/480 (52%), Gaps = 6/480 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +R+      P   + N L++   K G   L    F  ++ +   P+  T+N +I  L  E
Sbjct: 243 SRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKE 302

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
             +  +  LF +++  G  P+V+TYN+LI+G  + G      +LF EM +      V C 
Sbjct: 303 GDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD------VGCV 356

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ +TY+ +I+  CK   + +A   F +MK+  + P+VVTY++LI   C       A +L
Sbjct: 357 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 416

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F++M   G+ P+  T+  ++D  CK   + EA +LL+ M+Q GV+ N  TY  L+DG C 
Sbjct: 417 FVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 476

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G++  AEE+F SM   G   +   Y  L++GY K + +E+A+ + ++M    IKP ++ 
Sbjct: 477 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 536

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y ++  G     ++E    + +EM+  G++A+    TT ID   K G   +A+  F+ ++
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +  E  I  Y  LIDGLCK+G ++ A + FC +    L PNV  Y  +I GLC +  ++
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIE 656

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+ LF +M+     PD+  F  LI G ++     +   L+ +M E  +  D  + + +V
Sbjct: 657 SAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 716



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 244/487 (50%), Gaps = 16/487 (3%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL-----LASLAKNKHYDTRLN 88
           D   +EGD+       +  +F  M  M  SP  V+  +++     + SL +       + 
Sbjct: 297 DYLCKEGDLE-----NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 351

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G  P++ TYN LINC+CK  ++   F  F  +  +   PN  T+++LI     E  + 
Sbjct: 352 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 411

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  LF  ++  G  PN  TY +LI+  C+ G+   A  L  +M       GV  K N V
Sbjct: 412 GAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIV 465

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ ++DGLCK G + +A+ +F  M  + I+P+   Y +L+HG   A    +A ++  +M
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +  ++P ++ +  I+   C  RK++E   +L+ M  RG+  N     T++D +   GK 
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A   F  M+ +G +   V+Y +LI+G CK   VE A+  +  M+S G++P V  Y +L
Sbjct: 586 SDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSL 645

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL + + +E A KLFDEMQ  G+  D   +T  IDG  K+G + EA+ L   +  L  
Sbjct: 646 IDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 705

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           E D+  Y  L+ G  + G L  A + F  +    ++P  V    +++     GQ+D+A +
Sbjct: 706 EFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIE 765

Query: 509 LFLDMEE 515
           L  +ME 
Sbjct: 766 LKNEMER 772



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 203/385 (52%), Gaps = 2/385 (0%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +C   +  +  +     + G +++A   F +M++    P   + N L+H L  + +    
Sbjct: 214 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 273

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           ++ F +M+  G+ PSV T+NV++D LCK   ++ + RL   M + G+ P+  TYN+L+DG
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G +     LF  M+ +GC  D ++YN LIN YCK +++  A   + EM + G+KP 
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTY+TL     +   ++ A+KLF +M+R G+  +  TYT+ ID  CK G + EA +L  
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     +L+I  Y  L+DGLCK+GR+  A E+F S+    + PN   Y  ++ G     
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           +M+ A  +   M E    PD+I +  +I G     +  +   +L +MK + +  +  I +
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 573

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQ 586
            ++D   K   S  +L  F  QE Q
Sbjct: 574 TIIDAYFKAGKSSDALNFF--QEMQ 596



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 222/468 (47%), Gaps = 6/468 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +++L + F ++G +      F R+      P A + N L+  L            F  +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+V TYN +I+ LC+ G    +  LF +M     E+G+   P+ VTY+++IDG 
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR----EMGL--SPDVVTYNSLIDGY 334

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            K G +++  +LF +MKD    PD++TYN LI+  C       A   F EM + G++P+V
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT++ ++D  CK   M  A +L   M + G+ PN  TY +L+D  C  G +  A +L   
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G K + V+Y  L++G CK   + EA  ++R M+  GI P    Y  L  G  +  +
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A+K+  +M    +  D   Y + I G C    + E   +   ++      +      
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +ID   K+G+   A   F  +    +   +VTY ++I GLC  G ++ A D F  M    
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             P+V  +  LI G  + N      +L  +M+ + + PD +  + ++D
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALID 682



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 93/204 (45%)

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            ++ LF    E+  +E A + F  M+        R+    +  L K+G      + F  +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                   +  YN +ID LCK G L+ +  LF  +    L P+VVTYN +I G    G +
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           ++   LF +M++    PD+IT++ LI+ + +  +  +  E   +MK   + P+    S +
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 564 VDLLVKNEISLKSLPSFLVQERQG 587
           +D   K  +   ++  F+   R G
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTG 424


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/492 (33%), Positives = 249/492 (50%), Gaps = 23/492 (4%)

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++  L+  L K K  +       ++ + G  P++YTY  +I+  C   R+         +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                TPN  T+  LI GL    R+ EA AL +K++   C P  +TYN+LI+GLC+    
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A +L EEM          C P+  TY+T+I G CK    D A  +F Q+      PDV
Sbjct: 132 SEAYDLLEEMVYSG------CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VTY+ LI GLC      EA  LF  M+  G   P+ VT+N ++   C+  KMDEA  LL+
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M + G  P+  TY TLM+GFC + +++ A +L   M   G   D V++  L++G C+  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK-LFDEMQRDGVAADTRTY 420
            + +A+ +  EM  K   PTV TYNT+  G    +Q+E A K + +EM       +  ++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSF 362

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LP 479
              I GLCK     EA+EL    R  +C  D+  Y  +IDGLC+  ++  A  ++   L 
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
               +PN +TY+ +I GLCN G +D+AR       E    P++ T+++LI  F + N   
Sbjct: 423 EPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDE 478

Query: 540 KVNELLHKMKEK 551
              ELL  M ++
Sbjct: 479 DARELLDDMVQR 490



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/457 (34%), Positives = 245/457 (53%), Gaps = 21/457 (4%)

Query: 65  PPVSSFNILLASL-AKNKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  ++ +L  +N+ ++ R     +    L PN+ TY +LI+  CK GRV      
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++ + C  P A T+NSLI GL    R  EA  L  ++   GC P++ TY TLI G C+
Sbjct: 104 LSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDEN 237
           +  +  AL +FE++      +    +P+ VTYS +IDGLCKEG + +A  LF +M K  +
Sbjct: 163 SKKSDDALRVFEQL------VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS 216

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+ VTYNSLI G C     +EA  L   M + G  P VVT+  +M+  CK  ++D+A 
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL+ M ++G+ P+  T+ +LMDG C   +++ A  + G M    C     +YN +++GY
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+  ++EEA     E +     P VV++N +  GL ++++   A++L +E +R     D 
Sbjct: 337 CRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRT-LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             YTT IDGLC+   + EA  ++R  L    C  +   Y+ LI GLC +G L  A     
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGY-- 452

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +  G  VPN+ TYN++I       + + AR+L  DM
Sbjct: 453 -IEKGC-VPNIGTYNLLIDAFRKANRDEDARELLDDM 487



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 216/411 (52%), Gaps = 10/411 (2%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  + +TY +LI GLC+      AL    +M +          P+  TY+ +I  LC E 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------PDVYTYTAVIHALCVEN 60

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A+    +M + N+ P+VVTY  LI GLC     +EA  L  +M  + V P+ VT+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  LCK  +  EA  LL+ MV  G  P+  TY TL+ GFC   K + A  +F  + + 
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEH 400
           G + D V+Y+ LI+G CK   ++EA+ L+  M+  G   P  VTYN+L  G   + +++ 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A+ L + M   G + D  TYTT ++G CK   + +A +L   +       D+  +  L+D
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLC+  RL  A  +   +      P V TYN ++ G C   Q+++AR   L  EE    P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML--EEMDCPP 357

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +V++F+++I G  ++N  S+  EL+ + + ++  PD  + + V+D L + +
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 195/387 (50%), Gaps = 47/387 (12%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L++ L K    ++ YD    +  +G  P+++TY  LI  FCK  +       
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLC 177
           F +++   F P+  T++ LI GL  E R+ EA  LF ++ K+  C PN +TYN+LI+G C
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R G    A+NL E MA    E G    P+ VTY+T+++G CK   +D A  L  QM  + 
Sbjct: 233 RMGKMDEAMNLLERMA----ETGS--SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PDVVT+ SL+ GLC  N  ++A  +  EM  +   P+V T+N I+D  C+  +++EA 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           + +  + +    PN  ++N ++ G C + + + A EL        C  D V Y  +I+G 
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 358 CKNKEVEEALSLYREM--------------------------------VSKGIKPTVVTY 385
           C+ K+V+EA  +YR+M                                + KG  P + TY
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTY 464

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDG 412
           N L     + ++ E A +L D+M + G
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 150/302 (49%), Gaps = 21/302 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  +F  M++     P   ++N L++   +    D       R+  TG  P++ TY  L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N FCK+ R+   +    ++ R   TP+  TF SL+ GL  E+R+ +A  +  +++   C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 163 EPNVITYNTLINGLCRTGHTMIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            P V TYNT+++G CR      A   + EEM          C PN V+++ +I GLCK  
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD---------CPPNVVSFNIMIRGLCKVN 373

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTF 280
              +A  L  + +    NPDVV Y ++I GLC     +EA R++ +M+++ G  P+ +T+
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++  LC    +D A       +++G  PN  TYN L+D F    +   A EL   M  
Sbjct: 434 STLITGLCNAGMLDRARGY----IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 341 MG 342
            G
Sbjct: 490 RG 491


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 183/558 (32%), Positives = 289/558 (51%), Gaps = 29/558 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD---TRLNATGL------FPNLYT 98
            EA  + D +    PS     S+N +L +L +  H+D     L A  L       PN  +
Sbjct: 62  GEATSLLDAL----PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           Y +L+   C   R++   +   R +RS     +  T+ +LI+GL   + + +A  L  ++
Sbjct: 118 YTVLMRALCA-DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G EPNV+ Y++L+ G C++G       +F EM+    E G+  +P+ V Y+ +ID L
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS----EKGI--EPDVVMYTGLIDSL 230

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G   KA  +   M    + P+VVTYN LI+ +C      EA  +  +M ++GV P V
Sbjct: 231 CKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV 290

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRG---VRPNACTYNTLMDGFCLMGKINRAEEL 334
           VT+N ++  L    +MDEA  LL+ MV RG   V+PN  T+N+++ G C +G++ +A ++
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ME  GC  + V+YN+LI G  +  +V +A+ L  EM S G++P   TY+ L  G  +
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           + QV+ A  L   M+  G+  +   Y   +  +C+ G +  A  LF  +      LD+ A
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVA 468

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y+ +I G CK+G LK A EL  S+    L P+ VTY+I+I      G M+ A  +   M 
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV-VDLLVKNEIS 573
            +   PDV  FD LI G+    E +KV EL+ +M  K +  D+ I+S +   L+  NE  
Sbjct: 529 ASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGK 588

Query: 574 --LKSLPSFLVQERQGEV 589
             L+SLP F  +  +G +
Sbjct: 589 ALLQSLPDFSAEISKGNI 606



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 39/461 (8%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R++      + L A     + ++YNT++  LCR GH   A  L   M+    E    C+P
Sbjct: 57  RLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRP 113

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V+Y+ ++  LC +   D+A  L   M+   +  DVVTY +LI GLC A + ++A  L 
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM + G++P+VV ++ ++   CK+ + ++  ++   M ++G+ P+   Y  L+D  C +
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK  +A  +   M   G + + V+YN+LIN  CK   V+EA+ + ++M  KG+ P VVTY
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           NTL  GL ++ +++ A+ L +EM R    V  +  T+ + I GLC  G + +A ++   +
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C +++  YN LI GL +  +++ A EL   +    L P+  TY+I+I+G C   Q+
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413

Query: 504 DKARDLFLDMEENAAAP----------------------------------DVITFDMLI 529
           D+A DL   M +    P                                  DV+ +  +I
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMI 473

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           HG  +  +     ELL  + ++ + PDA   SIV+++  K+
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 148/282 (52%), Gaps = 11/282 (3%)

Query: 288 CKNRKM-----DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME--- 339
           C NR +      EA+ LLD +    VR +A +YNT++   C  G  +RA  L  +M    
Sbjct: 51  CLNRHLRLLPLGEATSLLDALPS--VR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEP 107

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
              C+ + VSY +L+   C ++  ++A+ L R M S G++  VVTY TL  GL +  +V+
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVD 167

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A++L  EM   G+  +   Y++ + G CK+G   +  ++F  +     E D+  Y  LI
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLI 227

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           D LCK G+ K A  +   +    L PNVVTYN++I  +C +G + +A  +   M E   A
Sbjct: 228 DSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVA 287

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           PDV+T++ LI G   + E  +   LL +M   K +   ++V+
Sbjct: 288 PDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVT 329


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 177/612 (28%), Positives = 283/612 (46%), Gaps = 90/612 (14%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +S + L  S     H        + +   G   N+Y  N+++  FC+ G+       
Sbjct: 75  PRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSL 134

Query: 119 FGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-CEPNVITYNTLING 175
           F ++ R+  C  P+  T+N+L+ G     R+ EA  LF  +K  G C PN++TY+ LI+ 
Sbjct: 135 FSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDC 194

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C++G     L L EEM           K +   YS++I   C EG ++  + LF +M  
Sbjct: 195 YCKSGEVGEGLGLLEEMEREG------LKADVFVYSSLISAFCGEGDIETGRELFDEMLR 248

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             ++P+VVTY+ L+ GL     W EA  +  +M  +GV+P VV + V+ D LCKN +  +
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGD 308

Query: 296 ASRLLDLMVQR-----------------------------------GVRPNACTYNTLMD 320
           A ++LDLMVQ+                                   G +P+A TYNTL+ 
Sbjct: 309 AIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLK 368

Query: 321 GFCLMGKINRAEELF-------------------------------------GSMESMGC 343
           G C  GKI+ A +L+                                      SM  MG 
Sbjct: 369 GLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGL 428

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + + V+YN LI GY   +++ EAL L++  V  G  P  +TY+ +  GL ++  +  A  
Sbjct: 429 QGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARG 488

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           LF +M+  G+      Y   +  LC+   + +A  LF+ +R +   +D+ ++N +IDG  
Sbjct: 489 LFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTL 548

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K+G +K A EL   +    LVP+ VT++I+I      G +D+A  L+  M      P V+
Sbjct: 549 KAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVV 608

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL---KSLPSF 580
            FD L+ G+    E  K+  LLH+M +K V+ D+ + S ++  L     +L   K LP F
Sbjct: 609 VFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKF 668

Query: 581 LVQERQGEVGES 592
             Q      G +
Sbjct: 669 SQQSEHTSKGTT 680



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 170/571 (29%), Positives = 280/571 (49%), Gaps = 57/571 (9%)

Query: 48  NEAFCIFDYMLRMHP-SPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYN 100
           ++A  +F   +   P SPP   + + L+ +L K + YD       ++ +  + P   + +
Sbjct: 22  SDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLS 81

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA- 159
            L   F      S  F     + +  F  N    N ++KG     +  +A +LF+++K  
Sbjct: 82  ALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141

Query: 160 FGC-EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           + C  P+ +TYNTL+NG C+      A  LFE M  G       C+PN VTYS +ID  C
Sbjct: 142 YDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGD-----CRPNLVTYSVLIDCYC 196

Query: 219 K-----------------------------------EGFVDKAKALFLQMKDENINPDVV 243
           K                                   EG ++  + LF +M    ++P+VV
Sbjct: 197 KSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVV 256

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY+ L+ GL     W EA  +  +M  +GV+P VV + V+ D LCKN +  +A ++LDLM
Sbjct: 257 TYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLM 316

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM---GCKHDDVSYNILINGYCKN 360
           VQ+G  P   TYN +++G C   K +R ++ FG +E M   G K D V+YN L+ G C  
Sbjct: 317 VQKGEEPGTLTYNVVVNGLC---KEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGA 373

Query: 361 KEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            ++ EA+ L++ ++S+   +KP V T N L  GL +  +V  A ++   M   G+  +  
Sbjct: 374 GKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIV 433

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I+G      +IEA++L++         +   Y+ +I+GLCK   L  A  LFC +
Sbjct: 434 TYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKM 493

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P V+ YN ++  LC +  +++AR LF +M       DV++F+++I G ++  + 
Sbjct: 494 KDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDV 553

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               ELL +M    ++PDA   SI+++   K
Sbjct: 554 KSAKELLSEMFMMDLVPDAVTFSILINRFSK 584


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 175/538 (32%), Positives = 276/538 (51%), Gaps = 39/538 (7%)

Query: 69  SFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           S N LL  LAK          Y   LN +G+ P+L T+N LIN   K G+V    +   +
Sbjct: 207 SCNTLLIQLAKFEMVEGARNLYKQMLN-SGIQPSLLTFNTLINILSKKGKVREAELILSQ 265

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           I +   +P+  T+ SLI G H  +R ++ A  +F ++   GC+PN +TY+TLINGLC  G
Sbjct: 266 IFQYDLSPDVFTYTSLILG-HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 324

Query: 181 HTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVTYS 211
               AL++ EEM     E  V                              C+PN  TY+
Sbjct: 325 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 384

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I GL + G ++ A  L+ +M  E + P+ VTYN+LI+ LC    ++ A ++F  M   
Sbjct: 385 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 444

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G   +  T+N I+  LC    +++A  L + M++ G  P   TYNTL++G+   G +N A
Sbjct: 445 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 504

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M+  GC+ D+ +YN L++G+ K  ++E A   ++EMV  G+ P  V+Y TL  G
Sbjct: 505 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDG 564

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  +V+ AL L + M+  G   +  +Y   I+GL K     EA ++   +       +
Sbjct: 565 HSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPN 624

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  LIDGLC++GR +FA+++F  +     +PN+ TY+ +I GLC +G+ D+A  L  
Sbjct: 625 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK 684

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +ME    APD +TF  LI GF+ +        LL +M +    P+    S+++  L K
Sbjct: 685 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 170/568 (29%), Positives = 276/568 (48%), Gaps = 53/568 (9%)

Query: 66  PVSSFNILLASLAKNKHYDTR-------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P     IL+    +N+    R       ++  G   +LY+ N L+    K   V      
Sbjct: 168 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 227

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           + ++L S   P+  TFN+LI  L  + ++ EA  + +++  +   P+V TY +LI G CR
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 287

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             +  +A  +F+ M          C PN+VTYST+I+GLC EG VD+A  +  +M ++ I
Sbjct: 288 NRNLDLAFGVFDRMVKEG------CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 341

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P V TY   I  LC      EA  L   M  +G +P+V T+  ++  L +  K++ A  
Sbjct: 342 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 401

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M++ G+ PN  TYN L++  C+ G+ + A ++F  ME  G   +  +YN +I G C
Sbjct: 402 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 461

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++E+A+ L+ +M+  G  PTVVTYNTL  G      V +A +L D M+ +G   D  
Sbjct: 462 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 521

Query: 419 T-----------------------------------YTTFIDGLCKNGYIIEAVELFRTL 443
           T                                   YTT IDG  K+G +  A+ L   +
Sbjct: 522 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM 581

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
             + C  ++++YN +I+GL K  R   A ++   +    L+PNV+TY  +I GLC +G+ 
Sbjct: 582 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRT 641

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSI 562
             A  +F DME+    P++ T+  LI+G  +  +  +   LL +M+ K + PD  +  S+
Sbjct: 642 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701

Query: 563 VVDLLVKNEISLKSLPSFLVQERQGEVG 590
           +   +V   I      +FL+  R  +VG
Sbjct: 702 IDGFVVLGRID----HAFLLLRRMVDVG 725



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/486 (33%), Positives = 241/486 (49%), Gaps = 17/486 (3%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           IF Y L      P V ++  L+    +N++ D       R+   G  PN  TY+ LIN  
Sbjct: 266 IFQYDL-----SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGL 320

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C  GRV         ++     P   T+   I  L A     EA  L  ++K  GC PNV
Sbjct: 321 CNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNV 380

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            TY  LI+GL R G   +A+ L+ +M       G+V  PNTVTY+ +I+ LC  G    A
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNALINELCVGGRFSTA 434

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +F  M+      +  TYN +I GLC   D  +A  LF +M+  G  P+VVT+N +++ 
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
                 ++ A+RLLDLM + G  P+  TYN L+ GF   GK+  A   F  M   G   +
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            VSY  LI+G+ K+ +V+ ALSL   M   G  P V +YN +  GL + ++   A K+ D
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   G+  +  TYTT IDGLC+NG    A ++F  +   KC  ++  Y+ LI GLC+ G
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +   A  L   +    L P+ VT+  +I G    G++D A  L   M +    P+  T+ 
Sbjct: 675 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYS 734

Query: 527 MLIHGF 532
           +L+ G 
Sbjct: 735 VLLKGL 740



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/544 (30%), Positives = 264/544 (48%), Gaps = 36/544 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+  L     + T L         G   N  TYN +I   C  G +    + 
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL 472

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++L+    P   T+N+LI G   +  +  AA L   +K  GCEP+  TYN L++G  +
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A   F+EM     E G+   PN V+Y+T+IDG  K+G VD A +L  +M++   
Sbjct: 533 WGKLESASFYFQEMV----ECGL--NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGC 586

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NP+V +YN++I+GL   N ++EA+++  +M +QG+ P+V+T+  ++D LC+N +   A +
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M +R   PN  TY++L+ G C  GK + AE L   ME  G   D+V++  LI+G+ 
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL--------------------FEIHQ- 397
               ++ A  L R MV  G KP   TY+ L  GL                    F  H+ 
Sbjct: 707 VLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766

Query: 398 ---VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
               E    L   M   G      TY+T + GLC+ G   EA +L + ++      D + 
Sbjct: 767 DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y  L+   CK+  +  A ++F S+       ++  Y  +I  LC  GQ+++A+ LF +M 
Sbjct: 827 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 886

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           E     D I + +L+ G ++  E     +LLH M+ K   P+     I+   L +   S+
Sbjct: 887 EKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSI 946

Query: 575 KSLP 578
           +S P
Sbjct: 947 ESEP 950



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 169/540 (31%), Positives = 249/540 (46%), Gaps = 37/540 (6%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILI 103
           AF +FD M++    P  V+ ++ L+  L      D  L+        G+ P +YTY + I
Sbjct: 294 AFGVFDRMVKEGCDPNSVT-YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 352

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
              C I           R+ +    PN  T+ +LI GL    ++  A  L+ K+   G  
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN +TYN LIN LC  G    AL +F  M  G+G +      NT TY+ II GLC  G +
Sbjct: 413 PNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDI 466

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           +KA  LF +M      P VVTYN+LI+G     + N A RL   M + G +P   T+N +
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 526

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +    K  K++ AS     MV+ G+ PN  +Y TL+DG    GK++ A  L   ME MGC
Sbjct: 527 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGC 586

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +  SYN +ING  K     EA  +  +M  +G+ P V+TY TL  GL    + + A K
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F +M++     +  TY++ I GLC+ G   EA  L + +       D   +  LIDG  
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL---C---------------------N 499
             GR+  A+ L   +      PN  TY+++++GL   C                      
Sbjct: 707 VLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           D   +   +L   M E    P + T+  L+ G  R     +  +L+  MKE+   PD  I
Sbjct: 767 DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 238/499 (47%), Gaps = 40/499 (8%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDTRL----NATGLFP 94
           GDI      +A  +F+ ML+M P P  V+   ++   L K N +   RL       G  P
Sbjct: 464 GDIE-----KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 518

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           + +TYN L++ F K G++      F  ++     PN  ++ +LI G   + ++  A +L 
Sbjct: 519 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLL 578

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            +++  GC PNV +YN +INGL +      A  + ++MA    E G++  PN +TY+T+I
Sbjct: 579 ERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA----EQGLL--PNVITYTTLI 632

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           DGLC+ G    A  +F  M+     P++ TY+SLI+GLC     +EA+ L  EM  +G+ 
Sbjct: 633 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 692

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF---CLM--GKIN 329
           P  VTF  ++D      ++D A  LL  MV  G +PN  TY+ L+ G    CL+   K+ 
Sbjct: 693 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVA 752

Query: 330 RAEE-------------------LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
              E                   L   M  +GC+    +Y+ L++G C+     EA  L 
Sbjct: 753 VQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 812

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           ++M  +G  P    Y +L +   +  +V+HALK+F  ++  G       Y   I  LCK 
Sbjct: 813 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 872

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G + EA  LF  +   +   D   +  L+DGL K G L    +L   +      PN+ TY
Sbjct: 873 GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 932

Query: 491 NIMIQGLCNDGQMDKARDL 509
            I+ + L   G+  ++  L
Sbjct: 933 VILGRELSRIGKSIESEPL 951



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 171/375 (45%), Gaps = 36/375 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+N ++  L+K   +        ++   GL PN+ TY  LI+  C+ GR    F  
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + +    PN  T++SLI GL  E +  EA  L  +++  G  P+ +T+ +LI+G   
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA---------- 228
            G    A  L   M      + V CKPN  TYS ++ GL KE  + + K           
Sbjct: 708 LGRIDHAFLLLRRM------VDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSF 761

Query: 229 --------------LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
                         L  +M +    P + TY++L+ GLC    + EA++L  +M ++G  
Sbjct: 762 SPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 821

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P    +  ++   CKN ++D A ++   +  +G + +   Y  L+   C  G++  A+ L
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 881

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F +M       D++ + +L++G  K  E++  + L   M SK   P + TY  L   L  
Sbjct: 882 FDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSR 941

Query: 395 IHQVEHALKLFDEMQ 409
           I +   +  L D+++
Sbjct: 942 IGKSIESEPLADKLK 956


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 169/541 (31%), Positives = 273/541 (50%), Gaps = 31/541 (5%)

Query: 42  INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-------RLNATGLFP 94
           +N+I  N+A  I + + + +   P V S+N +L ++ + K            +  +G+ P
Sbjct: 145 VNLI--NKALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+YTYNILI  FC  G + +G   FG + R+   PN  T+N++I       +I EA  L 
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +   G  PN+I+YN +INGLCR G       + EEM+           P+ VT++T+I
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR------YVPDRVTFNTLI 315

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G C  G   +A  L  +M    ++P+VVTY +LI+ +C A + N A     +M D+G+ 
Sbjct: 316 NGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLH 375

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  T+  ++D   +   + +A +++  MV+ G  P   TYN L++G C++G++  A  L
Sbjct: 376 PNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGL 435

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M   G   D VSY+ +I+G+C+N+E+E+A  L  EMV+KGI P V TY++L  GL +
Sbjct: 436 LQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK 495

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++     LF EM   G+  D  TYT+ I+  C  G + +A+ L   +       DI  
Sbjct: 496 QRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVT 555

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI---------------QGLCN 499
           YN LI+G  K  R K A  L   L +   VPN +TYN +I               +G C 
Sbjct: 556 YNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCM 615

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G M++A  +   M +     +   ++++IHG  ++    K   L  +M      P +  
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675

Query: 560 V 560
           +
Sbjct: 676 I 676



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 256/508 (50%), Gaps = 32/508 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT-----RLNA-TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++ +  K +         RL A  GL PNL +YN++IN  C+ G++      
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +  + P+  TFN+LI G        +A  L  ++   G  PNV+TY TLIN +C+
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A+   ++M +          PN  TY+T+IDG  ++GF+ +A  +  +M +   
Sbjct: 356 AGNLNRAMEFLDQMRDRG------LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P ++TYN+LI+G C      +A  L  EM+++G  P VV+++ I+   C+N+++++A +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   MV +G+ P+  TY++L+ G C   ++    +LF  M S+G   D+V+Y  LIN YC
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++++AL L+ EM+ KG  P +VTYN L  G  +  + + A +L  ++  +    +  
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T ID  C N                   L+ ++   L+ G C  G +  A  +  S+
Sbjct: 590 TYNTLIDN-CNN-------------------LEFKSALALMKGFCMKGLMNEADRVLESM 629

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  N   YN++I G    G ++KA +L+ +M  +  AP  +T   L        + 
Sbjct: 630 LQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE 689

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDL 566
            ++N+LL    +   + +A++  +++ +
Sbjct: 690 VELNQLLDYTLKSCRITEAALAKVLIGI 717



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 231/487 (47%), Gaps = 43/487 (8%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIME------------------AAALFTKLKAFGCE 163
           +L S FTP A++ N L+K     S +++                  A  + T+ K +   
Sbjct: 40  LLSSHFTPQASS-NLLLKSQFDSSLVLKFLDWARSQQFFSFQCKCLALHILTRYKLYKTA 98

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
            + +    ++N +  TG      +LF+ + N   +    CK ++  +  ++    +   +
Sbjct: 99  QS-LAEEVVVNTVDETGE-----DLFQCLKNSYYQ----CKSSSAVFDLVVKSCARVNLI 148

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE-AKRLFIEMMDQGVQPSVVTFNV 282
           +KA ++    K     P V++YN+++  +       + A+ +F EM++ GV P+V T+N+
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++   C    ++        M + G  PN  TYNT++D +C + KI  A +L   M   G
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + +SYN++ING C+  +++E   +  EM  +   P  VT+NTL  G   +     AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L  EM ++G++ +  TYTT I+ +CK G +  A+E    +R      + + Y  LIDG 
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            + G LK A+++   +      P ++TYN +I G C  G+M+ A  L  +M E    PDV
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +++  +I GF R  E  K  +L  +M  K + PD +  S ++  L K             
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK------------- 495

Query: 583 QERQGEV 589
           Q R GEV
Sbjct: 496 QRRLGEV 502


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 164/492 (33%), Positives = 249/492 (50%), Gaps = 23/492 (4%)

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++  L+  L K K  +       ++ + G  P++YTY  +I+  C   R+         +
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                TPN  T+  LI GL    R+ EA AL +K++   C P  +TYN+LI+GLC+    
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERA 131

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A +L EEM          C P+  TY+T+I G CK    D A  +F Q+      PDV
Sbjct: 132 SEAYDLLEEMVYSG------CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VTY+ LI GLC      EA  LF  M+  G   P+ VT+N ++   C+  KMDEA  LL+
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M + G  P+  TY TLM+GFC + +++ A +L   M   G   D V++  L++G C+  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK-LFDEMQRDGVAADTRTY 420
            + +A+ +  EM  K   PTV TYNT+  G    +Q+E A K + +EM       +  ++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSF 362

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LP 479
              I GLCK     EA+EL    R  +C  D+  Y  +IDGLC+  ++  A  ++   L 
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
               +PN +TY+ ++ GLCN G +D+AR       E    P++ T+++LI  F + N   
Sbjct: 423 EPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDE 478

Query: 540 KVNELLHKMKEK 551
              ELL  M ++
Sbjct: 479 DARELLDDMVQR 490



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 216/411 (52%), Gaps = 10/411 (2%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  + +TY +LI GLC+      AL    +M +          P+  TY+ +I  LC E 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------PDVYTYTAVIHALCVEN 60

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A+    +M + N+ P+VVTY  LI GLC     +EA  L  +M  + V P+ VT+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  LCK  +  EA  LL+ MV  G  P+  TY TL+ GFC   K + A  +F  + + 
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEH 400
           G + D V+Y+ LI+G CK   ++EA+ L+  M+  G   P  VTYN+L  G   + +++ 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A+ L + M   G + D  TYTT ++G CK   + +A +L   +       D+  +  L+D
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLC+  RL  A  +   +      P V TYN ++ G C   Q+++AR   L  EE    P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML--EEMDCPP 357

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +V++F+++I G  ++N  S+  EL+ + + ++  PD  + + V+D L + +
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 223/448 (49%), Gaps = 44/448 (9%)

Query: 65  PPVSSFNILLASL-AKNKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  ++ +L  +N+ ++ R     +    L PN+ TY +LI+  CK GRV      
Sbjct: 44  PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVAL 103

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++ + C  P A T+NSLI GL    R  EA  L  ++   GC P++ TY TLI G C+
Sbjct: 104 LSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162

Query: 179 TGHTMIALNLFEEMANGNGEIGVV------------------------------CKPNTV 208
           +  +  AL +FE++        VV                              C PNTV
Sbjct: 163 SKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 222

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+++I G C+ G +D+A  L  +M +   +PDVVTY +L++G C     ++A  L  +M
Sbjct: 223 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G+ P VVTF  +MD LC+  ++ +A  +L  M ++   P   TYNT++DG+C   ++
Sbjct: 283 TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQL 342

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A +    +E M C  + VS+NI+I G CK     EA+ L  E   +   P VV Y T+
Sbjct: 343 EEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400

Query: 389 FLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
             GL    +V+ A +++ +M +  G   ++ TY+T + GLC  G +  A    R      
Sbjct: 401 IDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKG 456

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELF 475
           C  +I  YN LID   K+ R + A EL 
Sbjct: 457 CVPNIGTYNLLIDAFRKANRDEDARELL 484



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 195/387 (50%), Gaps = 47/387 (12%)

Query: 65  PPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L++ L K    ++ YD    +  +G  P+++TY  LI  FCK  +       
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 172

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLC 177
           F +++   F P+  T++ LI GL  E R+ EA  LF ++ K+  C PN +TYN+LI+G C
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 232

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R G    A+NL E MA    E G    P+ VTY+T+++G CK   +D A  L  QM  + 
Sbjct: 233 RMGKMDEAMNLLERMA----ETGS--SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PDVVT+ SL+ GLC  N  ++A  +  EM  +   P+V T+N I+D  C+  +++EA 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           + +  + +    PN  ++N ++ G C + + + A EL        C  D V Y  +I+G 
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 358 CKNKEVEEALSLYREM--------------------------------VSKGIKPTVVTY 385
           C+ K+V+EA  +YR+M                                + KG  P + TY
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTY 464

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDG 412
           N L     + ++ E A +L D+M + G
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 150/302 (49%), Gaps = 21/302 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  +F  M++     P   ++N L++   +    D       R+  TG  P++ TY  L
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N FCK+ R+   +    ++ R   TP+  TF SL+ GL  E+R+ +A  +  +++   C
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 163 EPNVITYNTLINGLCRTGHTMIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            P V TYNT+++G CR      A   + EEM          C PN V+++ +I GLCK  
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD---------CPPNVVSFNIMIRGLCKVN 373

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTF 280
              +A  L  + +    NPDVV Y ++I GLC     +EA R++ +M+++ G  P+ +T+
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++  LC    +D A       +++G  PN  TYN L+D F    +   A EL   M  
Sbjct: 434 STLVTGLCNAGMLDRARGY----IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 341 MG 342
            G
Sbjct: 490 RG 491


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 183/557 (32%), Positives = 289/557 (51%), Gaps = 29/557 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR---LNATGL------FPNLYTY 99
           EA  + D +    PS     S+N +L +L +  H+D     L A  L       PN  +Y
Sbjct: 63  EATSLLDAL----PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            +L+   C   R++   +   R +RS     +  T+ +LI+GL   + + +A  L  ++ 
Sbjct: 119 TVLMRALCA-DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G EPNV+ Y++L+ G C++G       +F EM+    E G+  +P+ V Y+ +ID LC
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMS----EKGI--EPDVVMYTGLIDSLC 231

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G   KA  +   M    + P+VVTYN LI+ +C      EA  +  +M ++GV P VV
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRG---VRPNACTYNTLMDGFCLMGKINRAEELF 335
           T+N ++  L    +MDEA  LL+ MV RG   V+PN  T+N+++ G C +G++ +A ++ 
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ME  GC  + V+YN+LI G  +  +V +A+ L  EM S G++P   TY+ L  G  ++
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            QV+ A  L   M+  G+  +   Y   +  +C+ G +  A  LF  +      LD+ AY
Sbjct: 411 WQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAY 469

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           + +I G CK+G LK A EL  S+    L P+ VTY+I+I      G M+ A  +   M  
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV-VDLLVKNEIS- 573
           +   PDV  FD LI G+    E +KV EL+ +M  K +  D+ I+S +   L+  NE   
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKA 589

Query: 574 -LKSLPSFLVQERQGEV 589
            L+SLP F  +  +G +
Sbjct: 590 LLQSLPDFSAEISKGNI 606



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 39/461 (8%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R++      + L A     + ++YNT++  LCR GH   A  L   M+    E    C+P
Sbjct: 57  RLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRP 113

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V+Y+ ++  LC +   D+A  L   M+   +  DVVTY +LI GLC A + ++A  L 
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM + G++P+VV ++ ++   CK+ + ++  ++   M ++G+ P+   Y  L+D  C +
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK  +A  +   M   G + + V+YN+LIN  CK   V+EA+ + ++M  KG+ P VVTY
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTY 293

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           NTL  GL ++ +++ A+ L +EM R    V  +  T+ + I GLC  G + +A ++   +
Sbjct: 294 NTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C +++  YN LI GL +  +++ A EL   +    L P+  TY+I+I+G C   Q+
Sbjct: 354 EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQV 413

Query: 504 DKARDLFLDMEENAAAP----------------------------------DVITFDMLI 529
           D+A DL   M +    P                                  DV+ +  +I
Sbjct: 414 DRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMI 473

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           HG  +  +     ELL  + ++ + PDA   SIV+++  K+
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 148/282 (52%), Gaps = 11/282 (3%)

Query: 288 CKNRKM-----DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME--- 339
           C NR +      EA+ LLD +    VR +A +YNT++   C  G  +RA  L  +M    
Sbjct: 51  CLNRHLRLLPLGEATSLLDALPS--VR-DAVSYNTVLTALCRRGHHDRAGALLRAMSLEP 107

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
              C+ + VSY +L+   C ++  ++A+ L R M S G++  VVTY TL  GL +  +V+
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVD 167

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A++L  EM   G+  +   Y++ + G CK+G   +  ++F  +     E D+  Y  LI
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLI 227

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           D LCK G+ K A  +   +    L PNVVTYN++I  +C +G + +A  +   M E   A
Sbjct: 228 DSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVA 287

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           PDV+T++ LI G   + E  +   LL +M   K +   ++V+
Sbjct: 288 PDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVT 329


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 169/541 (31%), Positives = 273/541 (50%), Gaps = 31/541 (5%)

Query: 42  INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-------RLNATGLFP 94
           +N+I  N+A  I + + + +   P V S+N +L ++ + K            +  +G+ P
Sbjct: 145 VNLI--NKALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+YTYNILI  FC  G + +G   FG + R+   PN  T+N++I       +I EA  L 
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +   G  PN+I+YN +INGLCR G       + EEM+           P+ VT++T+I
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR------YVPDRVTFNTLI 315

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G C  G   +A  L  +M    ++P+VVTY +LI+ +C A + N A     +M D+G+ 
Sbjct: 316 NGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLH 375

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  T+  ++D   +   + +A +++  MV+ G  P   TYN L++G C++G++  A  L
Sbjct: 376 PNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGL 435

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M   G   D VSY+ +I+G+C+N+E+E+A  L  EMV+KGI P V TY++L  GL +
Sbjct: 436 LQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK 495

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++     LF EM   G+  D  TYT+ I+  C  G + +A+ L   +       DI  
Sbjct: 496 QRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVT 555

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI---------------QGLCN 499
           YN LI+G  K  R K A  L   L +   VPN +TYN +I               +G C 
Sbjct: 556 YNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCM 615

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G M++A  +   M +     +   ++++IHG  ++    K   L  +M      P +  
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675

Query: 560 V 560
           +
Sbjct: 676 I 676



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 239/459 (52%), Gaps = 27/459 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDT-----RLNA-TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++ +  K +         RL A  GL PNL +YN++IN  C+ G++      
Sbjct: 236 PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEI 295

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +  + P+  TFN+LI G        +A  L  ++   G  PNV+TY TLIN +C+
Sbjct: 296 LEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCK 355

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A+   ++M +          PN  TY+T+IDG  ++GF+ +A  +  +M +   
Sbjct: 356 AGNLNRAMEFLDQMRDRG------LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P ++TYN+LI+G C      +A  L  EM+++G  P VV+++ I+   C+N+++++A +
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   MV +G+ P+  TY++L+ G C   ++    +LF  M S+G   D+V+Y  LIN YC
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYC 529

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++++AL L+ EM+ KG  P +VTYN L  G  +  + + A +L  ++  +    +  
Sbjct: 530 IEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEI 589

Query: 419 TYTTFID---------------GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           TY T ID               G C  G + EA  +  ++     +L+ + YN +I G  
Sbjct: 590 TYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHS 649

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           K G ++ A+ L+  + H    P+ VT   + + L ++G+
Sbjct: 650 KVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGK 688



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 231/487 (47%), Gaps = 43/487 (8%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIME------------------AAALFTKLKAFGCE 163
           +L S FTP A++ N L+K     S +++                  A  + T+ K +   
Sbjct: 40  LLSSHFTPQASS-NLLLKSQFDSSLVLKFLDWARSQQFFSFQCKCLALHILTRYKLYKTA 98

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
            + +    ++N +  TG      +LF+ + N   +    CK ++  +  ++    +   +
Sbjct: 99  QS-LAEEVVVNTVDETGE-----DLFQCLKNSYYQ----CKSSSAVFDLVVKSCARVNLI 148

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE-AKRLFIEMMDQGVQPSVVTFNV 282
           +KA ++    K     P V++YN+++  +       + A+ +F EM++ GV P+V T+N+
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++   C    ++        M + G  PN  TYNT++D +C + KI  A +L   M   G
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + +SYN++ING C+  +++E   +  EM  +   P  VT+NTL  G   +     AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L  EM ++G++ +  TYTT I+ +CK G +  A+E    +R      + + Y  LIDG 
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            + G LK A+++   +      P ++TYN +I G C  G+M+ A  L  +M E    PDV
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDV 448

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +++  +I GF R  E  K  +L  +M  K + PD +  S ++  L K             
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCK------------- 495

Query: 583 QERQGEV 589
           Q R GEV
Sbjct: 496 QRRLGEV 502


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 171/503 (33%), Positives = 256/503 (50%), Gaps = 8/503 (1%)

Query: 64  PPPVSSFNILLASLAKNKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           PP   + N +L  LA+N+      RL      PN++T+NI+I+  CK G +      F R
Sbjct: 166 PPNTRTCNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVR 225

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     +P+  T+NSLI G      + E   L ++++  GC  +V+TYN LIN   + G 
Sbjct: 226 MKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGR 285

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A + F EM       GVV   N VT+ST +D  CKEG V +A  LF QM+   + P+
Sbjct: 286 MEKAYSYFGEMKRQ----GVV--ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPN 339

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             TY SL+ G C A   ++A  L  EM+ QG+ P+VVT+ V++D LCK  K+ EA  +L 
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LM + GV+ N   Y TL+ G  +     RA +L   M++ G + D   Y  LI G CK++
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +V+EA SL  +M   G++P  V Y T+   LF+  +   A+ L  ++   G   +  TY 
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYC 519

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDGLCK G I EA+  F  +R L  + ++QAY  LIDG CK G L  A  L   +   
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +  + V Y  +I G      +  A  L   M E+    D+  +   I GF  +N   + 
Sbjct: 580 GMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEA 639

Query: 542 NELLHKMKEKKVMPDASIVSIVV 564
             +L +M    + PD ++ + ++
Sbjct: 640 RGVLSEMIGTGITPDKTVYNCLI 662



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 224/453 (49%), Gaps = 10/453 (2%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           A  R+ +    PN  T N ++  L A +R      L  +L      PNV T+N +I+ LC
Sbjct: 156 ALARVRQLRVPPNTRTCNHILLRL-ARNR---QGGLVRRLFDLLPVPNVFTFNIVIDFLC 211

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G  + A  LF  M        + C P+ VTY+++IDG  K G +++ + L  +M+   
Sbjct: 212 KEGELVEARALFVRMK------AMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
              DVVTYN+LI+         +A   F EM  QGV  +VVTF+  +D  CK   + EA 
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM 325

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L   M  RG+ PN  TY +L+DG C  G+++ A  L   M   G   + V+Y ++++G 
Sbjct: 326 KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL 385

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +V EA ++   M   G+K   + Y TL  G F  +  E AL L ++M+  G+  D 
Sbjct: 386 CKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDV 445

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y T I GLCK+  + EA  L   +       +   Y  ++D L K+G+   A  L   
Sbjct: 446 SLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHK 505

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      PNVVTY  +I GLC  G + +A   F  M E    P+V  +  LI GF +I  
Sbjct: 506 ILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGS 565

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +K   L+++M +K +  D  + + ++D  +K 
Sbjct: 566 LNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQ 598



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 179/335 (53%), Gaps = 12/335 (3%)

Query: 240 PDVV-TYNSLI--HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           P VV T  SL+  HGL      ++A R    +    V P+  T N I+  L +NR+    
Sbjct: 134 PSVVDTLLSLLADHGL-----LDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLV 188

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            RL DL+      PN  T+N ++D  C  G++  A  LF  M++MGC  D V+YN LI+G
Sbjct: 189 RRLFDLLPV----PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDG 244

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           Y K  ++EE   L  EM   G    VVTYN L     +  ++E A   F EM+R GV A+
Sbjct: 245 YGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVAN 304

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T++TF+D  CK G + EA++LF  +R+     +   Y  L+DG CK+GRL  A  L  
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            + H  LVPNVVTY +M+ GLC +G++ +A ++   ME      + + +  LIHG    N
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +  +LL++MK K +  D S+   ++  L K++
Sbjct: 425 NSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 41/320 (12%)

Query: 91  GLFPNLYTYNILINCFCKIGRVS-----LGFIAFGRI----------LRSCFTPN----- 130
           GL PN+ TY ++++  CK G+V+     L  +  G +          +   F  N     
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERA 429

Query: 131 ---------------AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                           + + +LI GL  + ++ EA +L  K+   G  PN + Y T+++ 
Sbjct: 430 LDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDA 489

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L + G    A+ L  ++ +         +PN VTY  +IDGLCK G + +A + F +M++
Sbjct: 490 LFKAGKESEAVALLHKILDSG------FQPNVVTYCALIDGLCKAGSISEAISHFNKMRE 543

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             ++P+V  Y +LI G C     N+A  L  EM+D+G+    V +  ++D   K   + +
Sbjct: 544 LGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQD 603

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L   M++ G++ +   Y   + GFC M  +  A  +   M   G   D   YN LI 
Sbjct: 604 AFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIR 663

Query: 356 GYCKNKEVEEALSLYREMVS 375
            Y K   +EEA SL  EM S
Sbjct: 664 KYQKLGNMEEASSLQNEMES 683



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 8/266 (3%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G+  ++  Y  LI   CK  +V        ++      PN   + +++  L    
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +  EA AL  K+   G +PNV+TY  LI+GLC+ G    A++ F +M     E+G+   P
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR----ELGL--DP 548

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N   Y+ +IDG CK G ++KA  L  +M D+ ++ D V Y SLI G     +  +A  L 
Sbjct: 549 NVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALK 608

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++ G+Q  +  +   +   C    M EA  +L  M+  G+ P+   YN L+  +  +
Sbjct: 609 TKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKL 668

Query: 326 GKINRAEELFGSMESM--GCKHDDVS 349
           G +  A  L   MES+   C  DD +
Sbjct: 669 GNMEEASSLQNEMESVLSSCTEDDTA 694



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)

Query: 396 HQVEHALKLFDEMQRDGVAADTR------TYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
           H+   A  L D + R  +A   R         T +  L  +G + +AV     +R L+  
Sbjct: 107 HRPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVP 166

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            + +  N ++  L ++ +      LF  LP    VPNV T+NI+I  LC +G++ +AR L
Sbjct: 167 PNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARAL 222

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F+ M+    +PDV+T++ LI G+ +  +  +V +L+ +M++     D    + +++   K
Sbjct: 223 FVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSK 282

Query: 570 NEISLKSLPSFLVQERQGEVG 590
                K+   F   +RQG V 
Sbjct: 283 FGRMEKAYSYFGEMKRQGVVA 303



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 10/223 (4%)

Query: 369 LYREMVSKGIK----PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           L+R  ++ G +    P+VV  +TL   L +   ++ A++    +++  V  +TRT    +
Sbjct: 119 LHRAALALGPRRSALPSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHIL 176

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
             L +N        L R L  L    ++  +N +ID LCK G L  A  LF  +      
Sbjct: 177 LRLARN----RQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCS 232

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+VVTYN +I G    G +++   L  +M ++  A DV+T++ LI+ F +     K    
Sbjct: 233 PDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSY 292

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +MK + V+ +    S  VD   K  +  +++  F     +G
Sbjct: 293 FGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG 335


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 155/489 (31%), Positives = 257/489 (52%), Gaps = 7/489 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI+   + G        + R++     P+  TF++L+       
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
                 +L  ++++ G +PN+ TY   I  L R G    A  + + M +        C P
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDG------CGP 297

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC  G +D A  LF++MK  +  PD VTY +++       D    K  +
Sbjct: 298 DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFW 357

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P V+TF ++++ LCK   +DEA  LLD+M ++GV PN  TYNTL+ G   +
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A +LF +ME++G      +Y + I+ Y K+   ++AL  + +M  +GI P +V  
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L E+ ++  A  +F+ ++ +G+A D+ TY   +    K G + EA+EL   +  
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            +CE DI   N LI+ L K+GR+  AW++FC L    L P VVTYN +I GL  +GQ+ +
Sbjct: 538 NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVV 564
           A +LF  M  N   P+ ITF+ ++    + +E     ++L+KM     MPD  +  +I+ 
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657

Query: 565 DLLVKNEIS 573
            L+++  +S
Sbjct: 658 GLVIEKRVS 666



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 171/527 (32%), Positives = 262/527 (49%), Gaps = 21/527 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNI 101
           ++A   F+ M ++    P + + N  L SLA+       K    RL + GL P+  TYN+
Sbjct: 456 DKALETFEKM-KIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNM 514

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++ C+ K G+V         +  +   P+    NSLI  L+   R+ EA  +F +LK   
Sbjct: 515 MMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMK 574

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P V+TYNTLI GL + G    A+ LF  M  GNG     C PNT+T++TI+D LCK  
Sbjct: 575 LAPTVVTYNTLIAGLGKEGQVQRAMELFASMT-GNG-----CPPNTITFNTILDCLCKND 628

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A  +  +M   N  PDV+T+N++IHGL      ++A  LF   M + + P  VT  
Sbjct: 629 EVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLF-HQMKKMLTPDCVTLC 687

Query: 282 VIMDELCKNRKMDEASRLLDLMVQR-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            ++  + KN  M++A ++ +  V R GV  +   +  LM G        +   LFG    
Sbjct: 688 TLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTI-LFGDRLV 746

Query: 341 MG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQ 397
            G  CK   V   I I   CK+K+   A S++     + G+KPT+ +YN L  G   +H 
Sbjct: 747 CGRVCKDGSVLMPI-IKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHN 805

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E A  LF EM+  G A D  TY   +D   K+G I E  EL+  +    C+ +   +N 
Sbjct: 806 DEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNI 865

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I  L KS  L  A +LF  L  G   P   TY  ++ GL   G++++A++LF +M +  
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIV 563
             P+   +++LI+GF +  + +   EL  +M  + + PD  S  S+V
Sbjct: 926 CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLV 972



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 260/551 (47%), Gaps = 51/551 (9%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
            EA  IF+  L+ +   P   ++N+++   +K    D      + ++     P++   N L
Sbjct: 492  EAKVIFN-RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSL 550

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
            IN   K GRV   +  F R+      P   T+N+LI GL  E ++  A  LF  +   GC
Sbjct: 551  INTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGC 610

Query: 163  EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             PN IT+NT+++ LC+     +AL +  +M   N      C P+ +T++TII GL  E  
Sbjct: 611  PPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN------CMPDVLTFNTIIHGLVIEKR 664

Query: 223  VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA----------------KRLFI 266
            V  A  LF QMK + + PD VT  +L+ G+       +A                +R + 
Sbjct: 665  VSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723

Query: 267  EMM-----DQGVQPSVV---------------TFNVIMDELCKNRK-MDEASRLLDLMVQ 305
            ++M       G + +++                   I+  LCK+++ +   S  +    +
Sbjct: 724  DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783

Query: 306  RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             GV+P   +YN L++GF  +     A  LF  M++ GC  D  +YN+L++ + K+ ++ E
Sbjct: 784  LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 366  ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
               LY +M+    KP  +T+N +   L + + ++ AL LF ++     +    TY   +D
Sbjct: 844  LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 426  GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            GL K+G + EA ELF  +    C  +   YN LI+G  K+G +  A ELF  +    + P
Sbjct: 904  GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963

Query: 486  NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            ++ +Y  ++  LC  G++D A   F  +++     D I ++++I G  R +   +   L 
Sbjct: 964  DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023

Query: 546  HKMKEKKVMPD 556
             +M+ + + PD
Sbjct: 1024 DEMQSRGINPD 1034



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 251/531 (47%), Gaps = 16/531 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EAF + D M R     P + ++N L++ L +    D  L+        G+ P  YTY +
Sbjct: 386 DEAFHLLDVM-RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL 444

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I+ + K GR       F ++      PN    N+ +  L    R+ EA  +F +LK+ G
Sbjct: 445 FIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNG 504

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ +TYN ++    + G    A+ L  +M+         C+P+ +  +++I+ L K G
Sbjct: 505 LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ------CEPDIIVINSLINTLYKAG 558

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A  +F ++KD  + P VVTYN+LI GL        A  LF  M   G  P+ +TFN
Sbjct: 559 RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFN 618

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+D LCKN ++D A ++L  M      P+  T+NT++ G  +  +++ A  LF  M+ M
Sbjct: 619 TILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM 678

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEH 400
               D V+   L+ G  KN  +E+A  +  + V + G+      +  L  G+      E 
Sbjct: 679 -LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEK 737

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLI 459
            +   D +    V  D       I  LCK+   + A  +F R  + L  +  +++YN LI
Sbjct: 738 TILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLI 797

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G       + AW LF  + +    P+V TYN+++      G++++  +L+  M  ++  
Sbjct: 798 EGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCK 857

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           P+ IT +++I   ++ N   K  +L + +      P       ++D L+K+
Sbjct: 858 PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKS 908



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 248/523 (47%), Gaps = 41/523 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
            +EA+ +F  +  M  +P  V ++N L+A L K             +   G  PN  T+N 
Sbjct: 561  DEAWKMFCRLKDMKLAPT-VVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNT 619

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +++C CK   V L      ++      P+  TFN++I GL  E R+ +A  LF ++K   
Sbjct: 620  ILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM- 678

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI---------------------- 199
              P+ +T  TL+ G+ + G    A  + E+  +  G                        
Sbjct: 679  LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKT 738

Query: 200  ---------GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLI 249
                     G VCK  +V    II  LCK      A+++F++   E  + P + +YN LI
Sbjct: 739  ILFGDRLVCGRVCKDGSVLMP-IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLI 797

Query: 250  HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
             G    ++   A  LF EM + G  P V T+N+++D   K+ K++E   L + M+    +
Sbjct: 798  EGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCK 857

Query: 310  PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            PN  T+N ++        +++A +LF  + S        +Y  L++G  K+  +EEA  L
Sbjct: 858  PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917

Query: 370  YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
            + EMV  G +P    YN L  G  +   V  A +LF  M R+G+  D ++YT+ +  LC+
Sbjct: 918  FEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCE 977

Query: 430  NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
             G + +A+  F  L+     LD  AYN +IDGL +S R++ A  L+  +    + P++ T
Sbjct: 978  AGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFT 1037

Query: 490  YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            YN +I  L   G +++A  L+ +++     P+V T++ LI G+
Sbjct: 1038 YNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 255/543 (46%), Gaps = 44/543 (8%)

Query: 75  ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
             L + K + + + A G  P++ T+ IL+N  CK G +   F     + +    PN  T+
Sbjct: 348 GDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTY 407

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N+LI GL   +R+ +A  LF  ++  G  P   TY   I+   ++G +  AL  FE+M  
Sbjct: 408 NTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKI 467

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                     PN V  +  +  L + G + +AK +F ++K   + PD VTYN ++     
Sbjct: 468 RG------IAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSK 521

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           A   +EA  L  +M +   +P ++  N +++ L K  ++DEA ++   +    + P   T
Sbjct: 522 AGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVT 581

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YNTL+ G    G++ RA ELF SM   GC  + +++N +++  CKN EV+ AL +  +M 
Sbjct: 582 YNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT 641

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           +    P V+T+NT+  GL    +V  A+ LF +M++  +  D  T  T + G+ KNG + 
Sbjct: 642 TMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLME 700

Query: 435 EAVELFRT-LRILKCELDIQAYNCLIDG-------------------------------- 461
           +A ++    +  L   +D + +  L+ G                                
Sbjct: 701 DAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPI 760

Query: 462 ---LCKSGRLKFAWELFCSLPHGVLV-PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
              LCK  +   A  +F      + V P + +YN +I+G       + A +LF +M+   
Sbjct: 761 IKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG 820

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            APDV T+++L+    +  + +++ EL  +M      P+    +I++  LVK+    K+L
Sbjct: 821 CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880

Query: 578 PSF 580
             F
Sbjct: 881 DLF 883



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 239/508 (47%), Gaps = 50/508 (9%)

Query: 64   PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
            PP   +FN +L  L KN   D       ++      P++ T+N +I+      RVS    
Sbjct: 611  PPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIW 670

Query: 118  AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK--------------------- 156
             F + ++   TP+  T  +L+ G+  ++ +ME A    +                     
Sbjct: 671  LFHQ-MKKMLTPDCVTLCTLLPGV-VKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGG 728

Query: 157  -LKAFGCEPNVITYNTLING---------------LCRTGHTMIALNLFEEMANGNGEIG 200
             L   G E  ++  + L+ G               LC+    ++A ++F        E+G
Sbjct: 729  ILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTK---ELG 785

Query: 201  VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
            V  KP   +Y+ +I+G       + A  LF +MK+    PDV TYN L+     +   NE
Sbjct: 786  V--KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 261  AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
               L+ +M+    +P+ +T N+I+  L K+  +D+A  L   +V     P  CTY  L+D
Sbjct: 844  LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 321  GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            G    G++  A+ELF  M   GC+ ++  YNILING+ K  +V  A  L++ MV +GI+P
Sbjct: 904  GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963

Query: 381  TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             + +Y +L   L E  +V+ AL  F+++++ G+  D+  Y   IDGL ++  I EA+ L+
Sbjct: 964  DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023

Query: 441  RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
              ++      D+  YN LI  L  +G ++ A +L+  L    L PNV TYN +I+G    
Sbjct: 1024 DEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMS 1083

Query: 501  GQMDKARDLFLDMEENAAAPDVITFDML 528
            G  D A  ++  M     +P+  TF  L
Sbjct: 1084 GNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 44/427 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R G  ++  NL +           + K +  TY  I  GL   G + +    F +M++  
Sbjct: 139 RVGDMVVVFNLMQNQ---------IIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG 189

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
            + +  +YN LIH L  +    EA  ++  M+ +G++PS+ TF+ +M    K R  +   
Sbjct: 190 FHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVK 249

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL+ M   G++PN  TY   +      G+I+ A  +   ME  GC  D V+Y +LI+  
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   ++++A+ L+ +M +   KP  VTY T+     +   +    + + EM+ DG A D 
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+T  ++ LCK G I EA  L   +R      ++  YN LI GL +  RL  A +LF +
Sbjct: 370 ITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNN 429

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM------------------------ 513
           +    +VP   TY + I      G+ DKA + F  M                        
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGR 489

Query: 514 -----------EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
                      + N  APD +T++M++  + +  +  +  ELL  M E +  PD  +++ 
Sbjct: 490 LREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549

Query: 563 VVDLLVK 569
           +++ L K
Sbjct: 550 LINTLYK 556



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 155/323 (47%), Gaps = 13/323 (4%)

Query: 39   EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGL 92
            EG + V     A+ +F  M +     P V ++N+LL +  K+   +       ++  +  
Sbjct: 798  EGFLGVHNDEMAWNLFTEM-KNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSC 856

Query: 93   FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
             PN  T+NI+I    K   +      F  ++   F+P   T+  L+ GL    R+ EA  
Sbjct: 857  KPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKE 916

Query: 153  LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            LF ++  +GC PN   YN LING  +TG    A  LF+ M           +P+  +Y++
Sbjct: 917  LFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG------IRPDLKSYTS 970

Query: 213  IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            ++  LC+ G VD A   F ++K   +  D + YN +I GL  ++   EA  L+ EM  +G
Sbjct: 971  LVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRG 1030

Query: 273  VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            + P + T+N ++  L     +++A +L + +   G+ PN  TYN L+ G+ + G  + A 
Sbjct: 1031 INPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAY 1090

Query: 333  ELFGSMESMGCKHDDVSYNILIN 355
             ++  M   GC  +  ++  L N
Sbjct: 1091 AVYKRMMVGGCSPNTGTFAQLPN 1113



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 148/291 (50%)

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N +++ L  +R++ +   + +LM  + ++ +  TY  +  G  + G + +    FG M
Sbjct: 126 TCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKM 185

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   +  SYN LI+   ++    EAL +YR MV +G+KP++ T++ L +   +    
Sbjct: 186 REAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDT 245

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E    L +EM+  G+  +  TYT  I  L + G I EA  + + +    C  D+  Y  L
Sbjct: 246 ETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVL 305

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           ID LC +G+L  A ELF  +      P+ VTY  M+    + G + + ++ + +ME +  
Sbjct: 306 IDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGY 365

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           APDVITF +L++   +     +   LL  M+++ V+P+    + ++  L++
Sbjct: 366 APDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLR 416



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 146/317 (46%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F  M +Q ++  + T+ +I   L     + +       M + G   NA +YN L+    
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G    A E++  M   G K    +++ L+    K ++ E   SL  EM S G+KP + 
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY      L    +++ A ++   M+ DG   D  TYT  ID LC  G + +A+ELF  +
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +    + D   Y  ++D     G L    E +  +      P+V+T+ I++  LC  G +
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A  L   M +    P++ T++ LI G +R+N      +L + M+   V+P A    + 
Sbjct: 386 DEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILF 445

Query: 564 VDLLVKNEISLKSLPSF 580
           +D   K+  S K+L +F
Sbjct: 446 IDFYGKSGRSDKALETF 462


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 180/569 (31%), Positives = 281/569 (49%), Gaps = 35/569 (6%)

Query: 9   RSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVIT-------------PNEAFCIFD 55
           +SF   S P +A R           +++++  ++NV+               +E + +F 
Sbjct: 154 KSFCRTSRPHAALRL--------LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFG 205

Query: 56  YMLRMHPSPPPVSSFNILLASLAKN---KHYDTRLNAT---GLFPNLYTYNILINCFCKI 109
            ML    S   +S+FN LL  L K    K  +  L+     G+ PNL+TYN  I   C+ 
Sbjct: 206 KMLASGVSLC-LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQK 264

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G +       GR++     P+  T+N LI GL   S+  EA     KL   G EP+  TY
Sbjct: 265 GELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTY 324

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           NTLI G C+ G   +A  +    A  NG +     P+  TY ++IDGLC EG  ++A AL
Sbjct: 325 NTLIAGYCKGGMVQLAERILVN-AVFNGFV-----PDEFTYRSLIDGLCHEGETNRALAL 378

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           F +   + I P+V+ YN+LI GL +     EA +L  EM ++G+ P V TFN++++ LCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
              + +A  L+ +M+ +G  P+  T+N L+ G+    K+  A E+   M   G   D  +
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN L+NG CK  + E+ +  Y+ MV KG  P + T+N L   L   H+++ AL L +EM+
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMK 558

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR-ILKCELDIQAYNCLIDGLCKSGRL 468
              V  D  T+ T IDG CKNG +  A  LFR +  +         YN +I    +   +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNV 618

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A +LF  +    L P+  TY +M+ G C  G +D      L+M EN   P + T   +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRV 678

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           I+     +   +   ++H+M +K ++P+A
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEA 707



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 236/477 (49%), Gaps = 6/477 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P +++YN +++     G        + R+     TP+  +F   +K     SR   A  L
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              + + GCE NV+ Y T++ G            LF +M      + +       T++ +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLS------TFNKL 222

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +  LCK+G V + + L  ++    + P++ TYN  I GLC   + + A R+   ++DQG 
Sbjct: 223 LHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGP 282

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P VVT+N ++  LCKN K  EA   L  +V  G+ P++ TYNTL+ G+C  G +  AE 
Sbjct: 283 KPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAER 342

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +  +    G   D+ +Y  LI+G C   E   AL+L+ E + KGIKP V+ YNTL  GL 
Sbjct: 343 ILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
               +  A +L  EM   G+  + +T+   ++GLCK G + +A  L + +       DI 
Sbjct: 403 NQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LI G     +++ A E+   +    + P+V TYN ++ GLC   + +   + +  M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM 522

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            E   AP++ TF++L+    R ++  K   LL +MK K V PDA     ++D   KN
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/567 (27%), Positives = 273/567 (48%), Gaps = 55/567 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            EA  +F+ M   +   P V S+N +++ L  + ++D       R+   G+ P++Y++ I
Sbjct: 93  QEAVNVFERM-DFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +  FC+  R          +       N   + +++ G + E+   E   LF K+ A G
Sbjct: 152 RMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASG 211

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
               + T+N L++ LC+ G       L +++     + GV+  PN  TY+  I GLC++G
Sbjct: 212 VSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI----KRGVL--PNLFTYNFFIQGLCQKG 265

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  +  ++ D+   PDVVTYN LI+GLC  + + EA+    +++++G++P   T+N
Sbjct: 266 ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYN 325

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   CK   +  A R+L   V  G  P+  TY +L+DG C  G+ NRA  LF      
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 342 GCKHDDVSY-----------------------------------NILINGYCKNKEVEEA 366
           G K + + Y                                   NIL+NG CK   V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L + M+SKG  P + T+N L  G     ++E+AL++ D M  +GV  D  TY + ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK     + +E ++T+    C  ++  +N L++ LC+  +L  A  L   + +  + P+
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEE----NAAAPDVITFDMLIHGFIRINEPSKVN 542
            VT+  +I G C +G +D A  LF  MEE    + + P   T++++IH F      +   
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP---TYNIIIHAFTEKLNVTMAE 622

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +L  +M ++ + PD     ++VD   K
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCK 649



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 212/440 (48%), Gaps = 54/440 (12%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L KN  +        +L   GL P+ +TYN LI  +CK G V L    
Sbjct: 284 PDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERI 343

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               + + F P+  T+ SLI GL  E     A ALF +    G +PNVI YNTLI GL  
Sbjct: 344 LVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF-------- 230
            G  + A  L  EM+    E G++  P   T++ +++GLCK G V  A  L         
Sbjct: 404 QGLILEAAQLASEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 231 ---------------LQMKDEN------------INPDVVTYNSLIHGLCHANDWNEAKR 263
                           Q+K EN            ++PDV TYNSL++GLC  + + +   
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVME 517

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
            +  M+++G  P++ TFN++++ LC+  K+D+A  LL+ M  + V P+A T+ TL+DGFC
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFC 577

Query: 324 LMGKINRAEELFGSMES---MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
             G ++ A  LF  ME    + C     +YNI+I+ + +   V  A  L++EMV + + P
Sbjct: 578 KNGDLDGAYTLFRKMEEVYMVSCSTP--TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              TY  +  G  +   V+   K   EM  +G      T    I+ LC    + EA  + 
Sbjct: 636 DGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695

Query: 441 RTLRILKCELDIQAYNCLID 460
              R+++  L  +A N + D
Sbjct: 696 H--RMVQKGLVPEAVNTIFD 713



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 176/351 (50%)

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           ++G V +A  +F +M   +  P V +YN+++  L  +  +++A ++++ M D+G+ P V 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           +F + M   C+  +   A RLL+ M  +G   N   Y T++ GF      +   ELFG M
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            + G      ++N L++  CK  +V+E   L  +++ +G+ P + TYN    GL +  ++
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A+++   +   G   D  TY   I GLCKN    EA      L     E D   YN L
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G CK G ++ A  +  +      VP+  TY  +I GLC++G+ ++A  LF +      
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            P+VI ++ LI G        +  +L  +M EK ++P+    +I+V+ L K
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 183/396 (46%), Gaps = 8/396 (2%)

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           M AL +F  M   +G      K    TY +II+ L   G  +  + + + M+ +N+   +
Sbjct: 21  MKALEMFNSMRKEDG-----FKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMR-QNVGNHM 74

Query: 243 V--TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +   Y   +          EA  +F  M     +P+V ++N IM  L  +   D+A ++ 
Sbjct: 75  LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVY 134

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  RG+ P+  ++   M  FC   + + A  L  +M S GC+ + V+Y  ++ G+ + 
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              +E   L+ +M++ G+   + T+N L   L +   V+   KL D++ + GV  +  TY
Sbjct: 195 NFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
             FI GLC+ G +  AV +   L     + D+  YN LI GLCK+ + + A      L +
Sbjct: 255 NFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVN 314

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+  TYN +I G C  G +  A  + ++   N   PD  T+  LI G     E ++
Sbjct: 315 EGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNR 374

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              L ++   K + P+  + + ++  L    + L++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 132/306 (43%), Gaps = 36/306 (11%)

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHD 346
           C+   M        +  + G +    TY ++++   L GK    EE+   M +++G    
Sbjct: 16  CQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHML 75

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           +  Y   +  Y +  +V+EA++++  M     +PTV +YN +   L +    + A K++ 
Sbjct: 76  EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYM 135

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG----- 461
            M+  G+  D  ++T  +   C+      A+ L   +    CE+++ AY  ++ G     
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195

Query: 462 ------------------------------LCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
                                         LCK G +K   +L   +    ++PN+ TYN
Sbjct: 196 FKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
             IQGLC  G++D A  +   + +    PDV+T++ LI+G  + ++  +    L K+  +
Sbjct: 256 FFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNE 315

Query: 552 KVMPDA 557
            + PD+
Sbjct: 316 GLEPDS 321


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 270/520 (51%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILL--------ASLAKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S+N++L         S+A N  YD  + + G+ PN YT
Sbjct: 155 PGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYD--MLSKGVSPNDYT 212

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + +++   C +  V    +    + +    PN+  + +LI  L    R+ EA  L  ++ 
Sbjct: 213 FGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMF 272

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+V T+NT+I G CR    +    L + M      I     PN +TY  ++ GLC
Sbjct: 273 LMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM------ILKGFTPNDMTYGYLMHGLC 326

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR-LFIEMMDQGVQPSV 277
           K   +D+A+AL  ++      P+VV +N+L++G       NEA   ++ +M++ G  P V
Sbjct: 327 KTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDV 382

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            TF+ +++ LCK      A  L++ M  +G +PN  TY  L+DGFC  G++  A  +   
Sbjct: 383 FTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILRE 442

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G   + V YN LI+  CK+ ++ EAL ++ EM SKG KP + T+N+L  GL  + +
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E AL L+ +M  +GV A++ T+ T I    + G I EA++L   +    C LD   YN 
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LCK+G ++    LF  +    L P+++T NI+I G C  G++  A +   DM    
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +PD++T++ LI+G  +     +   L  K++ + + PD+
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 158/455 (34%), Positives = 235/455 (51%), Gaps = 20/455 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNI 101
           +EA  + + M  M   PP V++FN ++    +            R+   G  PN  TY  
Sbjct: 262 DEALKLLEEMFLMG-CPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA-LFTKLKAF 160
           L++  CK  R+         +L     PN   FN+L+ G     R+ EA A ++ K+   
Sbjct: 321 LMHGLCKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINN 376

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           G  P+V T++TL+NGLC+ G    AL L  +M A G       CKPN  TY+ +IDG CK
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG-------CKPNLNTYTILIDGFCK 429

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G +++A  +  +M  +  + + V YN+LI  LC     +EA  +F EM  +G +P + T
Sbjct: 430 KGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFT 489

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           FN ++  LC+  +M++A  L   MV  GV  N+ T+NTL+  F   G+I  A +L   M 
Sbjct: 490 FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC  D+++YN LI   CK   VE+ L L+ EM+ KG+ P+++T N L  G     +V 
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVH 609

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           +AL+   +M   G + D  TY + I+GLCK G I EA+ LF  L+    + D   YN LI
Sbjct: 610 NALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLI 669

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
             LC+ G    A  L         VPN VT+NI++
Sbjct: 670 CWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 215/441 (48%), Gaps = 12/441 (2%)

Query: 149 EAAALFTKLKA-FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +A  L   +K  + CEP+  +YN +++ L       +A N+F +M +     GV   PN 
Sbjct: 157 QATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK----GV--SPND 210

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            T+  ++  LC    VD A  L   M      P+ + Y +LI  L   +  +EA +L  E
Sbjct: 211 YTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEE 270

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G  P V TFN ++   C+  ++ E ++L+D M+ +G  PN  TY  LM G C   +
Sbjct: 271 MFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCR 330

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-LYREMVSKGIKPTVVTYN 386
           I+ A+ L   +      H    +N L+NG+ +N  + EA + +Y +M++ G  P V T++
Sbjct: 331 IDEAQALLSKVPGPNVVH----FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFS 386

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  GL +      AL+L ++M   G   +  TYT  IDG CK G + EA  + R +   
Sbjct: 387 TLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK 446

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              L+   YN LI  LCK G++  A ++F  +      P++ T+N +I GLC   +M+ A
Sbjct: 447 GFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDA 506

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L+ DM       + +TF+ LIH F+R  E  +  +L++ M  +    D    + ++  
Sbjct: 507 LALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKA 566

Query: 567 LVKNEISLKSLPSFLVQERQG 587
           L K     K L  F    R+G
Sbjct: 567 LCKTGAVEKGLGLFEEMIRKG 587



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 213/441 (48%), Gaps = 11/441 (2%)

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           C  P+  ++N ++  L   +    A+ +F  + + G  PN  T+  ++  LC       A
Sbjct: 170 CCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNA 229

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L  +M          C PN++ Y T+ID L K   VD+A  L  +M      PDV T+
Sbjct: 230 CLLLRDMTKHG------CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTF 283

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N++I+G C  N   E  +L   M+ +G  P+ +T+  +M  LCK  ++DEA  LL     
Sbjct: 284 NTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL----S 339

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEE-LFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +   PN   +NTL++GF   G++N A   ++  M + G   D  +++ L+NG CK     
Sbjct: 340 KVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFG 399

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            AL L  +M +KG KP + TY  L  G  +  Q+E A  +  EM   G + +T  Y   I
Sbjct: 400 SALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALI 459

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
             LCK+G I EA+++F  +    C+ DI  +N LI GLC+   ++ A  L+  +    ++
Sbjct: 460 SALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVI 519

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N VT+N +I      G++ +A  L  DM       D IT++ LI    +     K   L
Sbjct: 520 ANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGL 579

Query: 545 LHKMKEKKVMPDASIVSIVVD 565
             +M  K + P     +I+++
Sbjct: 580 FEEMIRKGLTPSIITCNILIN 600



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 186/382 (48%), Gaps = 43/382 (11%)

Query: 29  LVHFRDLT---TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT 85
           +VHF  L     R G +N  T   AF ++D M+  +   P V +F+ L+  L K   + +
Sbjct: 346 VVHFNTLVNGFVRNGRLNEAT---AF-VYDKMIN-NGYVPDVFTFSTLVNGLCKKGLFGS 400

Query: 86  RL------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
            L      +A G  PNL TY ILI+ FCK G++    +    +L   F+ N   +N+LI 
Sbjct: 401 ALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALIS 460

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM------A 193
            L    +I EA  +F ++ + GC+P++ T+N+LI GLCR      AL L+ +M      A
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIA 520

Query: 194 NG------------NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           N              GEI              C  + +TY+ +I  LCK G V+K   LF
Sbjct: 521 NSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLF 580

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M  + + P ++T N LI+G C A   + A     +M+ +G  P +VT+N +++ LCK 
Sbjct: 581 EEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKR 640

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            ++ EA  L + +   G++P++ TYNTL+   C  G  + A  L       G   +DV++
Sbjct: 641 GRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTW 700

Query: 351 NILINGYCKNKEVEEALSLYRE 372
           NIL+  + K    E     Y +
Sbjct: 701 NILVYNFGKQSNSEGQTITYAQ 722



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 6/328 (1%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR-LLDL 302
            Y  LI  L  A  +    RL ++M ++G+      F +IM    +     +A+R LLD+
Sbjct: 106 VYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM 165

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
                  P+  +YN ++D   +    + A  +F  M S G   +D ++ +++   C   E
Sbjct: 166 KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNE 225

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V+ A  L R+M   G  P  + Y TL   L +  +V+ ALKL +EM   G   D  T+ T
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G C+   ++E  +L   + +     +   Y  L+ GLCK+ R+  A  L   +P   
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG-- 343

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLD-MEENAAAPDVITFDMLIHGFIRINEPSKV 541
             PNVV +N ++ G   +G++++A     D M  N   PDV TF  L++G  +       
Sbjct: 344 --PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSA 401

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
            EL++ M  K   P+ +  +I++D   K
Sbjct: 402 LELVNDMDAKGCKPNLNTYTILIDGFCK 429


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 164/520 (31%), Positives = 268/520 (51%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S+N++L  L        A N  YD  + + G+ P +YT
Sbjct: 145 PGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYD--MLSRGISPTVYT 202

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + +++  FC +  V         + +    PN+  +  LI  L   +R+ EA  L  ++ 
Sbjct: 203 FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMF 262

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GCEP+V T+N +I+GLC+ G    A  L + M   +         + +    ++ GLC
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD------FTADALIQGYLMHGLC 316

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-MMDQGVQPSV 277
           + G VD+A+A+  ++     NP+ V YN+LI+G   +  + EAK L  + M+  G +P  
Sbjct: 317 RMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            TFN+++D LCK   +  A   LD MV++G  PN  TY  L+DGFC  G    A ++  S
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G   + V YN LI   CK+ ++++AL +Y EM SKG KP + T+N+L  GL +  +
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E AL L+ +M  +GV A+T TY T I    +   I +A +L   +R   C LD   YN 
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LCK+G  +    L   +    + P++ + NI+I   C  G+++ A     DM +  
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
             PD++T++ LI+G  ++    +   L + ++ K + PDA
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/451 (32%), Positives = 224/451 (49%), Gaps = 12/451 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK--HYDTRLNATGLFPNLYTYNILINC 105
           NEA  + + M  M    P V +FN ++  L K    H   +L+   L  + +T + LI  
Sbjct: 252 NEAMKLLEEMFLMG-CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD-FTADALIQG 309

Query: 106 FCKIGRVSLGFIAFGR-ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCE 163
           +   G   +G +   R +L     PN   +N+LI G     R  EA  L  K +   G E
Sbjct: 310 YLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+  T+N +I+GLC+ G+ + AL   +EM     E      PN +TY+ +IDG CK+G  
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE------PNVITYTILIDGFCKQGHF 423

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           ++A  +   M  + ++ + V YN LI  LC      +A +++ EM  +G +P + TFN +
Sbjct: 424 EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LCKN KM+EA  L   M+  GV  N  TYNTL+  F  +  I +A++L G M   GC
Sbjct: 484 IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC 543

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D+++YN LI   CK    E+ L L  +M  + I P++ + N L        +V  AL+
Sbjct: 544 PLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQ 603

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
              +M + G+  D  TY + I+GLCK G   EA+ LF  L+      D   YN LI   C
Sbjct: 604 FLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
             G    A +L         +PN +T++I+I
Sbjct: 664 YEGLFNDACQLLFKGVSNGFIPNEITWSILI 694



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 217/442 (49%), Gaps = 14/442 (3%)

Query: 149 EAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +A  L   +    C EP   +YN ++  L       +A N+F +M +          P  
Sbjct: 147 QATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRG------ISPTV 200

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            T+  ++   C    VD A +L   M      P+ + Y  LIH L   N  NEA +L  E
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G +P V TFN ++  LCK  ++ EA++L D M+ R    +A     LM G C MGK
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL-YREMVSKGIKPTVVTYN 386
           ++ A  +   + +     + V YN LINGY  +   EEA  L Y+ MV  G +P   T+N
Sbjct: 321 VDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL +   +  AL+  DEM + G   +  TYT  IDG CK G+  EA ++  ++   
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              L+   YNCLI  LCK G+++ A +++  +      P++ T+N +I GLC + +M++A
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L+ DM       + +T++ LIH F+R+    + ++L+ +M+ +    D    + ++  
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKA 556

Query: 567 LVKNEISLKSLPSFLVQERQGE 588
           L K   + K L   L+++  GE
Sbjct: 557 LCKTGATEKCLG--LIEQMFGE 576



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 216/441 (48%), Gaps = 11/441 (2%)

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           CF P   ++N +++ L A +    A  +F  + + G  P V T+  ++   C       A
Sbjct: 160 CFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSA 219

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
            +L  +M          C PN++ Y  +I  L +   V++A  L  +M      PDV T+
Sbjct: 220 CSLLRDMTKHG------CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTF 273

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N +IHGLC A   +EA +L   M+ +      +    +M  LC+  K+DEA      M+ 
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA----MLS 329

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEEL-FGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +   PN   YNTL++G+ + G+   A++L + +M   G + D  ++NI+I+G CK   + 
Sbjct: 330 KIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLV 389

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            AL    EMV KG +P V+TY  L  G  +    E A K+ + M   G++ +T  Y   I
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLI 449

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
             LCK+G I +A++++  +    C+ DI  +N LI GLCK+ +++ A  L+  +    ++
Sbjct: 450 GALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI 509

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N VTYN +I        + +A  L  +M       D IT++ LI    +     K   L
Sbjct: 510 ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569

Query: 545 LHKMKEKKVMPDASIVSIVVD 565
           + +M  +++ P  +  +I+++
Sbjct: 570 IEQMFGEEIFPSINSCNILIN 590



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 223/477 (46%), Gaps = 11/477 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P   +YN+++          +    F  +L    +P   TF  ++K     + +  A +L
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              +   GC PN I Y  LI+ L        A+ L EEM        + C+P+  T++ +
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM------FLMGCEPDVQTFNDV 276

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I GLCK G + +A  L  +M   +   D +    L+HGLC     +EA+     M+ +  
Sbjct: 277 IHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR----AMLSKIP 332

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            P+ V +N +++    + + +EA  LL   MV  G  P+A T+N ++DG C  G +  A 
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E    M   G + + ++Y ILI+G+CK    EEA  +   M +KG+    V YN L   L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +++ AL+++ EM   G   D  T+ + I GLCKN  + EA+ L+R + +     + 
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANT 512

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI    +   ++ A +L   +       + +TYN +I+ LC  G  +K   L   
Sbjct: 513 VTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ 572

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M      P + + ++LI+ F R  + +   + L  M ++ + PD    + +++ L K
Sbjct: 573 MFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 156/312 (50%), Gaps = 14/312 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+    K  H++        ++A GL  N   YN LI   CK G++      
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +G +      P+  TFNSLI GL    ++ EA  L+  +   G   N +TYNTLI     
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI----- 519

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
             H  + L L ++     GE+    C  + +TY+ +I  LCK G  +K   L  QM  E 
Sbjct: 520 --HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P + + N LI+  C     N+A +   +M+ +G+ P +VT+N +++ LCK  +  EA 
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L + +  +G+ P+A TYNTL+  +C  G  N A +L     S G   ++++++ILIN +
Sbjct: 638 NLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYF 697

Query: 358 CKNKEVEEALSL 369
            KN    E  ++
Sbjct: 698 VKNNSDSEQFTI 709



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 152/330 (46%), Gaps = 10/330 (3%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR-LLDLM 303
           Y  LI  L +  ++    +L  +M D+G       F +IM    K     +A+R LLD+ 
Sbjct: 97  YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
                 P   +YN +++          A  +F  M S G      ++ +++  +C   EV
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + A SL R+M   G  P  + Y  L   L E ++V  A+KL +EM   G   D +T+   
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276

Query: 424 IDGLCKNGYIIEAVELFRT--LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           I GLCK G I EA +L     LR    +  IQ Y  L+ GLC+ G++  A  +   +P+ 
Sbjct: 277 IHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY--LMHGLCRMGKVDEARAMLSKIPN- 333

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARD-LFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
              PN V YN +I G    G+ ++A+D L+ +M      PD  TF+++I G  +      
Sbjct: 334 ---PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVS 390

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             E L +M +K   P+    +I++D   K 
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQ 420



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 49/307 (15%)

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC-------------------- 343
           +QRG   +   Y  L+D    +G+    ++L   M+  GC                    
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 344 --------------------KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                               K  +V   IL+ G C     + A +++ +M+S+GI PTV 
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCP----KVAPNVFYDMLSRGISPTVY 201

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+  +      +++V+ A  L  +M + G   ++  Y   I  L +N  + EA++L   +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            ++ CE D+Q +N +I GLCK+GR+  A +L   +       + +    ++ GLC  G++
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK-MKEKKVMPDASIVSI 562
           D+AR     M      P+ + ++ LI+G++      +  +LL+K M      PDA   +I
Sbjct: 322 DEAR----AMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377

Query: 563 VVDLLVK 569
           ++D L K
Sbjct: 378 MIDGLCK 384


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 253/477 (53%), Gaps = 7/477 (1%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P++ T+N L++  CK G V      F ++L+    PN  TFN  I+GL  E  +  A 
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L   +   G  P+V+TYNT+I GLCR    + A     +M NG  E      PN  TY+
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFE------PNDFTYN 404

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           +IIDG CK+G V  A  +      +   PD  TY SL++G C   D ++A  +F + + +
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G++PS++ +N ++  LC+   +  A +L++ M ++G +P+  TYN +++G C MG ++ A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L G   + GC  D  +YN L++GYC+  +++ A+ L   M S+G+ P V+TYNTL  G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  + E  +++F  M   G A +  TY T I+ LC +  + EAV+L   ++      D
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV-TYNIMIQGLCNDGQMDKARDLF 510
           + ++  LI G CK G L  A+ LF  +     V +   TYNI+I        M  A  LF
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLF 704

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +M++N   PD  T+ +LI GF +    ++  + L +  EK  +P  +    V++ L
Sbjct: 705 SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761



 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 259/501 (51%), Gaps = 15/501 (2%)

Query: 65  PPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V++FN L+ +L K        + +D  L   G+ PNL+T+NI I   CK G +     
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLK-RGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             G + R    P+  T+N++I GL  +SR++EA     K+   G EPN  TYN++I+G C
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G  + A  + ++            KP+  TY ++++G C++G  D+A A+F     + 
Sbjct: 412 KKGMVVDANRILKDAVFKG------FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P ++ YN+LI GLC       A +L  EM ++G +P + T+N+I++ LCK   + +A+
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDAN 525

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L+   + +G  P+  TYNTL+DG+C   K++ A EL   M S G   D ++YN L+NG 
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGL 585

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  + EE + +++ M  KG  P ++TYNT+   L    +V  A+ L  EM+  G+  D 
Sbjct: 586 CKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDV 645

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
            ++ T I G CK G +  A  LFR + +          YN +I    +   +K A  LF 
Sbjct: 646 VSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFS 705

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +      P+  TY ++I G C  G +++     L+  E    P + TF  +++     +
Sbjct: 706 EMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEH 765

Query: 537 EPSKVNELLHKMKEKKVMPDA 557
           +  +   ++H M +K ++PD 
Sbjct: 766 KVQEAVGIIHLMVQKDIVPDT 786



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 169/550 (30%), Positives = 278/550 (50%), Gaps = 33/550 (6%)

Query: 18  ISAFRSNFSSLL-----VHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNI 72
           +S  RSN  + L     V       R+G I      EA   F+ M  +    P V S+N 
Sbjct: 142 LSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQ-----EAVDTFERM-DLFNCDPSVYSYNA 195

Query: 73  LLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS- 125
           ++  L +  +++       R+    +  ++YTY I I  FC+ GR         R+LR+ 
Sbjct: 196 IMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAAL----RLLRNM 251

Query: 126 ----CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
               CF+ NA  + +++ G +       A  LF ++      P+V T+N L++ LC+ G 
Sbjct: 252 PVLGCFS-NAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGF 310

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
            + +  LF+++         VC PN  T++  I GLCKEG +D+A  L   +  E + PD
Sbjct: 311 VLESERLFDKVLKRG-----VC-PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPD 364

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VVTYN++I GLC  +   EA+    +M++ G +P+  T+N I+D  CK   + +A+R+L 
Sbjct: 365 VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILK 424

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
             V +G +P+  TY +L++GFC  G  ++A  +F      G +   + YN LI G C+  
Sbjct: 425 DAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQG 484

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +  AL L  EM  KG KP + TYN +  GL ++  +  A  L  +    G   D  TY 
Sbjct: 485 LILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYN 544

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T +DG C+   +  A+EL   +       D+  YN L++GLCK+ + +   E+F ++   
Sbjct: 545 TLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEK 604

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              PN++TYN +I+ LCN  ++++A DL  +M+     PDV++F  LI GF ++ +    
Sbjct: 605 GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGA 664

Query: 542 NELLHKMKEK 551
             L   M+++
Sbjct: 665 YGLFRGMEKQ 674



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 243/464 (52%), Gaps = 6/464 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++Y+YN ++N   + G  +     + R+       +  T+   IK      R   A  L
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              +   GC  N + Y T++ G    G    A  LF+EM         +C P+  T++ +
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC-----CLC-PDVTTFNKL 301

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +  LCK+GFV +++ LF ++    + P++ T+N  I GLC     + A RL   +  +G+
Sbjct: 302 VHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGL 361

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P VVT+N ++  LC+  ++ EA   L  MV  G  PN  TYN+++DG+C  G +  A  
Sbjct: 362 RPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANR 421

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +       G K D+ +Y  L+NG+C++ + ++A++++++ + KG++P+++ YNTL  GL 
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   +  AL+L +EM   G   D  TY   I+GLCK G + +A  L        C  DI 
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIF 541

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN L+DG C+  +L  A EL   +    + P+V+TYN ++ GLC   + ++  ++F  M
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            E   AP++IT++ +I       + ++  +LL +MK K + PD 
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDV 645



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 240/463 (51%), Gaps = 8/463 (1%)

Query: 106 FCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           + + G++      F R+ L +C  P+  ++N+++  L       +A  ++ ++K    E 
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNC-DPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVES 223

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V TY   I   CRTG    AL L   M        + C  N V Y T++ G  + G  D
Sbjct: 224 DVYTYTIRIKSFCRTGRPYAALRLLRNMPV------LGCFSNAVAYCTVVTGFYEFGDND 277

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A+ LF +M +  + PDV T+N L+H LC      E++RLF +++ +GV P++ TFN+ +
Sbjct: 278 RARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFI 337

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
             LCK   +D A RLL  + + G+RP+  TYNT++ G C   ++  AEE    M + G +
Sbjct: 338 QGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFE 397

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +D +YN +I+GYCK   V +A  + ++ V KG KP   TY +L  G  +    + A+ +
Sbjct: 398 PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAV 457

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F +    G+      Y T I GLC+ G I+ A++L   +    C+ DI  YN +I+GLCK
Sbjct: 458 FKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCK 517

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            G L  A  L         +P++ TYN ++ G C   ++D A +L   M      PDVIT
Sbjct: 518 MGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           ++ L++G  +  +  +V E+   M EK   P+    + +++ L
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 223/461 (48%), Gaps = 14/461 (3%)

Query: 135 NSLIKGLHAES--------RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           N+L++G++ E+        +I EA   F ++  F C+P+V +YN ++N L   G+   A 
Sbjct: 151 NTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAH 210

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            ++  M +   E       +  TY+  I   C+ G    A  L   M       + V Y 
Sbjct: 211 KVYMRMKDKKVE------SDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYC 264

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +++ G     D + A+ LF EM++  + P V TFN ++  LCK   + E+ RL D +++R
Sbjct: 265 TVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKR 324

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           GV PN  T+N  + G C  G ++RA  L G +   G + D V+YN +I G C+   V EA
Sbjct: 325 GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 384

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
                +MV+ G +P   TYN++  G  +   V  A ++  +    G   D  TY + ++G
Sbjct: 385 EECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            C++G   +A+ +F+          I  YN LI GLC+ G +  A +L   +      P+
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           + TYN++I GLC  G +  A  L  D       PD+ T++ L+ G+ R  +     EL++
Sbjct: 505 IWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVN 564

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +M  + + PD    + +++ L K   S + +  F     +G
Sbjct: 565 RMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 46/443 (10%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL--- 217
           G +  + TY +++  L   G      NL  EM +           NT+     ++ +   
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN--------LDNTLLEGVYVEAMRFY 165

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            ++G + +A   F +M   N +P V +YN++++ L     +N+A ++++ M D+ V+  V
Sbjct: 166 GRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDV 225

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+ + +   C+  +   A RLL  M   G   NA  Y T++ GF   G  +RA ELF  
Sbjct: 226 YTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDE 285

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M       D  ++N L++  CK   V E+  L+ +++ +G+ P + T+N    GL +   
Sbjct: 286 MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A++L   + R+G+  D  TY T I GLC+   ++EA E    +     E +   YN 
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405

Query: 458 LIDGLCKSGRLKFAWEL---------------FCSLPHGV-------------------- 482
           +IDG CK G +  A  +               +CSL +G                     
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L P+++ YN +I+GLC  G +  A  L  +M E    PD+ T++++I+G  ++   S  N
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDAN 525

Query: 543 ELLHKMKEKKVMPDASIVSIVVD 565
            L+     K  +PD    + +VD
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVD 548



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 50/299 (16%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N+++  L K        H        G  P+++TYN L++ +C+  ++      
Sbjct: 503 PDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIEL 562

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+     TP+  T+N+L+ GL   ++  E   +F  +   GC PN+ITYNT+I  LC 
Sbjct: 563 VNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCN 622

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL------- 231
           +     A++L  EM +          P+ V++ T+I G CK G +D A  LF        
Sbjct: 623 SKKVNEAVDLLGEMKSKG------LTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYD 676

Query: 232 -----------------------------QMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
                                        +MK    +PD  TY  LI G C   + N+  
Sbjct: 677 VSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGY 736

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           +  +E +++G  PS+ TF  +++ LC   K+ EA  ++ LMVQ+ + P+  T NT+ + 
Sbjct: 737 KFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEA 793



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 36/298 (12%)

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKE 362
            ++G +    TY +++      GK N  E L   M S +     +  Y   +  Y +  +
Sbjct: 111 TKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGK 170

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           ++EA+  +  M      P+V +YN +   L E      A K++  M+   V +D  TYT 
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKC------------------------EL-------- 450
            I   C+ G    A+ L R + +L C                        EL        
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290

Query: 451 ---DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D+  +N L+  LCK G +  +  LF  +    + PN+ T+NI IQGLC +G +D+A 
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            L   +      PDV+T++ +I G  R +   +  E LHKM      P+    + ++D
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 5/231 (2%)

Query: 342 GCKHDDVSYNILING---YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           G KH   +Y  ++     + K  E+E  LS  R  +   +   V      F G     ++
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYG--RKGKI 171

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A+  F+ M          +Y   ++ L + GY  +A +++  ++  K E D+  Y   
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIR 231

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I   C++GR   A  L  ++P      N V Y  ++ G    G  D+AR+LF +M E   
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            PDV TF+ L+H   +     +   L  K+ ++ V P+    +I +  L K
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCK 342


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 263/511 (51%), Gaps = 13/511 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN L+ +L +     T       +++ G+ P+  T+  L+  F + G +      
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+L    +    T N LI G     R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             H   AL + + M     +      P+  TY+ +++ LCK G +++AK +  QM D   
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ T+N+LI  LC  N   EA  L  ++  +GV P V TFN++++ LCK      A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M   G  P+  TYNTL+D  C +GK+ +A +L   MES GC    ++YN +I+G C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M  +G+  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + +   CK G I +A ++  T+     E+D+  Y  LI+GLCK+GR + A ++   +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P    YN ++Q L     +  A  LF +M E    PD +T+ ++  G  R   P
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 652

Query: 539 SK-VNELLHKMKEKKVMPDASIVSIVVDLLV 568
            K   + + +M +K  +P+ S   ++ + L+
Sbjct: 653 IKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/501 (31%), Positives = 245/501 (48%), Gaps = 9/501 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +   YN L+N   +  ++ L    +  +      P+  TFN+L+K L    ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ + G  P+  T+ TL+ G    G    AL +   M     E+G  C    VT 
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML----EMG--CSATKVTV 254

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A ++   M+ 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P V T+N++++ LCKN +++EA  +L+ MV RG  P+  T+NTL+   C   ++  
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  VTYNTL  
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L  + ++  AL L  +M+  G    T TY T IDGLCK   I EA E+F  + +     
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   +N LIDGLCK  ++  A+EL   +    L PN +TYN ++   C  G + KA D+ 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M  N    DV+T+  LI+G  +        ++L  M+ K + P     + V+  L + 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 571 EISLKSLPSFLVQERQGEVGE 591
                +L  F       EVGE
Sbjct: 615 NNIRDALSLF---REMAEVGE 632



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 204/450 (45%), Gaps = 79/450 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N  +  L +N H    L         G  P+++TYNI++NC CK G++      
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++     P+  TFN+LI  L   +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 179 TGHTMIALNLFEEMANGN------------------GEIGVV-----------CKPNTVT 209
            G   +AL LFEEM N                    G++G             C  +T+T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+TIIDGLCK+  +++A+ +F QM  + I+ + +T+N+LI GLC     ++A  L  +M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK-- 327
            +G+QP+ +T+N I+   CK   + +A+ +L+ M   G   +  TY TL++G C  G+  
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583

Query: 328 ---------------------------------INRAEELFGSMESMGCKHDDVSYNILI 354
                                            I  A  LF  M  +G   D ++Y I+ 
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643

Query: 355 NGYCKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ---- 409
            G C+    ++EA     EMV KG  P   ++  L  GL  +   ++ ++  + +     
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703

Query: 410 -RDGVAADTRTY---TTFIDGLCKNGYIIE 435
            R+   +  R Y     F D L   G  +E
Sbjct: 704 LRESDVSAIRGYLKIRKFYDALATFGRFLE 733



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 14/239 (5%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P    ++N ++  L K    +       +++  G+  N  T+N LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              +++     PN  T+NS++     +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T +AL +   M           +P    Y+ ++  L +   +  A +LF +M +  
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 238 INPDVVTYNSLIHGLCHAND-WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             PD +TY  +  GLC       EA    +EM+D+G  P   +F ++ + L  N  MD+
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL-NLGMDD 689


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 158/501 (31%), Positives = 258/501 (51%), Gaps = 13/501 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN L+ +L +     T       +++ G+ P+  T+  L+  F + G +      
Sbjct: 87  PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+L    +    T N LI G     R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             H   AL + + M     +      P+  TY+ +++ LCK G +++AK +  QM D   
Sbjct: 207 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 260

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ T+N+LI  LC  N   EA  L  ++  +GV P V TFN++++ LCK      A R
Sbjct: 261 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 320

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M   G  P+  TYNTL+D  C +GK+ +A +L   MES GC    ++YN +I+G C
Sbjct: 321 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 380

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M  +G+  +  
Sbjct: 381 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 440

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + +   CK G I +A ++  T+     E+D+  Y  LI+GLCK+GR + A ++   +
Sbjct: 441 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P    YN ++Q L     +  A  LF +M E    PD +T+ ++  G  R   P
Sbjct: 501 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 560

Query: 539 SK-VNELLHKMKEKKVMPDAS 558
            K   + + +M +K  +P+ S
Sbjct: 561 IKEAFDFMLEMVDKGFIPEFS 581



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/501 (31%), Positives = 245/501 (48%), Gaps = 9/501 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +   YN L+N   +  ++ L    +  +      P+  TFN+L+K L    ++  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ + G  P+  T+ TL+ G    G    AL +   M     E+G  C    VT 
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML----EMG--CSATKVTV 162

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A ++   M+ 
Sbjct: 163 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 222

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P V T+N++++ LCKN +++EA  +L+ MV RG  P+  T+NTL+   C   ++  
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  VTYNTL  
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L  + ++  AL L  +M+  G    T TY T IDGLCK   I EA E+F  + +     
Sbjct: 343 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 402

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   +N LIDGLCK  ++  A+EL   +    L PN +TYN ++   C  G + KA D+ 
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 462

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M  N    DV+T+  LI+G  +        ++L  M+ K + P     + V+  L + 
Sbjct: 463 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 522

Query: 571 EISLKSLPSFLVQERQGEVGE 591
                +L  F       EVGE
Sbjct: 523 NNIRDALSLF---REMAEVGE 540



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 206/451 (45%), Gaps = 81/451 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N  +  L +N H    L         G  P+++TYNI++NC CK G++      
Sbjct: 192 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 251

Query: 119 FGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             +++ R C  P+  TFN+LI  L   +R+ EA  L  ++   G  P+V T+N LIN LC
Sbjct: 252 LNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALC 310

Query: 178 RTGHTMIALNLFEEMANGN------------------GEIGVV-----------CKPNTV 208
           + G   +AL LFEEM N                    G++G             C  +T+
Sbjct: 311 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI 370

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+TIIDGLCK+  +++A+ +F QM  + I+ + +T+N+LI GLC     ++A  L  +M
Sbjct: 371 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM 430

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK- 327
           + +G+QP+ +T+N I+   CK   + +A+ +L+ M   G   +  TY TL++G C  G+ 
Sbjct: 431 ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRT 490

Query: 328 ----------------------------------INRAEELFGSMESMGCKHDDVSYNIL 353
                                             I  A  LF  M  +G   D ++Y I+
Sbjct: 491 QVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 550

Query: 354 INGYCKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ--- 409
             G C+    ++EA     EMV KG  P   ++  L  GL  +   ++ ++  + +    
Sbjct: 551 FRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKV 610

Query: 410 --RDGVAADTRTY---TTFIDGLCKNGYIIE 435
             R+   +  R Y     F D L   G  +E
Sbjct: 611 DLRESDVSAIRGYLKIRKFYDALATFGRFLE 641



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 14/239 (5%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P    ++N ++  L K    +       +++  G+  N  T+N LI+  CK  ++   F 
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              +++     PN  T+NS++     +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 426 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T +AL +   M           +P    Y+ ++  L +   +  A +LF +M +  
Sbjct: 486 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539

Query: 238 INPDVVTYNSLIHGLCHAND-WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             PD +TY  +  GLC       EA    +EM+D+G  P   +F ++ + L  N  MD+
Sbjct: 540 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL-NLGMDD 597


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 161/534 (30%), Positives = 273/534 (51%), Gaps = 17/534 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNI 101
           ++ + I + ML+   +P   S FNIL+ S A+ +  D  +    +       P+L+T+ I
Sbjct: 136 SQCYAIHEEMLKAGIAPNTFS-FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLI 194

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           L++C CK G     F  F  ++   F P + A   ++++ L    R+ EA  +F +++  
Sbjct: 195 LVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC 254

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+ I YNT+I+GL + GH   AL + + M      +   C P  VTY  +++ LCK 
Sbjct: 255 GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM------LAKACVPTEVTYGILVNSLCKA 308

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A+ LF  M      P+ V Y SLIHG   +    EA  LF EM++ G +P V+T 
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            V++D LCK+   ++A++  + M++ G +PN  TY T++ G   +G++  A  +   M +
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC  D V+Y  L++G+CK   ++EA  L  E+      P +  Y++L  GL +   VE+
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVEN 488

Query: 401 ALK-LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            L  LF++ +      D     + I GLCK G + EA  +F+ +    C+ D   YN LI
Sbjct: 489 TLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 460 DGLCKS--GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +GLC+S   R++ A+ L   L     +P+ VTY  +  GLC  G++D+A  +  +     
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              DV+ +  L  G     +  +   L  +M  +   PDA+    +++ L+K +
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGK 662



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 183/572 (31%), Positives = 265/572 (46%), Gaps = 65/572 (11%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++  LAK  H    L       A    P   TY IL+N  CK G +     
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  +  S F PN+  + SLI G     R+ EA +LF ++   G  P+VIT+  +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII----------------------- 214
           ++G+   A   FEEM  G       CKPN VTY+TII                       
Sbjct: 377 KSGNFEQAAKSFEEMMRGG------CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 215 ------------DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA------- 255
                       DG CK G +D+A  L  ++   + +P++  Y+SL+ GLC         
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
           +D  E  +   E +D G+  S++        LCK  ++DEA R+   MV  G +P+A TY
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIV------GLCKTGRLDEACRIFQRMVSEGCKPDATTY 544

Query: 316 NTLMDGFCLM--GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           N L++G C     ++ RA  L   +E +G   D V+Y  L  G CK  EV+ A+ +  E 
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+G    VV Y  L  GL    QV+ A+ LF EM R G A D   Y   I+GL K   +
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNI 492
            +A + F  +     +  +  Y  L+  LC +G +  A+  F   L  G LV +V+ Y+ 
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDA 724

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G C   ++D A  LF DM      P  +T   L  G +R  +  K  ELL +M    
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
             P A+  + ++D L K++ S K L   LVQE
Sbjct: 785 SPPHAATFTAILDGLRKSDESGKLLK--LVQE 814



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 236/473 (49%), Gaps = 12/473 (2%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            G   +++TYN L+N        S  +     +L++   PN  +FN LI+      R  +
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A   F  +K   C+P++ T+  L++ LC+ G    A  +F EM      +G V  P+   
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRAL 227

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++ ++  L K   V +A+ +F QM+     PD + YN++I GL  A    EA ++   M+
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +   P+ VT+ ++++ LCK   ++ A  L  +M   G RPN+  Y +L+ GF   G++ 
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  M   G + D +++ ++I+G CK+   E+A   + EM+  G KP VVTY T+ 
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +I +V +A ++   M   G   D+ TY   +DG CK G + EA +L   L      
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467

Query: 450 LDIQAYNCLIDGLCKSGRLKFAW-ELFCSLPHGV--LVPNVVTYNIMIQGLCNDGQMDKA 506
            ++Q Y+ L+ GLC  G ++    +LF         L P +     +I GLC  G++D+A
Sbjct: 468 PNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCS--IIVGLCKTGRLDEA 525

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRI--NEPSKVNELLHKMKEKKVMPDA 557
             +F  M      PD  T+++LI+G  R   N   +   LLH ++    +PDA
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDA 578



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 1/299 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G Q  V T+N +M+ L   +   +   + + M++ G+ PN  ++N L+  F    + + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFL 390
              F  M+   CK D  ++ IL++  CK    E+A  ++ EM++ G + P    +  +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +V+ A ++F +M++ G   D   Y T IDGL K G+  EA+++   +    C  
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               Y  L++ LCK+G L+ A ELF  +      PN V Y  +I G    G+M +A  LF
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +M E    PDVIT  ++I G  +     +  +   +M      P+    + ++  L K
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 1/284 (0%)

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           Q G + +  TYN LM+        ++   +   M   G   +  S+NILI  + + +  +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTRTYTTF 423
           +A++ +  M  K  KP + T+  L   L +    E A ++F EM   G V  D   +T  
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +  L K   + EA E+F  +       D  AYN +IDGL K+G  + A ++  ++     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP  VTY I++  LC  G +++A +LF  M  +   P+ + +  LIHGF +     +   
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           L  +M E    PD    ++++D L K+    ++  SF    R G
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 165/471 (35%), Positives = 248/471 (52%), Gaps = 9/471 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+L  YN ++         S   +    +LR    PN  T+N L++ L A  +  EA
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRL-LASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 151 AALF-TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
             +    ++  GC PNV+TYNTL+   CR G    A  L   M  G    GV  +P+ VT
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG----GV--RPSLVT 227

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++T+++GLCK G ++ A+ +F +M  E + PD V+YN+L+ G C A   +EA  +F EM 
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA 287

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +GV P VVTF  ++  +C+   ++ A  L+  M +RG+R N  T+  L+DGFC  G ++
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLD 347

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A      M     +   V YN+LINGYCK   ++EA  L  EM +KG+KP VVTY+T+ 
Sbjct: 348 DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL 407

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +I   + A +L  +M + GV  D  TY++ I GLC+   + +A ELF  +  L  +
Sbjct: 408 SGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQ 467

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  LIDG CK G ++ A  L   +    ++P+VVTY+++I GL    +  +A+ L
Sbjct: 468 PDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
              +      PD I ++ L+H   R  E   V  LL     K +M  A  V
Sbjct: 528 LFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVVALLKGFSMKGLMNQADKV 577



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 269/558 (48%), Gaps = 62/558 (11%)

Query: 65  PPVSSFNILL-----ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P + ++N +L     ASL   +     +   G+ PN+YTYNIL+   C  G+        
Sbjct: 118 PSLLAYNAVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVV 177

Query: 120 GRILRSCF-TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           G  +R     PN  T+N+L+        +  A  L   ++  G  P+++T+NT++NGLC+
Sbjct: 178 GDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCK 237

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +F+EMA           P+ V+Y+T++ G CK G + +A A+F +M  + +
Sbjct: 238 AGRMEDARKMFDEMAREG------LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVT+ SLIH +C A +   A  L  +M ++G++ +  TF  ++D  C+N  +D+A  
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL 351

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            +  M +  ++P+   YN L++G+C +G+++ A EL   ME+ G K D V+Y+ +++GYC
Sbjct: 352 AMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYC 411

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  + + A  L R+M+ KG+ P  +TY++L  GL E  ++  A +LF++M + G+  D  
Sbjct: 412 KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF 471

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYTT IDG CK G + +A+ L   +       D+  Y+ LIDGL KS R K A  L   L
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531

Query: 479 PHGVLVPNVV-------------------------------------------------- 488
            +   VP+ +                                                  
Sbjct: 532 YYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGS 591

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            Y+++I G C  G + KA      +     +P+  +   L+ G        + + ++ ++
Sbjct: 592 VYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651

Query: 549 KEKKVMPDASIVSIVVDL 566
                + DA     ++DL
Sbjct: 652 LNCCSLADAETSKALIDL 669



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 220/497 (44%), Gaps = 85/497 (17%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNIL 102
           EA  +    +R     P V ++N L+A+  +    D        +   G+ P+L T+N +
Sbjct: 172 EALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTV 231

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N  CK GR+      F  + R   TP+  ++N+L+ G      + EA A+F ++   G 
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMA--------------------NGNGEIGVV 202
            P+V+T+ +LI+ +CR G+   A+ L  +M                     NG  +  ++
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL 351

Query: 203 C---------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     +P+ V Y+ +I+G CK G +D+A+ L  +M+ + + PDVVTY++++ G C
Sbjct: 352 AMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYC 411

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
              D + A  L  +M+ +GV P  +T++ ++  LC+ R++ +A  L + M+Q G++P+  
Sbjct: 412 KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF 471

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL---- 369
           TY TL+DG C  G + +A  L   M   G   D V+Y++LI+G  K+   +EA  L    
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531

Query: 370 ----------------------------------------------YREMVSKGIKPTVV 383
                                                         Y+ M+ +  K    
Sbjct: 532 YYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGS 591

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y+ L  G      +  AL    ++ R G + ++ +  + + GL + G  +EA  + + L
Sbjct: 592 VYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651

Query: 444 RILKCELDIQAYNCLID 460
                  D +    LID
Sbjct: 652 LNCCSLADAETSKALID 668



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 213/433 (49%), Gaps = 30/433 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F  M +     P V +F  L+ ++ +  + +       ++   GL  N +T+  
Sbjct: 277 HEALAVFAEMAQ-KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ FC+ G +    +A   +      P+   +N LI G     R+ EA  L  +++A G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+V+TY+T+++G C+ G T  A  L  +M     + GVV  P+ +TYS++I GLC+E 
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKML----KKGVV--PDAITYSSLIRGLCEER 449

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +  A  LF +M    + PD  TY +LI G C   +  +A  L  EM+ +GV P VVT++
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS 509

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM---------------DGFCLMG 326
           V++D L K+ +  EA RLL  +      P+   Y  LM                GF + G
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKG 569

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +N+A++++ SM     K D   Y++LI+G+C+   + +ALS +++++  G  P   +  
Sbjct: 570 LMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTI 629

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L  GLFE      A  +  E+      AD  T    ID   K G  +   +    L + 
Sbjct: 630 SLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEG--VGYFQAQGELCMQ 687

Query: 447 KCELDIQAYNCLI 459
           K  L ++ +NC++
Sbjct: 688 KPALFVEHWNCMM 700



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 35/213 (16%)

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P+++ YN + L L +   +  A +L   M RDGVA +  TY   +  LC  G   EA
Sbjct: 115 GYAPSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           + +           D++   C                           PNVVTYN ++  
Sbjct: 174 LGVVGD--------DMRGAGC--------------------------APNVVTYNTLVAA 199

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C  G++D A  L   M E    P ++TF+ +++G  +        ++  +M  + + PD
Sbjct: 200 FCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPD 259

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
               + +V    K     ++L  F    ++G V
Sbjct: 260 GVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 263/511 (51%), Gaps = 13/511 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN L+ +L +     T       +++ G+ P+  T+  L+  F + G +      
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+L    +    T N LI G     R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             H   AL + + M     +      P+  TY+ +++ LCK G +++AK +  QM D   
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ T+N+LI  LC  N   EA  L  ++  +GV P V TFN++++ LCK      A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M   G  P+  TYNTL+D  C +GK+ +A +L   MES GC    ++YN +I+G C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L ++M  +G+  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + +   CK G I +A ++  T+     E+D+  Y  LI+GLCK+GR + A ++   +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P    YN ++Q L     +  A  LF +M E    PD +T+ ++  G  R   P
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 652

Query: 539 SK-VNELLHKMKEKKVMPDASIVSIVVDLLV 568
            K   + + +M +K  +P+ S   ++ + L+
Sbjct: 653 IKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/501 (31%), Positives = 245/501 (48%), Gaps = 9/501 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +   YN L+N   +  ++ L    +  +      P+  TFN+L+K L    ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ + G  P+  T+ TL+ G    G    AL +   M     E+G  C    VT 
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML----EMG--CSATKVTV 254

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A ++   M+ 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P V T+N++++ LCKN +++EA  +L+ MV RG  P+  T+NTL+   C   ++  
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  VTYNTL  
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L  + ++  AL L  +M+  G    T TY T IDGLCK   I EA E+F  + +     
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   +N LIDGLCK  ++  A+EL   +    L PN +TYN ++   C  G + KA D+ 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M  N    DV+T+  LI+G  +        ++L  M+ K + P     + V+  L + 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 571 EISLKSLPSFLVQERQGEVGE 591
                +L  F       EVGE
Sbjct: 615 NNIRDALSLF---REMAEVGE 632



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 204/450 (45%), Gaps = 79/450 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N  +  L +N H    L         G  P+++TYNI++NC CK G++      
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++     P+  TFN+LI  L   +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 179 TGHTMIALNLFEEMANGN------------------GEIGVV-----------CKPNTVT 209
            G   +AL LFEEM N                    G++G             C  +T+T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+TIIDGLCK+  +++A+ +F QM  + I+ + +T+N+LI GLC     ++A  L  +M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMI 523

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK-- 327
            +G+QP+ +T+N I+   CK   + +A+ +L+ M   G   +  TY TL++G C  G+  
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583

Query: 328 ---------------------------------INRAEELFGSMESMGCKHDDVSYNILI 354
                                            I  A  LF  M  +G   D ++Y I+ 
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643

Query: 355 NGYCKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ---- 409
            G C+    ++EA     EMV KG  P   ++  L  GL  +   ++ ++  + +     
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703

Query: 410 -RDGVAADTRTY---TTFIDGLCKNGYIIE 435
            R+   +  R Y     F D L   G  +E
Sbjct: 704 LRESDVSAIRGYLKIRKFYDALATFGRFLE 733



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 14/239 (5%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P    ++N ++  L K    +       +++  G+  N  T+N LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              +++     PN  T+NS++     +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T +AL +   M           +P    Y+ ++  L +   +  A +LF +M +  
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 238 INPDVVTYNSLIHGLCHAND-WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             PD +TY  +  GLC       EA    +EM+D+G  P   +F ++ + L  N  MD+
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL-NLGMDD 689


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 175/574 (30%), Positives = 290/574 (50%), Gaps = 54/574 (9%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           REG+++     +A  +F  M++     P V ++  ++ +L K +  D       ++ + G
Sbjct: 239 REGEVS-----KACNLFHEMMQ-QGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
             PN  TYN +I+ +   G+       F  +      PN  T NS +  L    +  EAA
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
             F  + A G +PN++TY+ L++G    G  +  LNLF  M  GNG +      +   ++
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM-EGNGIVA-----DQRVFN 406

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY-------------------------- 245
            +ID   K G +D+   +F QM+++ + PD  TY                          
Sbjct: 407 IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 246 ---------NSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDE 295
                    +SLI G C   +  +AK L  EMM +G+ +P++V FN I++ LCK  ++ E
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  + D ++  G RP+  T+N+L+DG+ L+GKI +A  +  +M S G + D VSYN LI+
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLID 586

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           GYC+N  +++ L L+ EM+SKG+KPT +TY  +  GLF   +   A K+  EM   G   
Sbjct: 587 GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  T    + GLC+N    EA+ +F+ L  +  + +I   N +ID + K  + + A ELF
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELF 706

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            S+    LVPN  TY +MI+ L  +G +++A ++F  ME++  AP     + +I   +  
Sbjct: 707 DSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEK 766

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            E  K    + K+  K++  +AS VS+++ L  +
Sbjct: 767 GEIVKAGNYMFKVDGKRISLEASTVSLLMALFSR 800



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 189/672 (28%), Positives = 299/672 (44%), Gaps = 117/672 (17%)

Query: 16  APISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLA 75
           +PI+AF +             T       ++  +A  +FD +LR    P P  S N    
Sbjct: 34  SPIAAFGA------------ATERARAGTLSTEDAHHLFDELLR-QTIPVPERSLNGFFT 80

Query: 76  SLAKNKH----YDTRLNATGLF--------------PNLYTYNILINCFCKIGRVSLGFI 117
           +LA+        D    A  LF              P + TYNIL++C C+  R ++GF 
Sbjct: 81  ALARAPSSAACRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFA 140

Query: 118 AFGRILRSCFT------------------------------------PNAATFNSLIKGL 141
            FGR L++                                       P+  ++N+++K L
Sbjct: 141 LFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTL 200

Query: 142 HAESRIMEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
             +SR   A  L   +  K+ GC PNV+TYNT+I+GL R G    A NLF EM     + 
Sbjct: 201 CEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMM----QQ 256

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GVV  P+ VTY++IID LCK   +DKA+ +  QM      P+ VTYN +IHG   +  W 
Sbjct: 257 GVV--PDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWK 314

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           E   +F EM  QG+ P++VT N  M  LCK+ K  EA+   D M  +G +PN  TY+ L+
Sbjct: 315 ETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLL 374

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
            G+   G       LF SME  G   D   +NI+I+ Y K   ++E + ++ +M  +G+ 
Sbjct: 375 HGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVI 434

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG------------- 426
           P   TY  +      + ++  A+  F++M   G+  +   Y + I G             
Sbjct: 435 PDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKEL 494

Query: 427 -----------------------LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
                                  LCK G ++EA ++F  +  +    D+  +N LIDG  
Sbjct: 495 VSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYG 554

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G+++ A+ +  ++    + P+VV+YN +I G C +G++D    LF +M      P  I
Sbjct: 555 LVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTI 614

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           T+ +++HG           ++ H+M E     D S   I++  L +N    +++  F   
Sbjct: 615 TYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMF--- 671

Query: 584 ERQGEVGESNVK 595
               ++G  NVK
Sbjct: 672 ---KKLGAMNVK 680



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 190/407 (46%), Gaps = 36/407 (8%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           FNI++ +  K    D      T++   G+ P+  TY I+I  F ++GR++     F +++
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 182
                P    ++SLI+G      +++A  L +++ + G   PN++ +N++IN LC+ G  
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524

Query: 183 MIALNLFE---------------EMANGNGEIGVVCK--------------PNTVTYSTI 213
           + A ++F+                + +G G +G + K              P+ V+Y+T+
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDG C+ G +D    LF +M  + + P  +TY  ++HGL +      AK++  EM++ G 
Sbjct: 585 IDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
              + T  +I+  LC+N   DEA  +   +    V+ N    NT++D    + K   A+E
Sbjct: 645 TMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKE 704

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           LF S+ + G   +  +Y ++I    K   VEEA +++  M   G  P+    N +   L 
Sbjct: 705 LFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLL 764

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           E  ++  A     ++    ++ +  T +  +    + G   E V+L 
Sbjct: 765 EKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 48/298 (16%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNIL 102
           EA  IFD+++ +   P  V +FN L+        + K       + + G+ P++ +YN L
Sbjct: 526 EAHDIFDFVIHIGERPD-VITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM-------------- 148
           I+ +C+ GR+  G I FG +L     P   T+  ++ GL  + R +              
Sbjct: 585 IDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644

Query: 149 ---------------------EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
                                EA A+F KL A   + N+   NT+I+ + +      A  
Sbjct: 645 TMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKE 704

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           LF+ ++      G+V  PN  TY  +I  L KEG V++A  +F  M+     P     N 
Sbjct: 705 LFDSIS----ATGLV--PNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNY 758

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           +I  L    +  +A     ++  + +     T +++M    +  K  E  +LL    Q
Sbjct: 759 IIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLLPAKYQ 816


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 164/509 (32%), Positives = 261/509 (51%), Gaps = 64/509 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P+L TY 
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI C C+ GR+ LGF A G +++  F   A TF  L+K                     
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLK--------------------- 130

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
                         GLC    T  A+++         E+G  C PN  +Y+ +++GLC E
Sbjct: 131 --------------GLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNNLLNGLCDE 171

Query: 221 GFVDKAKALFLQMKDENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
               +A  L   M D+      PDVV+Y ++I+G     D ++A   + EM+D+G+ P V
Sbjct: 172 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDV 231

Query: 278 VTFNVIMDELCKNRKMD------------EASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           VT++ I+  LCK + MD            E+ +L DLMV+ GV+P+  TY+TL+DG+CL 
Sbjct: 232 VTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 291

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK++ A +L   M S+G K + V+Y+ LINGYCK   +E+AL L++EM S G+ P ++TY
Sbjct: 292 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 351

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  GLF+  +   A +L+  +   G   +  TY   + GLCKN    +A+++F+ L +
Sbjct: 352 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 411

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +  +L+ + +N +ID L K GR   A +LF +     LVPN  TY +M + +   G +++
Sbjct: 412 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 471

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              LFL ME+N    D    + ++   ++
Sbjct: 472 LDQLFLSMEDNGCTVDSGMLNFIVRELLQ 500



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 173/349 (49%), Gaps = 27/349 (7%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + PD+ TY  LI   C A   +        ++ +G +   +TF  ++  LC +++  +
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM---ESMGCKHDDVSYN 351
           A  + L  M + G  PN  +YN L++G C   +   A EL   M      G   D VSY 
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+ K  + ++A S Y EM+ +GI P VVTY+++   L +                 
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK----------------- 243

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G A D + ++      CK G +IE+ +LF  +  +  + DI  Y+ LIDG C +G++  A
Sbjct: 244 GQAMD-KPWSH-----CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 297

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +L   +    L PN VTY+ +I G C   +M+ A  LF +ME +  +PD+IT+++++ G
Sbjct: 298 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG 357

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +    +   EL  ++ E     + S  +I++  L KN+++  +L  F
Sbjct: 358 LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 406



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 31/313 (9%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG---VRPNACTYN 316
           +A+ +F E++ +G   S+   N  + ++ ++      SR  + M + G   V P+ CTY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGADEVTPDLCTYG 91

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY-REMVS 375
            L+   C  G+++      G++   G + + +++  L+ G C +K   +A+ +  R M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD---GVAADTRTYTTFIDGLCKNGY 432
            G  P V +YN L  GL + ++ + AL+L   M  D   G   D  +YTT I+G  K G 
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             +A   +  +       D+  Y+ +I  LCK   +   W       H            
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWS------H------------ 253

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
                C +G++ ++  LF  M      PD+IT+  LI G+    +  +  +LL  M    
Sbjct: 254 -----CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 308

Query: 553 VMPDASIVSIVVD 565
           + P+    S +++
Sbjct: 309 LKPNTVTYSTLIN 321


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 164/509 (32%), Positives = 261/509 (51%), Gaps = 64/509 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + P+L TY 
Sbjct: 33  DARHVFDELLR-RGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI C C+ GR+ LGF A G +++  F   A TF  L+K                     
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLK--------------------- 130

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
                         GLC    T  A+++         E+G  C PN  +Y+ +++GLC E
Sbjct: 131 --------------GLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNNLLNGLCDE 171

Query: 221 GFVDKAKALFLQMKDENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
               +A  L   M D+      PDVV+Y ++I+G     D ++A   + EM+D+G+ P V
Sbjct: 172 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDV 231

Query: 278 VTFNVIMDELCKNRKMD------------EASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           VT++ I+  LCK + MD            E+ +L DLMV+ GV+P+  TY+TL+DG+CL 
Sbjct: 232 VTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 291

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK++ A +L   M S+G K + V+Y+ LINGYCK   +E+AL L++EM S G+ P ++TY
Sbjct: 292 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 351

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  GLF+  +   A +L+  +   G   +  TY   + GLCKN    +A+++F+ L +
Sbjct: 352 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 411

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +  +L+ + +N +ID L K GR   A +LF +     LVPN  TY +M + +   G +++
Sbjct: 412 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 471

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              LFL ME+N    D    + ++   ++
Sbjct: 472 LDQLFLSMEDNGCTVDSGMLNFIVRELLQ 500



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 173/349 (49%), Gaps = 27/349 (7%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + PD+ TY  LI   C A   +        ++ +G +   +TF  ++  LC +++  +
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM---ESMGCKHDDVSYN 351
           A  + L  M + G  PN  +YN L++G C   +   A EL   M      G   D VSY 
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+ K  + ++A S Y EM+ +GI P VVTY+++   L +                 
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK----------------- 243

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G A D + ++      CK G +IE+ +LF  +  +  + DI  Y+ LIDG C +G++  A
Sbjct: 244 GQAMD-KPWSH-----CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 297

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +L   +    L PN VTY+ +I G C   +M+ A  LF +ME +  +PD+IT+++++ G
Sbjct: 298 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG 357

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +    +   EL  ++ E     + S  +I++  L KN+++  +L  F
Sbjct: 358 LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 406



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 31/313 (9%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG---VRPNACTYN 316
           +A+ +F E++ +G   S+   N  + ++ ++      SR  + M + G   V P+ CTY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRY-NRMARAGADEVTPDLCTYG 91

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY-REMVS 375
            L+   C  G+++      G++   G + + +++  L+ G C +K   +A+ +  R M  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD---GVAADTRTYTTFIDGLCKNGY 432
            G  P V +YN L  GL + ++ + AL+L   M  D   G   D  +YTT I+G  K G 
Sbjct: 152 LGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             +A   +  +       D+  Y+ +I  LCK   +   W       H            
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWS------H------------ 253

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
                C +G++ ++  LF  M      PD+IT+  LI G+    +  +  +LL  M    
Sbjct: 254 -----CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 308

Query: 553 VMPDASIVSIVVD 565
           + P+    S +++
Sbjct: 309 LKPNTVTYSTLIN 321


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/531 (31%), Positives = 269/531 (50%), Gaps = 29/531 (5%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYDT-------RLNATGLFPNLYTYNILINCFCK 108
           ++ + H   P V S+N +L +  ++K   +        +  + + PN++TYNILI  FC 
Sbjct: 158 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 217

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            G + +    F ++      PN  T+N+LI G     +I +   L   +   G EPN+I+
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN +INGLCR G       +  EM      +      + VTY+T+I G CKEG   +A  
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSL------DEVTYNTLIKGYCKEGNFHQALV 331

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +  +M    + P V+TY SLIH +C A + N A     +M  +G+ P+  T+  ++D   
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +   M+EA R+L  M   G  P+  TYN L++G C+ GK+  A  +   M+  G   D V
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           SY+ +++G+C++ +V+EAL + REMV KGIKP  +TY++L  G  E  + + A  L++EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            R G+  D  TYT  I+  C  G + +A++L   +       D+  Y+ LI+GL K  R 
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQ---------------GLCNDGQMDKARDLFLDM 513
           + A  L   L +   VP+ VTY+ +I+               G C  G M +A  +F  M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM-KEKKVMPDASIVSIV 563
                 PD   ++++IHG  R  +  K   L  +M K   ++   +++++V
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 263/519 (50%), Gaps = 28/519 (5%)

Query: 68  SSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGR-VSLGFIAFG 120
           S F++++ S ++    D  L+      A G  P + +YN +++   +  R +S     F 
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +L S  +PN  T+N LI+G      I  A  LF K++  GC PNV+TYNTLI+G C+  
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                  L   MA    E      PN ++Y+ +I+GLC+EG + +   +  +M     + 
Sbjct: 255 KIDDGFKLLRSMALKGLE------PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D VTYN+LI G C   ++++A  +  EM+  G+ PSV+T+  ++  +CK   M+ A   L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M  RG+ PN  TY TL+DGF   G +N A  +   M   G     V+YN LING+C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++E+A+++  +M  KG+ P VV+Y+T+  G    + V+ AL++  EM   G+  DT TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           ++ I G C+     EA +L+  +  +    D   Y  LI+  C  G L+ A +L   +  
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH---------- 530
             ++P+VVTY+++I GL    +  +A+ L L +    + P  +T+  LI           
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608

Query: 531 -----GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
                GF      ++ +++   M  K   PD +  +I++
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 260/490 (53%), Gaps = 39/490 (7%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLF 93
           G+I+V     A  +FD M       P V ++N L+    K +  D        +   GL 
Sbjct: 219 GNIDV-----ALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PNL +YN++IN  C+ GR+         + R  ++ +  T+N+LIKG   E    +A  +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   G  P+VITY +LI+ +C+ G+   A+   ++M      +  +C PN  TY+T+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNERTYTTL 386

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +DG  ++G++++A  +  +M D   +P VVTYN+LI+G C      +A  +  +M ++G+
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VV+++ ++   C++  +DEA R+   MV++G++P+  TY++L+ GFC   +   A +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L+  M  +G   D+ +Y  LIN YC   ++E+AL L+ EMV KG+ P VVTY+ L  GL 
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 394 EIHQVEHA----LKLFDEMQRDGVAADTRTYT--------------TFIDGLCKNGYIIE 435
           +  +   A    LKLF E   + V +D   +T              + I G C  G + E
Sbjct: 567 KQSRTREAKRLLLKLFYE---ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A ++F ++     + D  AYN +I G C++G ++ A+ L+  +     + + VT   +++
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683

Query: 496 GLCNDGQMDK 505
            L  +G++++
Sbjct: 684 ALHKEGKVNE 693



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 204/402 (50%), Gaps = 36/402 (8%)

Query: 205 PNTVTYSTIIDGLCKEGF-VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           P  ++Y+ ++D   +    +  A+ +F +M +  ++P+V TYN LI G C A + + A  
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           LF +M  +G  P+VVT+N ++D  CK RK+D+  +LL  M  +G+ PN  +YN +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G++     +   M   G   D+V+YN LI GYCK     +AL ++ EM+  G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY +L   + +   +  A++  D+M+  G+  + RTYTT +DG  + GY+ EA  + R +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV--------------- 488
                   +  YN LI+G C +G+++ A  +   +    L P+VV               
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466

Query: 489 --------------------TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
                               TY+ +IQG C   +  +A DL+ +M      PD  T+  L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           I+ +    +  K  +L ++M EK V+PD    S++++ L K 
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 174/538 (32%), Positives = 274/538 (50%), Gaps = 39/538 (7%)

Query: 69  SFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           S N LL  LAK          Y   LN +G+ P+L T+N LIN   K G+V    +   +
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLN-SGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           I +   +P+  T+ SLI G H  +R ++ A  +F ++   GC+PN +TY+TLINGLC  G
Sbjct: 224 IFQYDLSPDVFTYTSLILG-HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 282

Query: 181 HTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVTYS 211
               AL++ EEM     E  V                              C+PN  TY+
Sbjct: 283 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I GL + G ++ A  L+ +M  E + P+ VTYN+LI+ LC    ++ A ++F  M   
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G   +  T+N I+  LC    +++A  L + M++ G  P   TYNTL++G+   G +N A
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M+  GC+ D+ +YN L++G+ K  ++E A   ++EMV  G+ P  V+Y  L  G
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  +V+ AL L   M+  G   +  +Y   I+GL K     EA ++   +       +
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  LIDGLC++GR +FA+++F  +     +PN+ TY+ +I GLC +G+ D+A  L  
Sbjct: 583 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK 642

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +ME    APD +TF  LI GF+ +        LL +M +    P+    S+++  L K
Sbjct: 643 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/545 (29%), Positives = 266/545 (48%), Gaps = 48/545 (8%)

Query: 66  PVSSFNILLASLAKNKHYDTR-------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P     IL+    +N+    R       ++  G   +LY+ N L+    K   V      
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           + ++L S   P+  TFN+LI  L  + ++ EA  + +++  +   P+V TY +LI G CR
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             +  +A  +F+ M          C PN+VTYST+I+GLC EG VD+A  +  +M ++ I
Sbjct: 246 NRNLDLAFGVFDRMVKEG------CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P V TY   I  LC      EA  L   M  +G +P+V T+  ++  L +  K++ A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M++ G+ PN  TYN L++  C+ G+ + A ++F  ME  G   +  +YN +I G C
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 419

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++E+A+ L+ +M+  G  PTVVTYNTL  G      V +A +L D M+ +G   D  
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479

Query: 419 T-----------------------------------YTTFIDGLCKNGYIIEAVELFRTL 443
           T                                   YT  IDG  K+G +  A+ L + +
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
             + C  ++++YN +I+GL K  R   A ++   +    L+PNV+TY  +I GLC +G+ 
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             A  +F DME+    P++ T+  LI+G  +  +  +   LL +M+ K + PD    + +
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659

Query: 564 VDLLV 568
           +D  V
Sbjct: 660 IDGFV 664



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/509 (32%), Positives = 252/509 (49%), Gaps = 47/509 (9%)

Query: 65  PPVSSFNILLASLAKN-KHYDTRLNATGLF-----PNLYTYNILINCFCKIGRVSLGFIA 118
           P + +FN L+  L+K  K  +  L  + +F     P+++TY  LI   C+   + L F  
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEA---------------------------- 150
           F R+++    PN+ T+++LI GL  E R+ EA                            
Sbjct: 256 FDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315

Query: 151 -------AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
                    L  ++K  GC PNV TY  LI+GL R G   +A+ L+ +M       G+V 
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV- 370

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PNTVTY+ +I+ LC  G    A  +F  M+      +  TYN +I GLC   D  +A  
Sbjct: 371 -PNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           LF +M+  G  P+VVT+N +++       ++ A+RLLDLM + G  P+  TYN L+ GF 
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             GK+  A   F  M   G   + VSY  LI+G+ K+ +V+ ALSL + M   G  P V 
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +YN +  GL + ++   A K+ D+M   G+  +  TYTT IDGLC+NG    A ++F  +
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
              KC  ++  Y+ LI GLC+ G+   A  L   +    L P+ VT+  +I G    G++
Sbjct: 610 EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRI 669

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGF 532
           D A  L   M +    P+  T+ +L+ G 
Sbjct: 670 DHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 152/454 (33%), Positives = 223/454 (49%), Gaps = 13/454 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILI 103
           AF +FD M++    P  V+ ++ L+  L      D  L+        G+ P +YTY + I
Sbjct: 252 AFGVFDRMVKEGCDPNSVT-YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
              C I           R+ +    PN  T+ +LI GL    ++  A  L+ K+   G  
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN +TYN LIN LC  G    AL +F  M  G+G +      NT TY+ II GLC  G +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDI 424

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           +KA  LF +M      P VVTYN+LI+G     + N A RL   M + G +P   T+N +
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +    K  K++ AS     MV+ G+ PN  +Y  L+DG    GK++ A  L   ME MGC
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +  SYN +ING  K     EA  +  +MV +G+ P V+TY TL  GL    + + A K
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F +M++     +  TY++ I GLC+ G   EA  L + +       D   +  LIDG  
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 664

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
             GR+  A+ L   +      PN  TY+++++GL
Sbjct: 665 VLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 191/377 (50%), Gaps = 12/377 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L++ L++    +       ++   GL PN  TYN LIN  C  GR S     
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +       N  T+N +IKGL     I +A  LF K+   G  P V+TYNTLING   
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A  L + M   NG     C+P+  TY+ ++ G  K G ++ A   F +M +  +
Sbjct: 456 KGNVNNAARLLDLMKE-NG-----CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NP+ V+Y +LI G       + A  L   M + G  P+V ++N +++ L K  +  EA +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + D MV++G+ PN  TY TL+DG C  G+   A ++F  ME   C  +  +Y+ LI G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  + +EA  L +EM  KG+ P  VT+ +L  G   + +++HA  L   M   G   + R
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 419 TYTTFIDGLCKNGYIIE 435
           TY+  + GL K   ++E
Sbjct: 690 TYSVLLKGLQKECLLLE 706



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 153/294 (52%), Gaps = 19/294 (6%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDTRL----NATGLFP 94
           GDI      +A  +F+ ML+M P P  V+   ++   L K N +   RL       G  P
Sbjct: 422 GDIE-----KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           + +TYN L++ F K G++      F  ++     PN  ++ +LI G   + ++  A +L 
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            +++  GC PNV +YN +INGL +      A  + ++M     E G++  PN +TY+T+I
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV----EQGLL--PNVITYTTLI 590

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           DGLC+ G    A  +F  M+     P++ TY+SLI+GLC     +EA+ L  EM  +G+ 
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 650

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF---CLM 325
           P  VTF  ++D      ++D A  LL  MV  G +PN  TY+ L+ G    CL+
Sbjct: 651 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLL 704


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 262/511 (51%), Gaps = 13/511 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN L+ +L +     T       +++ G+ P+  T+  L+  F + G +      
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+L    +    T N LI G     R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             H   AL + + M     +      P+  TY+ +++ LCK G +++AK +  QM D   
Sbjct: 299 NDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC 352

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ T+N+LI  LC  N   EA  L  ++  +GV P V TFN++++ LCK      A R
Sbjct: 353 LPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALR 412

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M   G  P+  TYNTL+D  C +GK+ +A +L   MES GC    ++YN +I+G C
Sbjct: 413 LFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A  L ++M  +G+  +  
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNI 532

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + +   CK G I +A ++  T+     E+D+  Y  LI+GLCK+GR + A ++   +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P    YN ++Q L     +  A  LF +M E    PD +T+ ++  G  R   P
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 652

Query: 539 SK-VNELLHKMKEKKVMPDASIVSIVVDLLV 568
            K   + + +M +K  +P+ S   ++ + L+
Sbjct: 653 IKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 244/501 (48%), Gaps = 9/501 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +   YN L+N   +  ++ L    +  +      P+  TFN+L+K L    ++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ + G  P+  T+ TL+ G    G    AL +   M     E+G  C    VT 
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML----EMG--CSATKVTV 254

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G CK G V+ A     Q   +   PD +TYN+ ++GLC  +    A ++   M+ 
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P V T+N++++ LCKN +++EA  +L+ MV RG  P+  T+NTL+   C   ++  
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   +   G   D  ++NILIN  CK  +   AL L+ EM + G  P  VTYNTL  
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L  + ++  AL L  +M+  G    T TY T IDGLCK   I EA E+F  + +     
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   +N LIDGLCK  ++  A+ L   +    L PN +TYN ++   C  G + KA D+ 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M  N    DV+T+  LI+G  +        ++L  M+ K + P     + V+  L + 
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 571 EISLKSLPSFLVQERQGEVGE 591
                +L  F       EVGE
Sbjct: 615 NNIRDALSLF---REMAEVGE 632



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 204/450 (45%), Gaps = 79/450 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N  +  L +N H    L         G  P+++TYNI++NC CK G++      
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++     P+  TFN+LI  L   +R+ EA  L  ++   G  P+V T+N LIN LC+
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 403

Query: 179 TGHTMIALNLFEEMANGN------------------GEIGVV-----------CKPNTVT 209
            G   +AL LFEEM N                    G++G             C  +T+T
Sbjct: 404 VGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTIT 463

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+TIIDGLCK+  +++A+ +F QM  + I+ + +T+N+LI GLC     ++A  L  +M+
Sbjct: 464 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMI 523

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK-- 327
            +G+QP+ +T+N I+   CK   + +A+ +L+ M   G   +  TY TL++G C  G+  
Sbjct: 524 SEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ 583

Query: 328 ---------------------------------INRAEELFGSMESMGCKHDDVSYNILI 354
                                            I  A  LF  M  +G   D ++Y I+ 
Sbjct: 584 VALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVF 643

Query: 355 NGYCKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ---- 409
            G C+    ++EA     EMV KG  P   ++  L  GL  +   ++ ++  + +     
Sbjct: 644 RGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVD 703

Query: 410 -RDGVAADTRTY---TTFIDGLCKNGYIIE 435
            R+   +  R Y     F D L   G  +E
Sbjct: 704 LRESDVSAIRGYLKIRKFYDALATFGRFLE 733



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 14/239 (5%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P    ++N ++  L K    +       +++  G+  N  T+N LI+  CK  ++   F 
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              +++     PN  T+NS++     +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G T +AL +   M           +P    Y+ ++  L +   +  A +LF +M +  
Sbjct: 578 KAGRTQVALKVLRGMRIKG------MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 238 INPDVVTYNSLIHGLCHAND-WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             PD +TY  +  GLC       EA    +EM+D+G  P   +F ++ + L  N  MD+
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL-NLGMDD 689


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/545 (31%), Positives = 273/545 (50%), Gaps = 43/545 (7%)

Query: 67  VSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLGFI 117
           V ++N LL  L +   +D    A+ +F         P+ +T+ IL+   C+  ++     
Sbjct: 7   VFTYNKLLLQLTREHRHD---KASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             GR+      P+ A +N+LI G        +A     ++    C P V+TY  +++GLC
Sbjct: 64  LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +   T  A+ L +EM +        C PN  TY+ I++GLC+E  +D+AK +  +M    
Sbjct: 124 KAERTRDAVKLLDEMRDKG------CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDVVTYNS I GLC  +  +EA++    M    V P VV++  +++ LCK+  +D AS
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSAS 234

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           R+LD M  RG  P+  TY++L+DGFC  G++ RA  L  SM  +GC+ + V+YN L+   
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG----- 412
            +   + +A  +  EM  +G  P VV+YN    GL +  +V+ A  +FD M   G     
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354

Query: 413 -----VAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSG 466
                +  D   YT  +DGLCK G   EA  LF + L    CE D+  YN ++D  CK  
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414

Query: 467 RLKFAWELFCSLPHGVLVP----NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           ++  A ++     H  ++     NVVT+NI++ GLC D ++  A  + L M +    PD 
Sbjct: 415 QIDKALQI-----HKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 469

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF-- 580
           +T+  L+    +  + +   EL  +  +   +PD    S ++  LV   ++ ++   F  
Sbjct: 470 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 529

Query: 581 LVQER 585
           LV+ R
Sbjct: 530 LVERR 534



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 161/501 (32%), Positives = 248/501 (49%), Gaps = 21/501 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N++TYN L+    +  R       F  ++     P+A TF  L++GL   +++ +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++K  GC P+   YN LI+G  +      A     EM   +      C P  VTY
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH------CLPTVVTY 115

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + I+DGLCK      A  L  +M+D+  +P++ TYN ++ GLC     +EAK++  EM  
Sbjct: 116 TNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV 175

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P VVT+N  +  LCK  ++DEA + L  M    V P+  +Y T+++G C  G ++ 
Sbjct: 176 RGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDS 232

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +   M + GC  D V+Y+ LI+G+CK  EVE A+ L   M+  G +P +V YN+L  
Sbjct: 233 ASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG 292

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE- 449
            L  +  +  A  +  EM+R G   D  +Y   IDGLCK   + +A  +F  +    C  
Sbjct: 293 ALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 352

Query: 450 ---------LDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCN 499
                    +DI  Y  L+DGLCK GR   A  LF   L   +  P+V  YN+M+   C 
Sbjct: 353 NASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 412

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
             Q+DKA  +   M E     +V+T+++L+HG    +  S    +L  M ++  +PD   
Sbjct: 413 RRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 471

Query: 560 VSIVVDLLVKNEISLKSLPSF 580
              +VD + K   S  +L  F
Sbjct: 472 YGTLVDAMCKCGKSAAALELF 492



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 170/342 (49%), Gaps = 25/342 (7%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKI 109
           ++ RM P  P V S+  ++  L K+   D+       ++  G  P++ TY+ LI+ FCK 
Sbjct: 204 FLARM-PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G V         +L+    PN   +NSL+  LH    I +A  +  +++  G  P+V++Y
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII----------DGLCK 219
           N  I+GLC+      A  +F+ M          C PN  +YS +I          DGLCK
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERG------CTPNASSYSMLIVDILLYTVLLDGLCK 376

Query: 220 EGFVDKAKALFLQMKDENI-NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            G  D+A ALF ++ DE I  PDV  YN ++   C     ++A ++  +M+++    +VV
Sbjct: 377 GGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVV 435

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N+++  LC + ++ +A  +L  MV  G  P+  TY TL+D  C  GK   A ELF   
Sbjct: 436 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 495

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
              GC  D V+Y+ LI G       EEA  L+ ++V +   P
Sbjct: 496 VKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVP 537



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 139/300 (46%), Gaps = 25/300 (8%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILI 103
           A  + D ML++   P  V+ +N LL +L +  H          +   G  P++ +YN  I
Sbjct: 268 AMGLLDSMLKLGCRPNMVA-YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 326

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI----------KGLHAESRIMEAAAL 153
           +  CK  RV      F R++    TPNA++++ LI           GL    R  EA AL
Sbjct: 327 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACAL 386

Query: 154 FTK-LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           F+K L    CEP+V  YN +++  C+      AL + ++M   N      C  N VT++ 
Sbjct: 387 FSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN-----CC--NVVTWNI 439

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ GLC +  +  A+ + L M DE   PD VTY +L+  +C       A  LF E +  G
Sbjct: 440 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P VVT++ ++  L      +EA  L   +V+R   P+  T   L     L+ K  +AE
Sbjct: 500 CVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKAE 559



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 3/230 (1%)

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           MG +H+  +YN L+    +    ++A ++++EM+ K  +P   T+  L  GL   +Q+E 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A KL   M+  G   D   Y   I G  K     +A +    +    C   +  Y  ++D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLCK+ R + A +L   +      PN+ TYN++++GLC + ++D+A+ +  +M      P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           DV+T++  I G  + +   +  + L +M    V PD    + V++ L K+
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKS 227


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/519 (29%), Positives = 267/519 (51%), Gaps = 18/519 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EAF + +  +R    P  V+ +N+ +  L K +  D       +++     P   TY  
Sbjct: 24  DEAFSVLERAVRAGCEPDYVT-YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 82

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++   K GR+        +++    +P   T+  +I GL    R+ EA  +F  +   G
Sbjct: 83  LVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 142

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P+   Y  LI GLC++G    A  L++E AN          P+ VTY+++IDGLCK G
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKE-ANARKHHATAV-PDVVTYTSLIDGLCKAG 200

Query: 222 FVDKAKALFLQMKDENIN----PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            + +A+ +F    DE +     PD VTY S+I GLC      E    F EM ++G +P  
Sbjct: 201 RILEARQVF---DDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT+  ++D   K + + +A R+   M+Q G   +  TYN ++DG C  G++  A   F +
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME  GC    V+Y+ L++G+C    V  A+ L+R M+ +G +P +V+YN +  GL    +
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN-GYIIEAVELFRTLRILKCELDIQAYN 456
           +  A   F+++ +  +  D  T+  F+ GLC+    + + VELF ++       ++ +Y+
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYS 437

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+DG+C++G L+ A E+F  +    + P+VV +N +I+ LC  G++D+A ++F ++E  
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 497

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            +APD  ++  L+ G  R     +   L   MK +   P
Sbjct: 498 -SAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 248/483 (51%), Gaps = 18/483 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++  + ++IN  C+  R+   F    R +R+   P+  T+N  I GL    R+ +A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYST 212
             K+    C P  +TY  L++GL + G    A+ + E+M   GN        P   TY+ 
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN-------SPTLKTYTV 117

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDGL K G V++A+ +F+ M      PD   Y +LI GLC +    EA  L+ E   + 
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARK 177

Query: 273 ----VQPSVVTFNVIMDELCKNRKMDEASRLLD-LMVQRGVRPNACTYNTLMDGFCLMGK 327
                 P VVT+  ++D LCK  ++ EA ++ D   V+RG  P+A TY +++DG C +G+
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +    E F  M + G + D V+Y  LI+G+ K K + +A  +YR+M+  G   + VTYN 
Sbjct: 238 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 297

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  GL +  +V  A   F  M+  G  A   TY+  +DG C  G +  AVELFR +    
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           CE ++ +YN +I GLC++G+L  A+  F  L    L P+V T+N  + GLC   ++D   
Sbjct: 358 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ--RLDTVS 415

Query: 508 D---LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           D   LF  M     +P++ ++ +L+ G  R        E+  +M  + V PD  + + ++
Sbjct: 416 DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLI 475

Query: 565 DLL 567
             L
Sbjct: 476 RWL 478



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/444 (33%), Positives = 227/444 (51%), Gaps = 12/444 (2%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +P+   F  +I GL  E R+ EA ++  +    GCEP+ +TYN  I+GLC+      A  
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L ++M          C P TVTY+ ++DGL K G +D+A A+  QM ++  +P + TY  
Sbjct: 64  LLKKMDEKK------CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV 117

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I GL  A    EA+R+F++M+  G +P    +  ++  LCK+ K +EA  L      R 
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARK 177

Query: 308 ----VRPNACTYNTLMDGFCLMGKINRAEELFGSME-SMGCKHDDVSYNILINGYCKNKE 362
                 P+  TY +L+DG C  G+I  A ++F       G   D V+Y  +I+G CK   
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           VEE    + EM ++G +P  VTY  L  G  +   +  A +++ +M + G    T TY  
Sbjct: 238 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 297

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            +DGLCK G + EA   F  +    C   +  Y+ L+DG C  G +  A ELF  +    
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI-RINEPSKV 541
             PN+V+YNI+I+GLC  G++ KA   F  + +    PDV TF+  +HG   R++  S  
Sbjct: 358 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDG 417

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
            EL   M  +   P+    SI++D
Sbjct: 418 VELFESMVSQGTSPNLHSYSILMD 441



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 212/402 (52%), Gaps = 15/402 (3%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P+++ +  +INGLCR      A ++ E            C+P+ VTY+  IDGLCK  
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG------CEPDYVTYNVFIDGLCKAE 56

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A  L  +M ++   P  VTY +L+ GL  A   +EA  +  +M+++G  P++ T+ 
Sbjct: 57  RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYT 116

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++D L K  +++EA R+   M+  G RP+A  Y  L+ G C  GK   A  L+   E+ 
Sbjct: 117 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALY--KEAN 174

Query: 342 GCKH------DDVSYNILINGYCKNKEVEEALSLY-REMVSKGIKPTVVTYNTLFLGLFE 394
             KH      D V+Y  LI+G CK   + EA  ++  E V +G  P  VTY ++  GL +
Sbjct: 175 ARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK 234

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           + +VE   + F EM+  G   D  TY   IDG  K   I +A  ++R +      +    
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN ++DGLCK+GR+  A+  F ++     V  VVTY+ ++ G C++G +  A +LF  M 
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +    P++++++++I G  R  + +K      K+ ++++ PD
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 396



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 203/390 (52%), Gaps = 7/390 (1%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C P+ V ++ +I+GLC+E  +D+A ++  +       PD VTYN  I GLC A   ++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           +L  +M ++   P+ VT+  ++D L K  ++DEA  +L+ MV++G  P   TY  ++DG 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG----I 378
              G++  A  +F  M   GC+ D   Y  LI G CK+ + EEA +LY+E  ++      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLF-DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
            P VVTY +L  GL +  ++  A ++F DE    G   D  TYT+ IDGLCK G + E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           E F  +R    E D   Y  LIDG  K+  +  A  ++  +     V + VTYNI++ GL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G++ +A   FL MEE      V+T+  L+ GF      S   EL  +M ++   P+ 
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362

Query: 558 SIVSIVVDLLVKNEISLKSLPSF--LVQER 585
              +I++  L +     K+   F  L+Q R
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 171/320 (53%), Gaps = 7/320 (2%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P +V F V+++ LC+ +++DEA  +L+  V+ G  P+  TYN  +DG C   +++ A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M+   C    V+Y  L++G  K   ++EA+++  +MV KG  PT+ TY  +  GL 
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--- 450
           +  +VE A ++F +M  +G   D   YT  I GLCK+G   EA  L++     K      
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 451 -DIQAYNCLIDGLCKSGRLKFAWELFC--SLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            D+  Y  LIDGLCK+GR+  A ++F   ++  G  +P+ VTY  +I GLC  G++++  
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERG-FIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           + F +M      PD +T+  LI GF++     K + +  +M +   +      +I++D L
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 568 VKNEISLKSLPSFLVQERQG 587
            K     ++  +FL  E +G
Sbjct: 303 CKAGRVAEAYATFLAMEERG 322



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 10/267 (3%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G   +  TYNI+++  CK GRV+  +  F  +          T+++L+ G  +E  +  
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  LF ++   GCEPN+++YN +I GLCR G    A   FE++         +C P+  T
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR-----LC-PDVYT 399

Query: 210 YSTIIDGLCKE-GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           ++  + GLC+    V     LF  M  +  +P++ +Y+ L+ G+C A     A  +F EM
Sbjct: 400 FNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREM 459

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + +GV P VV FN ++  LC   ++DEA  +   + +R   P+A +Y +L+DG     ++
Sbjct: 460 VSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERM 518

Query: 329 NRAEELFGSMESMGC--KHDDVSYNIL 353
             A  L   M+  GC  +H D++   L
Sbjct: 519 EEARLLSFHMKLQGCAPRHYDLTVRFL 545



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 40/276 (14%)

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           M C  D V++ ++ING C+ K ++EA S+    V  G +P  VTYN    GL +  +V+ 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------------- 443
           A +L  +M        T TYT  +DGL K G + EA+ +   +                 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 444 ------------RIL------KCELDIQAYNCLIDGLCKSGRLKFAWELF----CSLPHG 481
                       RI        C  D   Y  LI GLCKSG+ + A+ L+        H 
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAPDVITFDMLIHGFIRINEPSK 540
             VP+VVTY  +I GLC  G++ +AR +F D   E    PD +T+  +I G  ++    +
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
             E  H+M+ +   PDA   + ++D  +K ++  K+
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 276


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 260/496 (52%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L K+   D        +   G+F ++ TYN LIN +C+ G +   F    
Sbjct: 185 VYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMN 244

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P   T+N++I GL  + R + A  +F ++ + G  P+  TYNTL+   CR  
Sbjct: 245 SMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNN 304

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           + + A ++F +M +     GV   P+ +++S++I    + G +D+A   F  MK   + P
Sbjct: 305 NFLEAKDIFSDMLHR----GV--SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVP 358

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI+G C     +EA  +  +M++QG    VV +N I++ LCK + + +A+ L 
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D MV+RGV P+ CT+ TL+ G C  G + +A  LFG M     K D V+YNILI+G+CK 
Sbjct: 419 DEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKT 478

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+E+A  L+ EM+S+ I P  ++Y  L  G   +  V  A +L+DEM R G+     T 
Sbjct: 479 TEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTC 538

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I G C++G + +A E    +       D   YN LI+G  K   +  A+ L   +  
Sbjct: 539 NTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMET 598

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+VVTYN+++ G C  G+M +A  +   M E    PD  T+  LI+G++  +   +
Sbjct: 599 KGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKE 658

Query: 541 VNELLHKMKEKKVMPD 556
                 +M ++  +PD
Sbjct: 659 AFRFHDEMLQRGFVPD 674



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 154/502 (30%), Positives = 257/502 (51%), Gaps = 12/502 (2%)

Query: 70  FNILLASLAK----NKHYDTR--LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           F++L+ S  +    N+  DT   L   G   ++   N L+    K+G V L +  +  I 
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           RS    N  T N ++  L  + +I +       ++  G   +++TYNTLIN  CR G   
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  +   M+ G G      KP   TY+ +I+GLCK+G   +AK +F +M    ++PD  
Sbjct: 238 EAFEVMNSMS-GKG-----LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTT 291

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYN+L+   C  N++ EAK +F +M+ +GV P +++F+ ++    +N  +D+A      M
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G+ P+   Y  L++G+C  G ++ A E+   M   GC  D V+YN ++NG CK K +
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            +A +L+ EMV +G+ P   T+ TL  G  +   +  AL LF  M +  +  D  TY   
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG CK   + +A EL+  +   K   +  +Y  L++G C  G +  A+ L+  +    +
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI 531

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P +VT N +I+G C  G + KA +    M      PD IT++ LI+GF++     K   
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFF 591

Query: 544 LLHKMKEKKVMPDASIVSIVVD 565
           L++KM+ K + PD    +++++
Sbjct: 592 LINKMETKGLQPDVVTYNVILN 613



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 257/488 (52%), Gaps = 8/488 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++LI  + +  +++ G   F  + R  F  +    NSL+ GL     +  A  ++ ++ 
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G E NV T N ++N LC+  H +  +  F       G        + VTY+T+I+  C
Sbjct: 178 RSGIELNVYTLNIMVNALCKD-HKIDDVKPFLIDMEQKGIFA-----DIVTYNTLINAYC 231

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           +EG + +A  +   M  + + P + TYN++I+GLC    +  AK +F EM+  G+ P   
Sbjct: 232 REGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTT 291

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++ E C+N    EA  +   M+ RGV P+  ++++L+      G +++A   F  M
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM 351

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           ++ G   D+V Y ILINGYC+N  + EAL +  +M+ +G    VV YNT+  GL +   +
Sbjct: 352 KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A  LFDEM   GV  D  T+TT I G CK G + +A+ LF  +     + DI  YN L
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDG CK+  ++ A EL+  +    + PN ++Y I++ G CN G + +A  L+ +M     
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI 531

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            P ++T + +I G+ R  + SK +E L KM  + V PD+   + +++  VK E   K+  
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAF- 590

Query: 579 SFLVQERQ 586
            FL+ + +
Sbjct: 591 -FLINKME 597



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 170/357 (47%), Gaps = 29/357 (8%)

Query: 12  SFAS-APISAFRSNFSSLLVHFRDLTTR----EGDINVITPN---------EAFCIFDYM 57
           SF+S   +S+   +    L++FRD+ T     +  I  I  N         EA  I D M
Sbjct: 327 SFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKM 386

Query: 58  LRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIG 110
           L        V ++N +L  L K       N  +D  +   G+ P+  T+  LI+  CK G
Sbjct: 387 LE-QGCALDVVAYNTILNGLCKKKLLADANALFD-EMVERGVVPDFCTFTTLIHGHCKEG 444

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
            +      FG + +    P+  T+N LI G    + + +A  L+ ++ +    PN I+Y 
Sbjct: 445 NMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYA 504

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            L+NG C  G    A  L++EM      I    KP  VT +T+I G C+ G + KA    
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEM------IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFL 558

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M  E + PD +TYN+LI+G       ++A  L  +M  +G+QP VVT+NVI++  C+ 
Sbjct: 559 GKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQ 618

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            +M EA  +L  M++RG+ P+  TY TL++G+     +  A      M   G   DD
Sbjct: 619 GRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 155/316 (49%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D + ++ LI     A   NE    F  +  +G   S+   N ++  L K   +D A  + 
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + + + G+  N  T N +++  C   KI+  +     ME  G   D V+YN LIN YC+ 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             + EA  +   M  KG+KPT+ TYN +  GL +  +   A  +F+EM   G++ DT TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T +   C+N   +EA ++F  +       D+ +++ LI    ++G L  A   F  +  
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+ V Y I+I G C +G M +A ++   M E   A DV+ ++ +++G  +    + 
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD 413

Query: 541 VNELLHKMKEKKVMPD 556
            N L  +M E+ V+PD
Sbjct: 414 ANALFDEMVERGVVPD 429



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 150/297 (50%), Gaps = 4/297 (1%)

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELF 335
           + F++++    + RK++E +    ++ ++G  V  NAC  N+L+ G   MG ++ A E++
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINAC--NSLLGGLVKMGWVDLAWEVY 173

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             +   G + +  + NI++N  CK+ ++++      +M  KGI   +VTYNTL       
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
             +  A ++ + M   G+     TY   I+GLCK G  + A  +F  +  +    D   Y
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N L+   C++     A ++F  + H  + P++++++ +I     +G +D+A   F DM+ 
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           +   PD + + +LI+G+ R    S+  E+  KM E+    D    + +++ L K ++
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKL 410



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 2/240 (0%)

Query: 333 ELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           E+  S+ SM   C  D++ +++LI  Y + +++ E    ++ +  KG   ++   N+L  
Sbjct: 99  EIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLG 158

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL ++  V+ A ++++E+ R G+  +  T    ++ LCK+  I +       +       
Sbjct: 159 GLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFA 218

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  YN LI+  C+ G L  A+E+  S+    L P + TYN +I GLC  G+  +A+ +F
Sbjct: 219 DIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVF 278

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +M     +PD  T++ L+    R N   +  ++   M  + V PD    S ++ +  +N
Sbjct: 279 NEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRN 338


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 275/537 (51%), Gaps = 13/537 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN L+ +L +     T       ++++G+ P+  T+  L+  F + G +      
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+L    +P   T N LI G     R+ +A     +  A G EP+ ITYNT +NGLC+
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            GH   AL + + M     +      P+  TY+ +++ LCK G +++AK +  QM +   
Sbjct: 303 NGHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGC 356

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ T+N+LI  LC  N   EA  L  ++  +G+ P V TFN++++ LCK      A R
Sbjct: 357 LPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALR 416

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M   G  P+  TYNTL+D  C +GK+ +A +L   MES GC    V+YN +I+G C
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +EEA  ++ +M  +GI    +T+NTL  GL +  +++ A +L  +M  +G+  +  
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + +   CK G I +A ++ +T+     E+D+  Y  LI+GLCK+GR + A +L   +
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +      YN +IQ L        A +LF +M E    PD  T+ ++  G  R    
Sbjct: 597 RIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGS 656

Query: 539 -SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
             +  + L +M +K  +P+ S   ++ + L+   +    + +  +   + ++G+S+V
Sbjct: 657 IREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDV 713



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/501 (31%), Positives = 245/501 (48%), Gaps = 9/501 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +   YN L+N   +  ++ L    +  +      P+  TFN+L+K L    ++  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ + G  P+  T+ TL+ G    G    AL +   M     E+G  C P  VT 
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML----EMG--CSPTKVTV 258

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G CK G V+ A     Q       PD +TYN+ ++GLC       A ++   M+ 
Sbjct: 259 NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQ 318

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P V T+N++++ LCKN +++EA  +L+ MV+RG  P+  T+NTL+   C   ++  
Sbjct: 319 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEE 378

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   +   G   D  ++NILIN  CK  + + AL L+ EM S G  P  VTYNTL  
Sbjct: 379 ALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L  + ++  AL L  EM+  G    T TY T IDGLCK   I EA E+F  + +     
Sbjct: 439 NLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 498

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   +N LIDGLCK  R+  A +L   +    L PN +TYN ++   C  G + KA D+ 
Sbjct: 499 NAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 558

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M  N    DV+T+  LI+G  +        +LL  M+ K +       + V+  L + 
Sbjct: 559 QTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRR 618

Query: 571 EISLKSLPSFLVQERQGEVGE 591
             +  ++  F       EVGE
Sbjct: 619 NNTRDAMNLF---REMTEVGE 636



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 156/338 (46%), Gaps = 22/338 (6%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYN 100
           P  A  +F+ M     +P  V+ +N L      L  L K       + + G   +  TYN
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVT-YNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYN 469

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +I+  CK  R+      F ++     + NA TFN+LI GL  + RI +A  L +++ + 
Sbjct: 470 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISE 529

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G +PN ITYN+++   C+ G    A ++ + M     E+ V      VTY T+I+GLCK 
Sbjct: 530 GLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDV------VTYGTLINGLCKA 583

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G    A  L   M+ + +      YN +I  L   N+  +A  LF EM + G  P   T+
Sbjct: 584 GRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTY 643

Query: 281 NVIMDELCK-NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN---RAEELFG 336
            ++   LC+    + EA   L  MV +G  P   ++  L +G   +G  +   RA E+  
Sbjct: 644 KIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIII 703

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
               +G    DVS    I GY K ++  +AL+ +  ++
Sbjct: 704 EKADLG--DSDVSA---IRGYLKIRKFYDALATFGRLL 736



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 2/164 (1%)

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF--RTLRILKCELDIQAYNCLIDG 461
           L  EM+R+G         +F++   +    ++AV+L   +   +   + D   YN L++ 
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNV 159

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L +  ++K    ++  +    + P+VVT+N +++ LC   Q+  A  +  +M  +  APD
Sbjct: 160 LVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPD 219

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             TF  L+ GF+          +  +M E    P    V+++++
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 176/537 (32%), Positives = 268/537 (49%), Gaps = 22/537 (4%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLF 93
           G+   + PN    +F  ML    SP  V +F +++ +L      D+       +   G  
Sbjct: 213 GNCPKVVPN----VFYEMLSKGISPT-VYTFGVVMKALCLVNEVDSACALLKDMTRHGCV 267

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN   Y  LI+   K+GRV+        +L     P+  TFN  I GL    RI EAA L
Sbjct: 268 PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 327

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   G  PN  TY  L++GLCR G    A  L  ++ N          PN V ++T+
Sbjct: 328 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVVLFNTL 377

Query: 214 IDGLCKEGFVDKAKALFLQ-MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+G    G +D+AKA+  + M      PD+ TYN+LI GLC       A+ L  EM  +G
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P+V+T+ +++D  CK  +++EA  +LD M  +G+  NA  YN L+   C   K+  A 
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 497

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +FG M S GCK D  ++N LI G CK  + EEAL LY++M+ +G+    +TYNTL    
Sbjct: 498 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 557

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                ++ ALKL ++M   G   D  TY   I  LC+ G I + + LF  +       + 
Sbjct: 558 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 617

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            + N LI+GLC++G ++ A E    + H  L P++VTYN +I GLC  G+  +A +LF  
Sbjct: 618 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 677

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++     PD IT++ LI    +       + LL +  +   +P+     I+V   +K
Sbjct: 678 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 264/520 (50%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S+N++L  L          N  Y+  + + G+ P +YT
Sbjct: 180 PGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYE--MLSKGISPTVYT 237

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + +++   C +  V         + R    PNA  + +LI  L    R+ E   L  ++ 
Sbjct: 238 FGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEML 297

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+V T+N  I+GLC+      A  L + M            PN+ TY  ++ GLC
Sbjct: 298 LMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLC 351

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-MMDQGVQPSV 277
           + G VD+A+ L  ++     NP+VV +N+LI+G       +EAK +  E M+  G  P +
Sbjct: 352 RMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDI 407

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+N ++  LCK   +  A  L++ M  +G  PN  TY  L+D FC  G++  A  +   
Sbjct: 408 FTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDE 467

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G   + V YN LI+  CK+++V++AL+++ +M SKG KP + T+N+L  GL ++++
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E AL L+ +M  +GV A+T TY T I    + G + EA++L   +    C LD   YN 
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LC++G ++    LF  +    L PN ++ NI+I GLC  G +  A +   DM    
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
             PD++T++ LI+G  +     +   L  K++ + + PDA
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 687



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/448 (33%), Positives = 230/448 (51%), Gaps = 19/448 (4%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V++FN  +  L K        K  D R+   G  PN +TY +L++  C++G+V    +
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVD-RMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 361

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEA-AALFTKLKAFGCEPNVITYNTLINGL 176
              ++      PN   FN+LI G  +  R+ EA A +   + + GC P++ TYNTLI GL
Sbjct: 362 LLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 417

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+ G+ + A  L  EM          C+PN +TY+ +ID  CKEG +++A+ +  +M  +
Sbjct: 418 CKKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 471

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            +  + V YN LI  LC      +A  +F +M  +G +P + TFN ++  LCK  K +EA
Sbjct: 472 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEA 531

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   M+  GV  N  TYNTL+  F   G +  A +L   M   GC  DD++YN LI  
Sbjct: 532 LGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKA 591

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C+   +E+ L+L+ +M+SKG+ P  ++ N L  GL     ++HAL+   +M   G+  D
Sbjct: 592 LCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPD 651

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY + I+GLCK G   EA+ LF  L++     D   YN LI   CK G    A  L  
Sbjct: 652 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 711

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                  +PN VT+ I++     +G  +
Sbjct: 712 RGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 216/450 (48%), Gaps = 12/450 (2%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R + SC  P   ++N ++  L A +       +F ++ + G  P V T+  ++  LC   
Sbjct: 191 RGVYSC-EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L ++M          C PN + Y T+I  L K G V++   L  +M      P
Sbjct: 250 EVDSACALLKDMTRHG------CVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIP 303

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DV T+N  IHGLC     +EA +L   M+ +G  P+  T+ V+M  LC+  K+DEA  LL
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG-SMESMGCKHDDVSYNILINGYCK 359
           +    +   PN   +NTL++G+   G+++ A+ +   SM S+GC  D  +YN LI G CK
Sbjct: 364 N----KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 419

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              +  A  L  EM  KG +P V+TY  L     +  ++E A  + DEM   G+A +   
Sbjct: 420 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 479

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   I  LCK+  + +A+ +F  +    C+ DI  +N LI GLCK  + + A  L+  + 
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              ++ N +TYN +I      G M +A  L  DM       D IT++ LI    R     
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 599

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           K   L   M  K + P+    +I+++ L +
Sbjct: 600 KGLALFEDMMSKGLNPNNISCNILINGLCR 629



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 174/379 (45%), Gaps = 16/379 (4%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y  +ID L   G      AL +QMK E I      +  ++     A    +A RL ++M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 269 MDQGV---QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             +GV   +P+  ++NV++D L           +   M+ +G+ P   T+  +M   CL+
Sbjct: 191 --RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 248

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A  L   M   GC  + + Y  LI+   K   V E L L  EM+  G  P V T+
Sbjct: 249 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTF 308

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N    GL ++ ++  A KL D M   G   ++ TY   + GLC+ G + EA  L   +  
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP- 367

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFA----WELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                ++  +N LI+G    GRL  A     E   S+  G   P++ TYN +I GLC  G
Sbjct: 368 ---NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG---PDIFTYNTLILGLCKKG 421

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +  AR+L  +M+     P+VIT+ +LI  F +     +   +L +M  K +  +A   +
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 481

Query: 562 IVVDLLVKNEISLKSLPSF 580
            ++  L K+E    +L  F
Sbjct: 482 CLISALCKDEKVQDALNMF 500


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 168/527 (31%), Positives = 263/527 (49%), Gaps = 66/527 (12%)

Query: 1   MGLESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRM 60
           + L  C +R+FS  S      RS   S                 I  N+A  +F  M   
Sbjct: 31  LSLRICNSRAFSGRSDYRERLRSGLHS-----------------IKFNDALTLFCDMAES 73

Query: 61  HPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSL 114
           HP P  V  F+ LL ++AK   Y+        L   G+  +LY++  LI+CFC+  R+SL
Sbjct: 74  HPLPSIVD-FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSL 132

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                G++++                                    G EP+++T+ +L+N
Sbjct: 133 ALSCLGKMMK-----------------------------------LGFEPSIVTFGSLVN 157

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G C       A++L +++      +G+  +PN V Y+TIID LC++G V+ A  +   MK
Sbjct: 158 GFCHVNRFYEAMSLVDQI------VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
              I PDVVTYNSLI  L H+  W  + R+  +MM  G+ P V+TF+ ++D   K  ++ 
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA +  + M+QR V PN  TYN+L++G C+ G ++ A+++   + S G   + V+YN LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           NGYCK K V++ + +   M   G+     TYNTL+ G  +  +   A K+   M   GV 
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  T+   +DGLC +G I +A+     L+  K  + I  YN +I GLCK+ +++ AW L
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAP 520
           FCSL    + P+V+TY  M+ GL       +A +L+  M+ E+   P
Sbjct: 452 FCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 219/430 (50%), Gaps = 11/430 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+   F+ L+  +   ++     +LF  L+  G   ++ ++ TLI+  CR     +AL+ 
Sbjct: 77  PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E      P+ VT+ ++++G C      +A +L  Q+      P+VV YN++
Sbjct: 137 LGKMMKLGFE------PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTI 190

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I  LC     N A  +   M   G++P VVT+N ++  L  +     ++R+L  M++ G+
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  T++ L+D +   G++  A++ +  M       + V+YN LING C +  ++EA  
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +   +VSKG  P  VTYNTL  G  +  +V+  +K+   M RDGV  DT TY T   G C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370

Query: 429 KNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           + G    A ++    R++ C +  D+  +N L+DGLC  G++  A      L     V  
Sbjct: 371 QAGKFSAAEKVLG--RMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           ++TYNI+I+GLC   +++ A  LF  +     +PDVIT+  ++ G  R     + +EL  
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488

Query: 547 KM-KEKKVMP 555
           KM KE  +MP
Sbjct: 489 KMQKEDGLMP 498



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 198/429 (46%), Gaps = 10/429 (2%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI----ALNLFEEMANGNGEIGVV 202
           ++E   L T L    C     +  +      R+G   I    AL LF +MA  +      
Sbjct: 21  LLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPL---- 76

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
             P+ V +S ++  + K    +   +LF  ++   I+ D+ ++ +LI   C     + A 
Sbjct: 77  --PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLAL 134

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
               +MM  G +PS+VTF  +++  C   +  EA  L+D +V  G  PN   YNT++D  
Sbjct: 135 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G++N A ++   M+ MG + D V+YN LI     +     +  +  +M+  GI P V
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +T++ L     +  Q+  A K ++EM +  V  +  TY + I+GLC +G + EA ++   
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           L       +   YN LI+G CK+ R+    ++ C +    +  +  TYN + QG C  G+
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
              A  +   M      PD+ TF++L+ G     +  K    L  +++ K +      +I
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNI 434

Query: 563 VVDLLVKNE 571
           ++  L K +
Sbjct: 435 IIKGLCKAD 443



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 145/301 (48%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K ++A  L   M +    P+   ++ L+     + K      LF  +E +G  HD  S+ 
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+ +C+   +  ALS   +M+  G +P++VT+ +L  G   +++   A+ L D++   
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +   Y T ID LC+ G +  A+++ + ++ +    D+  YN LI  L  SG    +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +   +    + P+V+T++ +I     +GQ+ +A+  + +M + +  P+++T++ LI+G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
                   +  ++L+ +  K   P+A   + +++   K +     +    V  R G  G+
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358

Query: 592 S 592
           +
Sbjct: 359 T 359


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/568 (30%), Positives = 285/568 (50%), Gaps = 30/568 (5%)

Query: 49  EAFCIFDYMLRMHPSP---------PPVS---SFNILLASLAKNKH------YDTRLNAT 90
           EA    + +LR+ P P         P V    S+N +LA+L +         +  R+ A 
Sbjct: 48  EASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAH 107

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
              P   +Y  L+   C   R          +  S   P+  T+ +LI+GL   + + +A
Sbjct: 108 ETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKA 167

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++   G EPNV+ Y+ L+ G C+ G       +FEEM+ G G      +P+ V Y
Sbjct: 168 VELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMS-GRG-----IEPDVVMY 221

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +ID LC+EG V KA  +  +M +  + P+VVTYN LI+ +C      EA  L   M++
Sbjct: 222 TGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLE 281

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV--QRGVRPNACTYNTLMDGFCLMGKI 328
           +GV    VT+N ++  L    +MDEA  LL+ M+  +  V PN  T+N+++ G C  G++
Sbjct: 282 KGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRM 341

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A ++   M   GC  + V++N+LI G  +  +V++A+ L  EM S G++P   TY+ L
Sbjct: 342 RQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSIL 401

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  ++ QV+ A  L  +M+RDG+  +   Y   +  LC+ G + +A   F  +    C
Sbjct: 402 INGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NC 460

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           +LD+ AY+ +I G C+    K A E    +    L+P+ VTY+++I    N G +  A  
Sbjct: 461 KLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAER 520

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +   M  +   PDV  FD LI G+    +  KV EL+ +M  K +  D+ I+S +   LV
Sbjct: 521 VLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLV 580

Query: 569 KN---EISLKSLPSFLVQERQGEVGESN 593
            N   +  L+S+P F  +  +G V  S+
Sbjct: 581 ANNEGKALLQSVPGFDTEVSKGAVISSH 608



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 9/263 (3%)

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A+  L ++++RG    +   N L+     +  +  +  L  S+ S+    D VSYN ++ 
Sbjct: 34  AAPFLAVLLRRGRAEASARLNRLLR----LVPLPESPALLSSLPSV---RDAVSYNTVLA 86

Query: 356 GYCKNKE-VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
             C+    ++ AL L R M  +  +PT V+Y TL   L    +   A+ L  +MQ  GV 
Sbjct: 87  ALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVR 145

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY T I GLC    + +AVEL R +     E ++  Y+CL+ G CK+GR +   ++
Sbjct: 146 PDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKV 205

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    + P+VV Y  +I  LC +G++ KA  +   M E    P+V+T+++LI+   +
Sbjct: 206 FEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCK 265

Query: 535 INEPSKVNELLHKMKEKKVMPDA 557
                +   L + M EK V  DA
Sbjct: 266 EGSVKEAMSLRNNMLEKGVALDA 288


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 244/471 (51%), Gaps = 6/471 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + G+ PNL  YN +IN  CK G V+       ++  S  +P+  T+ S+I G   + 
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            +  A  +F ++   GCEPN +TY+TLINGLC +G    A +L  EM       G++  P
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH----GIL--P 318

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              T +  I  LC  G  + A  LF+ MK++   P+V TY +LI GLC +     A  LF
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 378

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   GV P+ VT+N +++ L +NR++  A  +L+LM + G  PN  TYN ++ G+C++
Sbjct: 379 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G   +A  +  +M   G   + V+YN +I GYC +     AL +   M   G KP   +Y
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G  +I ++E A  LF+EM  DG+  +  TYT  IDG CK+  +  A  L   ++ 
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  ++Q YN LI GL K      A EL   +    + PNVVTY  MI GLC +G    
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A ++F  M E    P+++T+  LI    +  +  +   L  +++   ++PD
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 227/449 (50%), Gaps = 8/449 (1%)

Query: 141 LHAESRIMEAAAL--FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           +H     M AA +  + ++ + G +PN++ YN +IN LC+ G+   A  + +++      
Sbjct: 188 IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-- 245

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                 P+T TY+++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   
Sbjct: 246 ----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           NEA  L  EM+  G+ P+  T    +  LC     ++A RL   M  +G  PN  TY  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           + G C+ G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G 
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P +VTYN +  G   +   + A+ + + M + G +A+  TY T I G C +G    A+ 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +R   C+ D  +Y  LI G CK  +++ A+ LF  +    L PN VTY  +I G C
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            D ++D A  L   M+ +   P+V T+++LIHG  + N  S   EL   M E+ + P+  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + ++D L KN  +  +L  F     QG
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQG 630



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 234/538 (43%), Gaps = 65/538 (12%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R++  G+FPN  TYN LIN   +  R+   F+    + R+  +PN  T+N +IKG     
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
              +A  +   +   G   N++TYNT+I G C +G+T  AL + + M +G       CKP
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------CKP 493

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  +Y+ +I G CK   ++ A  LF +M D+ + P+ VTY +LI G C     + A  L 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   G +P+V T+NV++  L K      A  L  +M++ G+ PN  TY  ++DG C  
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  + A E+F  M   GC  + ++Y+ LI    +  +VEEA +L+ E+   G+ P  +TY
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL------------------ 427
             +        +VEHA      M + G      TY   I GL                  
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 733

Query: 428 --CKNGYIIEAVELFRTLRILKCELD----IQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             C  GY     +    +     ELD    +Q  N L+  L  +GR   A EL  S+   
Sbjct: 734 PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 482 VLVPNVVTYNIMI---------------------QG--------------LCNDGQMDKA 506
            L P+   YN ++                     QG              LC   +  +A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           R  F +M      PD +   +LI G +R        E LH M+ ++ MP   I +I+ 
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 212/473 (44%), Gaps = 38/473 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+YTY  LI+  C  G + +    F R+ R    PN  T+N+LI  L    RI  A
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +   +   GC PN++TYN +I G C  G    A+ +   M             N VTY
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS------ANLVTY 463

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TII G C  G    A  +   M+D    PD  +Y  LI G C  +    A  LF EM+D
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VT+  ++D  CK+ K+D A+ LL+ M + G RPN  TYN L+ G       + 
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AEEL   M   G   + V+Y  +I+G CKN     AL ++ +M+ +G  P ++TY++L  
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +VE A  LF E++R G+  D  TY   I+    +G +  A      +    C+ 
Sbjct: 644 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN------------------------ 486
            +  Y  LI GL        A +   +LP   +VPN                        
Sbjct: 704 TLWTYGVLIKGL--KNEYLLADQRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 487 ----VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
               V   N ++  L   G+  +A +L   M      PD   ++ L+   +R+
Sbjct: 760 PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 35/294 (11%)

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M      LD++ Q G+R     Y+ L+     +G      + +  M S G + + + YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +IN  CK+  V +A ++ +++    + P   TY ++ LG    H ++ AL++F++M ++G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------------------------- 443
              +T TY+T I+GLC +G + EA +L R +                             
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 444 RIL------KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           R+        CE ++  Y  LI GLC SG LK A  LF  +    + PN VTYN +I  L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
             + ++  A  +   M  N  +P+++T++ +I G+  + +P K   +++ M ++
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 147/354 (41%), Gaps = 36/354 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N+L+  L K  ++         +   G+FPN+ TY  +I+  CK G  SL    
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN  T++SLI+ L  E ++ EA  LF +L+  G  P+ ITY  +I     
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL--------------------C 218
           +G    A N    M      I   C+P   TY  +I GL                    C
Sbjct: 683 SGKVEHAFNFLGRM------IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNC 736

Query: 219 KEGF--VDKAKALFLQMKDENINP--DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             G+   D+     +  K   ++P   V   N+L+  L  A  W EA  L   M+ QG+ 
Sbjct: 737 SFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P    +N ++  L + R +D A  +   M  +G   +   Y  L+   C + +   A   
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           F +M       DDV   +LI+G  ++   +  +     M ++   P+   Y  L
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 6/161 (3%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N L++     GR        G ++     P+   +NSL+  L     +  A  +F  +  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GCE ++  Y  LI  LC+      A   FE M      +     P+ V  + +IDGL +
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENM------LMRTWNPDDVVQAVLIDGLLR 881

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           +G+ D        M+     P    Y  L         W  
Sbjct: 882 DGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKH 922


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 244/471 (51%), Gaps = 6/471 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + G+ PNL  YN +IN  CK G V+       ++  S  +P+  T+ S+I G   + 
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            +  A  +F ++   GCEPN +TY+TLINGLC +G    A +L  EM       G++  P
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH----GIL--P 318

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              T +  I  LC  G  + A  LF+ MK++   P+V TY +LI GLC +     A  LF
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLF 378

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   GV P+ VT+N +++ L +NR++  A  +L+LM + G  PN  TYN ++ G+C++
Sbjct: 379 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G   +A  +  +M   G   + V+YN +I GYC +     AL +   M   G KP   +Y
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G  +I ++E A  LF+EM  DG+  +  TYT  IDG CK+  +  A  L   ++ 
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  ++Q YN LI GL K      A EL   +    + PNVVTY  MI GLC +G    
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A ++F  M E    P+++T+  LI    +  +  +   L  +++   ++PD
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 227/449 (50%), Gaps = 8/449 (1%)

Query: 141 LHAESRIMEAAAL--FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           +H     M AA +  + ++ + G +PN++ YN +IN LC+ G+   A  + +++      
Sbjct: 188 IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-- 245

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                 P+T TY+++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   
Sbjct: 246 ----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           NEA  L  EM+  G+ P+  T    +  LC     ++A RL   M  +G  PN  TY  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           + G C+ G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G 
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P +VTYN +  G   +   + A+ + + M + G +A+  TY T I G C +G    A+ 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +R   C+ D  +Y  LI G CK  +++ A+ LF  +    L PN VTY  +I G C
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            D ++D A  L   M+ +   P+V T+++LIHG  + N  S   EL   M E+ + P+  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + ++D L KN  +  +L  F     QG
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQG 630



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 234/538 (43%), Gaps = 65/538 (12%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R++  G+FPN  TYN LIN   +  R+   F+    + R+  +PN  T+N +IKG     
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
              +A  +   +   G   N++TYNT+I G C +G+T  AL + + M +G       CKP
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------CKP 493

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  +Y+ +I G CK   ++ A  LF +M D+ + P+ VTY +LI G C     + A  L 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   G +P+V T+NV++  L K      A  L  +M++ G+ PN  TY  ++DG C  
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  + A E+F  M   GC  + ++Y+ LI    +  +VEEA +L+ E+   G+ P  +TY
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL------------------ 427
             +        +VEHA      M + G      TY   I GL                  
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 733

Query: 428 --CKNGYIIEAVELFRTLRILKCELD----IQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             C  GY     +    +     ELD    +Q  N L+  L  +GR   A EL  S+   
Sbjct: 734 PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 482 VLVPNVVTYNIMI---------------------QG--------------LCNDGQMDKA 506
            L P+   YN ++                     QG              LC   +  +A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           R  F +M      PD +   +LI G +R        E LH M+ ++ MP   I +I+ 
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 212/473 (44%), Gaps = 38/473 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+YTY  LI+  C  G + +    F R+ R    PN  T+N+LI  L    RI  A
Sbjct: 350 GCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +   +   GC PN++TYN +I G C  G    A+ +   M             N VTY
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH------SANLVTY 463

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TII G C  G    A  +   M+D    PD  +Y  LI G C  +    A  LF EM+D
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VT+  ++D  CK+ K+D A+ LL+ M + G RPN  TYN L+ G       + 
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AEEL   M   G   + V+Y  +I+G CKN     AL ++ +M+ +G  P ++TY++L  
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +VE A  LF E++R G+  D  TY   I+    +G +  A      +    C+ 
Sbjct: 644 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN------------------------ 486
            +  Y  LI GL        A +   +LP   +VPN                        
Sbjct: 704 TLWTYGVLIKGL--KNEYLLADQRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 487 ----VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
               V   N ++  L   G+  +A +L   M      PD   ++ L+   +R+
Sbjct: 760 PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 35/294 (11%)

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M      LD++ Q G+R     Y+ L+     +G      + +  M S G + + + YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +IN  CK+  V +A ++ +++    + P   TY ++ LG    H ++ AL++F++M ++G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------------------------- 443
              +T TY+T I+GLC +G + EA +L R +                             
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 444 RIL------KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           R+        CE ++  Y  LI GLC SG LK A  LF  +    + PN VTYN +I  L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
             + ++  A  +   M  N  +P+++T++ +I G+  + +P K   +++ M ++
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 147/354 (41%), Gaps = 36/354 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N+L+  L K  ++         +   G+FPN+ TY  +I+  CK G  SL    
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN  T++SLI+ L  E ++ EA  LF +L+  G  P+ ITY  +I     
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL--------------------C 218
           +G    A N    M      I   C+P   TY  +I GL                    C
Sbjct: 683 SGKVEHAFNFLGRM------IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNC 736

Query: 219 KEGF--VDKAKALFLQMKDENINP--DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             G+   D+     +  K   ++P   V   N+L+  L  A  W EA  L   M+ QG+ 
Sbjct: 737 SFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P    +N ++  L + R +D A  +   M  +G   +   Y  L+   C + +   A   
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           F +M       DDV   +LI+G  ++   +  +     M ++   P+   Y  L
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 176/537 (32%), Positives = 268/537 (49%), Gaps = 22/537 (4%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLF 93
           G+   + PN    +F  ML    SP  V +F +++ +L      D+       +   G  
Sbjct: 195 GNCPKVVPN----VFYEMLSKGISPT-VYTFGVVMKALCLVNEVDSACALLKDMTRHGCV 249

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN   Y  LI+   K+GRV+        +L     P+  TFN  I GL    RI EAA L
Sbjct: 250 PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 309

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   G  PN  TY  L++GLCR G    A  L  ++ N          PN V ++T+
Sbjct: 310 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVVLFNTL 359

Query: 214 IDGLCKEGFVDKAKALFLQ-MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+G    G +D+AKA+  + M      PD+ TYN+LI GLC       A+ L  EM  +G
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P+V+T+ +++D  CK  +++EA  +LD M  +G+  NA  YN L+   C   K+  A 
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 479

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +FG M S GCK D  ++N LI G CK  + EEAL LY++M+ +G+    +TYNTL    
Sbjct: 480 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 539

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                ++ ALKL ++M   G   D  TY   I  LC+ G I + + LF  +       + 
Sbjct: 540 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 599

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            + N LI+GLC++G ++ A E    + H  L P++VTYN +I GLC  G+  +A +LF  
Sbjct: 600 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 659

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++     PD IT++ LI    +       + LL +  +   +P+     I+V   +K
Sbjct: 660 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 264/520 (50%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S+N++L  L          N  Y+  + + G+ P +YT
Sbjct: 162 PGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYE--MLSKGISPTVYT 219

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + +++   C +  V         + R    PNA  + +LI  L    R+ E   L  ++ 
Sbjct: 220 FGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEML 279

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+V T+N  I+GLC+      A  L + M            PN+ TY  ++ GLC
Sbjct: 280 LMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLC 333

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-MMDQGVQPSV 277
           + G VD+A+ L  ++     NP+VV +N+LI+G       +EAK +  E M+  G  P +
Sbjct: 334 RMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDI 389

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+N ++  LCK   +  A  L++ M  +G  PN  TY  L+D FC  G++  A  +   
Sbjct: 390 FTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDE 449

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G   + V YN LI+  CK+++V++AL+++ +M SKG KP + T+N+L  GL ++++
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E AL L+ +M  +GV A+T TY T I    + G + EA++L   +    C LD   YN 
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LC++G ++    LF  +    L PN ++ NI+I GLC  G +  A +   DM    
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
             PD++T++ LI+G  +     +   L  K++ + + PDA
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDA 669



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/448 (33%), Positives = 230/448 (51%), Gaps = 19/448 (4%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V++FN  +  L K        K  D R+   G  PN +TY +L++  C++G+V    +
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVD-RMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 343

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEA-AALFTKLKAFGCEPNVITYNTLINGL 176
              ++      PN   FN+LI G  +  R+ EA A +   + + GC P++ TYNTLI GL
Sbjct: 344 LLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 399

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+ G+ + A  L  EM          C+PN +TY+ +ID  CKEG +++A+ +  +M  +
Sbjct: 400 CKKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 453

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            +  + V YN LI  LC      +A  +F +M  +G +P + TFN ++  LCK  K +EA
Sbjct: 454 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEA 513

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   M+  GV  N  TYNTL+  F   G +  A +L   M   GC  DD++YN LI  
Sbjct: 514 LGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKA 573

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C+   +E+ L+L+ +M+SKG+ P  ++ N L  GL     ++HAL+   +M   G+  D
Sbjct: 574 LCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPD 633

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY + I+GLCK G   EA+ LF  L++     D   YN LI   CK G    A  L  
Sbjct: 634 IVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLS 693

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                  +PN VT+ I++     +G  +
Sbjct: 694 RGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 216/450 (48%), Gaps = 12/450 (2%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R + SC  P   ++N ++  L A +       +F ++ + G  P V T+  ++  LC   
Sbjct: 173 RGVYSC-EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 231

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L ++M          C PN + Y T+I  L K G V++   L  +M      P
Sbjct: 232 EVDSACALLKDMTRHG------CVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIP 285

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DV T+N  IHGLC     +EA +L   M+ +G  P+  T+ V+M  LC+  K+DEA  LL
Sbjct: 286 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG-SMESMGCKHDDVSYNILINGYCK 359
           +    +   PN   +NTL++G+   G+++ A+ +   SM S+GC  D  +YN LI G CK
Sbjct: 346 N----KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              +  A  L  EM  KG +P V+TY  L     +  ++E A  + DEM   G+A +   
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   I  LCK+  + +A+ +F  +    C+ DI  +N LI GLCK  + + A  L+  + 
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              ++ N +TYN +I      G M +A  L  DM       D IT++ LI    R     
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           K   L   M  K + P+    +I+++ L +
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCR 611



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 174/379 (45%), Gaps = 16/379 (4%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y  +ID L   G      AL +QMK E I      +  ++     A    +A RL ++M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 269 MDQGV---QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             +GV   +P+  ++NV++D L           +   M+ +G+ P   T+  +M   CL+
Sbjct: 173 --RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 230

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A  L   M   GC  + + Y  LI+   K   V E L L  EM+  G  P V T+
Sbjct: 231 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTF 290

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N    GL ++ ++  A KL D M   G   ++ TY   + GLC+ G + EA  L   +  
Sbjct: 291 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP- 349

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFA----WELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                ++  +N LI+G    GRL  A     E   S+  G   P++ TYN +I GLC  G
Sbjct: 350 ---NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG---PDIFTYNTLILGLCKKG 403

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +  AR+L  +M+     P+VIT+ +LI  F +     +   +L +M  K +  +A   +
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYN 463

Query: 562 IVVDLLVKNEISLKSLPSF 580
            ++  L K+E    +L  F
Sbjct: 464 CLISALCKDEKVQDALNMF 482


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 244/471 (51%), Gaps = 6/471 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + G+ PNL  YN +IN  CK G V+       ++  S  +P+  T+ S+I G   + 
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            +  A  +F ++   GCEPN +TY+TLINGLC +G    A +L  EM       G++  P
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH----GIL--P 318

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              T +  I  LC  G  + A  LF+ MK++   P+V TY +LI GLC +     A  LF
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 378

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   GV P+ VT+N +++ L +NR++  A  +L+LM + G  PN  TYN ++ G+C++
Sbjct: 379 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G   +A  +  +M   G   + V+YN +I GYC +     AL +   M   G KP   +Y
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G  +I ++E A  LF+EM  DG+  +  TYT  IDG CK+  +  A  L   ++ 
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  ++Q YN LI GL K      A EL   +    + PNVVTY  MI GLC +G    
Sbjct: 559 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 618

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A ++F  M E    P+++T+  LI    +  +  +   L  +++   ++PD
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 227/449 (50%), Gaps = 8/449 (1%)

Query: 141 LHAESRIMEAAAL--FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           +H     M AA +  + ++ + G +PN++ YN +IN LC+ G+   A  + +++      
Sbjct: 188 IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-- 245

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                 P+T TY+++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   
Sbjct: 246 ----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           NEA  L  EM+  G+ P+  T    +  LC     ++A RL   M  +G  PN  TY  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           + G C+ G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G 
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P +VTYN +  G   +   + A+ + + M + G +A+  TY T I G C +G    A+ 
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +R   C+ D  +Y  LI G CK  +++ A+ LF  +    L PN VTY  +I G C
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            D ++D A  L   M+ +   P+V T+++LIHG  + N  S   EL   M E+ + P+  
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + ++D L KN  +  +L  F     QG
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQG 630



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 234/538 (43%), Gaps = 65/538 (12%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R++  G+FPN  TYN LIN   +  R+   F+    + R+  +PN  T+N +IKG     
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
              +A  +   +   G   N++TYNT+I G C +G+T  AL + + M +G       CKP
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------CKP 493

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  +Y+ +I G CK   ++ A  LF +M D+ + P+ VTY +LI G C     + A  L 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   G +P+V T+NV++  L K      A  L  +M++ G+ PN  TY  ++DG C  
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  + A E+F  M   GC  + ++Y+ LI    +  +VEEA +L+ E+   G+ P  +TY
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL------------------ 427
             +        +VEHA      M + G      TY   I GL                  
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 733

Query: 428 --CKNGYIIEAVELFRTLRILKCELD----IQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             C  GY     +    +     ELD    +Q  N L+  L  +GR   A EL  S+   
Sbjct: 734 PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 482 VLVPNVVTYNIMI---------------------QG--------------LCNDGQMDKA 506
            L P+   YN ++                     QG              LC   +  +A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           R  F +M      PD +   +LI G +R        E LH M+ ++ MP   I +I+ 
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 212/473 (44%), Gaps = 38/473 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+YTY  LI+  C  G + +    F R+ R    PN  T+N+LI  L    RI  A
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +   +   GC PN++TYN +I G C  G    A+ +   M             N VTY
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH------SANLVTY 463

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TII G C  G    A  +   M+D    PD  +Y  LI G C  +    A  LF EM+D
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VT+  ++D  CK+ K+D A+ LL+ M + G RPN  TYN L+ G       + 
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AEEL   M   G   + V+Y  +I+G CKN     AL ++ +M+ +G  P ++TY++L  
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +VE A  LF E++R G+  D  TY   I+    +G +  A      +    C+ 
Sbjct: 644 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN------------------------ 486
            +  Y  LI GL        A +   +LP   +VPN                        
Sbjct: 704 TLWTYGVLIKGL--KNEYLLADQRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 487 ----VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
               V   N ++  L   G+  +A +L   M      PD   ++ L+   +R+
Sbjct: 760 PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 812



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 35/294 (11%)

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M      LD++ Q G+R     Y+ L+     +G      + +  M S G + + + YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +IN  CK+  V +A ++ +++    + P   TY ++ LG    H ++ AL++F++M ++G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------------------------- 443
              +T TY+T I+GLC +G + EA +L R +                             
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 444 RIL------KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           R+        CE ++  Y  LI GLC SG LK A  LF  +    + PN VTYN +I  L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
             + ++  A  +   M  N  +P+++T++ +I G+  + +P K   +++ M ++
Sbjct: 401 VENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 147/354 (41%), Gaps = 36/354 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N+L+  L K  ++         +   G+FPN+ TY  +I+  CK G  SL    
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN  T++SLI+ L  E ++ EA  LF +L+  G  P+ ITY  +I     
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL--------------------C 218
           +G    A N    M      I   C+P   TY  +I GL                    C
Sbjct: 683 SGKVEHAFNFLGRM------IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNC 736

Query: 219 KEGF--VDKAKALFLQMKDENINP--DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             G+   D+     +  K   ++P   V   N+L+  L  A  W EA  L   M+ QG+ 
Sbjct: 737 SFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLC 796

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P    +N ++  L + R +D A  +   M  +G   +   Y  L+   C + +   A   
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           F +M       DDV   +LI+G  ++   +  +     M ++   P+   Y  L
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/493 (32%), Positives = 262/493 (53%), Gaps = 23/493 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ PN+YTYNIL+   C  GR+       G +  +   PNA T+N+L+        +  A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 151 AALFTKLKAFG-CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
             + + ++  G  +PN++T+N+++NGLC+ G    A  +F+EM            P+ V+
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG------LAPDVVS 118

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ G CK G + ++ A+F +M    + PDVVT+ SLIH  C A +  +A  L  +M 
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           ++G++ + VTF  ++D  CK   +D+A   ++ M + G++P+   YN L++G+C +G+++
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A EL   ME+   K D V+Y+ +I+GYCK   ++ A  L ++M+ KG+ P  +TY++L 
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL E  ++  A +LF+ M + GV  D  TYTT IDG CK G + +A+ L   +      
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN---------------IMI 494
            D+  Y+ LI+GL KS R K A  L   L H   VP+ + Y+                ++
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 418

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +G C  G M +A  ++  M +     D   + +LIHG  R     K      +M      
Sbjct: 419 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 478

Query: 555 PDA-SIVSIVVDL 566
           P++ S +S+V  L
Sbjct: 479 PNSTSTISLVRGL 491



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/461 (33%), Positives = 242/461 (52%), Gaps = 26/461 (5%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++R    PN  T+N L++ L A  R+ EA  +   ++  GC PN +TYNTL+   CR G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 182 TMIA---LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              A   ++L  E  N         KPN VT++++++GLCK G ++ A+ +F +M  E +
Sbjct: 61  LDGAERVVSLMREEGNA--------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGL 112

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVV+YN+L+ G C     +E+  +F EM  +G+ P VVTF  ++   CK   +++A  
Sbjct: 113 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 172

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+  M +RG+R N  T+  L+DGFC  G ++ A      M   G +   V YN LINGYC
Sbjct: 173 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 232

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++ A  L REM +K +KP VVTY+T+  G  ++  ++ A +L  +M + GV  D  
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY++ I GLC+   + +A ELF  +  L  + D   Y  LIDG CK G ++ A  L   +
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD------------ 526
               ++P+VVTY+++I GL    +  +A  L   +      PD I +D            
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 412

Query: 527 ---MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
               L+ GF       + +++   M ++    D S+ SI++
Sbjct: 413 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILI 453



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 255/509 (50%), Gaps = 54/509 (10%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIG 110
           M+R H   P V ++NIL+ +L      +        +   G  PN  TYN L+  FC+ G
Sbjct: 1   MVR-HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 59

Query: 111 RVSLGFIAFGRILR--SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            +  G      ++R      PN  TFNS++ GL    R+  A  +F ++   G  P+V++
Sbjct: 60  ELD-GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118

Query: 169 YNTLINGLCRTGHTMIALNLFEEMAN--------------------GNGEIGVV------ 202
           YNTL++G C+ G    +L +F EM                      GN E  V       
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 203 ---CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
               + N VT++ +IDG CK+GF+D A     +M+   I P VV YN+LI+G C     +
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A+ L  EM  + V+P VVT++ I+   CK   +D A +L   M+++GV P+A TY++L+
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
            G C   ++N A ELF +M  +G + D+ +Y  LI+G+CK   VE+ALSL+ EM+ KG+ 
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLF----------DEMQRDGV-----AADTRTYTTFI 424
           P VVTY+ L  GL +  + + A +L           D ++ D +      A+ ++    +
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 418

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            G C  G + EA ++++++     +LD   Y+ LI G C+ G ++ A      +      
Sbjct: 419 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 478

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           PN  +   +++GL  +G + +A +   D+
Sbjct: 479 PNSTSTISLVRGLFEEGMVVEADNAIQDL 507



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 204/367 (55%), Gaps = 1/367 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN  TY+ ++  LC  G +++A  +   M+     P+ VTYN+L+   C A + + A+R+
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 265 FIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
              M ++G  +P++VTFN +++ LCK  +M+ A ++ D MV+ G+ P+  +YNTL+ G+C
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +G ++ +  +F  M   G   D V++  LI+  CK   +E+A++L  +M  +G++   V
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+  L  G  +   ++ AL   +EM++ G+      Y   I+G CK G +  A EL R +
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
              + + D+  Y+ +I G CK G L  A++L   +    ++P+ +TY+ +I+GLC + ++
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           + A +LF +M +    PD  T+  LI G  +     K   L  +M  K V+PD    S++
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367

Query: 564 VDLLVKN 570
           ++ L K+
Sbjct: 368 INGLSKS 374



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 214/456 (46%), Gaps = 30/456 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           +FD M+R     P V S+N LL+       L ++    + +   GL P++ T+  LI+  
Sbjct: 103 VFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 161

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK G +        ++       N  TF +LI G   +  + +A     +++  G +P+V
Sbjct: 162 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 221

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + YN LING C+ G   +A  L  EM           KP+ VTYSTII G CK G +D A
Sbjct: 222 VCYNALINGYCKLGRMDLARELIREMEAKR------VKPDVVTYSTIISGYCKVGNLDSA 275

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L  +M  + + PD +TY+SLI GLC     N+A  LF  M+  GVQP   T+  ++D 
Sbjct: 276 FQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 335

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK   +++A  L D M+++GV P+  TY+ L++G     +   A  L   +       D
Sbjct: 336 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 395

Query: 347 DVSYNIL---------------INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           ++ Y+ L               + G+C    ++EA  +Y+ M+ +  K     Y+ L  G
Sbjct: 396 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 455

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL- 450
                 V  AL    +M R G + ++ +  + + GL + G ++EA    + L +  C L 
Sbjct: 456 HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL-LTCCPLA 514

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           D +A   LID   K G +    ++ C +    L+P+
Sbjct: 515 DAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 173/385 (44%), Gaps = 36/385 (9%)

Query: 27  SLLVHFRDLTTREGDINVITPNEAFCIFDYM---------LRMHPSPPPVSSFNILLASL 77
           +L+   R+   R  ++      + FC   ++         +R     P V  +N L+   
Sbjct: 172 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 231

Query: 78  AKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
            K    D        + A  + P++ TY+ +I+ +CK+G +   F    ++L+    P+A
Sbjct: 232 CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 291

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            T++SLI+GL  E R+ +A  LF  +   G +P+  TY TLI+G C+ G+   AL+L +E
Sbjct: 292 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 351

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN----- 246
           M       GV+  P+ VTYS +I+GL K     +A  L  ++  E+  PD + Y+     
Sbjct: 352 MIRK----GVL--PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC 405

Query: 247 ----------SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
                     +L+ G C      EA +++  M+D+  +     +++++   C+   + +A
Sbjct: 406 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 465

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
                 M++ G  PN+ +  +L+ G    G +  A+     + +     D  +   LI+ 
Sbjct: 466 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDL 525

Query: 357 YCKNKEVEEALSLYREMVSKGIKPT 381
             K   V+  + +   M   G+ P+
Sbjct: 526 NRKEGNVDALIDVLCGMARDGLLPS 550


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 261/511 (51%), Gaps = 13/511 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N L+ +L +     T       +++ G+ P+  T+  L+  F + G +      
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++ +  +P   T N LI G     R+ +A     +  A G EP+ +TYNT ++GLC+
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            GH   AL + + M     +      P+  TY+T+I+ L K G +D+AK +  QM D   
Sbjct: 315 NGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  T+N+LI  L   N   EA  L  E+  +G+ P V TFN++++ LCK        R
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M   G  P+  TYN L+D  C MGK+  A +L   MES GC    V+YN +I+  C
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +EEA  ++ +M ++GI  + VT+NTL  GL +  +++ A +L ++M ++G+  +  
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + +   CK G I +A ++  T+     E+D+  Y  LI+GLCK+GR + A +L   +
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P    YN +IQ L     +  A +LF +M E    PD +T+ ++     R   P
Sbjct: 609 RIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGP 668

Query: 539 SK-VNELLHKMKEKKVMPDASIVSIVVDLLV 568
            K   + L +M  K  MP+ S   ++ + L+
Sbjct: 669 IKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 699



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 231/479 (48%), Gaps = 6/479 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +   +N L+N   +  ++ L    +  +      P+  T N+LIK L    ++  A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ + G  P+  T+ TL+ G    G    AL +  +M          C P  VT 
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG------CSPTGVTV 270

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G CK G V+ A     Q   +   PD VTYN+ +HGLC     + A ++   M+ 
Sbjct: 271 NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQ 330

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P V T+N +++ L KN ++DEA  +++ MV RG  P+  T+NTL+       ++  
Sbjct: 331 EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEE 390

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   +   G   D  ++NILIN  CK  +    + L+ EM S G  P  VTYN L  
Sbjct: 391 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILID 450

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L  + ++ +AL L +EM+ +G    T TY T ID LCK   I EA E+F  +       
Sbjct: 451 HLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR 510

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               +N LIDGLCK+ R+  A EL   +    L PN +TYN ++   C  G + KA D+ 
Sbjct: 511 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADIL 570

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             M  N    DV+T+  LI+G  +        +LL  M+ K + P     + V+  L +
Sbjct: 571 ETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 629



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 207/451 (45%), Gaps = 81/451 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N  +  L +N H    L    L       P+++TYN +INC  K G +      
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359

Query: 119 FGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             +++ R C  P+  TFN+LI  L +++R+ EA  L  +L   G  P+V T+N LIN LC
Sbjct: 360 VNQMVDRGCL-PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 418

Query: 178 RTGHTMIALNLFEEMANGN------------------GEIGVV-----------CKPNTV 208
           + G   + + LFEEM +                    G++G             C  +TV
Sbjct: 419 KVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTV 478

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+TIID LCK+  +++A+ +F QM  + I+   VT+N+LI GLC A   ++A  L  +M
Sbjct: 479 TYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 538

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + +G+QP+ +T+N I+   CK   + +A+ +L+ M   G   +  TY TL++G C  G+ 
Sbjct: 539 VKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 598

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM--------------- 373
             A +L   M   G +    +YN +I    +   + +AL+L+REM               
Sbjct: 599 QVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIV 658

Query: 374 ---------------------VSKGIKPTVVTYNTLFLGLFEIHQVEH---ALKLFDEMQ 409
                                V+KG  P   ++  L  GL  +   ++   A++L  E  
Sbjct: 659 FRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKA 718

Query: 410 --RDGVAADTRTY---TTFIDGLCKNGYIIE 435
             R+  A+  R Y     + D L   G ++E
Sbjct: 719 KFRESDASAIRGYLKIRKYYDALATFGRLLE 749



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 5/332 (1%)

Query: 246 NSLIHGLCHANDWNEAKRLF-IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           + L+  L   +D   A R+    +  +   PS   +  I+ +L      D    L+  M 
Sbjct: 57  DRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMR 116

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM---ESMGCKHDDVSYNILINGYCKNK 361
           + G +  A    + ++ +  + + + A +L  +    ++ G + D V +N L+N   +  
Sbjct: 117 REGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGS 176

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +++   S+Y EM  +GI+P VVT NTL   L   HQV  A+ + +EM   GVA D  T+T
Sbjct: 177 KLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFT 236

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T + G  + G I  A+ +   +    C       N LI+G CK GR++ A          
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+ VTYN  + GLC +G +  A  +   M +    PDV T++ +I+   +  E  + 
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356

Query: 542 NELLHKMKEKKVMPDASIV-SIVVDLLVKNEI 572
             ++++M ++  +PD +   +++V L  +N +
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 155/483 (32%), Positives = 263/483 (54%), Gaps = 8/483 (1%)

Query: 70  FNIL--LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
           FN+L  L  L + +    ++N   + P + + N L++   K  +  L    F  ++ +  
Sbjct: 188 FNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGL 247

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +P+  T+N +I  L  E  +  A +LF ++KA G  P+++TYN+LI+G  + G    A++
Sbjct: 248 SPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVS 307

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +FEEM +        C+P+ +TY+++I+  CK   + +A      MK   + P+VVTY++
Sbjct: 308 VFEEMKDAG------CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYST 361

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI   C A    EA + F++M+  G+QP+  T+  ++D  CK   ++EA +L   M Q G
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           V  N  TY  L+DG C  G++  AEELFG++   G   +   Y  L +GY K K +E+A+
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            +  EM  K +KP ++ Y T   GL   +++E ++ +  EM   G+ A++  YTT ID  
Sbjct: 482 DILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAY 541

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K G   EAV L + ++ L  ++ +  Y  LIDGLCK G ++ A   F  +    L PN+
Sbjct: 542 FKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNI 601

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           + Y  +I GLC +  +++A++LF +M +   +PD + +  LI G ++   P +   L ++
Sbjct: 602 MIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNR 661

Query: 548 MKE 550
           M E
Sbjct: 662 MVE 664



 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 161/498 (32%), Positives = 244/498 (48%), Gaps = 12/498 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S N LL  L+K+      L+        GL P+++TYN++I C  + G +      
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P+  T+NSLI G      +  A ++F ++K  GCEP+VITYN+LIN  C+
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A     E  +G  + G+  +PN VTYST+ID  CK G + +A   F+ M    +
Sbjct: 334 FERIPQAF----EYLHGMKQRGL--QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGL 387

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  TY SLI   C   D NEA +L  EM   GV  ++VT+  ++D LC++ +M EA  
Sbjct: 388 QPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEE 447

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   +++ G   N   Y +L  G+     + +A ++   M     K D + Y   I G C
Sbjct: 448 LFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLC 507

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  E+E+++++ REM+  G+      Y TL    F++ +   A+ L  EMQ  G+     
Sbjct: 508 RQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVV 567

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   IDGLCK G + +AV  F  +     + +I  Y  LIDGLCK+  L+ A  LF  +
Sbjct: 568 TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM 627

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P+ + Y  +I G    G   +A  L   M E     D+  +  LI GF R  + 
Sbjct: 628 LDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQV 687

Query: 539 SKVNELLHKMKEKKVMPD 556
                LL +M  K ++PD
Sbjct: 688 QLAKSLLDEMLRKGIIPD 705



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 253/527 (48%), Gaps = 59/527 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N+++  LA+    +        + A GL P++ TYN LI+ + K+G ++     
Sbjct: 249 PSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSV 308

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +  +   P+  T+NSLI       RI +A      +K  G +PNV+TY+TLI+  C+
Sbjct: 309 FEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCK 368

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  + A   F +M      I V  +PN  TY+++ID  CK G +++A  L  +M+   +
Sbjct: 369 AGMLLEANKFFVDM------IRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGV 422

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-------------------------- 272
           N ++VTY +L+ GLC      EA+ LF  ++  G                          
Sbjct: 423 NLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMD 482

Query: 273 ---------VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                    ++P ++ +   +  LC+  +++++  ++  M+  G+  N+  Y TL+D + 
Sbjct: 483 ILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYF 542

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +GK   A  L   M+ +G K   V+Y +LI+G CK   V++A+  +  M   G++P ++
Sbjct: 543 KVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIM 602

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y  L  GL +   +E A  LF+EM   G++ D   YT+ IDG  K+G   EA+ L   +
Sbjct: 603 IYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRM 662

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
             +  ELD+ AY  LI G  + G+++ A  L   +    ++P+ V    +++     G +
Sbjct: 663 VEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDI 722

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL--LHKM 548
           ++A  L  DM              LI G I I  PS +  +  LHK+
Sbjct: 723 NEALALHDDMARRG----------LISGTIDITVPSCLTAVTKLHKL 759



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 192/368 (52%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC+P    + T+ + L   G +++A+  F +M    + P V + N L+H L  ++    A
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
              F +M+  G+ PSV T+N+++  L +   ++ A  L + M  +G+RP+  TYN+L+DG
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G +  A  +F  M+  GC+ D ++YN LIN +CK + + +A      M  +G++P 
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTY+TL     +   +  A K F +M R G+  +  TYT+ ID  CK G + EA +L  
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            ++     L+I  Y  L+DGLC+ GR++ A ELF +L       N   Y  +  G     
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            M+KA D+  +M +    PD++ +   I G  R NE      ++ +M +  +  ++ I +
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535

Query: 562 IVVDLLVK 569
            ++D   K
Sbjct: 536 TLIDAYFK 543


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 258/496 (52%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L KN      K + + +   G+FP++ TYN LIN +C+ G +   F    
Sbjct: 254 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 313

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P   T+N++I GL    + + A  +  ++   G  P+  TYN L+   CR  
Sbjct: 314 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 373

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           + M A  +F+EM +     GVV  P+ V++S +I  L K G +D+A   F  MK+  + P
Sbjct: 374 NMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 427

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI G C     +EA ++  EM++QG    VVT+N I++ LCK + + EA  L 
Sbjct: 428 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 487

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +RGV P+  T+ TL++G+   G +N+A  LF  M     K D V+YN LI+G+CK 
Sbjct: 488 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 547

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+E+   L+ +M+S+ I P  ++Y  L  G   +  V  A +L+DEM   G  A   T 
Sbjct: 548 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 607

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T + G C+ G  ++A E    + +     D   YN LI+G  K   +  A+ L   + +
Sbjct: 608 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 667

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L+P+V+TYN+++ G    G+M +A  + L M E    PD  T+  LI+G +  N   +
Sbjct: 668 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 727

Query: 541 VNELLHKMKEKKVMPD 556
              +  +M ++  +PD
Sbjct: 728 AFRVHDEMLQRGFVPD 743



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 257/480 (53%), Gaps = 12/480 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRS---CFTPNAATFNSLIKGLHAESRIMEAA 151
           N   +++L+  + +  ++  G  AF R+L+S   C + NA   NSL+ GL     +  A 
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINAC--NSLLGGLVKVGWVDLAW 239

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            ++ ++   G + NV T N +IN LC+        +   +M     E GV   P+ VTY+
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME----EKGVF--PDVVTYN 293

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+  C++G +++A  L   M  + + P V TYN++I+GLC    +  AK +  EM+  
Sbjct: 294 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 353

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ P   T+N+++ E C+N  M +A R+ D M  +GV P+  +++ L+      G +++A
Sbjct: 354 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 413

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            + F  M++ G   D+V Y ILI G+C+N  + EAL +  EM+ +G    VVTYNT+  G
Sbjct: 414 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 473

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +   +  A +LF EM   GV  D  T+TT I+G  K+G + +AV LF  +     + D
Sbjct: 474 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 533

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN LIDG CK   ++   EL+  +    + PN ++Y I+I G CN G + +A  L+ 
Sbjct: 534 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 593

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +M E      +IT + ++ G+ R     K +E L  M  K ++PD    + +++  +K E
Sbjct: 594 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 245/479 (51%), Gaps = 6/479 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L + GL  ++   N L+    K+G V L +  +  ++RS    N  T N +I  L    +
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 269

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I    +  + ++  G  P+V+TYNTLIN  CR G    A  L + M+ G G      KP 
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS-GKG-----LKPC 323

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ II+GLCK G   +AK +  +M    ++PD  TYN L+   C  ++  +A+R+F 
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 383

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  QGV P +V+F+ ++  L KN  +D+A +    M   G+ P+   Y  L+ GFC  G
Sbjct: 384 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 443

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A ++   M   GC  D V+YN ++NG CK K + EA  L+ EM  +G+ P   T+ 
Sbjct: 444 VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 503

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G  +   +  A+ LF+ M +  +  D  TY T IDG CK   + +  EL+  +   
Sbjct: 504 TLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 563

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           +   +  +Y  LI+G C  G +  A+ L+  +        ++T N +++G C  G   KA
Sbjct: 564 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 623

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   +M      PD IT++ LI+GFI+     +   L++KM+   ++PD    +++++
Sbjct: 624 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 682



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 200/376 (53%), Gaps = 21/376 (5%)

Query: 53  IFDYMLRMHPSP---PPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNIL 102
           IFD M    PS    P + SF+ L+  L+KN       K++    NA GL P+   Y IL
Sbjct: 381 IFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA-GLAPDNVIYTIL 435

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  FC+ G +S        +L      +  T+N+++ GL  E  + EA  LFT++   G 
Sbjct: 436 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  T+ TLING  + G+   A+ LFE M   N       KP+ VTY+T+IDG CK   
Sbjct: 496 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSE 549

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++K   L+  M    I P+ ++Y  LI+G C+    +EA RL+ EM+++G + +++T N 
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I+   C+     +A   L  M+ +G+ P+  TYNTL++GF     ++RA  L   ME+ G
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++YN+++NG+ +   ++EA  +  +M+ +G+ P   TY +L  G    + ++ A 
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 729

Query: 403 KLFDEMQRDGVAADTR 418
           ++ DEM + G   D +
Sbjct: 730 RVHDEMLQRGFVPDDK 745



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 174/355 (49%), Gaps = 21/355 (5%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-------VQPSVVT---------- 279
           N    + +++++IH L  +    +A+ + + M+ +        V+  V+T          
Sbjct: 127 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLV 186

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           F++++    + RK+ E      ++  +G  V  NAC  N+L+ G   +G ++ A E++  
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC--NSLLGGLVKVGWVDLAWEIYQE 244

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +   G + +  + NI+IN  CKN+++E   S   +M  KG+ P VVTYNTL         
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A +L D M   G+     TY   I+GLCK G  + A  +   +  +    D   YN 
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L+   C++  +  A  +F  +P   +VP++V+++ +I  L  +G +D+A   F DM+   
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            APD + + +LI GF R    S+  ++  +M E+  + D    + +++ L K ++
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 229/413 (55%), Gaps = 9/413 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G  P++ TYN+LI  +CK G +        R+      P+  T+N++++ L    +
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  +  +     C P+VITY  LI   C       A+ L +EM          CKP+
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG------CKPD 277

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A+RL  
Sbjct: 278 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLS 337

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ +G  PSVVTFN++++ LC+ R +  A  +L+ M + G  PN+ +YN L+ GFC   
Sbjct: 338 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEK 397

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K++RA E    M S GC  D V+YN L+   CK+ +V+ A+ +  ++ SKG  P ++TYN
Sbjct: 398 KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYN 457

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL ++ + E+A++L +EM+R G+  D  TY+T + GL + G + EA+++F  +  L
Sbjct: 458 TVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL 517

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
             +     YN ++ GLCK+ +   A +    +      P   TY I+I+G+ +
Sbjct: 518 SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 241/469 (51%), Gaps = 9/469 (1%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           +  NI +    + G +  G     R++     P+     SLI+G     +  +A  +   
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           L+  G  P+VITYN LI G C++G    AL + E M+           P+ VTY+TI+  
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---------VAPDVVTYNTILRS 217

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LC  G + +A  +  +       PDV+TY  LI   C+ +   +A +L  EM  +G +P 
Sbjct: 218 LCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPD 277

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VVT+NV+++ +CK  ++DEA + L+ M   G +PN  T+N ++   C  G+   AE L  
Sbjct: 278 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLS 337

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   GC    V++NILIN  C+ + +  A+ +  +M   G  P  ++YN L  G  +  
Sbjct: 338 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEK 397

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +++ A++  + M   G   D  TY T +  LCK+G +  AVE+   L    C   +  YN
Sbjct: 398 KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYN 457

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +IDGL K G+ ++A EL   +    L P+++TY+ +++GL  +G++D+A  +F DME  
Sbjct: 458 TVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGL 517

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +  P  +T++ ++ G  +  + S+  + L  M EK   P  +  +I+++
Sbjct: 518 SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 254/512 (49%), Gaps = 36/512 (7%)

Query: 35  LTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS---SF-----NILLASLAKNKHYDT- 85
           ++T  GD+NVI              M  SP  V+   SF     NI L  L +N   +  
Sbjct: 79  VSTPNGDLNVIG-------------MESSPIGVNGSRSFEEFASNIHLRKLVRNGELEEG 125

Query: 86  -----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
                R+   G  P++     LI  FC+ G+          +  S   P+  T+N LI G
Sbjct: 126 LKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGG 185

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
                 I +A  +  ++      P+V+TYNT++  LC +G    A+ + +       ++ 
Sbjct: 186 YCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEAMEVLDR------QLQ 236

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C P+ +TY+ +I+  C +  V +A  L  +M+ +   PDVVTYN LI+G+C     +E
Sbjct: 237 RECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 296

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A +    M   G +P+V+T N+I+  +C   +  +A RLL  M+++G  P+  T+N L++
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
             C    + RA ++   M   GC  + +SYN L++G+C+ K+++ A+     MVS+G  P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            +VTYNTL   L +  +V+ A+++ +++   G +    TY T IDGL K G    AVEL 
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +R    + DI  Y+ L+ GL + G++  A ++F  +    + P+ VTYN ++ GLC  
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            Q  +A D    M E    P   T+ +LI G 
Sbjct: 537 QQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 148/404 (36%), Positives = 234/404 (57%), Gaps = 13/404 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +F+ +LR +P+PP +  FN +L SL K+KHY T      ++   G+ PNL   NI
Sbjct: 69  DDAVSLFNCLLRQNPTPPAIE-FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC++G +   F  F +IL+  + PN  TF +LIKGL  + +I +A     KL A G
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            + N I+Y TLI+GLC+ G T  AL+L   +       G + +PN V YSTIIDG+CK+ 
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVD------GKLVQPNVVMYSTIIDGMCKDK 241

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V+ A  L+ +M  + I+P+VVTY++LI G        +A  LF +M+ + ++P V TFN
Sbjct: 242 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFN 301

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  CK+ K+  A +L+D M  RG  PN  TY++++D  C   ++++A  L   ++  
Sbjct: 302 ILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQ 361

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + +  +Y ILI+G C + ++E+A +++ +++ KG   TVVTY  +F G  +    + A
Sbjct: 362 GIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEA 421

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  +M+ +G   D +TY      L K G    A +L R   I
Sbjct: 422 SALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECEI 465



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 224/454 (49%), Gaps = 12/454 (2%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           H  P    SF  L     KN H++  +  +    NL  Y+     F     V      F 
Sbjct: 23  HFVPKKFPSFQFL-----KNTHFNF-IPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFN 76

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +LR   TP A  FN ++  L           L  K++  G +PN++  N LIN  C+ G
Sbjct: 77  CLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLG 136

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A ++F ++      + +   PNT+T++T+I GLC +G + +A     ++       
Sbjct: 137 LIPFAFSVFAKI------LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQF 190

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           + ++Y +LI GLC   +   A  L   +  + VQP+VV ++ I+D +CK++ +++A  L 
Sbjct: 191 NQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 250

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             MV +G+ PN  TY+ L+ GF  +GK+  A +LF  M S   K D  ++NIL++ +CK+
Sbjct: 251 SEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKS 310

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++  AL L  EM  +G  P +VTY+++   L + H+V+ A+ L  +++  G+  +  TY
Sbjct: 311 GKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTY 370

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  IDGLC +G + +A  +F  L +   ++ +  Y  +  G CK G    A  L   +  
Sbjct: 371 TILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEE 430

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
              +P+  TY ++   L   G+ D A  L  + E
Sbjct: 431 NGCIPDAKTYELIKLSLFKKGENDMAEKLHRECE 464



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 189/359 (52%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + ++ I+  L K         L  +M+   I P++V  N LI+  C       A  +
Sbjct: 85  PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +++  G  P+ +TF  ++  LC   ++ +A    D +V  G + N  +Y TL+DG C 
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G+   A +L   ++    + + V Y+ +I+G CK+K V +A  LY EMVSKGI P VVT
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  G F + +++ A+ LF++M  + +  D  T+   +D  CK+G I  A++L   + 
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH 324

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 +I  Y+ ++D LCK+ R+  A  L   L    + PN+ TY I+I GLC  G+++
Sbjct: 325 DRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLE 384

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            AR++F D+        V+T+ ++ +GF +     + + LL KM+E   +PDA    ++
Sbjct: 385 DARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 166/327 (50%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++ Y+S        ND ++A  LF  ++ Q   P  + FN I+  L K++       L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  RG++PN    N L++ FC +G I  A  +F  +  MG   + +++  LI G C  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ +AL+ + ++V+ G +   ++Y TL  GL ++ +   AL L   +    V  +   Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +T IDG+CK+ ++ +A +L+  +       ++  Y+ LI G    G+LK A +LF  +  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+V T+NI++   C  G++  A  L  +M +    P+++T+  ++    + +   K
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
              LL K+K++ + P+    +I++D L
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGL 377



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 148/298 (49%)

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           N  +D+A  L + ++++   P A  +N ++         +    L   ME  G K + V+
Sbjct: 65  NNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVN 124

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
            NILIN +C+   +  A S++ +++  G  P  +T+ TL  GL    Q+  AL   D++ 
Sbjct: 125 CNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLV 184

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   +  +Y T IDGLCK G    A++L R +     + ++  Y+ +IDG+CK   + 
Sbjct: 185 ALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVN 244

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A++L+  +    + PNVVTY+ +I G    G++  A DLF  M      PDV TF++L+
Sbjct: 245 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILV 304

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             F +  + S   +L+ +M ++   P+    S ++D L K     K++      + QG
Sbjct: 305 DVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQG 362



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 129/260 (49%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N   Y++    F     ++ A  LF  +         + +N ++    K+K     L L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           ++M  +GIKP +V  N L     ++  +  A  +F ++ + G   +T T+TT I GLC  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I +A+     L  L  + +  +Y  LIDGLCK G  + A +L   +   ++ PNVV Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           + +I G+C D  ++ A DL+ +M     +P+V+T+  LI GF  + +     +L +KM  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 551 KKVMPDASIVSIVVDLLVKN 570
           + + PD    +I+VD+  K+
Sbjct: 291 ENIKPDVYTFNILVDVFCKS 310


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 254/485 (52%), Gaps = 6/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI+   + G        + R++     P+  TF++L+       
Sbjct: 184 KMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRR 243

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I     L  ++++ G  PN+ TY   I  L R G    A  + + M +        C P
Sbjct: 244 NIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG------CGP 297

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC    +D A  LF +MK  +  PD VTY +L+         ++ ++++
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P VVTF ++++ LCK  +++EA  LLD M ++GV PN  TYNTL+ G    
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA 417

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A +LF +MES+G +    +Y +LI+ + K+    +AL  + +M ++GI P +V  
Sbjct: 418 NRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVAC 477

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L E+ ++  A  +F+E++  G+A D+ TY   +    K G + EA++L   +  
Sbjct: 478 NASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSK 537

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           ++CE D+   N LID L K+GR++ AW++FC +    L P VVTYNI++ GL  +GQ+ K
Sbjct: 538 VQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK 597

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  LF  M  +  +P+ ITF+ L+    + +E     ++ +KM      PD    + ++ 
Sbjct: 598 AVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIH 657

Query: 566 LLVKN 570
             +K 
Sbjct: 658 GFIKQ 662



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 166/532 (31%), Positives = 270/532 (50%), Gaps = 22/532 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYN 100
           P +A   F+ M +     P + + N  L SLA+       K     L ++GL P+  TYN
Sbjct: 455 PGKALETFEKM-KARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYN 513

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +++ C+ K+G+V         + +    P+    NSLI  L+   R+ EA  +F +++  
Sbjct: 514 MMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEM 573

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
              P V+TYN L+ GL + G    A+ LFE M NG+G     C PNT+T++T++D LCK 
Sbjct: 574 NLAPTVVTYNILLAGLGKEGQIQKAVQLFESM-NGHG-----CSPNTITFNTLLDCLCKN 627

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             VD A  +F +M   N  PDV+T+N++IHG    N    A  LF   M + ++P  VT 
Sbjct: 628 DEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF-HQMKKLLRPDHVTL 686

Query: 281 NVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
             ++  + K+ ++++A R+  D   Q G   +   +  +M G        +A  LFG  E
Sbjct: 687 CTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI-LFG--E 743

Query: 340 SMGCK---HDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEI 395
            + C+    DD     +I   CK+K+   A +++ +   + G+KPT+  YN L  G  E+
Sbjct: 744 RLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEV 803

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
           H VE A  LF+EM+  G A DT TY + ID   K+G I E  +L+  +    C+ +   Y
Sbjct: 804 HNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITY 863

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +I  L KS RL  A +L+ +L  G   P   T+  +I GL   G++D A ++F  M  
Sbjct: 864 NMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVH 923

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
               P+   +++L++G+ ++       E   +M ++ + PD    +I+VD+L
Sbjct: 924 YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 268/551 (48%), Gaps = 51/551 (9%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
            EA  +F+ +     +P  V+ +N+++   +K    D      + ++     P++   N L
Sbjct: 492  EAKAMFNELKSSGLAPDSVT-YNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
            I+   K GRV   +  F R+      P   T+N L+ GL  E +I +A  LF  +   GC
Sbjct: 551  IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610

Query: 163  EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             PN IT+NTL++ LC+     +AL +F +M   N      C+P+ +T++TII G  K+  
Sbjct: 611  SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN------CRPDVLTFNTIIHGFIKQNQ 664

Query: 223  VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL---------------FIE 267
            +  A  LF QMK + + PD VT  +L+ G+  +    +A R+               F E
Sbjct: 665  IKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723

Query: 268  ------MMDQGVQPSVV---------------TFNVIMDELCKNRKMDEASRL-LDLMVQ 305
                  + + G + +++                   I+  LCK++K   A  + +    +
Sbjct: 724  DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783

Query: 306  RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             GV+P    YN L+DGF  +  +  A  LF  M+S GC  D  +YN LI+ + K+ ++ E
Sbjct: 784  LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843

Query: 366  ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
               LY EM+++G KP  +TYN +   L + ++++ A+ L+  +     +    T+   ID
Sbjct: 844  LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903

Query: 426  GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            GL K+G + +A E+F  +    C  +   YN L++G  K G +  A E F  +    + P
Sbjct: 904  GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP 963

Query: 486  NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            ++ +Y I++  LC  G++D A   F  +++    PD++ ++++I+G  R     +   L 
Sbjct: 964  DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLF 1023

Query: 546  HKMKEKKVMPD 556
            H+M+ + ++PD
Sbjct: 1024 HEMQNRGIVPD 1034



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 274/595 (46%), Gaps = 74/595 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++A C+F  M      P  V+ +  LL   +   H D      T + A G  P++ T+ I
Sbjct: 316 DDAMCLFTKMKSSSHKPDKVT-YVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N  CK GR++  F     + +    PN  T+N+LI GL   +R+ +A  LF+ +++ G
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCK---------------- 204
            EP   TY  LI+   ++GH   AL  FE+M A G     V C                 
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK 494

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       P++VTY+ ++    K G VD+A  L  +M      PDV+  NSLI  L
Sbjct: 495 AMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A    EA ++F  M +  + P+VVT+N+++  L K  ++ +A +L + M   G  PN 
Sbjct: 555 YKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNT 614

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            T+NTL+D  C   +++ A ++F  M +M C+ D +++N +I+G+ K  +++ A+ L+ +
Sbjct: 615 ITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ 674

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL---------------FDEMQRDGVAADT 417
           M  K ++P  VT  TL  G+ +  Q+E A ++               F E    G+  + 
Sbjct: 675 M-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEA 733

Query: 418 RTYTTFIDG---------------------LCKNGYIIEAVELF-RTLRILKCELDIQAY 455
            T    + G                     LCK+     A  +F +  + L  +  ++ Y
Sbjct: 734 GTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVY 793

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N LIDG  +   ++ AW LF  +      P+  TYN +I      G++++  DL+ +M  
Sbjct: 794 NLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLT 853

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               P+ IT++M+I   ++ N   K  +L + +      P       ++D L+K+
Sbjct: 854 RGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKS 908



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 252/522 (48%), Gaps = 41/522 (7%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
            EA+ +F  M  M+ +P  V ++NILLA L K             +N  G  PN  T+N L
Sbjct: 562  EAWQMFCRMEEMNLAPT-VVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTL 620

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
            ++C CK   V L    F ++      P+  TFN++I G   +++I  A  LF ++K    
Sbjct: 621  LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-L 679

Query: 163  EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-----------------EIGV---- 201
             P+ +T  TL+ G+ ++G    A  + E+     G                 E G     
Sbjct: 680  RPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI 739

Query: 202  ----------VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLIH 250
                      +CK ++V    II  LCK      A+ +F++   E  + P +  YN LI 
Sbjct: 740  LFGERLVCRAICKDDSVLIP-IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLID 798

Query: 251  GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            G    ++   A  LF EM   G  P   T+N ++D   K+ K++E   L D M+ RG +P
Sbjct: 799  GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP 858

Query: 311  NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
            N  TYN ++       ++++A +L+ ++ S        ++  LI+G  K+  +++A  ++
Sbjct: 859  NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF 918

Query: 371  REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
              MV  G +P    YN L  G  ++  V+ A + F  M ++G+  D ++YT  +D LC  
Sbjct: 919  DGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIA 978

Query: 431  GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            G + +A+  F  L+    + D+ AYN +I+GL +S R + A  LF  + +  +VP++ TY
Sbjct: 979  GRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038

Query: 491  NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            N +I  L   G +++A  ++ +++     P+V T++ LI G+
Sbjct: 1039 NSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 240/513 (46%), Gaps = 12/513 (2%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRV-----SLGFIAFGRILRSCF 127
           +L S++   H      + G  PN+       N   +I RV      + F+ F  + R   
Sbjct: 97  VLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFV-FDLMQRQII 155

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
             N  T+  + K L     + +A +   K++  G   N  +YN LI+ L ++G    AL 
Sbjct: 156 RRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALE 215

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           ++  M +         KP+  T+S ++    K   +     L  +M+   + P++ TY  
Sbjct: 216 VYRRMVSEG------LKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTI 269

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            I  L      +EA R+   M D G  P VVT+ V++D LC  RK+D+A  L   M    
Sbjct: 270 CIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            +P+  TY TL+D F   G +++ E+++  ME+ G   D V++ IL+N  CK   + EA 
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   M  +G+ P + TYNTL  GL   ++++ AL LF  M+  GV     TY   ID  
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K+G+  +A+E F  ++      +I A N  +  L + GRL  A  +F  L    L P+ 
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTYN+M++     GQ+D+A  L  +M +    PDVI  + LI    +     +  ++  +
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           M+E  + P     +I++  L K     K++  F
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 150/324 (46%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F  M  Q ++ +V T+ +I   L     + +A   L+ M + G   NA +YN L+    
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G    A E++  M S G K    +++ L+    K + ++  + L  EM S G++P + 
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIY 265

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY      L    +++ A ++   M  DG   D  TYT  ID LC    + +A+ LF  +
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +    + D   Y  L+D     G L    +++  +      P+VVT+ I++  LC  G++
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           ++A DL   M +    P++ T++ LI G +R N      +L   M+   V P A    ++
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445

Query: 564 VDLLVKNEISLKSLPSFLVQERQG 587
           +D   K+    K+L +F   + +G
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARG 469



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)

Query: 65   PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P + S+ IL+        +    HY  +L   GL P+L  YN++IN   +  R       
Sbjct: 963  PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  +      P+  T+NSLI  L     I EA  ++ +L+  G +PNV TYN LI G   
Sbjct: 1023 FHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTL 1082

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
            +G++ +A  ++++M  G       C PNT T++ +
Sbjct: 1083 SGNSELAYGIYKKMMVGG------CDPNTGTFAQL 1111



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 6/116 (5%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P + ++N+++  L +++  +  L+        G+ P+LYTYN LI     +G +      
Sbjct: 998  PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            +  +      PN  T+N+LI+G         A  ++ K+   GC+PN  T+  L N
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 258/496 (52%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L KN      K + + +   G+FP++ TYN LIN +C+ G +   F    
Sbjct: 358 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 417

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P   T+N++I GL    + + A  +  ++   G  P+  TYN L+   CR  
Sbjct: 418 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 477

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           + M A  +F+EM +     GVV  P+ V++S +I  L K G +D+A   F  MK+  + P
Sbjct: 478 NMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 531

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI G C     +EA ++  EM++QG    VVT+N I++ LCK + + EA  L 
Sbjct: 532 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELF 591

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +RGV P+  T+ TL++G+   G +N+A  LF  M     K D V+YN LI+G+CK 
Sbjct: 592 TEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 651

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+E+   L+ +M+S+ I P  ++Y  L  G   +  V  A +L+DEM   G  A   T 
Sbjct: 652 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 711

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T + G C+ G  ++A E    + +     D   YN LI+G  K   +  A+ L   + +
Sbjct: 712 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 771

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L+P+V+TYN+++ G    G+M +A  + L M E    PD  T+  LI+G +  N   +
Sbjct: 772 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 831

Query: 541 VNELLHKMKEKKVMPD 556
              +  +M ++  +PD
Sbjct: 832 AFRVHDEMLQRGFVPD 847



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 257/480 (53%), Gaps = 12/480 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRS---CFTPNAATFNSLIKGLHAESRIMEAA 151
           N   +++L+  + +  ++  G  AF R+L+S   C + NA   NSL+ GL     +  A 
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINAC--NSLLGGLVKVGWVDLAW 343

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            ++ ++   G + NV T N +IN LC+        +   +M     E GV   P+ VTY+
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME----EKGVF--PDVVTYN 397

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+  C++G +++A  L   M  + + P V TYN++I+GLC    +  AK +  EM+  
Sbjct: 398 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 457

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ P   T+N+++ E C+N  M +A R+ D M  +GV P+  +++ L+      G +++A
Sbjct: 458 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 517

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            + F  M++ G   D+V Y ILI G+C+N  + EAL +  EM+ +G    VVTYNT+  G
Sbjct: 518 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNG 577

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +   +  A +LF EM   GV  D  T+TT I+G  K+G + +AV LF  +     + D
Sbjct: 578 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPD 637

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN LIDG CK   ++   EL+  +    + PN ++Y I+I G CN G + +A  L+ 
Sbjct: 638 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 697

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +M E      +IT + ++ G+ R     K +E L  M  K ++PD    + +++  +K E
Sbjct: 698 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 757



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/479 (31%), Positives = 244/479 (50%), Gaps = 6/479 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L + GL  ++   N L+    K+G V L +  +  ++RS    N  T N +I  L    +
Sbjct: 314 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 373

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I    +  + ++  G  P+V+TYNTLIN  CR G    A  L + M+      G   KP 
Sbjct: 374 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS------GKGLKPC 427

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ II+GLCK G   +AK +  +M    ++PD  TYN L+   C  ++  +A+R+F 
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 487

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  QGV P +V+F+ ++  L KN  +D+A +    M   G+ P+   Y  L+ GFC  G
Sbjct: 488 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A ++   M   GC  D V+YN ++NG CK K + EA  L+ EM  +G+ P   T+ 
Sbjct: 548 VMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 607

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G  +   +  A+ LF+ M +  +  D  TY T IDG CK   + +  EL+  +   
Sbjct: 608 TLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 667

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           +   +  +Y  LI+G C  G +  A+ L+  +        ++T N +++G C  G   KA
Sbjct: 668 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 727

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   +M      PD IT++ LI+GFI+     +   L++KM+   ++PD    +++++
Sbjct: 728 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 786



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 197/375 (52%), Gaps = 19/375 (5%)

Query: 53  IFDYMLRMHPSP---PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
           IFD M    PS    P + SF+ L+  L+KN   D  L         GL P+   Y ILI
Sbjct: 485 IFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             FC+ G +S        +L      +  T+N+++ GL  E  + EA  LFT++   G  
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+  T+ TLING  + G+   A+ LFE M   N       KP+ VTY+T+IDG CK   +
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEM 654

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           +K   L+  M    I P+ ++Y  LI+G C+    +EA RL+ EM+++G + +++T N I
Sbjct: 655 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 714

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C+     +A   L  M+ +G+ P+  TYNTL++GF     ++RA  L   ME+ G 
Sbjct: 715 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 774

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D ++YN+++NG+ +   ++EA  +  +M+ +G+ P   TY +L  G    + ++ A +
Sbjct: 775 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFR 834

Query: 404 LFDEMQRDGVAADTR 418
           + DEM + G   D +
Sbjct: 835 VHDEMLQRGFVPDDK 849



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 173/355 (48%), Gaps = 21/355 (5%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-------VQPSVVT---------- 279
           N    + +++++IH L  +    +A+ + + M+ +        V+  V+T          
Sbjct: 231 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLV 290

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           F++++    + RK+ E      ++  +G  V  NAC  N+L+ G   +G ++ A E++  
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC--NSLLGGLVKVGWVDLAWEIYQE 348

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +   G + +  + NI+IN  CKN+++E   S   +M  KG+ P VVTYNTL         
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A +L D M   G+     TY   I+GLCK G  + A  +   +  +    D   YN 
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L+   C++  +  A  +F  +P   +VP++V+++ +I  L  +G +D+A   F DM+   
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            APD + + +LI GF R    S+  ++  +M E+    D    + +++ L K ++
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 148/306 (48%), Gaps = 20/306 (6%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           S+ +F+ ++  L ++R++ +A  ++  MV++                     ++R E + 
Sbjct: 235 SLQSFSAMIHILVRSRRLPDAQAVILRMVRKS-------------------GVSRVEIVE 275

Query: 336 GSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
             + + G C  + + +++L+  Y + +++ E    +R + SKG+  ++   N+L  GL +
Sbjct: 276 SLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVK 335

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           +  V+ A +++ E+ R GV  +  T    I+ LCKN  I         +       D+  
Sbjct: 336 VGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVT 395

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN LI+  C+ G L+ A+EL  S+    L P V TYN +I GLC  G+  +A+ +  +M 
Sbjct: 396 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 455

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           +   +PD  T+++L+    R +       +  +M  + V+PD    S ++ LL KN    
Sbjct: 456 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 515

Query: 575 KSLPSF 580
           ++L  F
Sbjct: 516 QALKYF 521



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 120/263 (45%), Gaps = 17/263 (6%)

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-------IKPTVVTY-----NTLFLG 391
           KH   S++ +I+   +++ + +A ++   MV K        ++  V+TY     N L   
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 292

Query: 392 LF-----EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           L      +  ++    + F  ++  G+        + + GL K G++  A E+++ +   
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             ++++   N +I+ LCK+ +++        +    + P+VVTYN +I   C  G +++A
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +L   M      P V T++ +I+G  +  +  +   +L +M +  + PD +  +I++  
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472

Query: 567 LVKNEISLKSLPSFLVQERQGEV 589
             +N+  + +   F     QG V
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVV 495


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 175/565 (30%), Positives = 284/565 (50%), Gaps = 39/565 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKH----YD--TRLNATGLFPNLYTYNILINCF 106
           +FD++ R       V ++N  L +LAK       Y+   ++   G  P+ +TY+I++   
Sbjct: 24  LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-CEPN 165
           CK G +       G++  S    N  T++ +I G    SR+ +A  +F  + A G C P+
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPD 143

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V+T+N+L+ GLC       A  LFE MA         C+PN ++YST++DGLCK G +D+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKAGRLDE 197

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF----- 280
           A  L+ +M +++  PD+V Y S + GLC AN   EA     +M+ +G +   V F     
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 281 ------------NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                       N +++ LC++  +DEA +  + M+ R   P+A  +NTL+   C   ++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 329 NRAEELFGSMESMG---CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
                LF  M+SM    C  +  +YNI+++  CK K+++EA  L  EM + G+ P VVTY
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           + L  GL ++ +++ A  L +EM ++GV  D+ T  + ++ L K G +  A+    T++ 
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D+  YN L+DGLCK+GR+  A      +      P+V +Y I+I  LC  GQ   
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAG 497

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +F +M +    PD + +  L+ G  R        ELL   K     PD  +  +VVD
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVVD 554

Query: 566 LLVKNEISLKSLPSFLVQERQGEVG 590
            L K   + K+  +  V ER  + G
Sbjct: 555 GLCK---AGKAEDACEVVERMADAG 576



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/569 (29%), Positives = 264/569 (46%), Gaps = 97/569 (17%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A+  F  M R    PP   +++I+L  L K    D       +L  +G+  N+ TY+++I
Sbjct: 57  AYEKFQQMQR-RGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVI 115

Query: 104 NCFCKIGRVSLGFIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +  CK  RV      F  +     C  P+  TFNSL+KGL +  R+ EA  LF  +   G
Sbjct: 116 DGCCKASRVDDALEIFKTMSAGGGC-VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------------ANGNGEIG 200
           CEPNVI+Y+TL++GLC+ G    A  L+EEM                     AN   E  
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 201 VVC--------KPNTVTYSTII-----------------DGLCKEGFVDKAKALFLQMKD 235
             C        K + V +ST+I                 + LC+ G +D+A   F +M  
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG---VQPSVVTFNVIMDELCKNRK 292
            N  P    +N+LIH +C +    +   LF  M         P++ T+N+++D LCK ++
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG---------------- 336
           +DEA  L++ M   G+ P+  TY+ L+DG C +GK++RA +L                  
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 337 -------------------SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
                              +M++ G   D V+YN L++G CK   ++EA++   +MV+  
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P V +Y  +   L    Q   A  +F EM + GV  DT  Y + +DGL +NG    A+
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           EL +T     C+ D   +  ++DGLCK+G+ + A E+   +       +  TY  +++GL
Sbjct: 535 ELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGL 591

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFD 526
              G++DKAR L  D  E   + + ++ +
Sbjct: 592 RKLGKVDKARQLVDDASETHTSVERLSME 620


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 258/496 (52%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L KN      K + + +   G+FP++ TYN LIN +C+ G +   F    
Sbjct: 97  VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 156

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P   T+N++I GL    + + A  +  ++   G  P+  TYN L+   CR  
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRND 216

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           + M A  +F+EM +     GVV  P+ V++S +I  L K G +D+A   F  MK+  + P
Sbjct: 217 NMMDAERIFDEMPSQ----GVV--PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 270

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI G C     +EA ++  EM++QG    VVT+N I++ LCK + + EA  L 
Sbjct: 271 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 330

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +RGV P+  T+ TL++G+   G +N+A  LF  M     K D V+YN LI+G+CK 
Sbjct: 331 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG 390

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+E+   L+ +M+S+ I P  ++Y  L  G   +  V  A +L+DEM   G  A   T 
Sbjct: 391 SEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 450

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T + G C+ G  ++A E    + +     D   YN LI+G  K   +  A+ L   + +
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 510

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L+P+V+TYN+++ G    G+M +A  + L M E    PD  T+  LI+G +  N   +
Sbjct: 511 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 570

Query: 541 VNELLHKMKEKKVMPD 556
              +  +M ++  +PD
Sbjct: 571 AFRVHDEMLQRGFVPD 586



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 257/480 (53%), Gaps = 12/480 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRS---CFTPNAATFNSLIKGLHAESRIMEAA 151
           N   +++L+  + +  ++  G  AF R+L+S   C + NA   NSL+ GL     +  A 
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINAC--NSLLGGLVKVGWVDLAW 82

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            ++ ++   G + NV T N +IN LC+        +   +M     E GV   P+ VTY+
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME----EKGVF--PDVVTYN 136

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+  C++G +++A  L   M  + + P V TYN++I+GLC    +  AK +  EM+  
Sbjct: 137 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 196

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ P   T+N+++ E C+N  M +A R+ D M  +GV P+  +++ L+      G +++A
Sbjct: 197 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 256

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            + F  M++ G   D+V Y ILI G+C+N  + EAL +  EM+ +G    VVTYNT+  G
Sbjct: 257 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 316

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +   +  A +LF EM   GV  D  T+TT I+G  K+G + +AV LF  +     + D
Sbjct: 317 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 376

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN LIDG CK   ++   EL+  +    + PN ++Y I+I G CN G + +A  L+ 
Sbjct: 377 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 436

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +M E      +IT + ++ G+ R     K +E L  M  K ++PD    + +++  +K E
Sbjct: 437 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/479 (31%), Positives = 244/479 (50%), Gaps = 6/479 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L + GL  ++   N L+    K+G V L +  +  ++RS    N  T N +I  L    +
Sbjct: 53  LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 112

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I    +  + ++  G  P+V+TYNTLIN  CR G    A  L + M+      G   KP 
Sbjct: 113 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS------GKGLKPC 166

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ II+GLCK G   +AK +  +M    ++PD  TYN L+   C  ++  +A+R+F 
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 226

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  QGV P +V+F+ ++  L KN  +D+A +    M   G+ P+   Y  L+ GFC  G
Sbjct: 227 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 286

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A ++   M   GC  D V+YN ++NG CK K + EA  L+ EM  +G+ P   T+ 
Sbjct: 287 VMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFT 346

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G  +   +  A+ LF+ M +  +  D  TY T IDG CK   + +  EL+  +   
Sbjct: 347 TLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR 406

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           +   +  +Y  LI+G C  G +  A+ L+  +        ++T N +++G C  G   KA
Sbjct: 407 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 466

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   +M      PD IT++ LI+GFI+     +   L++KM+   ++PD    +++++
Sbjct: 467 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 525



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 197/375 (52%), Gaps = 19/375 (5%)

Query: 53  IFDYMLRMHPSP---PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
           IFD M    PS    P + SF+ L+  L+KN   D  L         GL P+   Y ILI
Sbjct: 224 IFDEM----PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 279

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             FC+ G +S        +L      +  T+N+++ GL  E  + EA  LFT++   G  
Sbjct: 280 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+  T+ TLING  + G+   A+ LFE M   N       KP+ VTY+T+IDG CK   +
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN------LKPDVVTYNTLIDGFCKGSEM 393

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           +K   L+  M    I P+ ++Y  LI+G C+    +EA RL+ EM+++G + +++T N I
Sbjct: 394 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 453

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C+     +A   L  M+ +G+ P+  TYNTL++GF     ++RA  L   ME+ G 
Sbjct: 454 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 513

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D ++YN+++NG+ +   ++EA  +  +M+ +G+ P   TY +L  G    + ++ A +
Sbjct: 514 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFR 573

Query: 404 LFDEMQRDGVAADTR 418
           + DEM + G   D +
Sbjct: 574 VHDEMLQRGFVPDDK 588



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 165/334 (49%), Gaps = 2/334 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V+  ++L L   +   NP  + ++ L+     A    E    F  +  +G+  S+   N 
Sbjct: 10  VEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS 67

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  L K   +D A  +   +V+ GV+ N  T N +++  C   KI   +     ME  G
Sbjct: 68  LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 127

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D V+YN LIN YC+   +EEA  L   M  KG+KP V TYN +  GL +  +   A 
Sbjct: 128 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 187

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            + DEM + G++ DT TY   +   C+N  +++A  +F  +       D+ +++ LI  L
Sbjct: 188 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+G L  A + F  + +  L P+ V Y I+I G C +G M +A  +  +M E     DV
Sbjct: 248 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +T++ +++G  +    S+ +EL  +M E+ V PD
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPD 341



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 153/303 (50%), Gaps = 6/303 (1%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKIN 329
           G  P V  F++++    + RK+ E      ++  +G  V  NAC  N+L+ G   +G ++
Sbjct: 24  GSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC--NSLLGGLVKVGWVD 79

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A E++  +   G + +  + NI+IN  CKN+++E   S   +M  KG+ P VVTYNTL 
Sbjct: 80  LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                   +E A +L D M   G+     TY   I+GLCK G  + A  +   +  +   
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   YN L+   C++  +  A  +F  +P   +VP++V+++ +I  L  +G +D+A   
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F DM+    APD + + +LI GF R    S+  ++  +M E+  + D    + +++ L K
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319

Query: 570 NEI 572
            ++
Sbjct: 320 EKM 322



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 119/238 (50%)

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  + + +++L+  Y + +++ E    +R + SKG+  ++   N+L  GL ++  V+ A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +++ E+ R GV  +  T    I+ LCKN  I         +       D+  YN LI+  
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+ G L+ A+EL  S+    L P V TYN +I GLC  G+  +A+ +  +M +   +PD 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            T+++L+    R +       +  +M  + V+PD    S ++ LL KN    ++L  F
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 260



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 98/213 (46%), Gaps = 2/213 (0%)

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P V  ++ L     +  ++    + F  ++  G+        + + GL K G++  A
Sbjct: 24  GSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            E+++ +     ++++   N +I+ LCK+ +++        +    + P+VVTYN +I  
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C  G +++A +L   M      P V T++ +I+G  +  +  +   +L +M +  + PD
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
            +  +I++    +N+  + +   F     QG V
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVV 234


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 176/544 (32%), Positives = 270/544 (49%), Gaps = 23/544 (4%)

Query: 58  LRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
            R+ P P    S N LL  L+K      ++ +   + A G+  +++TYNI+I+  CK G 
Sbjct: 214 FRVFPKP---RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGD 270

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           + +    F ++  + FTP+  T+NSLI G      + E   +F ++K   C+P+VITYN 
Sbjct: 271 LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 330

Query: 172 LINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           LIN  C+      A     EM ANG        KPN VTYST ID  CKEG + +A   F
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANG-------LKPNVVTYSTFIDAFCKEGMLQEAIKFF 383

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           + M+   + P+  TY SLI   C A +  EA +L  E++  G++ +VVT+  ++D LC+ 
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            +M EA  +   M+  GV PN  TY  L+ GF    ++  A+++   M+    K D + Y
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 503

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             ++ G C    +EEA  L  E+   GI    V Y TL    F+  Q   AL L +EM  
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+ A   TY   IDGLCK+G + EA+  F  +  +  + ++  Y  L+DGLCK+   + 
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEV 623

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +LF  +    ++P+ + Y  +I G    G + +A +L   M E     D+  +  LI 
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 683

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           G     +  K   LL +M  K V+PD     +V   L+K   +L  +   L  E Q E+ 
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPD----EVVYMCLIKKYYALGKVDEAL--ELQNEMA 737

Query: 591 ESNV 594
           +  +
Sbjct: 738 KRGM 741



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 261/564 (46%), Gaps = 49/564 (8%)

Query: 11  FSFASAPISAFRSNF---SSLLVHFRDLTTREGDINVITPNEAFCIFDYML---RMHPSP 64
           F  A API A R          +  R     +G I     +EA+CI  ++L   R +   
Sbjct: 92  FDSALAPIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDA 151

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATG--LFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
             V    I L  +  +      L AT     P    ++ L +   ++G +      F ++
Sbjct: 152 NAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKM 211

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
            +    P   + N+L+  L    R   +   F  + A G + +V TYN +I+ LC+ G  
Sbjct: 212 RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL 271

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            +A +LF +M     E G    P+ VTY+++IDG  K G +D+   +F QMKD + +PDV
Sbjct: 272 EMARSLFTQMK----EAGFT--PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDV 325

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS----- 297
           +TYN+LI+  C      +A     EM   G++P+VVT++  +D  CK   + EA      
Sbjct: 326 ITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 385

Query: 298 ------------------------------RLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
                                         +L++ ++Q G++ N  TY  L+DG C  G+
Sbjct: 386 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 445

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  AEE+F +M + G   +  +Y  L++G+ K KE+E A  + +EM  K IKP ++ Y T
Sbjct: 446 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 505

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  GL    ++E A  L  E++  G+  +   YTT +D   K+G   EA+ L   +  L 
Sbjct: 506 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
                  Y  LIDGLCKSG ++ A   F  +    L PNV  Y  ++ GLC +   + A+
Sbjct: 566 LIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAK 625

Query: 508 DLFLDMEENAAAPDVITFDMLIHG 531
            LF +M +    PD I +  LI G
Sbjct: 626 KLFDEMLDKGMMPDKIAYTALIDG 649



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 203/376 (53%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC P    +  +   L + G +++A   FL+M+   + P   + N+L+H L      + +
Sbjct: 180 VCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS 239

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           ++ F +M   G++ SV T+N+++D LCK   ++ A  L   M + G  P+  TYN+L+DG
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
              +G ++    +F  M+   C  D ++YN LIN +CK + + +A     EM + G+KP 
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTY+T      +   ++ A+K F +M+R  +  +  TYT+ ID  CK G + EA++L  
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     +L++  Y  L+DGLC+ GR+K A E+F ++ +  + PN  TY  ++ G     
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           +M+ A+D+  +M+E    PD++ +  ++ G    +   +   L+ ++KE  +  +A I +
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539

Query: 562 IVVDLLVKNEISLKSL 577
            ++D   K+  + ++L
Sbjct: 540 TLMDAYFKSGQATEAL 555



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 1/207 (0%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P    ++ LF  L E+  +E A + F +M++  V    R+    +  L K G    + + 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F+ +     +  +  YN +ID LCK G L+ A  LF  +      P++VTYN +I G   
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G +D+   +F  M++    PDVIT++ LI+ F +     K  E LH+MK   + P+   
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQ 586
            S  +D   K E  L+    F V  R+
Sbjct: 363 YSTFIDAFCK-EGMLQEAIKFFVDMRR 388


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 271/557 (48%), Gaps = 36/557 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++AF +    L M         +N LL  LA+           T +++ G+ P++ T+N 
Sbjct: 142 DDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNT 201

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+  C+  +     +    +      P+  TF +L++G   E  I  A  L  ++   G
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG 261

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFE-EMANG-----------------NGEI---- 199
           C P  +T N LING C+ G    AL   + E+A+G                 NG +    
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321

Query: 200 ---GVV----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              G++    C+P+  TYST+I+ LC  G +++AK +  QM D    PD  T+N+LI  L
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C  N   EA  L  E+  +G+ P+V TFN++++ LCK      A RL + M   G  P+ 
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN L+D  C  GK+ +A +L   ME  GC    V+YN +I+G CK + +EEA  ++ +
Sbjct: 442 VTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ 501

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   GI    +T+NTL  GL    +++ A +L D+M  +G+  +  TY + +   CK G 
Sbjct: 502 MDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           I +A ++ +T+     E+D+  Y  LI+GLCK+ R + A +L   +    + P    YN 
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNP 621

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK-VNELLHKMKEK 551
           +IQ L        A  LF +M E    PD  T+ ++  G  R   P K   + L +M + 
Sbjct: 622 VIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADN 681

Query: 552 KVMPDASIVSIVVDLLV 568
             +P+ S   ++ + L+
Sbjct: 682 GFIPEFSSFRMLAEGLL 698



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 234/440 (53%), Gaps = 6/440 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N   +N L+  L   S+I    + +T++ + G EP+V+T+NT+I+ LCR      A+ + 
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLML 219

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           EEM++ +        P+  T++T+++G  +EG ++ A  L  +M +   +P  VT N LI
Sbjct: 220 EEMSSCD------VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           +G C      +A     + +  G +P  VTF+  ++ LC+N  +D A ++L LM+Q G  
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  TY+T+++  C  G++  A+ +   M   GC  D  ++N LI   C   ++EEAL L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
            RE+  KG+ P V T+N L   L ++     A++LF+EM+  G   D  TY   ID LC 
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +G + +A++L + + +  C      YN +IDGLCK  R++ A E+F  +    +  N +T
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAIT 513

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           +N +I GLCN  ++D A +L   M      P+ +T++ ++  + +    SK  ++L  M 
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT 573

Query: 550 EKKVMPDASIVSIVVDLLVK 569
                 D    + +++ L K
Sbjct: 574 ANGFEVDVVTYATLINGLCK 593



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 1/374 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+   Y  II  L   G  D  K L  +M+ E     +    S I        +++A  L
Sbjct: 88  PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147

Query: 265 FIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
               +D  GVQ +   +N ++  L +  K+         M  +G+ P+  T+NT++D  C
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              +   A  +   M S     D+ ++  L+ G+ +   +E AL L   M   G  PT V
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T N L  G  ++ +V  AL    +   DG   D  T++TF++GLC+NG++  A+++   +
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               CE D+  Y+ +I+ LC +G L+ A  +   +     +P+  T+N +I  LC + Q+
Sbjct: 328 LQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQL 387

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           ++A DL  ++     +P+V TF++LI+   ++ +P     L  +MK     PD    +I+
Sbjct: 388 EEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNIL 447

Query: 564 VDLLVKNEISLKSL 577
           +D L  +    K+L
Sbjct: 448 IDNLCSSGKLAKAL 461



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 13/251 (5%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P    ++N ++  L K +  +       +++ TG+  N  T+N LI+  C   R+     
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              +++     PN  T+NS++     +  I +AA +   + A G E +V+TY TLINGLC
Sbjct: 533 LVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +   T  AL L   M           KP    Y+ +I  L +      A +LF +M +  
Sbjct: 593 KARRTQAALKLLRGMRMKG------MKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646

Query: 238 INPDVVTYNSLIHGLCHAND-WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             PD  TY  +  GLC       EA    +EM D G  P   +F ++ + L      D  
Sbjct: 647 GPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYL 706

Query: 297 SRLLDLMVQRG 307
            R ++L+V++ 
Sbjct: 707 IRAIELIVEKA 717


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 250/461 (54%), Gaps = 8/461 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +YN L+    +   +      +  +L     PN  T N+++        I+EA    +K+
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+  TY +LI G CR      A  +F  M N        C+ N V+Y+TII GL
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG------CRRNEVSYTTIIHGL 294

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN-EAKRLFIEMMDQGVQPS 276
           C+ G +D+  +LF +M++++  P V TY  +IH L   ND N E   LF EM ++  +P+
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL-FGNDRNLEGMDLFNEMRERSCEPN 353

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V T+ V++D +CK RK+DE+ R+L+ M+++G+ P+  TYN L+ G+C  G+I  A E+ G
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            MES  C+ ++ +YN LI G+ K K V +A++L  +M+   + P++VTYN+L     +  
Sbjct: 414 LMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             + A KL D ++ +G+  D  TY+ FID LCK+  + EA +LF +L+    + +   Y 
Sbjct: 474 HFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYT 533

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LIDG CK+G++  A  L   +     +PN  TYN +I G+C +G++ +   +  +M + 
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              P V T+ +LI   +R  +    N + ++M      PD 
Sbjct: 594 GVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 249/505 (49%), Gaps = 14/505 (2%)

Query: 67  VSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           V S+N LL  LA+        + Y   LN   + PN+YT N ++N + K+G +    +  
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDM-IVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            +I ++  +P++ T+ SLI G    + +  A  +F  +   GC  N ++Y T+I+GLC  
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G     ++LF++M   +      C P   TY+ II  L       +   LF +M++ +  
Sbjct: 298 GRIDEGISLFKKMREDD------CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCE 351

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+V TY  ++  +C     +E++R+  EMM++G+ PSVVT+N ++   C+  +++ A  +
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L LM     RPN  TYN L+ GF     +++A  L   M         V+YN LI+  CK
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
               + A  L   +   G+ P   TY+     L +  ++E A  LF+ ++  G+ A+   
Sbjct: 472 AGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVM 531

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           YT  IDG CK G I EA+ L   +    C  +   YN LI G+CK G+++    +  ++ 
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P V TY I+I+ +  +G  D A  +F  M      PDV T+   IH +       
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651

Query: 540 KVNELLHKMKEKKVMPDASIVSIVV 564
           +   ++ +M E  VMPD+   ++++
Sbjct: 652 EAEGMMARMIEAGVMPDSLTYTLLI 676



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 186/404 (46%), Gaps = 18/404 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P V ++ +++ +L  N   D  L    LF         PN++TY ++++  CK  ++   
Sbjct: 317 PTVRTYTVIIHALFGN---DRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDES 373

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                 ++     P+  T+N+LI+G   E RI  A  +   +++  C PN  TYN LI G
Sbjct: 374 RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
             +  H   A+ L  +M            P+ VTY+++I   CK G  D A  L   +K+
Sbjct: 434 FSKRKHVHKAMTLLSKMLESK------LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKE 487

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + PD  TY+  I  LC +    EA  LF  + ++G++ + V +  ++D  CK  K+DE
Sbjct: 488 NGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDE 547

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  LL+ M      PN+ TYN+L+ G C  GK+     +  +M  MG K    +Y ILI 
Sbjct: 548 AISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIE 607

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
              +  + + A  ++ +MVS G KP V TY            V+ A  +   M   GV  
Sbjct: 608 EMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMP 667

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           D+ TYT  I    + G   +A  + + +    C+     +N LI
Sbjct: 668 DSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 168/330 (50%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V +YN L+  L      +E KR++ EM++  + P++ T N +++   K   + EA+  + 
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            + Q G+ P++ TY +L+ G+C    +N A ++F  M + GC+ ++VSY  +I+G C+  
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++E +SL+++M      PTV TY  +   LF   +    + LF+EM+      +  TYT
Sbjct: 299 RIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYT 358

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             +D +CK   + E+  +   +        +  YN LI G C+ GR++ A E+   +   
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESN 418

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              PN  TYN +I G      + KA  L   M E+   P ++T++ LIH   +       
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +LL  +KE  ++PD    S+ +D L K++
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSK 508



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/211 (20%), Positives = 83/211 (39%), Gaps = 36/211 (17%)

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           K +V +YN L + L     ++   +++ EM  D +  +  T  T ++   K G I+EA  
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA-- 233

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
                            N  +  + ++G                L P+  TY  +I G C
Sbjct: 234 -----------------NLYVSKIFQAG----------------LSPDSFTYTSLILGYC 260

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +  ++ A  +F  M       + +++  +IHG        +   L  KM+E    P   
Sbjct: 261 RNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVR 320

Query: 559 IVSIVVDLLVKNEISLKSLPSF-LVQERQGE 588
             ++++  L  N+ +L+ +  F  ++ER  E
Sbjct: 321 TYTVIIHALFGNDRNLEGMDLFNEMRERSCE 351


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/485 (32%), Positives = 256/485 (52%), Gaps = 49/485 (10%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           R G ++ I  N+A  +F  M    P P  V  F+ LL ++AK K Y+        +   G
Sbjct: 46  RSG-LHSIKFNDALTLFCDMAESRPLPSIVD-FSRLLVAIAKLKKYEAVISLFRHIEILG 103

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +  +LY+++ LI+CFC+  R+SL     G++++                           
Sbjct: 104 ISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMK--------------------------- 136

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                    G EP+++T+ +L+NG C       A++L +++      +G+  +PN V Y+
Sbjct: 137 --------LGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI------VGLGYEPNVVIYN 182

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           TIID LC+   VD A  +   M+   I PDV+TYNSLI  L H+  W  + R+  +MM  
Sbjct: 183 TIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRM 242

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ P V+TF+ ++D   K  ++ EA +  D M+QR V PN  TYN+L++G C+ G ++ A
Sbjct: 243 GIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEA 302

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +++   M S G   + V+YN L+NGYCK+K V++A+ +   M   G+     TYNTL+ G
Sbjct: 303 KKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQG 362

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  Q   A K+   M   GV  D  T+   +DGLC++G I +A+     L+  +  + 
Sbjct: 363 YCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVG 422

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN +I G+CK+ +++ AW LFCSL    + P+V+TY  M+ GL       +A +L+ 
Sbjct: 423 IITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYR 482

Query: 512 DMEEN 516
            M+++
Sbjct: 483 KMKKD 487



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 223/430 (51%), Gaps = 11/430 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+   F+ L+  +    +     +LF  ++  G   ++ +++TLI+  CR     +AL+ 
Sbjct: 71  PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E      P+ VT+ ++++G C    + +A +L  Q+      P+VV YN++
Sbjct: 131 LGKMMKLGFE------PSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTI 184

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I  LC     + A  +   M   G++P V+T+N ++  L  + K   ++R+L  M++ G+
Sbjct: 185 IDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGI 244

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  T++ ++D F   G++  A++ +  M       + V+YN LING C +  ++EA  
Sbjct: 245 HPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKK 304

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +   MVSKG  P  VTYNTL  G  +  +V+ A+K+   M  DGV  DT TY T   G C
Sbjct: 305 VLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364

Query: 429 KNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           + G    A ++    R++ C +  DI  +N L+DGLC+ G+++ A      L     V  
Sbjct: 365 QAGQFNAAEKVLA--RMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVG 422

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           ++TYNI+I+G+C   +++ A  LF  +     +PDVIT+  ++ G  R     + +EL  
Sbjct: 423 IITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYR 482

Query: 547 KM-KEKKVMP 555
           KM K+  +MP
Sbjct: 483 KMKKDDGLMP 492



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 190/379 (50%), Gaps = 11/379 (2%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL LF +MA           P+ V +S ++  + K    +   +LF  ++   I+ D+ +
Sbjct: 57  ALTLFCDMAESRP------LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYS 110

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +++LI   C  +  + A     +MM  G +PS+VTF  +++  C   ++ EA  L+D +V
Sbjct: 111 FSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV 170

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             G  PN   YNT++D  C   +++ A ++   ME MG + D ++YN LI     + +  
Sbjct: 171 GLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWG 230

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            +  +  +M+  GI P V+T++ +     +  Q+  A K +DEM +  V  +  TY + I
Sbjct: 231 VSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLI 290

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLC +G + EA ++   +       +   YN L++G CKS R+  A ++ C + H  + 
Sbjct: 291 NGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVD 350

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            +  TYN + QG C  GQ + A  +   M      PD+ TF+ML+ G     E  K+ + 
Sbjct: 351 GDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLC---EHGKIEKA 407

Query: 545 LHKMKEKKVMPDASIVSIV 563
           L K+++  +    ++V I+
Sbjct: 408 LVKLED--LQKSETVVGII 424



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 173/347 (49%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           + A  LF  M +    P +V ++ L+  +     +     LF  +   G+   + +F+ +
Sbjct: 55  NDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTL 114

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D  C+  ++  A   L  M++ G  P+  T+ +L++GFC + +I  A  L   +  +G 
Sbjct: 115 IDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGY 174

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + + V YN +I+  C+N++V+ AL +   M   GI+P V+TYN+L   LF   +   + +
Sbjct: 175 EPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSAR 234

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +  +M R G+  D  T++  ID   K G ++EA + +  +     + +I  YN LI+GLC
Sbjct: 235 ILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G L  A ++   +      PN VTYN ++ G C   ++D A  +   M  +    D  
Sbjct: 295 IHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTF 354

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           T++ L  G+ +  + +   ++L +M    V+PD    ++++D L ++
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEH 401



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 155/304 (50%)

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
           H+  +N+A  LF +M +    PS+V F+ ++  + K +K +    L   +   G+  +  
Sbjct: 50  HSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLY 109

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +++TL+D FC   +++ A    G M  +G +   V++  L+NG+C    ++EA+SL  ++
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           V  G +P VV YNT+   L E  QV+ AL + + M++ G+  D  TY + I  L  +G  
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             +  +   +  +    D+  ++ +ID   K G+L  A + +  +    + PN+VTYN +
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I GLC  G +D+A+ +   M      P+ +T++ L++G+ +        ++L  M    V
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 554 MPDA 557
             D 
Sbjct: 350 DGDT 353



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 148/301 (49%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K ++A  L   M +    P+   ++ L+     + K      LF  +E +G  HD  S++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+ +C+   +  ALS   +M+  G +P++VT+ +L  G   +++++ A+ L D++   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +   Y T ID LC+N  +  A+++   +  +    D+  YN LI  L  SG+   +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +   +    + P+V+T++ MI     +GQ+ +A+  + +M + +  P+++T++ LI+G
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
                   +  ++L+ M  K   P+A   + +V+   K++    ++    V    G  G+
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGD 352

Query: 592 S 592
           +
Sbjct: 353 T 353



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 27/230 (11%)

Query: 31  HFRDLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVSSFNILLASL 77
            + ++  R  D N++T N             EA  + ++M+     P  V+ +N L+   
Sbjct: 270 QYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVT-YNTLVNGY 328

Query: 78  AKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
            K+K  D  +      +  G+  + +TYN L   +C+ G+ +       R++     P+ 
Sbjct: 329 CKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDI 388

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            TFN L+ GL    +I +A      L+       +ITYN +I G+C+      A  LF  
Sbjct: 389 YTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCS 448

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINP 240
           +A      GV   P+ +TY+T++ GL ++    +A  L+ +M KD+ + P
Sbjct: 449 LALK----GV--SPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 184/572 (32%), Positives = 267/572 (46%), Gaps = 65/572 (11%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++  LAK  H    L       A    P   TY IL+N  CK G +     
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  +  S F PN+  + SLI G     R+ EA +LF ++   G  P+VIT+  +I+GLC
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII----------------------- 214
           ++G+   A   FEEM  G       CKPN VTY+TII                       
Sbjct: 377 KSGNFEQAAKSFEEMMRGG------CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 215 ------------DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA------- 255
                       DG CK G +D+A  L  ++   + +P++  Y+SL++GLC         
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
           +D  E  +   E +D G+  S++        LCK  ++DEA R+   MV  G +P+A TY
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIV------GLCKTGRLDEACRIFQRMVSEGCKPDATTY 544

Query: 316 NTLMDGFCLM--GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           N L++G C     ++ RA  L   +E +G   D V+Y  L  G CK  EV+ A+ +  E 
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+G    VV Y  L  GL    QV+ A+ LF EM R G A D   Y   I+GL K   +
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKL 664

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNI 492
            +A + F  +     +  +  Y  L+  LC +G +  A+  F S L  G LV +V+ Y+ 
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDA 724

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G C   ++D A  LF DM      P  +T   L  G +R  +  K  ELL +M    
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
             P A+  + ++D L K++ S K L   LVQE
Sbjct: 785 SPPHAATFTAILDGLRKSDESGKLLK--LVQE 814



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 174/645 (26%), Positives = 284/645 (44%), Gaps = 123/645 (19%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNI 101
           ++ + I + ML+   +P   S FNIL+ S A+ +  D  +    +       P+L+T+ I
Sbjct: 136 SQCYAIHEEMLKAGIAPNTFS-FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLI 194

Query: 102 LINCFCKIGR-----------VSLGFI-------------------------AFGRILRS 125
           L++C CK G            +++GF+                          FG++ + 
Sbjct: 195 LVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC 254

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
            F P+A  +N++I GL       EA  +   + A  C P  +TY  L+N LC+ G    A
Sbjct: 255 GFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERA 314

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             LF  MA          +PN+V Y+++I G  K G + +A +LF +M +    PDV+T+
Sbjct: 315 EELFRVMAASG------FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             +I GLC + ++ +A + F EMM  G +P+VVT+  I+  L K  ++  A R++  M+ 
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE- 364
            G  P++ TY  L+DGFC +G+++ A +L   ++      +   Y+ L+NG C    VE 
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEK 488

Query: 365 -----------------------------------EALSLYREMVSKGIKPTVVTYNTLF 389
                                              EA  +++ MVS+G KP   TYN L 
Sbjct: 489 TLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 390 -------------------------------------LGLFEIHQVEHALKLFDEMQRDG 412
                                                +GL +I +V+ A+K+ +E    G
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
             AD   YT    GLC  G +  AV LF+ +       D  AY C+I+GL K  +L+ A 
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDAC 668

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFDMLIHG 531
           + F  +      P V TY  ++Q LC+ G +D+A   F  M         V+ +D LIHG
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHG 728

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           F +  +     +L   M  +  +P A   + + D LV++  + K+
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 238/473 (50%), Gaps = 12/473 (2%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            G   +++TYN L+N        S  +     +L++   PN  +FN LI+      R  +
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A   F  +K   C+P++ T+  L++ LC+ G    A  +F EM      +G V  P+   
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRAL 227

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++ ++  L K   V +A+ +F QM+     PD + YN++I GL  A    EA ++   M+
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +   P+ VT+ ++++ LCK   ++ A  L  +M   G RPN+  Y +L+ GF   G++ 
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  M   G + D +++ ++I+G CK+   E+A   + EM+  G KP VVTY T+ 
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +I +V +A ++   M   G   D+ TY   +DG CK G + EA +L   L      
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467

Query: 450 LDIQAYNCLIDGLCKSGRL-KFAWELF--CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            ++Q Y+ L++GLC  G + K   +LF         L P +     +I GLC  G++D+A
Sbjct: 468 PNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCS--IIVGLCKTGRLDEA 525

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRI--NEPSKVNELLHKMKEKKVMPDA 557
             +F  M      PD  T+++LI+G  R   N   +   LLH +++   +PDA
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDA 578



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 223/449 (49%), Gaps = 14/449 (3%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  +  T+N L+  L AE    +  A+  ++   G  PN  ++N LI    RT     A+
Sbjct: 115 FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAV 174

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-INPDVVTY 245
             FE M          CKP+  T+  ++D LCK G  +KA  +F +M     + PD   +
Sbjct: 175 TCFEIMKRKR------CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            +++  L  A    EA+ +F +M   G  P  + +N ++D L K     EA ++LD M+ 
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +   P   TY  L++  C  G + RAEELF  M + G + + V Y  LI+G+ K+  ++E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A SL+ EMV  G +P V+T+  +  GL +    E A K F+EM R G   +  TYTT I 
Sbjct: 349 ACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GL K G +  A  + + +    C  D   Y CL+DG CK GRL  A +L   L      P
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP 468

Query: 486 NVVTYNIMIQGLCNDGQMDKA-RDLFLDMEENAAAPDVITFDM---LIHGFIRINEPSKV 541
           N+  Y+ ++ GLC+ G ++K   DLF   E++ AA + +   +   +I G  +     + 
Sbjct: 469 NLQLYSSLVNGLCDGGSVEKTLDDLF---EQSKAAAETLDPGLCCSIIVGLCKTGRLDEA 525

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +  +M  +   PDA+  +I+++ L ++
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRS 554



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 36/381 (9%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DV TYN L++ L    ++++   +  EM+  G+ P+  +FN+++    + R+ D+A    
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMG---------------------------------- 326
           ++M ++  +P+  T+  L+D  C  G                                  
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237

Query: 327 --KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             ++  A E+FG ME  G   D ++YN +I+G  K    +EAL +   M++K   PT VT
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L   L +   +E A +LF  M   G   ++  YT+ I G  K+G + EA  LF  + 
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 D+  +  +IDGLCKSG  + A + F  +  G   PNVVTY  +IQGL   G++ 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  +   M  +   PD +T+  L+ GF ++    +  +LL ++ +    P+  + S +V
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 565 DLLVKNEISLKSLPSFLVQER 585
           + L       K+L     Q +
Sbjct: 478 NGLCDGGSVEKTLDDLFEQSK 498



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 1/299 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G Q  V T+N +M+ L   +   +   + + M++ G+ PN  ++N L+  F    + + A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYNTLFL 390
              F  M+   CK D  ++ IL++  CK    E+A  ++ EM++ G + P    +  +  
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +V+ A ++F +M++ G   D   Y T IDGL K G+  EA+++   +    C  
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               Y  L++ LCK+G L+ A ELF  +      PN V Y  +I G    G+M +A  LF
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +M E    PDVIT  ++I G  +     +  +   +M      P+    + ++  L K
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 1/284 (0%)

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           Q G + +  TYN LM+        ++   +   M   G   +  S+NILI  + + +  +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTRTYTTF 423
           +A++ +  M  K  KP + T+  L   L +    E A ++F EM   G V  D   +T  
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +  L K   + EA E+F  +       D  AYN +IDGL K+G  + A ++  ++     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP  VTY I++  LC  G +++A +LF  M  +   P+ + +  LIHGF +     +   
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           L  +M E    PD    ++++D L K+    ++  SF    R G
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 8/159 (5%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL--AKN-----KHYDTRLNATGL 92
           G I V    +A   FD M+      P V+++  L+ +L  A N       +++ L    L
Sbjct: 657 GLIKVKKLEDACKFFDEMIG-KGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGEL 715

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
             ++  Y+ LI+ FCK  +V      F  ++     P A T  SL  GL    +  +A  
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
           L  ++ A G  P+  T+  +++GL ++  +   L L +E
Sbjct: 776 LLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/443 (33%), Positives = 240/443 (54%), Gaps = 43/443 (9%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P++++YNT+INGLC+      A++L  EM       G  C+PN+ TY  ++DGLCKEG V
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEME------GSSCEPNSFTYCILMDGLCKEGRV 61

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           ++A  L  +MK + +  DVV Y++LI G C     +  K LF EM+++G+ P+VV ++ +
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++  CK     EA+ +L  M +RG++P+  TY  ++ G C  G+  +A +LF  M   G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           +   V+YN+LING CK   + +A  ++  M+ KG +  VV+YNTL +GL    +++ A+K
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 404 LFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRTL-------RILKCELDI-- 452
           LF  +  DG  V  D  T+ T I GLCK G + +AVE++ T+        +  C + I  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 453 --------------------------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
                                       Y+ +IDG CK   L FA  LF  +    L P 
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +  YN ++  LC +  +++AR LF +M+E+   PD I+F+++I G ++  +     ELL+
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            M++  + PDA   S  ++ L K
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSK 444



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 163/534 (30%), Positives = 275/534 (51%), Gaps = 17/534 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S+N ++  L K K  +        +  +   PN +TY IL++  CK GRV      
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G + R     +   +++LI G  ++  +    ALF ++   G  PNV+ Y+ LING C+
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +   M     E G+  +P+  TY+ +I GLCK+G   KA  LF  M ++  
Sbjct: 128 KGLWREATAVLHTMT----ERGI--QPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P  VTYN LI+GLC      +A ++F  M+++G +  VV++N ++  LC N K+DEA +
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 299 LLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
           L   +++ G  V P+  T+NT++ G C  G++++A E++ +M   G   +  + +ILI  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           Y K+  +++A+ L++ +   G+ P+  TY+ +  G  ++H +  A  LF  M+  G++  
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y T +  LCK   + +A  LF+ ++   CE D  ++N +IDG  K+G +  A EL  
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLN 421

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L P+  TY+  I  L   GQM++A+  F  M  +   PD   +D LI GF   +
Sbjct: 422 DMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLND 481

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL---KSLPSFLVQERQG 587
           E  +V  LL +M +  V+ D  I + ++  L  +   L   + LP+F  +   G
Sbjct: 482 EIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGG 535



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/339 (36%), Positives = 195/339 (57%), Gaps = 2/339 (0%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           MK  NI PD+V+YN++I+GLC      +A  L +EM     +P+  T+ ++MD LCK  +
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           ++EA RLL  M ++G+  +   Y+TL+ GFC  G ++R + LF  M   G   + V Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LING+CK     EA ++   M  +GI+P V TY  +  GL +  +   AL LFD M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
               T TY   I+GLCK G I +A ++F T+      L++ +YN LI GLC +G+L  A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 473 ELFCSL--PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           +LF SL      + P+V+T+N +IQGLC +G++DKA +++  M E  +  ++ T  +LI 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +I+     K  EL  ++ +  ++P ++  S+++D   K
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCK 339



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 171/398 (42%), Gaps = 72/398 (18%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  ++  L K+      L+        G  P+  TYN+LIN  CK G +   F  
Sbjct: 148 PDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKI 207

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG--CEPNVITYNTLINGL 176
           F  +L         ++N+LI GL    ++ EA  LF+ L   G   EP+VIT+NT+I GL
Sbjct: 208 FETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGL 267

Query: 177 CRTGHTMIALNLF----EEMANGN--------GEI---GVVCK--------------PNT 207
           C+ G    A+ ++    E  + GN        GE    G++ K              P++
Sbjct: 268 CKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSS 327

Query: 208 VTYSTIID-----------------------------------GLCKEGFVDKAKALFLQ 232
            TYS +ID                                    LCKE  +++A+ LF +
Sbjct: 328 TTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQE 387

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           MK+ N  PD +++N +I G   A D + AK L  +M   G+ P   T++  ++ L K  +
Sbjct: 388 MKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQ 447

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M+EA    D M+  G+ P+   Y++L+ GF L  +I     L   M  MG   D    N 
Sbjct: 448 MEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNS 507

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           ++   C + E    + L     S+    T ++ + L +
Sbjct: 508 ILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLM 545



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 97/181 (53%)

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+R  +  D  +Y T I+GLCK   + +AV+L   +    CE +   Y  L+DGLCK GR
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A  L   +    L  +VV Y+ +I G C+ G +D+ + LF +M E   +P+V+ +  
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LI+GF +     +   +LH M E+ + PD    + ++  L K+  + K+L  F +   +G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 588 E 588
           E
Sbjct: 181 E 181


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/520 (31%), Positives = 265/520 (50%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILL--------ASLAKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S+N++L         S+A N  Y+  + + G+ P +YT
Sbjct: 153 PGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYE--MLSKGVIPTVYT 210

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + +++   C +  V         + +    PN+  + +LI  L    R+ EA  L  ++ 
Sbjct: 211 FGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMF 270

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+V T+N +I GLCR         L + M            PN +TY  +++GLC
Sbjct: 271 LMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG------FTPNDITYGVLMNGLC 324

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR-LFIEMMDQGVQPSV 277
           + G VD+A+ L  ++      P+ V +  LI+G   +   +EA   L+ +M+  G +P V
Sbjct: 325 RVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDV 380

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            TFN ++  LCK   M  A  +++ M   G  PN  TY TL+DGFC   ++  A  +   
Sbjct: 381 FTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNE 440

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G + + + YN+L+   CKN +V +AL +  EM  KG KP + T+NTL  GL ++ +
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDR 500

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E AL L+ +M  DGV A+T TY T I    + G I EA++L   +    C LD   YN 
Sbjct: 501 KEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNG 560

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI   CK G  + A  LF  +    LVP+ ++ N++I GLC  G++  A +L  DM    
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            APDV+T++ LI+G  ++    +   L +K++ + + PDA
Sbjct: 621 LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDA 660



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 175/534 (32%), Positives = 256/534 (47%), Gaps = 25/534 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +F +++ +L      D        +   G  PN   Y  LI+   K  RV+     
Sbjct: 206 PTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKL 265

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  TFN +I GL   +RI E A L  ++   G  PN ITY  L+NGLCR
Sbjct: 266 LEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCR 325

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA-LFLQMKDEN 237
            G    A  L  +          V  PN V ++ +I+G  K G +D+A A L+ +M    
Sbjct: 326 VGKVDEAQVLLNK----------VPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNG 375

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDV T+N+LIHGLC       A  +  +M   G  P+++T+  ++D  CK  +++EA 
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAG 435

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +L+ M  +G   N   YN L+   C  GK+ +A ++ G M   GCK D  ++N LI G 
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK    E+AL+LYR+M+  G+    VTYNTL         ++ ALKL ++M   G   D 
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE 555

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   I   CK G   +A+ LF  +          + N LI+GLC+ G++  A EL   
Sbjct: 556 ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRD 615

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           + H  L P+VVTYN +I GLC  G + +A +LF  ++     PD IT++ LI    R   
Sbjct: 616 MIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGM 675

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK-----NEISL---KSLPSFLVQ 583
                 LL +  E   +P+     I+V   +K     N IS    K +PS  +Q
Sbjct: 676 FDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISFGTAKVIPSICIQ 729



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/456 (34%), Positives = 241/456 (52%), Gaps = 20/456 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYD-----TRLNATGLFPNLYTYNI 101
           NEA  + + M  M    P V +FN ++  L + N+ ++      R+   G  PN  TY +
Sbjct: 260 NEALKLLEEMFLMG-CLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGV 318

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA-LFTKLKAF 160
           L+N  C++G+V    +   ++     TPN   F  LI G     R+ EA A L+ K+   
Sbjct: 319 LMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKN 374

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           GC P+V T+NTLI+GLC+ G    A+++  +M ANG       C PN +TY+T++DG CK
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG-------CTPNLITYTTLLDGFCK 427

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +  +++A  +  +M  +    +++ YN L+  LC      +A  +  EM D+G +P + T
Sbjct: 428 KNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFT 487

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           FN ++  LCK  + ++A  L   M+  GV  N  TYNTL+  F   G I  A +L   M 
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC  D+++YN LI  +CK    E+AL L+ EMV K + P+ ++ N L  GL  + +V 
Sbjct: 548 FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVC 607

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           +AL+L  +M   G+A D  TY + I+GLCK G I EA  LF  L+    + D   YN LI
Sbjct: 608 NALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
              C++G    A+ L         +PN VT+ I++ 
Sbjct: 668 CWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVS 703



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 166/371 (44%), Gaps = 41/371 (11%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGV------------------------------ 273
            Y+ LI  L  A ++    +L +++ ++G+                              
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 274 ------QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
                 +P+  ++NV++D L        A+ +   M+ +GV P   T+  +M   C++ +
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A  L   M   GC  + V Y  LI+   K   V EAL L  EM   G  P V T+N 
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  GL  ++++    KL D M   G   +  TY   ++GLC+ G + EA  L   L  + 
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL---LNKVP 340

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWE-LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              D+  +  LI+G  KSGRL  A   L+  +      P+V T+N +I GLC  G M  A
Sbjct: 341 TPNDVH-FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSA 399

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            D+  DM  N   P++IT+  L+ GF + N+  +   +L++M  K    +    ++++  
Sbjct: 400 VDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRA 459

Query: 567 LVKNEISLKSL 577
           L KN    K+L
Sbjct: 460 LCKNGKVPKAL 470


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 162/505 (32%), Positives = 256/505 (50%), Gaps = 12/505 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           +R   + P   S N LL  L+K+      + +   +   G+ P+++TYN++I+  CK G 
Sbjct: 186 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +      F ++     +P+  T+NSLI G      + E A+LF ++K  GC P++ITYN 
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LIN  C+      A   F EM N NG      KPN VTYST+ID  CKEG +  A  L  
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVVTYSTLIDAFCKEGMMQGAIKLLX 359

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M+   + P+  TY SLI   C A +  EA +L  +M+  GV+ ++VT+  ++D LCK  
Sbjct: 360 DMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 419

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +M EA  +   M++ G+ PN   Y  L+ G+    ++  A ++   M     K D + Y 
Sbjct: 420 RMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYG 479

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I G+C  +++EE   +  EM S+GI    V   T+    F+  +   AL  F EMQ  
Sbjct: 480 SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDV 539

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV A   TY   IDGLC+ G +  AV+ F  +  L  + ++  Y  LIDGLC +  ++ A
Sbjct: 540 GVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESA 599

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +LF  +    + P++  +  +I G    G + +A  L   M E A   D+  +  L+ G
Sbjct: 600 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 659

Query: 532 FIRINEPSKVNELLHKMKEKKVMPD 556
           F +  E  +  +  ++M EK ++P+
Sbjct: 660 FSQCGELHQARKFFNEMIEKGILPE 684



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 248/480 (51%), Gaps = 6/480 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +R+      P   + N L++   K G   L    F  ++ +   P+  T+N +I  L  E
Sbjct: 184 SRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKE 243

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
             +  +  LF +++  G  P+V+TYN+LI+G  + G      +LF EM +      V C 
Sbjct: 244 GDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD------VGCV 297

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ +TY+ +I+  CK   + +A   F +MK+  + P+VVTY++LI   C       A +L
Sbjct: 298 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 357

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M   G+ P+  T+  ++D  CK   + EA +LL+ M+Q GV+ N  TY  L+DG C 
Sbjct: 358 LXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 417

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G++  AEE+F SM   G   +   Y  L++GY K + +E+A+ + ++M    IKP ++ 
Sbjct: 418 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 477

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y ++  G     ++E    + +EM+  G++A+    TT ID   K G   +A+  F+ ++
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +  E  I  Y  LIDGLC++G ++ A + FC +    L PNV  Y  +I GLC +  ++
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIE 597

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+ LF +M+     PD+  F  LI G ++     +   L+ +M E  +  D  + + +V
Sbjct: 598 SAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 657



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 243/489 (49%), Gaps = 16/489 (3%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL-----LASLAKNKHYDTRLN 88
           D   +EGD+       +  +F  M  M  SP  V+  +++     + SL +       + 
Sbjct: 238 DYLCKEGDLE-----NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 292

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G  P++ TYN LINC+CK  ++   F  F  +  +   PN  T+++LI     E  + 
Sbjct: 293 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 352

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  L   ++  G  PN  TY +LI+  C+ G+   A  L  +M       GV  K N V
Sbjct: 353 GAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIV 406

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ ++DGLCK G + +A+ +F  M  + I+P+   Y +L+HG   A    +A ++  +M
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +  ++P ++ +  I+   C  RK++E   +L+ M  RG+  N     T++D +   GK 
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A   F  M+ +G +   V+Y +LI+G C+   VE A+  +  M+S G++P V  Y +L
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL   + +E A KLFDEMQ  G+  D   +T  IDG  K+G + EA+ L   +  L  
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 646

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           E D+  Y  L+ G  + G L  A + F  +    ++P  V    +++     GQ+D+A +
Sbjct: 647 EFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIE 706

Query: 509 LFLDMEENA 517
           L  +ME  A
Sbjct: 707 LKNEMERMA 715



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 222/468 (47%), Gaps = 6/468 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +++L + F ++G +      F R+      P A + N L+  L            F  +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+V TYN +I+ LC+ G    +  LF +M     E+G+   P+ VTY+++IDG 
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR----EMGL--SPDVVTYNSLIDGY 275

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            K G +++  +LF +MKD    PD++TYN LI+  C       A   F EM + G++P+V
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT++ ++D  CK   M  A +LL  M + G+ PN  TY +L+D  C  G +  A +L   
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G K + V+Y  L++G CK   + EA  ++R M+  GI P    Y  L  G  +  +
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A+K+  +M    +  D   Y + I G C    + E   +   ++      +      
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +ID   K+G+   A   F  +    +   +VTY ++I GLC  G ++ A D F  M    
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             P+V  +  LI G    N      +L  +M+ + + PD +  + ++D
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALID 623



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 202/385 (52%), Gaps = 2/385 (0%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +C   +  +  +     + G +++A   F +M++    P   + N L+H L  + +    
Sbjct: 155 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 214

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           ++ F +M+  G+ PSV T+NV++D LCK   ++ + RL   M + G+ P+  TYN+L+DG
Sbjct: 215 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 274

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G +     LF  M+ +GC  D ++YN LIN YCK +++  A   + EM + G+KP 
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTY+TL     +   ++ A+KL  +M+R G+  +  TYT+ ID  CK G + EA +L  
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     +L+I  Y  L+DGLCK+GR+  A E+F S+    + PN   Y  ++ G     
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           +M+ A  +   M E    PD+I +  +I G     +  +   +L +MK + +  +  I +
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQ 586
            ++D   K   S  +L  F  QE Q
Sbjct: 515 TIIDAYFKAGKSSDALNFF--QEMQ 537


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 167/516 (32%), Positives = 267/516 (51%), Gaps = 48/516 (9%)

Query: 17  PISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAS 76
           P ++   +FS    H         +++ I  ++AF +F  ML+  P P  V  F  +L  
Sbjct: 30  PETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTV 88

Query: 77  LAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
           +AK   +D       ++   G+  +LY++ ILI+CFC+  R+SL     G++++      
Sbjct: 89  IAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK------ 142

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
                                         G  P+++T  +L+NG C+      A++L +
Sbjct: 143 -----------------------------LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
            M +G G +     PN V Y+T+I+GLCK   ++ A  +F  M+ + I  D VTYN+LI 
Sbjct: 174 SM-DGFGFV-----PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           GL ++  W +A RL  +M+ + + P+V+ F  ++D   K   + EA  L   M++R V P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  TYN+L++GFC+ G +  A+ +F  M S GC  D V+YN LI G+CK+K VE+ + L+
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EM  +G+     TYNTL  G  +  ++  A K+F+ M   GV+ D  TY   +D LC N
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I +A+ +   L+  + ++DI  YN +I GLC++ +LK AW LF SL    + P+ + Y
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
             MI GLC  G   +A  L   M+E+   P    +D
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 229/447 (51%), Gaps = 10/447 (2%)

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            F  F  +L+S   P+   F  ++  +   ++      L+ K++  G   ++ ++  LI+
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
             CR     +AL L  +M     ++G   +P+ VT  ++++G C+     +A +L   M 
Sbjct: 123 CFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                P+VV YN++I+GLC   D N A  +F  M  +G++   VT+N ++  L  + +  
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           +A+RLL  MV+R + PN   +  L+D F   G +  A  L+  M       +  +YN LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           NG+C +  + +A  ++  MVSKG  P VVTYNTL  G  +  +VE  +KLF EM   G+ 
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAW 472
            D  TY T I G C+ G +  A ++F   R++ C +  DI  YN L+D LC +G+++ A 
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            +   L    +  +++TYNI+IQGLC   ++ +A  LF  +      PD I +  +I G 
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASI 559
            R     + ++L  +MKE   MP   I
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERI 501



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 174/347 (50%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A +LF +M      P +V +  ++  +   N ++    L+ +M + G+   + +F ++
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C+  ++  A  LL  M++ G RP+  T  +L++GFC   +   A  L  SM+  G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + V YN +ING CKN+++  AL ++  M  KGI+   VTYNTL  GL    +   A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  +M +  +  +   +T  ID   K G ++EA  L++ +       ++  YN LI+G C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G L  A  +F  +      P+VVTYN +I G C   +++    LF +M       D  
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           T++ LIHG+ +  + +   ++ ++M +  V PD    +I++D L  N
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 153/313 (48%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y   +    H   +++A  LF EM+     PS+V F  ++  + K  K D    L   M 
Sbjct: 47  YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             G+  +  ++  L+  FC   +++ A  L G M  +G +   V+   L+NG+C+    +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+SL   M   G  P VV YNT+  GL +   + +AL++F  M++ G+ AD  TY T I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GL  +G   +A  L R +   K + ++  +  LID   K G L  A  L+  +    +V
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PNV TYN +I G C  G +  A+ +F  M      PDV+T++ LI GF +        +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346

Query: 545 LHKMKEKKVMPDA 557
             +M  + ++ DA
Sbjct: 347 FCEMTYQGLVGDA 359


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/513 (30%), Positives = 256/513 (49%), Gaps = 16/513 (3%)

Query: 46  TPNEAFCIFDYM--LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLY 97
           +P  +  +F  +  LR+HP+     +FN+L+       +LA      + +   GL P++ 
Sbjct: 190 SPQASLDVFRSLIALRLHPN---HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVV 246

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TYN L+   C+ G +        R+ +    P  AT+N+L+        I +A  +   +
Sbjct: 247 TYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAM 306

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
            AFG EP++ TYN L  GLC+ G    A  L +EM     E   +  P+ VTY+T++D  
Sbjct: 307 TAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM-----EHLSIVSPDVVTYNTLVDAC 361

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            K      A  L  +M+D+ +   +VT+N ++ GLC      EA      M ++G+ P V
Sbjct: 362 FKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDV 421

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +T+N ++D  CK R + +A  L+D MV+ G++ +  T NTL+   C   +   AEEL  S
Sbjct: 422 ITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRS 481

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
               G   D+VSY  ++  Y K  + E AL L+ EM  + + P++ TYNTL  GL  I +
Sbjct: 482 PPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGK 541

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +  A+   +E+ + G+  D  TY   I   CK G + +A +    +     + D+   N 
Sbjct: 542 LTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNT 601

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L++GLC  G+L+ A +LF S        +V+TYN +IQ LC DG +D A   F DME   
Sbjct: 602 LMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARG 661

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             PD  T+++++          +   +LHK+ E
Sbjct: 662 LQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 161/512 (31%), Positives = 254/512 (49%), Gaps = 15/512 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTR--------LNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P + + N +L++LA++     +        L A  L PN YT+N+L++  C  G ++   
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                +     +P+  T+N+L+K    +  + EA  L  ++K  G  P   TYNTL++  
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            R G    A N+ E M     E      P+  TY+ +  GLC+ G VD+A  L  +M+  
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFE------PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHL 344

Query: 237 NI-NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           +I +PDVVTYN+L+         ++A  L  EM D+GV+ S+VT N+++  LC+  +++E
Sbjct: 345 SIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEE 404

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A   L +M + G+ P+  TYNTL+D +C    + +A  L   M   G K D  + N L+ 
Sbjct: 405 ALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLY 464

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             CK K  EEA  L R    +G  P  V+Y T+    F+ ++ E AL L+DEM +  +  
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
              TY T I GLC  G + EA++    L       D   YN +I   CK G L+ A++  
Sbjct: 525 SIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFH 584

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +      P+VVT N ++ GLC  G+++KA  LF    E     DVIT++ LI    + 
Sbjct: 585 NKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKD 644

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +          M+ + + PDA   ++V+  L
Sbjct: 645 GDVDTALHFFADMEARGLQPDAFTYNVVLSAL 676



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 222/522 (42%), Gaps = 82/522 (15%)

Query: 18  ISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL 77
           I+  R+ +++L+  +  L   +   NV+   EA   F +        P + ++N+L A L
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVV---EAMTAFGF-------EPDLWTYNVLAAGL 325

Query: 78  AKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
            +        K  D   + + + P++ TYN L++   K  R S        +       +
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
             T N ++KGL  E ++ EA      +   G  P+VITYNTLI+  C+  +   A  L +
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMD 445

Query: 191 EMANGNGEIGV---------VCK--------------------PNTVTYSTIIDGLCKEG 221
           EM     ++           +CK                    P+ V+Y T++    KE 
Sbjct: 446 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKEN 505

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             + A  L+ +M    + P + TYN+LI GLC      EA     E+M +G+ P   T+N
Sbjct: 506 KPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYN 565

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +I+   CK   +++A +  + M++   +P+  T NTLM+G CL GK+ +A +LF S    
Sbjct: 566 IIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEK 625

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G K D ++YN LI   CK+ +V+ AL  + +M ++G++P   TYN +   L E  + E A
Sbjct: 626 GKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685

Query: 402 LKLFDEMQRDGV------------------------------------AADTRTYTTFID 425
             +  ++   G                                       D  +Y   + 
Sbjct: 686 QNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVK 745

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
            LC  G + EA  +   +      +D   Y  L++GL K  +
Sbjct: 746 ELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/522 (31%), Positives = 268/522 (51%), Gaps = 21/522 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
           M  ++   P   S+N++L  L        A N  YD  + +  + P L+T+ +++   C 
Sbjct: 166 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD--MLSRKIPPTLFTFGVVMKALCA 223

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           +  V         + +    PN+  + +LI  L   +R+ EA  L  ++   GC P+  T
Sbjct: 224 VNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 283

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           +N +I GLC+       +N   +M N     G    P+ +TY  +++GLCK G VD AK 
Sbjct: 284 FNDVILGLCKFDR----INEAAKMVNRMLIRGFT--PDDITYGYLMNGLCKIGRVDAAKD 337

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDEL 287
           LF ++      P  V +N+LIHG       ++AK +  +M+   G+ P V T+N ++   
Sbjct: 338 LFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 393

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K   +  A  +L  M  +G +PN  +Y  L+DGFC +GKI+ A  L   M + G K + 
Sbjct: 394 WKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNT 453

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V +N LI+ +CK   + EA+ ++REM  KG KP V T+N+L  GL E+ +++HAL L  +
Sbjct: 454 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 513

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M  +GV A+T TY T I+   + G I EA +L   +      LD   YN LI GLC++G 
Sbjct: 514 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGE 573

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A  LF  +    LVP+ ++ NI+I GLC  G +++A +   +M    + PD++TF+ 
Sbjct: 574 VDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 633

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           LI+G  R         +  K++ + + PD    + ++  L K
Sbjct: 634 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/512 (31%), Positives = 252/512 (49%), Gaps = 52/512 (10%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP + +F +++ +L      D+ L+        G  PN   Y  LI+   K  RV+    
Sbjct: 208 PPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 267

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +      P+A TFN +I GL    RI EAA +  ++   G  P+ ITY  L+NGLC
Sbjct: 268 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLC 327

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDE 236
           + G    A +LF  +           KP +V ++T+I G    G +D AKA+   M    
Sbjct: 328 KIGRVDAAKDLFYRIP----------KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I PDV TYNSLI+G         A  +  +M ++G +P+V ++ +++D  CK  K+DEA
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             LL+ M   G++PN   +N L+  FC   +I  A E+F  M   GCK D  ++N LI+G
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTL---FL----------------------- 390
            C+  E++ AL L R+M+S+G+    VTYNTL   FL                       
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557

Query: 391 ---------GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
                    GL    +V+ A  LF++M RDG+   + +    I+GLC++G + EAVE  +
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            + +     DI  +N LI+GLC++GR++    +F  L    + P+ VTYN ++  LC  G
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            +  A  L  +  E+   P+  T+ +L+   +
Sbjct: 678 FVYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/452 (31%), Positives = 226/452 (50%), Gaps = 14/452 (3%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R + SC  P   ++N +++ L + +    AA +F  + +    P + T+  ++  LC   
Sbjct: 167 RNVYSC-EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVN 225

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               AL++  +M          C PN+V Y T+I  L K   V++A  L  +M      P
Sbjct: 226 EVDSALSVLRDMTKHG------CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 279

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D  T+N +I GLC  +  NEA ++   M+ +G  P  +T+  +M+ LCK  ++D A  L 
Sbjct: 280 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCK 359
                R  +P +  +NTL+ GF   G+++ A+ +   M  S G   D  +YN LI GY K
Sbjct: 340 ----YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 395

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              V  AL + R+M +KG KP V +Y  L  G  ++ +++ A  L +EM  DG+  +T  
Sbjct: 396 KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG 455

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA-WELFCSL 478
           +   I   CK   I EAVE+FR +    C+ D+  +N LI GLC+   +K A W L   +
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
             GV V N VTYN +I      G++ +AR L  +M    +  D IT++ LI G  R  E 
Sbjct: 516 SEGV-VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEV 574

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            K   L  KM    ++P +   +I+++ L ++
Sbjct: 575 DKARSLFEKMLRDGLVPSSISCNILINGLCRS 606



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 173/381 (45%), Gaps = 8/381 (2%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y  +I  L   G       L +QMKDE I      + S++     A    +  RL +EM 
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 167

Query: 270 D-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +    +P+  ++NV+++ L        A+ +   M+ R + P   T+  +M   C + ++
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  +   M   GC  + V Y  LI+   K   V EAL L  EM   G  P   T+N +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 287

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
            LGL +  ++  A K+ + M   G   D  TY   ++GLCK G +  A +LF   RI K 
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF--YRIPKP 345

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSL--PHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              I  +N LI G    GRL  A  +   +   +G+ VP+V TYN +I G    G +  A
Sbjct: 346 TSVI--FNTLIHGFVTHGRLDDAKAVLSDMVTSYGI-VPDVCTYNSLIYGYWKKGLVGLA 402

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            ++  DM      P+V ++ +L+ GF ++ +  +   LL++M    + P+    + ++  
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462

Query: 567 LVKNEISLKSLPSFLVQERQG 587
             K     +++  F    R+G
Sbjct: 463 FCKEHRIPEAVEIFREMPRKG 483



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 155/353 (43%), Gaps = 70/353 (19%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           ++A  +   M+  +   P V ++N L+    K       L         G  PN+Y+Y I
Sbjct: 364 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTI 423

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ FCK+G++   +     +      PN   FN LI     E RI EA  +F ++   G
Sbjct: 424 LVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM------ANG------------NGEIGVVC 203
           C+P+V T+N+LI+GLC       AL L  +M      AN              GEI    
Sbjct: 484 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 543

Query: 204 KP-----------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI-------------- 238
           K            + +TY+++I GLC+ G VDKA++LF +M  + +              
Sbjct: 544 KLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGL 603

Query: 239 ---------------------NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
                                 PD+VT+NSLI+GLC A    +   +F ++  +G+ P  
Sbjct: 604 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 663

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           VT+N +M  LCK   + +A  LLD  ++ G  PN  T++ L+        ++R
Sbjct: 664 VTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/454 (33%), Positives = 239/454 (52%), Gaps = 12/454 (2%)

Query: 62  PSPPPVSSFNILLASL-AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           PSP  V     L+  L A  +  D R       P++  YN ++  +C  G++     A  
Sbjct: 99  PSPAAVGPCAALIKKLCASGRTADARRVLAASGPDVMVYNAMVAGYCGAGQLD----AAR 154

Query: 121 RILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           R++      P+A T+N+LI+GL    R   A A+   +   GC P+V+TY  L+   C+ 
Sbjct: 155 RLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKR 214

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A+ L +EM +        C P+ VTY+ +++G+C+EG V+ A      +      
Sbjct: 215 SGYKQAMKLLDEMHDKG------CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCE 268

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+ V+YN ++ GL  A  W +A++L  EM  +G  P+VVTFN+++  LC+   ++ A  +
Sbjct: 269 PNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEV 328

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L+ M Q G  PN+ +YN L+  FC   KI++A E    M S GC  D VSYN L+   C+
Sbjct: 329 LEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCR 388

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N EV+ A+ L  ++  KG  P +++YNT+  GL +  + + AL+L DEM   G+  D  T
Sbjct: 389 NGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIIT 448

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y+T   GLC+   I EAV  F  ++ +        YN ++ GLCK      A +LF  + 
Sbjct: 449 YSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMI 508

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
               +PN  TY I+++GL  +G + +AR+LF  +
Sbjct: 509 SSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 215/433 (49%), Gaps = 14/433 (3%)

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           +LIK L A  R  +A  +   L A G  P+V+ YN ++ G C  G    A  L  +M   
Sbjct: 109 ALIKKLCASGRTADARRV---LAASG--PDVMVYNAMVAGYCGAGQLDAARRLVADMP-- 161

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                   +P+  TY+T+I GLC  G    A A+   M      PDVVTY  L+   C  
Sbjct: 162 -------VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKR 214

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
           + + +A +L  EM D+G  P +VT+NV+++ +C+  ++++A   L  +   G  PN  +Y
Sbjct: 215 SGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSY 274

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N ++ G     +   AE+L   M   GC  + V++N+LI+  C+   VE A+ +  +M  
Sbjct: 275 NIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G  P  ++YN L     +  ++  A++  + M   G   D  +Y T +  LC+NG +  
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+EL   L+   C   + +YN +IDGL K+G+ K A EL   +    L P+++TY+ +  
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           GLC + ++++A   F  +++    P    ++ ++ G  +  E     +L   M     MP
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMP 514

Query: 556 DASIVSIVVDLLV 568
           + S  +I+V+ L 
Sbjct: 515 NESTYTILVEGLA 527



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 199/401 (49%), Gaps = 14/401 (3%)

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            LI  LC +G T  A  +    A+G         P+ + Y+ ++ G C  G +D A+ L 
Sbjct: 109 ALIKKLCASGRTADARRVLA--ASG---------PDVMVYNAMVAGYCGAGQLDAARRLV 157

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             M    + PD  TYN+LI GLC     + A  +  +M  +G  P VVT+ ++++  CK 
Sbjct: 158 ADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKR 214

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
               +A +LLD M  +G  P+  TYN +++G C  G++  A E   ++ S GC+ + VSY
Sbjct: 215 SGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSY 274

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           NI++ G    +  E+A  L  EM  KG  P VVT+N L   L     VE A+++ ++M +
Sbjct: 275 NIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   ++ +Y   +   CK   I +A+E    +    C  DI +YN L+  LC++G +  
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A EL   L      P +++YN +I GL   G+  +A +L  +M      PD+IT+  +  
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           G  R +   +      K+++  + P A++ + ++  L K  
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRR 495



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 190/396 (47%), Gaps = 12/396 (3%)

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L R G    AL L + +A  N        P     + +I  LC  G    A+ +      
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGP----CAALIKKLCASGRTADARRVLAAS-- 130

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
               PDV+ YN+++ G C A   + A+RL  +M    V+P   T+N ++  LC   +   
Sbjct: 131 ---GPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSN 184

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  +L+ M +RG  P+  TY  L++  C      +A +L   M   GC  D V+YN+++N
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G C+   VE+A+   + + S G +P  V+YN +  GLF   + E A KL +EM   G   
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T+   I  LC+ G +  A+E+   +    C  +  +YN L+   CK  ++  A E  
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +      P++V+YN ++  LC +G++D A +L   +++   +P +I+++ +I G  + 
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +  +  ELL +M  K + PD    S +   L + +
Sbjct: 425 GKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 166/503 (33%), Positives = 255/503 (50%), Gaps = 8/503 (1%)

Query: 64  PPPVSSFNILLASLAKNK--HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           PP   + N +L  LA+++      RL      PN++T+NI+I+  CK G ++     F R
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSR 213

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +      P+  TFNSLI G      + E   L  +++  GC+ +V+TYN LIN  C+ G 
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A   F  M       GV+   N VT+ST +D  CKEG V +A  LF QM+   +  +
Sbjct: 274 METAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             TY  LI G C A   ++A  L  EM+ QGV  +VVT+ V++D LCK RK+ EA  +L 
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLR 387

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           +M + GVR N   Y TL+ G  +     +A  L   M++ G + D   Y  LI G C   
Sbjct: 388 MMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVH 447

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +++EA SL  +M   G++P  + Y T+    F+  +V  A+ +  ++   G   +  TY 
Sbjct: 448 KLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYC 507

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDGLCK G I EA+  F  +R L  + ++QAY  L+DGLCK+G L  A +LF  + H 
Sbjct: 508 ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +  + V Y  ++ G    G +  A  L   M ++    D+  +   I GF  +N   + 
Sbjct: 568 GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEA 627

Query: 542 NELLHKMKEKKVMPDASIVSIVV 564
            E+  +M    + PD ++ + ++
Sbjct: 628 REVFSEMIGHGIAPDRAVYNCLI 650



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 217/440 (49%), Gaps = 10/440 (2%)

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
           A+  ++L+  L     + +A     +++     PN  T N ++  L R     +   LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
           ++            PN  T++ +ID LCKEG + +A++LF +MK+    PDVVT+NSLI 
Sbjct: 182 QLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G     + +E ++L  EM   G +  VVT+N +++  CK  +M+ A      M + GV  
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  T++T +D FC  G +  A +LF  M   G   ++ +Y  LI+G CK   +++A+ L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EMV +G+   VVTY  L  GL +  +V  A  +   M++ GV A+   YTT I G   N
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
               +A+ L   ++    ELDI  Y  LI GLC   +L  A  L   +    L PN + Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             M+      G++ +A  +   + ++   P+VIT+  LI G  +     +     +KM++
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 551 KKVMPDASIVSIVVDLLVKN 570
             + P+    + +VD L KN
Sbjct: 532 LGLDPNVQAYTALVDGLCKN 551



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%)

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L R +  +   P V T+N +   L +  ++  A  LF  M+  G   D  T+ + IDG  
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G + E  +L   +R   C+ D+  YN LI+  CK GR++ A+  F ++    ++ NVV
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           T++  +   C +G + +A  LF  M     A +  T+  LI G  +         LL +M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + V  +    +++VD L K     ++     + E+ G
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 257/504 (50%), Gaps = 19/504 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G  P+L TYN++I   C+ G V   F     + +     +  T++ LI G   + R
Sbjct: 262 MEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKR 321

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKP 205
             EA  +  ++ + G +P  + Y  LI+G  R G +  A  + EEM A G        K 
Sbjct: 322 CTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARG-------VKL 374

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  TY+ ++ G+CK G ++KA AL  +M    I PD  TYN++I G     + +  K L 
Sbjct: 375 NLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL 434

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM    + P+  T  +I++ LC++  +++ASR+ ++MV  GV+PNA  Y TL+ G    
Sbjct: 435 SEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQE 494

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+   A  +   M+  G + D + YN +I G CK++++EEA     EM+ +G+KP V TY
Sbjct: 495 GRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G  +  +++ A + F EM   G+A +    T  IDG CK G   EA  +FR +  
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLG 614

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D++ Y+ LI GL ++G+L+ A EL        LVP+V TYN +I G C  G + K
Sbjct: 615 RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGK 674

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  L   M +   +P++IT++ LI+G  +  E  +  EL   +  K +  +A   + ++D
Sbjct: 675 AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734

Query: 566 LLVK-----------NEISLKSLP 578
              K           +E++LK +P
Sbjct: 735 GYCKSGNLSKAFRLFDEMTLKGVP 758



 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 160/497 (32%), Positives = 251/497 (50%), Gaps = 7/497 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ PN   Y  LI    + GR          + +    P+   +NS+I GL    ++ EA
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                ++   G +PNV TY  LI+G C++G   +A   F+EM      +G    PN V  
Sbjct: 536 KDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM------LGCGIAPNDVVC 589

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +IDG CKEG   +A ++F  M   +++PDV TY++LIHGL        A  L  E ++
Sbjct: 590 TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE 649

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P V T+N I+   CK   + +A +L + M Q+G+ PN  TYN L++G C  G+I R
Sbjct: 650 KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIER 709

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ELF  +   G  H+ V+Y  +I+GYCK+  + +A  L+ EM  KG+ P    Y+ L  
Sbjct: 710 ARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALID 769

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +    E AL LF E  + G A+ T +    +DG CK+G +IEA +L   +     + 
Sbjct: 770 GCRKEGNTEKALSLFLESVQKGFAS-TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKP 828

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  LID  CK+G LK A + F  +    L+PN +TY  ++ G    G+  +   LF
Sbjct: 829 DHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALF 888

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +M      PD +T+ ++I   ++  +  K  +L+  M +K      ++  +++D L + 
Sbjct: 889 DEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRK 948

Query: 571 EISLKSLPSFLVQERQG 587
           E   + L      E QG
Sbjct: 949 EHVSEVLKVLEKIEEQG 965



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 259/558 (46%), Gaps = 75/558 (13%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+  NL+TYN L+   CK G +         ++     P+  T+N++I+G   E    
Sbjct: 369 ARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTS 428

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
               L +++K     P   T   +INGLCR G    A  +FE M +    +GV  KPN V
Sbjct: 429 RVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVS----LGV--KPNAV 482

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+T+I G  +EG   +A  +   M  + + PDV+ YNS+I GLC +    EAK   +EM
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM 542

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +++G++P+V T+  ++   CK+ +M  A R    M+  G+ PN      L+DG+C  G  
Sbjct: 543 IERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGST 602

Query: 329 NRAEELF-----------------------------GSMESM------GCKHDDVSYNIL 353
             A  +F                             G+ME +      G   D  +YN +
Sbjct: 603 TEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSI 662

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G+CK   + +A  L+  M  KGI P ++TYN L  GL +  ++E A +LFD +   G+
Sbjct: 663 ISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGL 722

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY------------------ 455
           A +  TY T IDG CK+G + +A  LF  + +     D   Y                  
Sbjct: 723 AHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALS 782

Query: 456 ----------------NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
                           N L+DG CKSG++  A +L   +    + P+ VTY I+I   C 
Sbjct: 783 LFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCK 842

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G + +A   F+DM++    P+ +T+  L+ G+      S++  L  +M  K + PD   
Sbjct: 843 TGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVT 902

Query: 560 VSIVVDLLVKNEISLKSL 577
            S+++D  +K    +K+L
Sbjct: 903 WSVMIDAHLKEGDHVKTL 920



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 211/435 (48%), Gaps = 6/435 (1%)

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
              F  LI G   +    EA + F   K  G    ++  N L++ L +       L LF 
Sbjct: 166 GVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANK----LELFW 221

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
              NG  E  V+   +  TY+ +I+   + G   + K L  +M+++  +P +VTYN +I 
Sbjct: 222 RFYNGMLEANVL--HDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIG 279

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           GLC A + +EA  L   M  +G+   V T+++++D   K ++  EA  +L+ M  +G++P
Sbjct: 280 GLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKP 339

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               Y  L+DGF   G    A  +   M + G K +  +YN L+ G CK  ++E+A +L 
Sbjct: 340 GHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALL 399

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EM+  GIKP   TYN +  G  +         L  EM++  +     T    I+GLC++
Sbjct: 400 NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRH 459

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I +A  +F  +  L  + +   Y  LI G  + GR + A  +   +    + P+V+ Y
Sbjct: 460 GSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCY 519

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +I GLC   +M++A+D  ++M E    P+V T+  LIHG+ +  E    +    +M  
Sbjct: 520 NSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG 579

Query: 551 KKVMPDASIVSIVVD 565
             + P+  + + ++D
Sbjct: 580 CGIAPNDVVCTALID 594



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 228/529 (43%), Gaps = 81/529 (15%)

Query: 65   PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V  +N ++  L K+      K Y   +   GL PN+YTY  LI+ +CK G + +    
Sbjct: 514  PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  +L     PN     +LI G   E    EA ++F  +      P+V TY+ LI+GL R
Sbjct: 574  FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G    A+ L  E      E G+V  P+  TY++II G CK+G + KA  L   M  + I
Sbjct: 634  NGKLQGAMELLSEFL----EKGLV--PDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI 687

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            +P+++TYN+LI+GLC A +   A+ LF  +  +G+  + VT+  I+D  CK+  + +A R
Sbjct: 688  SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR 747

Query: 299  LLDLMVQRGVRPNACTY----------------------------------NTLMDGFCL 324
            L D M  +GV P++  Y                                  N LMDGFC 
Sbjct: 748  LFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCK 807

Query: 325  MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN---KEVE----------------- 364
             GK+  A +L   M     K D V+Y ILI+ +CK    KE E                 
Sbjct: 808  SGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALT 867

Query: 365  ---------------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
                           E  +L+ EM++K I+P  VT++ +     +       LKL D+M 
Sbjct: 868  YTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDML 927

Query: 410  RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
            + G           ID LC+  ++ E +++   +      L +   + L+    K+G++ 
Sbjct: 928  KKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMD 987

Query: 470  FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
             A  +  S+     VP+    N +I    +    + A D    M    A
Sbjct: 988  GAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMAWEVA 1036



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 213/447 (47%), Gaps = 22/447 (4%)

Query: 46   TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTY 99
            +  EA  IF  ML      P V +++ L+  L +N      +         GL P+++TY
Sbjct: 601  STTEATSIFRCMLG-RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTY 659

Query: 100  NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            N +I+ FCK G +   F     + +   +PN  T+N+LI GL     I  A  LF  +  
Sbjct: 660  NSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPG 719

Query: 160  FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
             G   N +TY T+I+G C++G+   A  LF+EM       GV   P++  YS +IDG  K
Sbjct: 720  KGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLK----GV--PPDSFVYSALIDGCRK 773

Query: 220  EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            EG  +KA +LFL+   +       + N+L+ G C +    EA +L  +M+D+ V+P  VT
Sbjct: 774  EGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVT 832

Query: 280  FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
            + +++D  CK   + EA +    M +R + PNA TY  L+ G+ + G+ +    LF  M 
Sbjct: 833  YTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMI 892

Query: 340  SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            +   + D V+++++I+ + K  +  + L L  +M+ KG   +    + L   L     V 
Sbjct: 893  AKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVS 952

Query: 400  HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
              LK+ ++++  G+     T +T +    K G +  A  + +++   K   D    N LI
Sbjct: 953  EVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012

Query: 460  -------DGLCKSGRLK-FAWELFCSL 478
                   D       LK  AWE+ C +
Sbjct: 1013 NVEQDSTDSENAGDFLKQMAWEVACQV 1039



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 1/376 (0%)

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           V +  +IDG  K+G  D+A + FL  K       ++  N L+  L  AN      R +  
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++  V   V T+  +++   +     E  RLL  M ++G  P+  TYN ++ G C  G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A EL   M+  G   D  +Y+ILI+G+ K K   EA  +  EM SKG+KP  V Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G         A ++ +EM   GV  +  TY   + G+CK G + +A  L   + ++ 
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            + D Q YN +I+G  K        +L   +    LVP   T  ++I GLC  G ++ A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +F  M      P+ + +  LI G ++     +   +L  M +K V PD    + V+  L
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 568 VKNEISLKSLPSFLVQ 583
            K+   ++    +LV+
Sbjct: 527 CKSR-KMEEAKDYLVE 541


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 166/503 (33%), Positives = 255/503 (50%), Gaps = 8/503 (1%)

Query: 64  PPPVSSFNILLASLAKNK--HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           PP   + N +L  LA+++      RL      PN++T+NI+I+  CK G ++     F R
Sbjct: 154 PPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSR 213

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +      P+  TFNSLI G      + E   L  +++  GC+ +V+TYN LIN  C+ G 
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A   F  M       GV+   N VT+ST +D  CKEG V +A  LF QM+   +  +
Sbjct: 274 METAYGYFAAMKRE----GVM--ANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             TY  LI G C A   ++A  L  EM+ QGV  +VVT+ V++D LCK RK+ EA  +L 
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLR 387

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           +M + GVR N   Y TL+ G  +     +A  L   M++ G + D   Y  LI G C   
Sbjct: 388 MMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVH 447

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +++EA SL  +M   G++P  + Y T+    F+  +V  A+ +  ++   G   +  TY 
Sbjct: 448 KLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYC 507

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDGLCK G I EA+  F  +R L  + ++QAY  L+DGLCK+G L  A +LF  + H 
Sbjct: 508 ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +  + V Y  ++ G    G +  A  L   M ++    D+  +   I GF  +N   + 
Sbjct: 568 GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEA 627

Query: 542 NELLHKMKEKKVMPDASIVSIVV 564
            E+  +M    + PD ++ + ++
Sbjct: 628 REVFSEMIGHGIAPDRAVYNCLI 650



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 217/440 (49%), Gaps = 10/440 (2%)

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
           A+  ++L+  L     + +A     +++     PN  T N ++  L R     +   LFE
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFE 181

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
           ++            PN  T++ +ID LCKEG + +A++LF +MK+    PDVVT+NSLI 
Sbjct: 182 QLP----------APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G     + +E ++L  EM   G +  VVT+N +++  CK  +M+ A      M + GV  
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  T++T +D FC  G +  A +LF  M   G   ++ +Y  LI+G CK   +++A+ L 
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EMV +G+   VVTY  L  GL +  +V  A  +   M++ GV A+   YTT I G   N
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
               +A+ L   ++    ELDI  Y  LI GLC   +L  A  L   +    L PN + Y
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             M+      G++ +A  +   + ++   P+VIT+  LI G  +     +     +KM++
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 551 KKVMPDASIVSIVVDLLVKN 570
             + P+    + +VD L KN
Sbjct: 532 LGLDPNVQAYTALVDGLCKN 551



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%)

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L R +  +   P V T+N +   L +  ++  A  LF  M+  G   D  T+ + IDG  
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G + E  +L   +R   C+ D+  YN LI+  CK GR++ A+  F ++    ++ NVV
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           T++  +   C +G + +A  LF  M     A +  T+  LI G  +         LL +M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + V  +    +++VD L K     ++     + E+ G
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 169/592 (28%), Positives = 276/592 (46%), Gaps = 84/592 (14%)

Query: 36  TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK--------HYDTRL 87
           T + G      P +A  +FD +L+       +   N  L+ +A+          +   R 
Sbjct: 32  TKQGGRQRATEPGDAHQVFDRLLK-RGDRASIFDLNRALSDVARASPAVAISLFNRMPRA 90

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
            AT   PN+ TY I+I C  ++GR+ L F   GR++ +    +   F+ L+KGL    R 
Sbjct: 91  GATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRT 150

Query: 148 MEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            +A  +   ++   GC+P++ +Y  L+ GLC    +  AL+L   MA+  G     C  +
Sbjct: 151 SDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR----CPLD 206

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN-------------------- 246
            V Y+T+I+GL +EG +DKA +LF  M D   +PDVVTY+                    
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 266

Query: 247 ---------------SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
                          SL+HG C +    EA  +F +M   GV+P VVT+  +MD LCKN 
Sbjct: 267 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 326

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K  EA ++ D +V+RG +P++ TY TL+ G+   G +    +L   M   G +     +N
Sbjct: 327 KSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 386

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           +++  Y K+ +V+EAL ++  M  +G+ P +V Y T+   L    +V+ AL  F+ ++ +
Sbjct: 387 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 446

Query: 412 GVAADTRTYTTFIDG-----------------------------------LCKNGYIIEA 436
           G+A +   +TT I G                                   LCK G +IEA
Sbjct: 447 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 506

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
             LF  +  +  E +   YN LIDG C  G++  A +L   +    + P+ VTYN +I G
Sbjct: 507 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIING 566

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
              +G+++    L  +M+     P ++T++ML+ G  +        EL  +M
Sbjct: 567 YSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 223/475 (46%), Gaps = 19/475 (4%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA--LFTKLKAFGC---EPNVITYNTLI 173
           F R+L+     + A+   L + L   +R   A A  LF ++   G     PN+ TY  +I
Sbjct: 50  FDRLLKR---GDRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVI 106

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ- 232
               R G   +A      +       G+   P  + +S ++ GLC       A  + L+ 
Sbjct: 107 GCCRRLGRLDLAFATVGRVIT----TGLRMSP--ILFSPLLKGLCDRRRTSDAMDIVLRR 160

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQP-SVVTFNVIMDELCKN 290
           M +    PD+ +Y  L+ GLC      +A  L   M D +G  P  VV +  +++ L + 
Sbjct: 161 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 220

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            ++D+A  L D M+ RG  P+  TY++++        +++A ++F  M   G   D + Y
Sbjct: 221 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 280

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             L++GYC + + +EA+ ++++M   G++P VVTY  L   L +  +   A K+FD + +
Sbjct: 281 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 340

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D+ TY T + G    G ++E  +L   +     +L    +N ++    K  ++  
Sbjct: 341 RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDE 400

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  +F ++    L P++V Y  ++  LC  G++D A   F  ++    AP+++ F  LIH
Sbjct: 401 ALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIH 460

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE--ISLKSLPSFLVQ 583
           G    ++  KV EL  +M ++ +  D    + ++  L K    I  K+L   +V+
Sbjct: 461 GLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 515



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 76/407 (18%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           REG ++     +A+ +FD ML   PSP  V +++ ++++L+K +  D      TR+   G
Sbjct: 219 REGQLD-----KAYSLFDAMLDRGPSPD-VVTYSSIISALSKTQAMDKATQVFTRMVKNG 272

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P+   Y  L++ +C  G+       F ++ R    P+  T+ +L+  L    +  EA 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTG-----HTMIALNLFEEMANG----NGEIGVV 202
            +F  L   G +P+  TY TL++G    G     H ++ L + + M  G    N  +G  
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392

Query: 203 CK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            K                    P+ V Y T++D LC  G VD A + F  +K E + P++
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGV----------------------------- 273
           V + +LIHGLC  + W++ + L  EM+D+G+                             
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 274 ------QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
                 +P+  T+N ++D  C + KMDEA +LL +MV  GV+P+  TYNT+++G+   G+
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 572

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           I     L   M+  G     V+Y +L+ G  +      A  LY  M+
Sbjct: 573 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 157/317 (49%), Gaps = 5/317 (1%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P++ T+ +++    +  ++D A   +  ++  G+R +   ++ L+ G C   + + A ++
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 335 -FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKP-TVVTYNTLFLG 391
               M  +GCK D  SY IL+ G C +K  ++AL L   M   KG  P  VV Y T+  G
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    Q++ A  LFD M   G + D  TY++ I  L K   + +A ++F  +       D
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
              Y  L+ G C SG+ K A  +F  +  HGV  P+VVTY  ++  LC +G+  +AR +F
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV-EPDVVTYTALMDYLCKNGKSTEARKIF 335

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             + +    PD  T+  L+HG+       ++++LL  M +K +     I ++++    K+
Sbjct: 336 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 395

Query: 571 EISLKSLPSFLVQERQG 587
               ++L  F    +QG
Sbjct: 396 NKVDEALLVFSNMRQQG 412



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 42/350 (12%)

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR- 309
           G   A +  +A ++F  ++ +G + S+   N  + ++ +       S L + M + G   
Sbjct: 36  GRQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAIS-LFNRMPRAGATS 94

Query: 310 --PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             PN  TY  ++     +G+++ A    G + + G +   + ++ L+ G C  +   +A+
Sbjct: 95  AAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAM 154

Query: 368 SL-YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            +  R M   G KP                                   D  +YT  + G
Sbjct: 155 DIVLRRMPELGCKP-----------------------------------DLFSYTILLKG 179

Query: 427 LCKNGYIIEAVELFRTLRILK--CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           LC +    +A++L   +   K  C LD+ AY  +I+GL + G+L  A+ LF ++      
Sbjct: 180 LCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS 239

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+VVTY+ +I  L     MDKA  +F  M +N   PD I +  L+HG+    +P +   +
Sbjct: 240 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 299

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
             KM    V PD    + ++D L KN  S ++   F    ++G   +S  
Sbjct: 300 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTT 349



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 12/242 (4%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           FN+++ + AK+   D      + +   GL P++  Y  +++  C  GRV      F  + 
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                PN   F +LI GL    +  +   L  ++   G   + I +N ++  LC+ G  +
Sbjct: 445 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 504

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A NLF+ M      IG+  +PNT TY+T+IDG C +G +D+A  L   M    + P  V
Sbjct: 505 EAKNLFDLMV----RIGI--EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 558

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYN++I+G        +   L  EM  +GV P +VT+ +++  L +  +   A  L   M
Sbjct: 559 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 618

Query: 304 VQ 305
           ++
Sbjct: 619 IK 620


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 173/565 (30%), Positives = 284/565 (50%), Gaps = 39/565 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKH----YD--TRLNATGLFPNLYTYNILINCF 106
           +FD++ R       V ++N  L +LAK       Y+   ++   G  P+ +TY+I++   
Sbjct: 24  LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-CEPN 165
           CK G +       G++  S    N  T++ +I G    SR+ +A  +F  + + G C P+
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPD 143

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V+T+N+L+ GLC       A  LFE MA         C+PN ++YST++DGLCK G +D+
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKAGRLDE 197

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF----- 280
           A  L+ +M +++  PD+V Y S + GLC AN   EA     +M+ +G +   V F     
Sbjct: 198 ACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 281 ------------NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                       N +++ LC++  +DEA +  + M+ R   P+A  +NTL+   C   ++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 329 NRAEELFGSMESMG---CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
                LF  M+SM    C  +  +YNI+++  CK K+++EA  L  EM + G+ P VVTY
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           + L  GL ++ +++ A  L +EM ++GV  D+ T  + ++ L K G +  A+    T++ 
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D+  YN L+DGLCK+GR+  A      +      P+V +Y I+I  LC  GQ   
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAG 497

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +F +M +    PD + +  L+ G  R        ELL   K     PD  +  +V+D
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVLD 554

Query: 566 LLVKNEISLKSLPSFLVQERQGEVG 590
            L K   + K+  +  V ER  + G
Sbjct: 555 GLCK---AGKAEDACEVVERMADAG 576



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/569 (29%), Positives = 263/569 (46%), Gaps = 97/569 (17%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A+  F  M R    PP   +++I+L  L K    D       +L  +G+  N+ TY+++I
Sbjct: 57  AYEKFQQMQR-RGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVI 115

Query: 104 NCFCKIGRVSLGFIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +  CK  RV      F  +     C  P+  TFNSL+KGL +  R+ EA  LF  +   G
Sbjct: 116 DGCCKASRVDDALEIFKTMSSGGGC-VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------------ANGNGEIG 200
           CEPNVI+Y+TL++GLC+ G    A  L+EEM                     AN   E  
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 201 VVC--------KPNTVTYSTII-----------------DGLCKEGFVDKAKALFLQMKD 235
             C        K + V +ST+I                 + LC+ G +D+A   F +M  
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG---VQPSVVTFNVIMDELCKNRK 292
            N  P    +N+LIH +C +    +   LF  M         P++ T+N+++D LCK ++
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG---------------- 336
           +DEA  L++ M   G+ P+  TY+ L+DG C +GK++RA +L                  
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 337 -------------------SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
                              +M++ G   D V+YN L++G CK   ++EA++   +MV+  
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P V +Y  +   L    Q   A  +F EM + GV  DT  Y + +DGL +NG    A+
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           EL +T     C+ D   +  ++DGLCK+G+ + A E+   +       +  TY  ++ GL
Sbjct: 535 ELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGL 591

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFD 526
              G++DKAR L  D  E   + + ++ +
Sbjct: 592 RKLGKVDKARQLVDDASETHTSVERLSME 620


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 252/485 (51%), Gaps = 16/485 (3%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRI 147
            +G   +++ YN L+  +C+ GR+     A  R++ S    P+A T+  LI+GL    R+
Sbjct: 98  GSGAPVDVFAYNTLVAGYCRYGRLD----AARRLIASMPVPPDAYTYTPLIRGLCDRGRV 153

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPN 206
            +A +L   +    C+P+V+TY  L+  +C++     A+ + +EM A G       C PN
Sbjct: 154 GDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG-------CTPN 206

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ II+G+C+E  VD A+ +  ++      PD V+Y +++ GLC A  W + + LF 
Sbjct: 207 IVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFC 266

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM++    P+ VTF++++   C+   ++ A  +LD M + G   N    N +++  C  G
Sbjct: 267 EMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A E   +M S GC  D +SY  ++ G C+    E+A  L  EMV K   P  VT+N
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T    L +   ++ A+ L ++M   G +    TY   ++G C  G +  A+ELF +L   
Sbjct: 387 TFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL--- 443

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            CE +   Y  L+ GLC + RL  A EL   +       NVVT+N+++   C  G +++A
Sbjct: 444 PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEA 503

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +L   M E+   P++ITF+ L+ G        +  ELLH +  K +  D    S +VD+
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDV 563

Query: 567 LVKNE 571
           L + +
Sbjct: 564 LSRED 568



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 257/517 (49%), Gaps = 16/517 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  + D MLR     P V ++ +LL ++ K+  +         + A G  PN+ TYN++
Sbjct: 155 DALSLLDDMLR-RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVI 213

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C+  RV        R+    F P+  ++ +++KGL A  R  +   LF ++    C
Sbjct: 214 INGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNC 273

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T++ L+   CR G    A+ + + M+         C  NT   + +I+ +CK+G 
Sbjct: 274 VPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHG------CTANTTLCNIVINSICKQGR 327

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A      M     +PD ++Y +++ GLC A  W +AK L  EM+ +   P+ VTFN 
Sbjct: 328 VDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNT 387

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  LC+   +D+A  L++ M + G      TYN L++GFC+ G+++ A ELF S+    
Sbjct: 388 FICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP--- 444

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C+ + ++Y  L+ G C  + ++ A  L  EM+       VVT+N L     +   VE A+
Sbjct: 445 CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAI 504

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M   G   +  T+ T +DG+ ++    EA+EL   L      LD   Y+ ++D L
Sbjct: 505 ELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVL 564

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            +  R++ A ++F ++    + P  V YN ++  LC   + D+A D F  M  N+  P+ 
Sbjct: 565 SREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNE 624

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            T+ +LI G  R     +   +L ++  + V+  + I
Sbjct: 625 STYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLI 661



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 252/514 (49%), Gaps = 23/514 (4%)

Query: 64  PPPVSS-FNILLA--SLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           P P SS    L+A   LA+      R  + G  P++Y    LI   C+ GR S       
Sbjct: 35  PSPASSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDA----A 90

Query: 121 RILRSCFTPNAA----TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           R+LR+     A      +N+L+ G     R+  A  L   +      P+  TY  LI GL
Sbjct: 91  RVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGL 147

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C  G    AL+L ++M          C+P+ VTY+ +++ +CK     +A  +  +M+ +
Sbjct: 148 CDRGRVGDALSLLDDMLRRE------CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAK 201

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              P++VTYN +I+G+C  +  ++A+++   +   G QP  V++  ++  LC  ++ ++ 
Sbjct: 202 GCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 261

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   MV+    PN  T++ L+  FC  G + RA E+   M   GC  +    NI+IN 
Sbjct: 262 EVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINS 321

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK   V++A      M S G  P  ++Y T+  GL    + E A +L +EM R     +
Sbjct: 322 ICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPN 381

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T+ TFI  LC+ G I +A+ L   +    C + I  YN L++G C  GR+  A ELF 
Sbjct: 382 EVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFN 441

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           SLP     PN +TY  ++ GLC+  ++D A +L  +M +N    +V+TF++L+  F +  
Sbjct: 442 SLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKG 498

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              +  EL+ +M E    P+    + ++D + ++
Sbjct: 499 FVEEAIELVQQMMEHGCTPNLITFNTLLDGITED 532



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 250/545 (45%), Gaps = 47/545 (8%)

Query: 63  SPPPVSSFNILLASLAKNKHYDT--RLNAT-GLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           +P  V ++N L+A   +    D   RL A+  + P+ YTY  LI   C  GRV       
Sbjct: 101 APVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLL 160

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +LR    P+  T+  L++ +   S   +A  +  +++A GC PN++TYN +ING+CR 
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRE 220

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A  +   +++   +      P+TV+Y+T++ GLC     +  + LF +M + N  
Sbjct: 221 DRVDDARQILNRLSSYGFQ------PDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV 274

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+ VT++ L+   C       A  +   M + G   +    N++++ +CK  ++D+A   
Sbjct: 275 PNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEF 334

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM--------------------- 338
           L+ M   G  P+  +Y T++ G C  G+   A+EL   M                     
Sbjct: 335 LNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQ 394

Query: 339 -----------ESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                      E M   GC    V+YN L+NG+C    V+ AL L+  +     +P  +T
Sbjct: 395 KGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTIT 451

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  GL    +++ A +L  EM ++    +  T+   +   C+ G++ EA+EL + + 
Sbjct: 452 YTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMM 511

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  +N L+DG+ +    + A EL   L    +  + +TY+ ++  L  + +++
Sbjct: 512 EHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIE 571

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  +F  +++    P  + ++ ++    +  E  +  +    M     MP+ S   I++
Sbjct: 572 EAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILI 631

Query: 565 DLLVK 569
           + L +
Sbjct: 632 EGLAR 636


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 244/471 (51%), Gaps = 6/471 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + G+ PNL  YN +IN  CK G V+       ++  S  +P+  T+ S+I G   + 
Sbjct: 375 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 434

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            +  A  +F ++   GCEPN +TY+TLINGLC +G    A +L  EM       G++  P
Sbjct: 435 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILH----GIL--P 488

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              T +  I  LC  G  + A  LF+ MK++   P+V TY +LI GLC +     A  LF
Sbjct: 489 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 548

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   GV P+ VT+N +++ L +NR++  A  +L+LM + G+  N  TYN ++ G+C++
Sbjct: 549 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCIL 608

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G   +A  +  +M   G   + V+YN +I GYC +     AL +   M   G KP   +Y
Sbjct: 609 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 668

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G  +I ++E A  LF+EM  DG+  +  TYT  IDG CK+  +  A  L   ++ 
Sbjct: 669 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 728

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  ++Q YN LI GL K      A EL   +    + PNVVTY  MI GLC +G    
Sbjct: 729 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSL 788

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A ++F  M E    P+++T+  LI    +  +  +   L  +++   ++PD
Sbjct: 789 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 227/449 (50%), Gaps = 8/449 (1%)

Query: 141 LHAESRIMEAAAL--FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           +H     M AA +  + ++ + G +PN++ YN +IN LC+ G+   A  + +++      
Sbjct: 358 IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-- 415

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                 P+T TY+++I G C++  +D A  +F QM  E   P+ VTY++LI+GLC +   
Sbjct: 416 ----MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           NEA  L  EM+  G+ P+  T    +  LC     ++A RL   M  +G  PN  TY  L
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           + G C+ G +  A  LF  M   G   + V+YN LIN   +N+ ++ A  +   M   G+
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
              +VTYN +  G   +   + A+ + + M + G +A+  TY T I G C +G    A+ 
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +R   C+ D  +Y  LI G CK  +++ A+ LF  +    L PN VTY  +I G C
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            D ++D A  L   M+ +   P+V T+++LIHG  + N  S   EL   M E+ + P+  
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 771

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + ++D L KN  +  +L  F     QG
Sbjct: 772 TYTAMIDGLCKNGSTSLALEMFNKMIEQG 800



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/538 (28%), Positives = 232/538 (43%), Gaps = 65/538 (12%)

Query: 86   RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            R++  G+FPN  TYN LIN   +  R+   F+    + R+    N  T+N +IKG     
Sbjct: 550  RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILG 609

Query: 146  RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
               +A  +   +   G   N++TYNT+I G C +G+T  AL + + M +G       CKP
Sbjct: 610  DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG------CKP 663

Query: 206  NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
            +  +Y+ +I G CK   ++ A  LF +M D+ + P+ VTY +LI G C     + A  L 
Sbjct: 664  DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723

Query: 266  IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
              M   G +P+V T+NV++  L K      A  L  +M++ G+ PN  TY  ++DG C  
Sbjct: 724  EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783

Query: 326  GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            G  + A E+F  M   GC  + ++Y+ LI    +  +VEEA +L+ E+   G+ P  +TY
Sbjct: 784  GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843

Query: 386  NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL------------------ 427
              +        +VEHA      M + G      TY   I GL                  
Sbjct: 844  VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVV 903

Query: 428  --CKNGYIIEAVELFRTLRILKCELD----IQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
              C  GY     +    +     ELD    +Q  N L+  L  +GR   A EL  S+   
Sbjct: 904  PNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 963

Query: 482  VLVPNVVTYNIMI---------------------QG--------------LCNDGQMDKA 506
             L P+   YN ++                     QG              LC   +  +A
Sbjct: 964  GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 1023

Query: 507  RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            R  F +M      PD +   +LI G +R        E LH M+ ++ MP   I +I+ 
Sbjct: 1024 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 1081



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 210/473 (44%), Gaps = 38/473 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+YTY  LI+  C  G + +    F R+ R    PN  T+N+LI  L    RI  A
Sbjct: 520 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 579

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +   +   G   N++TYN +I G C  G    A+ +   M             N VTY
Sbjct: 580 FVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH------SANLVTY 633

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TII G C  G    A  +   M+D    PD  +Y  LI G C  +    A  LF EM+D
Sbjct: 634 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 693

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VT+  ++D  CK+ K+D A+ LL+ M + G RPN  TYN L+ G       + 
Sbjct: 694 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 753

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AEEL   M   G   + V+Y  +I+G CKN     AL ++ +M+ +G  P ++TY++L  
Sbjct: 754 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 813

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +VE A  LF E++R G+  D  TY   I+    +G +  A      +    C+ 
Sbjct: 814 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 873

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN------------------------ 486
            +  Y  LI GL        A +   +LP   +VPN                        
Sbjct: 874 TLWTYGVLIKGL--KNEYLLADQRLAALPD--VVPNCSFGYQTTDQDAVSVMSAKLAELD 929

Query: 487 ----VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
               V   N ++  L   G+  +A +L   M      PD   ++ L+   +R+
Sbjct: 930 PGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRV 982



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 232/529 (43%), Gaps = 71/529 (13%)

Query: 65   PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P   ++N L+  L +N+           +   GLF N+ TYN +I  +C +G      + 
Sbjct: 558  PNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV 617

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               +L+   + N  T+N++IKG         A  +   ++  GC+P+  +Y  LI G C+
Sbjct: 618  MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 677

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                  A  LF EM +       +C PN VTY+ +IDG CK+  +D A +L   MK    
Sbjct: 678  ISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             P+V TYN LIHGL   N+++ A+ L   M+++G+ P+VVT+  ++D LCKN     A  
Sbjct: 732  RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 299  LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            + + M+++G  PN  TY++L+      GK+  AE LF  +E  G   D+++Y  +I  Y 
Sbjct: 792  MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 359  KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG--------------------------- 391
             + +VE A +    M+  G +PT+ TY  L  G                           
Sbjct: 852  MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQ 911

Query: 392  -------------LFEIH-----QVEHAL--------------KLFDEMQRDGVAADTRT 419
                         L E+      QV++AL              +L   M   G+  D   
Sbjct: 912  TTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEA 971

Query: 420  YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
            Y + +  L +   +  A+ +F+ +    CE+ +  Y  LI  LC+  R K A   F ++ 
Sbjct: 972  YNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENML 1031

Query: 480  HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
                 P+ V   ++I GL  DG  D   +    ME     P    + +L
Sbjct: 1032 MRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 4/240 (1%)

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M      LD++ Q G+R     Y+ L+     +G      + +  M S G + + + YN 
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 390

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +IN  CK+  V +A ++ +++    + P   TY ++ LG    H ++ AL++F++M ++G
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL--IDGLCKSGRLKF 470
              +T TY+T I+GLC +G + EA +L R + IL   L   A+ C   I  LC  G  + 
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREM-ILHGILPT-AHTCTGPIIALCDMGCYED 508

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           AW LF  + +    PNV TY  +I GLC  G +  A  LF  M  +   P+ +T++ LI+
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 269/522 (51%), Gaps = 21/522 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
           M  ++   P   S+N++L  L        A N  YD  + +  + P L+T+ +++  FC 
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD--MLSRKIPPTLFTFGVVMKAFCA 229

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           +  +         + +    PN+  + +LI  L   +R+ EA  L  ++   GC P+  T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           +N +I GLC+       +N   +M N     G    P+ +TY  +++GLCK G VD AK 
Sbjct: 290 FNDVILGLCKFDR----INEAAKMVNRMLIRGFA--PDDITYGYLMNGLCKIGRVDAAKD 343

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDEL 287
           LF ++      P++V +N+LIHG       ++AK +  +M+   G+ P V T+N ++   
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K   +  A  +L  M  +G +PN  +Y  L+DGFC +GKI+ A  +   M + G K + 
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V +N LI+ +CK   + EA+ ++REM  KG KP V T+N+L  GL E+ +++HAL L  +
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M  +GV A+T TY T I+   + G I EA +L   +      LD   YN LI GLC++G 
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A  LF  +      P+ ++ NI+I GLC  G +++A +   +M    + PD++TF+ 
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           LI+G  R         +  K++ + + PD    + ++  L K
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/512 (31%), Positives = 249/512 (48%), Gaps = 52/512 (10%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP + +F +++ +       D+ L+        G  PN   Y  LI+   K  RV+    
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +      P+A TFN +I GL    RI EAA +  ++   G  P+ ITY  L+NGLC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDE 236
           + G    A +LF  +           KP  V ++T+I G    G +D AKA+   M    
Sbjct: 334 KIGRVDAAKDLFYRIP----------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I PDV TYNSLI+G         A  +  +M ++G +P+V ++ +++D  CK  K+DEA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +L+ M   G++PN   +N L+  FC   +I  A E+F  M   GCK D  ++N LI+G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTL---FL----------------------- 390
            C+  E++ AL L R+M+S+G+    VTYNTL   FL                       
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563

Query: 391 ---------GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
                    GL    +V+ A  LF++M RDG A    +    I+GLC++G + EAVE  +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            + +     DI  +N LI+GLC++GR++    +F  L    + P+ VT+N ++  LC  G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            +  A  L  +  E+   P+  T+ +L+   I
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 220/452 (48%), Gaps = 14/452 (3%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R + SC  P   ++N +++ L + +    AA +F  + +    P + T+  ++   C   
Sbjct: 173 RNVYSC-EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               AL+L  +M          C PN+V Y T+I  L K   V++A  L  +M      P
Sbjct: 232 EIDSALSLLRDMTKHG------CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D  T+N +I GLC  +  NEA ++   M+ +G  P  +T+  +M+ LCK  ++D A  L 
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCK 359
                R  +P    +NTL+ GF   G+++ A+ +   M  S G   D  +YN LI GY K
Sbjct: 346 ----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              V  AL +  +M +KG KP V +Y  L  G  ++ +++ A  + +EM  DG+  +T  
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA-WELFCSL 478
           +   I   CK   I EAVE+FR +    C+ D+  +N LI GLC+   +K A W L   +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
             GV V N VTYN +I      G++ +AR L  +M    +  D IT++ LI G  R  E 
Sbjct: 522 SEGV-VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            K   L  KM      P     +I+++ L ++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRS 612



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 8/382 (2%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y  +I  L   G       L +QMKDE I      + S++     A    +  RL +EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172

Query: 269 MD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
            +    +P+  ++NV+++ L        A+ +   M+ R + P   T+  +M  FC + +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I+ A  L   M   GC  + V Y  LI+   K   V EAL L  EM   G  P   T+N 
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           + LGL +  ++  A K+ + M   G A D  TY   ++GLCK G +  A +LF   RI K
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRIPK 350

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSL--PHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            E+ I  +N LI G    GRL  A  +   +   +G+ VP+V TYN +I G   +G +  
Sbjct: 351 PEIVI--FNTLIHGFVTHGRLDDAKAVLSDMVTSYGI-VPDVCTYNSLIYGYWKEGLVGL 407

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A ++  DM      P+V ++ +L+ GF ++ +  +   +L++M    + P+    + ++ 
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467

Query: 566 LLVKNEISLKSLPSFLVQERQG 587
              K     +++  F    R+G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKG 489



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 74/355 (20%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNIL--------LASLAKNKHYDTRLNATGLFPNLYTY 99
           ++A  +   M+  +   P V ++N L        L  LA    +D R    G  PN+Y+Y
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR--NKGCKPNVYSY 427

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            IL++ FCK+G++   +     +      PN   FN LI     E RI EA  +F ++  
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEM------ANG------------NGEIGV 201
            GC+P+V T+N+LI+GLC       AL L  +M      AN              GEI  
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547

Query: 202 VCK----------P-NTVTYSTIIDGLCKEGFVDKAKALFLQM-----KDENIN------ 239
             K          P + +TY+++I GLC+ G VDKA++LF +M        NI+      
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607

Query: 240 ------------------------PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
                                   PD+VT+NSLI+GLC A    +   +F ++  +G+ P
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             VTFN +M  LCK   + +A  LLD  ++ G  PN  T++ L+        ++R
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 169/514 (32%), Positives = 247/514 (48%), Gaps = 12/514 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNIL--LASLAKN---KHYDTRLNATGLFPNLYTYNILI 103
           EA   F  M R    P   S   +L   A L K    K +   +   G  P ++TYNI+I
Sbjct: 78  EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 137

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +C CK G V      F  +      P+  T+NS+I G     R+ +    F ++K   CE
Sbjct: 138 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 197

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+VITYN LIN  C+ G   I L  + EM  GNG      KPN V+YST++D  CKEG +
Sbjct: 198 PDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMM 251

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A   ++ M+   + P+  TY SLI   C   + ++A RL  EM+  GV+ +VVT+  +
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 311

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D LC   +M EA  L   M   GV PN  +YN L+ GF     ++RA EL   ++  G 
Sbjct: 312 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 371

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K D + Y   I G C  +++E A  +  EM   GIK   + Y TL    F+       L 
Sbjct: 372 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 431

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGL 462
           L DEM+   +     T+   IDGLCKN  + +AV+ F R       + +   +  +IDGL
Sbjct: 432 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 491

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK  +++ A  LF  +    LVP+   Y  ++ G    G + +A  L   M E     D+
Sbjct: 492 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 551

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           + +  L+ G    N+  K    L +M  + + PD
Sbjct: 552 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 252/536 (47%), Gaps = 36/536 (6%)

Query: 49  EAFCIFDYML---RMHPSPPPVSSFNILLASLAKNKHYDTRLNATGL-FPNLYTYNILIN 104
           E++CI  ++L   RM+     V     ++ S A    +D   +   +  P    ++ L +
Sbjct: 11  ESYCIVAHILFCARMYYDANSV--LKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFS 68

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
               +G +      F ++ R    P   + N L+       +  +    F  +   G  P
Sbjct: 69  VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 128

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIG--------- 200
            V TYN +I+ +C+ G    A  LFEEM                +G G++G         
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188

Query: 201 -----VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                + C+P+ +TY+ +I+  CK G +      + +MK   + P+VV+Y++L+   C  
Sbjct: 189 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 248

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
               +A + +++M   G+ P+  T+  ++D  CK   + +A RL + M+Q GV  N  TY
Sbjct: 249 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 308

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             L+DG C   ++  AEELFG M++ G   +  SYN LI+G+ K K ++ AL L  E+  
Sbjct: 309 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 368

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +GIKP ++ Y T   GL  + ++E A  + +EM+  G+ A++  YTT +D   K+G   E
Sbjct: 369 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 428

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMI 494
            + L   ++ L  E+ +  +  LIDGLCK+  +  A + F  + +   L  N   +  MI
Sbjct: 429 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 488

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            GLC D Q++ A  LF  M +    PD   +  L+ G  +     +   L  KM E
Sbjct: 489 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 544



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 199/369 (53%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC P    +  +   L   G +++A   F +MK   + P   + N L+H        ++ 
Sbjct: 55  VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           KR F +M+  G +P+V T+N+++D +CK   ++ A  L + M  RG+ P+  TYN+++DG
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F  +G+++     F  M+ M C+ D ++YN LIN +CK  ++   L  YREM   G+KP 
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VV+Y+TL     +   ++ A+K + +M+R G+  +  TYT+ ID  CK G + +A  L  
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +  +  E ++  Y  LIDGLC + R+K A ELF  +    ++PN+ +YN +I G     
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            MD+A +L  +++     PD++ +   I G   + +      ++++MKE  +  ++ I +
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 414

Query: 562 IVVDLLVKN 570
            ++D   K+
Sbjct: 415 TLMDAYFKS 423



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 42/379 (11%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S++ L+ +  K         +   +   GL PN YTY  LI+  CKIG +S  F  
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L+     N  T+ +LI GL    R+ EA  LF K+   G  PN+ +YN LI+G  +
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 179 TGHTMIALNLFEEMANGNG--------------------------------EIGVVCKPN 206
             +   AL L  E+  G G                                E G+  K N
Sbjct: 353 AKNMDRALELLNEL-KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI--KAN 409

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           ++ Y+T++D   K G   +   L  +MK+ +I   VVT+  LI GLC     ++A   F 
Sbjct: 410 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 469

Query: 267 EMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +  D G+Q +   F  ++D LCK+ +++ A+ L + MVQ+G+ P+   Y +LMDG    
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G +  A  L   M  +G K D ++Y  L+ G     ++++A S   EM+ +GI P  V  
Sbjct: 530 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 589

Query: 386 NTLFLGLFEIHQVEHALKL 404
            ++    +E+  ++ A++L
Sbjct: 590 ISVLKKHYELGCIDEAVEL 608



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 99/210 (47%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P    ++ LF  L ++  +E A++ F +M+R  V   TR+    +    K G   +    
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F+ +        +  YN +ID +CK G ++ A  LF  +    LVP+ VTYN MI G   
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++D     F +M++    PDVIT++ LI+ F +  +     E   +MK   + P+   
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
            S +VD   K  +  +++  ++   R G V
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 267


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 268/542 (49%), Gaps = 25/542 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-------LNATGLFPNLYTYN 100
           ++A+ +   M       P + +++ ++    K    D         +   G+ P++ TY 
Sbjct: 26  SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYT 85

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +++  C+ G++         +      P+  TF++LI G     ++ EA  L+ ++   
Sbjct: 86  SVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTS 145

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCK 219
            C  + ++ + LI GLCR      A  LF+EM    +G      KP+ VTY+ +IDG CK
Sbjct: 146 SCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG----AWKPDVVTYTALIDGFCK 201

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G ++KA  +   M+     P+VVTY+SL+HGLC A D ++A  LF  M  +G  P+VVT
Sbjct: 202 SGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVT 261

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +  ++  LC   K+D A  L+D M       +  +YN L+DG+C +G+I  A++LF  M 
Sbjct: 262 YTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMA 321

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQV 398
           +  C  D ++Y  L+ G+C    +EEA  L   M  + GI P VVTY+ +  G     + 
Sbjct: 322 AKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRF 381

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A +   EM    VA +  TY++ IDGLCK G +  A+E+ + +     + D+  Y  +
Sbjct: 382 VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIV 437

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+GLC + R + A  L   + +  + P+V T+N +I  LC  G MD+A  L + M  +  
Sbjct: 438 IEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 497

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKK--------VMPDASIVSIVVDLLVKN 570
            P ++T+  L+ GF R        EL   M+ K         ++P+ +  +++  L    
Sbjct: 498 EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAR 557

Query: 571 EI 572
           EI
Sbjct: 558 EI 559



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 151/479 (31%), Positives = 253/479 (52%), Gaps = 17/479 (3%)

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK-AFGCEPNVITYNTLINGLCRTGH 181
           +R    PN  T+N ++ GL       +A  +  +++      P+++TY+T+ING C+ G 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A  +  EM   +G       P+ VTY++++DGLC++G +D+A  +  +MK + + PD
Sbjct: 61  MDRACEILREMVTRDG-----MAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPD 115

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             T+++LI G C+A   +EA +L+ E++    +   V+ + ++  LC+ R++ EA  L  
Sbjct: 116 KFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQ 175

Query: 302 LMVQR---GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            M  R     +P+  TY  L+DGFC  G + +A ++ G ME   C  + V+Y+ L++G C
Sbjct: 176 EMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 235

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  ++++AL L+R M SKG  P VVTY TL  GL   H+V+ A  L DEM      ADT 
Sbjct: 236 KAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTV 295

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y   +DG C+ G I EA +LF+ +    C  D   Y CL+ G C + RL+ A  L  ++
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355

Query: 479 PHGVLV-PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
                + P+VVTY+I++ G     +  +A +   +M     AP+ +T+  LI G  +   
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLV---KNEISLKSLPSFLVQERQGEVGESN 593
            +   E+L  + +    PD    +IV++ L    + E +L  L   + +  +  VG  N
Sbjct: 416 VNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 259/550 (47%), Gaps = 62/550 (11%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           I   M+      P V ++  ++  L ++   D        +   G+ P+ +T++ LI  +
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF---GCE 163
           C   +V      +  IL S    +A + ++LI GL  E RI EA  LF +++       +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+TY  LI+G C++G+   A+ +   M       G  C PN VTYS+++ GLCK G +
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVME------GRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A  LF +M  +   P+VVTY +LIHGLC A+  + A+ L  EM         V++N +
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM-G 342
           +D  C+  +++EA +L   M  +   P+  TY  L+ GFC   ++  A  L  +M++  G
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D V+Y+I++ GY + K   EA    +EM+++ + P  VTY++L  GL +  +V HA+
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++   + +     D  TYT  I+GLC      EA+ L   +   + E  +  +N +I  L
Sbjct: 421 EVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTY-------------------------------- 490
           C+ G +  AW+L  ++    L P +VTY                                
Sbjct: 477 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSS 536

Query: 491 ----------NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
                     + +I+GLC   ++DKA  +  ++      P       ++ G +R     +
Sbjct: 537 AANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEE 596

Query: 541 VNELLHKMKE 550
             +L++ + +
Sbjct: 597 AGKLINSISK 606



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 139/328 (42%), Gaps = 59/328 (17%)

Query: 64  PPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLG-F 116
           P    S+N LL        + + K     + A    P+  TY  L+  FC   R+    F
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +       +   P+  T++ ++ G     R +EAA    ++ A    PN +TY++LI+GL
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+ G    A+ + +           V KP+ VTY+ +I+GLC     ++A  L  +M ++
Sbjct: 411 CKAGRVNHAMEVLKN----------VDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE---------- 286
            + P V T+NS+I  LC   D +EA +L + M   G++P +VT+  +++           
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520

Query: 287 --------------------------------LCKNRKMDEASRLLDLMVQRGVRPNACT 314
                                           LCK R++D+A  +++ +  R   P    
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 580

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMG 342
              ++DG    G+   A +L  S+  +G
Sbjct: 581 CLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 25/258 (9%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++I++A  ++ K +         + A  + PN  TY+ LI+  CK GRV+     
Sbjct: 363 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM-- 420

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L++   P+  T+  +I+GL    R  EA  L  ++     EP+V T+N++I  LCR
Sbjct: 421 --EVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCR 478

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-- 236
            G    A  L   MA    E      P  VTY+T+++G  + G ++ A  LF  M+ +  
Sbjct: 479 LGDMDEAWKLLVAMAAHGLE------PGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAK 532

Query: 237 ------NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
                 N+ P+   +++LI GLC A + ++A  +  E+  +  +P+      I+D L + 
Sbjct: 533 KSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRA 591

Query: 291 RKMDEASRLLDLMVQRGV 308
            + +EA +L++ + + G+
Sbjct: 592 GRTEEAGKLINSISKVGL 609


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 278/571 (48%), Gaps = 52/571 (9%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCF 106
           +FD M   H   P V ++  ++++  K       K     +   G  PNL TYN++I   
Sbjct: 202 VFDGMC-AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+   +         ++     P+  T++ LI G   E R  EA  +  ++   G +P  
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC--KPNTVTYSTIIDGLCKEGFVD 224
           ITYN LI+G  R G    A  + +EM        V C  + N + ++T+++G+CK G ++
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEM--------VACGIEANLIIWNTLLNGVCKAGKME 372

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           KA  +  +M ++ + PD  TY+ LI G C   +   A  L  EM  + + P+V+T++VI+
Sbjct: 373 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVII 432

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           + LC+   +   + +L  MV  G++PNA  Y TLM      G++  +  +   M   G  
Sbjct: 433 NGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D   YN LI G+CK K +EEA +   EM+ + ++P   TY     G  +  ++E A + 
Sbjct: 493 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 552

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F+EM   GV  +   YT  I+G CK G + EA  +FR +   +   D+Q Y+ LI GL +
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 612

Query: 465 SGRLKFAWELFCSLPHGVLVPN-----------------------------------VVT 489
           +G++  A+ +F  L    L+PN                                   +VT
Sbjct: 613 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 672

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YNI+I GLC  G++++A++LF D+E     P+ +T+  ++ G+ +   P+   +LL +M 
Sbjct: 673 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 732

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            + V PDA I +++++   K E   K+L  F
Sbjct: 733 LRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/577 (30%), Positives = 278/577 (48%), Gaps = 83/577 (14%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N+++  L + +  D  +         GL P+LYTY+ILIN FC   R     + 
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     P   T+N+LI G   +  I +A  +  ++ A G E N+I +NTL+NG+C+
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 367

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL + +EM     E GV  +P++ TYS +I+G C+   + +A  L  +MK   +
Sbjct: 368 AGKMEKALEIMQEMM----EKGV--EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421

Query: 239 NPDVVTYNSLIHGLC---------------------------------HANDWN-EAKRL 264
            P V+TY+ +I+GLC                                 HA +   E  R+
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481

Query: 265 FIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
            +E M +QG+ P V  +N ++   CK ++M+EA   L  M++R +RPNA TY   +DG+ 
Sbjct: 482 ILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYS 541

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G++  A+  F  M S G   +   Y  LI G+CK   V EA S++R ++S+ +   V 
Sbjct: 542 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 601

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY+ L  GL    ++  A  +F E+Q  G+  +  TY + I G CK G + +A +L   +
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL------ 497
            I     DI  YN LIDGLCK+G ++ A  LF  +    L PN VTY  M+ G       
Sbjct: 662 CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP 721

Query: 498 -----------------------------CNDGQMDKARDLFLDMEENAAAPDVITFDML 528
                                        C + + +KA DLF +M E   A   ++F+ L
Sbjct: 722 TAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTL 780

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           I G+ +  +  + N LL +M EK+ +P+    + ++D
Sbjct: 781 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 817



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 249/498 (50%), Gaps = 18/498 (3%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P + TY+++IN  C+ G +         ++ +   PNA  + +L+     E R+ E+ 
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  +++  G  P+V  YN+LI G C+      A     EM           +PN  TY 
Sbjct: 481 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR------LRPNAHTYG 534

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
             IDG  K G ++ A   F +M    + P+V  Y +LI G C   +  EA  +F  ++ +
Sbjct: 535 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            V   V T++V++  L +N KM EA  +   + ++G+ PNA TYN+L+ G C  G +++A
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 654

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M   G   D V+YNILI+G CK  E+E A +L+ ++  +G+ P  VTY  +  G
Sbjct: 655 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 714

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +      A +L +EM   GV  D   Y   ++  CK     +A++LF+ + + K    
Sbjct: 715 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFAS 773

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             ++N LI+G CKSG+L+ A  L   +     +PN VTY  +I   C  G M +A+ L+L
Sbjct: 774 TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 833

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL---- 567
           +M+E    P   T+  L+HG+  I   S+V+ L  +M  K + PD     +++D      
Sbjct: 834 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 893

Query: 568 -------VKNEISLKSLP 578
                  +K+EI +K +P
Sbjct: 894 NVMEACKLKDEILVKGMP 911



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 242/491 (49%), Gaps = 14/491 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILI 103
           AF + D M +     P V ++++++  L +  +          +   GL PN   Y  L+
Sbjct: 409 AFELLDEM-KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
               K GRV    +   R+      P+   +NSLI G     R+ EA     ++      
Sbjct: 468 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 527

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN  TY   I+G  + G   IA   F EM +     GV+  PN   Y+ +I+G CKEG V
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLS----CGVL--PNVGIYTALIEGHCKEGNV 581

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A ++F  +    +  DV TY+ LIHGL      +EA  +F E+ ++G+ P+  T+N +
Sbjct: 582 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   CK   +D+AS+LL+ M  +G+ P+  TYN L+DG C  G+I RA+ LF  +E  G 
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + V+Y  +++GYCK+K    A  L  EM+ +G+ P    YN +     +  + E AL 
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           LF EM   G A+ T ++ T I+G CK+G + EA  L   +   +   +   Y  LID  C
Sbjct: 762 LFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K+G +  A  L+  +    ++P   TY  ++ G  N G M +   LF +M      PD +
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880

Query: 524 TFDMLIHGFIR 534
           T+ ++I  + R
Sbjct: 881 TYYVMIDAYCR 891



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 250/511 (48%), Gaps = 21/511 (4%)

Query: 65  PPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N L+    K K       Y   +    L PN +TY   I+ + K G + +    
Sbjct: 493 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 552

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L     PN   + +LI+G   E  + EA ++F  + +     +V TY+ LI+GL R
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 612

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +F E+     E G++  PN  TY+++I G CK+G VDKA  L  +M  + I
Sbjct: 613 NGKMHEAFGIFSELQ----EKGLL--PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NPD+VTYN LI GLC A +   AK LF ++  +G+ P+ VT+  ++D  CK++    A +
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ M+ RGV P+A  YN +++  C   K  +A +LF  M   G     VS+N LI GYC
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYC 785

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+ +++EA  L  EM+ K   P  VTY +L     +   +  A +L+ EMQ   V    +
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT+ + G    G + E   LF  +     E D   Y  +ID  C+ G +  A    C L
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA----CKL 901

Query: 479 PHGVLVP----NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              +LV     +V  Y+ +IQ LC   +  +   L  ++ E+     + T  ++  GF  
Sbjct: 902 KDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQI 961

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                +  E+L  M +   + + + +  +VD
Sbjct: 962 AGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 992



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 257/513 (50%), Gaps = 45/513 (8%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+L + N L+    K  +V L +  F  +      P+  T+ ++I        + +A  +
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   GC PN++TYN +I GLCR      A+ L   M +     G+V  P+  TY  +
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK----GLV--PDLYTYDIL 291

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I+G C E    +AK + L+M D  + P+ +TYN+LI G     D  +A R+  EM+  G+
Sbjct: 292 INGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI 351

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           + +++ +N +++ +CK  KM++A  ++  M+++GV P++ TY+ L++G C    + RA E
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 411

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M+        ++Y+++ING C+   ++   ++ REMV  G+KP  V Y TL     
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK-------NGYIIEAVELFRTLR-- 444
           +  +VE +  + + M+  G+  D   Y + I G CK         Y++E +E  R LR  
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE--RRLRPN 529

Query: 445 --------------------------ILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFC 476
                                     +L C +  ++  Y  LI+G CK G +  A+ +F 
Sbjct: 530 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    ++ +V TY+++I GL  +G+M +A  +F +++E    P+  T++ LI G  +  
Sbjct: 590 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              K ++LL +M  K + PD    +I++D L K
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 682



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 237/477 (49%), Gaps = 6/477 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN   +++L++ + K+G +      F       F P+  + NSL+  L   +++     +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  + A    P+V TY  +I+  C+ G+   A  +  EM    GE G  C PN VTY+ I
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM----GEKG--CSPNLVTYNVI 256

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I GLC+   +D+A  L   M D+ + PD+ TY+ LI+G C      EAK + +EM+D G+
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P  +T+N ++D   +   +++A R+ D MV  G+  N   +NTL++G C  GK+ +A E
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +   M   G + D  +Y++LI G+C+ + +  A  L  EM  + + PTV+TY+ +  GL 
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
               ++    +  EM  +G+  +   YTT +    K G + E+  +   +R      D+ 
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN LI G CK+ R++ A      +    L PN  TY   I G    G+M+ A   F +M
Sbjct: 497 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 556

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                 P+V  +  LI G  +    ++   +   +  ++V+ D    S+++  L +N
Sbjct: 557 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 613



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 254/527 (48%), Gaps = 22/527 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLY 97
           RE  +N + PN    ++  ++  H     V    ++L           R+   G+ P+++
Sbjct: 449 REMVMNGLKPNAV--VYTTLMTAHAKEGRVEESRMIL----------ERMREQGILPDVF 496

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            YN LI  FCK  R+         +L     PNA T+ + I G      +  A   F ++
Sbjct: 497 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 556

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
            + G  PNV  Y  LI G C+ G+   A ++F  +      +      +  TYS +I GL
Sbjct: 557 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI------LSRRVLQDVQTYSVLIHGL 610

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            + G + +A  +F +++++ + P+  TYNSLI G C   + ++A +L  EM  +G+ P +
Sbjct: 611 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 670

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT+N+++D LCK  +++ A  L D +  RG+ PN  TY  ++DG+C       A +L   
Sbjct: 671 VTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G   D   YN+++N  CK ++ E+AL L++EM+ KG   TV ++NTL  G  +  +
Sbjct: 731 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGK 789

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A  L +EM       +  TYT+ ID  CK G + EA  L+  ++        + Y  
Sbjct: 790 LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTS 849

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L+ G    G +     LF  +    + P+ +TY +MI   C +G + +A  L  ++    
Sbjct: 850 LLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 909

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV---MPDASIVS 561
               V  +D LI    +  E  +V +LL+++ E      +P  S+++
Sbjct: 910 MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 213/466 (45%), Gaps = 40/466 (8%)

Query: 82   HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
             Y   + + G+ PN+  Y  LI   CK G V+  F  F  IL      +  T++ LI GL
Sbjct: 551  RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 610

Query: 142  HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                ++ EA  +F++L+  G  PN  TYN+LI+G C+ G+   A  L EEM         
Sbjct: 611  SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG----- 665

Query: 202  VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
               P+ VTY+ +IDGLCK G +++AK LF  ++   + P+ VTY +++ G C + +   A
Sbjct: 666  -INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724

Query: 262  KRLFIEMMDQGVQP----------------------------------SVVTFNVIMDEL 287
             +L  EM+ +GV P                                  S V+FN +++  
Sbjct: 725  FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGY 784

Query: 288  CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            CK+ K+ EA+ LL+ M+++   PN  TY +L+D  C  G +  A+ L+  M+        
Sbjct: 785  CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844

Query: 348  VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
             +Y  L++GY     + E  +L+ EMV+KGI+P  +TY  +         V  A KL DE
Sbjct: 845  KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 904

Query: 408  MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
            +   G+      Y   I  LCK     E ++L   +      L +   + +  G   +G 
Sbjct: 905  ILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGN 964

Query: 468  LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +  A E+  S+     V N  +   ++ G  N    + + +L   M
Sbjct: 965  MDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 206/430 (47%), Gaps = 19/430 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EG++      EAF +F ++L        V ++++L+  L++N          + L   G
Sbjct: 577 KEGNVT-----EAFSVFRFILSRR-VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN +TYN LI+  CK G V         +      P+  T+N LI GL     I  A 
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            LF  ++  G  PN +TY  +++G C++ +   A  L EEM      +     P+   Y+
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM------LLRGVPPDAFIYN 744

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            I++  CKE   +KA  LF +M ++      V++N+LI G C +    EA  L  EM+++
Sbjct: 745 VILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEK 803

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
              P+ VT+  ++D  CK   M EA RL   M +R V P A TY +L+ G+  +G ++  
Sbjct: 804 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 863

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             LF  M + G + D ++Y ++I+ YC+   V EA  L  E++ KG+  +V  Y+ L   
Sbjct: 864 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQA 923

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  +    LKL +E+   G      T +    G    G + EA E+ R++       +
Sbjct: 924 LCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983

Query: 452 IQAYNCLIDG 461
             +   L+DG
Sbjct: 984 TTSLGDLVDG 993


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 281/554 (50%), Gaps = 38/554 (6%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V ++N ++ +L K +  D       ++   G+ P+  TYN LI+ +  +G+      
Sbjct: 243 PPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVR 302

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  +      PN  T ++ +  L    RI EA   F  + A G + N+I+Y+TL++G  
Sbjct: 303 MFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYA 362

Query: 178 RTGHTMIALNLFEEMA---------------NGNGEIGVV--------------CKPNTV 208
             G  +   NLF  M                NG  + G+V                P+ +
Sbjct: 363 TAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVL 422

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY  +I   C+ G +D A   F  M D+ + P+   Y  LI G C   D  +A+ L  E+
Sbjct: 423 TYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI 482

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            ++G+ P +++F  +++ LCK  ++ EA R+ D++++ G + +   + +L+DG+CL+GK+
Sbjct: 483 RNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKM 542

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  +  +M S+G + D V+Y  L+NG CKN  +++ L L+RE++ KG+KPT  TY  +
Sbjct: 543 SEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGII 602

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GLF   +   A ++F EM   G+A    TY+  + GLC+N    EA+ +F+ L  +  
Sbjct: 603 LDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNV 662

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + DI   N +I  + K+ R + A  LF S+P   LVP V TY IM++ L  +G +++A  
Sbjct: 663 KFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEG 722

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +F  M ++  +P     ++++   +   E  K    + ++  K ++ +AS  S+++ L  
Sbjct: 723 VFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFS 782

Query: 569 ---KNEISLKSLPS 579
              K+   L  LP+
Sbjct: 783 CKGKHREHLNLLPA 796



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 180/576 (31%), Positives = 282/576 (48%), Gaps = 28/576 (4%)

Query: 13  FASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNI 72
           F+S P S+ R   S+L        T       +TP++A  +FD +LR   +  P S  N 
Sbjct: 9   FSSTPPSSPRRLRSALAS-----ATERVRAGTLTPDDAHHLFDGLLR-QTAQVPESVLNG 62

Query: 73  LLASLAKNKHY----DTRLNATGLF-------------PNLYTYNILINCFCKIGRVSLG 115
            L++LA+        D    A  LF             P +YTY+ILI+C C+  R+ L 
Sbjct: 63  FLSALARAPASAALRDGPALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLA 122

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLIN 174
           F  FG +LR     +    +SL++GL    R  EA   LF ++   GC P+ I+Y+T++ 
Sbjct: 123 FAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLK 182

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            +C  G +  AL++        G     C  N V YST++ GL KEG V +A  LF +M 
Sbjct: 183 SVCDDGRSQWALDILRMAVKQGGG----CPCNVVVYSTVVHGLFKEGKVGEACDLFHEMT 238

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + + P+VVTYNS+IH LC A   ++A+ +  +M+  GVQP  VT+N ++       +  
Sbjct: 239 QQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWK 298

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           +A R+   M  RGV PN  T +T +   C  G+I  A E F SM + G K + +SY+ L+
Sbjct: 299 QAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLL 358

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +GY     + +  +L+  MV  GI P    +N L  G  +   V  A+ +F++MQ+ G+ 
Sbjct: 359 HGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLN 418

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY   I   C+ G + +A++ F  +     E +   Y CLI G C  G L  A EL
Sbjct: 419 PDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEEL 478

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              + +  L P ++++  +I  LC +G++ +A+ +F  +       DV  F  LI G+  
Sbjct: 479 VYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCL 538

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           I + S+   +   M    + PD      +V+   KN
Sbjct: 539 IGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 266/570 (46%), Gaps = 63/570 (11%)

Query: 50  AFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYDT-------RLNATGLFPNLYTYN 100
           AF  F  +LR  M      VSS   LL  L   K  D        R+   G  P+  +Y+
Sbjct: 122 AFAFFGCLLRQGMKADVIVVSS---LLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYS 178

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTP------NAATFNSLIKGLHAESRIMEAAALF 154
            ++   C  GR          ILR           N   +++++ GL  E ++ EA  LF
Sbjct: 179 TVLKSVCDDGRSQWAL----DILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLF 234

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++   G  PNV+TYN++I+ LC+      A  +  +M  GNG      +P+ VTY+T+I
Sbjct: 235 HEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV-GNG-----VQPDNVTYNTLI 288

Query: 215 DG-----------------------------------LCKEGFVDKAKALFLQMKDENIN 239
            G                                   LCK G +++A+  F  M  +   
Sbjct: 289 HGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHK 348

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
            ++++Y++L+HG   A    +   LF  M+  G+ P+   FN++++   K   + EA  +
Sbjct: 349 LNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFI 408

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            + M +RG+ P+  TY  ++  FC MG ++ A + F  M   G + +   Y  LI G+C 
Sbjct: 409 FEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT 468

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           + ++ +A  L  E+ +KG+ P ++++ +L   L +  +V  A ++FD + R G  AD   
Sbjct: 469 HGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNI 528

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           +T+ IDG C  G + EA  +   +  +  E DI  Y  L++G CK+GR+     LF  L 
Sbjct: 529 FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELL 588

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           H  + P   TY I++ GL + G+   A+++F +M E+  A  + T+ +L+ G  R N   
Sbjct: 589 HKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTE 648

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +   +  K+    V  D  I++I++  + K
Sbjct: 649 EAITVFQKLCAMNVKFDIVILNIMISKMFK 678



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 215/449 (47%), Gaps = 40/449 (8%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +A+ LF  M+ G G    V  P   TYS +ID  C+   +D A A F  +  + +  DV+
Sbjct: 82  LAVALFNRMSTGTGP--RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 244 TYNSLIHGLCHANDWNEA-KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             +SL+ GLC A   +EA   LF  M + G  P  ++++ ++  +C + +   A  +L +
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 303 MVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
            V++G     N   Y+T++ G    GK+  A +LF  M   G   + V+YN +I+  CK 
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + V++A  + R+MV  G++P  VTYNTL  G   + Q + A+++F EM   GV  +T T 
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY------------------------- 455
           +TF+  LCK+G I EA E F ++     +L+I +Y                         
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379

Query: 456 ----------NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                     N L++G  K G ++ A  +F  +    L P+V+TY  +I   C  G MD 
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A D F  M +    P+   +  LI GF    +  K  EL+++++ K + P     + +++
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLIN 499

Query: 566 LLVKNEISLKSLPSFLVQERQGEVGESNV 594
            L K     ++   F +  R GE  + N+
Sbjct: 500 HLCKEGRVFEAQRIFDMIIRTGEKADVNI 528



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 139/310 (44%), Gaps = 22/310 (7%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN------ILLASL 77
           +F+SL+ H      +EG +      EA  IFD ++R       V+ F        L+  +
Sbjct: 493 SFASLINHL----CKEGRVF-----EAQRIFDMIIRT-GEKADVNIFTSLIDGYCLIGKM 542

Query: 78  AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
           ++       + + G+ P++ TY  L+N  CK GR+  G I F  +L     P   T+  +
Sbjct: 543 SEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGII 602

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           + GL    R   A  +F ++   G    + TY+ L+ GLCR   T  A+ +F+++   N 
Sbjct: 603 LDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMN- 661

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                 K + V  + +I  + K    ++A+ LF  + D  + P V TY  ++  L     
Sbjct: 662 -----VKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGS 716

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EA+ +F  M+  G+ P+    NVI+  L +  ++ +A   +  +  + +   A T + 
Sbjct: 717 VEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASM 776

Query: 318 LMDGFCLMGK 327
           L+  F   GK
Sbjct: 777 LLSLFSCKGK 786


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 247/478 (51%), Gaps = 6/478 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   GL PN YTY I+    C+  R++   + F  + ++   P+    ++LI G   E  
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I E   +   + + G   N+ITYN LI+GLC+ G    A  + +      G + + CKPN
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK------GMVTLGCKPN 402

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + T+  +I+G C+E  + +A  L  +M+  N+ P  V+Y ++I+GLCH  D + A +L  
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M   G++P+VV +++++       +++EA RLLD M   GV P+   YN ++      G
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 522

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K+  A      ++  G K D V++   I GY K  ++ EA   + EM+  G+ P    Y 
Sbjct: 523 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 582

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G F+   +  AL +F  +   GV  D +T + FI GL KNG + EA+++F  L+  
Sbjct: 583 VLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 642

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  Y+ LI G CK G ++ A+EL   +    + PN+  YN ++ GLC  G + +A
Sbjct: 643 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 702

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           R LF  M E    PD +T+  +I G+ +    ++   L H+M  K V P + + + +V
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 155/476 (32%), Positives = 246/476 (51%), Gaps = 9/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G+  NL TYN+LI+  CK G++     I  G +   C  PN+ TF  LI+G   E  +  
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGC-KPNSRTFCLLIEGYCREHNMGR 421

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  +++     P+ ++Y  +INGLC      +A  L E+M           KPN V 
Sbjct: 422 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVV 475

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I     EG +++A+ L   M    + PD+  YN++I  L  A    EA    +E+ 
Sbjct: 476 YSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 535

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P  VTF   +    K  KM EA++  D M+  G+ PN   Y  L++G    G + 
Sbjct: 536 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 595

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  +F  + ++G   D  + +  I+G  KN  V+EAL ++ E+  KG+ P V TY++L 
Sbjct: 596 EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +VE A +L DEM   G+A +   Y   +DGLCK+G I  A +LF  +     E
Sbjct: 656 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y+ +IDG CKS  +  A+ LF  +P   + P+   YN ++ G C +G M+KA +L
Sbjct: 716 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 775

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           F +M +   A   ++F+ LI G+ +  +  + ++L  +M  K++MPD    + V+D
Sbjct: 776 FREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 253/486 (52%), Gaps = 7/486 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++  +GL PN+  Y+ILI  +   GR+         +  S   P+   +N++I  L    
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 522

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ EA+    +++  G +P+ +T+   I G  +TG    A   F+EM +          P
Sbjct: 523 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG------LMP 576

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N   Y+ +I+G  K G + +A ++F ++    + PDV T ++ IHGL       EA ++F
Sbjct: 577 NNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 636

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            E+ ++G+ P V T++ ++   CK  ++++A  L D M  +G+ PN   YN L+DG C  
Sbjct: 637 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 696

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G I RA +LF  M   G + D V+Y+ +I+GYCK++ V EA SL+ EM SKG++P    Y
Sbjct: 697 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 756

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  G  +   +E A+ LF EM + G A  T ++ T IDG CK+  I EA +LF+ +  
Sbjct: 757 NALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIA 815

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            +   D   Y  +ID  CK+G+++ A  LF  +    L+ + VTY  ++ G    GQ  +
Sbjct: 816 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 875

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
              LF  M      PD +T+ ++I+   + +   +  +L  ++  K ++   +I  +++ 
Sbjct: 876 VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 935

Query: 566 LLVKNE 571
            L K E
Sbjct: 936 ALCKRE 941



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 251/511 (49%), Gaps = 12/511 (2%)

Query: 67  VSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++  L+ +L K       K     ++  GL PN + Y+++I   C++G +        
Sbjct: 228 VYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKR 287

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      PN  T+  +  GL    R+ EA   F +++  G +P+    + LI+G  R G
Sbjct: 288 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 347

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                L + + M +    I      N +TY+ +I GLCK G ++KA  +   M      P
Sbjct: 348 DIDEVLRIKDVMVSCGIPI------NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP 401

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  T+  LI G C  ++   A  L  EM  + + PS V++  +++ LC  + +  A++LL
Sbjct: 402 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 461

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M   G++PN   Y+ L+  +   G+I  A  L   M   G   D   YN +I+   K 
Sbjct: 462 EKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 521

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++EEA +   E+  +G+KP  VT+    LG  +  ++  A K FDEM   G+  +   Y
Sbjct: 522 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 581

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  I+G  K G ++EA+ +FR L  L    D+Q  +  I GL K+GR++ A ++F  L  
Sbjct: 582 TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 641

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVP+V TY+ +I G C  G+++KA +L  +M     AP++  ++ L+ G  +  +  +
Sbjct: 642 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 701

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +L   M EK + PD+   S ++D   K+E
Sbjct: 702 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 732



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 238/469 (50%), Gaps = 10/469 (2%)

Query: 81   KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
            K++D  L+  GL PN   Y +LIN   K G +      F R+      P+  T ++ I G
Sbjct: 564  KYFDEMLDH-GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622

Query: 141  LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
            L    R+ EA  +F++LK  G  P+V TY++LI+G C+ G    A  L +EM       G
Sbjct: 623  LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK----G 678

Query: 201  VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
            +   PN   Y+ ++DGLCK G + +A+ LF  M ++ + PD VTY+++I G C + +  E
Sbjct: 679  IA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 736

Query: 261  AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
            A  LF EM  +GVQP    +N ++   CK   M++A  L   M+Q+G      ++NTL+D
Sbjct: 737  AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLID 795

Query: 321  GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            G+C   KI  A +LF  M +     D V+Y  +I+ +CK  ++EEA  L++EM  + +  
Sbjct: 796  GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 855

Query: 381  TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              VTY +L  G  ++ Q      LF++M   GV  D  TY   I   CK   ++EA +L 
Sbjct: 856  DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL- 914

Query: 441  RTLRILKCELDIQA-YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            R   + K  L     ++ LI  LCK   L  A +L   +    L P++   N +++    
Sbjct: 915  RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974

Query: 500  DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             G+MD+A  +F  ++     PD  T   L++G +   +      L+ ++
Sbjct: 975  AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 162/569 (28%), Positives = 260/569 (45%), Gaps = 51/569 (8%)

Query: 46  TPNEAFCIFD---YMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNL 96
           TP  +  I D   +  R +    PV  F+IL+ S  +    D   N         +  +L
Sbjct: 135 TPYSSSSILDSVLFWFRNYGGSSPVV-FDILIDSYKRMGMLDEAANVFFVAKNDSILISL 193

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
              N L+    K G + L +  +  +L +    +  T+  L+  L     +  A  +  +
Sbjct: 194 IRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIE 253

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +   G  PN   Y+ +I G+C+ G    A+ L   M    GE G+V  PNT TY+ I  G
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM----GEKGLV--PNTYTYTIITAG 307

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LC+   +++AK  F +M+   + PD    ++LI G     D +E  R+   M+  G+  +
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 367

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           ++T+NV++  LCK  KM++A+ +L  MV  G +PN+ T+  L++G+C    + RA EL  
Sbjct: 368 LITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD 427

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            ME        VSY  +ING C  K++  A  L  +M   G+KP VV Y+ L +      
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEG 487

Query: 397 QVEHALKLFD-----------------------------------EMQRDGVAADTRTYT 421
           ++E A +L D                                   E+Q  G+  D  T+ 
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            FI G  K G + EA + F  +       +   Y  LI+G  K+G L  A  +F  L   
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHAL 607

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            ++P+V T +  I GL  +G++ +A  +F +++E    PDV T+  LI GF +  E  K 
Sbjct: 608 GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 667

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            EL  +M  K + P+  I + +VD L K+
Sbjct: 668 FELHDEMCLKGIAPNIFIYNALVDGLCKS 696



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 205/425 (48%), Gaps = 6/425 (1%)

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V TY  L+  LC+TG    A  +  EM     E G+   PN   YS +I+G+C+ G +D
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEM----DEKGL--NPNEFIYSLVIEGMCQVGDID 280

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  L   M ++ + P+  TY  +  GLC A   NEAK  F EM   G++P     + ++
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D   +   +DE  R+ D+MV  G+  N  TYN L+ G C  GK+ +A E+   M ++GCK
Sbjct: 341 DGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCK 400

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +  ++ +LI GYC+   +  AL L  EM  + + P+ V+Y  +  GL     +  A KL
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            ++M   G+  +   Y+  I      G I EA  L   +       DI  YN +I  L K
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +G+++ A      +    L P+ VT+   I G    G+M +A   F +M ++   P+   
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 580

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
           + +LI+G  +     +   +  ++    V+PD    S  +  L+KN    ++L  F   +
Sbjct: 581 YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640

Query: 585 RQGEV 589
            +G V
Sbjct: 641 EKGLV 645



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 176/379 (46%), Gaps = 69/379 (18%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V +++ L++   K    +            G+ PN++ YN L++  CK G +      
Sbjct: 646  PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  +      P++ T++++I G      + EA +LF ++ + G +P+   YN L++G C+
Sbjct: 706  FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 765

Query: 179  TGHTMIALNLFEEMANG--------NGEIGVVCK--------------------PNTVTY 210
             G    A+NLF EM           N  I   CK                    P+ VTY
Sbjct: 766  EGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 825

Query: 211  STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            +T+ID  CK G +++A  LF +M++ N+  D VTY SL++G       +E   LF +M+ 
Sbjct: 826  TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVA 885

Query: 271  QGVQPSVVTFNVIM----------------DE-------------------LCKNRKMDE 295
            +GV+P  VT+ +++                DE                   LCK   + E
Sbjct: 886  KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 945

Query: 296  ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            AS+LLD M + G++P+    NTL+  F   GK++ A  +F  ++S+G   D  +   L+N
Sbjct: 946  ASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 1005

Query: 356  GYCKNKEVEEALSLYREMV 374
            G   + + E+A +L +++V
Sbjct: 1006 GNLNDTDSEDARNLIKQLV 1024


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 246/478 (51%), Gaps = 6/478 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   GL PN YTY I+    C+  R++   + F  + ++   P+    ++LI G   E  
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I E   +   + + G   N+ITYN LI+GLC+ G    A  + +      G I + CKPN
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK------GMITLGCKPN 313

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + T+  +I+G C+E  + +A  L  +M+  N+ P  V+Y ++I+GLCH  D + A +L  
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M   G++P+VV ++ ++       +++EA RLLD M   GV P+   YN ++      G
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K+  A      ++  G K D V++   I GY K  ++ EA   + EM+  G+ P    Y 
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G F+   +  AL +F  +   GV  D +T + FI GL KNG + EA+++F  L+  
Sbjct: 494 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  Y+ LI G CK G ++ A+EL   +    + PN+  YN ++ GLC  G + +A
Sbjct: 554 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 613

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           R LF  M E    PD +T+  +I G+ +    ++   L H+M  K V P + + + +V
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 158/476 (33%), Positives = 248/476 (52%), Gaps = 9/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G+  NL TYN+LI+  CK G++     I  G I   C  PN+ TF  LI+G   E  +  
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGC-KPNSRTFCLLIEGYCREHNMGR 332

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  +++     P+ ++Y  +INGLC      +A  L E+M           KPN V 
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVV 386

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YST+I G   EG +++A+ L   M    + PD+  YN++I  L  A    EA    +E+ 
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P  VTF   +    K  KM EA++  D M+  G+ PN   Y  L++G    G + 
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 506

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  +F  + ++G   D  + +  I+G  KN  V+EAL ++ E+  KG+ P V TY++L 
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +VE A +L DEM   G+A +   Y   +DGLCK+G I  A +LF  +     E
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y+ +IDG CKS  +  A+ LF  +P   + P+   YN ++ G C +G M+KA +L
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           F +M +   A   ++F+ LI G+ +  +  + ++L  +M  K++MPD    + V+D
Sbjct: 687 FREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 251/486 (51%), Gaps = 7/486 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++  +GL PN+  Y+ LI  +   GR+         +  S   P+   +N++I  L    
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ EA+    +++  G +P+ +T+   I G  +TG    A   F+EM +          P
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG------LMP 487

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N   Y+ +I+G  K G + +A ++F  +    + PDV T ++ IHGL       EA ++F
Sbjct: 488 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 547

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            E+ ++G+ P V T++ ++   CK  ++++A  L D M  +G+ PN   YN L+DG C  
Sbjct: 548 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 607

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G I RA +LF  M   G + D V+Y+ +I+GYCK++ V EA SL+ EM SKG++P    Y
Sbjct: 608 GDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 667

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  G  +   +E A+ LF EM + G A  T ++ T IDG CK+  I EA +LF+ +  
Sbjct: 668 NALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIA 726

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            +   D   Y  +ID  CK+G+++ A  LF  +    L+ + VTY  ++ G    GQ  +
Sbjct: 727 KQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSE 786

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
              LF  M      PD +T+ ++I+   + +   +  +L  ++  K ++   +I  +++ 
Sbjct: 787 VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 846

Query: 566 LLVKNE 571
            L K E
Sbjct: 847 ALCKRE 852



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 237/469 (50%), Gaps = 10/469 (2%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K++D  L+  GL PN   Y +LIN   K G +      F  +      P+  T ++ I G
Sbjct: 475 KYFDEMLDH-GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L    R+ EA  +F++LK  G  P+V TY++LI+G C+ G    A  L +EM       G
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK----G 589

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           +   PN   Y+ ++DGLCK G + +A+ LF  M ++ + PD VTY+++I G C + +  E
Sbjct: 590 IA--PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 647

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  LF EM  +GVQP    +N ++   CK   M++A  L   M+Q+G      ++NTL+D
Sbjct: 648 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLID 706

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+C   KI  A +LF  M +     D V+Y  +I+ +CK  ++EEA  L++EM  + +  
Sbjct: 707 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 766

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             VTY +L  G  ++ Q      LF++M   GV  D  TY   I   CK   ++EA +L 
Sbjct: 767 DTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL- 825

Query: 441 RTLRILKCELDIQA-YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           R   + K  L     ++ LI  LCK   L  A +L   +    L P++   + +++    
Sbjct: 826 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 885

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            G+MD+A  +F  ++     PD  T   L++G +   +      L+ ++
Sbjct: 886 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 253/529 (47%), Gaps = 21/529 (3%)

Query: 46  TPNEAFCIFDYML---RMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNIL 102
           TP  +  I D +L   R +    PV  F+IL+ S  +    D   N   +  N      L
Sbjct: 133 TPYSSSSILDSVLFWFRNYGGSSPVV-FDILIDSYKRMGMLDEAANVFFVAKNDSILISL 191

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I C         G +           PN  T+  +  GL    R+ EA   F +++  G 
Sbjct: 192 IRCNSLRSMGEKGLV-----------PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGL 240

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           +P+    + LI+G  R G     L + + M +    I      N +TY+ +I GLCK G 
Sbjct: 241 KPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI------NLITYNVLIHGLCKFGK 294

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++KA  +   M      P+  T+  LI G C  ++   A  L  EM  + + PS V++  
Sbjct: 295 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 354

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC  + +  A++LL+ M   G++PN   Y+TL+ G+   G+I  A  L   M   G
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D   YN +I+   K  ++EEA +   E+  +G+KP  VT+    LG  +  ++  A 
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 474

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           K FDEM   G+  +   YT  I+G  K G ++EA+ +FR L  L    D+Q  +  I GL
Sbjct: 475 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 534

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+GR++ A ++F  L    LVP+V TY+ +I G C  G+++KA +L  +M     AP++
Sbjct: 535 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             ++ L+ G  +  +  +  +L   M EK + PD+   S ++D   K+E
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 185/400 (46%), Gaps = 18/400 (4%)

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENI------------------NPDVVTYNSLI 249
           V +  +ID   + G +D+A  +F   K+++I                   P+  TY  + 
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIIT 216

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            GLC A   NEAK  F EM   G++P     + ++D   +   +DE  R+ D+MV  G+ 
Sbjct: 217 AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP 276

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            N  TYN L+ G C  GK+ +A E+   M ++GCK +  ++ +LI GYC+   +  AL L
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EM  + + P+ V+Y  +  GL     +  A KL ++M   G+  +   Y+T I G   
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 396

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G I EA  L   +       DI  YN +I  L K+G+++ A      +    L P+ VT
Sbjct: 397 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 456

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           +   I G    G+M +A   F +M ++   P+   + +LI+G  +     +   +   + 
Sbjct: 457 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
              V+PD    S  +  L+KN    ++L  F   + +G V
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 556



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 69/379 (18%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L++   K    +            G+ PN++ YN L++  CK G +      
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P++ T++++I G      + EA +LF ++ + G +P+   YN L++G C+
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 676

Query: 179 TGHTMIALNLFEEMANG--------NGEIGVVCK--------------------PNTVTY 210
            G    A+NLF EM           N  I   CK                    P+ VTY
Sbjct: 677 EGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 736

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+ID  CK G +++A  LF +M++ N+  D VTY SL++G       +E   LF +M+ 
Sbjct: 737 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVA 796

Query: 271 QGVQPSVVTFNVIM----------------DE-------------------LCKNRKMDE 295
           +GV+P  VT+ +++                DE                   LCK   + E
Sbjct: 797 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 856

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           AS+LLD M + G++P+    +TL+  F   GK++ A  +F  ++S+G   D  +   L+N
Sbjct: 857 ASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 916

Query: 356 GYCKNKEVEEALSLYREMV 374
           G   + + E+A +L +++V
Sbjct: 917 GNLNDTDSEDARNLIKQLV 935


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 176/572 (30%), Positives = 284/572 (49%), Gaps = 56/572 (9%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIG 110
           +R     P V  +N+L+  L + K        +D   N   L  ++ TYN LI+ +CK+G
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCN-INLVGSIVTYNTLIDGYCKVG 260

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
            +   F    R+      PN  TFNSL+ GL    ++ EA +L  +++  G  P+  TY+
Sbjct: 261 ELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYS 320

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            L +GL R      A+ L+E+      E G+  + N  T S +++GLCK+G V+KA+ + 
Sbjct: 321 ILFDGLLRCDDGNGAMELYEQAT----EKGI--RINNYTGSILLNGLCKQGKVEKAEEIL 374

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCK 289
            +  +  +  D V YN+ ++G C   D N+A  L IE M+  G++P+ +TFN ++D+ C 
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKAI-LTIERMESFGLRPNSITFNSLIDKFCD 433

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
            ++MD+A   +  M ++GV P+  TYNTL+DG+  +   +R  ++   ME +G K + VS
Sbjct: 434 MKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVS 493

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  LIN  CK+ ++ EA  + R+M+ +G+ P    YN L  G   + +V+ AL+ FDEM 
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVE------------------------------- 438
           R  ++    TY   IDGLCK G + EA +                               
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613

Query: 439 ----LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
               L+ T++ L  +  ++ Y+ LI G  K G ++   +L+  +    L+P+ V YN MI
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMI 672

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
                 G   KA  L   M +    PD +T++ LI G  R  + S + +L++ MK K++ 
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           P A       D+LVK    LK      V  R+
Sbjct: 733 PKAD----TYDILVKGHCDLKDFSGAYVWYRE 760



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 247/466 (53%), Gaps = 6/466 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G   + + Y   I    K+  + +G      + +    PN   +N LI GL  E RI +
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F ++       +++TYNTLI+G C+ G    A  + E M   +        PN +T
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKS------VAPNIIT 283

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +++++ GLCK   + +A++L  +M+     PD  TY+ L  GL   +D N A  L+ +  
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT 343

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           ++G++ +  T +++++ LCK  K+++A  +L    + G+  +   YNT ++G+C +G +N
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A      MES G + + +++N LI+ +C  KE+++A    ++M  KG+ P+V TYNTL 
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  ++   +   ++ ++M+  GV  +  +Y + I+ LCK+G I+EA  + R +      
Sbjct: 464 DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL 523

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            + Q YN LIDG C  G++K A   F  +    + P +VTYN++I GLC  G++ +A D 
Sbjct: 524 PNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDF 583

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
              +  +  +PDVIT++ LI G+      SK   L   MK   + P
Sbjct: 584 LTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 251/547 (45%), Gaps = 53/547 (9%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +FN LL+ L K  K  + R     +   G  P+ YTY+IL +   +    +     
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           + +        N  T + L+ GL  + ++ +A  +  K    G   + + YNT +NG CR
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+   E M +     G+  +PN++T++++ID  C    +DKA+    +M ++ +
Sbjct: 399 IGDMNKAILTIERMES----FGL--RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P V TYN+LI G      ++   ++  +M + GV+P+VV++  +++ LCK+ K+ EA  
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  M+ RGV PNA  YN L+DG C++GK+  A   F  M         V+YN+LI+G C
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  ++ EA     ++ S G  P V+TYN+L  G      V   L L++ M+  G+    R
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR 632

Query: 419 TYTTFIDGLCKNGYIIEAVE-LFRTL-------------RILKCELDI------------ 452
           TY   I G  K G  IE VE L+  +              ++ C  +I            
Sbjct: 633 TYHPLISGCSKEG--IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQG 690

Query: 453 ----------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
                       YN LI G  + G+L    +L  ++    L P   TY+I+++G C+   
Sbjct: 691 MLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKD 750

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM---PDASI 559
              A   + +M EN   P+    + L  G  +     +V  +  +M  K ++   P    
Sbjct: 751 FSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGIINHWPSKEE 810

Query: 560 VSIVVDL 566
           +S V  +
Sbjct: 811 ISAVAKM 817


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 251/508 (49%), Gaps = 30/508 (5%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++ T N LI   C+  +V    +    +      P+  TF +L++G   E  I  A
Sbjct: 190 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA 249

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE-EMANG-------------- 195
             + TK+   GC P  +T N LING C+ G    AL   + E+A+G              
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHC 309

Query: 196 ---NGEIGVVCK-----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              NG +    K           P+  TY+T+I+ L K G +D+AK +  QM D    PD
Sbjct: 310 LCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPD 369

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             T+N+LI  LC  N   EA  L  E+  +G+ P V TFN++++ LCK        RL +
Sbjct: 370 TTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFE 429

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G  P+  TYN L+D  C MGK+  A +L   MES GC    V+YN +I+  CK  
Sbjct: 430 EMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQM 489

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +EEA  ++ +M + GI  + VT+NTL  GL +  +++ A +L ++M ++G+     TY 
Sbjct: 490 RIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYN 549

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + +   CK G + +A ++  T+     E+D+  Y  LI+GLCK+GR + A +L   +   
Sbjct: 550 SILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 609

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK- 540
            + P    YN +IQ L     +  A  LF +M E    PD +T+ ++  G  R   P K 
Sbjct: 610 GIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKE 669

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLV 568
             + L +M  K  MP+ S   ++ + L+
Sbjct: 670 AFDFLVEMVNKGFMPEFSSFRMLAEGLL 697



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 259/511 (50%), Gaps = 17/511 (3%)

Query: 61  HPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRV-- 112
           H   P  ++F  L+       S+       T++  TG  P   T N+LIN +CK+GRV  
Sbjct: 224 HAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVED 283

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
           +LG+I   + +   F P+  T+N+ +  L     +  A  +   +   G +P+V TYNT+
Sbjct: 284 ALGYIQ--KEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           IN L + G    A  +  +M +        C P+T T++T+I  LC +  +++A  L  +
Sbjct: 342 INCLSKNGELDEAKGIVNQMVDRG------CLPDTTTFNTLIVALCSQNRLEEALDLARE 395

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +  + ++PDV T+N LI+ LC   D +   RLF EM   G  P  VT+N+++D LC   K
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK 455

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +  A  LL  M   G   +  TYNT++D  C   +I  AEE+F  M++ G     V++N 
Sbjct: 456 LVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNT 515

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+G CK K +++A  L  +MV +G++P+ +TYN++     +   ++ A  + + M  +G
Sbjct: 516 LIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANG 575

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              D  TY T I+GLCK G    A++L R +RI       +AYN +I  L +   L+ A 
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL 635

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLC-NDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            LF  +      P+ +TY I+ +GLC   G + +A D  ++M      P+  +F ML  G
Sbjct: 636 SLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 695

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            + +     +   +  + EK    ++ + +I
Sbjct: 696 LLNLGMDDYLISAIELIIEKAKFRESDVSAI 726



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 241/506 (47%), Gaps = 9/506 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +LN  G+  +   YN L+N   +  R+ L    +  +      P+  T N+LIK L    
Sbjct: 150 QLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAH 209

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++  A  +  ++ +    P+  T+ TL+ G    G    AL +  +M     E G  C P
Sbjct: 210 QVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMM----ETG--CSP 263

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             VT + +I+G CK G V+ A     +   +   PD VTYN+ +H LC     + A ++ 
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+ +G  P V T+N +++ L KN ++DEA  +++ MV RG  P+  T+NTL+   C  
Sbjct: 324 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ 383

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            ++  A +L   +   G   D  ++NILIN  CK  +    + L+ EM S G  P  VTY
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTY 443

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L   L  + ++ +AL L  EM+ +G    T TY T ID LCK   I EA E+F  +  
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                    +N LIDGLCK+ R+  A EL   +    L P+ +TYN ++   C  G + K
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A D+   M  N    DV+T+  LI+G  +        +LL  M+ K + P     + V+ 
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 623

Query: 566 LLVKNEISLKSLPSFLVQERQGEVGE 591
            L +      +L  F       EVGE
Sbjct: 624 SLFRRNNLRDALSLF---REMTEVGE 646



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 191/408 (46%), Gaps = 7/408 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV-VCKPNTVTYSTIIDGLCKEGF 222
           P+   Y  +I  L   G   +   L  EM     E G  V +    +Y+ +        F
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARL------RRF 140

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            D    +  Q+    +  D   YN L++ L   +     + ++ EM D+G+QP VVT N 
Sbjct: 141 DDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNT 200

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LC+  ++  A  +L+ M    V P+  T+ TLM GF   G I  A  +   M   G
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C    V+ N+LINGYCK   VE+AL   ++ ++ G +P  VTYNT    L +   V HAL
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           K+ D M ++G   D  TY T I+ L KNG + EA  +   +    C  D   +N LI  L
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C   RL+ A +L   L    L P+V T+NI+I  LC  G       LF +M+ +  APD 
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +T+++LI     + +     +LL +M+           + ++D L K 
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQ 488



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 204/448 (45%), Gaps = 5/448 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           + R  F P+ A +  +I+ L           L  +++  G E       + +    R   
Sbjct: 80  LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRR 139

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A++L     N  G      + +T  Y+ +++ L +   +   ++++ +M D  I PD
Sbjct: 140 FDDAVDLVRNQLNTFG-----VQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPD 194

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VVT N+LI  LC A+    A  +  EM    V P   TF  +M    +   ++ A R+  
Sbjct: 195 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKT 254

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M++ G  P   T N L++G+C MG++  A        + G + D V+YN  ++  C+N 
Sbjct: 255 KMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNG 314

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V  AL +   M+ +G  P V TYNT+   L +  +++ A  + ++M   G   DT T+ 
Sbjct: 315 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 374

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I  LC    + EA++L R L +     D+  +N LI+ LCK G       LF  +   
Sbjct: 375 TLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 434

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+ VTYNI+I  LC+ G++  A DL  +ME N      +T++ +I    +     + 
Sbjct: 435 GCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEA 494

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
            E+  +M    +   A   + ++D L K
Sbjct: 495 EEVFDQMDAHGISRSAVTFNTLIDGLCK 522


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 235/424 (55%), Gaps = 9/424 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G  P++ TYN++I+ +CK G ++       R+     +P+  T+N++++ L    +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A  +  ++    C P+VITY  LI   CR      A+ L +EM +        C P+
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG------CTPD 273

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ +++G+CKEG +D+A      M      P+V+T+N ++  +C    W +A++L  
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ +G  PSVVTFN++++ LC+   +  A  +L+ M + G +PN+ +YN L+ GFC   
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K++RA E    M S GC  D V+YN ++   CK+ +VE+A+ +  ++ SKG  P ++TYN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL +  +   A+KL DEM+   +  DT TY++ + GL + G + EA++ F     +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               +   +N ++ GLCK+ +   A +    + +    P   +Y I+I+GL  +G   +A
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573

Query: 507 RDLF 510
            +L 
Sbjct: 574 LELL 577



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 245/468 (52%), Gaps = 9/468 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++     LI  FC++G+          +  S   P+  T+N +I G      I  A
Sbjct: 132 GNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            ++  ++      P+V+TYNT++  LC +G    A+ + + M   +      C P+ +TY
Sbjct: 192 LSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITY 242

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+  C++  V +A  L  +M+D    PDVVTYN L++G+C     +EA +   +M  
Sbjct: 243 TILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G QP+V+T N+I+  +C   +  +A +LL  M+++G  P+  T+N L++  C  G + R
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++   M   GC+ + +SYN L++G+CK K+++ A+     MVS+G  P +VTYNT+  
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +VE A+++ +++   G +    TY T IDGL K G   +A++L   +R    + 
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y+ L+ GL + G++  A + F       + PN VT+N ++ GLC   Q D+A D  
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFL 542

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + M      P   ++ +LI G        +  ELL+++  K +M  +S
Sbjct: 543 VYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSS 590



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 253/498 (50%), Gaps = 11/498 (2%)

Query: 80  NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
           N H+ +  N++ +  ++ + N L     + G +  GF     ++     P+     +LI+
Sbjct: 88  NGHFSS-ANSSFVLEDVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIR 145

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           G     +  +AA +   L+  G  P+VITYN +I+G C+ G    AL++ + M+      
Sbjct: 146 GFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS------ 199

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                P+ VTY+TI+  LC  G + +A  +  +M   +  PDV+TY  LI   C  +   
Sbjct: 200 ---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +A +L  EM D+G  P VVT+NV+++ +CK  ++DEA + L+ M   G +PN  T+N ++
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
              C  G+   AE+L   M   G     V++NILIN  C+   +  A+ +  +M   G +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  ++YN L  G  +  +++ A++  + M   G   D  TY T +  LCK+G + +AVE+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              L    C   +  YN +IDGL K+G+   A +L   +    L P+ +TY+ ++ GL  
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           +G++D+A   F + E     P+ +TF+ ++ G  +  +  +  + L  M  +   P  + 
Sbjct: 497 EGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETS 556

Query: 560 VSIVVDLLVKNEISLKSL 577
            +I+++ L    ++ ++L
Sbjct: 557 YTILIEGLAYEGMAKEAL 574



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 216/418 (51%), Gaps = 11/418 (2%)

Query: 65  PPVSSFNILLASLAKNKHYD---TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           P V ++N++++   K    +   + L+   + P++ TYN ++   C  G++        R
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 122 IL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           +L R C+ P+  T+  LI+    +S + +A  L  +++  GC P+V+TYN L+NG+C+ G
Sbjct: 230 MLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A+    +M +        C+PN +T++ I+  +C  G    A+ L   M  +  +P
Sbjct: 289 RLDEAIKFLNDMPSSG------CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            VVT+N LI+ LC       A  +  +M   G QP+ +++N ++   CK +KMD A   L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + MV RG  P+  TYNT++   C  GK+  A E+   + S GC    ++YN +I+G  K 
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +  +A+ L  EM +K +KP  +TY++L  GL    +V+ A+K F E +R GV  +  T+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTF 522

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            + + GLCK      A++    +    C+    +Y  LI+GL   G  K A EL   L
Sbjct: 523 NSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 208/422 (49%), Gaps = 11/422 (2%)

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           +  N  +  L RTG         E M  +GN        P+ +  +T+I G C+ G   K
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGN-------VPDIIPCTTLIRGFCRMGKTRK 155

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  +   ++     PDV+TYN +I G C A + N A  +   M    V P VVT+N I+ 
Sbjct: 156 AAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR 212

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LC + K+ +A  +LD M+QR   P+  TY  L++  C    + +A +L   M   GC  
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTP 272

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D V+YN+L+NG CK   ++EA+    +M S G +P V+T+N +   +    +   A KL 
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            +M R G +    T+   I+ LC+ G +  A+++   +    C+ +  +YN L+ G CK 
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKE 392

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            ++  A E    +      P++VTYN M+  LC DG+++ A ++   +     +P +IT+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           + +I G  +  +  K  +LL +M+ K + PD    S +V  L +     +++  F   ER
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512

Query: 586 QG 587
            G
Sbjct: 513 MG 514


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/523 (30%), Positives = 266/523 (50%), Gaps = 27/523 (5%)

Query: 65  PPVSSFNILL-----ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V ++N +L     ASL   + +   + + G+ PN+YTYNILI   C  G         
Sbjct: 114 PSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +  +   PN  T+N+L+        +  A  L   +   G +PN++T+N+++NG+C+ 
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A  +F+EM            P+ V+Y+T++ G CK G   +A ++F +M  + I 
Sbjct: 234 GKMEDARKVFDEMMREG------LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PDVVT+ SLIH +C A +   A  L  +M ++G+Q + VTF  ++D  CK   +D+A   
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M Q  ++P+   YN L++G+C++G+++ A EL   ME+ G K D V+Y+ +I+ YCK
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 407

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N +   A  L ++M+ KG+ P  +TY++L   L E  ++  A  LF  M + G+  D  T
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFT 467

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           YT+ IDG CK G +  A+ L   +       D+  Y+ LI+GL KS R   A +L   L 
Sbjct: 468 YTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 527

Query: 480 HGVLVPNVVTYNIM---------------IQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           H   +P    Y+ +               ++G C  G M++A  ++  M +     D   
Sbjct: 528 HEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 587

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDL 566
           + +LIHG  R     K      +M ++   P++ S +S++  L
Sbjct: 588 YSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 166/514 (32%), Positives = 251/514 (48%), Gaps = 16/514 (3%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCF 106
           F   LR+ PS PP   F+ L+ S A                 + G  P++  YN ++   
Sbjct: 68  FLRALRLLPSSPP-RPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLLAL 126

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
                 S     F  +L     PN  T+N LI+ L       EA ++   ++  GC PNV
Sbjct: 127 SDASLTSARRF-FDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNV 185

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TYNTL+    R G    A  L   M +G        KPN VT++++++G+CK G ++ A
Sbjct: 186 VTYNTLVAAFFRAGEVDGAERLVGMMLDGG------LKPNLVTFNSMVNGMCKAGKMEDA 239

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + +F +M  E + PD V+YN+L+ G C A   +EA  +F EM  +G+ P VVTF  ++  
Sbjct: 240 RKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHV 299

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +CK   ++ A  L+  M +RG++ N  T+  L+DGFC  G ++ A      M     K  
Sbjct: 300 MCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPS 359

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V YN LINGYC    ++EA  L  EM +KG+KP VVTY+T+     +      A +L  
Sbjct: 360 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 419

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   GV  D  TY++ I  LC+   + +A  LF+ +  L  + D   Y  LIDG CK G
Sbjct: 420 QMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 479

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            ++ A  L   +    ++P+VVTY+++I GL    +  +A+ L   +      P    +D
Sbjct: 480 NVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYD 539

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            L+H   R  E   V  LL     K +M +A  V
Sbjct: 540 ALMH-CCRKAELKSVLALLKGFCMKGLMNEADKV 572



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 261/552 (47%), Gaps = 51/552 (9%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFC 107
           FD ML      P V ++NIL+ +L    H    L+        G  PN+ TYN L+  F 
Sbjct: 138 FDSMLS-DGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 196

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G V       G +L     PN  TFNS++ G+    ++ +A  +F ++   G  P+ +
Sbjct: 197 RAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGV 256

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANG---------NGEIGVVCKP------------- 205
           +YNTL+ G C+ G +  AL++F EM               I V+CK              
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM 316

Query: 206 -------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                  N VT++ +IDG CK+GF+D A      M+   I P VV YN+LI+G C     
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM 376

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA+ L  EM  +G++P VVT++ I+   CKN     A  L   M+++GV P+A TY++L
Sbjct: 377 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSL 436

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C   +++ A  LF +M  +G + D+ +Y  LI+G+CK   VE ALSL+ +MV  G+
Sbjct: 437 IRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKL---------------FDEMQRDGVAADTRTYTTF 423
            P VVTY+ L  GL +  +   A +L               +D +      A+ ++    
Sbjct: 497 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLAL 556

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G C  G + EA ++++++      LD   Y+ LI G C++G +  A      +     
Sbjct: 557 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGF 616

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN  +   +I+GL  +G + +A  +   +    +  D      LI   +       V +
Sbjct: 617 APNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLD 676

Query: 544 LLHKMKEKKVMP 555
           +LH M +  ++P
Sbjct: 677 VLHGMAKDGLLP 688



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 232/476 (48%), Gaps = 43/476 (9%)

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHA-ESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            + F R LR   +     F+SLIK   +  +R   AAA     ++ G  P+V+ YN ++ 
Sbjct: 65  LVCFLRALRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLL 124

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            L     T  A   F+ M +     GV   PN  TY+ +I  LC  G   +A ++   M+
Sbjct: 125 ALSDASLTS-ARRFFDSMLSD----GVA--PNVYTYNILIRALCGRGHRKEALSILRDMR 177

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                P+VVTYN+L+     A + + A+RL   M+D G++P++VTFN +++ +CK  KM+
Sbjct: 178 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKME 237

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           +A ++ D M++ G+ P+  +YNTL+ G+C  G  + A  +F  M   G   D V++  LI
Sbjct: 238 DARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 297

Query: 355 NGYCKNKEVEEALSLYREMVSKG-----------------------------------IK 379
           +  CK   +E A++L R+M  +G                                   IK
Sbjct: 298 HVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIK 357

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P+VV YN L  G   + +++ A +L  EM+  G+  D  TY+T I   CKN     A EL
Sbjct: 358 PSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFEL 417

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            + +       D   Y+ LI  LC+  RL  A  LF ++    L P+  TY  +I G C 
Sbjct: 418 NQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 477

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           +G +++A  L   M +    PDV+T+ +LI+G  +     +  +LL K+  ++ +P
Sbjct: 478 EGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 84/228 (36%), Gaps = 71/228 (31%)

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P+V+ YN + L L +   +  A + FD M  DGVA +  TY                
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTY---------------- 153

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI---- 492
                              N LI  LC  G  K A  +   +      PNVVTYN     
Sbjct: 154 -------------------NILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAA 194

Query: 493 -------------------------------MIQGLCNDGQMDKARDLFLDMEENAAAPD 521
                                          M+ G+C  G+M+ AR +F +M     APD
Sbjct: 195 FFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPD 254

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++++ L+ G+ +     +   +  +M +K +MPD    + ++ ++ K
Sbjct: 255 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCK 302


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 246/478 (51%), Gaps = 6/478 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   GL PN YTY I+    C+  R++   + F  + ++   P+    ++LI G   E  
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I E   +   + + G   N+ITYN LI+GLC+ G    A  + +      G I + CKPN
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK------GMITLGCKPN 114

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + T+  +I+G C+E  + +A  L  +M+  N+ P  V+Y ++I+GLCH  D + A +L  
Sbjct: 115 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 174

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M   G++P+VV ++ ++       +++EA RLLD M   GV P+   YN ++      G
Sbjct: 175 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 234

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K+  A      ++  G K D V++   I GY K  ++ EA   + EM+  G+ P    Y 
Sbjct: 235 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 294

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G F+   +  AL +F  +   GV  D +T + FI GL KNG + EA+++F  L+  
Sbjct: 295 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  Y+ LI G CK G ++ A+EL   +    + PN+  YN ++ GLC  G + +A
Sbjct: 355 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 414

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           R LF  M E    PD +T+  +I G+ +    ++   L H+M  K V P + + + +V
Sbjct: 415 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472



 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 158/476 (33%), Positives = 248/476 (52%), Gaps = 9/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G+  NL TYN+LI+  CK G++     I  G I   C  PN+ TF  LI+G   E  +  
Sbjct: 75  GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGC-KPNSRTFCLLIEGYCREHNMGR 133

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  +++     P+ ++Y  +INGLC      +A  L E+M           KPN V 
Sbjct: 134 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG------LKPNVVV 187

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YST+I G   EG +++A+ L   M    + PD+  YN++I  L  A    EA    +E+ 
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P  VTF   +    K  KM EA++  D M+  G+ PN   Y  L++G    G + 
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 307

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  +F  + ++G   D  + +  I+G  KN  V+EAL ++ E+  KG+ P V TY++L 
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +VE A +L DEM   G+A +   Y   +DGLCK+G I  A +LF  +     E
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 427

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y+ +IDG CKS  +  A+ LF  +P   + P+   YN ++ G C +G M+KA +L
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           F +M +   A   ++F+ LI G+ +  +  + ++L  +M  K++MPD    + V+D
Sbjct: 488 FREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 542



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 226/445 (50%), Gaps = 6/445 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             PN  T+  +  GL    R+ EA   F +++  G +P+    + LI+G  R G     L
Sbjct: 6   LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 65

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            + + M +    I      N +TY+ +I GLCK G ++KA  +   M      P+  T+ 
Sbjct: 66  RIKDVMVSCGIPI------NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI G C  ++   A  L  EM  + + PS V++  +++ LC  + +  A++LL+ M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G++PN   Y+TL+ G+   G+I  A  L   M   G   D   YN +I+   K  ++EEA
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            +   E+  +G+KP  VT+    LG  +  ++  A K FDEM   G+  +   YT  I+G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
             K G ++EA+ +FR L  L    D+Q  +  I GL K+GR++ A ++F  L    LVP+
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V TY+ +I G C  G+++KA +L  +M     AP++  ++ L+ G  +  +  +  +L  
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNE 571
            M EK + PD+   S ++D   K+E
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSE 444



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 251/508 (49%), Gaps = 32/508 (6%)

Query: 65  PPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N +++ L+K         Y   +   GL P+  T+   I  + K G+++     
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L     PN   +  LI G      +MEA ++F  L A G  P+V T +  I+GL +
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL +F E+     E G+V  P+  TYS++I G CK+G V+KA  L  +M  + I
Sbjct: 338 NGRVQEALKVFSELK----EKGLV--PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++  YN+L+ GLC + D   A++LF  M ++G++P  VT++ ++D  CK+  + EA  
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +GV+P++  YN L+ G C  G + +A  LF  M   G     +S+N LI+GYC
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYC 510

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-------- 410
           K+ +++EA  L++EM++K I P  VTY T+     +  ++E A  LF EMQ         
Sbjct: 511 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 570

Query: 411 ---------DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA-YNCLID 460
                     GV  D  TY   I   CK   ++EA +L R   + K  L     ++ LI 
Sbjct: 571 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL-RDEVVGKGMLTKGTIHDLLIT 629

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            LCK   L  A +L   +    L P++   + +++     G+MD+A  +F  ++     P
Sbjct: 630 ALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 689

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKM 548
           D  T   L++G +   +      L+ ++
Sbjct: 690 DTTTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 171/357 (47%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M ++ + P+  TY  +  GLC A   NEAK  F EM   G++P     + ++D   +   
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +DE  R+ D+MV  G+  N  TYN L+ G C  GK+ +A E+   M ++GCK +  ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI GYC+   +  AL L  EM  + + P+ V+Y  +  GL     +  A KL ++M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +   Y+T I G    G I EA  L   +       DI  YN +I  L K+G+++ A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                +    L P+ VT+   I G    G+M +A   F +M ++   P+   + +LI+G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
            +     +   +   +    V+PD    S  +  L+KN    ++L  F   + +G V
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 357


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/536 (31%), Positives = 270/536 (50%), Gaps = 36/536 (6%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKN----KHYD--TRLNATGLFPNLYTYNILI 103
           A   FD M    PSP  V+ + +L+    KN    K YD  T++    + P ++  N LI
Sbjct: 368 ALEFFDKMNENGPSPNRVT-YAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLI 426

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             F K+         F   + +C   N  T+NSL+  L  E ++ EA  L+ K+   G  
Sbjct: 427 RGFLKVESREEASKLFDEAV-ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLA 485

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P  ++YN++I G CR G+  +A ++F +M      +    KPN +TYS ++DG  K G  
Sbjct: 486 PTKVSYNSMILGHCRQGNLDMAASVFSDM------LDCGLKPNVITYSILMDGYFKNGDT 539

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           + A  +F +M DENI P   TYN  I+GLC     +EA+ +  + +++G  P  +T+N I
Sbjct: 540 EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           MD   K   +  A      M + GV PN  TY TL++GFC     + A ++   M + G 
Sbjct: 600 MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGL 659

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + D  +Y  LI+G+CK +++E A  L+ E++  G+ P  V YN+L  G   ++ +E AL 
Sbjct: 660 ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN 719

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L   M  +G++ D +TYTT IDGL K G ++ A++L+  +       DI  Y  LI+GLC
Sbjct: 720 LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLC 779

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G+L+ A ++   +    + PNV  YN +I G    G + +A  L  +M +    P+  
Sbjct: 780 GKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDT 839

Query: 524 TFDMLIHGFI----------------------RINEPSKVNELLHKMKEKKVMPDA 557
           T+D+LI+G I                      RINE   + +++ K   K + P+A
Sbjct: 840 TYDILINGKIKGGNSALKSLLSLKFKDGKGMKRINEQDSIKKVIEKAVNKYLRPEA 895



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 267/505 (52%), Gaps = 12/505 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG-LHAE 144
           ++N  G  PN  TY +LI   CK G ++  +  + ++      P     NSLI+G L  E
Sbjct: 374 KMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVE 433

Query: 145 SRIMEAAALFTKLKAFGCE-PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           SR  EA+ LF +  A  C+  N+ TYN+L++ LC+ G    A  L+++M +         
Sbjct: 434 SR-EEASKLFDE--AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG------L 484

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P  V+Y+++I G C++G +D A ++F  M D  + P+V+TY+ L+ G     D   A  
Sbjct: 485 APTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFY 544

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F  M+D+ + PS  T+N+ ++ LCK  +  EA  +L   V++G  P   TYN++MDGF 
Sbjct: 545 VFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFI 604

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G ++ A   +  M   G   + ++Y  LING+CKN   + AL +  EM +KG++  + 
Sbjct: 605 KEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIA 664

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y  L  G  +   +E A  LF E+   G++ ++  Y + I G      +  A+ L + +
Sbjct: 665 AYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRM 724

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+Q Y  LIDGL K GRL  A +L+  +    ++P+++ Y ++I GLC  GQ+
Sbjct: 725 LGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQL 784

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           + A+ +  +ME ++  P+V  ++ LI G  +     +   L ++M +K + P+ +   I+
Sbjct: 785 ENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844

Query: 564 VDLLVKNEIS-LKSLPSFLVQERQG 587
           ++  +K   S LKSL S   ++ +G
Sbjct: 845 INGKIKGGNSALKSLLSLKFKDGKG 869



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 245/504 (48%), Gaps = 40/504 (7%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            Y+I+I  FCK   V L       +    + P+  TF S+I     +  ++EA  L  ++
Sbjct: 281 AYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEM 340

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
            + G + NV+   TL+ G C+    + AL  F++M N NG       PN VTY+ +I+  
Sbjct: 341 VSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM-NENGP-----SPNRVTYAVLIEWC 394

Query: 218 CKEGFVDKAKALFLQMKDENINP----------------------------------DVV 243
           CK G + KA  L+ QMK++NI P                                  ++ 
Sbjct: 395 CKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIF 454

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYNSL+  LC     +EA  L+ +M+D+G+ P+ V++N ++   C+   +D A+ +   M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +  G++PN  TY+ LMDG+   G    A  +F  M        D +YNI ING CK    
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            EA  + ++ V KG  P  +TYN++  G  +   V  AL  + EM   GV+ +  TYTT 
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+G CKN     A+++   +R    ELDI AY  LIDG CK   ++ A  LF  L  G L
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN V YN +I G  N   M+ A +L   M     + D+ T+  LI G ++        +
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754

Query: 544 LLHKMKEKKVMPDASIVSIVVDLL 567
           L  +M  K ++PD  I +++++ L
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGL 778



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 211/478 (44%), Gaps = 48/478 (10%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++  YN L+N + K  +++     F R++ S   P     N L+  L     I EA  ++
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            K+   G           ++G C T H M+  NL                          
Sbjct: 233 EKMVLKG-----------VHGDCFTVHIMMRANL-------------------------- 255

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
               K+   ++AK  FL+ K   +  D   Y+ +I   C   D   A  L  +M D+G  
Sbjct: 256 ----KDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWV 311

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           PS  TF  ++    K   M EA RL D MV  GV+ N     TL+ G+C   K+  A E 
Sbjct: 312 PSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEF 371

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   G   + V+Y +LI   CKN  + +A  LY +M +K I PTV   N+L  G  +
Sbjct: 372 FDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLK 431

Query: 395 IHQVEHALKLFDEMQRDGVAADTR---TYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           +   E A KLFDE     VA D     TY + +  LCK G + EA  L++ +        
Sbjct: 432 VESREEASKLFDE----AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPT 487

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             +YN +I G C+ G L  A  +F  +    L PNV+TY+I++ G   +G  + A  +F 
Sbjct: 488 KVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFD 547

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            M +    P   T+++ I+G  ++   S+  ++L K  EK  +P     + ++D  +K
Sbjct: 548 RMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIK 605



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 112/261 (42%), Gaps = 8/261 (3%)

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY----NILINGYCKNKEVEEALSLY 370
           YN L++ +    K+N A   F  +     + D V +    N L+    KN  + EA  +Y
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRL----VESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            +MV KG+     T + +     + +  E A K F E +  GV  D   Y+  I   CKN
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             +  A  L + +R          +  +I    K G +  A  L   +    +  NVV  
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             +++G C   ++  A + F  M EN  +P+ +T+ +LI    +    +K  +L  +MK 
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412

Query: 551 KKVMPDASIVSIVVDLLVKNE 571
           K + P   IV+ ++   +K E
Sbjct: 413 KNICPTVFIVNSLIRGFLKVE 433



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 104/286 (36%), Gaps = 70/286 (24%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGY-----------CKNKEVE---------------- 364
           +   GS +      D   YN L+N Y           C N+ VE                
Sbjct: 159 DHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTA 218

Query: 365 --------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
                   EA  +Y +MV KG+     T + +     + +  E A K F E +  GV  D
Sbjct: 219 LVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLD 278

Query: 417 TRTYTTFIDGLCKN-----------------------------------GYIIEAVELFR 441
              Y+  I   CKN                                   G ++EA+ L  
Sbjct: 279 AAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKD 338

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     ++++     L+ G CK  +L  A E F  +      PN VTY ++I+  C +G
Sbjct: 339 EMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNG 398

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            M KA DL+  M+     P V   + LI GF+++    + ++L  +
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/498 (32%), Positives = 256/498 (51%), Gaps = 13/498 (2%)

Query: 67  VSSFNILLASLAKN---KHYDTRLNAT---GLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           +S+FN LL  L K    K  +  L+     G+ PNL+TYN+ I   C+ G +       G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++     P+  T+N+LI GL   S+  EA     K+   G EP+  TYNTLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
              +A  +  + A  NG +     P+  TY ++IDGLC EG  ++A ALF +   + I P
Sbjct: 336 MVQLAERIVGD-AVFNGFV-----PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +V+ YN+LI GL +     EA +L  EM ++G+ P V TFN++++ LCK   + +A  L+
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
            +M+ +G  P+  T+N L+ G+    K+  A E+   M   G   D  +YN L+NG CK 
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            + E+ +  Y+ MV KG  P + T+N L   L    +++ AL L +EM+   V  D  T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569

Query: 421 TTFIDGLCKNGYIIEAVELFRTLR-ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
            T IDG CKNG +  A  LFR +    K       YN +I    +   +  A +LF  + 
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              L P+  TY +M+ G C  G ++      L+M EN   P + T   +I+     +   
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689

Query: 540 KVNELLHKMKEKKVMPDA 557
           +   ++H+M +K ++P+A
Sbjct: 690 EAAGIIHRMVQKGLVPEA 707



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 235/477 (49%), Gaps = 6/477 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P +++YN +++     G        + R+     TP+  +F   +K     SR   A  L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              + + GCE NV+ Y T++ G            LF +M      + +       T++ +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS------TFNKL 222

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +  LCK+G V + + L  ++    + P++ TYN  I GLC   + + A R+   +++QG 
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P V+T+N ++  LCKN K  EA   L  MV  G+ P++ TYNTL+ G+C  G +  AE 
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           + G     G   D  +Y  LI+G C   E   AL+L+ E + KGIKP V+ YNTL  GL 
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
               +  A +L +EM   G+  + +T+   ++GLCK G + +A  L + +       DI 
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LI G     +++ A E+   +    + P+V TYN ++ GLC   + +   + +  M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            E   AP++ TF++L+    R  +  +   LL +MK K V PDA     ++D   KN
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 156/564 (27%), Positives = 269/564 (47%), Gaps = 49/564 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            EA  +F+ M   +   P V S+N +++ L  + ++D       R+   G+ P++Y++ I
Sbjct: 93  QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +  FCK  R          +       N   + +++ G + E+   E   LF K+ A G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
               + T+N L+  LC+ G       L +++     + GV+  PN  TY+  I GLC+ G
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI----KRGVL--PNLFTYNLFIQGLCQRG 265

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  +   + ++   PDV+TYN+LI+GLC  + + EA+    +M+++G++P   T+N
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   CK   +  A R++   V  G  P+  TY +L+DG C  G+ NRA  LF      
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 342 GCKHDDVSY-----------------------------------NILINGYCKNKEVEEA 366
           G K + + Y                                   NIL+NG CK   V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L + M+SKG  P + T+N L  G     ++E+AL++ D M  +GV  D  TY + ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK     + +E ++T+    C  ++  +N L++ LC+  +L  A  L   + +  + P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEEN-AAAPDVITFDMLIHGFIRINEPSKVNELL 545
            VT+  +I G C +G +D A  LF  MEE    +    T++++IH F      +   +L 
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 546 HKMKEKKVMPDASIVSIVVDLLVK 569
            +M ++ + PD     ++VD   K
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCK 649



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 217/483 (44%), Gaps = 91/483 (18%)

Query: 65  PPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L KN        Y  ++   GL P+ YTYN LI  +CK G V L    
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G  + + F P+  T+ SLI GL  E     A ALF +    G +PNVI YNTLI GL  
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF-------- 230
            G  + A  L  EM+    E G++  P   T++ +++GLCK G V  A  L         
Sbjct: 404 QGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457

Query: 231 ---------------LQMKDEN------------INPDVVTYNSLIHGLCHANDWNEAKR 263
                           Q+K EN            ++PDV TYNSL++GLC  + + +   
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
            +  M+++G  P++ TFN++++ LC+ RK+DEA  LL+ M  + V P+A T+ TL+DGFC
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577

Query: 324 LMGKINRAEELFGSME-------------------------SMGCK-----------HDD 347
             G ++ A  LF  ME                         +M  K            D 
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            +Y ++++G+CK   V        EM+  G  P++ T   +   L    +V  A  +   
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697

Query: 408 MQRDGVAADTRTYTTFIDGLCK-NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           M + G+  +       ++ +C  +   + A +L     + K  +   AY  L DGL +  
Sbjct: 698 MVQKGLVPEA------VNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL-RDK 750

Query: 467 RLK 469
           RL+
Sbjct: 751 RLR 753



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 204/459 (44%), Gaps = 53/459 (11%)

Query: 148 MEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           M+A  +F  + K  G +  + TY ++I  L   G        FE M     E+ V  + N
Sbjct: 21  MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGK-------FEAME----EVLVDMREN 69

Query: 207 TV------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
                    Y   +    ++G V +A  +F +M   +  P V +YN+++  L  +  +++
Sbjct: 70  VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A ++++ M D+G+ P V +F + M   CK  +   A RLL+ M  +G   N   Y T++ 
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189

Query: 321 GFCLMGKINRAEELFGSMESMG---------------CKHDDV----------------- 348
           GF          ELFG M + G               CK  DV                 
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249

Query: 349 ---SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
              +YN+ I G C+  E++ A+ +   ++ +G KP V+TYN L  GL +  + + A    
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            +M  +G+  D+ TY T I G CK G +  A  +           D   Y  LIDGLC  
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G    A  LF       + PNV+ YN +I+GL N G + +A  L  +M E    P+V TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++L++G  ++   S  + L+  M  K   PD    +I++
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 163/343 (47%), Gaps = 14/343 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNI 101
           N A  +F+  L      P V  +N L+  L+              ++  GL P + T+NI
Sbjct: 373 NRALALFNEALG-KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N  CK+G VS        ++   + P+  TFN LI G   + ++  A  +   +   G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+V TYN+L+NGLC+T      +  ++ M          C PN  T++ +++ LC+  
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYR 545

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTF 280
            +D+A  L  +MK++++NPD VT+ +LI G C   D + A  LF +M +   V  S  T+
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N+I+    +   +  A +L   MV R + P+  TY  ++DGFC  G +N   +    M  
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            G      +   +IN  C    V EA  +   MV KG+ P  V
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 249/468 (53%), Gaps = 8/468 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIME 149
           G+ P + TYN +++ FCK G V        ++  R C+ P+  TFN LI GL  +  + +
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQ 290

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  ++   G   +  TYN LI G C+ G  + AL L+EEM       GV   P   +
Sbjct: 291 AKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTR----GV--SPTVAS 344

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++TI+ G CKEG +  A+     M  +N+ PD+++YN+LI+G C   +  EA  L  E+ 
Sbjct: 345 HNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELR 404

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            + +  ++VT+N ++D LC+   ++ A +L + M+ RG+ P+  TY  L++G C +G + 
Sbjct: 405 FRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNML 464

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A+E F  M  +G   D  +Y   I G  K  +  +A  L  EM++KG  P V+TYN   
Sbjct: 465 MAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFV 524

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL ++  +E A +L  +M RDG   D  TYT+F+    +NG++ E  E+F  +      
Sbjct: 525 NGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQT 584

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  Y  LI     +GRL +A   F  +    +VPNV+TYN++I G C   +MD+A   
Sbjct: 585 PTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKF 644

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           F++M+E    P+  T+ +LI+    + +  +   L  +M  K++ PD+
Sbjct: 645 FIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 247/485 (50%), Gaps = 41/485 (8%)

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
            + F +++R+ F P+    N ++K L  ++ +++A  ++  +  +G  P V TYNT+++ 
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C+ G    AL+L  +M          C P+ VT++ +I+GL K+G + +AK L  +M  
Sbjct: 247 FCKGGEVQRALDLVPKMQERG------CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAK 300

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             +     TYN LI G C      EA  L+ EM+ +GV P+V + N IM   CK  KM +
Sbjct: 301 AGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSD 360

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A + L  M+++ + P+  +YNTL+ GFC +G I  A  L   +       + V+YN LI+
Sbjct: 361 ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLID 420

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G C+  ++E AL L  +M+++GI P VVTY  L  G  ++  +  A + FDEM   G+A 
Sbjct: 421 GLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAP 480

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL- 474
           D   YT  I G  K G   +A +L   +       D+  YN  ++GLCK G L+ A EL 
Sbjct: 481 DQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELL 540

Query: 475 --------------FCSLPHGVL--------------------VPNVVTYNIMIQGLCND 500
                         + S  H  +                     P VVTY ++I     +
Sbjct: 541 QKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALN 600

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++D A   FL+M+E    P+VIT+++LI+GF ++ +  +  +   +M+EK + P+    
Sbjct: 601 GRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY 660

Query: 561 SIVVD 565
           +I+++
Sbjct: 661 TILIN 665



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 225/471 (47%), Gaps = 12/471 (2%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V+++N +L S  K            ++   G +P+  T+N+LIN   K G +      
Sbjct: 235 PTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGL 294

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + ++    +  T+N LI G   +  ++EA AL+ ++   G  P V ++NT++ G C+
Sbjct: 295 IQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCK 354

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A     +M   N        P+ ++Y+T+I G C+ G + +A  L  +++  N+
Sbjct: 355 EGKMSDARQQLSDMLKKN------LMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNL 408

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + ++VTYN+LI GLC   D   A +L  +M+++G+ P VVT+ V+++  CK   M  A  
Sbjct: 409 SFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKE 468

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D M+  G+ P+   Y   + G   +G   +A +L   M + G   D ++YN+ +NG C
Sbjct: 469 FFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLC 528

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +EEA  L ++M+  G  P  VTY +      E   +    ++F +M   G      
Sbjct: 529 KLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVV 588

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I     NG +  A+  F  ++      ++  YN LI+G CK  ++  A + F  +
Sbjct: 589 TYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEM 648

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
               + PN  TY I+I   CN G+  +A  L+  M      PD  T   L+
Sbjct: 649 QEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALL 699



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 203/398 (51%), Gaps = 10/398 (2%)

Query: 72  ILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           +L+ +LA  +   TR    G+ P + ++N ++  FCK G++S        +L+    P+ 
Sbjct: 322 LLVEALALWEEMVTR----GVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDI 377

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            ++N+LI G      I EA  L  +L+      N++TYNTLI+GLCR G    AL L E+
Sbjct: 378 ISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKED 437

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M N          P+ VTY+ +++G CK G +  AK  F +M    + PD   Y + I G
Sbjct: 438 MINRG------IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG 491

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
                D  +A +L  EM+ +G  P V+T+NV ++ LCK   ++EA  LL  M++ G  P+
Sbjct: 492 ELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPD 551

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TY + M      G +    E+F  M S G     V+Y +LI+ +  N  ++ A++ + 
Sbjct: 552 HVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFL 611

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           EM  KG+ P V+TYN L  G  ++ +++ A K F EMQ  G+  +  TYT  I+  C  G
Sbjct: 612 EMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMG 671

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
              EA+ L+  +   +   D   +  L+  L K  +++
Sbjct: 672 KWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ 709



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 179/341 (52%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F +M      PDV   N ++  L   N   +A  ++  M + G++P+V T+N ++   C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K  ++  A  L+  M +RG  P+  T+N L++G    G++ +A+ L   M   G +    
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LI GYCK   + EAL+L+ EMV++G+ PTV ++NT+  G  +  ++  A +   +M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            +  +  D  +Y T I G C+ G I EA  L   LR      +I  YN LIDGLC+ G L
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           + A +L   + +  + P+VVTY +++ G C  G M  A++ F +M     APD   +   
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           I G +++ + +K  +L  +M  K   PD    ++ V+ L K
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASL-----AKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
           FD ML +  +P   +    ++  L     AK       +   G  P++ TYN+ +N  CK
Sbjct: 470 FDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           +G +        +++R    P+  T+ S +        + E   +F  + + G  P V+T
Sbjct: 530 LGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           Y  LI+     G    A+  F EM     E GVV  PN +TY+ +I+G CK   +D+A  
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQ----EKGVV--PNVITYNVLINGFCKVRKMDQACK 643

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
            F++M+++ I P+  TY  LI+  C+   W EA RL+ +M+ + ++P   T   ++ +L 
Sbjct: 644 FFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLD 703

Query: 289 KNRKMDEASRLLDLMVQRGVR 309
           K+ K+ +A + ++ ++  G R
Sbjct: 704 KDYKV-QAVQFIESLILDGDR 723



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 10/234 (4%)

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           CLM       E   S E  G        ++LI GY       + L ++ +M+     P V
Sbjct: 153 CLMKSAYWVMERIISFEMYGI------VDVLIGGYLN----YQCLLVFEKMMRNRFLPDV 202

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
              N +   L + + +  AL+++  M   G+     TY T +   CK G +  A++L   
Sbjct: 203 KNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPK 262

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           ++   C      +N LI+GL K G L+ A  L   +    L  +  TYN +I G C  G 
Sbjct: 263 MQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGL 322

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           + +A  L+ +M     +P V + + +++GF +  + S   + L  M +K +MPD
Sbjct: 323 LVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPD 376


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 250/484 (51%), Gaps = 6/484 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI    + G        + R++     P+  T+++L+  L    
Sbjct: 182 KMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR 241

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
                  L  +++  G  PN+ TY   I  L R G    A  + + M +        C P
Sbjct: 242 DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG------CGP 295

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC  G +DKAK L+ +M+  +  PD+VTY +L+    +  D    KR +
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P VVT+ ++++ LCK+ K+D+A  +LD+M  RG+ PN  TYNTL+ G   +
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL 415

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A ELF +MES+G      SY + I+ Y K  + E+AL  + +M  +GI P++   
Sbjct: 416 RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAAC 475

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L E+ ++  A  +F+++   G++ D+ TY   +    K G I +A +L   +  
Sbjct: 476 NASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS 535

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             CE DI   N LID L K+GR+  AW++F  L    L P VVTYNI+I GL  +G++ K
Sbjct: 536 EGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLK 595

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A DLF  M+E+   P+ +TF+ L+    + +      ++  +M      PD    + ++ 
Sbjct: 596 ALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIY 655

Query: 566 LLVK 569
            L+K
Sbjct: 656 GLIK 659



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 162/549 (29%), Positives = 265/549 (48%), Gaps = 27/549 (4%)

Query: 30  VHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK------NKHY 83
           V F D   + GD     P +A   F+ M +     P +++ N  L SLA+       K  
Sbjct: 441 VLFIDYYGKLGD-----PEKALDTFEKM-KKRGIMPSIAACNASLYSLAEMGRIREAKDI 494

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
              ++  GL P+  TYN+++ C+ K G++         +L     P+    NSLI  L+ 
Sbjct: 495 FNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYK 554

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
             R+ EA  +F +LK     P V+TYN LI GL + G  + AL+LF  M          C
Sbjct: 555 AGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG------C 608

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PNTVT++ ++D LCK   VD A  +F +M   N +PDV+TYN++I+GL        A  
Sbjct: 609 PPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYA-F 667

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGF 322
            F   M + + P  VT   ++  + K+ ++++A ++ ++ + Q G++ +   +  LM+  
Sbjct: 668 WFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECI 727

Query: 323 CLMGKINRAEELFGSMESMGCK---HDDVSYNILINGYCKNKEVEEALSLYREMV-SKGI 378
            +  +I   EE     E + C     DD     LI   CK K+  +A  L+ +   S G 
Sbjct: 728 LIEAEI---EEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGT 784

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            PT  +YN L  GL   +  E ALKLF EM+  G   +  TY   +D   K+  I E  E
Sbjct: 785 HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFE 844

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L+  +    C+ +I  +N +I  L KS  +  A +L+  +  G   P   TY  +I GL 
Sbjct: 845 LYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLL 904

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G+ ++A  +F +M +    P+   +++LI+GF +    +   +L  +M ++ + PD  
Sbjct: 905 KAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLK 964

Query: 559 IVSIVVDLL 567
             +I+V+ L
Sbjct: 965 SYTILVECL 973



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 260/550 (47%), Gaps = 43/550 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN----KHYD--TRLNATGLFPNLYTYNI 101
            +EA+ +F  +  +  +P  V ++NIL+  L K     K  D    +  +G  PN  T+N 
Sbjct: 559  DEAWQMFGRLKDLKLAPT-VVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNA 617

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            L++C CK   V L    F R+     +P+  T+N++I GL  E R   A   + ++K F 
Sbjct: 618  LLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF- 676

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------------EI--- 199
              P+ +T  TL+ G+ + G    A+ +  E  + +G                   EI   
Sbjct: 677  LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEA 736

Query: 200  -----GVVCKPNTVTYS-----TIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSL 248
                 G+VC  N++         +I  LCK+     AK LF +  K    +P   +YN L
Sbjct: 737  ISFAEGLVC--NSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCL 794

Query: 249  IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
            + GL   N    A +LF+EM + G  P++ T+N+++D   K++++DE   L + M+ RG 
Sbjct: 795  MDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGC 854

Query: 309  RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            +PN  T+N ++        IN+A +L+  + S        +Y  LI G  K    EEA+ 
Sbjct: 855  KPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMK 914

Query: 369  LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
            ++ EM     KP    YN L  G  +   V  A  LF  M ++G+  D ++YT  ++ L 
Sbjct: 915  IFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLF 974

Query: 429  KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
              G + +AV  F  L++   + D  +YN +I+GL KS RL+ A  LF  + +  + P + 
Sbjct: 975  MTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELY 1034

Query: 489  TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            TYN +I    N G +D+A  +F +++     P+V T++ LI G  +     +   +  KM
Sbjct: 1035 TYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094

Query: 549  KEKKVMPDAS 558
                  P+A 
Sbjct: 1095 MIVGCSPNAG 1104



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 14/503 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA--FGRILRSCFTPNAATFNSLIKGLHA 143
           R+ + GL P++ TY+ L+    +  R   G I      +      PN  T+   I+ L  
Sbjct: 217 RMISEGLKPSMKTYSALMVALGR--RRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGR 274

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
             RI +A  +   ++  GC P+V+TY  LI+ LC  G    A  L+ +M   +       
Sbjct: 275 AGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH------ 328

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           KP+ VTY T++      G ++  K  + +M+ +   PDVVTY  L+  LC +   ++A  
Sbjct: 329 KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFD 388

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +   M  +G+ P++ T+N ++  L   R++DEA  L + M   GV P A +Y   +D + 
Sbjct: 389 MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYG 448

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +G   +A + F  M+  G      + N  +    +   + EA  ++ ++ + G+ P  V
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSV 508

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN +     +  Q++ A KL  EM  +G   D     + ID L K G + EA ++F  L
Sbjct: 509 TYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL 568

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           + LK    +  YN LI GL K G+L  A +LF S+      PN VT+N ++  LC +  +
Sbjct: 569 KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A  +F  M     +PDV+T++ +I+G I+           H+MK K + PD   +  +
Sbjct: 629 DLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTL 687

Query: 564 VDLLVKN---EISLKSLPSFLVQ 583
           +  +VK+   E ++K +  F+ Q
Sbjct: 688 LPGVVKDGRVEDAIKIVMEFVHQ 710



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 228/478 (47%), Gaps = 6/478 (1%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           GRV      F  + +     N  T+ ++ K L  +  I +A     K++  G   N  +Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N LI  L + G    AL +++ M      I    KP+  TYS ++  L +         L
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRM------ISEGLKPSMKTYSALMVALGRRRDTGTIMDL 249

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+   + P++ TY   I  L  A   ++A  +   M D+G  P VVT+ V++D LC 
Sbjct: 250 LEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCA 309

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             K+D+A  L   M     +P+  TY TLM  F   G +   +  +  ME+ G   D V+
Sbjct: 310 AGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVT 369

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y IL+   CK+ +V++A  +   M  +GI P + TYNTL  GL  + +++ AL+LF+ M+
Sbjct: 370 YTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             GVA    +Y  FID   K G   +A++ F  ++       I A N  +  L + GR++
Sbjct: 430 SLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIR 489

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A ++F  + +  L P+ VTYN+M++     GQ+DKA  L  +M      PD+I  + LI
Sbjct: 490 EAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLI 549

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               +     +  ++  ++K+ K+ P     +I++  L K    LK+L  F   +  G
Sbjct: 550 DTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 253/566 (44%), Gaps = 67/566 (11%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K + + + A G  P++ TY IL+   CK G+V   F     +      PN  T+N+LI G
Sbjct: 352 KRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISG 411

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---- 196
           L    R+ EA  LF  +++ G  P   +Y   I+   + G    AL+ FE+M        
Sbjct: 412 LLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS 471

Query: 197 -----------GEIGVV--------------CKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
                       E+G +                P++VTY+ ++    K G +DKA  L  
Sbjct: 472 IAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLT 531

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M  E   PD++  NSLI  L  A   +EA ++F  + D  + P+VVT+N+++  L K  
Sbjct: 532 EMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEG 591

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+ +A  L   M + G  PN  T+N L+D  C    ++ A ++F  M  M C  D ++YN
Sbjct: 592 KLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYN 651

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE-MQR 410
            +I G  K      A   Y +M  K + P  VT  TL  G+ +  +VE A+K+  E + +
Sbjct: 652 TIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQ 710

Query: 411 DGVAADTRTY----------------TTFIDGL-------------------CKNGYIIE 435
            G+    + +                 +F +GL                   CK    ++
Sbjct: 711 SGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALD 770

Query: 436 AVELF-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           A +LF +  + L      ++YNCL+DGL      + A +LF  + +    PN+ TYN+++
Sbjct: 771 AKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLL 830

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
                  ++D+  +L+ +M      P++IT +++I   ++ N  +K  +L +++      
Sbjct: 831 DAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFS 890

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSF 580
           P       ++  L+K   S +++  F
Sbjct: 891 PTPCTYGPLIGGLLKAGRSEEAMKIF 916



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 232/508 (45%), Gaps = 50/508 (9%)

Query: 64   PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
            PP   +FN LL  L KN   D       R+      P++ TYN +I    K GR    F 
Sbjct: 609  PPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAF- 667

Query: 118  AFGRILRSCFTPNAATFNSLIKGLHAESRIMEA----------AALFTKLKAFG------ 161
             F   ++   +P+  T  +L+ G+  + R+ +A          + L T  + +G      
Sbjct: 668  WFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECI 727

Query: 162  ---------------------CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
                                 C+ + +    LI  LC+    + A  LF++     G   
Sbjct: 728  LIEAEIEEAISFAEGLVCNSICQDDNLIL-PLIRVLCKQKKALDAKKLFDKFTKSLGT-- 784

Query: 201  VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
                P   +Y+ ++DGL      + A  LF++MK+    P++ TYN L+     +   +E
Sbjct: 785  ---HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDE 841

Query: 261  AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
               L+ EM+ +G +P+++T N+I+  L K+  +++A  L   ++     P  CTY  L+ 
Sbjct: 842  LFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIG 901

Query: 321  GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            G    G+   A ++F  M    CK +   YNILING+ K   V  A  L++ M+ +GI+P
Sbjct: 902  GLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRP 961

Query: 381  TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             + +Y  L   LF   +V+ A+  F+E++  G+  DT +Y   I+GL K+  + EA+ LF
Sbjct: 962  DLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLF 1021

Query: 441  RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
              ++      ++  YN LI     +G +  A ++F  L    L PNV TYN +I+G    
Sbjct: 1022 SEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKS 1081

Query: 501  GQMDKARDLFLDMEENAAAPDVITFDML 528
            G  D+A  +F  M     +P+  TF  L
Sbjct: 1082 GNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 6/123 (4%)

Query: 58   LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
            L++    P   S+N+++  L K++  +      + +   G+ P LYTYN LI  F   G 
Sbjct: 989  LKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048

Query: 112  VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            V      F  +      PN  T+N+LI+G         A ++F K+   GC PN  T+  
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQ 1108

Query: 172  LIN 174
            L N
Sbjct: 1109 LPN 1111


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/549 (30%), Positives = 274/549 (49%), Gaps = 50/549 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++++++  L K+K  D       ++   G  PN  TYN LI+ +   G  +     
Sbjct: 202 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 261

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT------- 171
           F ++      P     NS I  L    R  EA  +F  +   G +P++I+Y+T       
Sbjct: 262 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 321

Query: 172 ------------------------------LINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                                         LIN   R G    A+ +FE+M N     G+
Sbjct: 322 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GM 377

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +  P+TVT++T+I  LC+ G +D A   F  M D  + P    Y  LI G C+  +  +A
Sbjct: 378 I--PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 435

Query: 262 KRLFIEMMDQGVQP-SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           K L  EMM++ + P  V  F+ I++ LCK  ++ E   ++D+MVQ G RPN  T+N+LM+
Sbjct: 436 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 495

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+CL+G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KP
Sbjct: 496 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 555

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           T V Y+ +  GLF+  +   A K+F EM   G      TY   + GLC+N    EA  L 
Sbjct: 556 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 615

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             L  +  + DI  +N +I  + K GR + A ELF ++    LVPN+ TY++MI  L  +
Sbjct: 616 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 675

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
              ++A +LF+ +E++  A D    + ++   +   E +K +  L  + E  +  +AS +
Sbjct: 676 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTI 735

Query: 561 SIVVDLLVK 569
           S++  L  +
Sbjct: 736 SLLASLFSR 744



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 250/515 (48%), Gaps = 45/515 (8%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P ++TYNILI+C+ ++ R  LG    GR+L++   P+  ++ SLI G   +  + +A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F ++   G  P ++  N++I  LC+      A ++ ++M +          P+  TYS I
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLI 210

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGLCK   +DKA+ +  QM +    P+ +TYNSLIHG   +  WNE+ R+F +M   GV
Sbjct: 211 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 270

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK--INRA 331
            P+V   N  +  L K+ + +EA  + D MV +G +P+  +Y+T++ G+       +   
Sbjct: 271 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 330

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +F  M + G   +   +NILIN Y +   +++A+ ++ +M +KG+ P  VT+ T+   
Sbjct: 331 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 390

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-------- 443
           L  I +++ AL  F+ M   GV      Y   I G C +G +++A EL   +        
Sbjct: 391 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 450

Query: 444 ----------------RILKCE------------LDIQAYNCLIDGLCKSGRLKFAWELF 475
                           R+ + +             ++  +N L++G C  G ++ A+ L 
Sbjct: 451 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 510

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++    + PN   Y  ++ G C +G++D A  +F DM      P  + + +++HG  + 
Sbjct: 511 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 570

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              +   ++ H+M E           +V+  L +N
Sbjct: 571 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 605



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 257/551 (46%), Gaps = 51/551 (9%)

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           SPP + ++NIL+    +    D       RL   GL P+ ++Y+ LI  F K G V    
Sbjct: 96  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 154

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  ++     P     NS+IK L     + +A ++  K+   G  P++ TY+ +I+GL
Sbjct: 155 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 214

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG-------------------- 216
           C++     A  + E+M     E G   +PN++TY+++I G                    
Sbjct: 215 CKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 268

Query: 217 ---------------LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND--WN 259
                          L K G  ++AK +F  M  +   PD+++Y++++HG   A D    
Sbjct: 269 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 328

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +   +F  M+ +G+ P+   FN++++   +   MD+A  + + M  +G+ P+  T+ T++
Sbjct: 329 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 388

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
              C +G+++ A   F  M  +G    +  Y  LI G C + E+ +A  L  EM++K I 
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 448

Query: 380 PTVVTY-NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           P  V Y +++   L +  +V     + D M + G   +  T+ + ++G C  G + EA  
Sbjct: 449 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 508

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   +  +  E +   Y  L+DG CK+GR+  A  +F  + H  + P  V Y+I++ GL 
Sbjct: 509 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 568

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
              +   A+ +F +M E+     + T+ +++ G  R N   + N LL K+    V  D  
Sbjct: 569 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 628

Query: 559 IVSIVVDLLVK 569
             +IV+  + K
Sbjct: 629 TFNIVISAMFK 639



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 191/426 (44%), Gaps = 37/426 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILL-------ASLAKNKHYDTRLNATGLFPNLYTYN 100
           NEA CIFD M+   P P  +S   +L        + LA   +    +   G+ PN + +N
Sbjct: 291 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 350

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILIN + + G +    + F  +      P+  TF ++I  L    R+ +A   F  +   
Sbjct: 351 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN----------GEIGVVCK------ 204
           G  P+   Y  LI G C  G  + A  L  EM N +            I  +CK      
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 470

Query: 205 --------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
                         PN VT++++++G C  G +++A AL   M    I P+   Y +L+ 
Sbjct: 471 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 530

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G C     ++A  +F +M+ +GV+P+ V +++I+  L + R+   A ++   M++ G   
Sbjct: 531 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 590

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  TY  ++ G C     + A  L   + +M  K D +++NI+I+   K    +EA  L+
Sbjct: 591 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 650

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             + + G+ P + TY+ +   L +    E A  LF  +++ G A+D+R     +  L   
Sbjct: 651 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 710

Query: 431 GYIIEA 436
             + +A
Sbjct: 711 AEVAKA 716



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN LID   +  R      +   L    L P+  +Y+ +I G   DG++DKA  LFL
Sbjct: 100 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 158

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +M E    P ++  + +I    ++ E  K   ++ KM +  + PD    S+++D L K++
Sbjct: 159 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 218


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/499 (32%), Positives = 244/499 (48%), Gaps = 13/499 (2%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S N LL   AK       K +   +   G  P ++TYNI+I+C  K G +      
Sbjct: 96  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P+  T+NS+I G     R+ +    F ++K+  CEP+VITYN+LIN  C+
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G     L  + EM           KPN V+YST++D  CKE  + +A   ++ M+    
Sbjct: 216 SGKLPKGLEFYREMKQSG------LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  TY SL+   C   + ++A RL  EM++ GV+ +VVT+  ++D LC   +M EA +
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEK 329

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   MV  GV PN  +YN L+ GF     ++RA EL   ++  G + D + Y   I G C
Sbjct: 330 LFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC 389

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             +++E A  +  EM   GIK   + Y TL    F+       L L +EMQ         
Sbjct: 390 GLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVV 449

Query: 419 TYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
           T+   IDGLCKN  + +A++ F R       + +   Y  +IDGLCK  ++K A  LF  
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQ 509

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    LVP+   Y  ++ G    G M +A  L   M E     D++ +  L+ GF + N+
Sbjct: 510 MAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQ 569

Query: 538 PSKVNELLHKMKEKKVMPD 556
             K    L +M  ++++PD
Sbjct: 570 LQKARSFLEEMIGEEILPD 588



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 241/460 (52%), Gaps = 7/460 (1%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +FP   + N L++ F K+G+       F  ++ +   P   T+N +I  +  E  I  A 
Sbjct: 94  VFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAAR 153

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            LF ++K  G  P+ +TYN++I+G  + G     +  FEEM +      + C+P+ +TY+
Sbjct: 154 GLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS------MSCEPDVITYN 207

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           ++I+  CK G + K    + +MK   + P+VV+Y++L+   C  +   +A + +++M   
Sbjct: 208 SLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRV 267

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P+  T+  ++D  CK   + +A RL + M++ GV  N  TY  L+DG C   ++  A
Sbjct: 268 GHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEA 327

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E+LFG M + G   +  SYN LI+G+ K K ++ AL L  E+  +GI+P ++ Y T   G
Sbjct: 328 EKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWG 387

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L  + ++E A  + +EMQ +G+ A+T  YTT +D   K+G   E + L   ++ L  E+ 
Sbjct: 388 LCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVT 447

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +  +  LIDGLCK+  +  A + F  + +   L PN   Y  MI GLC + Q+  A  LF
Sbjct: 448 VVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLF 507

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             M +    PD   +  L+ G ++     +   L  KM E
Sbjct: 508 EQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAE 547



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 198/369 (53%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC P    +  +   L   G +++A   F +MK   + P   + N L+H        +  
Sbjct: 58  VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           KR F +M+  G +P+V T+N+++D + K   ++ A  L + M  RG+ P+  TYN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G+++     F  M+SM C+ D ++YN LIN +CK+ ++ + L  YREM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VV+Y+TL     +   ++ A+K + +M+R G   +  TYT+ +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +  +  E ++  Y  LIDGLC + R+K A +LF  +    ++PN+ +YN +I G     
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            MD+A +L  +++     PD++ +   I G   + +      ++++M+E  +  +  I +
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417

Query: 562 IVVDLLVKN 570
            ++D   K+
Sbjct: 418 TLMDAYFKS 426



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 153/307 (49%), Gaps = 11/307 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  N+ TY  LI+  C   R+      FG+++ +   PN A++N+LI G      +  A
Sbjct: 303 GVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRA 362

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  +LK  G +P+++ Y T I GLC       A  +  EM     E G+  K NT+ Y
Sbjct: 363 LELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQ----ENGI--KANTLIY 416

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM- 269
           +T++D   K G   +   L  +M++ +    VVT+  LI GLC     ++A   F  M  
Sbjct: 417 TTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSN 476

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D G+QP+   +  ++D LCK  ++  A+ L + M Q G+ P+   Y +LMDG    G + 
Sbjct: 477 DFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNML 536

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  L   M  +G K D ++Y  L+ G+ +  ++++A S   EM+ + I P  V    L 
Sbjct: 537 EALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV----LC 592

Query: 390 LGLFEIH 396
           +G+ + H
Sbjct: 593 IGVLKKH 599



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 2/293 (0%)

Query: 281 NVIMDELCKNR-KMDEASRLLDLMVQRGV-RPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           N I+ E+  ++ +++E     +L   R V  P    ++ L      +G +  A + F  M
Sbjct: 30  NSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKM 89

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +         S N L++ + K  + +     +++M+  G KPTV TYN +   +++   +
Sbjct: 90  KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDI 149

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E A  LF+EM+  G+  DT TY + IDG  K G + + V  F  ++ + CE D+  YN L
Sbjct: 150 EAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSL 209

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+  CKSG+L    E +  +    L PNVV+Y+ ++   C +  M +A   ++DM     
Sbjct: 210 INCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            P+  T+  L+    +I   S    L ++M E  V  +    + ++D L   E
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAE 322



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 100/210 (47%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P    ++ LF  L ++  +E A + F +M+R  V   TR+    +    K G        
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F+ +     +  +  YN +ID + K G ++ A  LF  +    L+P+ VTYN MI G   
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++D     F +M+  +  PDVIT++ LI+ F +  +  K  E   +MK+  + P+   
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
            S +VD   K ++  +++  ++   R G V
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHV 270


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 169/514 (32%), Positives = 247/514 (48%), Gaps = 12/514 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNIL--LASLAKN---KHYDTRLNATGLFPNLYTYNILI 103
           EA   F  M R    P   S   +L   A L K    K +   +   G  P ++TYNI+I
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +C CK G V      F  +      P+  T+NS+I G     R+ +    F ++K   CE
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+VITYN LIN  C+ G   I L  + EM  GNG      KPN V+YST++D  CKEG +
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMM 383

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A   ++ M+   + P+  TY SLI   C   + ++A RL  EM+  GV+ +VVT+  +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D LC   +M EA  L   M   GV PN  +YN L+ GF     ++RA EL   ++  G 
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K D + Y   I G C  +++E A  +  EM   GIK   + Y TL    F+       L 
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGL 462
           L DEM+   +     T+   IDGLCKN  + +AV+ F R       + +   +  +IDGL
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK  +++ A  LF  +    LVP+   Y  ++ G    G + +A  L   M E     D+
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           + +  L+ G    N+  K    L +M  + + PD
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 252/536 (47%), Gaps = 36/536 (6%)

Query: 49  EAFCIFDYML---RMHPSPPPVSSFNILLASLAKNKHYDTRLNATGL-FPNLYTYNILIN 104
           E++CI  ++L   RM+     V    +L  S A    +D   +   +  P    ++ L +
Sbjct: 143 ESYCIVAHILFCARMYYDANSVLKEMVL--SKADCDVFDVLWSTRNVCVPGFGVFDALFS 200

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
               +G +      F ++ R    P   + N L+       +  +    F  +   G  P
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIG--------- 200
            V TYN +I+ +C+ G    A  LFEEM                +G G++G         
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320

Query: 201 -----VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                + C+P+ +TY+ +I+  CK G +      + +MK   + P+VV+Y++L+   C  
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
               +A + +++M   G+ P+  T+  ++D  CK   + +A RL + M+Q GV  N  TY
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             L+DG C   ++  AEELFG M++ G   +  SYN LI+G+ K K ++ AL L  E+  
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +GIKP ++ Y T   GL  + ++E A  + +EM+  G+ A++  YTT +D   K+G   E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMI 494
            + L   ++ L  E+ +  +  LIDGLCK+  +  A + F  + +   L  N   +  MI
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            GLC D Q++ A  LF  M +    PD   +  L+ G  +     +   L  KM E
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 199/369 (53%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC P    +  +   L   G +++A   F +MK   + P   + N L+H        ++ 
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           KR F +M+  G +P+V T+N+++D +CK   ++ A  L + M  RG+ P+  TYN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F  +G+++     F  M+ M C+ D ++YN LIN +CK  ++   L  YREM   G+KP 
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VV+Y+TL     +   ++ A+K + +M+R G+  +  TYT+ ID  CK G + +A  L  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +  +  E ++  Y  LIDGLC + R+K A ELF  +    ++PN+ +YN +I G     
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            MD+A +L  +++     PD++ +   I G   + +      ++++MKE  +  ++ I +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 562 IVVDLLVKN 570
            ++D   K+
Sbjct: 547 TLMDAYFKS 555



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 177/378 (46%), Gaps = 40/378 (10%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S++ L+ +  K         +   +   GL PN YTY  LI+  CKIG +S  F  
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L+     N  T+ +LI GL    R+ EA  LF K+   G  PN+ +YN LI+G  +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 179 TGHTMIALNLFEEMA-------------------------------NGNGEIGVVCKPNT 207
             +   AL L  E+                                N   E G+  K N+
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI--KANS 542

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           + Y+T++D   K G   +   L  +MK+ +I   VVT+  LI GLC     ++A   F  
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602

Query: 268 MM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +  D G+Q +   F  ++D LCK+ +++ A+ L + MVQ+G+ P+   Y +LMDG    G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +  A  L   M  +G K D ++Y  L+ G     ++++A S   EM+ +GI P  V   
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722

Query: 387 TLFLGLFEIHQVEHALKL 404
           ++    +E+  ++ A++L
Sbjct: 723 SVLKKHYELGCIDEAVEL 740



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 15/268 (5%)

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKG--------------IKPT 381
           SM   G KH   SY I+ +     +   +A S+ +EMV SK                 P 
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
              ++ LF  L ++  +E A++ F +M+R  V   TR+    +    K G   +    F+
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +        +  YN +ID +CK G ++ A  LF  +    LVP+ VTYN MI G    G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++D     F +M++    PDVIT++ LI+ F +  +     E   +MK   + P+    S
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQGEV 589
            +VD   K  +  +++  ++   R G V
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLV 399


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/549 (30%), Positives = 273/549 (49%), Gaps = 50/549 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++++++  L K+K  D       ++   G  PN  TYN LI+ +   G  +     
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT------- 171
           F ++      P     NS I  L    R  EA  +F  +   G +P++I+Y+T       
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 397

Query: 172 ------------------------------LINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                                         LIN   R G    A+ +FE+M N  G I  
Sbjct: 398 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN-KGMI-- 454

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              P+TVT++T+I  LC+ G +D A   F  M D  + P    Y  LI G C+  +  +A
Sbjct: 455 ---PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 511

Query: 262 KRLFIEMMDQGVQP-SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           K L  EMM++ + P  V  F+ I++ LCK  ++ E   ++D+MVQ G RPN  T+N+LM+
Sbjct: 512 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 571

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+CL+G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KP
Sbjct: 572 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 631

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           T V Y+ +  GLF+  +   A K+F EM   G      TY   + GLC+N    EA  L 
Sbjct: 632 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 691

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             L  +  + DI  +N +I  + K GR + A ELF ++    LVPN+ TY++MI  L  +
Sbjct: 692 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 751

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
              ++A +LF+ +E++  A D    + ++   +   E +K +  L  + E  +  +AS +
Sbjct: 752 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTI 811

Query: 561 SIVVDLLVK 569
           S++  L  +
Sbjct: 812 SLLASLFSR 820



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 266/563 (47%), Gaps = 62/563 (11%)

Query: 63  SPPPVSSFNILLASLAKNKHY----DTRLNATGLF-------------PNLYTYNILINC 105
           +P P  + N +LA+LA+        D    A  LF             P ++TYNILI+C
Sbjct: 126 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 185

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           + ++ R  LG    GR+L++   P+  ++ SLI G   +  + +A  LF ++   G  P 
Sbjct: 186 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 244

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           ++  N++I  LC+      A ++ ++M +          P+  TYS IIDGLCK   +DK
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLIIDGLCKSKAMDK 298

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A+ +  QM +    P+ +TYNSLIHG   +  WNE+ R+F +M   GV P+V   N  + 
Sbjct: 299 AERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIH 358

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK--INRAEELFGSMESMGC 343
            L K+ + +EA  + D MV +G +P+  +Y+T++ G+       +     +F  M + G 
Sbjct: 359 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 418

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +   +NILIN Y +   +++A+ ++ +M +KG+ P  VT+ T+   L  I +++ AL 
Sbjct: 419 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 478

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-------------------- 443
            F+ M   GV      Y   I G C +G +++A EL   +                    
Sbjct: 479 KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNL 538

Query: 444 ----RILKCE------------LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
               R+ + +             ++  +N L++G C  G ++ A+ L  ++    + PN 
Sbjct: 539 CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 598

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             Y  ++ G C +G++D A  +F DM      P  + + +++HG  +    +   ++ H+
Sbjct: 599 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 658

Query: 548 MKEKKVMPDASIVSIVVDLLVKN 570
           M E           +V+  L +N
Sbjct: 659 MIESGTTVSIHTYGVVLGGLCRN 681



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 263/571 (46%), Gaps = 54/571 (9%)

Query: 46  TPNEAFCIFDYMLRM---HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNL 96
            P  A  +F  M R      SPP + ++NIL+    +    D       RL   GL P+ 
Sbjct: 152 APALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD 211

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           ++Y+ LI  F K G V      F  ++     P     NS+IK L     + +A ++  K
Sbjct: 212 FSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 270

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +   G  P++ TY+ +I+GLC++     A  + E+M     E G   +PN++TY+++I G
Sbjct: 271 MVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHG 324

Query: 217 -----------------------------------LCKEGFVDKAKALFLQMKDENINPD 241
                                              L K G  ++AK +F  M  +   PD
Sbjct: 325 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 384

Query: 242 VVTYNSLIHGLCHAND--WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           +++Y++++HG   A D    +   +F  M+ +G+ P+   FN++++   +   MD+A  +
Sbjct: 385 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 444

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            + M  +G+ P+  T+ T++   C +G+++ A   F  M  +G    +  Y  LI G C 
Sbjct: 445 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 504

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTY-NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + E+ +A  L  EM++K I P  V Y +++   L +  +V     + D M + G   +  
Sbjct: 505 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVV 564

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+ + ++G C  G + EA  L   +  +  E +   Y  L+DG CK+GR+  A  +F  +
Sbjct: 565 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 624

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            H  + P  V Y+I++ GL    +   A+ +F +M E+     + T+ +++ G  R N  
Sbjct: 625 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 684

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            + N LL K+    V  D    +IV+  + K
Sbjct: 685 DEANMLLEKLFAMNVKFDIITFNIVISAMFK 715



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 192/400 (48%), Gaps = 12/400 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILL-------ASLAKNKHYDTRLNATGLFPNLYTYN 100
           NEA CIFD M+   P P  +S   +L        + LA   +    +   G+ PN + +N
Sbjct: 367 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 426

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILIN + + G +    + F  +      P+  TF ++I  L    R+ +A   F  +   
Sbjct: 427 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +S+II+ LCKE
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKE 541

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G V + K +   M      P+VVT+NSL+ G C   +  EA  L   M   G++P+   +
Sbjct: 542 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 601

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++D  CKN ++D+A  +   M+ +GV+P +  Y+ ++ G     +   A+++F  M  
Sbjct: 602 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 661

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G      +Y +++ G C+N   +EA  L  ++ +  +K  ++T+N +   +F++ + + 
Sbjct: 662 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE 721

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           A +LFD +   G+  + +TY+  I  L K     EA  LF
Sbjct: 722 AKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 761



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 6/241 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G+ PN Y Y  L++ +CK GR+      F  +L     P +  ++ ++ GL    R
Sbjct: 589 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 648

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              A  +F ++   G   ++ TY  ++ GLCR   T  A  L E++   N       K +
Sbjct: 649 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN------VKFD 702

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T++ +I  + K G   +AK LF  +    + P++ TY+ +I  L     + EA  LFI
Sbjct: 703 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 762

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +   G        N I+  L    ++ +AS  L ++ +  +   A T + L   F   G
Sbjct: 763 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 822

Query: 327 K 327
           K
Sbjct: 823 K 823



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 436 AVELFRTLRILKCELD----IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           A+ELF+ +    C       I  YN LID   +  R      +   L    L P+  +Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I G   DG++DKA  LFL+M E    P ++  + +I    ++ E  K   ++ KM + 
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 552 KVMPDASIVSIVVDLLVKNE 571
            + PD    S+++D L K++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSK 294


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 226/413 (54%), Gaps = 9/413 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G  P++ TYN+LI  +CK G +        R+      P+  T+N++++ L    +
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  +  +     C P+VITY  LI   C       A+ L +EM          CKP+
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG------CKPD 278

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A+RL  
Sbjct: 279 VVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLA 338

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ +G  PSVVTFN++++ LC+ R +  A  +L+ M + G  PN+ +YN L+ GFC   
Sbjct: 339 DMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEK 398

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K++RA E    M S GC  D V+YN L+   CK+ + + A+ +  ++ SKG  P ++TYN
Sbjct: 399 KMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYN 458

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL ++ + E+A +L +EM+R G+  D  TY+T + GL   G + EA+++F  +  L
Sbjct: 459 TVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGL 518

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
             +     YN ++ GLCK+ +   A +    +      P   TY I+I+G+ +
Sbjct: 519 SIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 158/556 (28%), Positives = 273/556 (49%), Gaps = 17/556 (3%)

Query: 10  SFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSS 69
           S  F  +P S+   +F+ L    R     E  ++ ++ +EA  +   + ++      VS+
Sbjct: 29  SRPFVLSPASSVSHHFTKLKAT-RSRKRLENRVSAVSKSEASGMNGRLQQI------VST 81

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
            N  L  +         +N +  F   +  NI +    + G +  G     R++     P
Sbjct: 82  PNGDLNGIGMESSSPNGVNGSRSFEE-FASNIHLRKLVRNGELEEGLKFLERMIYQGDIP 140

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           +     SLI+G     +  +A  +   L+  G  P+VITYN LI G C++G    AL + 
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL 200

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           E M+           P+ VTY+TI+  LC  G + +A  +  +       PDV+TY  LI
Sbjct: 201 ERMS---------VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILI 251

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
              C+ +   +A +L  EM  +G +P VVT+NV+++ +CK  ++DEA + L+ M   G +
Sbjct: 252 EATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQ 311

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  T+N ++   C  G+   AE L   M   GC    V++NILIN  C+ + +  A+ +
Sbjct: 312 PNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDV 371

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             +M   G  P  ++YN L  G  +  +++ A++  + M   G   D  TY T +  LCK
Sbjct: 372 LEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK 431

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +G    AVE+   L    C   +  YN +IDGL K G+ ++A EL   +    L P+++T
Sbjct: 432 DGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIIT 491

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y+ +++GL  +G++D+A  +F DME  +  P  +T++ ++ G  +  + S+  + L  M 
Sbjct: 492 YSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV 551

Query: 550 EKKVMPDASIVSIVVD 565
           EK   P  +  +I+++
Sbjct: 552 EKGCKPTKATYTILIE 567



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 235/468 (50%), Gaps = 15/468 (3%)

Query: 71  NILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           NI L  L +N   +       R+   G  P++     LI  FC+ G+          +  
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           S   P+  T+N LI G      I +A  +  ++      P+V+TYNT++  LC +G    
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGKLKE 227

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ + +       ++   C P+ +TY+ +I+  C +  V +A  L  +M+ +   PDVVT
Sbjct: 228 AMEVLDR------QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 281

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN LI+G+C     +EA +    M   G QP+V+T N+I+  +C   +  +A RLL  M+
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           ++G  P+  T+N L++  C    + RA ++   M   GC  + +SYN L++G+C+ K+++
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A+     MVS+G  P +VTYNTL   L +  + + A+++ +++   G +    TY T I
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           DGL K G    A EL   +R    + DI  Y+ L+ GL   G++  A ++F  +    + 
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK 521

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           P+ VTYN ++ GLC   Q  +A D    M E    P   T+ +LI G 
Sbjct: 522 PSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/549 (30%), Positives = 273/549 (49%), Gaps = 50/549 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++++++  L K+K  D       ++   G  PN  TYN LI+ +   G  +     
Sbjct: 116 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 175

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT------- 171
           F ++      P     NS I  L    R  EA  +F  +   G +P++I+Y+T       
Sbjct: 176 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 235

Query: 172 ------------------------------LINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                                         LIN   R G    A+ +FE+M N  G I  
Sbjct: 236 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN-KGMI-- 292

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              P+TVT++T+I  LC+ G +D A   F  M D  + P    Y  LI G C+  +  +A
Sbjct: 293 ---PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 349

Query: 262 KRLFIEMMDQGVQP-SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           K L  EMM++ + P  V  F+ I++ LCK  ++ E   ++D+MVQ G RPN  T+N+LM+
Sbjct: 350 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 409

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+CL+G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KP
Sbjct: 410 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 469

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           T V Y+ +  GLF+  +   A K+F EM   G      TY   + GLC+N    EA  L 
Sbjct: 470 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 529

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             L  +  + DI  +N +I  + K GR + A ELF ++    LVPN+ TY++MI  L  +
Sbjct: 530 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 589

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
              ++A +LF+ +E++  A D    + ++   +   E +K +  L  + E  +  +AS +
Sbjct: 590 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTI 649

Query: 561 SIVVDLLVK 569
           S++  L  +
Sbjct: 650 SLLASLFSR 658



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 250/515 (48%), Gaps = 45/515 (8%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P ++TYNILI+C+ ++ R  LG    GR+L++   P+  ++ SLI G   +  + +A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F ++   G  P ++  N++I  LC+      A ++ ++M +          P+  TYS I
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLI 124

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGLCK   +DKA+ +  QM +    P+ +TYNSLIHG   +  WNE+ R+F +M   GV
Sbjct: 125 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 184

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK--INRA 331
            P+V   N  +  L K+ + +EA  + D MV +G +P+  +Y+T++ G+       +   
Sbjct: 185 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 244

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +F  M + G   +   +NILIN Y +   +++A+ ++ +M +KG+ P  VT+ T+   
Sbjct: 245 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 304

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-------- 443
           L  I +++ AL  F+ M   GV      Y   I G C +G +++A EL   +        
Sbjct: 305 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 364

Query: 444 ----------------RILKCE------------LDIQAYNCLIDGLCKSGRLKFAWELF 475
                           R+ + +             ++  +N L++G C  G ++ A+ L 
Sbjct: 365 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 424

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++    + PN   Y  ++ G C +G++D A  +F DM      P  + + +++HG  + 
Sbjct: 425 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 484

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              +   ++ H+M E           +V+  L +N
Sbjct: 485 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 519



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 257/551 (46%), Gaps = 51/551 (9%)

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           SPP + ++NIL+    +    D       RL   GL P+ ++Y+ LI  F K G V    
Sbjct: 10  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAH 68

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  ++     P     NS+IK L     + +A ++  K+   G  P++ TY+ +I+GL
Sbjct: 69  CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 128

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG-------------------- 216
           C++     A  + E+M     E G   +PN++TY+++I G                    
Sbjct: 129 CKSKAMDKAERVLEQMV----EAGT--RPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 182

Query: 217 ---------------LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND--WN 259
                          L K G  ++AK +F  M  +   PD+++Y++++HG   A D    
Sbjct: 183 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 242

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +   +F  M+ +G+ P+   FN++++   +   MD+A  + + M  +G+ P+  T+ T++
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
              C +G+++ A   F  M  +G    +  Y  LI G C + E+ +A  L  EM++K I 
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 362

Query: 380 PTVVTY-NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           P  V Y +++   L +  +V     + D M + G   +  T+ + ++G C  G + EA  
Sbjct: 363 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 422

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   +  +  E +   Y  L+DG CK+GR+  A  +F  + H  + P  V Y+I++ GL 
Sbjct: 423 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 482

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
              +   A+ +F +M E+     + T+ +++ G  R N   + N LL K+    V  D  
Sbjct: 483 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 542

Query: 559 IVSIVVDLLVK 569
             +IV+  + K
Sbjct: 543 TFNIVISAMFK 553



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 192/400 (48%), Gaps = 12/400 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILL-------ASLAKNKHYDTRLNATGLFPNLYTYN 100
           NEA CIFD M+   P P  +S   +L        + LA   +    +   G+ PN + +N
Sbjct: 205 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 264

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILIN + + G +    + F  +      P+  TF ++I  L    R+ +A   F  +   
Sbjct: 265 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +S+II+ LCKE
Sbjct: 325 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCKE 379

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G V + K +   M      P+VVT+NSL+ G C   +  EA  L   M   G++P+   +
Sbjct: 380 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 439

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++D  CKN ++D+A  +   M+ +GV+P +  Y+ ++ G     +   A+++F  M  
Sbjct: 440 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 499

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G      +Y +++ G C+N   +EA  L  ++ +  +K  ++T+N +   +F++ + + 
Sbjct: 500 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE 559

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           A +LFD +   G+  + +TY+  I  L K     EA  LF
Sbjct: 560 AKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 599



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 6/241 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G+ PN Y Y  L++ +CK GR+      F  +L     P +  ++ ++ GL    R
Sbjct: 427 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 486

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              A  +F ++   G   ++ TY  ++ GLCR   T  A  L E++   N       K +
Sbjct: 487 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN------VKFD 540

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T++ +I  + K G   +AK LF  +    + P++ TY+ +I  L     + EA  LFI
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 600

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +   G        N I+  L    ++ +AS  L ++ +  +   A T + L   F   G
Sbjct: 601 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660

Query: 327 K 327
           K
Sbjct: 661 K 661



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN LID   +  R      +   L    L P+  +Y+ +I G   DG++DKA  LFL
Sbjct: 14  IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 72

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +M E    P ++  + +I    ++ E  K   ++ KM +  + PD    S+++D L K++
Sbjct: 73  EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 132


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/523 (30%), Positives = 265/523 (50%), Gaps = 27/523 (5%)

Query: 65  PPVSSFNILL-----ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V ++N +L     ASL   + +   + + G+ PN+YTYNIL+   C  G         
Sbjct: 154 PSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +  +   PN  T+N+L+        +  A  L   ++  G +PN++T+N+++NG+C+ 
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A  +F+EM            P+ V+Y+T++ G CK G   +A ++F +M  + I 
Sbjct: 274 GKMEDARKVFDEMVREG------LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PDVVT+ SLIH +C A +   A  L  +M ++G+Q + VTF  ++D  CK   +D+A   
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M Q  ++P+   YN L++G+C++G+++ A EL   ME+ G K D V+Y+ +I+ YCK
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 447

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N +   A  L ++M+ KG+ P  +TY++L   L    ++  A  LF  M + G+  D  T
Sbjct: 448 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFT 507

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           YT+ IDG CK G +  A+ L   +       D+  Y+ LI+GL KS R   A +L   L 
Sbjct: 508 YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 567

Query: 480 HGVLVPNVVTYNIM---------------IQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           H   +P    Y+ +               ++G C  G M++A  ++  M +     D   
Sbjct: 568 HEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 627

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDL 566
           + +LIHG  R     K      +M +    P++ S +S++  L
Sbjct: 628 YSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGL 670



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/556 (30%), Positives = 266/556 (47%), Gaps = 31/556 (5%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCF 106
           F   LR+ PS PP   F+ L+ S A                 + G  P++  YN ++   
Sbjct: 108 FLRALRLLPSSPP-RPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLLAL 166

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
                 S     F  +L     PN  T+N L++ L       EA ++   ++  GC PNV
Sbjct: 167 SDASLTSARRF-FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNV 225

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TYNTL+    R G    A  L   M  G        KPN VT++++++G+CK G ++ A
Sbjct: 226 VTYNTLVAAFFRAGEVDGAERLVGMMREGG------LKPNLVTFNSMVNGMCKAGKMEDA 279

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + +F +M  E + PD V+YN+L+ G C A   +EA  +F EM  +G+ P VVTF  ++  
Sbjct: 280 RKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHV 339

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +CK   ++ A  L+  M +RG++ N  T+  L+DGFC  G ++ A      M+    K  
Sbjct: 340 MCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPS 399

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V YN LINGYC    ++EA  L  EM +KG+KP VVTY+T+     +      A +L  
Sbjct: 400 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 459

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   GV  D  TY++ I  LC    + +A  LF+ +  L  + D   Y  LIDG CK G
Sbjct: 460 QMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEG 519

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            ++ A  L   +    ++P+VVTY+++I GL    +  +A+ L   +      P    +D
Sbjct: 520 NVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYD 579

Query: 527 MLIH---------------GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            L+H               GF      ++ +++   M ++    D S+ S+++    +  
Sbjct: 580 ALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 639

Query: 572 ISLKSLPSFLVQERQG 587
             +K+L SF  Q  QG
Sbjct: 640 NVMKAL-SFHKQMLQG 654



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 262/552 (47%), Gaps = 51/552 (9%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFC 107
           FD ML      P V ++NIL+ +L    H    L+        G  PN+ TYN L+  F 
Sbjct: 178 FDSMLS-DGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFF 236

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G V       G +      PN  TFNS++ G+    ++ +A  +F ++   G  P+ +
Sbjct: 237 RAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV 296

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGN---------GEIGVVCKP------------- 205
           +YNTL+ G C+ G +  AL++F EM               I V+CK              
Sbjct: 297 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQM 356

Query: 206 -------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                  N VT++ +IDG CK+GF+D A      MK   I P VV YN+LI+G C     
Sbjct: 357 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRM 416

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA+ L  EM  +G++P VVT++ I+   CKN     A  L   M+++GV P+A TY++L
Sbjct: 417 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSL 476

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C   +++ A  LF +M  +G + D+ +Y  LI+G+CK   VE ALSL+ +MV  G+
Sbjct: 477 IRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKL-FDEMQRDGVAADTR--------------TYTTF 423
            P VVTY+ L  GL +  +   A +L F     D + A+T+              +    
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLAL 596

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G C  G + EA ++++++      LD   Y+ LI G C++G +  A      +  G  
Sbjct: 597 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGF 656

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN  +   +I+GL  +G + +A  +   +    +  D      LI   +       V +
Sbjct: 657 APNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLD 716

Query: 544 LLHKMKEKKVMP 555
           +LH M +  ++P
Sbjct: 717 VLHGMAKDGLLP 728


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 150/426 (35%), Positives = 241/426 (56%), Gaps = 6/426 (1%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I +A A F ++      P+ +     +  + +       ++L  +M       GV    N
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM----DLFGVA--HN 120

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             T + +I+ LC+   +  A ++  +M    I PD VT+ +LI+GLC+     EA  LF 
Sbjct: 121 DYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFN 180

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  +   P+ VTF +++D LCK   + EA  + + M ++GV PN  TYN LM+G+CL  
Sbjct: 181 EMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRL 240

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           ++N A ++F  M   GC     SY+ILINGYCK++ ++EA +L  +M  K + P  VTYN
Sbjct: 241 EMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYN 300

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  GL     +  A +LF +M   G+  + RTY+  +DGLCK+G++ EA++L  +++  
Sbjct: 301 TLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQER 360

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           K E DI  YN LI G+  +G+L+ A ELF  L    + P+V TYNIMI+GL  +G  D+A
Sbjct: 361 KLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEA 420

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF  ME++   PD  +++++I GF++  +PS   +L+ +M  ++   D+S   +++DL
Sbjct: 421 YKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL 480

Query: 567 LVKNEI 572
              +EI
Sbjct: 481 ESHDEI 486



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 212/418 (50%), Gaps = 36/418 (8%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNL 96
           N I  ++A   F  M+ M+P P  V      L S+AK K Y T      +++  G+  N 
Sbjct: 63  NDIGIDDAMASFYRMIHMNPRPSFVE-LGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHND 121

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           YT NILIN  C++  +        ++ +    P++ TF +LI GL  E RI EA  LF +
Sbjct: 122 YTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNE 181

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE------------------ 198
           +      PN +T+  L++ LC+ G    A  +FE M     E                  
Sbjct: 182 MAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLE 241

Query: 199 -----------IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
                      +G  C P+  +YS +I+G CK   +D+AKAL  QM ++ + P+ VTYN+
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+ GLCHA+   EA+ LF +M   G+ P++ T+++++D LCK+  ++EA +LL  M +R 
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK 361

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + P+   YN L+ G  + GK+  A+ELF  + + G +    +YNI+I G  K    +EA 
Sbjct: 362 LEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAY 421

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
            L+R+M   G  P   +YN +  G  +      A++L DEM     +AD+ T+   +D
Sbjct: 422 KLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 181/370 (48%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A A F +M   N  P  V     +  +     ++    L  +M   GV  +  T N+
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC+   +  A  +L  M + G++P++ T+ TL++G C  G+I  A ELF  M    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + V++ IL++  CK   V EA  ++  M  KG++P + TYN L  G     ++  A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           K+F+ M   G A    +Y+  I+G CK+  I EA  L   +   +   +   YN L+ GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C +  L  A ELF  +    ++PN+ TY+I++ GLC  G +++A  L   M+E    PD+
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           + +++LI G     +     EL  K+    + P     +I++  L+K  +S ++   F  
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 583 QERQGEVGES 592
            E  G + +S
Sbjct: 427 MEDDGFLPDS 436


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/549 (30%), Positives = 273/549 (49%), Gaps = 50/549 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++++++  L K+K  D       ++   G  PN  TYN LI+ +   G  +     
Sbjct: 258 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 317

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT------- 171
           F ++      P     NS I  L    R  EA  +F  +   G +P++I+Y+T       
Sbjct: 318 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 377

Query: 172 ------------------------------LINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                                         LIN   R G    A+ +FE+M N  G I  
Sbjct: 378 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN-KGMI-- 434

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              P+TVT++T+I  LC+ G +D A   F  M D  + P    Y  LI G C+  +  +A
Sbjct: 435 ---PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 491

Query: 262 KRLFIEMMDQGVQP-SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           K L  EMM++ + P  V  F+ I++ LCK  ++ E   ++D+MVQ G RPN  T+N+LM+
Sbjct: 492 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 551

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+CL+G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+KP
Sbjct: 552 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 611

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           T V Y+ +  GLF+  +   A K+F EM   G      TY   + GLC+N    EA  L 
Sbjct: 612 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 671

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             L  +  + DI  +N +I  + K GR + A ELF ++    LVPN+ TY++MI  L  +
Sbjct: 672 EKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKE 731

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
              ++A +LF+ +E++  A D    + ++   +   E +K +  L  + E  +  +AS +
Sbjct: 732 ESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTI 791

Query: 561 SIVVDLLVK 569
           S++  L  +
Sbjct: 792 SLLASLFSR 800



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 266/563 (47%), Gaps = 62/563 (11%)

Query: 63  SPPPVSSFNILLASLAKNKHY----DTRLNATGLF-------------PNLYTYNILINC 105
           +P P  + N +LA+LA+        D    A  LF             P ++TYNILI+C
Sbjct: 106 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 165

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           + ++ R  LG    GR+L++   P+  ++ SLI G   +  + +A  LF ++   G  P 
Sbjct: 166 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 224

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           ++  N++I  LC+      A ++ ++M +          P+  TYS IIDGLCK   +DK
Sbjct: 225 ILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLIIDGLCKSKAMDK 278

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A+ +  QM +    P+ +TYNSLIHG   +  WNE+ R+F +M   GV P+V   N  + 
Sbjct: 279 AERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIH 338

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK--INRAEELFGSMESMGC 343
            L K+ + +EA  + D MV +G +P+  +Y+T++ G+       +     +F  M + G 
Sbjct: 339 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGI 398

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +   +NILIN Y +   +++A+ ++ +M +KG+ P  VT+ T+   L  I +++ AL 
Sbjct: 399 APNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 458

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-------------------- 443
            F+ M   GV      Y   I G C +G +++A EL   +                    
Sbjct: 459 KFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNL 518

Query: 444 ----RILKCE------------LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
               R+ + +             ++  +N L++G C  G ++ A+ L  ++    + PN 
Sbjct: 519 CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 578

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             Y  ++ G C +G++D A  +F DM      P  + + +++HG  +    +   ++ H+
Sbjct: 579 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 638

Query: 548 MKEKKVMPDASIVSIVVDLLVKN 570
           M E           +V+  L +N
Sbjct: 639 MIESGTTVSIHTYGVVLGGLCRN 661



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 191/426 (44%), Gaps = 37/426 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILL-------ASLAKNKHYDTRLNATGLFPNLYTYN 100
           NEA CIFD M+   P P  +S   +L        + LA   +    +   G+ PN + +N
Sbjct: 347 NEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 406

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILIN + + G +    + F  +      P+  TF ++I  L    R+ +A   F  +   
Sbjct: 407 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN----------GEIGVVCK------ 204
           G  P+   Y  LI G C  G  + A  L  EM N +            I  +CK      
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 526

Query: 205 --------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
                         PN VT++++++G C  G +++A AL   M    I P+   Y +L+ 
Sbjct: 527 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 586

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G C     ++A  +F +M+ +GV+P+ V +++I+  L + R+   A ++   M++ G   
Sbjct: 587 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 646

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  TY  ++ G C     + A  L   + +M  K D +++NI+I+   K    +EA  L+
Sbjct: 647 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 706

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             + + G+ P + TY+ +   L +    E A  LF  +++ G A+D+R     +  L   
Sbjct: 707 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 766

Query: 431 GYIIEA 436
             + +A
Sbjct: 767 AEVAKA 772



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 436 AVELFRTLRILKCELD----IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           A+ELF+ +    C       I  YN LID   +  R      +   L    L P+  +Y+
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I G   DG++DKA  LFL+M E    P ++  + +I    ++ E  K   ++ KM + 
Sbjct: 196 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 552 KVMPDASIVSIVVDLLVKNE 571
            + PD    S+++D L K++
Sbjct: 255 GIAPDLFTYSLIIDGLCKSK 274


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 169/505 (33%), Positives = 257/505 (50%), Gaps = 10/505 (1%)

Query: 64  PPPVSSFNILLASLAKNKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           PP   + N +L  LA+ +  +   RL      PN++T+NI+I+  CK G ++       R
Sbjct: 160 PPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLAR 219

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     +P+  T+NSLI G      + E   L  +++  GC P+V+TYN L+N  C+ G 
Sbjct: 220 MKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGR 279

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A + F EM       GV+   N VT+ST +D  CK G V +A  LF QM+ + + P+
Sbjct: 280 MERAYSYFAEMKRE----GVM--ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPN 333

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY  L+ G C A   ++A  L  EM+ QGV  +VVT+ V++D LCK  K+ EA  +  
Sbjct: 334 EVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFR 393

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LM + G+R N   Y TL+ G  +     RA  L   M+  G + D   Y  LI G C  +
Sbjct: 394 LMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQ 453

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +++EA SL  +M   G+KP  V Y  +    F+  +   A+ L  +M   G   +  TY 
Sbjct: 454 KLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYC 513

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PH 480
             +DGLCK G I EA+  F  +  L  E ++QAY  L+DGLCK+GRL  A  L   +   
Sbjct: 514 ALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDK 573

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
           G+ + NVV  ++M  G    G +  A  L   M  +    D+  +   + GF  +N   +
Sbjct: 574 GMSLDNVVCTSLM-DGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQE 632

Query: 541 VNELLHKMKEKKVMPDASIVSIVVD 565
             E+L +M E  + PDA + + +++
Sbjct: 633 AREVLSEMIENGITPDAVVYNCLIN 657



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 221/466 (47%), Gaps = 10/466 (2%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           + L++     G +    +A  R+      PN  T N ++  L  E     A  LF +L A
Sbjct: 132 DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA 191

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
               PNV T+N +I+ LC+ G    A  L   M        + C P+ VTY+++IDG  K
Sbjct: 192 ----PNVFTFNIMIDFLCKEGDLAEARALLARMK------AIGCSPDVVTYNSLIDGYGK 241

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G +++ + L  +M+     PDVVTYN+L++  C       A   F EM  +GV  +VVT
Sbjct: 242 CGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVT 301

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F+  +D  CKN  + EA +L   M  +G++PN  TY  L+DG C  G+++ A  L   M 
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G   + V+Y +L++G CK  +V EA  ++R M   GI+   + Y TL  G F     E
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL L  EM+  G+  D   Y   I GLC    + EA  L   +     + +   Y  ++
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM 481

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           D   K+ +   A  L   +      PN+VTY  ++ GLC  G +D+A   F  M +    
Sbjct: 482 DACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLE 541

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           P+V  +  L+ G  +     K   LL +M +K +  D  + + ++D
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMD 587



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/527 (30%), Positives = 257/527 (48%), Gaps = 40/527 (7%)

Query: 55  DYMLRMHPSPPPVSSFNILLAS--LAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           D++L  HP P   SS ++ LA+  LA+ + +       +RL A G  P+L    + +   
Sbjct: 60  DHLLS-HPLP---SSAHLCLAAHILARARLFPHSRSLLSRLLAPGHHPHLAASLVDL--- 112

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGCEPN 165
             + R +L   A G   RS       T  SL+    A+  +++ A L   +++     PN
Sbjct: 113 --LHRAAL---ALGP-RRSALPSVVDTLLSLL----ADRGLLDDAVLALARVRELRVPPN 162

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
             T N ++  L R   + +A  LFE++            PN  T++ +ID LCKEG + +
Sbjct: 163 TRTCNHILLCLARERSSELAWRLFEQLP----------APNVFTFNIMIDFLCKEGDLAE 212

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A+AL  +MK    +PDVVTYNSLI G     +  E ++L  EM   G +P VVT+N +++
Sbjct: 213 ARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVN 272

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             CK  +M+ A      M + GV  N  T++T +D FC  G +  A +LF  M   G K 
Sbjct: 273 CFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKP 332

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           ++V+Y  L++G CK   +++AL L  EMV +G+   VVTY  L  GL +  +V  A  +F
Sbjct: 333 NEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVF 392

Query: 406 DEMQRDGVAADTRTYTTFIDG--LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
             M+R G+ A+   YTT I G  + KN     A+ L   ++    ELD+  Y  LI GLC
Sbjct: 393 RLMERAGIRANELLYTTLIHGHFVYKNSE--RALSLLSEMKDKGMELDVSLYGALIWGLC 450

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
              +L  A  L   +    L PN V Y  ++       +  +A  L   M ++   P+++
Sbjct: 451 NLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIV 510

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           T+  L+ G  +     +     +KM +  + P+    + +VD L KN
Sbjct: 511 TYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKN 557



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 155/362 (42%), Gaps = 36/362 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNIL 102
           EA  +F  M RM    P   ++  L+    K    D  L  T      G+  N+ TY +L
Sbjct: 317 EAMKLFAQM-RMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVL 375

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  CK G+V+     F  + R+    N   + +LI G         A +L +++K  G 
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435

Query: 163 EPNVITYNTLINGLCR-------------------TGHTMIALNLFEEMANGNGEIGVVC 203
           E +V  Y  LI GLC                      + +I  N+ +       E   + 
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495

Query: 204 ----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     +PN VTY  ++DGLCK G +D+A + F +M D  + P+V  Y +L+ GLC
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                ++A  L  EM+D+G+    V    +MD   K   + +A  L   M+  G++ +  
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            Y   + GFC +  I  A E+   M   G   D V YN LIN   K   +EEA  L  EM
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675

Query: 374 VS 375
            S
Sbjct: 676 ES 677



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 7/266 (2%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           + +   G+  ++  Y  LI   C + ++        ++      PN   + +++      
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            +  EA AL  K+   G  PN++TY  L++GLC+ G    A++ F +M     ++G+  +
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV----DLGL--E 541

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN   Y+ ++DGLCK G +DKA  L  +M D+ ++ D V   SL+ G     +  +A  L
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFAL 601

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M++ G+Q  +  +   +   C    + EA  +L  M++ G+ P+A  YN L++    
Sbjct: 602 KAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQK 661

Query: 325 MGKINRAEELFGSMES-MGCKHDDVS 349
           +G +  A  L   MES + C + D +
Sbjct: 662 LGNMEEAAILQNEMESLLSCTNADAA 687



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 4/229 (1%)

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + +  E A  L+ ++ +    P V T+N +   L +   +  A  L   M+  G + D  
Sbjct: 175 RERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVV 230

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY + IDG  K G + E  +L   +R   C  D+  YN L++  CK GR++ A+  F  +
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM 290

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               ++ NVVT++  +   C +G + +A  LF  M      P+ +T+  L+ G  +    
Sbjct: 291 KREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRL 350

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                L ++M ++ V  +    +++VD L K     ++   F + ER G
Sbjct: 351 DDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 172/577 (29%), Positives = 280/577 (48%), Gaps = 70/577 (12%)

Query: 65  PPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIG------R 111
           P + S N LL  L K        K +D  + A  + P++YTY  +I+  CK+G      R
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDG-MCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 245

Query: 112 VSLGFIAFGRILRSC-----------FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           V L      R+L                P+  T++ LI G   E R  EA  +  ++   
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 305

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC--KPNTVTYSTIIDGLC 218
           G +P  ITYN LI+G  R G    A  + +EM        V C  + N + ++T+++G+C
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEM--------VACGIEANLIIWNTLLNGVC 357

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G ++KA  +  +M ++ + PD  TY+ LI G C   +   A  L  EM  + + P+V+
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T++VI++ LC+   +   + +L  MV  G++PNA  Y TLM      G++  +  +   M
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D   YN LI G+CK K +EEA +   EM+ + ++P   TY     G  +  ++
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E A + F+EM   GV  +   YT  I+G CK G + EA  +FR +   +   D+Q Y+ L
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPN-------------------------------- 486
           I GL ++G++  A+ +F  L    L+PN                                
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657

Query: 487 ---VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
              +VTYNI+I GLC  G++++A++LF D+E     P+ +T+  ++ G+ +   P+   +
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 717

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           LL +M  + V PDA I +++++   K E   K+L  F
Sbjct: 718 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 170/545 (31%), Positives = 265/545 (48%), Gaps = 77/545 (14%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P+LYTY+ILIN FC   R     +    ++     P   T+N+LI G   +  I +A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ A G E N+I +NTL+NG+C+ G    AL + +EM     E GV  +P++ TY
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM----EKGV--EPDSQTY 384

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC----------------- 253
           S +I+G C+   + +A  L  +MK   + P V+TY+ +I+GLC                 
Sbjct: 385 SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM 444

Query: 254 ----------------HANDWN-EAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDE 295
                           HA +   E  R+ +E M +QG+ P V  +N ++   CK ++M+E
Sbjct: 445 NGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEE 504

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A   L  M++R +RPNA TY   +DG+   G++  A+  F  M S G   +   Y  LI 
Sbjct: 505 ARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE 564

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+CK   V EA S++R ++S+ +   V TY+ L  GL    ++  A  +F E+Q  G+  
Sbjct: 565 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 624

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TY + I G CK G + +A +L   + I     DI  YN LIDGLCK+G ++ A  LF
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 684

Query: 476 CSLPHGVLVPNVVTYNIMIQGL-----------------------------------CND 500
             +    L PN VTY  M+ G                                    C +
Sbjct: 685 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE 744

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            + +KA DLF +M E   A   ++F+ LI G+ +  +  + N LL +M EK+ +P+    
Sbjct: 745 EKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803

Query: 561 SIVVD 565
           + ++D
Sbjct: 804 TSLID 808



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 249/498 (50%), Gaps = 18/498 (3%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P + TY+++IN  C+ G +         ++ +   PNA  + +L+     E R+ E+ 
Sbjct: 412 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 471

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  +++  G  P+V  YN+LI G C+      A     EM           +PN  TY 
Sbjct: 472 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR------LRPNAHTYG 525

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
             IDG  K G ++ A   F +M    + P+V  Y +LI G C   +  EA  +F  ++ +
Sbjct: 526 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 585

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            V   V T++V++  L +N KM EA  +   + ++G+ PNA TYN+L+ G C  G +++A
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 645

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M   G   D V+YNILI+G CK  E+E A +L+ ++  +G+ P  VTY  +  G
Sbjct: 646 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDG 705

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +      A +L +EM   GV  D   Y   ++  CK     +A++LF+ + + K    
Sbjct: 706 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGFAS 764

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             ++N LI+G CKSG+L+ A  L   +     +PN VTY  +I   C  G M +A+ L+L
Sbjct: 765 TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 824

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL---- 567
           +M+E    P   T+  L+HG+  I   S+V+ L  +M  K + PD     +++D      
Sbjct: 825 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 884

Query: 568 -------VKNEISLKSLP 578
                  +K+EI +K +P
Sbjct: 885 NVMEACKLKDEILVKGMP 902



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 215/438 (49%), Gaps = 13/438 (2%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
            Y   + + G+ PN+  Y  LI   CK G V+  F  F  IL      +  T++ LI GL
Sbjct: 542 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 601

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
               ++ EA  +F++L+  G  PN  TYN+LI+G C+ G+   A  L EEM         
Sbjct: 602 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG----- 656

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              P+ VTY+ +IDGLCK G +++AK LF  ++   + P+ VTY +++ G C + +   A
Sbjct: 657 -INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 715

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            +L  EM+ +GV P    +NVI++  CK  K ++A  L   M+++G   +  ++NTL++G
Sbjct: 716 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEG 774

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +C  GK+  A  L   M       + V+Y  LI+  CK   + EA  L+ EM  + + PT
Sbjct: 775 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 834

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TY +L  G   I  +     LF+EM   G+  D  TY   ID  C+ G ++EA +L  
Sbjct: 835 AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 894

Query: 442 TLRI----LKCELDIQAYNC--LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
            + +    +K    +    C  +  G   +G +  A E+  S+     V N  +   ++ 
Sbjct: 895 EILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 954

Query: 496 GLCNDGQMDKARDLFLDM 513
           G  N    + + +L   M
Sbjct: 955 GNQNGANSEDSDNLLKQM 972



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 257/526 (48%), Gaps = 54/526 (10%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN   +++L++ + K+G +      F       F P+  + NSL+  L   +++     +
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG-------------EIG 200
           F  + A    P+V TY  +I+  C+ G+   A  +  EM                  + G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           +V  P+  TY  +I+G C E    +AK + L+M D  + P+ +TYN+LI G     D  +
Sbjct: 272 LV--PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A R+  EM+  G++ +++ +N +++ +CK  KM++A  ++  M+++GV P++ TY+ L++
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 389

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G C    + RA EL   M+        ++Y+++ING C+   ++   ++ REMV  G+KP
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 449

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK-------NGYI 433
             V Y TL     +  +VE +  + + M+  G+  D   Y + I G CK         Y+
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509

Query: 434 IEAVELFRTLR----------------------------ILKCEL--DIQAYNCLIDGLC 463
           +E +E  R LR                            +L C +  ++  Y  LI+G C
Sbjct: 510 MEMLE--RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K G +  A+ +F  +    ++ +V TY+++I GL  +G+M +A  +F +++E    P+  
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T++ LI G  +     K ++LL +M  K + PD    +I++D L K
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 673



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 194/401 (48%), Gaps = 25/401 (6%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EG++      EAF +F ++L        V ++++L+  L++N          + L   G
Sbjct: 568 KEGNVT-----EAFSVFRFILSRR-VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN +TYN LI+  CK G V         +      P+  T+N LI GL     I  A 
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            LF  ++  G  PN +TY  +++G C++ +   A  L EEM      +     P+   Y+
Sbjct: 682 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM------LLRGVPPDAFIYN 735

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            I++  CKE   +KA  LF +M ++      V++N+LI G C +    EA  L  EM+++
Sbjct: 736 VILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEK 794

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
              P+ VT+  ++D  CK   M EA RL   M +R V P A TY +L+ G+  +G ++  
Sbjct: 795 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 854

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI------KPTVVTY 385
             LF  M + G + D ++Y ++I+ YC+   V EA  L  E++ KG+      +  + T 
Sbjct: 855 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTC 914

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + +  G      ++ A ++   M + G  ++T +    +DG
Sbjct: 915 SVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLG------FIAFGRILRSCFTPNAATFNSLIKGLH 142
           A G+ P+  TY ++I+ +C+ G V          +  G  ++S F     T + + +G  
Sbjct: 863 AKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQ 922

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
               + EAA +   +  FG   N  +   L++G     ++  + NL ++MA
Sbjct: 923 IAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 973


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 167/550 (30%), Positives = 273/550 (49%), Gaps = 51/550 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++++++  L K+K  D       ++   G  PN  TYN LI+ +   G  +     
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT------- 171
           F ++      P     NS I  L    R  EA  +F  +   G +P++I+Y+T       
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY 397

Query: 172 -------------------------------LINGLCRTGHTMIALNLFEEMANGNGEIG 200
                                          LIN   R G    A+ +FE+M N  G I 
Sbjct: 398 WYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN-KGMI- 455

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
               P+TVT++T+I  LC+ G +D A   F  M D  + P    Y  LI G C+  +  +
Sbjct: 456 ----PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 511

Query: 261 AKRLFIEMMDQGVQP-SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           AK L  EMM++ + P  V  F+ I++ LCK  ++ E   ++D+MVQ G RPN  T+N+LM
Sbjct: 512 AKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLM 571

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           +G+CL+G +  A  L  +M S+G + +   Y  L++GYCKN  +++AL+++R+M+ KG+K
Sbjct: 572 EGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVK 631

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           PT V Y+ +  GLF+  +   A K+F EM   G      TY   + GLC+N    EA  L
Sbjct: 632 PTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANML 691

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              L  +  + DI  +N +I  + K GR + A ELF ++    LVPN+ TY++MI  L  
Sbjct: 692 LEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIK 751

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           +   ++A +LF+ +E++  A D    + ++   +   E +K +  L  + E  +  +AS 
Sbjct: 752 EESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEAST 811

Query: 560 VSIVVDLLVK 569
           +S++  L  +
Sbjct: 812 ISLLASLFSR 821



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/564 (25%), Positives = 261/564 (46%), Gaps = 63/564 (11%)

Query: 63  SPPPVSSFNILLASLAKNKHY----DTRLNATGLF-------------PNLYTYNILINC 105
           +P P  + N +LA+LA+        D    A  LF             P ++TYNILI+C
Sbjct: 126 APVPARALNGILAALARAPPSAACGDAPALAIELFKRMDRWACPRHSPPTIHTYNILIDC 185

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           + ++ R  LG    GR+L++   P+  ++ SLI G   +  + +A  LF ++   G  P 
Sbjct: 186 YRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 244

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           ++  N++I  LC+      A ++ ++M +          P+  TYS IIDGLCK   +DK
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLFTYSLIIDGLCKSKAMDK 298

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A+ +  QM +    P+ +TYNSLIHG   +  WNE+ R+F +M   GV P+V   N  + 
Sbjct: 299 AERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIH 358

Query: 286 ELCKNRKMDEASRLLD--------------------------------------LMVQRG 307
            L K+ + +EA  + D                                      LM+ +G
Sbjct: 359 ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKG 418

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + PN   +N L++ +   G +++A  +F  M++ G   D V++  +I+  C+   +++AL
Sbjct: 419 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 478

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTTFIDG 426
             +  MV  G+ P+   Y  L  G     ++  A +L  EM  +D      + +++ I+ 
Sbjct: 479 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 538

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G + E  ++   +       ++  +N L++G C  G ++ A+ L  ++    + PN
Sbjct: 539 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 598

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
              Y  ++ G C +G++D A  +F DM      P  + + +++HG  +    +   ++ H
Sbjct: 599 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 658

Query: 547 KMKEKKVMPDASIVSIVVDLLVKN 570
           +M E           +V+  L +N
Sbjct: 659 EMIESGTTVSIHTYGVVLGGLCRN 682



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 15/402 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVS---------SFNILLASLAKNKHYDTRLNATGLFPNLYT 98
           NEA CIFD M+   P P  +S          + + +  +  +  ++  L   G+ PN + 
Sbjct: 367 NEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLT-KGIAPNKHV 425

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +NILIN + + G +    + F  +      P+  TF ++I  L    R+ +A   F  + 
Sbjct: 426 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 485

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +S+II+ LC
Sbjct: 486 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLC 540

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           KEG V + K +   M      P+VVT+NSL+ G C   +  EA  L   M   G++P+  
Sbjct: 541 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 600

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +  ++D  CKN ++D+A  +   M+ +GV+P +  Y+ ++ G     +   A+++F  M
Sbjct: 601 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 660

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G      +Y +++ G C+N   +EA  L  ++ +  +K  ++T+N +   +F++ + 
Sbjct: 661 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 720

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           + A +LFD +   G+  + +TY+  I  L K     EA  LF
Sbjct: 721 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 762



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 6/241 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G+ PN Y Y  L++ +CK GR+      F  +L     P +  ++ ++ GL    R
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              A  +F ++   G   ++ TY  ++ GLCR   T  A  L E++   N       K +
Sbjct: 650 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN------VKFD 703

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T++ +I  + K G   +AK LF  +    + P++ TY+ +I  L     + EA  LFI
Sbjct: 704 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 763

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +   G        N I+  L    ++ +AS  L ++ +  +   A T + L   F   G
Sbjct: 764 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 823

Query: 327 K 327
           K
Sbjct: 824 K 824



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 436 AVELFRTLRILKCELD----IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           A+ELF+ +    C       I  YN LID   +  R      +   L    L P+  +Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I G   DG++DKA  LFL+M E    P ++  + +I    ++ E  K   ++ KM + 
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 552 KVMPDASIVSIVVDLLVKNE 571
            + PD    S+++D L K++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSK 294


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/442 (35%), Positives = 240/442 (54%), Gaps = 14/442 (3%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           +IL+  + K  R  LGF AF R        +  + N L+ GL     I +   ++ ++  
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
              EP +I++N +INGLC+ G    A ++ E+M       GV    N +TY+T+IDG CK
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK----VRGV--SANVITYNTLIDGYCK 210

Query: 220 EGFVD---KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
            G +    KA A+  +M+ + I P+ VT+N LI G C   + + A ++F EM  QGV+P+
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VVT+N +++ LC N K++EA+ L D MV   ++PN  T+N L++GFC    + +A ELF 
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   G   +  +YNILI+ YCK++ +E+A +LYR M+ KG+ P V TYN L  GL    
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +E A  L  EM    + AD  TY   ID LC  G + +A+ L   +     +     YN
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYN 450

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +IDG CK G L+ A  L   +     + NV TYN++I+G C   +++ A  L  +M E 
Sbjct: 451 TMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEK 510

Query: 517 AAAP-----DVITFDMLIHGFI 533
              P     +++T +M+  GF+
Sbjct: 511 GLIPNRMTYEIVTEEMMEKGFV 532



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 157/498 (31%), Positives = 255/498 (51%), Gaps = 32/498 (6%)

Query: 14  ASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL 73
           +S PIS  ++   S + +    T  +  I +    ++FC    ++            +IL
Sbjct: 55  SSKPISRVQTPLLSFINYS---TQEQTQILLSVSGDSFCANSIIV------------DIL 99

Query: 74  LASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
           + + AKN           R +  GL  ++ + N L++   K+G +      +  ++R   
Sbjct: 100 VWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRI 159

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT---MI 184
            P   +FN +I GL    ++ +A  +   +K  G   NVITYNTLI+G C+ G       
Sbjct: 160 EPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYK 219

Query: 185 ALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           A  + +EM A+G      +C PN VT++ +IDG CK+  V  A  +F +M  + + P+VV
Sbjct: 220 ADAILKEMRADG------IC-PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV 272

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYNSLI+GLC+    NEA  L  +M++  ++P+++T N +++  CKN+ + +A  L D M
Sbjct: 273 TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            ++G+ PN  TYN L+D +C    +  A  L+  M   G   D  +YN LI G C+  ++
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           E A +L  EM +K +K  ++TYN L   L    +++ AL+L DEM R G+     TY T 
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG CK G +  A+ L   +  +    ++  YN LI G CK  +L+ A  L   +    L
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512

Query: 484 VPNVVTYNIMIQGLCNDG 501
           +PN +TY I+ + +   G
Sbjct: 513 IPNRMTYEIVTEEMMEKG 530



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 234/446 (52%), Gaps = 9/446 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  N+   + L+       R       F +   +G + +V + N L++GL + G      
Sbjct: 89  FCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDME 148

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +++EM      I    +P  ++++ +I+GLCK G ++KA  +   MK   ++ +V+TYN
Sbjct: 149 FVYKEM------IRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYN 202

Query: 247 SLIHGLCHANDWNE---AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +LI G C      +   A  +  EM   G+ P+ VTFN+++D  CK++ +  A ++   M
Sbjct: 203 TLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEM 262

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            ++GV+PN  TYN+L++G C  GK+N A  L   M +   K + +++N L+NG+CKNK V
Sbjct: 263 NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMV 322

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A  L+ +M  +GI P V TYN L     +   +E A  L+  M   GV  D  TY   
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I GLC+ G +  A  L   +     + D+  YN LID LC  G +K A  L   +    L
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P+ +TYN MI G C +G +  A +L   ME+     +V T+++LI GF + ++    N 
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
           LL++M EK ++P+     IV + +++
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMME 528



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 198/390 (50%), Gaps = 16/390 (4%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCF 106
           ++  M+R    P  +S FNI++  L K    NK  D    +   G+  N+ TYN LI+ +
Sbjct: 150 VYKEMIRRRIEPTLIS-FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGY 208

Query: 107 CKIGRVSLGFIA---FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           CK+G++   + A      +      PN  TFN LI G   +  +  A  +F ++   G +
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PNV+TYN+LINGLC  G    A  L ++M N         KPN +T++ +++G CK   V
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNS------CLKPNIITHNALLNGFCKNKMV 322

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A  LF  M  + I P+V TYN LI   C   +  +A  L+  M+ +GV P V T+N +
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+   ++ A  L+  M  + ++ +  TYN L+D  C  G++ +A  L   M   G 
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K   ++YN +I+GYCK   +  AL+L  +M   G    V TYN L  G  +  ++E A  
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           L +EM   G+  +  TY    + + + G++
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 136/246 (55%), Gaps = 11/246 (4%)

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E F      G K    S N L++G  K  E+ +   +Y+EM+ + I+PT++++N +  GL
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK----- 447
            ++ ++  A  + ++M+  GV+A+  TY T IDG CK G I    ++++   ILK     
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKI---GKMYKADAILKEMRAD 230

Query: 448 --CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  ++  +N LIDG CK   +  A ++F  +    + PNVVTYN +I GLCN+G++++
Sbjct: 231 GICPNEV-TFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNE 289

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  L   M  +   P++IT + L++GF +     +  EL   M ++ + P+ +  +I++D
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349

Query: 566 LLVKNE 571
              K+E
Sbjct: 350 AYCKDE 355



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           +IL+  Y KN         ++     G+K +V + N L  GL ++ ++     ++ EM R
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
             +     ++   I+GLCK G + +A ++   +++     ++  YN LIDG CK G++  
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGK 216

Query: 471 AWE---LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
            ++   +   +    + PN VT+NI+I G C D  +  A  +F +M      P+V+T++ 
Sbjct: 217 MYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS 276

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LI+G     + ++   L  +M    + P+    + +++   KN++  ++   F    +QG
Sbjct: 277 LINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG 336


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 248/484 (51%), Gaps = 6/484 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI+   + G        + R++     P+  T+++L+  L  + 
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
                  L  +++  G  PNV T+   I  L R G    A  +F  M +        C P
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG------CGP 295

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC  G ++ AK LF++MK     PD V Y +L+       D +  K  +
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M   G  P VVTF +++D LCK R  DEA    D+M ++G+ PN  TYNTL+ G    
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+I  A +L G+MES+G +    +YNI I+ + K+ E  +A+  + +M +KGI P +V  
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L E+ ++  A  +F+ ++ +G+A D+ TY   +    K G + EAV L   +  
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             CE D+   N LID L K+GR+  AW++F  +    L P VVTYN ++ GL  +G++ K
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A +LF  M E   +P+ I+F+ L+  F + +E     ++  KM      PD    + V+ 
Sbjct: 596 AIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 566 LLVK 569
            L+K
Sbjct: 656 GLIK 659



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 269/537 (50%), Gaps = 44/537 (8%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K + +++ A G  P++ T+ IL++  CK       F  F  + +    PN  T+N+LI G
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L    RI +A  L   +++ G +P   TYN  I+   ++G T  A+  FE+M       G
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAK----G 467

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           +V  PN V  +  +  L + G + +AK +F  +++  + PD VTYN ++         +E
Sbjct: 468 IV--PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  L  EM+  G +P V+  N ++D L K  ++DEA ++ D M    + P   TYNTL+ 
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G    G++ +A ELF SM    C  + +S+N L++ +CKN EVE AL ++ +M     KP
Sbjct: 586 GLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL- 439
            V+TYNT+  GL + ++V HA   F ++++  +  D  T  T + GL K G I +A+ + 
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIA 704

Query: 440 --------FRTLR----------ILKCELD---IQAYNCLIDG--------------LCK 464
                   FR  R          +++ E+D   I A   +++G              LCK
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764

Query: 465 SGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             R  +A+++F      + + P + +YN +I  L      +KA DLF DM+    APD  
Sbjct: 765 HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF 824

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           TF+ML+    +  + +++ EL  +M  ++  PDA   +IV+  L K+    K+L  F
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 250/485 (51%), Gaps = 9/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + GL P+L TY+ L+    K     +  +    +      PN  TF   I+ L    
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCK 204
           +I EA  +F ++   GC P+++TY  LI+ LC  G    A  LF +M ANG+       K
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH-------K 329

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V Y T++D     G +D  K  + QM+ +   PDVVT+  L+  LC A D++EA   
Sbjct: 330 PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  M  QG+ P++ T+N ++  L +  ++++A +LL  M   GV+P A TYN  +D F  
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGK 449

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+  +A E F  M++ G   + V+ N  +    +   + EA +++  +   G+ P  VT
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN +     ++ QV+ A+ L  EM R+G   D     + ID L K G + EA ++F  ++
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +K    +  YN L+ GL K GR++ A ELF S+      PN +++N ++   C + +++
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVE 629

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  +F  M      PDV+T++ +I+G I+ N+ +      H++K K + PD   +  ++
Sbjct: 630 LALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLL 688

Query: 565 DLLVK 569
             LVK
Sbjct: 689 PGLVK 693



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 247/499 (49%), Gaps = 12/499 (2%)

Query: 74  LASLAKNKHYDTRLNA---TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
           LA + + +   T  N     GL P+  TYN+++ C+ K+G+V         ++R+   P+
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
               NSLI  L+   R+ EA  +F ++K     P V+TYNTL++GL + G    A+ LFE
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
            M      I   C PNT++++T++D  CK   V+ A  +F +M   +  PDV+TYN++I+
Sbjct: 602 SM------IEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA-SRLLDLMVQRGVR 309
           GL   N  N A   F   + + + P  VT   ++  L K  ++ +A S   D M Q   R
Sbjct: 656 GLIKENKVNHA-FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            N   +  LM G  +  ++++A      +   G   +D     L+   CK+K    A  +
Sbjct: 715 VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774

Query: 370 YREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           + +   K GI PT+ +YN L   L E+H  E A  LF +M+  G A D  T+   +    
Sbjct: 775 FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+G I E  EL++ +   +C+ D   YN +I  L KS  L  A + F  L      P   
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY  +I GL   G++++A  LF +M +    P+   F++LI+G+ +I +     +L  +M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 549 KEKKVMPDASIVSIVVDLL 567
             + + PD    +I+VD L
Sbjct: 955 VNEGIRPDLKSYTILVDCL 973



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 264/542 (48%), Gaps = 50/542 (9%)

Query: 58   LRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGR 111
            LR +   P   ++N+++   +K    D  +N        G  P++   N LI+   K GR
Sbjct: 498  LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 112  VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            V   +  F R+     +P   T+N+L+ GL  E R+ +A  LF  +    C PN I++NT
Sbjct: 558  VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617

Query: 172  LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
            L++  C+     +AL +F +M   +      CKP+ +TY+T+I GL KE  V+ A   F 
Sbjct: 618  LLDCFCKNDEVELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWFFH 671

Query: 232  QMKDENINPDVVTYNSLIHGLCHANDWNEA---------------KRLFIE--------- 267
            Q+K ++++PD VT  +L+ GL       +A                R F E         
Sbjct: 672  QLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVE 730

Query: 268  -MMDQGVQ-PSVVTFNVIMDE----------LCKNRKMDEASRLLDLMVQR-GVRPNACT 314
              MD+ +     +  N I  E          LCK+++   A ++ D   ++ G+ P   +
Sbjct: 731  AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790

Query: 315  YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
            YN L+     +    +A +LF  M+++GC  D  ++N+L+  + K+ ++ E   LY+EM+
Sbjct: 791  YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850

Query: 375  SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            S+  KP  +TYN +   L + + ++ AL  F ++         RTY   IDGL K G + 
Sbjct: 851  SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910

Query: 435  EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
            EA+ LF  +    C+ +   +N LI+G  K G  + A +LF  + +  + P++ +Y I++
Sbjct: 911  EAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILV 970

Query: 495  QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              LC  G++D+A   F +++     PD I ++ +I+G  +     +   L ++M+ + ++
Sbjct: 971  DCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIV 1030

Query: 555  PD 556
            PD
Sbjct: 1031 PD 1032



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 213/423 (50%), Gaps = 6/423 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+ ++ K L     + +   +  K++  G   N  +YN LI+ L ++G    AL ++  M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
            +         KP+  TYS ++  L K+   +    L  +M+D  + P+V T+   I  L
Sbjct: 219 VSEG------LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A   +EA  +F  M D+G  P +VT+ V++D LC   +++ A  L   M   G +P+ 
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             Y TL+D F   G ++  +E +  ME+ G   D V++ IL++  CK ++ +EA + +  
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI P + TYNTL  GL    ++E ALKL   M+  GV     TY  FID   K+G 
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             +AVE F  ++      +I A N  +  L + GRL+ A  +F  L    L P+ VTYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           M++     GQ+D+A +L  +M  N   PDVI  + LI    +     +  ++  +MK+ K
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 553 VMP 555
           + P
Sbjct: 573 LSP 575



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 254/541 (46%), Gaps = 45/541 (8%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
            +EA+ +FD M  M  SP  V ++N LL+ L K         A  LF         PN  +
Sbjct: 559  DEAWQMFDRMKDMKLSPT-VVTYNTLLSGLGKEGRVQ---KAIELFESMIEKKCSPNTIS 614

Query: 99   YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            +N L++CFCK   V L    F ++      P+  T+N++I GL  E+++  A   F +LK
Sbjct: 615  FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674

Query: 159  AFGCEPNVITYNTLINGLCRTGHTMIALNL----------------FEEMANGNGEIGVV 202
                 P+ +T  TL+ GL + G    A+++                +E++  G      +
Sbjct: 675  K-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEM 733

Query: 203  CKPNTVTYSTIIDGLCKE-GFVDKAKALFLQMKDE--------------NINPDVVTYNS 247
             K        +++G+C+E  F+     +  + K E               I+P + +YN 
Sbjct: 734  DKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793

Query: 248  LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            LI  L   +   +A  LF +M + G  P   TFN+++    K+ K+ E   L   M+ R 
Sbjct: 794  LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853

Query: 308  VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             +P+A TYN ++        +++A + F  + S   +    +Y  LI+G  K   +EEA+
Sbjct: 854  CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 368  SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
             L+ EM   G KP    +N L  G  +I   E A +LF  M  +G+  D ++YT  +D L
Sbjct: 914  RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973

Query: 428  CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            C  G + EA+  F  L+    + D  AYN +I+GL KS R++ A  L+  + +  +VP++
Sbjct: 974  CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033

Query: 488  VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             TYN ++  L   G +++A+ ++ +++     PDV T++ LI G+     P     +   
Sbjct: 1034 YTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKN 1093

Query: 548  M 548
            M
Sbjct: 1094 M 1094



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 250/530 (47%), Gaps = 16/530 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EAF  FD M R     P + ++N L+  L +    +  L       + G+ P  YTYNI
Sbjct: 384 DEAFATFDVM-RKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNI 442

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I+ F K G        F ++      PN    N+ +  L    R+ EA  +F  L+  G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ +TYN ++    + G    A+NL  EM   NG     C+P+ +  +++ID L K G
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR-NG-----CEPDVIVVNSLIDSLYKAG 556

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A  +F +MKD  ++P VVTYN+L+ GL       +A  LF  M+++   P+ ++FN
Sbjct: 557 RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFN 616

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  CKN +++ A ++   M     +P+  TYNT++ G     K+N A   F  ++  
Sbjct: 617 TLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK- 675

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
               D V+   L+ G  K  ++ +A+S+ R+ M     +     +  L  G     +++ 
Sbjct: 676 SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDK 735

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLI 459
           A+   +E+  +G+  +       +  LCK+   + A ++F +  + L     + +YNCLI
Sbjct: 736 AIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLI 795

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
             L +    + AW+LF  + +    P+  T+N+++      G++ +  +L+ +M      
Sbjct: 796 GELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCK 855

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           PD IT++++I    + N   K  +  + +      P       ++D L K
Sbjct: 856 PDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 178/355 (50%), Gaps = 7/355 (1%)

Query: 102  LINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            L+   CK  R    +  F +  +    +P  A++N LI  L       +A  LF  +K  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            GC P+  T+N L+    ++G       L++EM      I   CKP+ +TY+ +I  L K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEM------ISRRCKPDAITYNIVISSLAKS 871

Query: 221  GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              +DKA   F  +   +  P   TY  LI GL       EA RLF EM D G +P+   F
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 281  NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            N++++   K    + A +L   MV  G+RP+  +Y  L+D  CL G+++ A   F  ++S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 341  MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
             G   D ++YN +ING  K++ +EEAL+LY EM ++GI P + TYN+L L L     VE 
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 401  ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            A ++++E+Q  G+  D  TY   I G   +     A  +++ + +  C  +I  Y
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 182/355 (51%), Gaps = 7/355 (1%)

Query: 137  LIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
            L++ L    R + A  +F K  K  G  P + +YN LI  L    +T  A +LF++M N 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN- 816

Query: 196  NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                 V C P+  T++ ++    K G + +   L+ +M      PD +TYN +I  L  +
Sbjct: 817  -----VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKS 871

Query: 256  NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
            N+ ++A   F +++    +P+  T+  ++D L K  +++EA RL + M   G +PN   +
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 316  NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
            N L++G+  +G    A +LF  M + G + D  SY IL++  C    V+EAL  + E+ S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 376  KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
             G+ P  + YN +  GL +  ++E AL L++EM+  G+  D  TY + +  L   G + +
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 436  AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            A  ++  L++   E D+  YN LI G   S   + A+ ++ ++      PN+ TY
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 148/303 (48%), Gaps = 24/303 (7%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLNATGLF------------PNLYTYNILINCFCKIGRV 112
            P   +FN+LLA   K+         T LF            P+  TYNI+I+   K   +
Sbjct: 821  PDAFTFNMLLAVHGKSG------KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 113  SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                  F  ++ S F P   T+  LI GL    R+ EA  LF ++  +GC+PN   +N L
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 173  INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
            ING  + G T  A  LF+ M N         +P+  +Y+ ++D LC  G VD+A   F +
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 233  MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            +K   ++PD + YN +I+GL  +    EA  L+ EM ++G+ P + T+N +M  L     
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 293  MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            +++A R+ + +   G+ P+  TYN L+ G+ L      A  ++ +M   GC  +  +Y  
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQ 1108

Query: 353  LIN 355
            L N
Sbjct: 1109 LPN 1111



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 162/346 (46%), Gaps = 35/346 (10%)

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N +++ L  + K+++ + + + M ++ +R +  TY T+     + G + +   +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   +  SYN LI+   ++    EAL +YR MVS+G+KP++ TY+ L + L +    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E  + L  EM+  G+  +  T+T  I  L + G I EA E+FR +    C  D+  Y  L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 459 IDGLCKSGRLKFAWELFCSL------PHGVL----------------------------- 483
           ID LC +G+L+ A ELF  +      P  V+                             
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+VVT+ I++  LC     D+A   F  M +    P++ T++ LI G +R        +
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           LL  M+   V P A   +I +D   K+  + K++ +F   + +G V
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIV 469


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 168/546 (30%), Positives = 274/546 (50%), Gaps = 26/546 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN---KHYDTRLNAT---GLFPNLYTYNIL 102
           EA+ +F+ MLR+   P  VS+FN LL +L K    +  +  LN     G+  NL+T+NI 
Sbjct: 199 EAYELFNDMLRIGIFPD-VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C+ G +S        ++R   TP+  T+N+LI GL   S ++EA     KL   G 
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIIDGLCK 219
           EP+  TYNTLI+G C+ G    A  + +         G +CK   P+  TY ++I+GLC+
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQ---------GAICKGFVPDEFTYCSLINGLCQ 368

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              +D+A ALF     + + P V+ YN LI GLC      +A ++  EM + G    + T
Sbjct: 369 NDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWT 428

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N++++ LCK   + +A+ L++  + +G  P+  T+NTL+DG+C   K+    ++   M 
Sbjct: 429 YNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMW 488

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           S G   D ++YN ++NG  K  + E+ +  +  MV KG  P  +TYN L   L +  +V 
Sbjct: 489 SHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVN 548

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCL 458
            AL L DE+   G+  DT ++ T I G   NG +  A +LFR +    K       YN +
Sbjct: 549 EALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIM 608

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+   +   L    +LF  +  G   P+  TY +MI G C  G  D      L+M E   
Sbjct: 609 INAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGF 668

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            P + TF  +I+     +   +  +++H M    ++P+      VV+ + + +  + + P
Sbjct: 669 IPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE------VVNSISEADKKVVAAP 722

Query: 579 SFLVQE 584
             +V++
Sbjct: 723 KIVVED 728



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 245/478 (51%), Gaps = 8/478 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++ +YN ++N   + G        F R+      P+  TF   IK      R   A  L
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              + + GC+ N + Y T++ G     + + A  LF +M      IG+   P+  T++ +
Sbjct: 169 LNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML----RIGIF--PDVSTFNKL 222

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +  LCK+G V +++ L  ++  + +  ++ T+N  I GLC     + A  +   ++ +G+
Sbjct: 223 LHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGL 282

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VVT+N ++  LCKN  + EA + L  +V  G+ P+  TYNTL+DG+C MG +  AE+
Sbjct: 283 TPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEK 342

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +       G   D+ +Y  LING C+N E++ AL+L+   + KG+KPTV+ YN L  GL 
Sbjct: 343 ILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   +  AL++ +EM  +G ++D  TY   I+GLCK G + +A  L           D+ 
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVF 462

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            +N LIDG CK  +++   ++   +  HGV  P+V+TYN ++ GL    + +   + F  
Sbjct: 463 TFNTLIDGYCKQLKMETTIQILNKMWSHGV-TPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           M E    P+ IT+++L     +  + ++  +L+ ++  K + PD    + ++     N
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANN 579



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 263/524 (50%), Gaps = 14/524 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  +F+ M   +   P V S+N ++  L ++ ++        R+   G+ P++YT+ I 
Sbjct: 94  EAVDVFERM-DFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIR 152

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  FC+  R          ++      NA  + +++ G + E+  +EA  LF  +   G 
Sbjct: 153 IKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGI 212

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V T+N L++ LC+ G    +  L  ++         +C  N  T++  I GLC++G 
Sbjct: 213 FPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG-----MC-SNLFTFNIFIQGLCRKGM 266

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +  A ++   +  E + PDVVTYN+LI GLC  ++  EA++   ++++ G++P   T+N 
Sbjct: 267 LSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNT 326

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK   +  A ++L   + +G  P+  TY +L++G C   +I+RA  LF +    G
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K   + YN+LI G C+   + +AL +  EM   G    + TYN +  GL ++  V  A 
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN 446

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L ++    G   D  T+ T IDG CK   +   +++   +       D+  YN +++GL
Sbjct: 447 NLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL 506

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+ + +   E F ++     VPN +TYNI+ + LC  G++++A DL  ++      PD 
Sbjct: 507 SKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDT 566

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEK-KVMPDASIVSIVVD 565
           ++F  +I GF    +     +L  +M E+ KV    +  +I+++
Sbjct: 567 VSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMIN 610



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 232/458 (50%), Gaps = 17/458 (3%)

Query: 135 NSLIKGLH--------AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           NSL++G++         + ++ EA  +F ++  + CEP+V++YN ++N L  +G+   A 
Sbjct: 72  NSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAH 131

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +F  M N    +G+V  P+  T++  I   C+      A  L   M  +    + V Y 
Sbjct: 132 KVFLRMKN----VGIV--PDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYC 185

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +++ G    N   EA  LF +M+  G+ P V TFN ++  LCK  ++ E+ RLL+ ++++
Sbjct: 186 TVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK 245

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+  N  T+N  + G C  G ++ A  +  S+   G   D V+YN LI G CKN  V EA
Sbjct: 246 GMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEA 305

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
                ++V+ G++P   TYNTL  G  ++  +++A K+       G   D  TY + I+G
Sbjct: 306 EKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLING 365

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC+N  I  A+ LF        +  +  YN LI GLC+ G +  A ++   +       +
Sbjct: 366 LCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSD 425

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           + TYN++I GLC  G +  A +L  D       PDV TF+ LI G+ +  +     ++L+
Sbjct: 426 IWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILN 485

Query: 547 KMKEKKVMPDASIVSIVVDLL---VKNEISLKSLPSFL 581
           KM    V PD    + V++ L   VKNE  +++  + +
Sbjct: 486 KMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMV 523



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 189/401 (47%), Gaps = 20/401 (4%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL +F ++   +G      K + +TY  II  L   GF     A+   + +  ++ D   
Sbjct: 23  ALEMFNKVKREDG-----FKHSLLTYKCIIQKL---GFHGNFVAMENVLAETRMDID--- 71

Query: 245 YNSLIHGL--------CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            NSL+ G+               EA  +F  M     +PSV+++N IM+ L ++    +A
Sbjct: 72  -NSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQA 130

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            ++   M   G+ P+  T+   +  FC   + + A  L  +M S GC+ + V+Y  ++ G
Sbjct: 131 HKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAG 190

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           + +     EA  L+ +M+  GI P V T+N L   L +  +V+ + +L +++ + G+ ++
Sbjct: 191 FYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSN 250

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T+  FI GLC+ G +  A+ +  ++       D+  YN LI GLCK+  +  A +   
Sbjct: 251 LFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLH 310

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            L +G L P+  TYN +I G C  G +  A  +          PD  T+  LI+G  + +
Sbjct: 311 KLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQND 370

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           E  +   L +    K + P   + ++++  L +  + L++L
Sbjct: 371 EIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQAL 411



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 168/361 (46%), Gaps = 8/361 (2%)

Query: 225 KAKALFLQMKDEN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEM---MDQGVQPSVVTF 280
           KA  +F ++K E+     ++TY  +I  L    ++   + +  E    +D  +   V  +
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGV--Y 79

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
              M    +  K+ EA  + + M      P+  +YN +M+     G   +A ++F  M++
Sbjct: 80  IGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKN 139

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           +G   D  ++ I I  +C+ K    AL L   MVS+G +   V Y T+  G +E +    
Sbjct: 140 VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVE 199

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLI 459
           A +LF++M R G+  D  T+   +  LCK G + E+  L  + L+   C  ++  +N  I
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS-NLFTFNIFI 258

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            GLC+ G L  A  +  S+    L P+VVTYN +I GLC +  + +A      +      
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PD  T++ LI G+ ++       ++L     K  +PD      +++ L +N+   ++L  
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378

Query: 580 F 580
           F
Sbjct: 379 F 379


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/512 (31%), Positives = 254/512 (49%), Gaps = 40/512 (7%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P  +TY IL++C  +  R  L    FG++LR+    +    N L+KG     R  EA 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 152 -ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  +    GC P+V +Y+ L+  LC  G +  A +L   MA G    G VC P+ V Y
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAY 226

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA--------------- 255
           +T+ID   KEG V+KA  LF +M    I PD+VTY+S++H LC A               
Sbjct: 227 TTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVN 286

Query: 256 --------------------NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
                                 W EA R+F EM    + P VVT N++M  LCK  K+ E
Sbjct: 287 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKE 346

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  + D M  +G  P+  +Y  +++G+   G +    +LF  M   G   D  ++++LI 
Sbjct: 347 ARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIK 406

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A++ F++M   GVA 
Sbjct: 407 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 466

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D   Y   I G C +G +++A EL   +      LDI  ++ +I+ LCK GR+  A  +F
Sbjct: 467 DKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
               +    P+ V Y++++ G C  G+M+KA  +F  M      P+V+ +  L++G+ +I
Sbjct: 527 DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKI 586

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
               +   L  +M +K + P   + +I++D L
Sbjct: 587 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/489 (32%), Positives = 251/489 (51%), Gaps = 45/489 (9%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLA-----SLAKNKHYDTRLNATGL 92
           +EGD+N     +A  +F  M++    P  V+  +++ A     ++ K + +  ++   G+
Sbjct: 235 KEGDVN-----KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+ +TYN LI  +   G+       F  + R    P+  T N L+  L    +I EA  
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG--------------- 197
           +F  +   G  P+V +Y  ++NG    G  +   +LF+ M  G+G               
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLML-GDGIAPDIYTFSVLIKAY 408

Query: 198 -----------------EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                            + GV  KP+ VTY+T+I  LC+ G +D A   F QM D+ + P
Sbjct: 409 ANCGMLDKAMIIFNEMRDHGV--KPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 466

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D   Y+ LI G C      +AK L +E+M+ G++  +V F+ I++ LCK  ++ +A  + 
Sbjct: 467 DKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DL V  G  P+A  Y+ LMDG+CL+GK+ +A  +F +M S G + + V Y  L+NGYCK 
Sbjct: 527 DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKI 586

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             ++E LSL+REM+ KGIKP+ + YN +  GLF   +   A   F EM   G+A +  TY
Sbjct: 587 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTY 646

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              + G  KN    EA+ LF+ LR +  ++DI   N +I G+ ++ R++ A +LF S+  
Sbjct: 647 NIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISR 706

Query: 481 GVLVPNVVT 489
             LVP VVT
Sbjct: 707 SGLVPCVVT 715



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 234/465 (50%), Gaps = 6/465 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+L TY+ +++  CK   +        +++     P+  T+N+LI G  +  +  EA
Sbjct: 253 GIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 312

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F +++     P+V+T N L+  LC+ G    A ++F+ MA   G+      P+  +Y
Sbjct: 313 VRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSY 366

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
             +++G   +G +     LF  M  + I PD+ T++ LI    +    ++A  +F EM D
Sbjct: 367 KIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRD 426

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV+P VVT+  ++  LC+  KMD+A    + M+ +GV P+   Y+ L+ GFC  G + +
Sbjct: 427 HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 486

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+EL   + + G + D V ++ +IN  CK   + +A +++   V+ G  P  V Y+ L  
Sbjct: 487 AKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMD 546

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   + ++E AL++FD M   G+  +   Y T ++G CK G I E + LFR +     + 
Sbjct: 547 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 606

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               YN +IDGL  +GR   A   F  +    +  N  TYNI+++G   +   D+A  LF
Sbjct: 607 STILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLF 666

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            ++       D+IT + +I G  +     +  +L   +    ++P
Sbjct: 667 KELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 243/488 (49%), Gaps = 19/488 (3%)

Query: 60  MHPSP-----PPVSSFNILLASL---AKNKHYDT--RLNATG---LFPNLYTYNILINCF 106
           +H +P     P V S++ILL SL    K+   D   R+ A G     P++  Y  +I+CF
Sbjct: 174 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCF 233

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
            K G V+     F  +++    P+  T++S++  L     + +A A   ++   G  P+ 
Sbjct: 234 FKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDN 293

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            TYN LI G   TG    A+ +F+EM   +        P+ VT + ++  LCK G + +A
Sbjct: 294 WTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLNMLMGSLCKYGKIKEA 347

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + +F  M  +  NPDV +Y  +++G        +   LF  M+  G+ P + TF+V++  
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
                 +D+A  + + M   GV+P+  TY T++   C +GK++ A E F  M   G   D
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             +Y+ LI G+C +  + +A  L  E+++ G++  +V ++++   L ++ ++  A  +FD
Sbjct: 468 KYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFD 527

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
                G   D   Y+  +DG C  G + +A+ +F  +     E ++  Y  L++G CK G
Sbjct: 528 LTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIG 587

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           R+     LF  +    + P+ + YNI+I GL   G+   A+  F +M E+  A +  T++
Sbjct: 588 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYN 647

Query: 527 MLIHGFIR 534
           +++ GF +
Sbjct: 648 IVLRGFFK 655



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 195/383 (50%), Gaps = 5/383 (1%)

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C +G  + A+ LF   A+   +   V  P + TY+ ++D   +    + A A F Q+   
Sbjct: 87  CGSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 144

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDE 295
            +  D++  N L+ G C A   +EA  + +    + G  P V ++++++  LC   K  +
Sbjct: 145 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 204

Query: 296 ASRLLDLMVQRGV--RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           A  LL +M + G    P+   Y T++D F   G +N+A +LF  M   G   D V+Y+ +
Sbjct: 205 ADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 264

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ++  CK + + +A +  R+MV+KG+ P   TYN L  G     Q + A+++F EM+R  +
Sbjct: 265 VHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 324

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  T    +  LCK G I EA ++F T+ +     D+ +Y  +++G    G L    +
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD 384

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  +    + P++ T++++I+   N G +DKA  +F +M ++   PDV+T+  +I    
Sbjct: 385 LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALC 444

Query: 534 RINEPSKVNELLHKMKEKKVMPD 556
           RI +     E  ++M ++ V PD
Sbjct: 445 RIGKMDDAMEKFNQMIDQGVAPD 467



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 165/338 (48%), Gaps = 9/338 (2%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P   TY  L+     A+    A   F +++  G++  ++  N ++   C+ ++ DEA 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA- 169

Query: 298 RLLDLMVQR----GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYN 351
             LD+++ R    G  P+  +Y+ L+   C  GK  +A++L   M   G  C  D V+Y 
Sbjct: 170 --LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYT 227

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I+ + K  +V +A  L++EMV +GI P +VTY+++   L +   +  A     +M   
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK 287

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  D  TY   I G    G   EAV +F+ +R      D+   N L+  LCK G++K A
Sbjct: 288 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA 347

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++F ++      P+V +Y IM+ G    G +    DLF  M  +  APD+ TF +LI  
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +       K   + ++M++  V PD    + V+  L +
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR 445



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 38/297 (12%)

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           R + P + TY  LMD      +   A   FG +   G + D +  N L+ G+C+ K  +E
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 366 AL------------------------------------SLYREMVSKGI--KPTVVTYNT 387
           AL                                     L R M   G    P VV Y T
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +    F+   V  A  LF EM + G+  D  TY++ +  LCK   + +A    R +    
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D   YN LI G   +G+ K A  +F  +    ++P+VVT N+++  LC  G++ +AR
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           D+F  M      PDV ++ ++++G+        + +L   M    + PD    S+++
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLI 405



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 97/236 (41%), Gaps = 53/236 (22%)

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGL--------CKNGYIIEAVELF---------- 440
           E A  L DE+QR G     R    F+  L        C +G  + AV LF          
Sbjct: 50  EDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPAL-AVALFNRAASRAQGP 108

Query: 441 RTLR--------ILKC----------------------ELDIQAYNCLIDGLCKSGRLKF 470
           R L         ++ C                       +DI   N L+ G C++ R   
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 471 AWE-LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA--APDVITFDM 527
           A + L    P    VP+V +Y+I+++ LC+ G+  +A DL   M E  A  +PDV+ +  
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           +I  F +  + +K  +L  +M ++ + PD    S VV  L K   ++    +FL Q
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR-AMGKAEAFLRQ 283


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 269/538 (50%), Gaps = 40/538 (7%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           +  L K +   + +   G+ P++ TYN LI  + K+  +   +     I +   T NA  
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
             +++ GL     +  A  LF ++ ++G +PN++ Y T++ GL + G    A+ +   M 
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
           +          P+   Y+T+I G CK G +++ K+  ++M  + + P+V TY + IHG C
Sbjct: 505 DQG------LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A +   A+R FIEM+D G+ P+ V    ++D  CK+    +A      M+ +GV P+  
Sbjct: 559 RAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQ 618

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T++ L+ G    GK+  A  +F  +   G   D  +Y  LI+  CK  +++ A  L+ +M
Sbjct: 619 THSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDM 678

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KGI P +VTYN L  GL ++ ++  A +LFD +   G+A ++ TY+T I G CK+  +
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANL 738

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGV---------- 482
            EA +LF  ++++    D   Y  LIDG CK+G  + A  LF  +   G+          
Sbjct: 739 TEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALI 798

Query: 483 -----------------------LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
                                  + PN VTY I+I+  C  G + +A  LF++M++    
Sbjct: 799 DGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVM 858

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           P+V+T+  L+HG+ RI   S++  L  +M  + + PD    S++VD  +K    +K+L
Sbjct: 859 PNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKAL 916



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 165/529 (31%), Positives = 267/529 (50%), Gaps = 12/529 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++++++A L +    D  L         GL P+ Y Y  LI+ FC+  R + G   
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+   + +LI G   +S I  A  +  ++ A   + N  TY  LI+GLC+
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A +LF EM      +G+  KP+  TY+ +I+G  K   ++KA  L +++K EN+
Sbjct: 385 IGDLEKAEDLFSEMT----MMGI--KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENL 438

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             +     ++++GLCH  D   A  LF EM+  G++P++V +  I+  L K  + +EA +
Sbjct: 439 TANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIK 498

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L +M  +G+ P+   YNT++ GFC  GK+   +     M + G K +  +Y   I+GYC
Sbjct: 499 ILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  E++ A   + EM+  GI P  V    L  G  +      A   F  M   GV  D +
Sbjct: 559 RAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQ 618

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T++  I GL KNG + EA+ +F  L       D+  Y  LI  LCK G LK A+EL   +
Sbjct: 619 THSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDM 678

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + PN+VTYN +I GLC  G++ KAR+LF  + E   A + +T+  +I G+ +    
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANL 738

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           ++  +L H MK   V PD+ +   ++D   K   + K+L  FL    +G
Sbjct: 739 TEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/499 (30%), Positives = 245/499 (49%), Gaps = 7/499 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + GL PN+  Y  ++    K GR        G +     +P+   +N++I G     ++ 
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           E  +   ++ A G +PNV TY   I+G CR G    A   F EM +     G+   PN V
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS----GIA--PNDV 583

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
             + +IDG CK+G   KA A F  M D+ + PDV T++ LIHGL       EA  +F E+
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +D+G+ P V T+  ++  LCK   +  A  L D M ++G+ PN  TYN L++G C +G+I
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A ELF  +   G   + V+Y+ +I GYCK+  + EA  L+  M   G+ P    Y  L
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +    E AL LF  M  +G+A+ T  +   IDG  K G +IEA +L   +     
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHI 822

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             +   Y  LI+  C  G +K A +LF  +    ++PNV+TY  ++ G    G+  +   
Sbjct: 823 TPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFS 882

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF +M      PD + + +++   ++     K  +L+  M  + V    ++ +I++D L 
Sbjct: 883 LFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALC 942

Query: 569 KNEISLKSLPSFLVQERQG 587
           K+    + L      E+QG
Sbjct: 943 KHNNLSEVLKVLDEVEKQG 961



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 201/391 (51%), Gaps = 1/391 (0%)

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           G +G +  P+  TY+ +I+  C+ G V++ K +   M+++   P++VTY+ +I GLC A 
Sbjct: 223 GMLGAIV-PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAG 281

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           D +EA  L   M ++G+ P    +  ++D  C+ ++  E   +LD M   G++P+   Y 
Sbjct: 282 DVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYT 341

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L++GF     I  A ++   M +   K +  +Y  LI+G CK  ++E+A  L+ EM   
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           GIKP + TYN L  G +++  +E A +L  E++++ + A+       ++GLC  G +  A
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            ELF+ +     + +I  Y  ++ GL K GR + A ++   +    L P+V  YN +I G
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIG 521

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C  G+M++ +   ++M      P+V T+   IHG+ R  E         +M +  + P+
Sbjct: 522 FCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPN 581

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             I + ++D   K+  + K+   F     QG
Sbjct: 582 DVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 199/393 (50%), Gaps = 7/393 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++ T+++LI+   K G++      F  +L     P+  T+ SLI  L  E  +  A
Sbjct: 612 GVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAA 671

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   G  PN++TYN LINGLC+ G    A  LF+    G  E G+    N+VTY
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFD----GIPEKGLA--RNSVTY 725

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           STII G CK   + +A  LF  MK   + PD   Y +LI G C A +  +A  LF+ M++
Sbjct: 726 STIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE 785

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+  S   FN ++D   K  K+ EA +L++ MV   + PN  TY  L++  C +G I  
Sbjct: 786 EGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKE 844

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE+LF  M+      + ++Y  L++GY +     E  SL+ EMV++GIKP  + ++ +  
Sbjct: 845 AEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVD 904

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
              +      ALKL D+M  +GV      YT  ID LCK+  + E +++   +     +L
Sbjct: 905 AHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKL 964

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
            +     L+    ++GR   A  +  S+    L
Sbjct: 965 SLATCGTLVCCFHRAGRTDEALRVLESMVRSFL 997



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 198/401 (49%), Gaps = 14/401 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF  F  ML      P V + ++L+  L+KN          + L   GL P+++TY  L
Sbjct: 600 KAFAKFRCMLD-QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSL 658

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK G +   F     + +    PN  T+N+LI GL     I +A  LF  +   G 
Sbjct: 659 ISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGL 718

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             N +TY+T+I G C++ +   A  LF  M      +GV   P++  Y  +IDG CK G 
Sbjct: 719 ARNSVTYSTIIAGYCKSANLTEAFQLFHGMK----LVGV--PPDSFVYCALIDGCCKAGN 772

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            +KA +LFL M +E I      +N+LI G        EA +L  +M+D  + P+ VT+ +
Sbjct: 773 TEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTI 831

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C    + EA +L   M +R V PN  TY +L+ G+  +G+ +    LF  M + G
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K DD++++++++ + K     +AL L  +M+S+G+      Y  L   L + + +   L
Sbjct: 892 IKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVL 951

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           K+ DE+++ G      T  T +    + G   EA+ +  ++
Sbjct: 952 KVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 176/369 (47%), Gaps = 14/369 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
            EA  +F  +L      P V ++  L+++L K                 G+ PN+ TYN 
Sbjct: 634 QEAMGVFSELLD-KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNA 692

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN  CK+G ++     F  I       N+ T++++I G    + + EA  LF  +K  G
Sbjct: 693 LINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVG 752

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+   Y  LI+G C+ G+T  AL+LF  M     E G+   P    ++ +IDG  K G
Sbjct: 753 VPPDSFVYCALIDGCCKAGNTEKALSLFLGMV----EEGIASTP---AFNALIDGFFKLG 805

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A  L   M D +I P+ VTY  LI   C   +  EA++LF+EM  + V P+V+T+ 
Sbjct: 806 KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYT 865

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++    +  +  E   L D MV RG++P+   ++ ++D     G   +A +L   M S 
Sbjct: 866 SLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSE 925

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G       Y ILI+  CK+  + E L +  E+  +G K ++ T  TL        + + A
Sbjct: 926 GVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEA 985

Query: 402 LKLFDEMQR 410
           L++ + M R
Sbjct: 986 LRVLESMVR 994


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 256/505 (50%), Gaps = 16/505 (3%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +P P +   + LA+  +  H+       G+ P +   N+++       R       +  +
Sbjct: 170 NPAPSTCSTLCLAAFREMAHH-------GVPPFIKECNLVLRALRDEARWDDMRSVYAEM 222

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF--GCEPNVITYNTLINGLCRTG 180
           L+    P+  T+N+L+     E R+ +AA L  +++A   GC P+ +TYN +INGL R G
Sbjct: 223 LQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKG 282

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L + M           K +  T++ +I G    G V+KA AL L+M++E I P
Sbjct: 283 ELEKAAQLVDRMRMSK-------KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVP 335

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            VVTYN++IHG+  + +   A+  F+EM   G+ P ++T+N +++  CK   + EA  L 
Sbjct: 336 TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLF 395

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             + + G+ P+  TYN L+DG+C +G +  A      M   GC+ D  +Y IL+NG  K 
Sbjct: 396 GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKV 455

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + +      + EM+SKG++P    YNT       +     A +L + M   G+++DT TY
Sbjct: 456 RNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTY 515

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
             F+DGLCK+G + +A  L+  +     + D   Y CLI   C+ GRL+ A ++F  +  
Sbjct: 516 NIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLV 575

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+ VTY + I   C  G +  A   F  M E    P+ +T+++LIH   R+   + 
Sbjct: 576 SGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNL 635

Query: 541 VNELLHKMKEKKVMPDASIVSIVVD 565
             +  H+M E+ + P+    ++++D
Sbjct: 636 AYQHFHEMLERGLSPNKYTYTLLID 660



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/476 (31%), Positives = 242/476 (50%), Gaps = 15/476 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT--------RLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P + ++N LL S  +    D              G  P+  TYN++IN   + G +    
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
               R +R     +A TFN LI G  A   + +A AL  +++  G  P V+TYNT+I+G+
Sbjct: 289 QLVDR-MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM 347

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            R+G+   A   F EM      +G++  P+ +TY+++I+G CK G + +A  LF  +K  
Sbjct: 348 FRSGNVEAARMKFVEMR----AMGLL--PDLITYNSLINGYCKAGNLKEALWLFGDLKRA 401

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + P V+TYN L+ G C   D  EA+R   EM++QG QP V T+ ++M+   K R +   
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
               D M+ +G++P+   YNT +    ++G  + A +L   M S G   D V+YNI ++G
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK+  +++A  L+ +MVS G++P  +TY  L     E  ++  A  +FD M   G+   
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT FI   C+ G +  A   F+ +       +   YN LI  LC+ GR   A++ F 
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFH 641

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            +    L PN  TY ++I G C +G  ++A  L+ +M ++   PD  T + L  GF
Sbjct: 642 EMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 228/457 (49%), Gaps = 5/457 (1%)

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
           +L   AF  +      P     N +++ L  E+R  +  +++ ++   G EP+++TYNTL
Sbjct: 178 TLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTL 237

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           ++   R G    A  L  EM    G     C P+ VTY+ +I+GL ++G ++KA  L  +
Sbjct: 238 LDSFFREGRVDQAAKLLREMEARPGG----CLPSDVTYNVVINGLARKGELEKAAQLVDR 293

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+         T+N LI G        +A  L +EM ++G+ P+VVT+N I+  + ++  
Sbjct: 294 MRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGN 352

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           ++ A      M   G+ P+  TYN+L++G+C  G +  A  LFG ++  G     ++YNI
Sbjct: 353 VEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNI 412

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L++GYC+  ++EEA    +EMV +G +P V TY  L  G  ++  +    + FDEM   G
Sbjct: 413 LLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKG 472

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D   Y T I      G   EA +L   +       D   YN  +DGLCKSG LK A+
Sbjct: 473 LQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAY 532

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L+  +    L P+ +TY  +I   C  G++ +ARD+F  M  +   P  +T+ + IH +
Sbjct: 533 VLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAY 592

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            R            KM E+ V P+    ++++  L +
Sbjct: 593 CRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCR 629



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 180/377 (47%), Gaps = 36/377 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++  + ++ + +        + A GL P+L TYN LIN +CK G +      
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG + R+   P+  T+N L+ G      + EA     ++   GC+P+V TY  L+NG  +
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRK 454

Query: 179 TGHTMIALNLFEEMANGNGE-----------------------------IGVVCKPNTVT 209
             +  +    F+EM +   +                             I      +TVT
Sbjct: 455 VRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVT 514

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+  +DGLCK G +  A  L+++M  + + PD +TY  LIH  C      EA+ +F  M+
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+ PS VT+ V +   C+   +  A      M++ GVRPN  TYN L+   C MG+ N
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A + F  M   G   +  +Y +LI+G CK    EEA+ LY EM   GI P   T+N LF
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694

Query: 390 LGLFEIHQVEHALKLFD 406
            G F+  Q +HA++  +
Sbjct: 695 KG-FDEGQSKHAIQYME 710



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 3/345 (0%)

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           A F +M    + P +   N ++  L     W++ + ++ EM+  G++PS+VT+N ++D  
Sbjct: 182 AAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSF 241

Query: 288 CKNRKMDEASRLLDLMVQR--GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            +  ++D+A++LL  M  R  G  P+  TYN +++G    G++ +A +L   M  M  K 
Sbjct: 242 FREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKA 300

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
              ++N LI GY     VE+A +L  EM ++GI PTVVTYNT+  G+F    VE A   F
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM+  G+  D  TY + I+G CK G + EA+ LF  L+       +  YN L+DG C+ 
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G L+ A      +      P+V TY I++ G      +   R+ F +M      PD   +
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +  I   + +   S+  +L   M  + +  D    +I +D L K+
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKS 525


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 254/499 (50%), Gaps = 14/499 (2%)

Query: 58  LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           LR+HP+     +FN+L+       +LA      +++   GL P+  TYN L+N  C+ G 
Sbjct: 203 LRLHPNH---YTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGM 259

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +        R+ +    P  AT+N+L+        I +A  +   + AFG EP++ TYN 
Sbjct: 260 LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L  GLC+ G    A  L +EM     ++G+V  P+ VTY+T++D   K      A  L  
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEME----QLGIVS-PDVVTYNTLVDACFKCQRSSDALNLLE 374

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M+++ +   +VT+N ++ GLC      EA      M ++G+ P V+T+N ++D  CK  
Sbjct: 375 EMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAG 434

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            + +A  L+D MV+ G++ +  T NTL+   C   +   AEEL  +    G   D+VSY 
Sbjct: 435 NVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYG 494

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            ++  Y K  + E AL L+ EM+ + + P++ TYNTL  GL  + ++  A+   +E+   
Sbjct: 495 TVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEM 554

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+  D  TY   I   CK G + +A +    +     + D+   N L++GLC  GRL+ A
Sbjct: 555 GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKA 614

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +LF S        +V+TYN +IQ LC D  +D A   F DME     PDV T+++L+  
Sbjct: 615 MKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSA 674

Query: 532 FIRINEPSKVNELLHKMKE 550
                   +  ++LHK+ E
Sbjct: 675 LSEAGRSVEAQKMLHKLNE 693



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 255/512 (49%), Gaps = 15/512 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTR--------LNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P + + N +L++LA++     +        L A  L PN YT+N+L++  C  G ++   
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
               ++     +P+A T+N+L+     +  + EA  L  ++K  G  P   TYNTL++  
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            R G    A ++ E M     E      P+  TY+ +  GLC+ G VD+A  L  +M+  
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFE------PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQL 343

Query: 237 NI-NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
            I +PDVVTYN+L+         ++A  L  EM ++GV+ S+VT N+I+  LC+  +++E
Sbjct: 344 GIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEE 403

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A   L++M + G+ P+  TYNTL+D  C  G + +A  L   M   G K D  + N L+ 
Sbjct: 404 ALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLY 463

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             CK K  EEA  L R    +G  P  V+Y T+    F+ ++ E AL L+DEM +  +  
Sbjct: 464 NLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTP 523

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
              TY T I GL   G + EA++    L  +    D   YN +I   CK G L+ A++  
Sbjct: 524 SISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFH 583

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +      P+VVT N ++ GLC  G+++KA  LF    E     DVIT++ LI    + 
Sbjct: 584 NKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKD 643

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           N+          M+ + + PD    ++++  L
Sbjct: 644 NDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 239/510 (46%), Gaps = 18/510 (3%)

Query: 94  PNLYTYNILINCFCKIGRVS--LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           P+L   N +++   +    S      AF  ++     PN  TFN L+    ++  + +A 
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           +  +K++ FG  P+ +TYNTL+N  CR G    A  L   M       G+V  P   TY+
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKE----GIV--PTRATYN 283

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++    + G++ +A  +   M      PD+ TYN L  GLC A   +EA +L  EM   
Sbjct: 284 TLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQL 343

Query: 272 G-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           G V P VVT+N ++D   K ++  +A  LL+ M ++GV+ +  T+N ++ G C  G++  
Sbjct: 344 GIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQL-- 401

Query: 331 AEELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            EE  G +E M   G   D ++YN LI+  CK   V +A  L  EMV  G+K    T NT
Sbjct: 402 -EEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNT 460

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L   L +  + E A +L     + G   D  +Y T +    K      A+ L+  +   K
Sbjct: 461 LLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK 520

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
               I  YN LI GL   G+L  A +    L    LVP+  TYNI+I   C +G ++KA 
Sbjct: 521 LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAF 580

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
                M EN+  PDV+T + L++G        K  +L     EK    D    + ++  L
Sbjct: 581 QFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640

Query: 568 VKN---EISLKSLPSFLVQERQGEVGESNV 594
            K+   + +L+      V+  Q +V   NV
Sbjct: 641 CKDNDVDTALRFFADMEVRGLQPDVFTYNV 670



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 211/419 (50%), Gaps = 10/419 (2%)

Query: 150 AAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT--MIALNLFEEMANGNGEIGVVCKPN 206
           AA L    +  GC  P++   N +++ L R+  T    +L+ F  +      I +   PN
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSL------IALRLHPN 208

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             T++ ++   C +G +  A +   +M+   ++PD VTYN+L++  C      EA+ L  
Sbjct: 209 HYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA 268

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M  +G+ P+  T+N ++    +   + +A+ +++ M   G  P+  TYN L  G C  G
Sbjct: 269 RMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAG 328

Query: 327 KINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           K++ A +L   ME +G    DV +YN L++   K +   +AL+L  EM  KG+K ++VT+
Sbjct: 329 KVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH 388

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  GL    Q+E AL   + M  +G+  D  TY T ID  CK G + +A  L   +  
Sbjct: 389 NIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVR 448

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              ++D    N L+  LCK  R + A EL  + P    VP+ V+Y  ++     + + + 
Sbjct: 449 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEP 508

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           A  L+ +M +    P + T++ LI G   + + ++  + L+++ E  ++PD +  +I++
Sbjct: 509 ALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 230/513 (44%), Gaps = 88/513 (17%)

Query: 65  PPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGF-- 116
           P  +++N L+++ A+     +  D    + A G  P+L+TYN+L    C+ G+V   F  
Sbjct: 277 PTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 336

Query: 117 --------------IAFGRILRSCFT--------------------PNAATFNSLIKGLH 142
                         + +  ++ +CF                      +  T N ++KGL 
Sbjct: 337 KDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLC 396

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV- 201
            E ++ EA      +   G  P+VITYNTLI+  C+ G+   A  L +EM     ++   
Sbjct: 397 REGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTF 456

Query: 202 --------VCK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
                   +CK                    P+ V+Y T++    KE   + A  L+ +M
Sbjct: 457 TLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM 516

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               + P + TYN+LI GL       EA     E+M+ G+ P   T+N+I+   CK   +
Sbjct: 517 IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL 576

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           ++A +  + MV+   +P+  T NTLM+G CL G++ +A +LF S    G K D ++YN L
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I   CK+ +V+ AL  + +M  +G++P V TYN L   L E  +   A K+  ++   G 
Sbjct: 637 IQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG- 695

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL---------DIQAYNCLIDGLCK 464
               + Y  F     K+   +EAVE  +   + K ++         D ++YN  I  LC 
Sbjct: 696 ----KLYGRFFYPSIKSS--VEAVETGKDPEV-KSDIESVGNTQGDDQESYNKYIKELCI 748

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            G+LK A  +   +    +  +  TY  +++GL
Sbjct: 749 GGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 172/375 (45%), Gaps = 42/375 (11%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P++ TYN LI+  CK G V+  F+    ++RS    +  T N+L+  L  E R  EA
Sbjct: 415 GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L       G  P+ ++Y T++    +      AL L++EM      I     P+  TY
Sbjct: 475 EELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM------IKRKLTPSISTY 528

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I GL   G + +A     ++ +  + PD  TYN +IH  C   D  +A +   +M++
Sbjct: 529 NTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVE 588

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
              +P VVT N +M+ LC   ++++A +L +  V++G + +  TYNTL+   C    ++ 
Sbjct: 589 NSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDT 648

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCK-NKEVEEALSLYR------------------ 371
           A   F  ME  G + D  +YN+L++   +  + VE    L++                  
Sbjct: 649 ALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKS 708

Query: 372 --EMVSKGIKPTVVT---------------YNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
             E V  G  P V +               YN     L    Q++ A  + DEM + G++
Sbjct: 709 SVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMS 768

Query: 415 ADTRTYTTFIDGLCK 429
            D  TY T ++GL K
Sbjct: 769 VDNSTYITLMEGLIK 783



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 163/358 (45%), Gaps = 53/358 (14%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSF--NILLASLAKNKHYDTR---LNAT---GLFPNLYTYN 100
           +AF + D M+R   S   + +F  N LL +L K K Y+     L A    G  P+  +Y 
Sbjct: 438 KAFVLMDEMVR---SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYG 494

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            ++  + K  +       +  +++   TP+ +T+N+LIKGL    ++ EA     +L   
Sbjct: 495 TVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEM 554

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+  TYN +I+  C+ G    A     +M   +       KP+ VT +T+++GLC  
Sbjct: 555 GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS------FKPDVVTCNTLMNGLCLY 608

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G ++KA  LF    ++    DV+TYN+LI  LC  ND + A R F +M  +G+QP V T+
Sbjct: 609 GRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTY 668

Query: 281 NVIMDELCKNRKMDEASRLLDLM---------------------VQRGVRP--------- 310
           NV++  L +  +  EA ++L  +                     V+ G  P         
Sbjct: 669 NVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESV 728

Query: 311 ------NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
                 +  +YN  +   C+ G++  A+ +   M   G   D+ +Y  L+ G  K ++
Sbjct: 729 GNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 167/532 (31%), Positives = 262/532 (49%), Gaps = 24/532 (4%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNA---TGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           P    S + +L  L  +   D  L         P L T N+L+  FC  G+V        
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLR 236

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK------AFGCEPNVITYNTLIN 174
            +      P+  ++ +++ GL    R+ EA  LF   +      +    P++  YN +I 
Sbjct: 237 AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVIL 296

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GLC+      A+ +FE+M   N        P++ +Y  +IDGL K G ++ A+ LF ++ 
Sbjct: 297 GLCQNDRIDEAVQMFEKMNERN------VSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
              + P  V Y SLIHGLC AN +++A+ LF +M  +G  PS VT+NV++D  CK   ++
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L+  M++ G  P+  TYNT+MDG C   ++  A  LF  ME +GC  +  S+N +I
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470

Query: 355 NGYCKNKEVE---------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
            G C+  +++         EA  L + M   G  P VVTY+TL  GL  I +V+ A  L 
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           ++M +        T  T I GLCK G I EA E+   +       D+  YN L+ G C++
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G+ + A EL   +    L PNVVTY  ++ GLC   ++ +A  +F  M+ +  AP++ T+
Sbjct: 591 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 650

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             LI GF    +     +L  +M    + PD  +   +   L K+  S ++L
Sbjct: 651 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 702



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 170/540 (31%), Positives = 268/540 (49%), Gaps = 29/540 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFP--NLYTYNILINC 105
           +EA  + D M R    PP  ++ + L   L      +       + P  N   YNI++  
Sbjct: 96  DEAELVMDEM-RSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVA 154

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAA-TFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
            CK  RV    +   R +     P AA + +S++ GL    RI EA  ++ + +    EP
Sbjct: 155 LCKAARVD-DALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EP 210

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
            ++T N L+ G C  G    A  L   M +        C P+ V+Y T++DGLCK G V+
Sbjct: 211 CLVTLNVLLEGFCSRGQVDKARELLRAMPDEE------CAPDEVSYCTVLDGLCKAGRVE 264

Query: 225 KAKALF------LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           +A  LF            +  P +  YN +I GLC  +  +EA ++F +M ++ V P   
Sbjct: 265 EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSW 324

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           ++ +++D L K  K+++A  L   ++  GV P+   Y +L+ G C+    + A ELF  M
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 384

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              GC    V+YN++I+  CK   +EEA  L ++M+  G  P VVTYNT+  GL +  +V
Sbjct: 385 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 444

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV------ELFRTLRILKCE--- 449
           E AL LF+EM+R G   + R++ T I GLC+   I +A       E FR L+ +  +   
Sbjct: 445 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV 504

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+  Y+ LI GLC   R+  A  L   +      P VVT N +I GLC  G++ +AR++
Sbjct: 505 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M  +  +PDV+T++ L+HG  R  +  +  ELL  M  + + P+    + +V  L K
Sbjct: 565 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 624



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 242/493 (49%), Gaps = 58/493 (11%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           +  +NI++  L +N   D       ++N   + P+ ++Y ILI+   K G+++     F 
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP---------------- 164
           ++L S  TP+   + SLI GL   +   +A  LF  +   GC P                
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407

Query: 165 -------------------NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
                              +V+TYNT+++GLC++     AL LF EM        + C P
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER------LGCTP 461

Query: 206 NTVTYSTIIDGLCKE---------GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           N  +++TII GLC++         G +D+A  L  +M D+   PDVVTY++LI GLC   
Sbjct: 462 NRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 521

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             ++A+ L  +M+ +  +P+VVT N ++  LCK  ++ EA  +LD MV  G  P+  TYN
Sbjct: 522 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 581

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           TL+ G C  G+  RA EL   M + G   + V+Y  L++G CK   + EA  ++ +M S 
Sbjct: 582 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 641

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P + TY  L LG     QV+  LKLF EM   G++ D   Y T    LCK+G    A
Sbjct: 642 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 701

Query: 437 VELFRTLR-ILKCE-LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           +E+ R  R  L+ E    + Y   +DGL ++G+++ A      +  G  +P       ++
Sbjct: 702 LEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 761

Query: 495 QGLCNDGQMDKAR 507
            GLC  GQ  +AR
Sbjct: 762 AGLCKSGQGGEAR 774



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 219/430 (50%), Gaps = 15/430 (3%)

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L  YNI+I   C+  R+      F ++     +P++ ++  LI GL    ++ +A  LF 
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           KL   G  P+ + Y +LI+GLC       A  LF +M N  G     C P+ VTY+ +ID
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG-----CPPSPVTYNVMID 401

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
             CK G +++A  L  +M ++   PDVVTYN+++ GLC ++   EA  LF EM   G  P
Sbjct: 402 ASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTP 461

Query: 276 SVVTFNVIM---------DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +  + N I+         D+ C+  K+DEA RLL  M   G  P+  TY+TL+ G C + 
Sbjct: 462 NRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 521

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A  L   M    CK   V+ N LI+G CK   ++EA  +   MVS G  P VVTYN
Sbjct: 522 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 581

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G     Q E A +L  +M   G+A +  TYT  + GLCK   + EA  +F  ++  
Sbjct: 582 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 641

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  ++  Y  LI G C +G++    +LF  +    + P+ V Y  +   LC  G+  +A
Sbjct: 642 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 701

Query: 507 RDLFLDMEEN 516
            ++  +  E+
Sbjct: 702 LEILREGRES 711



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/573 (25%), Positives = 237/573 (41%), Gaps = 108/573 (18%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+FP    +  +I  +C +GR       F  ++  C +P    +N LI  L         
Sbjct: 5   GIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAV 63

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN---------------- 194
             +   +   GC P+  T+ T++ GLC+ G    A  + +EM +                
Sbjct: 64  KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123

Query: 195 ----GNGE-----IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI------- 238
               G+ E     + ++   N+  Y+ ++  LCK   VD A  L   M ++ I       
Sbjct: 124 LCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSL 183

Query: 239 -------------------------NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
                                     P +VT N L+ G C     ++A+ L   M D+  
Sbjct: 184 DSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEEC 243

Query: 274 QPSVVTFNVIMDELCK-----------------------------------------NRK 292
            P  V++  ++D LCK                                         N +
Sbjct: 244 APDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +DEA ++ + M +R V P++ +Y  L+DG    GK+N A  LF  +   G     V+Y  
Sbjct: 304 IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+G C     ++A  L+ +M  +G  P+ VTYN +     +   +E A  L  +M  DG
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS------- 465
              D  TY T +DGLCK+  + EA+ LF  +  L C  + +++N +I GLC+        
Sbjct: 424 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 483

Query: 466 --GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G+L  A+ L   +     VP+VVTY+ +I GLC+  ++D AR L  DM +    P V+
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           T + LIHG  +     +  E+L  M      PD
Sbjct: 544 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 576



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 224/465 (48%), Gaps = 20/465 (4%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P    F S+I+G     R  EA  +F+ ++     P    YN LI+ L +   T     +
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEAVKKM 66

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            + M +        C P++ T++TI+ GLCK G +D+A+ +  +M+   I P   T + L
Sbjct: 67  VQVMVDRG------CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
            H LC       A +L +E+M      +   +N+++  LCK  ++D+A  L   M ++ +
Sbjct: 121 AHELCLRGSMERAFQL-LEIMPVA---NSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
              A + ++++ G    G+I+ A +++       C    V+ N+L+ G+C   +V++A  
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCL---VTLNVLLEGFCSRGQVDKARE 233

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ------RDGVAADTRTYTT 422
           L R M  +   P  V+Y T+  GL +  +VE A++LF + +              R Y  
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNI 293

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I GLC+N  I EAV++F  +       D  +Y  LIDGL K+G+L  A  LF  L H  
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSG 353

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+ V Y  +I GLC     D AR+LF DM      P  +T++++I    +     +  
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEAC 413

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +L+ KM E   +PD    + V+D L K+    ++L  F   ER G
Sbjct: 414 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 458



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 131/267 (49%), Gaps = 8/267 (2%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M Q+G+ P    + +++ G+C +G+   A ++F  ME     + DV YN+LI+   K +E
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV-YNVLIDSLSKRQE 59

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            E    + + MV +G  P   T+ T+  GL +  +++ A  + DEM+   +     T + 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
               LC  G +  A +L   + +     +  AYN ++  LCK+ R+  A EL  ++    
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPV----ANSSAYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           +     + + ++ GL + G++D+A  ++    EN   P ++T ++L+ GF    +  K  
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVY---RENRREPCLVTLNVLLEGFCSRGQVDKAR 232

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ELL  M +++  PD      V+D L K
Sbjct: 233 ELLRAMPDEECAPDEVSYCTVLDGLCK 259



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 103/252 (40%), Gaps = 55/252 (21%)

Query: 65  PPVSSFNILLASLAKN---KHYDTRLNA---TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N L+  L K    K     L+A   +G  P++ TYN L++  C+ G+       
Sbjct: 540 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 599

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     PN  T+ +L+ GL   +R+ EA  +F ++K+ GC PN+ TY  LI G C 
Sbjct: 600 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 659

Query: 179 TGHTMIALNLFEEMANGNGEIGVVC---KPNTVTYSTIIDGLCKEGFVDKAKALFLQ--- 232
            G     L LF EM         VC    P+ V Y T+   LCK G   +A  +  +   
Sbjct: 660 AGQVDGGLKLFGEM---------VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 710

Query: 233 -MKDENINPDVVTYN---------------------------------SLIHGLCHANDW 258
            ++ E    +V  +                                  SL+ GLC +   
Sbjct: 711 SLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 770

Query: 259 NEAKRLFIEMMD 270
            EA+ +  E+MD
Sbjct: 771 GEARAVLEEIMD 782


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 276/537 (51%), Gaps = 28/537 (5%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------------GLFP 94
           P+ AF IF  M R+   P  ++  N LL SL +   Y +  + +            G+ P
Sbjct: 151 PHHAFQIFKKMKRLRLRPNLLTC-NTLLNSLVR---YPSSHSVSFSREAFNDAIKLGIVP 206

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ T+NI+I  +C   +          + +   +P+  T+N+++  L  + R+ +A  L 
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLL 266

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +K+ G  PN  TYN L+ G C+ G    A N+ E M   N        P+  TY+ +I
Sbjct: 267 MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVWTYNMLI 320

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +GLC EG +++A  L  +M++  + PDVV+YN+LI+G    +  +EA +L  EM ++GV+
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+ VT N+++   CK  KMD+AS  +  M + G  P+  TYNTL++G+C  G +  A   
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA--- 437

Query: 335 FGSMESMGCKH---DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           F +M+ MG K+   D V+ N ++   C+ K++EEA  L      +G     V+Y TL +G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            F+   V+ ALKL+DEM+   +   T TY   I GLC+ G   +A+     L       D
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YN ++ G C+ G ++ A++    +      P+V T NI+++GLC +G ++KA  LF 
Sbjct: 558 ETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFN 617

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
                  A D +T++ LI    +         LL +M+EK++ PD    + ++  L 
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 256/526 (48%), Gaps = 16/526 (3%)

Query: 71  NILLASLAKNKHYDTRLNATGLF-PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
           ++LL  +A ++ +D  L+   L  P+    +  I  + + G+    F  F ++ R    P
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRP 168

Query: 130 NAATFNSLIKGL------HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           N  T N+L+  L      H+ S   EA   F      G  PNV T+N +I G C      
Sbjct: 169 NLLTCNTLLNSLVRYPSSHSVSFSREA---FNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A+     M   N      C P+ VTY+TI+D LCK+G +  A+ L + MK   + P+  
Sbjct: 226 DAVEFLNVMGKYN------CSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRN 279

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYN L++G C      EA  +   M    + P V T+N++++ LC   +++EA +L D M
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
               + P+  +YNTL++G     KI+ A +L   M   G K + V++NI++  YCK  ++
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM 399

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A +   +M   G  P  VTYNTL  G  +   +  A +  DEM R  +  D+ T  T 
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +  LC+   + EA +L  + R     +D  +Y  LI G  K G +  A +L+  +    +
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+ VTYN +I GLC  G+ ++A     ++ E+   PD  T++ ++HG+ R  +  K  +
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
             +KM E    PD    +I++  L    +  K+L  F     +G+ 
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKA 625



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 244/543 (44%), Gaps = 57/543 (10%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNILI 103
           +A    + M + + SP  V+   IL A   K +  D R     + + GL PN  TYNIL+
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             +CK+G +         + ++   P+  T+N LI GL  E RI EA  L  +++     
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV---------CK---------- 204
           P+V++YNTLING         A  L EEM+    +   V         CK          
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 205 ----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                     P+ VTY+T+I+G CK G + +A     +M  +N+  D VT N+++  LC 
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                EA +L      +G     V++  ++    K+  +D A +L D M ++ + P+  T
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN ++ G C  GK  +A      +   G   D+ +YN +++GYC+  +VE+A   + +MV
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
               KP V T N L  GL     +E ALKLF+     G A DT TY T I  LCK G + 
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS------LPHGVL----- 483
           +A  L   +   +   D   YN +I  L  SGR++ A E          LP  VL     
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXN 705

Query: 484 ------------VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
                         + V Y+  I+ LC +G+   A  +F + ++     D  T+  L+ G
Sbjct: 706 ETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765

Query: 532 FIR 534
            I+
Sbjct: 766 LIK 768



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 36/274 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASL---AKNKHYDTRLNA---TGLFPNLYTYNI 101
           + A  ++D M      P  V+ +N ++  L    K +   ++LN    +GL P+  TYN 
Sbjct: 505 DRALKLWDEMKEKEIIPSTVT-YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++ +C+ G V   F    +++ + F P+  T N L++GL  E  + +A  LF    + G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              + +TYNTLI  LC+ G    A NL  EM     E+G    P+  TY+ II  L   G
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK--ELG----PDHYTYNAIITALTDSG 677

Query: 222 FVDKAKALFLQMKDENINPD-----------------------VVTYNSLIHGLCHANDW 258
            + +A+    +M ++   P                         V Y+  I  LC    +
Sbjct: 678 RIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKY 737

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            +A R+F E   +G+     T+  +MD L K RK
Sbjct: 738 KDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 178/579 (30%), Positives = 274/579 (47%), Gaps = 68/579 (11%)

Query: 26  SSLLVHFR----DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS-SFNILLASLAKN 80
           S  L H R    D+  R+G ++     +A  + D ML+     PP S + +I+ ++L+K 
Sbjct: 188 SRRLTHIRNILIDVLFRKGRVD-----DALHLLDEMLQPKAEFPPNSNTGHIVFSALSKR 242

Query: 81  KHYD------------TRLNATGLFPNLYTYNILINCFCKIGR------VSLGFIAFGRI 122
                           ++     +FPN      LI+  C+ GR      V  G +  G +
Sbjct: 243 DKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGV 302

Query: 123 LR--SC---------------------------FTPNAATFNSLIKGLHAESRIMEAAAL 153
           +   SC                             PN  TF  LI  L    R+ EA  +
Sbjct: 303 MEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEV 362

Query: 154 FTKLKA-----FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           F K+       F  EP+VITYNTLI+GLC+ G     L L E M +        C PNTV
Sbjct: 363 FEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPR-----CMPNTV 417

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +IDG CK   ++ A+ LF QM  + + P+VVT N+L+ G+C     N A   F EM
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM 477

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G++ + VT+  ++   C    +++A  L D M++ G  P+A  Y TL+ G    GK+
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL 537

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           +RA  +   M+  G   D VS+N+LING+C+  +++EA  + +EM + GIKP  VTYNTL
Sbjct: 538 DRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTL 597

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILK 447
                +      A +L  +M ++G+     TY   I   C NG + EA+++FR +    K
Sbjct: 598 ISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   YN LI+ LC+  ++  A  L   +    + PN  T+N M +GL     + KA 
Sbjct: 658 VPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAF 717

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +L   M E+A  PD IT ++L      + E +K+   + 
Sbjct: 718 ELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 238/495 (48%), Gaps = 24/495 (4%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRIL--RSCFTPNAATFNSLIKGLHAESRIMEAA--- 151
           +  NILI+   + GRV         +L  ++ F PN+ T + +   L    ++  A    
Sbjct: 193 HIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEE 252

Query: 152 ---ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
               L +K       PN I    LI+ LCR+G T  A ++     +G  ++G V +    
Sbjct: 253 EIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVL----HGLMKLGGVME--AA 306

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           + + ++  L +     +   L  +MK+ +I P+VVT+  LI+ LC     +EA  +F E 
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF-EK 365

Query: 269 MDQG------VQPSVVTFNVIMDELCKNRKMDEASRLLDLM-VQRGVRPNACTYNTLMDG 321
           M+ G      V+P V+T+N ++D LCK  + +E   L++ M  Q    PN  TYN L+DG
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +C    I  A ELF  M   G   + V+ N L++G CK+  +  A+  + EM  KG+K  
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            VTY  L      ++ +E A++LFDEM   G + D   Y T I GL + G +  A  +  
Sbjct: 486 AVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLS 545

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            ++      DI ++N LI+G C+  +L  A+E+   + +  + P+ VTYN +I      G
Sbjct: 546 KMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE-KKVMPDASIV 560
               A  L   M +    P V+T+  LIH +       +  ++   M    KV P+  I 
Sbjct: 606 DFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIY 665

Query: 561 SIVVDLLV-KNEISL 574
           +I+++ L  KN++ L
Sbjct: 666 NILINSLCRKNQVDL 680


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/473 (32%), Positives = 255/473 (53%), Gaps = 6/473 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++LI  + +  ++  G  AF  + +  F  +    N+L+  +     +  A  ++    
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G   NV T N ++N LC+ G          EM     E GV    + VTY+T+++  C
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEME----EKGVYA--DLVTYNTLVNAYC 270

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           + G V +A  L   M  + + P + TYN+LI+GLC    +  AKR+  EM+  G+ P+  
Sbjct: 271 RRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFN ++ E C+   + EA R+ + M+QRGV P+  ++++++  F   G++ RA   F  M
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           + +G   D V Y ILINGYC+N +V  AL +  EMV +G    VVTYNTL  GL     +
Sbjct: 391 KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKML 450

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A +LF EM   GV  D  T TT I G CK+G + +A+ LF T+ +   + D+  YN L
Sbjct: 451 DDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 510

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +DG CK G ++ A EL+  +    + P+ ++++I+I G C+ G + +A  L+ +M+E   
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 570

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            P ++T + +I G++R    SK N+ L+ M  + V PD    + +++  VK E
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEE 623



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/496 (30%), Positives = 256/496 (51%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L K+   D      + +   G++ +L TYN L+N +C+ G VS  F    
Sbjct: 224 VYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVD 283

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P   T+N+LI GL  E     A  +  ++   G  PN  T+N ++   CR  
Sbjct: 284 CMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKE 343

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  +F EM     + GVV  P+ +++S+I+    + G + +A A F +MK   + P
Sbjct: 344 DVWEAERVFNEML----QRGVV--PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVP 397

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI+G C  +D + A ++  EM+++G    VVT+N +++ LC+ + +D+A  L 
Sbjct: 398 DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             MV+RGV P+  T  TL+ G+C  G + +A  LF +M     K D V+YN L++G+CK 
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKV 517

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+E+A  L+ +M+S+ I P+ ++++ L  G   +  V  A +L+DEM+  G+     T 
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I G  + G + +A +   T+       D   YN LI+   K      A+ L  ++  
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEE 637

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L+PN+VTYN ++ G    G+M +A  +   M +    PD  T+  LI+G++  +   +
Sbjct: 638 RGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKE 697

Query: 541 VNELLHKMKEKKVMPD 556
              +  +M ++  +PD
Sbjct: 698 AFRVHDEMLQRGFVPD 713



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 236/457 (51%), Gaps = 6/457 (1%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N L+    K+G V L +  +   ++S    N  T N ++  L  + ++       ++++ 
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G   +++TYNTL+N  CR G    A  L + MA G G      KP   TY+ +I+GLCK
Sbjct: 253 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMA-GKG-----LKPGLFTYNALINGLCK 306

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG  ++AK +  +M    + P+  T+N ++   C   D  EA+R+F EM+ +GV P +++
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F+ I+    +N ++  A    + M   G+ P+   Y  L++G+C    ++ A ++   M 
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC  D V+YN L+NG C+ K +++A  L++EMV +G+ P   T  TL  G  +   + 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL LF+ M    +  D  TY T +DG CK G + +A EL+  +   +      +++ LI
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G C  G +  A+ L+  +    + P +VT N +I+G    G + KA D    M      
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           PD IT++ LI+ F++     +   L++ M+E+ ++P+
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPN 643



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 264/530 (49%), Gaps = 16/530 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           +EAF     +LR       +++ N LL ++ K    D           +G   N+YT NI
Sbjct: 174 SEAF----QLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNI 229

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  CK G++    +    +       +  T+N+L+        + EA  L   +   G
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P + TYN LINGLC+ G    A  + +EM      +GV   PN  T++ ++   C++ 
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEM------LGVGLCPNAATFNPMLVESCRKE 343

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A+ +F +M    + PD+++++S++       +   A   F +M   G+ P  V + 
Sbjct: 344 DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYT 403

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++++  C+N  +  A ++ + MV+RG   +  TYNTL++G C    ++ A+ELF  M   
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  +   LI+GYCK+  + +ALSL+  M  + +KP VVTYNTL  G  ++ ++E A
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L+ +M    +     +++  I+G C  G + EA  L+  ++    +  +   N +I G
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             ++G L  A +   ++    + P+ +TYN +I     +   D+A  L  +MEE    P+
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPN 643

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++T++ ++ GF R     +   +LHKM +K + PD S  + +++  V  +
Sbjct: 644 LVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKD 693



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 198/376 (52%), Gaps = 13/376 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
           EA  +F+ ML+     P + SF+ ++   ++N        Y  ++   GL P+   Y IL
Sbjct: 347 EAERVFNEMLQ-RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTIL 405

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN +C+   VS        ++      +  T+N+L+ GL     + +A  LF ++   G 
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  T  TLI+G C+ G+   AL+LFE M   +       KP+ VTY+T++DG CK G 
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS------LKPDVVTYNTLMDGFCKVGE 519

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++KAK L+  M    I P  ++++ LI+G C     +EA RL+ EM ++G++P++VT N 
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I+    +   + +A+  L+ M+  GV P+  TYNTL++ F      +RA  L  +ME  G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + V+YN ++ G+ ++  ++EA  +  +M+ KGI P   TY +L  G      ++ A 
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699

Query: 403 KLFDEMQRDGVAADTR 418
           ++ DEM + G   D +
Sbjct: 700 RVHDEMLQRGFVPDDK 715



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 155/339 (45%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VV ++ LI     A    E    F  +  +G   S+   N ++  + K   +D A ++ +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
             V+ G   N  T N +++  C  GK++        ME  G   D V+YN L+N YC+  
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V EA  L   M  KG+KP + TYN L  GL +    E A ++ DEM   G+  +  T+ 
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             +   C+   + EA  +F  +       D+ +++ ++    ++G L  A   F  +   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            LVP+ V Y I+I G C +  +  A  +  +M E     DV+T++ L++G  R       
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +EL  +M E+ V PD   ++ ++    K+    K+L  F
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF 492



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 114/243 (46%), Gaps = 3/243 (1%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V +++LI  Y + +++ E    ++ +  +G   ++   N L   + ++  V+ A K++++
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
             + G   +  T    ++ LCK+G +         +       D+  YN L++  C+ G 
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A+ L   +    L P + TYN +I GLC +G  ++A+ +  +M      P+  TF+ 
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           ++    R  +  +   + ++M ++ V+PD    S +V +  +N    ++L  F   E+  
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF---EKMK 391

Query: 588 EVG 590
            VG
Sbjct: 392 GVG 394


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 259/511 (50%), Gaps = 22/511 (4%)

Query: 8   NRSFSFASAPISAFRSNFSSLLV---HFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           N   +FA A ++A  +      V     R L  R GD+      EA  + + M  + PS 
Sbjct: 39  NSRLNFAHAGVAASPNAVPHRAVSNDRLRGLV-RRGDLE-----EALRLVESMSGLEPSA 92

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
            P     ++    A  +  + R       P++  YN ++  +C  G++     A  R++ 
Sbjct: 93  APGPCAALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLD----AARRLVA 148

Query: 125 SC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                P++ T+N+LI+GL    R   A  +   +   GC P+V+TY  L+   C+     
Sbjct: 149 DMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYK 208

Query: 184 IALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            A+ L +EM A G       C P+ +TY+ +++G+C+EG VD A      +      P+ 
Sbjct: 209 QAMKLLDEMRAKG-------CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNT 261

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V+YN ++ GLC A  W +A++L  EM  +G  P+VVTFN+++  LC+   ++ A  +LD 
Sbjct: 262 VSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ 321

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           + + G  PN+ +YN ++  FC   K++RA      M S GC  D VSYN L+   C+  E
Sbjct: 322 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGE 381

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V+ A+ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM   G+  D  TY+T
Sbjct: 382 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
              GLC+   I EA+  F  ++ +    +   YN ++ GLCK      A +LF  +    
Sbjct: 442 ISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +PN  TY I+I+GL  +G + +AR+L  ++
Sbjct: 502 CMPNESTYTILIEGLTYEGLVKEARELLGEL 532



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 235/466 (50%), Gaps = 14/466 (3%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI   C  GR +       R+L +C  P+   +N+++ G     ++  A  L   +    
Sbjct: 100 LIKKLCASGRTAEAR----RVLAAC-EPDVMAYNAMVAGYCVTGQLDAARRLVADMPM-- 152

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+  TYNTLI GLC  G T  AL + ++M          C P+ VTY+ +++  CK  
Sbjct: 153 -EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG------CVPDVVTYTILLEATCKRS 205

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              +A  L  +M+ +   PD++TYN +++G+C     ++A      +   G +P+ V++N
Sbjct: 206 GYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYN 265

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  LC   + ++A +L+  M Q+G  PN  T+N L+   C  G +  A E+   +   
Sbjct: 266 IVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKY 325

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  + +SYN +++ +CK K+++ A++    MVS+G  P +V+YNTL   L    +V+ A
Sbjct: 326 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAA 385

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++L  +++  G      +Y T IDGL K G   EA+EL   +     + DI  Y+ +  G
Sbjct: 386 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSG 445

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC+  R++ A   FC +    + PN V YN ++ GLC   +   A DLF+ M  N   P+
Sbjct: 446 LCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPN 505

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             T+ +LI G        +  ELL ++  + V+    I    + LL
Sbjct: 506 ESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLL 551



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 218/455 (47%), Gaps = 18/455 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT--YNTLINGLCRTGHTMIAL 186
           P+ A  N  ++GL     + EA  L   +   G EP+        LI  LC +G T  A 
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRTAEAR 114

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +              C+P+ + Y+ ++ G C  G +D A+ L   M  E   PD  TYN
Sbjct: 115 RVL-----------AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYN 160

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LI GLC       A  +  +M+ +G  P VVT+ ++++  CK     +A +LLD M  +
Sbjct: 161 TLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+  TYN +++G C  G+++ A E   S+ S GC+ + VSYNI++ G C  +  E+A
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L  EM  KG  P VVT+N L   L     VE A+++ D++ + G   ++ +Y   +  
Sbjct: 281 EKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHA 340

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            CK   +  A+     +    C  DI +YN L+  LC+ G +  A EL   L      P 
Sbjct: 341 FCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 400

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +++YN +I GL   G+  +A +L  +M      PD+IT+  +  G  R +   +      
Sbjct: 401 LISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFC 460

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
           K+++  + P+  + + ++  L K   +  ++  F+
Sbjct: 461 KVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFI 495



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 10/146 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S+N ++  L K       L         GL P++ TY+ + +  C+  R+     A
Sbjct: 399 PVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRA 458

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++      PN   +N+++ GL        A  LF  + + GC PN  TY  LI GL  
Sbjct: 459 FCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTY 518

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCK 204
            G    A  L  E+ +     GVV K
Sbjct: 519 EGLVKEARELLGELCSR----GVVSK 540


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/483 (31%), Positives = 260/483 (53%), Gaps = 18/483 (3%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           P E++ + + M+    +P  V +FN ++   A++ + +        +  +G  P+  +Y+
Sbjct: 26  PEESYKVLEEMMAAGCNPD-VFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 84

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI+   KIG++         ++    TP+   ++SL++ L    R+  A++LF ++   
Sbjct: 85  ILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRG 144

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+ + +  LI GLC+ G    A   F++M          C+PN   Y+ ++ GLC  
Sbjct: 145 GHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG------CQPNVPVYNVLLHGLCSS 198

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A  LF +MK  + +PDVVTYN+L+  +C A    E  +LF  M   G  P+V+TF
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++  LC+  ++++A  +   M++ G +PN  TY TL+ G C   K+ +A ELF  M  
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVE 399
                D V+YN LI GYCK   ++EA  LYREM    G++PT+VT+NTL  G  ++ ++ 
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A +L  EM   G+AAD+ TY   I GL +   + EA+E+++ +R  K  LD  +    +
Sbjct: 379 RANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 438

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            GLCK+G +  A+ +F +      VPN  T+ I+ + L   G+++ A+ L     E A A
Sbjct: 439 GGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM----EPAKA 494

Query: 520 PDV 522
            D+
Sbjct: 495 RDI 497



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 228/439 (51%), Gaps = 8/439 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  T++S+IK L  E++  E+  +  ++ A GC P+V  +N ++ G  R+ +   A  ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           + M           KP+ V+Y  +I GL K G +D++  +  +M      P +  Y+SL+
Sbjct: 69  QHMVESG------YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
             L  A   + A  LF EM+  G  P  + F  ++  LC+  K+ +AS     M + G +
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN   YN L+ G C  G++ +A  LF  M+S  C  D V+YN L++  CK + VEE   L
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  M + G  P V+T++TL  GL    ++E AL++F  M   G   +  TYTT I GLC+
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVV 488
              +I+A ELF  +       D  AYN LI G CK G +  A +L+  +  G  L P +V
Sbjct: 303 AEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV 362

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           T+N +I G C  G++ +A +L  +M     A D  T+ +LI G  R  +  +  E+  +M
Sbjct: 363 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM 422

Query: 549 KEKKVMPD-ASIVSIVVDL 566
           +EKK + D  S VS V  L
Sbjct: 423 REKKFLLDPVSCVSFVGGL 441



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 7/466 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P+++ +N ++  F +   +      +  ++ S + P+  +++ LI GL    ++ 
Sbjct: 38  AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLD 97

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           E+  + +++   G  P++  Y++L+  L +      A +LF+EM  G         P+ +
Sbjct: 98  ESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH------PDRL 151

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            +  +I GLC+ G V  A   F QM      P+V  YN L+HGLC +    +A  LF EM
Sbjct: 152 MFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                 P VVT+N ++D +CK R+++E  +L + M   G  PN  T++TL+ G C  G++
Sbjct: 212 KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGEL 271

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A E+FGSM   GCK +  +Y  LI+G C+ ++V +A  L+ +M    I P  V YN+L
Sbjct: 272 EKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSL 331

Query: 389 FLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
             G  +   ++ A KL+ EM    G+     T+ T IDG CK G +  A EL   +    
Sbjct: 332 IAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 391

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D   Y  LI GL ++ +L  A E++  +     + + V+    + GLC  G +D+A 
Sbjct: 392 LAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 451

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
            +F    ++ A P+  TF +L    I++       +L+   K + +
Sbjct: 452 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 236/476 (49%), Gaps = 7/476 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N++TY+ +I    K  +    +     ++ +   P+   FN +++G    + + +A  ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +   G +P+ ++Y+ LI+GL + G    +L +  EM    G+      P+   YS+++
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVM-RGQT-----PSMQAYSSLV 122

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             L K   VD A +LF +M     +PD + +  LI GLC A    +A   F +M   G Q
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+V  +NV++  LC + ++++A+ L   M      P+  TYNTL+D  C   ++    +L
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F +M + G   + ++++ LI+G C+  E+E+AL ++  M+  G KP   TY TL  GL  
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI-LKCELDIQ 453
             +V  A +LF++M +  +  D   Y + I G CK G + EA +L+R +      +  I 
Sbjct: 303 AEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV 362

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LIDG CK G+L  A EL   +    L  +  TY I+I GL    ++D+A +++  M
Sbjct: 363 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM 422

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            E     D ++    + G  +     +   +    ++   +P+     I+ + L+K
Sbjct: 423 REKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 478



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 190/375 (50%), Gaps = 12/375 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNIL 102
           + A  +FD M+R    P  +  + ++L      K  D      ++   G  PN+  YN+L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  C  G++      F  +     +P+  T+N+L+  +    R+ E   LF  ++A G 
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PNVIT++TLI+GLCRTG    AL +F  M          CKPN  TY+T+I GLC+   
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPNKYTYTTLISGLCRAEK 305

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFN 281
           V +A+ LF +M    I PD V YNSLI G C     +EA++L+ EM    G+QP++VTFN
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  CK  K+  A+ L+  M  +G+  ++CTY  L+ G     K++ A E++  M   
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               D VS    + G CK   +++A +++      G  P   T+  L   L ++ +VE A
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485

Query: 402 LKLFDEMQRDGVAAD 416
            KL +  +   + A 
Sbjct: 486 QKLMEPAKARDITAQ 500



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 172/325 (52%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+D+NI  +V TY+S+I  L       E+ ++  EMM  G  P V  FN +M    ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M++A  +   MV+ G +P+  +Y+ L+ G   +GK++ + ++   M   G      +Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L+    K + V+ A SL+ EM+  G  P  + +  L LGL +  +V+ A + F +M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +   Y   + GLC +G + +A  LF  ++   C  D+  YN L+D +CK+ R++   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF ++     VPNV+T++ +I GLC  G+++KA ++F  M E    P+  T+  LI G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 533 IRINEPSKVNELLHKMKEKKVMPDA 557
            R  +  +  EL  KM +  + PDA
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDA 325



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 168/313 (53%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M D+ +  +V T++ I+  L K  K +E+ ++L+ M+  G  P+   +N +M GF     
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + +A E++  M   G K D+VSY+ILI+G  K  +++E+L +  EMV +G  P++  Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L   L +  +V+HA  LFDEM R G   D   +   I GLC+ G + +A E F+ +    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ ++  YN L+ GLC SG+L+ A  LF  +      P+VVTYN ++  +C   ++++  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF  M      P+VITF  LIHG  R  E  K  E+   M E    P+    + ++  L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 568 VKNEISLKSLPSF 580
            + E  +++   F
Sbjct: 301 CRAEKVIQARELF 313


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 252/494 (51%), Gaps = 12/494 (2%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           + NI++ S  K   +       + +    +FP++ T+N++++   + G V         +
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +     P   T+NS++KGL    R  +A  +F  + A G  P+V ++N LI G CR G  
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL  ++EM       G    P+ V++S +I    + G +D A     +M++  + PD 
Sbjct: 281 EEALRFYKEMR------GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG 334

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V Y  +I G C A    EA R+  EM+  G  P VVT+N +++ LCK R++ +A  LL+ 
Sbjct: 335 VIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNE 394

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +RGV P+ CT+ TL+ G+C  G I +A + F ++     + D V+YN LI+G C+  +
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + +A  L+ +M S+ I P  VTY+ L     E  QV++A    DEM   G+  +  TY +
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G C++G + +  +    +R  K   D+  YN LI G  K G++  A+ L   + +  
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENEN 574

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+ VTYN++I G    G M +A  ++  M      PD  T+  +I+G +      K  
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSF 634

Query: 543 ELLHKMKEKKVMPD 556
           +L  +M +K + PD
Sbjct: 635 QLHDEMLQKGLAPD 648



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 234/457 (51%), Gaps = 6/457 (1%)

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G   L   A+  +L S    N  T N ++       +  E   + ++++     P+V+
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T+N +++   R G    A+ L + M +         KP  VTY++++ GL + G  DKA+
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKG------IKPGLVTYNSVLKGLLRNGRWDKAR 249

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F  M    + PDV ++N LI G C A +  EA R + EM  + V P VV+F+ ++   
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            +  +MD A+  L  M + G+ P+   Y  ++ GFC  G +  A  +   M + GC  D 
Sbjct: 310 TRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDV 369

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+YN L+NG CK + + +A  L  EM  +G+ P + T+ TL  G      +E AL+ FD 
Sbjct: 370 VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           +    +  D  TY T IDG+C+ G + +A EL+  +   +   +   Y+ LID  C+ G+
Sbjct: 430 ISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQ 489

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A+     + +  +VPN++TYN +I+G C  G + K +     M  +   PD+IT++ 
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           LIHG+++  +  +   LL  M+ + V PDA   ++++
Sbjct: 550 LIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/408 (34%), Positives = 218/408 (53%), Gaps = 8/408 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-PNTVTYSTIIDGLCKEG 221
           E N  T N +++  C+T         F E+     E+   C  P+ VT++ ++D   + G
Sbjct: 156 EVNTYTLNIMVHSYCKTLQ-------FGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAG 208

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V+ A AL   M  + I P +VTYNS++ GL     W++A+ +F  M   GV P V +FN
Sbjct: 209 DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFN 268

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++   C+  +++EA R    M  R V P+  +++ L+  F   G+++ A E    M   
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D V Y ++I G+C+   + EAL +  EMV+ G  P VVTYNTL  GL +  ++  A
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L +EM+  GV  D  T+TT I G C++G I +A++ F T+   +   DI  YN LIDG
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +C+ G L  A EL+  +    + PN VTY+I+I   C  GQ+D A     +M      P+
Sbjct: 449 MCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPN 508

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++T++ +I G+ R    SK  + L KM+  KVMPD    + ++   VK
Sbjct: 509 IMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVK 556



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 195/366 (53%), Gaps = 24/366 (6%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIG------RV 112
           P V SF+ L+    +    D        +   GL P+   Y ++I  FC+ G      RV
Sbjct: 297 PDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRV 356

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
               +AFG     C  P+  T+N+L+ GL  E R+ +A  L  ++K  G  P++ T+ TL
Sbjct: 357 RDEMVAFG-----CL-PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTL 410

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+G CR G+   AL  F+ +++         +P+ VTY+T+IDG+C++G + KA  L+  
Sbjct: 411 IHGYCRDGNIEKALQFFDTISDQR------LRPDIVTYNTLIDGMCRQGDLGKANELWDD 464

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    I P+ VTY+ LI   C     + A     EM+++G+ P+++T+N I+   C++  
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + +  + L  M    V P+  TYNTL+ G+   GK++ A  L   ME+   + D V+YN+
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNM 584

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I+G+  +  ++EA  +Y++M ++GI+P   TY ++  G       + + +L DEM + G
Sbjct: 585 IISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644

Query: 413 VAADTR 418
           +A D +
Sbjct: 645 LAPDDK 650



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 37/304 (12%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           QP V  F++++    ++RK  EA     L++   V   A   N L+      G  +   +
Sbjct: 88  QPQV--FDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTAD 145

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            +  + S   + +  + NI+++ YCK  +  E  ++  EM  + + P VVT+N +    F
Sbjct: 146 AYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARF 205

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
               VE A+ L D M   G+               K G +                    
Sbjct: 206 RAGDVEAAMALIDSMVSKGI---------------KPGLV-------------------- 230

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++ GL ++GR   A E+F ++    + P+V ++N++I G C  G++++A   + +M
Sbjct: 231 TYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM 290

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
                 PDV++F  LI  F R  E     E L +M+E  +MPD  I ++V+    +  + 
Sbjct: 291 RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLM 350

Query: 574 LKSL 577
           L++L
Sbjct: 351 LEAL 354


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 273/555 (49%), Gaps = 23/555 (4%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSF--NILLASLAK 79
           R N   +L     L      +++ T + A C+  Y L   PSP P  +    ++L+    
Sbjct: 71  RHNPQLVLHLLSHLQNHPHSLDLATSSLAICVL-YRL---PSPKPSINLIQRLILSPTCT 126

Query: 80  NKH-YDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           N+  +D       R++A         +++L+  +C++ + +     F  I    F PN  
Sbjct: 127 NRTIFDELALARDRVDAKTTL----IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIE 182

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T N ++      +R   A  L+ ++       ++ T+N +IN LC+ G    A      M
Sbjct: 183 TCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM 242

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                 +GV  KPN VTY+TII G C  G   +A+ +F  MKD+ + PD  TYNS I GL
Sbjct: 243 ET----LGV--KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGL 296

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  L  +M++ G+ P+ VT+N ++D  C    +D+A    D M+ +G+  + 
Sbjct: 297 CKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASL 356

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN  +    + G++  A+ +   M   G   D V++NILINGYC+  + + A  L  E
Sbjct: 357 VTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE 416

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           MV KGI+PT+VTY +L   L + ++++ A  LF ++Q++G+  D   +   IDG C NG 
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           I  A +L + +  +K   D   YN L+ G C+ G+++ A +L   +    + P+ ++YN 
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G    G M  A  +  +M      P ++T++ LI G  +  E     ELL +M  K 
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596

Query: 553 VMPDASIVSIVVDLL 567
           + PD S    +++ +
Sbjct: 597 ITPDDSTYLSIIEAM 611



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 227/438 (51%), Gaps = 6/438 (1%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F+ L++      +  EA   F  +K  G  PN+ T N +++   +   T +A  L+ EM 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
             N       + +  T++ +I+ LCKEG + KAK     M+   + P+VVTYN++IHG C
Sbjct: 209 RMN------IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
               +  A+ +F  M D+G++P   T+N  +  LCK  +++EAS L+  M++ G+ PNA 
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYN L+DG+C  G +++A      M S G     V+YN+ I+       + +A ++ +EM
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KG+ P  VT+N L  G       + A  L DEM   G+     TYT+ I  L K   +
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  LF  ++      DI  +N LIDG C +G +  A++L   + +  ++P+ +TYN +
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +QG C +G++++AR L  +M+     PD I+++ LI G+ +  +      +  +M     
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562

Query: 554 MPDASIVSIVVDLLVKNE 571
            P     + ++  L KN+
Sbjct: 563 DPTILTYNALIQGLCKNQ 580



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 179/341 (52%), Gaps = 12/341 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N  ++ L K    +       ++   GL PN  TYN LI+ +C  G +   +  
Sbjct: 284 PDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAY 343

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++      +  T+N  I  L  E R+ +A  +  +++  G  P+ +T+N LING CR
Sbjct: 344 RDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCR 403

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L +EM      +G   +P  VTY+++I  L K   + +A ALF +++ E +
Sbjct: 404 CGDAKRAFGLLDEM------VGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD++ +N+LI G C   + + A +L  EM +  V P  +T+N +M   C+  K++EA +
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LLD M +RG++P+  +YNTL+ G+   G +  A  +   M + G     ++YN LI G C
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC 577

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           KN+E E A  L +EMVSKGI P   TY ++   +  +  +E
Sbjct: 578 KNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 258/500 (51%), Gaps = 23/500 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSP--PPVSSFNILLASLAKNKHYDTRLNATGLFPN 95
           R GD+      EA  + + M  + PS   P  +    L AS    +  + R       P+
Sbjct: 68  RRGDLE-----EAIRLVESMAGLEPSAAGPCAALIKKLCAS---GRTAEARRVLASCEPD 119

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           + +YN ++  +C  G++     A   +      P+  T+N+LI+GL    R   A A+  
Sbjct: 120 VMSYNAMVAGYCVTGQLD---NARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLD 176

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
            +   GC P+V+TY  L+   C+      A+ L +EM +        C P+ VTY+ +++
Sbjct: 177 DMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG------CAPDIVTYNVVVN 230

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           G+C+EG VD A      +      P+ V+YN ++ GLC A  W +A++L  EM  +G  P
Sbjct: 231 GICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP 290

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VVTFN+++  LC+   ++ A  +LD + + G  PN+ +YN ++  FC   K++RA    
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 350

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M S GC  D VSYN L+   C+  EV+ A+ L  ++  KG  P +++YNT+  GL + 
Sbjct: 351 ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 410

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            + E AL+L +EM   G+  D  TY+T   GLC+ G I EA++ F  ++ +    +   Y
Sbjct: 411 GKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLY 470

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N ++ GLCK      A +LF  +     +PN  TY I+I+GL  +G + +AR++  ++  
Sbjct: 471 NAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL-- 528

Query: 516 NAAAPDVITFDMLIHGFIRI 535
              +  V++  ++  G IR+
Sbjct: 529 --CSRGVVSKTLVNKGAIRL 546



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 233/453 (51%), Gaps = 14/453 (3%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI   C  GR +       R+L SC  P+  ++N+++ G     ++  A  L   + A  
Sbjct: 96  LIKKLCASGRTAEAR----RVLASC-EPDVMSYNAMVAGYCVTGQLDNARRL---VAAMP 147

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+  TYNTLI GLC  G T  AL + ++M          C P+ VTY+ +++  CK  
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG------CVPDVVTYTILLEATCKRS 201

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              +A  L  +M+D+   PD+VTYN +++G+C     ++A      +   G +P+ V++N
Sbjct: 202 GYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYN 261

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++  LC   + ++A +L+  M ++G  PN  T+N L+   C  G +  A E+   +   
Sbjct: 262 IVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKY 321

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  + +SYN +++ +CK K+++ A++    MVS G  P +V+YNTL   L    +V+ A
Sbjct: 322 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAA 381

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++L  +++  G      +Y T IDGL K G   EA+EL   +     + DI  Y+ +  G
Sbjct: 382 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSG 441

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC+ GR++ A + FC +    + PN V YN ++ GLC       A DLF  M  N   P+
Sbjct: 442 LCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPN 501

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             T+ +LI G        +  E++ ++  + V+
Sbjct: 502 ESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 231/495 (46%), Gaps = 17/495 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++A   F + + Y  L        +  L     G +  +     +A  N  ++ L     
Sbjct: 12  MSALPTFASSHPYPSLPTPKTAAPKPRLNLAYAGAVAPNAVPHRSAASNDRLRVLVRRGD 71

Query: 147 IMEAAALFTKLKAFGCEPNVI-TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           + EA  L   +   G EP+       LI  LC +G T  A  +              C+P
Sbjct: 72  LEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLAS-----------CEP 118

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + ++Y+ ++ G C  G +D A+ L   M  E   PD  TYN+LI GLC     + A  + 
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVL 175

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M+ +G  P VVT+ ++++  CK     +A +LLD M  +G  P+  TYN +++G C  
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+++ A E   S+ S GC+ + VSYNI++ G C  +  E+A  L  EM  KG  P VVT+
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L   L     VE A+++ D++ + G   ++ +Y   +   CK   +  A+     +  
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  DI +YN L+  LC+ G +  A EL   L      P +++YN +I GL   G+ ++
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A +L  +M      PD+IT+  +  G  R     +  +   K+++  + P+  + + ++ 
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILL 475

Query: 566 LLVKNEISLKSLPSF 580
            L K   +  ++  F
Sbjct: 476 GLCKRRATHSAIDLF 490


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 275/526 (52%), Gaps = 16/526 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            EA  +F+ M   +   P V S+N ++  L +  ++        R+   G++P++YT+ I
Sbjct: 93  QEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +  FC  GR +        +       NA ++ ++I G + E+  +EA  LF ++   G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
             P+++T+N LI+ LC+ G+   +  LF + M  G      VC PN  T++  I GLC++
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG------VC-PNLFTFNIFIQGLCRK 264

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +D+A  L   +  E + PDV++YN+LI G C  +   EA+    +M++ GV+P+  T+
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N I++  CK   M  A ++L   + +G  P+  TY++L++G C  G +NRA  +F     
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G KH  + YN L+ G  K   V +AL L ++M+  G  P + TYN +  GL ++  +  
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  + ++    G   D  T+ T IDG CK   + +A+E+  T+       D+  YN L++
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLCK+ +L    + F ++      PN++TYNI+I+  C D ++ +A +LF +M+     P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKM-KEKKVMPDASIVSIVVD 565
           D++T   LI G     E  K  EL   + KE K     +I +I+++
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 154/478 (32%), Positives = 248/478 (51%), Gaps = 7/478 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++ T+N LI+  CK G V      F ++++    PN  TFN  I+GL  +  I EA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           A L   + + G  P+VI+YNTLI G C+    + A     +M N   E      PN  TY
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE------PNEFTY 324

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TII+G CK G +  A  +      +   PD  TY+SLI+GLC+  D N A  +F E M+
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G + S++ +N ++  L K   + +A +L+  M++ G  P+  TYN +++G C MG ++ 
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +     + GC  D  ++N LI+GYCK + +++A+ +   M+S GI P V+TYNTL  
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  ++++ +  F  M   G   +  TY   I+  CK+  + EA+ELF+ ++      
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDL 509
           DI     LI GLC +G L  A+ELF ++        +   +NIMI   C    +  A  L
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKL 624

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           F  M  +  APD  T+ ++I  + +       +  L +   K ++P  +    V++ L
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 269/515 (52%), Gaps = 14/515 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EA+ +FD ML+    P  + +FN L+  L K  +        +++   G+ PNL+T+NI 
Sbjct: 199 EAYHLFDEMLKQGICPD-ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C+ G +         I+    TP+  ++N+LI G    S+++EA     K+   G 
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           EPN  TYNT+ING C+ G    A  +  + A   G I     P+  TYS++I+GLC +G 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRD-AMFKGFI-----PDEFTYSSLINGLCNDGD 371

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A A+F +  ++     ++ YN+L+ GL       +A +L  +MM+ G  P + T+N+
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LCK   + +A+ +L+  + +G  P+  T+NTL+DG+C    +++A E+  +M S G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++YN L+NG CK ++++  +  ++ M+ KG  P ++TYN L     +  +V  A+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDG 461
           +LF EM+  G+  D  T  T I GLC NG + +A ELF T+ +  K       +N +I+ 
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C+   +  A +LF  +      P+  TY +MI   C  G +D A    L+       P 
Sbjct: 612 FCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             T   +++     +  S+   +++ M +  ++P+
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 248/482 (51%), Gaps = 6/482 (1%)

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           + + G+V      F R+      P+  ++N+++  L       +A  ++ ++K  G  P+
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V T+   +   C TG    AL L   M  G G     C+ N V+Y  +I G  KE    +
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMP-GQG-----CEFNAVSYCAVISGFYKENCQIE 199

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  LF +M  + I PD++T+N LIH LC   +  E+++LF ++M +GV P++ TFN+ + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LC+   +DEA+RLL+ +V  G+ P+  +YNTL+ GFC   K+  AE     M + G + 
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           ++ +YN +ING+CK   ++ A  + R+ + KG  P   TY++L  GL     +  A+ +F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            E    G       Y T + GL K G +++A++L + +    C  DI  YN +++GLCK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G L  A  +         +P++ T+N +I G C    MDKA ++   M  +   PDVIT+
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           + L++G  +  +   V +    M EK   P+    +I+++   K+    +++  F   + 
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 586 QG 587
           +G
Sbjct: 560 RG 561



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 17/366 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVS-LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G  P+++TYN+++N  CK+G +S    I    I + C  P+  TFN+LI G   +  + +
Sbjct: 421 GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI-PDIFTFNTLIDGYCKQRNMDK 479

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +   + + G  P+VITYNTL+NGLC+       ++ F+ M          C PN +T
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG------CTPNIIT 533

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +I+  CK+  V +A  LF +MK   + PD+VT  +LI GLC   + ++A  LF+ + 
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593

Query: 270 DQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +     S   FN++++  C+   +  A +L   M      P+  TY  ++D +C  G I
Sbjct: 594 KEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A        S G      +   ++N  C    + EA+ +   MV  GI P  V     
Sbjct: 654 DLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN---- 709

Query: 389 FLGLFEIHQVE-HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
              +FE  + E  A K+  E           +Y    DG+ +N  ++EA  L   +   K
Sbjct: 710 --SIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGI-RNRKVVEARPLLYKVAYQK 766

Query: 448 CELDIQ 453
            +L ++
Sbjct: 767 AKLQLE 772



 Score = 42.0 bits (97), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 4/191 (2%)

Query: 400 HALKLFDEMQ-RDGVAADTRTYTTFIDGLCKNGYIIEAVE--LFRTLRILKCELDIQAYN 456
           +ALK+F++++  DG      TY   I+ L  +G   EA+E  L    + +  ++    Y 
Sbjct: 22  NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKF-EAMEDVLAEMRKNVDSKMLEGVYI 80

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            ++    + G+++ A  +F  +      P+V +YN ++  L   G   +A  +++ M++ 
Sbjct: 81  GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              PDV T  + +  F     P+    LL+ M  +    +A     V+    K    +++
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 577 LPSFLVQERQG 587
              F    +QG
Sbjct: 201 YHLFDEMLKQG 211


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 250/452 (55%), Gaps = 30/452 (6%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  ++   +ILIN F  + +++  F    +IL+  + P+  T  +L+KGL   + + +A
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                 + A G   + ++Y TLINGLC++G T                      P+   Y
Sbjct: 65  LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETK--------------------APDQFMY 104

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S II+ LCK+  V  A  L+ +M  + I PDVVTYN+LI+G C      +A RLF EM  
Sbjct: 105 SMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRL 164

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P+V +FN+++D LCK   +     +L +M+++ V+P+  T ++L+DG+ L+ K N+
Sbjct: 165 KNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANK 224

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +F +M   G   D  SYNI+ING  K K V+EA+ L++EM  K + P  +TY+TL  
Sbjct: 225 ARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLID 284

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL ++ ++ +   L DEM+  G +A+  TY++ ++ LCK+G+   A+ +F  ++    E 
Sbjct: 285 GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEP 344

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++  YN L+DGLCK+GRLK A E+F  L       +V  Y +MI GLC +   D+A    
Sbjct: 345 NMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY--- 401

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
                    P+ +T++++I    + N+ +K+ 
Sbjct: 402 ------GCTPNAVTYEIIIRALFK-NDKNKLQ 426



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 209/412 (50%), Gaps = 20/412 (4%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G + ++I  + LIN          A ++  ++     +IG   +P+TVT +T++ GLC  
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKIL----KIGY--QPDTVTLTTLLKGLCIN 58

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             V KA      +  +    D V+Y +LI+GLC + +                 P    +
Sbjct: 59  NEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA--------------PDQFMY 104

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           ++I++ LCK++ + +A  L   MV + + P+  TYNTL+ GFC++G++  A  LF  M  
Sbjct: 105 SMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRL 164

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
                +  S+NILI+G CK  +V+   S+   M+ + +KP VVT ++L  G F + +   
Sbjct: 165 KNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANK 224

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  +F+ M ++GV  D R+Y   I+GL K   + EAV LF+ ++      D   Y+ LID
Sbjct: 225 ARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLID 284

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GL K GR+ + W+L   +       NV+TY+ ++  LC  G  D A  +F  +++    P
Sbjct: 285 GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEP 344

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           +++T+++L+ G  +        E+ H +  K    D  + +++++ L +  +
Sbjct: 345 NMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREAL 396



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 198/394 (50%), Gaps = 25/394 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLA-----SLAKNKHYDTRLNATGLFPNLYTYNIL 102
           N AF +   +L++   P  V+   +L        + K  H+   + A G   +  +Y  L
Sbjct: 27  NYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTL 86

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  CK G                  P+   ++ +I  L  +  +++A  L+ ++     
Sbjct: 87  INGLCKSGETK--------------APDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRI 132

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V+TYNTLI G C  G    A+ LF EM   N        PN  +++ +IDGLCKEG 
Sbjct: 133 FPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN------IVPNVCSFNILIDGLCKEGD 186

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V   K++   M  +++ PDVVT +SLI G       N+A+ +F  M   GV   + ++N+
Sbjct: 187 VKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNI 246

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ L K + +DEA  L   M  + + P+  TY+TL+DG   +G+I+   +L   M + G
Sbjct: 247 MINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATG 306

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + ++Y+ L+N  CK+   + A+ ++ ++  KG +P +VTYN L  GL +  +++ A 
Sbjct: 307 RSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQ 366

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           ++F ++   G   D R YT  I+GLC+     EA
Sbjct: 367 EIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA 400



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 178/373 (47%), Gaps = 49/373 (13%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+   I  D++  + LI+   H    N A  +  +++  G QP  VT   ++  LC N +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + +A    D ++ +G R +  +Y TL++G C  G+    ++                Y++
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFM--------------YSM 106

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +IN  CK+K V +A  LY EMV K I P VVTYNTL  G   + Q+E A++LF+EM+   
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 413 VAADTRTYTTFIDGLCKNGYI-----IEAVELFRTLR--ILKCE---------------- 449
           +  +  ++   IDGLCK G +     + AV + ++++  ++ C                 
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 450 ------------LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
                       +D+++YN +I+GL K+  +  A  LF  +    + P+ +TY+ +I GL
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G++    DL  +M     + +VIT+  L++   +         +  K+K+K   P+ 
Sbjct: 287 GKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNM 346

Query: 558 SIVSIVVDLLVKN 570
              +I+VD L KN
Sbjct: 347 VTYNILVDGLCKN 359



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 25/260 (9%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNI-----LLASLAKNKHYDTRLNATGL 92
           +EGD+          +   M++    P  V+  ++     L+    K ++    +   G+
Sbjct: 183 KEGDVK-----GGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGV 237

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
             +L +YNI+IN   K   V    I F  +     TP+  T+++LI GL    RI     
Sbjct: 238 TIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWD 297

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  +++A G   NVITY++L+N LC++GH   A+ +F ++ +   E      PN VTY+ 
Sbjct: 298 LIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFE------PNMVTYNI 351

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++DGLCK G +  A+ +F  +  +    DV  Y  +I+GLC    ++EA          G
Sbjct: 352 LVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA---------YG 402

Query: 273 VQPSVVTFNVIMDELCKNRK 292
             P+ VT+ +I+  L KN K
Sbjct: 403 CTPNAVTYEIIIRALFKNDK 422


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 275/526 (52%), Gaps = 16/526 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            EA  +F+ M   +   P V S+N ++  L +  ++        R+   G++P++YT+ I
Sbjct: 93  QEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +  FC  GR +        +       NA ++ ++I G + E+  +EA  LF ++   G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
             P+++T+N LI+ LC+ G+   +  LF + M  G      VC PN  T++  I GLC++
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG------VC-PNLFTFNIFIQGLCRK 264

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +D+A  L   +  E + PDV++YN+LI G C  +   EA+    +M++ GV+P+  T+
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N I++  CK   M  A ++L   + +G  P+  TY++L++G C  G +NRA  +F     
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G KH  + YN L+ G  K   V +AL L ++M+  G  P + TYN +  GL ++  +  
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  + ++    G   D  T+ T IDG CK   + +A+E+  T+       D+  YN L++
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLCK+ +L    + F ++      PN++TYNI+I+  C D ++ +A +LF +M+     P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKM-KEKKVMPDASIVSIVVD 565
           D++T   LI G     E  K  EL   + KE K     +I +I+++
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMIN 610



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/478 (32%), Positives = 248/478 (51%), Gaps = 7/478 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++ T+N LI+  CK G V      F ++++    PN  TFN  I+GL  +  I EA
Sbjct: 211 GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEA 270

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           A L   + + G  P+VI+YNTLI G C+    + A     +M N   E      PN  TY
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE------PNEFTY 324

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TII+G CK G +  A  +      +   PD  TY+SLI+GLC+  D N A  +F E M+
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G + S++ +N ++  L K   + +A +L+  M++ G  P+  TYN +++G C MG ++ 
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +     + GC  D  ++N LI+GYCK + +++A+ +   M+S GI P V+TYNTL  
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  ++++ +  F  M   G   +  TY   I+  CK+  + EA+ELF+ ++      
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDL 509
           DI     LI GLC +G L  A+ELF ++        +   +NIMI   C    +  A  L
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKL 624

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           F  M  +  APD  T+ ++I  + +       +  L +   K ++P  +    V++ L
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 268/515 (52%), Gaps = 14/515 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EA+ +FD ML+     P + +FN L+  L K  +        +++   G+ PNL+T+NI 
Sbjct: 199 EAYHLFDEMLK-QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C+ G +         I+    TP+  ++N+LI G    S+++EA     K+   G 
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           EPN  TYNT+ING C+ G    A  +  + A   G I     P+  TYS++I+GLC +G 
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRD-AMFKGFI-----PDEFTYSSLINGLCNDGD 371

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A A+F +  ++     ++ YN+L+ GL       +A +L  +MM+ G  P + T+N+
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LCK   + +A+ +L+  + +G  P+  T+NTL+DG+C    +++A E+  +M S G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++YN L+NG CK ++++  +  ++ M+ KG  P ++TYN L     +  +V  A+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDG 461
           +LF EM+  G+  D  T  T I GLC NG + +A ELF T+ +  K       +N +I+ 
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C    +  A +LF  +      P+  TY +MI   C  G +D A    L+       P 
Sbjct: 612 FCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             T   +++     +  S+   +++ M +  ++P+
Sbjct: 672 FTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 248/482 (51%), Gaps = 6/482 (1%)

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           + + G+V      F R+      P+  ++N+++  L       +A  ++ ++K  G  P+
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPD 145

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V T+   +   C TG    AL L   M  G G     C+ N V+Y  +I G  KE    +
Sbjct: 146 VYTHTIRMKSFCITGRPTAALRLLNNMP-GQG-----CEFNAVSYCAVISGFYKENCQIE 199

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  LF +M  + I PD++T+N LIH LC   +  E+++LF ++M +GV P++ TFN+ + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LC+   +DEA+RLL+ +V  G+ P+  +YNTL+ GFC   K+  AE     M + G + 
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           ++ +YN +ING+CK   ++ A  + R+ + KG  P   TY++L  GL     +  A+ +F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            E    G       Y T + GL K G +++A++L + +    C  DI  YN +++GLCK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G L  A  +         +P++ T+N +I G C    MDKA ++   M  +   PDVIT+
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           + L++G  +  +   V +    M EK   P+    +I+++   K+    +++  F   + 
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 586 QG 587
           +G
Sbjct: 560 RG 561



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 212/441 (48%), Gaps = 9/441 (2%)

Query: 127 FTPNAATFNSLIK--GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           F     T+  +I+  GLH +   ME   L    K    +     Y  ++    R G    
Sbjct: 36  FKHTLETYKCMIEKLGLHGKFEAMEDV-LAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+N+FE M   +      C+P+  +Y+ I++ L + G+  +A  ++++MKD  I PDV T
Sbjct: 95  AVNVFERMDFYD------CEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYT 148

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +   +   C       A RL   M  QG + + V++  ++    K     EA  L D M+
Sbjct: 149 HTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEML 208

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           ++G+ P+  T+N L+   C  G +  +E+LF  +   G   +  ++NI I G C+   ++
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA  L   +VS+G+ P V++YNTL  G  +  ++  A     +M   GV  +  TY T I
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +G CK G +  A ++ R         D   Y+ LI+GLC  G +  A  +F         
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            +++ YN +++GL   G + +A  L  DM E+  +PD+ T++++++G  ++   S  N +
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448

Query: 545 LHKMKEKKVMPDASIVSIVVD 565
           L+    K  +PD    + ++D
Sbjct: 449 LNDAIAKGCIPDIFTFNTLID 469



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/302 (20%), Positives = 123/302 (40%), Gaps = 40/302 (13%)

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           M++ +QP  V   +      +N  ++       +  + G +    TY  +++   L GK 
Sbjct: 1   MNRALQPKHVAAVIRY----QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKF 56

Query: 329 NRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              E++   M +++  K  +  Y  ++  Y +  +V+EA++++  M     +P+V +YN 
Sbjct: 57  EAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNA 116

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +   L E      A K++  M+  G+  D  T+                     T+R+  
Sbjct: 117 IMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH---------------------TIRM-- 153

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
                          C +GR   A  L  ++P      N V+Y  +I G   +    +A 
Sbjct: 154 ------------KSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF +M +    PD++TF+ LIH   +     +  +L  K+ ++ V P+    +I +  L
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261

Query: 568 VK 569
            +
Sbjct: 262 CR 263



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 4/191 (2%)

Query: 400 HALKLFDEMQ-RDGVAADTRTYTTFIDGLCKNGYIIEAVE--LFRTLRILKCELDIQAYN 456
           +ALK+F++++  DG      TY   I+ L  +G   EA+E  L    + +  ++    Y 
Sbjct: 22  NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKF-EAMEDVLAEMRKNVDSKMLEGVYI 80

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            ++    + G+++ A  +F  +      P+V +YN ++  L   G   +A  +++ M++ 
Sbjct: 81  GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              PDV T  + +  F     P+    LL+ M  +    +A     V+    K    +++
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 577 LPSFLVQERQG 587
              F    +QG
Sbjct: 201 YHLFDEMLKQG 211


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 167/497 (33%), Positives = 249/497 (50%), Gaps = 8/497 (1%)

Query: 64  PPPVSSFNILLASLAKNKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           PP   + N +L  LA+N+      RL      PN++T+NI+I+  CK G +      F R
Sbjct: 165 PPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVR 224

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     +P+  T+NSLI G      + E   L ++++  GC  +V+TYN LIN   + G 
Sbjct: 225 MKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGW 284

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A + F EM      +GV+   N VT ST +D  CKEG V +A  LF QM+   + P+
Sbjct: 285 IEKAYSYFGEMK----RLGVMA--NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPN 338

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             TY SL+ G C A   ++A  L  EM+ QG+ P+VVT+ V++D LCK  K+  A  +L 
Sbjct: 339 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLS 398

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LM + GV+ N   Y TL+ G  +     RA +L   M++ G + D   Y  LI G CK +
Sbjct: 399 LMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQ 458

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +++EA SL  +M   G++P  V Y T+    F+  +   A+ L  ++   G+  +  TY 
Sbjct: 459 KLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYC 518

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDGLCK G I EA+  F  +R L  + ++Q Y  LIDG CK G L  A  L   +   
Sbjct: 519 ALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +  + V Y  +I G    G +  A  L   M E     D+  +   I GF  +N   + 
Sbjct: 579 GMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEA 638

Query: 542 NELLHKMKEKKVMPDAS 558
             +L +M    + PD +
Sbjct: 639 RGVLSEMIGTGITPDKT 655



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 223/467 (47%), Gaps = 10/467 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           ++ L++     G +     A  R+ +    PN  T N ++  L    +      LF  L 
Sbjct: 136 FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP 195

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A    PNV T+N +I+ LC+ G  + A  LF  M        + C P+ VTY+++IDG  
Sbjct: 196 A----PNVFTFNIVIDFLCKQGELVEARALFVRMK------AMGCSPDVVTYNSLIDGYG 245

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G +++ + L  +M+      DVVTYN+LI+         +A   F EM   GV  +VV
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T +  +D  CK   + EA +L   M  RG+ PN  TY +L+DG C  G+++ A  L   M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   + V+Y ++++G CK  +V  A  +   M   G+K   + Y TL  G F     
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E AL L +EM+  G+  D   Y T I GLCK   + EA  L   +       +   Y  +
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTI 485

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +D   K+G+   A  L   +P   L PNVVTY  +I GLC  G + +A   F  M E   
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            P+V  +  LI GF +I   SK   L+++M +K +  D  + + ++D
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLID 592



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 153/330 (46%), Gaps = 41/330 (12%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           PSV  F+ ++  L  +  +D+A R L  + Q  V PN  T N ++       +      L
Sbjct: 133 PSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 190

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  + +        ++NI+I+  CK  E+ EA +L+  M + G  P VVTYN+L  G  +
Sbjct: 191 FEHLPAPNV----FTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 246

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTY---------------------------------- 420
             ++E    L  EM++ G AAD  TY                                  
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306

Query: 421 -TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
            +TF+D  CK G + EA++LF  +R+     +   Y  L+DG CK+GRL  A  L   + 
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           H  LVPNVVTY +M+ GLC +G++  A D+   ME      + + +  LIHG        
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +  +LL++MK K +  D S+   ++  L K
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCK 456



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 29/314 (9%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL PN+ TY ++++  CK G+V++       + R+    N   + +LI G         A
Sbjct: 369 GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERA 428

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTG-------------------HTMIALNLFEE 191
             L  ++K  G E +V  Y TLI GLC+                     +T+I   + + 
Sbjct: 429 LDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA 488

Query: 192 MANGNGEIGVVC----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                 E   V           +PN VTY  +IDGLCK G + +A + F +M++  ++P+
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPN 548

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V  Y +LI G C     ++A  L  EM+D+G+    V +  ++D   K   +  A  L  
Sbjct: 549 VQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKA 608

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M++ G++ +   Y   + GFC M  +  A  +   M   G   D  +YN LI  Y K  
Sbjct: 609 KMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLG 668

Query: 362 EVEEALSLYREMVS 375
            +EEA SL  EM S
Sbjct: 669 NMEEASSLQNEMES 682



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 8/261 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  ++  Y  LI   CK+ ++        ++      PN   + +++       +  EA
Sbjct: 439 GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEA 498

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            AL  K+   G +PNV+TY  LI+GLC+ G    A++ F++M     E+G+   PN   Y
Sbjct: 499 VALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR----ELGL--DPNVQVY 552

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+IDG CK G + KA  L  +M D+ ++ D V Y SLI G     D   A  L  +M++
Sbjct: 553 TTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE 612

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+Q  +  +   +   C    M EA  +L  M+  G+ P+   YN L+  +  +G +  
Sbjct: 613 TGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEE 672

Query: 331 AEELFGSMESM--GCKHDDVS 349
           A  L   MES+   C  +D +
Sbjct: 673 ASSLQNEMESVLSSCTEEDTA 693



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 6/208 (2%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P+V  ++TL   L +   ++ A++    +++  V  +TRT    +  L +N        L
Sbjct: 133 PSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 190

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  L       ++  +N +ID LCK G L  A  LF  +      P+VVTYN +I G   
Sbjct: 191 FEHLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 246

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++++   L  +M ++  A DV+T++ LI+ F +     K      +MK   VM +   
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +S  VD   K  +  +++  F     +G
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRG 334


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 272/593 (45%), Gaps = 85/593 (14%)

Query: 36  TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK--------HYDTRL 87
           T + G      P +A  +FD +L+       +   N  L+ +A+          +   R 
Sbjct: 32  TKQGGRQRATEPGDAHQVFDRLLK-RGDRASIFDLNRALSDVARASPAVAISLFNRMPRA 90

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFT--PNAATFNSLIKGLHAES 145
            AT   PN+ TY I+I C  ++GR+ L F   GR++ +     PN    +S      A  
Sbjct: 91  GATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGG 150

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R M    +  ++   GC+P++ +Y  L+ GLC    +  AL+L   MA+  G     C  
Sbjct: 151 RAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR----CPL 206

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN------------------- 246
           + V Y+T+I+GL +EG +DKA +LF  M D   +PDVVTY+                   
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 266

Query: 247 ----------------SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
                           SL+HG C +    EA  +F +M   GV+P VVT+  +MD LCKN
Sbjct: 267 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 326

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K  EA ++ D +V+RG +P++ TY TL+ G+   G +    +L   M   G +     +
Sbjct: 327 GKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 386

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N+++  Y K+ +V+EAL ++  M  +G+ P +V Y T+   L    +V+ AL  F+ ++ 
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 446

Query: 411 DGVAADTRTYTTFIDG-----------------------------------LCKNGYIIE 435
           +G+A +   +TT I G                                   LCK G +IE
Sbjct: 447 EGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 506

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A  LF  +  +  E +   YN LIDG C  G++  A +L   +    + P+ VTYN +I 
Sbjct: 507 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 566

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           G   +G+++    L  +M+     P ++T++ML+ G  +        EL  +M
Sbjct: 567 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 220/474 (46%), Gaps = 16/474 (3%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA--LFTKLKAFGC---EPNVITYNTLI 173
           F R+L+     + A+   L + L   +R   A A  LF ++   G     PN+ TY  +I
Sbjct: 50  FDRLLKR---GDRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVI 106

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
               R G   +A      +       G+  +PN +  S+        G   +   +  +M
Sbjct: 107 GCCRRLGRLDLAFATVGRVIT----TGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRM 162

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQP-SVVTFNVIMDELCKNR 291
            +    PD+ +Y  L+ GLC      +A  L   M D +G  P  VV +  +++ L +  
Sbjct: 163 PELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREG 222

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++D+A  L D M+ RG  P+  TY++++        +++A ++F  M   G   D + Y 
Sbjct: 223 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYT 282

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            L++GYC + + +EA+ ++++M   G++P VVTY  L   L +  +   A K+FD + + 
Sbjct: 283 SLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 342

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   D+ TY T + G    G ++E  +L   +     +L    +N ++    K  ++  A
Sbjct: 343 GHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEA 402

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +F ++    L P++V Y  ++  LC  G++D A   F  ++    AP+++ F  LIHG
Sbjct: 403 LLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHG 462

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE--ISLKSLPSFLVQ 583
               ++  KV EL  +M ++ +  D    + ++  L K    I  K+L   +V+
Sbjct: 463 LCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVR 516



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 6/318 (1%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR--PNACTYNTLMDGFCLMGKINRAE 332
           P++ T+ +++    +  ++D A   +  ++  G+R  PN    ++        G+  R +
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMD 156

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKP-TVVTYNTLFL 390
            +   M  +GCK D  SY IL+ G C +K  ++AL L   M   KG  P  VV Y T+  
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 216

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL    Q++ A  LFD M   G + D  TY++ I  L K   + +A ++F  +       
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           D   Y  L+ G C SG+ K A  +F  +  HGV  P+VVTY  ++  LC +G+  +AR +
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV-EPDVVTYTALMDYLCKNGKSTEARKI 335

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  + +    PD  T+  L+HG+       ++++LL  M +K +     I ++++    K
Sbjct: 336 FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAK 395

Query: 570 NEISLKSLPSFLVQERQG 587
           +    ++L  F    +QG
Sbjct: 396 HNKVDEALLVFSNMRQQG 413



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 12/242 (4%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           FN+++ + AK+   D      + +   GL P++  Y  +++  C  GRV      F  + 
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                PN   F +LI GL    +  +   L  ++   G   + I +N ++  LC+ G  +
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A NLF+ M      IG+  +PNT TY+T+IDG C +G +D+A  L   M    + P  V
Sbjct: 506 EAKNLFDLMV----RIGI--EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDV 559

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYN++I+G        +   L  EM  +GV P +VT+ +++  L +  +   A  L   M
Sbjct: 560 TYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619

Query: 304 VQ 305
           ++
Sbjct: 620 IK 621



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 2/185 (1%)

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK--CELDIQAYNCLIDGLCKSGRLK 469
           G   D  +YT  + GLC +    +A++L   +   K  C LD+ AY  +I+GL + G+L 
Sbjct: 166 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 225

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+ LF ++      P+VVTY+ +I  L     MDKA  +F  M +N   PD I +  L+
Sbjct: 226 KAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLV 285

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           HG+    +P +   +  KM    V PD    + ++D L KN  S ++   F    ++G  
Sbjct: 286 HGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHK 345

Query: 590 GESNV 594
            +S  
Sbjct: 346 PDSTT 350


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/565 (28%), Positives = 267/565 (47%), Gaps = 43/565 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK-HYDT-----RLNATGLFPNLYTYNIL 102
            A  + D M R     P   S+N++L++LA+   H D      R+    + P  +T+ + 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
               C++GR          + R    P+A  + ++I  L A+  + EAA L  ++   GC
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK--- 219
             +V T+N L+ GLC  G    A  L + M          C P+ VTY  ++ GLC+   
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQG------CMPSVVTYGFLLQGLCRTRQ 297

Query: 220 ----------------------------EGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
                                       EG + +A  L+  M  +   PDV TY+ L+HG
Sbjct: 298 ADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHG 357

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC    +  A R+  EM ++G  P++VT++ ++   C+N   D+A  +LD M+ +G   N
Sbjct: 358 LCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMN 417

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
           +  YN ++   C  GK+++A  L   M+S GCK D  +YN +I   C N  +EEA  ++R
Sbjct: 418 SQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFR 477

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            ++ +G+    +TYNTL   L    + +  L+L  EM   G   D  +Y   I  LCK G
Sbjct: 478 NLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEG 537

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            +  ++ L   +     + +  +YN LI+ LCK+G+++ A EL   + +  L P++VTYN
Sbjct: 538 NVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYN 597

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I GLC  G    A +L   +      PD++T+++LI    ++        LL K    
Sbjct: 598 TLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISG 657

Query: 552 KVMPDASIVSIVVDLLVKNEISLKS 576
            ++P+     ++V   V+  ++L+ 
Sbjct: 658 GIVPNERTWGMMVQNFVRQTVNLEG 682


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 276/537 (51%), Gaps = 28/537 (5%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------------GLFP 94
           P+ AF IF  M R+   P  ++  N LL SL +   Y +  + +            G+ P
Sbjct: 151 PHHAFQIFKKMKRLRLRPNLLTC-NTLLNSLVR---YPSSHSVSFSREAFNDAIKLGIVP 206

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ T+NI+I  +C   +          + +   +P+  T+N+++  L  + R+ +A  L 
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLL 266

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +K+ G  PN  TYN L+ G C+ G    A N+ E M   N        P+  TY+ +I
Sbjct: 267 MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVWTYNMLI 320

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +GLC EG +++A  L  +M++  + PDVV+YN+LI+G    +  +EA +L  EM ++GV+
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+ VT N+++   CK  KMD+AS  +  M + G  P+  TYNTL++G+C  G +  A   
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA--- 437

Query: 335 FGSMESMGCKH---DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           F +M+ MG K+   D V+ N ++   C+ K++EEA  L      +G     V+Y TL +G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            F+   V+ ALKL+DEM+   +   T TY   I GLC+ G   +A+     L       D
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YN ++ G C+ G ++ A++    +      P+V T NI+++GLC +G ++KA  LF 
Sbjct: 558 ETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFN 617

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
                  A D +T++ LI    +         LL +M+EK++ PD    + ++  L 
Sbjct: 618 TWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 256/526 (48%), Gaps = 16/526 (3%)

Query: 71  NILLASLAKNKHYDTRLNATGLF-PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
           ++LL  +A ++ +D  L+   L  P+    +  I  + + G+    F  F ++ R    P
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRP 168

Query: 130 NAATFNSLIKGL------HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           N  T N+L+  L      H+ S   EA   F      G  PNV T+N +I G C      
Sbjct: 169 NLLTCNTLLNSLVRYPSSHSVSFSREA---FNDAIKLGIVPNVNTFNIVIYGYCLENKFK 225

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A+     M   N      C P+ VTY+TI+D LCK+G +  A+ L + MK   + P+  
Sbjct: 226 DAVEFLNVMGKYN------CSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRN 279

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TYN L++G C      EA  +   M    + P V T+N++++ LC   +++EA +L D M
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
               + P+  +YNTL++G     KI+ A +L   M   G K + V++NI++  YCK  ++
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM 399

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A +   +M   G  P  VTYNTL  G  +   +  A +  DEM R  +  D+ T  T 
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +  LC+   + EA +L  + R     +D  +Y  LI G  K G +  A +L+  +    +
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+ VTYN +I GLC  G+ ++A     ++ E+   PD  T++ ++HG+ R  +  K  +
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
             +KM E    PD    +I++  L    +  K+L  F     +G+ 
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKA 625



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 244/543 (44%), Gaps = 57/543 (10%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNILI 103
           +A    + M + + SP  V+   IL     K +  D R     + + GL PN  TYNIL+
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             +CK+G +         + ++   P+  T+N LI GL  E RI EA  L  +++     
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV---------CK---------- 204
           P+V++YNTLING         A  L EEM+    +   V         CK          
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 205 ----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                     P+ VTY+T+I+G CK G + +A     +M  +N+  D VT N+++  LC 
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                EA +L      +G     V++  ++    K+  +D A +L D M ++ + P+  T
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN ++ G C  GK  +A      +   G   D+ +YN +++GYC+  +VE+A   + +MV
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
               KP V T N L  GL     +E ALKLF+     G A DT TY T I  LCK G + 
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC------SLPHGVL----- 483
           +A  L   +   +   D   YN +I  L  SGR++ A E         +LP  VL     
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKN 705

Query: 484 ------------VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
                         + V Y+  I+ LC +G+   A  +F + ++     D  T+  L+ G
Sbjct: 706 ETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765

Query: 532 FIR 534
            I+
Sbjct: 766 LIK 768



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 36/274 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASL---AKNKHYDTRLNA---TGLFPNLYTYNI 101
           + A  ++D M      P  V+ +N ++  L    K +   ++LN    +GL P+  TYN 
Sbjct: 505 DRALKLWDEMKEKEIIPSTVT-YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++ +C+ G V   F    +++ + F P+  T N L++GL  E  + +A  LF    + G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              + +TYNTLI  LC+ G    A NL  EM     E+G    P+  TY+ II  L   G
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK--ELG----PDHYTYNAIITALTDSG 677

Query: 222 FVDKAKALFLQMKDENINPD-----------------------VVTYNSLIHGLCHANDW 258
            + +A+    +M ++   PD                        V Y+  I  LC    +
Sbjct: 678 RIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKY 737

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            +A R+F E   +G+     T+  +MD L K RK
Sbjct: 738 KDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 274/530 (51%), Gaps = 14/530 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCF 106
           ++D+M R     P      +++ SL ++K +D  L+        G  P+   Y   +   
Sbjct: 18  LYDFM-RQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
            K+G + L    F  + R    PN   +N LI GL  E RI +A  LF ++      PN 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +T+NTLI+G C+ G   +A+ L E M     E      P+ +T+++++ GLCK   +++A
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVE------PSIITFNSLLSGLCKARRIEEA 190

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDW-NEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           + +  ++K     PD  TY+ +  GL  ++D    A  L+ E + +GV+    T +++++
Sbjct: 191 RCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLN 250

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LCK  K+++A  +L  +V+ G+ P    YNT+++G+C +G ++RA      MES G + 
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP 310

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           + +++N +I+ +C+ + +++A    ++MV KGI P+V TYN L  G   +       ++ 
Sbjct: 311 NCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQIL 370

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           +EM+ +G   +  +Y + I+ LCK+G I+EA  + R +       +   YN LIDG C  
Sbjct: 371 EEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTV 430

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G+L+ A   F  +    +   +VTYN +I+GLC  G++ +A ++F  +      PDVIT+
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITY 490

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
           + LI G+       K  EL   MK+  + P  +    ++    K  I LK
Sbjct: 491 NSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK 540



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 173/579 (29%), Positives = 282/579 (48%), Gaps = 54/579 (9%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A  +F+ M R     P V  +N+L+  L K K           ++   L PN  T+N LI
Sbjct: 85  AMELFETMKR-RKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLI 143

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +CK G V +      R+ +    P+  TFNSL+ GL    RI EA  +  ++K  G  
Sbjct: 144 DGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFV 203

Query: 164 PNVITYNTLINGLCRTGHTM-IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           P+  TY+ + +GL ++      AL+L+ E       IG   K +  T S +++GLCKEG 
Sbjct: 204 PDGFTYSIIFDGLLKSDDGAGAALDLYREA------IGKGVKIDNYTCSILLNGLCKEGK 257

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V+KA+ +   + +  + P  V YN++++G C   D + A     +M  +G++P+ + FN 
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNS 317

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D+ C+ + +D+A   +  MV +G+ P+  TYN L+DG+  +   +R  ++   ME  G
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K + +SY  LIN  CK+ ++ EA  + R+MV +G+ P    YN L  G   + ++  AL
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA-------------------------- 436
           + FDEM ++G+ A   TY + I GLCK G + EA                          
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 437 ---------VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
                    +EL+ T++ L  +  I  ++ LI G  K G +K    LF  +    L P+ 
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDR 556

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V YN MI      G + KA  L  +M +    PD  T++ LI G ++  + S+  +L+  
Sbjct: 557 VVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDD 616

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           MK K ++P+A   S    LL++    LK      V  R+
Sbjct: 617 MKAKGLIPEADTYS----LLIQGHCDLKDFNGAYVWYRE 651



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 203/427 (47%), Gaps = 7/427 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P    YN ++N +C+IG +    +   ++      PN   FNS+I        I +A
Sbjct: 272 GLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKA 331

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                K+   G  P+V TYN LI+G  R         + EEM   NGE     KPN ++Y
Sbjct: 332 EEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEE-NGE-----KPNVISY 385

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            ++I+ LCK+G + +A+ +   M    + P+   YN LI G C      EA R F EM  
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+  ++VT+N ++  LCK  K+ EA  +  L+   G  P+  TYN+L+ G+   G   +
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
             EL+ +M+ +G K    +++ LI+G C  + ++   +L+ EM+   + P  V YN +  
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIH 564

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
              E   V+ A  L  EM   GV  D +TY + I G  K G + E  +L   ++      
Sbjct: 565 CYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIP 624

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   Y+ LI G C       A+  +  +     +PNV   N +  GL  DG++ +A+ + 
Sbjct: 625 EADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSIC 684

Query: 511 LDMEENA 517
            +M  N 
Sbjct: 685 SEMIANG 691



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 1/342 (0%)

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +   L+  M+ E   P       ++  L  +  ++    LF EM+  G +P  + +   M
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
               K   +  A  L + M +R V PN   YN L+ G C   +I  AE+LFG M      
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + V++N LI+GYCK  EV+ A+ L   M  + ++P+++T+N+L  GL +  ++E A  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCK-NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
            +E++ +G   D  TY+   DGL K +     A++L+R       ++D    + L++GLC
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K G+++ A E+  SL    LVP  V YN ++ G C  G MD+A      ME     P+ I
Sbjct: 254 KEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCI 313

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            F+ +I  F  +    K  E + KM  K + P     +I++D
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILID 355



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 208/425 (48%), Gaps = 8/425 (1%)

Query: 143 AESRI-MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
           +ES++  + + L+  ++  G  P+      ++  L  +      L+LF+EM      +G+
Sbjct: 7   SESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEM------VGL 60

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
             +P+ + Y   +    K G +  A  LF  MK   + P+V  YN LI GLC      +A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           ++LF EM  + + P+ VTFN ++D  CK  ++D A  L + M +  V P+  T+N+L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALSLYREMVSKGIKP 380
            C   +I  A  +   ++  G   D  +Y+I+ +G  K+ +    AL LYRE + KG+K 
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              T + L  GL +  +VE A ++   +   G+      Y T ++G C+ G +  A+   
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +       +  A+N +ID  C+   +  A E    +    + P+V TYNI+I G    
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
               +   +  +MEEN   P+VI++  LI+   +  +  +   +L  M  + V+P+A+I 
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420

Query: 561 SIVVD 565
           ++++D
Sbjct: 421 NMLID 425



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 42/370 (11%)

Query: 79  KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
           K + +  ++   G+ P++ TYNILI+ + ++   S  F     +  +   PN  ++ SLI
Sbjct: 330 KAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLI 389

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNG 197
             L  + +I+EA  +   +   G  PN   YN LI+G C  G    AL  F+EM+ NG G
Sbjct: 390 NCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIG 449

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                     VTY+++I GLCK G + +A+ +F  +      PDV+TYNSLI G  +A +
Sbjct: 450 -------ATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGN 502

Query: 258 WNEAKRLFIEMMDQGVQPSVVTF-------------------------NVIMDELCKNR- 291
             +   L+  M   G++P++ TF                         N+  D +  N  
Sbjct: 503 SQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAM 562

Query: 292 --------KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
                    + +A  L   MV  GVRP+  TYN+L+ G    GK++  ++L   M++ G 
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGL 622

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +  +Y++LI G+C  K+   A   YREM+  G  P V   N L  GL +  +++ A  
Sbjct: 623 IPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682

Query: 404 LFDEMQRDGV 413
           +  EM  +G+
Sbjct: 683 ICSEMIANGM 692



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 28/292 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G+ PN   YN+LI+  C +G++      F  + ++       T+NSLIKGL    ++ 
Sbjct: 410 GRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLK 469

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA--------------- 193
           EA  +F  + + G  P+VITYN+LI+G    G++   L L+E M                
Sbjct: 470 EAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI 529

Query: 194 NGNGEIGVVCK-------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +G  + G+  K             P+ V Y+ +I    + G V KA +L  +M D  + P
Sbjct: 530 SGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRP 589

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D  TYNSLI G       +E K L  +M  +G+ P   T+++++   C  +  + A    
Sbjct: 590 DNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWY 649

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             M++ G  PN C  N L  G    G++  A+ +   M + G  + D + ++
Sbjct: 650 REMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMDNLDTNEDL 701



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 2/281 (0%)

Query: 287 LCKNRKM-DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
           +C   KM  + S L D M Q G  P+      +++      K +   +LF  M  +G + 
Sbjct: 5   VCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRP 64

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D + Y   +    K  +++ A+ L+  M  + + P V  YN L  GL +  ++  A KLF
Sbjct: 65  DKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM    +  +  T+ T IDG CK G +  A+ L   ++  K E  I  +N L+ GLCK+
Sbjct: 125 GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC-NDGQMDKARDLFLDMEENAAAPDVIT 524
            R++ A  +   +     VP+  TY+I+  GL  +D     A DL+ +        D  T
Sbjct: 185 RRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT 244

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +L++G  +  +  K  E+L  + E  ++P   I + +V+
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 1/215 (0%)

Query: 358 CKNKEVEEALS-LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           C   ++   +S LY  M  +G  P+      +   L E  + ++ L LF EM   G   D
Sbjct: 6   CSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPD 65

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y   +    K G +  A+ELF T++  K   ++  YN LI GLCK  R++ A +LF 
Sbjct: 66  KLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFG 125

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    LVPN VT+N +I G C  G++D A  L   M++    P +ITF+ L+ G  +  
Sbjct: 126 EMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKAR 185

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +   +L+++K    +PD    SI+ D L+K++
Sbjct: 186 RIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSD 220



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNIL 102
            +AF +   M+ M   P   +  +++L  L + K  +T+     + A GL P   TY++L
Sbjct: 573 QKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLL 632

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           I   C +   +  ++ +  +L + F PN    N L  GL  + R+ EA ++ +++ A G
Sbjct: 633 IQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 260/543 (47%), Gaps = 25/543 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTY 99
           P+ A   FD+          V S+N LL  L K+ H       Y   L+ +G  PNL T+
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLH-SGCSPNLVTF 65

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            ILI   CK G+ +        +      P+   FN LI GL  +    +A  LF  +++
Sbjct: 66  KILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMES 125

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID-GLC 218
               P++ TYNT+I+GLC++G+   A  L EEM    G+      P+ VTY+T+I+ G+C
Sbjct: 126 SRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGK----SAPDIVTYNTLINAGIC 181

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+G V++A  +   MK     PDV+TYNS+IH LC A    EA  +   M      P +V
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLV 238

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFN ++D  CK   +  A  +L+ M +  + P+  TY  L++G C +G++  A  L   +
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---------VSKGIKPTVVTYNTLF 389
              G   D ++Y  L++G CK+ E+EEA  L +EM         VS  + P + TYN + 
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +   +  A+ L  ++   G   D  TY T IDGLCK   + EA +L   +  L C 
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +      ++ GLC+ GR+  AW L   +      PNVV Y  +I GLC   +MD A  +
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M     A D   +  LI   I     ++   +  +M  +  +PD S    + +  + 
Sbjct: 479 LDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMS 538

Query: 570 NEI 572
           N +
Sbjct: 539 NSV 541



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 173/356 (48%), Gaps = 10/356 (2%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR--LNATGLFPN 95
           ++GD+      EA  I D M    P+P  ++  +I+ A     +  +    L      P+
Sbjct: 182 KDGDVE-----EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPD 236

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L T+N L++ FCK G +         + R    P+  T+  L+ GL    ++  A  L  
Sbjct: 237 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE 296

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---GEIGVVCKPNTVTYST 212
           ++   G  P+VI Y +L++GLC++G    A  L +EM+        + +   P   TY+ 
Sbjct: 297 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNI 356

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ GL K+G + KA +L   +      PDVVTYN+LI GLC AN   EA  L  EM   G
Sbjct: 357 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLG 416

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P+ VT   ++  LC+  ++D+A  L+  M ++   PN   Y +L+DG C   +++ A 
Sbjct: 417 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 476

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +  +M   G   DD +Y  LI        V EA+++Y EMV++G  P   T  TL
Sbjct: 477 VVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 245/468 (52%), Gaps = 9/468 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++     LI  FC++G+          +  S   P+  T+N +I G      I  A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            ++  ++      P+V+TYNT++  LC +G    A+ + + M   +      C P+ +TY
Sbjct: 192 LSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITY 242

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+  C++  V  A  L  +M+D    PDVVTYN L++G+C     +EA +   +M  
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G QP+V+T N+I+  +C   +  +A +LL  M+++G  P+  T+N L++  C  G + R
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++   M   GC+ + +SYN L++G+CK K+++ A+     MVS+G  P +VTYNT+  
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +VE A+++ +++   G +    TY T IDGL K G   +A++L   +R    + 
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y+ L+ GL + G++  A + F       + PN VT+N ++ GLC   Q D+A D  
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           + M      P+  ++ +LI G        +  ELL+++  K +M  +S
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 207/422 (49%), Gaps = 11/422 (2%)

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           +  N  +  + RTG         E M  +GN        P+ +  +T+I G C+ G   K
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGN-------VPDIIPCTTLIRGFCRLGKTRK 155

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  +   ++     PDV+TYN +I G C A + N A  +   M    V P VVT+N I+ 
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR 212

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LC + K+ +A  +LD M+QR   P+  TY  L++  C    +  A +L   M   GC  
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D V+YN+L+NG CK   ++EA+    +M S G +P V+T+N +   +    +   A KL 
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            +M R G +    T+   I+ LC+ G +  A+++   +    C+ +  +YN L+ G CK 
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            ++  A E    +      P++VTYN M+  LC DG+++ A ++   +     +P +IT+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           + +I G  +  +  K  +LL +M+ K + PD    S +V  L +     +++  F   ER
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512

Query: 586 QG 587
            G
Sbjct: 513 MG 514


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 158/562 (28%), Positives = 261/562 (46%), Gaps = 71/562 (12%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           +F  M   +   P V ++ +++ +L +    D        L  +G+ P + TYN+L++  
Sbjct: 202 VFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDAL 261

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+ GRV   F   GR++     P+  TF  LI GL    R  E  A+  +++ FG  PN 
Sbjct: 262 CRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNE 321

Query: 167 ITYNTLINGLCRTGH------------------TMIALNL-----------------FEE 191
           + YN LI   CR GH                  T++  NL                  +E
Sbjct: 322 VIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDE 381

Query: 192 MA-------------------NGNGEIGVVC-----------KPNTVTYSTIIDGLCKEG 221
           M                     G G + VV            KPN    +  I  LCK G
Sbjct: 382 MLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRG 441

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++A  ++  +  + +  ++ T N+LIHGLC  N+  EA ++   M+D GV+   +T+N
Sbjct: 442 KHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN 501

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++   CK  KM+EA +L D M++RG +P+  T+NT +  +C +GK+     L   M+S 
Sbjct: 502 IMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSE 561

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G K D V+Y  +I+GYCK K+V +A     E++  G++P  V YN L  G      +  A
Sbjct: 562 GLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDA 621

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           + + D M+ +G+     TY + +  +C  G + EA E+F    +   EL +  Y  +I G
Sbjct: 622 IGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQG 681

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            CK G++  A   F  + +  + PN +TY  ++   C  G  ++A  LF +M  +   PD
Sbjct: 682 FCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741

Query: 522 VITFDMLIHGFIRINEPSKVNE 543
            ++++ LI G   ++   K+ E
Sbjct: 742 TVSYNTLISGCCEVDSLDKIVE 763



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 224/471 (47%), Gaps = 8/471 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-SCFTPNAATFNSLIKGLHAES 145
           L+  G  P++ T NIL+      G++ L    FG +   +   P+  T+  +IK L    
Sbjct: 171 LSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAG 230

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I  A  +  +L+  G +P V+TYN L++ LCR+G    A  L   M  G        +P
Sbjct: 231 EIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR------LRP 284

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VT+  +I+GL +     +  A+  +M+   I P+ V YN LI   C     +EA RLF
Sbjct: 285 SIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLF 344

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL- 324
            EM+ +G++ +VVT+N+I   LCK  +M+ A ++LD M+  G+  +   +N+++      
Sbjct: 345 DEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRG 404

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+++    L   M +   K +D      I   CK  + EEA  ++  ++ KG+   + T
Sbjct: 405 TGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIAT 464

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            N L  GL + + ++ A K+   M   GV  D  TY   I   CK   + EA++L   + 
Sbjct: 465 SNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMI 524

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + D+  +N  +   C  G+++    L   +    L P++VTY  +I G C    + 
Sbjct: 525 KRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVH 584

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           KA    +++ +N   P+ + ++ LI G+ R    S    +L  MK   + P
Sbjct: 585 KANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQP 635



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 204/417 (48%), Gaps = 6/417 (1%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           AA  F +L   G  P++ T N L+  L   G   +A  +F EM +GN        P+  T
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNA-----VAPDVYT 218

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +I  LC+ G +D A  +  +++   I P VVTYN L+  LC +    EA +L   M+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +  ++PS+VTF ++++ L + ++  E   +L  M   G+ PN   YN L+   C  G  +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  M S G K   V+YN++    CK  E+E A  +  EM+  G+      +N++ 
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 390 -LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L    +++  L+L  EM    +  +    T  I  LCK G   EA E++  +     
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
            ++I   N LI GLC+   +K A ++  ++    +  + +TYNIMIQ  C   +M++A  
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           L  DM +    PD+ TF+  +  +  + +   +  LL +MK + + PD      ++D
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIID 575



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  N+ T N LI+  C+   +         ++ S    +  T+N +I+     S++ EA
Sbjct: 457 GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEA 516

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   G +P++ T+NT +   C  G     L+L ++M +         KP+ VTY
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG------LKPDIVTY 570

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            TIIDG CK   V KA    +++    + P+ V YN+LI G       ++A  +   M  
Sbjct: 571 GTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKH 630

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+QP+ +T+N +M  +C    ++EA  +    + + +      Y  ++ GFC +GKI+ 
Sbjct: 631 NGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDE 690

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   F  M     + + ++Y  L+  YCK    EEA  L+ EMVS GI P  V+YNTL  
Sbjct: 691 AVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLIS 750

Query: 391 GLFEIHQVEHALKLFDEMQ 409
           G  E+  ++  ++   EM 
Sbjct: 751 GCCEVDSLDKIVESPAEMS 769



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 143/279 (51%), Gaps = 8/279 (2%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TYNI+I   CK  ++         +++  F P+  TFN+ ++      ++ +   L  ++
Sbjct: 499 TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM 558

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           K+ G +P+++TY T+I+G C+      A   L E + NG        +PN V Y+ +I G
Sbjct: 559 KSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNG-------LRPNAVIYNALIGG 611

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
             + G +  A  +   MK   I P  +TYNSL++ +CHA    EAK +F + + + ++  
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELG 671

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V+ + +I+   CK  K+DEA      M  R +RPN  TY TLM  +C  G    A +LF 
Sbjct: 672 VIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFD 731

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
            M S G   D VSYN LI+G C+   +++ +    EM S
Sbjct: 732 EMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 2/351 (0%)

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVT 279
           G +  A   FL++     +P + T N L+  L      + A+++F EM D   V P V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + V++  LC+  ++D A  +L  + + G++P   TYN LMD  C  G++  A +L G M 
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
               +   V++ ILING  + +   E  ++ +EM   GI P  V YN L           
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL+LFDEM   G+     TY      LCK G +  A ++   + +    +    +N ++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 460 DG-LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
              L  +GRL     L   +    L PN       IQ LC  G+ ++A +++  +     
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             ++ T + LIHG  + N   +  ++L  M +  V  D    +I++    K
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCK 509



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG-VLVPNVVTYNIMI 494
           A + F  L        I+  N L++ L   G+L  A ++F  +  G  + P+V TY +MI
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           + LC  G++D A  +  ++E +   P V+T+++L+    R     +  +L  +M E ++ 
Sbjct: 224 KALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLR 283

Query: 555 PDASIVSIVVDLLVKNE 571
           P      I+++ L + +
Sbjct: 284 PSIVTFGILINGLARGQ 300


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 152/439 (34%), Positives = 238/439 (54%), Gaps = 13/439 (2%)

Query: 71  NILLASLAKNKH----YDTRLNA-TGLF-PNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           N LL++  + K     YD   N   GL  P+  TY+ LIN FCK       +     + +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P+ A +N++IKGL    R+  A   +  ++   C P+VITY  L++ LC++     
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISD 120

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A  + E+M      I   C PN VTY+T+I+G CK G +D+A  LF QM + + +PDV T
Sbjct: 121 ASLILEDM------IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN LI G C      +  +L  EM+  G +P+ +T+N +MD L K+ K  +A  L  +M+
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +R  +P+  T+N ++D FC +G+++ A ELF  M   GC  D  +YNI+I+G C+   ++
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L   M   G  P VVTYN++  GL +  QV+ A ++++ ++  G   D  T +T I
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           DGLCK+  + +A +L R +       D+ AY  LI G CK+ +L  +   F  +     V
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414

Query: 485 PNVVTYNIMIQGLCNDGQM 503
           P V+TY+I+I  LC   ++
Sbjct: 415 PTVITYSIVIDKLCKSARV 433



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 228/454 (50%), Gaps = 7/454 (1%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N L++ F +  +    +  F   L    +P++ T+++LI G        +A  L  +++ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  P+   YNT+I GLC  G    AL  + +M          C P+ +TY+ ++D LCK
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-------CAPSVITYTILVDALCK 114

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              +  A  +   M +    P+VVTYN+LI+G C   + +EA  LF +M++    P V T
Sbjct: 115 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N+++D  CK  +  + ++LL  MV+ G  PN  TYNTLMD     GK   A  L   M 
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
              CK    ++N++I+ +CK  +++ A  L++ M  +G  P + TYN +  G    ++++
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A +L + M   G   D  TY + + GLCK   + EA E++  LR     LD+   + LI
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DGLCKS RL  A +L   +      P+VV Y I+I G C   Q+DK+   F +M +    
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           P VIT+ ++I    +         LL  M E+ V
Sbjct: 415 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 230/436 (52%), Gaps = 7/436 (1%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N L+     + +  EA  LF       C P+ ITY+TLING C+      A  L +EM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME- 60

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
              + G+V  P+   Y+TII GLC  G VD A   +  M+  +  P V+TY  L+  LC 
Sbjct: 61  ---KRGIV--PHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCK 114

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           +   ++A  +  +M++ G  P+VVT+N +++  CK   MDEA  L + M++    P+  T
Sbjct: 115 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN L+DG+C   +     +L   M   GC+ + ++YN L++   K+ +  +A +L + M+
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            +  KP+  T+N +     ++ Q++ A +LF  M   G   D  TY   I G C+   I 
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           +A +L   +    C  D+  YN ++ GLCK+ ++  A+E++  L +G    +VVT + +I
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLC   ++D A  L  +ME N +APDV+ + +LIHGF + ++  K      +M +K  +
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414

Query: 555 PDASIVSIVVDLLVKN 570
           P     SIV+D L K+
Sbjct: 415 PTVITYSIVIDKLCKS 430



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 218/428 (50%), Gaps = 14/428 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            EA+ +F   L    SP  ++ ++ L+    K + +         +   G+ P+   YN 
Sbjct: 15  QEAYDLFKNHLCGLCSPDSIT-YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNT 73

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I   C  GRV    + +  + R C  P+  T+  L+  L   +RI +A+ +   +   G
Sbjct: 74  IIKGLCDNGRVDSALVHYRDMQRHC-APSVITYTILVDALCKSARISDASLILEDMIEAG 132

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PNV+TYNTLING C+ G+   A+ LF +M   +      C P+  TY+ +IDG CK+ 
Sbjct: 133 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS------CSPDVFTYNILIDGYCKQE 186

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
                  L  +M      P+ +TYN+L+  L  +  + +A  L   M+ +  +PS  TFN
Sbjct: 187 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 246

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  CK  ++D A  L  LM  RG  P+  TYN ++ G C   +I+ A +L   M   
Sbjct: 247 LMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA 306

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D V+YN +++G CK  +V+EA  +Y  + + G    VVT +TL  GL +  +++ A
Sbjct: 307 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 366

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            KL  EM+R+G A D   YT  I G CK   + +++  F  +    C   +  Y+ +ID 
Sbjct: 367 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 426

Query: 462 LCKSGRLK 469
           LCKS R++
Sbjct: 427 LCKSARVR 434



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 126/355 (35%), Positives = 197/355 (55%), Gaps = 12/355 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+ +L K+            +   G  PN+ TYN LIN FCK+G +    + 
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++L +  +P+  T+N LI G   + R  + A L  ++  +GCEPN ITYNTL++ L +
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G  + A NL + M   +      CKP+  T++ +ID  CK G +D A  LF  M D   
Sbjct: 220 SGKYIDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ TYN +I G C AN  ++A++L   M + G  P VVT+N I+  LCK  ++DEA  
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + +++   G   +  T +TL+DG C   +++ AE+L   ME  G   D V+Y ILI+G+C
Sbjct: 334 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           K  +++++L+ + EM+ KG  PTV+TY+ +   L +  +V     L   M   GV
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 191/384 (49%), Gaps = 11/384 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL-----NATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P  + +N ++  L  N   D+ L           P++ TY IL++  CK  R+S   +  
Sbjct: 66  PHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLIL 125

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             ++ +   PN  T+N+LI G      + EA  LF ++    C P+V TYN LI+G C+ 
Sbjct: 126 EDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQ 185

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                   L +EM      +   C+PN +TY+T++D L K G    A  L   M   +  
Sbjct: 186 ERPQDGAKLLQEM------VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P   T+N +I   C     + A  LF  M D+G  P + T+N+++   C+  ++D+A +L
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L+ M + G  P+  TYN+++ G C   +++ A E++  + + G   D V+ + LI+G CK
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           ++ +++A  L REM   G  P VV Y  L  G  +  Q++ +L  F EM   G      T
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419

Query: 420 YTTFIDGLCKNGYIIEAVELFRTL 443
           Y+  ID LCK+  + +   L +T+
Sbjct: 420 YSIVIDKLCKSARVRDGCMLLKTM 443


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 253/528 (47%), Gaps = 37/528 (7%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           SF  LL  L K    D       ++  +G+ P+L T+N +IN  CK GRV    +    I
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
            R    PNA T+ SLI G      +  A A+F ++   GC+PN +TY+TLINGLC  G  
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 183 MIALNLFEEMANGNGEIGVV-----------------------------CKPNTVTYSTI 213
             A+++ EEM     E  V                              C PN  T++ +
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I GL ++G  + A  L+ +M  + + P  VTYN+LI+ LC    +  A  +F  M+  G 
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            PS  T+N I+   C    + +A  + D M++ G  PN  TYNTL+ G+C  G +N A  
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M+  G K D  +Y  LI+G+ +  ++E A SL+  M+  GI P  VTY  +  G F
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
            + +V+ AL LF +M   G    ++TY   I G  K   I EA      +       ++ 
Sbjct: 529 NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR--DLFL 511
            Y   IDGLC++GR   A+++F  +      PN+ TY+ +I GLC +G+ + A   +L  
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            +      P+V T+  L+ G        + ++L+  M++K + P   I
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 159/510 (31%), Positives = 253/510 (49%), Gaps = 49/510 (9%)

Query: 65  PPVSSFNILLASL-AKNKHYDTRLNATGLF-----PNLYTYNILINCFCKIGRVSLGFIA 118
           P + +FN ++  L  K +  + +L  + +F     PN +TY  LI   C+   + L F  
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRI------------------------------- 147
           F R+++    PN+ T+++LI GL +E R+                               
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319

Query: 148 ----MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
                EA  L  K+K  GC PN+ T+  LI+GL R G   IA+ L+ +M       G+V 
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV- 374

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P TVTY+ +I+ LC EG  + A  +F  M      P   TYN +I   C   D  +A  
Sbjct: 375 -PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F +M+  G  P+V+T+N ++   CK   ++ A RLL++M   G++P+A TY  L+ GF 
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             GK+  A  LF  M   G   + V+Y  +I+GY    +V++AL+L+ +MV  G  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN +  G  + + +  A     +M + G+  +  TYT+FIDGLC+NG    A ++F  +
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFA--WELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                  ++  Y+ LI GLC+ GR + A  + L   L H    PNV TY  +++GLC +G
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           +  +A  L + M++    P    +  L+ G
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 258/529 (48%), Gaps = 17/529 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILI 103
           AF +FD M++    P  V+ ++ L+  L      +  ++        G+ P +YTY I +
Sbjct: 256 AFAMFDRMVKDGCDPNSVT-YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL 314

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
              C  G  S      G++ +    PN  TF +LI GL  + +   A  L+ K+ A G  
Sbjct: 315 VSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P  +TYN LIN LC  G    A  +F+ M + +G +     P+T TY+ II   C  G +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLS-HGSL-----PSTQTYNEIIKCFCLMGDI 428

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            KA  +F +M     +P+V+TYN+LI+G C   + N A RL   M   G++P   T+  +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +    +  K++ A+ L   M++ G+ PN  TY  ++DG+  + K++ A  LF  M   G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
                +YN++I+G+ K   + EA +   +MV +G+ P V+TY +   GL    +   A K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK---CELDIQAYNCLID 460
           +F EM++     +  TY++ I GLC+ G   E  E++  L  L    CE ++  Y  L+ 
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRA-EDAEMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLC  GR   A +L  S+    L P+   Y  ++ G C + +++ A ++F  M+      
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  LI    + N   +   +   M EK    D  + ++++D L+K
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLK 776



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 238/507 (46%), Gaps = 45/507 (8%)

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L ++  L+    K   V L    + ++L S   P+  TFN++I  L  + R+ EA  + +
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
            +  +   PN  TY +LI G CR  +  +A  +F+ M          C PN+VTYST+I+
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG------CDPNSVTYSTLIN 280

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTY------------------------------ 245
           GLC EG +++A  +  +M  + I P V TY                              
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP 340

Query: 246 -----NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
                 +LI GL     +  A  L+ +M+  G+ P+ VT+N ++++LC   + + A  + 
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M+  G  P+  TYN ++  FCLMG I +A  +F  M   G   + ++YN LI GYCK 
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQ 460

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +  A+ L   M   G+KP   TY  L  G     ++EHA  LF  M   G++ +  TY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LP 479
           T  IDG      + +A+ LF  +         Q YN +I G  K+  +  A E FC  + 
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA-ENFCGKMV 579

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN--E 537
              L+PNV+TY   I GLC +G+   A  +F +ME+    P++ T+  LI+G  +    E
Sbjct: 580 KQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAE 639

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
            +++  LL ++      P+    + +V
Sbjct: 640 DAEMYNLLARLTHYGCEPNVDTYTTLV 666



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 221/438 (50%), Gaps = 6/438 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           +F +L+  L     +  A  ++ K+   G  P+++T+NT+IN LC+ G    A  +   +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              +        PN  TY+++I G C+   +D A A+F +M  +  +P+ VTY++LI+GL
Sbjct: 229 FRYDA------YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  +  EM+ +G++P+V T+ + +  LC      EA  LL  M +RG  PN 
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            T+  L+ G    GK   A  L+  M + G     V+YN LIN  C     E A ++++ 
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+S G  P+  TYN +      +  ++ A+ +FD+M + G + +  TY T I G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A+ L   ++    + D   Y  LI G  + G+L+ A  LF  +    + PN VTY  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G  N  ++D A  LF  M E+   P   T++++I GF + N  S+      KM ++ 
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 553 VMPDASIVSIVVDLLVKN 570
           ++P+    +  +D L +N
Sbjct: 583 LLPNVITYTSFIDGLCRN 600



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 213/473 (45%), Gaps = 43/473 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +F  L++ L+++  ++       ++ A GL P   TYN LIN  C  GR    F  
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L     P+  T+N +IK       I +A  +F K+   G  PNVITYNTLI G C+
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK 459

Query: 179 TGHTMIALNLFEEMANGNG--------------------------------EIGVVCKPN 206
            G+   A+ L E M  GNG                                E G+   PN
Sbjct: 460 QGNLNNAMRLLEIM-KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI--SPN 516

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ IIDG      VD A ALF +M +    P   TYN +I G    N  +EA+    
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ QG+ P+V+T+   +D LC+N +   A ++   M +R   PN  TY++L+ G C  G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 327 KINRAE--ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +   AE   L   +   GC+ +  +Y  L+ G C      EA  L   M  KG++P+   
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L +G  +  +VE AL +F  M   G       Y   I  LCK  +I EA  +F+T+ 
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
                 D   +  L+DGL K G      +L   +       N  TY ++ + L
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 202/416 (48%), Gaps = 20/416 (4%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLF 93
           GDI      +A  IFD ML+   S P V ++N L+    K  + +  +         GL 
Sbjct: 426 GDIQ-----KAMVIFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ +TY  LI+ F + G++      F  ++    +PN  T+ ++I G    +++ +A AL
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F K+   G  P+  TYN +I+G  +T     A N   +M       G++  PN +TY++ 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ----GLL--PNVITYTSF 593

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK--RLFIEMMDQ 271
           IDGLC+ G    A  +F +M+  N  P++ TY+SLI+GLC      +A+   L   +   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G +P+V T+  ++  LC   +  EA +L+  M ++G++P+   Y  L+ G C   K+  A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +F SM+++G +     Y  LI   CK   +EEA  +++ M+ K      V +  L  G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L +  + +  LKL   M+      + +TY      L      I+  ++ + L I+K
Sbjct: 774 LLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQLGIVK 829



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 37/318 (11%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE--- 332
           ++ +F  ++ +L K   +D A  +   M+  G+RP+  T+NT+++  C  G++  A+   
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 333 --------------------------------ELFGSMESMGCKHDDVSYNILINGYCKN 360
                                            +F  M   GC  + V+Y+ LING C  
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +EEA+ +  EMV KGI+PTV TY    + L +      A++L  +M++ G   + +T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF-CSLP 479
           T  I GL ++G    A+ L+  +           YN LI+ LC  GR + A+ +F   L 
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           HG L P+  TYN +I+  C  G + KA  +F  M +  ++P+VIT++ LI+G+ +    +
Sbjct: 406 HGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 540 KVNELLHKMKEKKVMPDA 557
               LL  MK   + PDA
Sbjct: 465 NAMRLLEIMKGNGLKPDA 482


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 253/528 (47%), Gaps = 37/528 (7%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           SF  LL  L K    D       ++  +G+ P+L T+N +IN  CK GRV    +    I
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
            R    PNA T+ SLI G      +  A A+F ++   GC+PN +TY+TLINGLC  G  
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 183 MIALNLFEEMANGNGEIGVV-----------------------------CKPNTVTYSTI 213
             A+++ EEM     E  V                              C PN  T++ +
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I GL ++G  + A  L+ +M  + + P  VTYN+LI+ LC    +  A  +F  M+  G 
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            PS  T+N I+   C    + +A  + D M++ G  PN  TYNTL+ G+C  G +N A  
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M+  G K D  +Y  LI+G+ +  ++E A SL+  M+  GI P  VTY  +  G F
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
            + +V+ AL LF +M   G    ++TY   I G  K   I EA      +       ++ 
Sbjct: 529 NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR--DLFL 511
            Y   IDGLC++GR   A+++F  +      PN+ TY+ +I GLC +G+ + A   +L  
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            +      P+V T+  L+ G        + ++L+  M++K + P   I
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 159/510 (31%), Positives = 253/510 (49%), Gaps = 49/510 (9%)

Query: 65  PPVSSFNILLASL-AKNKHYDTRLNATGLF-----PNLYTYNILINCFCKIGRVSLGFIA 118
           P + +FN ++  L  K +  + +L  + +F     PN +TY  LI   C+   + L F  
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRI------------------------------- 147
           F R+++    PN+ T+++LI GL +E R+                               
Sbjct: 260 FDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319

Query: 148 ----MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
                EA  L  K+K  GC PN+ T+  LI+GL R G   IA+ L+ +M       G+V 
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV- 374

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P TVTY+ +I+ LC EG  + A  +F  M      P   TYN +I   C   D  +A  
Sbjct: 375 -PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F +M+  G  P+V+T+N ++   CK   ++ A RLL++M   G++P+A TY  L+ GF 
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             GK+  A  LF  M   G   + V+Y  +I+GY    +V++AL+L+ +MV  G  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN +  G  + + +  A     +M + G+  +  TYT+FIDGLC+NG    A ++F  +
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFA--WELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                  ++  Y+ LI GLC+ GR + A  + L   L H    PNV TY  +++GLC +G
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           +  +A  L + M++    P    +  L+ G
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIG 703



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 257/529 (48%), Gaps = 17/529 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILI 103
           AF +FD M++    P  V+ ++ L+  L      +  ++        G+ P +YTY I +
Sbjct: 256 AFAMFDRMVKDGCDPNSVT-YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL 314

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
              C  G  S      G++ +    PN  TF +LI GL  + +   A  L+ K+ A G  
Sbjct: 315 VSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P  +TYN LIN LC  G    A  +F+ M + +G +     P+T TY+ II   C  G +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLS-HGSL-----PSTQTYNEIIKCFCLMGDI 428

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            KA  +F +M     +P+V+TYN+LI+G C   + N A RL   M   G++P   T+  +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +    +  K++ A+ L   M++ G+ PN  TY  ++DG+  + K++ A  LF  M   G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
                +YN++I+G+ K   + EA +   +MV +G+ P V+TY +   GL    +   A K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK---CELDIQAYNCLID 460
           +F EM++     +  TY++ I GLC+ G   E  E++  L  L    CE ++  Y  L+ 
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRA-EDAEMYNLLARLTHYGCEPNVDTYTTLVK 667

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLC  GR   A +L  S+    L P+   Y  ++ G C + +++ A ++F  M+      
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  LI    + N   +   +   M EK    D    ++++D L+K
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLK 776



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 238/507 (46%), Gaps = 45/507 (8%)

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           L ++  L+    K   V L    + ++L S   P+  TFN++I  L  + R+ EA  + +
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
            +  +   PN  TY +LI G CR  +  +A  +F+ M          C PN+VTYST+I+
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG------CDPNSVTYSTLIN 280

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTY------------------------------ 245
           GLC EG +++A  +  +M  + I P V TY                              
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP 340

Query: 246 -----NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
                 +LI GL     +  A  L+ +M+  G+ P+ VT+N ++++LC   + + A  + 
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M+  G  P+  TYN ++  FCLMG I +A  +F  M   G   + ++YN LI GYCK 
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQ 460

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +  A+ L   M   G+KP   TY  L  G     ++EHA  LF  M   G++ +  TY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LP 479
           T  IDG      + +A+ LF  +         Q YN +I G  K+  +  A E FC  + 
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA-ENFCGKMV 579

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN--E 537
              L+PNV+TY   I GLC +G+   A  +F +ME+    P++ T+  LI+G  +    E
Sbjct: 580 KQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAE 639

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
            +++  LL ++      P+    + +V
Sbjct: 640 DAEMYNLLARLTHYGCEPNVDTYTTLV 666



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 221/438 (50%), Gaps = 6/438 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           +F +L+  L     +  A  ++ K+   G  P+++T+NT+IN LC+ G    A  +   +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              +        PN  TY+++I G C+   +D A A+F +M  +  +P+ VTY++LI+GL
Sbjct: 229 FRYDA------YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  +  EM+ +G++P+V T+ + +  LC      EA  LL  M +RG  PN 
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            T+  L+ G    GK   A  L+  M + G     V+YN LIN  C     E A ++++ 
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+S G  P+  TYN +      +  ++ A+ +FD+M + G + +  TY T I G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A+ L   ++    + D   Y  LI G  + G+L+ A  LF  +    + PN VTY  
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTA 522

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G  N  ++D A  LF  M E+   P   T++++I GF + N  S+      KM ++ 
Sbjct: 523 IIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582

Query: 553 VMPDASIVSIVVDLLVKN 570
           ++P+    +  +D L +N
Sbjct: 583 LLPNVITYTSFIDGLCRN 600



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 214/473 (45%), Gaps = 43/473 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +F  L++ L+++  ++       ++ A GL P   TYN LIN  C  GR    F  
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L     P+  T+N +IK       I +A  +F K+   G  PNVITYNTLI G C+
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK 459

Query: 179 TGHTMIALNLFEEMANGNG--------------------------------EIGVVCKPN 206
            G+   A+ L E M  GNG                                E G+   PN
Sbjct: 460 QGNLNNAMRLLEIM-KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI--SPN 516

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ IIDG      VD A ALF +M +    P   TYN +I G    N  +EA+    
Sbjct: 517 HVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ QG+ P+V+T+   +D LC+N +   A ++   M +R   PN  TY++L+ G C  G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 327 KINRAE--ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +   AE   L   +   GC+ +  +Y  L+ G C      EA  L   M  KG++P+   
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L +G  +  +VE AL +F  M   G       Y   I  LCK  +I EA  +F+T+ 
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
                 D  A+  L+DGL K G      +L   +       N  TY ++ + L
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 202/416 (48%), Gaps = 20/416 (4%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLF 93
           GDI      +A  IFD ML+   S P V ++N L+    K  + +  +         GL 
Sbjct: 426 GDIQ-----KAMVIFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ +TY  LI+ F + G++      F  ++    +PN  T+ ++I G    +++ +A AL
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F K+   G  P+  TYN +I+G  +T     A N   +M       G++  PN +TY++ 
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ----GLL--PNVITYTSF 593

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK--RLFIEMMDQ 271
           IDGLC+ G    A  +F +M+  N  P++ TY+SLI+GLC      +A+   L   +   
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G +P+V T+  ++  LC   +  EA +L+  M ++G++P+   Y  L+ G C   K+  A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +F SM+++G +     Y  LI   CK   +EEA  +++ M+ K      V +  L  G
Sbjct: 714 LNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L +  + +  LKL   M+      + +TY      L      I+  ++ + L I+K
Sbjct: 774 LLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQLGIVK 829



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 37/318 (11%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE--- 332
           ++ +F  ++ +L K   +D A  +   M+  G+RP+  T+NT+++  C  G++  A+   
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 333 --------------------------------ELFGSMESMGCKHDDVSYNILINGYCKN 360
                                            +F  M   GC  + V+Y+ LING C  
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +EEA+ +  EMV KGI+PTV TY    + L +      A++L  +M++ G   + +T+
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF-CSLP 479
           T  I GL ++G    A+ L+  +           YN LI+ LC  GR + A+ +F   L 
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           HG L P+  TYN +I+  C  G + KA  +F  M +  ++P+VIT++ LI+G+ +    +
Sbjct: 406 HGSL-PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 540 KVNELLHKMKEKKVMPDA 557
               LL  MK   + PDA
Sbjct: 465 NAMRLLEIMKGNGLKPDA 482


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 260/502 (51%), Gaps = 15/502 (2%)

Query: 63  SP-PPVSSFNILLASLA-KNKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLG 115
           SP P +SS N+LL SL    +H D R     L A G  P+ + +N ++      G + + 
Sbjct: 117 SPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVA 176

Query: 116 FIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                R+ RS     P+A ++N +I GL    +  +A  +F ++   G  PN ITYNT+I
Sbjct: 177 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMI 236

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +G  + G       L ++M +         KPN VTY+ ++ GLC+ G +D+ +AL  +M
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGP------KPNVVTYNVLLSGLCRTGRMDETRALMDEM 290

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
              ++ PD  TY+ L  GL    +      LF E + +GV     T +++++ LCK+ K+
Sbjct: 291 ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A ++ +++V  G+ P    YNTL++G+C +  +  A  +F  M+S   + D ++YN L
Sbjct: 351 AKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING CK + V +A  L  EM   G+ P+V T+NTL        Q+E    +  +MQ+ G+
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
            +D  ++ + +   CKNG I EAV +   +       + Q YN +ID   +SG  + A  
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALL 530

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   + +  +  ++VTYN++++GLC   Q+D+A +L   +      PDV++++ +I    
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 534 RINEPSKVNELLHKMKEKKVMP 555
              +  K  ELL +M +  + P
Sbjct: 591 NKGDTDKALELLQEMNKYGIRP 612



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 263/525 (50%), Gaps = 20/525 (3%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVS-SFNILLASLAKN-------KHYDTRLNATG 91
           GD++V     A  +   M R   +PPP + S+N+++A L ++       K +D  ++  G
Sbjct: 171 GDLDV-----ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD-MG 224

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN  TYN +I+   K G +  GF    ++L     PN  T+N L+ GL    R+ E  
Sbjct: 225 VAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETR 284

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           AL  ++ +    P+  TY+ L +GL RTG +   L+LF E       +G        T S
Sbjct: 285 ALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY------TCS 338

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +++GLCK+G V KAK +F  +    + P  V YN+LI+G C   D   A  +F +M  +
Sbjct: 339 ILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            ++P  +T+N +++ LCK   + +A  L+  M + GV P+  T+NTL+D +   G++ + 
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +   M+  G K D +S+  ++  +CKN ++ EA+++  +M+ K + P    YN++   
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             E    E AL L ++M+  GV+A   TY   + GLC++  I EA EL  TLR      D
Sbjct: 519 YIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + +YN +I   C  G    A EL   +    + P + T + ++  L + G++     L+ 
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQ 638

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            M      P    + +++  ++R    SKV  L  +M EK +  D
Sbjct: 639 QMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 148/305 (48%), Gaps = 13/305 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           AFCIF+ M   H  P  ++ +N L+  L K     K  D    +  +G+ P++ T+N LI
Sbjct: 388 AFCIFEQMKSRHIRPDHIT-YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +   G++   F     + +     +  +F S++K      +I EA A+   +      
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN   YN++I+    +G T  AL L E+M N     GV    + VTY+ ++ GLC+   +
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNS----GV--SASIVTYNLLLKGLCRSSQI 560

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A+ L   ++++ + PDVV+YN++I   C+  D ++A  L  EM   G++P++ T + +
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTL 620

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L    ++ +   L   M+ + V P++  Y  ++D +      ++   L   M   G 
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680

Query: 344 KHDDV 348
             DD 
Sbjct: 681 AFDDT 685



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 4/316 (1%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           PS+ + N++++ L    +  +      L+V  G RP+   +N ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 335 FGSM-ESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
              M  S G    D  SYN++I G  ++ +  +AL ++ EMV  G+ P  +TYNT+  G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +   +E   +L D+M  DG   +  TY   + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 453 QAYNCLIDGLCKSGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             Y+ L DGL ++G  +    LF  SL  GV++    T +I++ GLC DG++ KA+ +F 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVML-GAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +      P  + ++ LI+G+ ++ +      +  +MK + + PD    + +++ L K E
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 572 ISLKSLPSFLVQERQG 587
           +  K+    +  E+ G
Sbjct: 419 MVTKAEDLVMEMEKSG 434


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 151/478 (31%), Positives = 242/478 (50%), Gaps = 13/478 (2%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           FP++ TYNIL+  F +  R+      F  +      PNAAT+ ++I+GL+   R+ EA A
Sbjct: 296 FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            F +        +VI+Y T+I GL  +     A  LFE++          C PN V Y+ 
Sbjct: 356 FFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAG------CSPNVVAYTA 403

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDGL K G ++     F  M   +  P   TY  +I GLC A    +A ++F +M+ +G
Sbjct: 404 VIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P  +T+  ++D   K  KMDEA +LLD+M+ +G  P A TY +++ GFC +  IN A+
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E+   M   GC+     +  L++ Y      EEA  +  EM ++G  P V+ Y +L   L
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F   +V  A  +FD M   G A D  TY T I    K G +  A E+   +       D 
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 643

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            AYN L+DG  K  R+  A+ ++  +    + PN VT+N+++ GL  DG+ D+A  LF +
Sbjct: 644 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 703

Query: 513 M-EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M E++   P ++++ +LI G  +    S+      +M ++ ++P+    + ++  L K
Sbjct: 704 MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAK 761



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 253/507 (49%), Gaps = 34/507 (6%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            ++ TGL P++   NI++N  CK  ++      F  +      P   ++N++I GL +  
Sbjct: 10  EMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASID 69

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA---LN-----------LFEE 191
           ++ EA   F  +   GCEP+VI + TLI+G C+ G   +    LN           L+  
Sbjct: 70  KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTS 129

Query: 192 MANGNGEIGVV--------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + +G  + G +              C P+   Y  +ID LCK G VD+A  LF +M+   
Sbjct: 130 VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSG 189

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
              D VT+ +LI  L +    +EA  L+ EM+++G +P +   + ++  LCK  K+DEA+
Sbjct: 190 CLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEAN 249

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +   +V + V  +   YN+LMDG+C +G+++   +L   M       D  +YNIL+ G+
Sbjct: 250 EIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF 309

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            +   +++AL L++ + S G KP   TY T+  GL++  ++E A   FDE      A D 
Sbjct: 310 SRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDV 363

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +YTT I GL  +  I EA ELF  L+   C  ++ AY  +IDGL K+GR++   + F  
Sbjct: 364 ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFED 423

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     VP   TY ++I GLC    +  A  +F  M +    PD IT+  LI GF + ++
Sbjct: 424 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
             +  +LL  M  K   P A     +V
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIV 510



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 162/539 (30%), Positives = 249/539 (46%), Gaps = 77/539 (14%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++NIL+A  ++    D  L      ++ G  PN  TY  +I       R+      
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F   L      +  ++ ++IKGL    RI EA  LF KLK  GC PNV+ Y  +I+GL +
Sbjct: 357 FDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 179 TGHTMIALNLFEEMANGN-----------------------------GEIGVVCKPNTVT 209
            G     L  FE+M+  +                               +   C P+T+T
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR------ 263
           Y+T+IDG  K   +D+A+ L   M  +   P  VTY S++HG C  +  NEAK       
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530

Query: 264 -------LFI----------------------EMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                  LFI                      EM  +G  P V+ +  ++D L    ++ 
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  + D M+++G  P+A TY T++  F  +G +  A E+   M   G   D  +YN L+
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGV 413
           +GY K + V++A  +Y  MV+ GIKP  VT+N L  GLF+  + + A  LF EM ++D V
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
                +YT  IDGL K G + EA   F+ +       +   Y  LI  L K+GR+  A +
Sbjct: 711 PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 770

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           L   +    + P+V  Y+ +I GL +   +D A D+F +M +   AP+ +T+ +L  GF
Sbjct: 771 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 238/512 (46%), Gaps = 35/512 (6%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P+   Y +LI+  CK+GRV   +  F R+ +S    +  TF +LI+ L    ++ 
Sbjct: 152 AAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLD 211

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  L+ ++   G EP +   ++LI  LC+ G    A  +++ +      +      + V
Sbjct: 212 EACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV------VAKKVATSRV 265

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y++++DG CK G VD    L LQM + +  PD+ TYN L+ G   AN  ++A  LF  +
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325

Query: 269 MDQGVQPSVVTFNVIM----------------DE-------------LCKNRKMDEASRL 299
              G +P+  T+  I+                DE             L  ++++DEA  L
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACEL 385

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            + +   G  PN   Y  ++DG    G+I    + F  M    C     +Y ++I+G CK
Sbjct: 386 FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCK 445

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            + + +A  ++ +MV KG  P  +TY TL  G  +  +++ A KL D M   G      T
Sbjct: 446 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT 505

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y + + G CK   I EA E+   +R   CE  +  +  L+      GR + A+++   + 
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                P+V+ Y  +I  L + G++ +AR +F  M E   APD +T+  +I  F +I    
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              E+L  M +  V PD    + ++D  VK E
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 657



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 214/423 (50%), Gaps = 17/423 (4%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA     ++   G  P+V+  N ++NGLC+      A+ LF EM +      + C+P  V
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPS------MGCEPTIV 56

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +Y+T+I GL     +D+A   F  M D    PDV+ + +LIHG C A        L  + 
Sbjct: 57  SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA 116

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + +  +P V  +  ++   CK   +D   ++L+ M+  G  P+A  Y  L+D  C +G++
Sbjct: 117 LKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A ELF  M   GC  D V++  LI     + +++EA  LYREM+ +G +P +   ++L
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +  +V+ A +++  +    VA     Y + +DG CK G + + ++L   L++++C
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL--LQMVEC 293

Query: 449 E--LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           +   DIQ YN L+ G  ++ RL  A ELF  L      PN  TY  +IQGL +  +M++A
Sbjct: 294 DNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA 353

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           +  F +      A DVI++  +I G        +  EL  K+K     P+    + V+D 
Sbjct: 354 KAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDG 407

Query: 567 LVK 569
           L+K
Sbjct: 408 LLK 410



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 248/529 (46%), Gaps = 19/529 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA+ +F+ M R         +F  L+ +L+ +   D        +   G  P L   + 
Sbjct: 176 DEAYELFERM-RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDS 234

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI   CK G+V      +  ++      +   +NSL+ G     R+ +   L  ++    
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD 294

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P++ TYN L+ G  R      AL LF+ +++        CKPN  TY+TII GL    
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDALELFKLLSSYG------CKPNAATYTTIIQGLYDAQ 348

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +++AKA F    DE +  DV++Y ++I GL  +   +EA  LF ++   G  P+VV + 
Sbjct: 349 RMEEAKAFF----DEAL--DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYT 402

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D L K  ++++  +  + M      P   TY  ++DG C    +  A ++F  M   
Sbjct: 403 AVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 462

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D ++Y  LI+G+ K  +++EA  L   M++KG +PT VTY ++  G  ++  +  A
Sbjct: 463 GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA 522

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++  +M+  G       +T+ +      G   EA ++   +    C  D+  Y  LID 
Sbjct: 523 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 582

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L  +GR+  A  +F S+      P+ +TY  +IQ     G ++ A ++   M ++   PD
Sbjct: 583 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 642

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              ++ L+ G++++    +   +  +M    + P+A   ++++  L K+
Sbjct: 643 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 691



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 180/379 (47%), Gaps = 9/379 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+  TY  LI+ F K  ++         +L     P A T+ S++ G      I EA
Sbjct: 463 GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA 522

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVT 209
             +  +++  GCEP +  + +L++     G    A  +  EM A G       C P+ + 
Sbjct: 523 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG-------CAPDVIL 575

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+++ID L   G V +A+ +F  M ++   PD +TY ++I       +   A  +   M 
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             GV P    +N +MD   K  ++D+A  + D MV  G++PNA T+N LM G    GK +
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 695

Query: 330 RAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           RA  LF  M E        VSY ILI+G  K   V EA S ++EM+ +GI P   TY +L
Sbjct: 696 RAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSL 755

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +  ++  A KL ++M + GV  D + Y+  I GL  +  +  A ++F+ +    C
Sbjct: 756 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC 815

Query: 449 ELDIQAYNCLIDGLCKSGR 467
             +   Y  L  G   +GR
Sbjct: 816 APNEVTYKVLRRGFRAAGR 834



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 177/390 (45%), Gaps = 14/390 (3%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCF 106
           +F+ M++    P  ++ +  L+   +K    D        +   G  P   TY  +++ F
Sbjct: 455 VFEQMVQKGCVPDTIT-YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK+  ++       ++      P    F SL+    ++ R  EA  + T++ A GC P+V
Sbjct: 514 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 573

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           I Y +LI+ L  TG    A ++F+ M          C P+ +TY TII    K G V+ A
Sbjct: 574 ILYTSLIDLLFSTGRVPEARHVFDSMIEKG------CAPDALTYGTIIQNFSKIGNVEAA 627

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +   M    + PD   YNSL+ G       ++A  ++  M+  G++P+ VTFNV+M  
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 687

Query: 287 LCKNRKMDEASRLLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
           L K+ K D A  L   M+++  V P   +Y  L+DG    G+++ A   F  M   G   
Sbjct: 688 LFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIP 747

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +  +Y  LI    K   + EA  L  +MV  G+ P V  Y+ L  GL +   V+ A  +F
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 807

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            EM + G A +  TY     G    G  ++
Sbjct: 808 QEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 155/310 (50%), Gaps = 23/310 (7%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAF-CIFDYMLRMHPSPPPVSSFNILLAS--LAKNK 81
           F+SLL ++      E    V+T   A  C  D +L         S  ++L ++  + + +
Sbjct: 541 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY-------TSLIDLLFSTGRVPEAR 593

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL----RSCFTPNAATFNSL 137
           H    +   G  P+  TY  +I  F KIG V     A G IL    +S   P+   +NSL
Sbjct: 594 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE----AAGEILELMAKSGVGPDCFAYNSL 649

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           + G     R+ +A  ++ ++ A G +PN +T+N L++GL + G T  A +LF+EM   + 
Sbjct: 650 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD- 708

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
           E+     P  V+Y+ +IDGL K G V +A + F +M D  I P+  TY SLI+ L  A  
Sbjct: 709 EV----PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGR 764

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EAK+L  +M+  GV P V  ++ ++  L  +  +D A  +   M++RG  PN  TY  
Sbjct: 765 IPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 824

Query: 318 LMDGFCLMGK 327
           L  GF   G+
Sbjct: 825 LRRGFRAAGR 834



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 34/260 (13%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A +    M + G   D V+ NI++NG CK +++++A+ L+ EM S G +PT+V+YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY-------IIEAVELF 440
           +  GL  I +++ A K F+ M  +G   D   +TT I G CK G        + +A++ F
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 441 RT---------------------LRILK------CELDIQAYNCLIDGLCKSGRLKFAWE 473
           R                       +IL+      C  D  AY  LID LCK GR+  A+E
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  +     + + VT+  +I+ L N G++D+A +L+ +M E    P +   D LI    
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 534 RINEPSKVNELLHKMKEKKV 553
           +  +  + NE+   +  KKV
Sbjct: 241 KAGKVDEANEIYQTVVAKKV 260


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 276/526 (52%), Gaps = 19/526 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V++FN +L +L +            ++   G+  N +T NI I   C+ GR+    +A
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA-VA 267

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               + +   P+  T+N+L++GL  +S++ EAA    ++   GC P+  TYNT+I+G C+
Sbjct: 268 LVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    A  L ++ A   G +     P+ VTY ++I+GLC EG +++A  LF + + +++
Sbjct: 328 SGMLQEATELLKD-AVFKGFV-----PDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+V YNSL+ GLC       A ++  EM+++G  P + T+N+I++ LCK   + +A+ 
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +++  + +G  P+  T+NTL+DG+C   K++ A +L   M + G   D ++YN ++NG C
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  + +E    + EM+ KG +P  +TYN L     +I+Q+E A  +   M +DG+  D  
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAV 561

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           ++ T I G C+NG +  A  LF+ L           +N LI        ++ A ++F  +
Sbjct: 562 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 621

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P++ TY I++ GLC    +D+A     +M      P + TF  +++     +  
Sbjct: 622 ISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRV 681

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
           S+   ++H M    V+P+      VVD ++  +    + P  LV+E
Sbjct: 682 SEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILVEE 721



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/467 (31%), Positives = 241/467 (51%), Gaps = 7/467 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y   I  + + GR+     AF R+      P A  +N+++  L   +   +A  ++ ++ 
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A G  P+  T+   +   C TG   +AL L   ++    E G   KP    Y T++ GL 
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLS----ERGCDAKP--AAYCTVVRGLY 187

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
             G    A+ LF +M   ++ PDV T+N+++H LC   D  E+  L  +++ +G+  +  
Sbjct: 188 AHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKF 247

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N+ +  LC++ +++EA  L++ M    V P+  TYNTLM G C   K+  A +  G M
Sbjct: 248 TCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            + GC  DD +YN +I+GYCK+  ++EA  L ++ V KG  P  VTY +L  GL     +
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E AL+LF+E Q   +  D   Y + + GLC+ G I+ A+++   +    C  DI  YN +
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+GLCK G +  A  +         +P+V T+N +I G C   ++D A  L   M     
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           APDVIT++ +++G  +  +  +VNE   +M  K   P+A   +I+++
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIE 533



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 248/500 (49%), Gaps = 48/500 (9%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++ +L    ++D       R+ A G+ P+  T+ + +  FC  GR  +   
Sbjct: 103 PPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVAL- 161

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              R+LRS                               L   GC+     Y T++ GL 
Sbjct: 162 ---RLLRS-------------------------------LSERGCDAKPAAYCTVVRGLY 187

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
             GH   A +LF+EM      +G    P+  T++ ++  LC++G V ++ AL  ++    
Sbjct: 188 AHGHGYNARHLFDEM------LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRG 241

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++ +  T N  I GLC      EA  L +E M   V P VVT+N +M  LCK+ K+ EA+
Sbjct: 242 MSANKFTCNIWIRGLCEDGRLEEAVAL-VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAA 300

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           + L  M+ +G  P+  TYNT++DG+C  G +  A EL       G   D V+Y  LING 
Sbjct: 301 QYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   ++E AL L+ E  +K +KP +V YN+L  GL     + HAL++ +EM  +G   D 
Sbjct: 361 CAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDI 420

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   I+GLCK G I +A  +     +     D+  +N LIDG CK  +L  A +L   
Sbjct: 421 WTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 480

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + P+V+TYN ++ GLC  G+  +  + F +M      P+ IT+++LI  F +IN+
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540

Query: 538 PSKVNELLHKMKEKKVMPDA 557
             + + ++ +M +  ++PDA
Sbjct: 541 LEEASGVIVRMCQDGLVPDA 560



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 249/502 (49%), Gaps = 11/502 (2%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +FP++ T+N +++  C+ G V        ++L+   + N  T N  I+GL  + R+ EA 
Sbjct: 207 VFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV 266

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           AL  ++ A+   P+V+TYNTL+ GLC+      A      M N        C P+  TY+
Sbjct: 267 ALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQG------CIPDDFTYN 319

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           TIIDG CK G + +A  L      +   PD VTY SLI+GLC   D   A  LF E   +
Sbjct: 320 TIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK 379

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            ++P +V +N ++  LC+   +  A ++++ MV+ G  P+  TYN +++G C MG I+ A
Sbjct: 380 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +       G   D  ++N LI+GYCK  +++ AL L   M + GI P V+TYN++  G
Sbjct: 440 AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL- 450
           L +  + +   + F+EM   G   +  TY   I+  CK   + EA  +   +R+ +  L 
Sbjct: 500 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI--VRMCQDGLV 557

Query: 451 -DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D  ++N LI G C++G L  A+ LF  L          T+NI+I    +   M  A  +
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M      PD+ T+ +L+ G  +     +    L +M  K  +P  +    +++LL  
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM 677

Query: 570 NEISLKSLPSFLVQERQGEVGE 591
           N    +++    +  R G V E
Sbjct: 678 NHRVSEAVAIIHIMVRMGVVPE 699



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 197/434 (45%), Gaps = 8/434 (1%)

Query: 133 TFNSLIKGLHAESRIMEA-AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            + +LI+ L +  R+ +  AAL +       +     Y   I    R G    A++ FE 
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M          C P    Y+ I+D L    + D+A  ++++M    + PD  T+   +  
Sbjct: 97  MDL------FACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKS 150

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
            C     + A RL   + ++G       +  ++  L  +     A  L D M+ R V P+
Sbjct: 151 FCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPD 210

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             T+N ++   C  G +  +  L   +   G   +  + NI I G C++  +EEA++L  
Sbjct: 211 VATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVE 270

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            M +  + P VVTYNTL  GL +  +V+ A +    M   G   D  TY T IDG CK+G
Sbjct: 271 RMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSG 329

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EA EL +         D   Y  LI+GLC  G ++ A ELF       L P++V YN
Sbjct: 330 MLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYN 389

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +++GLC  G +  A  +  +M E    PD+ T++++I+G  ++   S    +++    K
Sbjct: 390 SLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVK 449

Query: 552 KVMPDASIVSIVVD 565
             +PD    + ++D
Sbjct: 450 GYLPDVFTFNTLID 463



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 168/371 (45%), Gaps = 4/371 (1%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT--YNSLIHGLCHANDWNEAKRLFI 266
            Y  +I  L   G +D   A     +  ++ PD +   Y + I     A     A   F 
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASAR-SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M      P+   +N IMD L      D+A ++   M+  GV P+A T+   +  FCL G
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + + A  L  S+   GC     +Y  ++ G   +     A  L+ EM+ + + P V T+N
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +   L +   V  +  L  ++ + G++A+  T   +I GLC++G + EAV L   +   
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  YN L+ GLCK  +++ A +    + +   +P+  TYN +I G C  G + +A
Sbjct: 276 VAP-DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEA 334

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +L  D       PD +T+  LI+G     +  +  EL ++ + K + PD  + + +V  
Sbjct: 335 TELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394

Query: 567 LVKNEISLKSL 577
           L +  + L +L
Sbjct: 395 LCRQGLILHAL 405


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 231/424 (54%), Gaps = 9/424 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G  P++ TYN+LI+ +CK G +     A   + R   +P+  T+N++++ L    +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIG---SALQLLDRMSVSPDVVTYNTILRTLCDSGK 227

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  +  +     C P+VITY  LI   C+      A+ L +EM +        CKP+
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKG------CKPD 281

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ +I+G+CKEG +D+A      M      P+V+T+N ++  +C    W +A++   
Sbjct: 282 VVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLA 341

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +G  PSVVTFN++++ LC+   +  A  +L+ M Q G  PN+ +YN L+   C   
Sbjct: 342 EMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK 401

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K+ RA E    M S GC  D V+YN L+   CK+ +V+ A+ +  ++ SKG  P ++TYN
Sbjct: 402 KMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYN 461

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL ++ + + A+KL DEM+  G+  D  TY+T + GL + G + EA+  F  L  +
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEM 521

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + +   YN ++ GLCK+ +   A +    +      P   +Y I+I+GL  +G   +A
Sbjct: 522 GVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEA 581

Query: 507 RDLF 510
            +L 
Sbjct: 582 LELL 585



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 242/476 (50%), Gaps = 9/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++     LI   CK G+          +  S   P+  T+N LI G      I  A
Sbjct: 140 GDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSA 199

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++      P+V+TYNT++  LC +G    A+ + +       ++   C P+ +TY
Sbjct: 200 LQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDR------QMQRECYPDVITY 250

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+  CKE  V +A  L  +M+D+   PDVVTYN LI+G+C     +EA R    M  
Sbjct: 251 TILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS 310

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G QP+V+T N+I+  +C   +  +A + L  M+++G  P+  T+N L++  C  G I R
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGR 370

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++   M   GC  + +SYN L++  CK+K++E A+     MVS+G  P +VTYNTL  
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +V+ A+++ +++   G +    TY T IDGL K G   +A++L   ++    + 
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y+ L+ GL + G++  A   F  L    + PN +TYN ++ GLC   Q  +A D  
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             M      P   ++ +LI G        +  ELL+++  + V+  +S   +VV +
Sbjct: 551 AYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKI 606



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 231/449 (51%), Gaps = 9/449 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+     SLI+GL    +  +A  +   L+  G  P+VITYN LI+G C+TG    AL L
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            + M+           P+ VTY+TI+  LC  G + +A  +  +       PDV+TY  L
Sbjct: 203 LDRMS---------VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTIL 253

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I   C  +   +A +L  EM D+G +P VVT+NV+++ +CK  ++DEA R L+ M   G 
Sbjct: 254 IEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGC 313

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
           +PN  T+N ++   C  G+   AE+    M   GC    V++NILIN  C+   +  A+ 
Sbjct: 314 QPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAID 373

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +  +M   G  P  ++YN L   L +  ++E A++  D M   G   D  TY T +  LC
Sbjct: 374 VLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALC 433

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+G +  AVE+   L    C   +  YN +IDGL K G+   A +L   +    L P+++
Sbjct: 434 KDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDII 493

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY+ ++ GL  +G++D+A   F D+EE    P+ IT++ ++ G  +  +  +  + L  M
Sbjct: 494 TYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYM 553

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             +   P  +   I+++ L    ++ ++L
Sbjct: 554 VARGCKPTETSYMILIEGLAYEGLAKEAL 582



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 219/418 (52%), Gaps = 11/418 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL---NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           P V ++N+L++   K     + L   +   + P++ TYN ++   C  G++        R
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 122 IL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + R C+ P+  T+  LI+    ES + +A  L  +++  GC+P+V+TYN LING+C+ G
Sbjct: 238 QMQRECY-PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A+     M +        C+PN +T++ I+  +C  G    A+    +M  +  +P
Sbjct: 297 RLDEAIRFLNHMPSYG------CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            VVT+N LI+ LC       A  +  +M   G  P+ +++N ++  LCK++KM+ A   L
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D+MV RG  P+  TYNTL+   C  GK++ A E+   + S GC    ++YN +I+G  K 
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            + ++A+ L  EM  KG+KP ++TY+TL  GL    +V+ A+  F +++  GV  +  TY
Sbjct: 471 GKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITY 530

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            + + GLCK    + A++    +    C+    +Y  LI+GL   G  K A EL   L
Sbjct: 531 NSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 156/289 (53%), Gaps = 5/289 (1%)

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L +N +++E  + L+ MV RG  P+     +L+ G C  GK  +A  +   +E  G 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D ++YN+LI+GYCK  E+  AL L   M    + P VVTYNT+   L +  +++ A++
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 404 LFD-EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           + D +MQR+    D  TYT  I+  CK   + +A++L   +R   C+ D+  YN LI+G+
Sbjct: 234 VLDRQMQRE-CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK GRL  A      +P     PNV+T+NI+++ +C+ G+   A     +M     +P V
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +TF++LI+   R     +  ++L KM +    P++   + ++  L K++
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK 401



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 162/328 (49%), Gaps = 3/328 (0%)

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V  N+ +  L    +  E  +   +M+ +G  P ++    ++  LCK  K  +A+R++++
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           +   G  P+  TYN L+ G+C  G+I  A +L   ++ M    D V+YN ++   C + +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGK 227

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           ++EA+ +    + +   P V+TY  L     +   V  A+KL DEM+  G   D  TY  
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I+G+CK G + EA+     +    C+ ++  +N ++  +C +GR   A +    +    
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             P+VVT+NI+I  LC  G + +A D+   M ++   P+ ++++ L+H   +  +  +  
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           E L  M  +   PD    + ++  L K+
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKD 435



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 3/219 (1%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           ++V  N  +    +N E+EE      +MV +G  P ++   +L  GL +  +   A ++ 
Sbjct: 109 EEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVM 168

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           + ++  G   D  TY   I G CK G I  A++L   + +     D+  YN ++  LC S
Sbjct: 169 EILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDS 225

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G+LK A E+          P+V+TY I+I+  C +  + +A  L  +M +    PDV+T+
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++LI+G  +     +    L+ M      P+    +I++
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIIL 324



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N ++  L+K    D        +   GL P++ TY+ L+    + G+V      
Sbjct: 455 PVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAF 514

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      PNA T+NS++ GL    + + A      + A GC+P   +Y  LI GL  
Sbjct: 515 FHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAY 574

Query: 179 TGHTMIALNLFEEMAN 194
            G    AL L  E+ +
Sbjct: 575 EGLAKEALELLNELCS 590


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 165/528 (31%), Positives = 262/528 (49%), Gaps = 13/528 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNIL 102
           +   +FD M++   SP  V + N +L  L      +K       +   G+ P + TYN L
Sbjct: 182 QCLSVFDKMIKSRLSPD-VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ +CK G+V  G      + R    PN  T+N LI GL  +    +A  L  ++   G 
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + +  TYN LI G    G    AL+L EEM            P   TY++ I GLCK G 
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS------PTVATYNSFIYGLCKLGR 354

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +  A      M   N+ PDVV+YN+LI+G C   +  +A  LF E+    + P++VT+N 
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LC+  +++ A +L   M+  G+ P+  TY  L++G C MG ++ A+E F  M   G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D  +Y   I G  K  +   A SL  EM++KG  P ++ YN +  GL ++  +E A 
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M  DGV  D  TYT+ I    +NG + +  E+F  +        +  Y  LI G 
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
              GRL+ A+  F  +    ++PNV+TYN +I GLC   +MD+A + F +M E    P+ 
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK 654

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            ++ +LI+    +    +   L  +M ++ V PD+   S ++  L K+
Sbjct: 655 YSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 244/470 (51%), Gaps = 6/470 (1%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++LI  + K   V      F ++++S  +P+    N +++ L  +  + +A  ++  +  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           FG +P ++TYNTL++  C+ G     L+L  EM          C PN VTY+ +I+GL K
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDVTYNVLINGLSK 281

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G  ++AK L  +M    +     TYN LI+G  +     EA  L  EM+ +G  P+V T
Sbjct: 282 KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVAT 341

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N  +  LCK  +M +A + L  M+   + P+  +YNTL+ G+C +G + +A  LF  + 
Sbjct: 342 YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           S+      V+YN L++G C+  E+E A  L  EM+++GI P +VTY  L  G  ++  + 
Sbjct: 402 SIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 461

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A + FDEM  +G+  D+  Y T I G  K G    A  L   +       D+  YN ++
Sbjct: 462 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 521

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DGLCK G L+ A EL   +    ++P+ VTY  +I     +G++ K R++F +M      
Sbjct: 522 DGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           P V+T+ +LIHG        +      +M+EK ++P+    + +++ L K
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 225/451 (49%), Gaps = 47/451 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N+L+  L+K   ++        +  TGL  + YTYN LI  +   G ++     
Sbjct: 267 PNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL 326

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++    +P  AT+NS I GL    R+ +A    + + A    P+V++YNTLI G CR
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+ M A  LF+E+ +      +   P  VTY+T++DGLC++G ++ A+ L ++M +E I
Sbjct: 387 LGNLMKAFLLFDELRS------IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ------------------------ 274
            PD+VTY  L++G C     + A+  F EM+ +G++                        
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500

Query: 275 -----------PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                      P ++ +NV++D LCK   ++EAS LL  MV  GV P+  TY +++    
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHL 560

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G++ +  E+F  M S G     V+Y +LI+G+     +E A   + EM  KGI P V+
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN+L  GL ++ +++ A   F EM   G+  +  +YT  I+  C  G   EA+ L++ +
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
                + D   ++ L+  L K  +L+   +L
Sbjct: 681 LDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 162/327 (49%), Gaps = 39/327 (11%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNIL 102
           +AF +FD +  ++  P  V+ +N LL  L +       +     +   G+ P++ TY IL
Sbjct: 392 KAFLLFDELRSIYLFPTIVT-YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N  CK+G +S+    F  +L      ++  + + I G         A +L  ++ A G 
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMA--------------------NGNGEIG-- 200
            P++I YN +++GLC+ G+   A  L ++M                     NG    G  
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 201 ----VVCK---PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
               ++ K   P+ VTY+ +I G   +G +++A   F +M+++ I P+V+TYNSLI+GLC
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                ++A   F EM+++G+ P+  ++ ++++E C      EA  L   M+ RGV+P++C
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSC 690

Query: 314 TYNTLMDGF---CLMGKINRAEELFGS 337
           T++ L+      C +  + + E L  S
Sbjct: 691 THSALLKQLGKDCKLQAVRQLESLLDS 717



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 3/218 (1%)

Query: 342 GCKHDDVSYNIL---INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           GC   +VS  IL   I  Y K   VE+ LS++ +M+   + P V   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A++++  M   G+     TY T +D  CK G + + ++L   ++   C  +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+GL K G  + A  L   +    L  +  TYN +I G  N G + +A  L  +M    A
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +P V T++  I+G  ++   S   + L  M    ++PD
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 165/574 (28%), Positives = 266/574 (46%), Gaps = 110/574 (19%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  TYN++I+  C+ G V   F     ++    +P+A T+ +L+ GL   SR+ EA AL 
Sbjct: 277 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALL 336

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++   G +PN++ Y TL++G  + G T  A ++ +EM      I    +PN + Y  +I
Sbjct: 337 DEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEM------ISAGVQPNKIMYDNLI 390

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLCK G + +A  L  +M    + PD  TYN L+ G    +D + A  L  EM + G+ 
Sbjct: 391 RGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL 450

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA-------------------CT- 314
           P+V ++ ++++ LC+N +  EA  LL+ M+  G++PNA                   C  
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEA 510

Query: 315 ---------------YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
                          YN+L+ G   +G++  AEE +  ++  G   D+ +Y+ LI+GYCK
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 570

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH------------------- 400
              +E+A  L R+M++ G+KP   TY  L  G F+ +  E                    
Sbjct: 571 TGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHI 630

Query: 401 ----------------ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
                           A  +  E++++G+  D   Y++ I GLCK   + +AV L   + 
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               E  I  YN LIDG C+SG +  A  +F S+    LVPN VTY  +I G C +G + 
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750

Query: 505 KARDLFLDMEENAAAPD----------------------------------VITFDMLIH 530
            A DL+ +M +   APD                                  V  F+ L+H
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVH 810

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           GF +  +  +  +LLH M +++++P+A  V  VV
Sbjct: 811 GFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 161/527 (30%), Positives = 252/527 (47%), Gaps = 21/527 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
           +A  +   M+  HP PP      ++LAS+ +    DT   +    P+    ++L++ + K
Sbjct: 133 QANGLLHQMILAHPHPP------LVLASIQRAIQ-DTDHRSRSPSPSTAVLDVLVDTYKK 185

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF----GCEP 164
            G V         +      P     N L+K L       +A  L  KLK F    G  P
Sbjct: 186 TGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR----ADAMELLWKLKGFMEGAGILP 241

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V TY+T I   C+      A  +FEEM   +      C  N VTY+ +I GLC+ G V+
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD------CAMNEVTYNVMISGLCRSGAVE 295

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A     +M D  ++PD  TY +L++GLC  +   EAK L  EM   G++P++V +  ++
Sbjct: 296 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLV 355

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D   K  K  EA  +L  M+  GV+PN   Y+ L+ G C +G++ RA +L   M  +G +
Sbjct: 356 DGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLR 415

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D  +YN L+ G+ +  + + A  L  EM + GI P V +Y  +  GL +  + + A  L
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            +EM  +G+  +   Y   I G  K G I  A E    +       D+  YN LI GL  
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST 535

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            GR++ A E +  +    LVP+  TY+ +I G C  G ++KA  L   M  +   P+  T
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +  L+ G+ + N+  KV+ +L  M      PD  I  IV+  L ++E
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 245/503 (48%), Gaps = 12/503 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S N  L  L+K    D   +        G+ P ++TYNI+I   CK G +      
Sbjct: 95  PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++ +   TP+  T+N+LI G      + E+  LF ++K  GCEP+VITYN LIN  C+
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               + A   F EM + +       KPN ++YST+ID LCKEG +  A   F+ M    +
Sbjct: 215 FKGMLRAFEFFREMKDKD------LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGL 268

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  TY+SLI   C A +  EA  L  EM+ + V  ++VT+  ++D LC+   M+EA  
Sbjct: 269 LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEE 328

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M + GV PN   Y  L+ G   +  +++A ELF  M     K D + +  ++ G C
Sbjct: 329 LFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC 388

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++EE   +  EM   GI    V Y TL    F+      A+ L +EM+  G      
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+   IDGLCK G + EA+  F  +     + ++  Y  LIDGLCK+  +  A +LF  +
Sbjct: 449 TFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM 508

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               ++P+ + Y  MI G    G   +A ++   M E     D+  +  L+ G  +  + 
Sbjct: 509 QDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQV 568

Query: 539 SKVNELLHKMKEKKVMPDASIVS 561
            +  + L +M  K ++PD ++ +
Sbjct: 569 QQARKFLAEMIGKGIIPDETLCT 591



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 149/471 (31%), Positives = 248/471 (52%), Gaps = 6/471 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+    + P   + N  ++   K G   L    F  ++ +   P   T+N +I  +  E 
Sbjct: 87  RMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEG 146

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            ++ A +LF ++K  G  P+++TYNTLI+G  + G    ++ LFEEM        + C+P
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF------MGCEP 200

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + +TY+ +I+  CK   + +A   F +MKD+++ P+V++Y++LI  LC       A + F
Sbjct: 201 DVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFF 260

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           ++M   G+ P+  T++ ++D  CK   + EA  L D M+Q  V  N  TY TL+DG C  
Sbjct: 261 VDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEE 320

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G +N AEELF +M   G   +  +Y  LI+G+ K + +++A+ L+ EM  K IKP ++ +
Sbjct: 321 GMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLW 380

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            T+  GL    ++E    +  EM+  G+ A+   YTT +D   K G   EA+ L   +R 
Sbjct: 381 GTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRD 440

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           L  E+ +  +  LIDGLCK G ++ A   F  +P   L PNV  Y  +I GLC +  +  
Sbjct: 441 LGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGD 500

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A+ LF +M++    PD I +  +I G ++     +   + +KM E  +  D
Sbjct: 501 AKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELD 551



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 246/505 (48%), Gaps = 26/505 (5%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+       A  +F+ M +M  +P  V+ +N L+    K    D        +   G
Sbjct: 144 KEGDMLT-----ARSLFEQMKKMGLTPDIVT-YNTLIDGYGKIGLLDESVCLFEEMKFMG 197

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
             P++ TYN LIN FCK   +   F  F  +      PN  ++++LI  L  E  +  A 
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
             F  +   G  PN  TY++LI+  C+ G+   A  L +EM   + ++      N VTY+
Sbjct: 258 KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDL------NIVTYT 311

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++DGLC+EG +++A+ LF  M    + P++  Y +LIHG       ++A  LF EM ++
Sbjct: 312 TLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREK 371

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            ++P ++ +  I+  LC   K++E   ++  M + G+  N   Y TLMD +   G    A
Sbjct: 372 DIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEA 431

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M  +G +   V++  LI+G CK   V+EA+  +  M    ++P V  Y  L  G
Sbjct: 432 INLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDG 491

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L + + +  A KLFDEMQ   +  D   YT  IDG  K+G   EA+ +   +  +  ELD
Sbjct: 492 LCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELD 551

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + AY  L+ GL + G+++ A +    +    ++P+      +++     G +D+A +L  
Sbjct: 552 LYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQN 611

Query: 512 DMEE--------NAAAPDVITFDML 528
           ++ E        N A P++ T D L
Sbjct: 612 ELVEKGLIHGNSNPAVPNIQTRDDL 636



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 198/368 (53%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC P    +  +   L + G ++ A   FL+M    + P   + N+ +H L  A + + +
Sbjct: 57  VCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           +  F +M+  G+ P+V T+N+++  +CK   M  A  L + M + G+ P+  TYNTL+DG
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G ++ +  LF  M+ MGC+ D ++YN LIN +CK K +  A   +REM  K +KP 
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V++Y+TL   L +   ++ A+K F +M R G+  +  TY++ ID  CK G + EA  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     +L+I  Y  L+DGLC+ G +  A ELF ++    + PN+  Y  +I G     
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            MDKA +LF +M E    PD++ +  ++ G    ++  +   ++ +MKE  +  +  I +
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416

Query: 562 IVVDLLVK 569
            ++D   K
Sbjct: 417 TLMDAYFK 424



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 36/355 (10%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P    F+ +   L +   ++ A +    M +  V P A + N  +      G+ + + + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   G      +YNI+I   CK  ++  A SL+ +M   G+ P +VTYNTL  G  +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           I  ++ ++ LF+EM+  G   D  TY   I+  CK   ++ A E FR ++    + ++ +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVP----------------------------- 485
           Y+ LID LCK G ++ A + F  +    L+P                             
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 486 ------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                 N+VTY  ++ GLC +G M++A +LF  M +    P++  +  LIHG I++    
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           K  EL ++M+EK + PD  +   +V  L  +E  L+     + + ++  +G + V
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLC-SESKLEECKIIMTEMKESGIGANPV 413


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 261/502 (51%), Gaps = 15/502 (2%)

Query: 63  SP-PPVSSFNILLASLA-KNKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLG 115
           SP P +SS N+LL SL    +H D R     L A G  P+ + +N ++      G + + 
Sbjct: 117 SPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVA 176

Query: 116 FIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                R+ RS     P+A ++N +I GL    +  +A  +F ++   G  PN ITYNT+I
Sbjct: 177 LAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMI 236

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +G  + G       L ++M +         KPN VTY+ ++ GLC+ G +D+ + L  +M
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGP------KPNIVTYNVLLSGLCRAGRMDETRVLMDEM 290

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
              ++ PD  TY+ L  GL    +      LF E + +GV     T +++++ LCK+ K+
Sbjct: 291 ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A ++L+++V  G+ P    YNTL++G+C +  +  A  +F  M+S   + D ++YN L
Sbjct: 351 AKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING CK + V +A  L  EM   G+ P+V T+NTL        Q+E    +  +MQ+ G+
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
            +D  ++ + +   CKNG I EAV +   +       + Q YN +ID   +SG  + A+ 
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 530

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   + +  +  ++VTYN++++GLC   Q+D+A +L   +      PDV++++ +I    
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 534 RINEPSKVNELLHKMKEKKVMP 555
              +  K  ELL +M +  + P
Sbjct: 591 NKGDTDKALELLQEMNKYGIRP 612



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 261/525 (49%), Gaps = 20/525 (3%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVS-SFNILLASLAKN-------KHYDTRLNATG 91
           GD++V     A  +   M R   +PPP + S+N+++A L ++       K +D  ++  G
Sbjct: 171 GDLDV-----ALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD-MG 224

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN  TYN +I+   K G +  GF    ++L     PN  T+N L+ GL    R+ E  
Sbjct: 225 VVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETR 284

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L  ++ +    P+  TY+ L +GL RTG +   L+LF E       +G        T S
Sbjct: 285 VLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY------TCS 338

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +++GLCK+G V KA+ +   +    + P  V YN+LI+G C   D   A  +F +M  +
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            ++P  +T+N +++ LCK   + +A  L+  M + GV P+  T+NTL+D +   G++ + 
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +   M+  G K D +S+  ++  +CKN ++ EA+++  +M+ K + P    YN++   
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             E    E A  L ++M+  GV+A   TY   + GLC++  I EA EL  TLR      D
Sbjct: 519 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + +YN +I   C  G    A EL   +    + P + TY+ ++  L + G++     L+ 
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQ 638

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            M      P    + +++  ++R    SKV  L  +M EK +  D
Sbjct: 639 QMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 148/305 (48%), Gaps = 13/305 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           AFCIF+ M   H  P  ++ +N L+  L K     K  D    +  +G+ P++ T+N LI
Sbjct: 388 AFCIFEQMKSRHIRPDHIT-YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +   G++   F     + +     +  +F S++K      +I EA A+   +      
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN   YN++I+    +G T  A  L E+M N     GV    + VTY+ ++ GLC+   +
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS----GV--SASIVTYNLLLKGLCRSSQI 560

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A+ L   ++++ + PDVV+YN++I   C+  D ++A  L  EM   G++P++ T++ +
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 620

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L    ++ +   L   M+ + V P++  Y  ++D +      ++   L   M   G 
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680

Query: 344 KHDDV 348
             DD 
Sbjct: 681 AFDDT 685



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 152/316 (48%), Gaps = 4/316 (1%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           PS+ + N++++ L    +  +      L+V  G RP+   +N ++      G ++ A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 335 FGSM-ESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
              M  S G    D  SYN++I G  ++ +  +AL ++ EMV  G+ P  +TYNT+  G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +   +E   +L D+M  DG   +  TY   + GLC+ G + E   L   +       D 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 453 QAYNCLIDGLCKSGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             Y+ L DGL ++G  +    LF  SL  GV++    T +I++ GLC DG++ KA  +  
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVML-GAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +      P  + ++ LI+G+ ++ +      +  +MK + + PD    + +++ L K E
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 572 ISLKSLPSFLVQERQG 587
           +  K+    +  E+ G
Sbjct: 419 MVTKAEDLVMEMEKSG 434


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/528 (31%), Positives = 262/528 (49%), Gaps = 13/528 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNIL 102
           +   +FD M++   SP  V + N +L  L      +K       +   G+ P + TYN L
Sbjct: 182 QCLSVFDKMIKSRLSPD-VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ +CK G+V  G      + R    PN  T+N LI GL  +    +A  L  ++   G 
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + +  TYN LI G    G    AL+L EEM            P   TY++ I GLCK G 
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG------ASPTVATYNSFIYGLCKLGR 354

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +  A      M   N+ PDVV+YN+LI+G C   +  +A  LF E+    + P++VT+N 
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LC+  +++ A +L   M+  G+ P+  TY  L++G C MG ++ A+E F  M   G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D  +Y   I G  K  +   A SL  EM++KG  P ++ YN +  GL ++  +E A 
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  +M  DGV  D  TYT+ I    +NG + +  E+F  +        +  Y  LI G 
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
              GRL+ A+  F  +    ++PNV+TYN +I GLC   +MD+A + F +M E    P+ 
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNK 654

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            ++ +LI+    +    +   L  +M ++ V PD+   S ++  L K+
Sbjct: 655 YSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 244/470 (51%), Gaps = 6/470 (1%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++LI  + K   V      F ++++S  +P+    N +++ L  +  + +A  ++  +  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           FG +P ++TYNTL++  C+ G     L+L  EM          C PN VTY+ +I+GL K
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDVTYNVLINGLSK 281

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G  ++AK L  +M    +     TYN LI+G  +     EA  L  EM+ +G  P+V T
Sbjct: 282 KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVAT 341

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N  +  LCK  +M +A + L  M+   + P+  +YNTL+ G+C +G + +A  LF  + 
Sbjct: 342 YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           S+      V+YN L++G C+  E+E A  L  EM+++GI P +VTY  L  G  ++  + 
Sbjct: 402 SIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 461

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A + FDEM  +G+  D+  Y T I G  K G    A  L   +       D+  YN ++
Sbjct: 462 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 521

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DGLCK G L+ A EL   +    ++P+ VTY  +I     +G++ K R++F +M      
Sbjct: 522 DGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           P V+T+ +LIHG        +      +M+EK ++P+    + +++ L K
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 223/446 (50%), Gaps = 47/446 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N+L+  L+K   ++        +  TGL  + YTYN LI  +   G ++     
Sbjct: 267 PNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL 326

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++    +P  AT+NS I GL    R+ +A    + + A    P+V++YNTLI G CR
Sbjct: 327 QEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCR 386

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+ M A  LF+E+ +      +   P  VTY+T++DGLC++G ++ A+ L ++M +E I
Sbjct: 387 LGNLMKAFLLFDELRS------IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ------------------------ 274
            PD+VTY  L++G C     + A+  F EM+ +G++                        
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500

Query: 275 -----------PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                      P ++ +NV++D LCK   ++EAS LL  MV  GV P+  TY +++    
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHL 560

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G++ +  E+F  M S G     V+Y +LI+G+     +E A   + EM  KGI P V+
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN+L  GL ++ +++ A   F EM   G+  +  +YT  I+  C  G   EA+ L++ +
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLK 469
                + D   ++ L+  L K  +L+
Sbjct: 681 LDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 3/218 (1%)

Query: 342 GCKHDDVSYNIL---INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           GC   +VS  IL   I  Y K   VE+ LS++ +M+   + P V   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A++++  M   G+     TY T +D  CK G + + ++L   ++   C  +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I+GL K G  + A  L   +    L  +  TYN +I G  N G + +A  L  +M    A
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +P V T++  I+G  ++   S   + L  M    ++PD
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/442 (35%), Positives = 240/442 (54%), Gaps = 14/442 (3%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++L+  F +  ++  GF AF R     F  +  + N L+ GL  ES   +   ++ ++  
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
              E NVI++N ++NGLC+ G    A ++ E+M       GV   PN +TY+T+IDG CK
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMK----VWGV--SPNVITYNTLIDGYCK 202

Query: 220 EGFVD---KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
            G +    KA A+  +M  + I P+ VTYN LI G C   + + A R+F EM  QG++P+
Sbjct: 203 MGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPN 262

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VVT+N++++ LC + K+DEA  L D MV   + PN  T+N L++GFC    +N A  LF 
Sbjct: 263 VVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFN 322

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            ME  G   + ++Y  LI+ YCK+  +E+A +LY  M+ +GI P V TYN L  GL    
Sbjct: 323 DMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKG 382

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            V+ A  L +EM    ++AD  TY   ID LCK G   +AV+L   +           YN
Sbjct: 383 DVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYN 442

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+DG C+ G L+ A  +   +       NVVT+N++I+G C  G+++ A  L  +M E 
Sbjct: 443 TLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLER 502

Query: 517 AAAPDVITF-----DMLIHGFI 533
              P+  T+     +M+  GF+
Sbjct: 503 GLVPNRTTYEIIKEEMMEKGFV 524



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 233/440 (52%), Gaps = 9/440 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  N+   + L+       +I+     F +   +G + ++I+ N L++GL +        
Sbjct: 81  FCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            ++ EM     E+      N ++++ +++GLCK G +++A  +   MK   ++P+V+TYN
Sbjct: 141 FVYREMIKRKIEL------NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYN 194

Query: 247 SLIHGLC---HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +LI G C         +A  +  EM+ +G+ P+ VT+N+++D  CK+  +  A R+   M
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM 254

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            ++G+RPN  TYN L++G C  GK++ A  L   M S   + + V++N+LING+CKNK V
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTV 314

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            EA++L+ +M  +G+ P  +TY TL     +  ++E A  L++ M   G+  +  TY   
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL 374

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I GLC+ G +  A  L   +   K   D+  YN LID LCK G  + A +L   +    L
Sbjct: 375 IAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGL 434

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P+ VTYN ++ G C +G +  A  +   ME      +V+T ++LI GF         N 
Sbjct: 435 NPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANG 494

Query: 544 LLHKMKEKKVMPDASIVSIV 563
           LL++M E+ ++P+ +   I+
Sbjct: 495 LLNEMLERGLVPNRTTYEII 514



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 190/345 (55%), Gaps = 9/345 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI---MEAA 151
           N+ ++NI++N  CK+G+++        +     +PN  T+N+LI G     RI    +A 
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           A+  ++ A G  PN +TYN LI+G C+  +   A+ +F EM           +PN VTY+
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQG------LRPNVVTYN 267

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I+GLC +G VD+A AL  QM   ++ P+VVT+N LI+G C     NEA  LF +M  Q
Sbjct: 268 ILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ 327

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           GV P+ +T+  ++D  CK+ +M++A  L ++M+ RG+ P   TYN L+ G C  G +  A
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M S     D V+YNILI+  CK  E  +A+ L  EM  KG+ P+ VTYNTL  G
Sbjct: 388 RSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
                 +  AL +   M+R G  A+  T+   I G C  G + +A
Sbjct: 448 YCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 197/376 (52%), Gaps = 15/376 (3%)

Query: 67  VSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA-- 118
           V SFNI++  L K    N+  D    +   G+ PN+ TYN LI+ +CK+GR+   + A  
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADA 214

Query: 119 -FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               ++     PN  T+N LI G   +  +  A  +F +++  G  PNV+TYN LINGLC
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
             G    A+ L ++M + + E      PN VT++ +I+G CK   V++A  LF  M+ + 
Sbjct: 275 SDGKVDEAVALRDQMVSSDLE------PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P+ +TY +LI   C      +A  L+  M+D+G+ P V T+N ++  LC+   +  A 
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L++ MV + +  +  TYN L+D  C  G+  +A +L   M   G     V+YN L++GY
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+   +  AL +   M  KG +  VVT+N L  G     ++E A  L +EM   G+  + 
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNR 508

Query: 418 RTYTTFIDGLCKNGYI 433
            TY    + + + G++
Sbjct: 509 TTYEIIKEEMMEKGFV 524



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 169/311 (54%), Gaps = 3/311 (0%)

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D G + S+++ N ++  L K  +  +   +   M++R +  N  ++N +++G C +GK+N
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE---ALSLYREMVSKGIKPTVVTYN 386
           RA ++   M+  G   + ++YN LI+GYCK   + +   A ++ +EMV+KGI P  VTYN
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYN 232

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G  +   V  A+++F EMQR G+  +  TY   I+GLC +G + EAV L   +   
Sbjct: 233 ILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS 292

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             E ++  +N LI+G CK+  +  A  LF  +    + PN +TY  +I   C DG+M+ A
Sbjct: 293 DLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L+  M +    P+V T++ LI G  R  +      L+++M  KK+  D    +I++D 
Sbjct: 353 FALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDS 412

Query: 567 LVKNEISLKSL 577
           L K   S K++
Sbjct: 413 LCKKGESRKAV 423



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 119/240 (49%), Gaps = 3/240 (1%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           ++L+  + +N ++      ++     G K ++++ N L  GL +  +      ++ EM +
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
             +  +  ++   ++GLCK G +  A ++   +++     ++  YN LIDG CK GR+  
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGK 208

Query: 471 AWELFCSLPHGV---LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
            ++    L   V   + PN VTYNI+I G C D  +  A  +F +M+     P+V+T+++
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LI+G     +  +   L  +M    + P+    +++++   KN+   +++  F   E+QG
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 259/494 (52%), Gaps = 12/494 (2%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           + NI++ +  K   +D      + +    +FP++ T+N++++   + G           +
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +     P   T+NS++KGL       +A  +F ++  FG  P+V ++  LI G CR G  
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL +++EM +         KP+ V++S +I    + G +D A A   +M+   + PD 
Sbjct: 278 EEALKIYKEMRHRG------IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 331

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V Y  +I G C A   ++A R+  EM+  G  P VVT+N +++ LCK R++ +A  LL+ 
Sbjct: 332 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +RGV P+ CT+ TL+ G+C+ GK+++A +LF +M +   + D V+YN LI+G C+  +
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +++A  L+ +M S+ I P  VTY+ L     E  QVE A    DEM   G+  +  TY +
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G C++G + +  +  + + + K   D+  YN LI G  K  ++  A++L   +    
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+VVTYN++I G    G + +A  +F  M      PD  T+  +I+G +      +  
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631

Query: 543 ELLHKMKEKKVMPD 556
           +L  +M ++   PD
Sbjct: 632 QLHDEMLQRGFAPD 645



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 242/458 (52%), Gaps = 6/458 (1%)

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G   L   A+  +  S    N  T N ++          +  A+ ++++     P+V+
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T+N +++   R G    A+ L + M +         KP  VTY++++ GLC+ G  DKA 
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKG------LKPGIVTYNSVLKGLCRSGMWDKAW 246

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F +M D  + PDV ++  LI G C   +  EA +++ EM  +G++P +V+F+ ++   
Sbjct: 247 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 306

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            +  KMD A   L  M   G+ P+   Y  ++ GFC  G ++ A  +   M   GC  D 
Sbjct: 307 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 366

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+YN L+NG CK + + +A  L  EM  +G+ P + T+ TL  G     +++ AL+LFD 
Sbjct: 367 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 426

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M    +  D  TY T IDG+C+ G + +A +L+  +   +   +   Y+ LID  C+ G+
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 486

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A+     + +  ++PN++TYN +I+G C  G + K +     M  N  +PD+IT++ 
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           LIHG+I+ ++     +LL+ M+++KV PD    +++++
Sbjct: 547 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 584



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 224/423 (52%), Gaps = 8/423 (1%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-PNTV 208
           AA  +  + +   E N  T N +++  C+      AL  F+++     E+   C  P+ V
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCK------ALE-FDKVDAVISEMEKRCVFPDVV 192

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T++ ++D   + G  + A AL   M  + + P +VTYNS++ GLC +  W++A  +F EM
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            D GV P V +F +++   C+  +++EA ++   M  RG++P+  +++ L+  F   GK+
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A      M   G   D V Y ++I G+C+   + +AL +  EMV  G  P VVTYNTL
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +  ++  A  L +EM+  GV  D  T+TT I G C  G + +A++LF T+   + 
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             DI  YN LIDG+C+ G L  A +L+  +    + PN VTY+I+I   C  GQ++ A  
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
              +M      P+++T++ +I G+ R    SK  + L KM   KV PD    + ++   +
Sbjct: 493 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 552

Query: 569 KNE 571
           K +
Sbjct: 553 KED 555



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 197/376 (52%), Gaps = 13/376 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EA  I+  M R     P + SF+ L+   A+    D        +   GL P+   Y ++
Sbjct: 279 EALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  FC+ G +S        ++     P+  T+N+L+ GL  E R+++A  L  +++  G 
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P++ T+ TLI+G C  G    AL LF+ M N         +P+ VTY+T+IDG+C++G 
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDIVTYNTLIDGMCRQGD 451

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +DKA  L+  M    I P+ VTY+ LI   C      +A     EM+++G+ P+++T+N 
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I+   C++  + +  + L  M+   V P+  TYNTL+ G+    K++ A +L   ME   
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D V+YN+LING+  +  V+EA  ++ +M +KGI+P   TY ++  G       + A 
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631

Query: 403 KLFDEMQRDGVAADTR 418
           +L DEM + G A D +
Sbjct: 632 QLHDEMLQRGFAPDDK 647



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 72/367 (19%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           QP V  F++++    ++RK  EA     L++   V   A   N L+      G  + A +
Sbjct: 85  QPRV--FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKE------------------------------- 362
            +  + S   + +  + NI+++ YCK  E                               
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202

Query: 363 ----VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                E A++L   MVSKG+KP +VTYN++  GL      + A ++F EM   GVA D R
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA------W 472
           ++T  I G C+ G I EA+++++ +R    + D+ +++CLI    + G++  A       
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 473 ELFCSLPHGVL-----------------------------VPNVVTYNIMIQGLCNDGQM 503
             F  +P GV+                             +P+VVTYN ++ GLC + ++
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             A  L  +M E    PD+ TF  LIHG+    +  K  +L   M  +++ PD    + +
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442

Query: 564 VDLLVKN 570
           +D + + 
Sbjct: 443 IDGMCRQ 449


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/467 (33%), Positives = 243/467 (52%), Gaps = 6/467 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P + TYN +++ FCK G V        ++     +PN  T+N L+ GL     + +A
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   G E +V TY+ LI G C  G    A  L EEM +     G V  P  VTY
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSR----GAV--PTVVTY 310

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TI+ GLCK G V  A+ L   M ++N+ PD+V+YN+LI+G     +  EA  LF E+  
Sbjct: 311 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRY 370

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + PSVVT+N ++D LC+   +D A RL D M++ G  P+  T+ T + GFC MG +  
Sbjct: 371 RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM 430

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+ELF  M + G + D  +Y   I G  K  +  +A  +  EM+++G  P ++TYN    
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL ++  ++ A +L  +M  +G+  D  TYT+ I      G++ +A  LF  +       
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            +  Y  LI      GRLK A   F  +    + PNV+TYN +I GLC   +MD+A + F
Sbjct: 551 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFF 610

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +M+    +P+  T+ +LI+    +    +   L   M ++++ PD+
Sbjct: 611 AEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 657



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 242/477 (50%), Gaps = 41/477 (8%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P+      L+  ++ +  ++E   L F K+ + G  P+V   N ++  L    +    ++
Sbjct: 128 PSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNN---ID 184

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +  E+ N   E G+   P  VTY+T++D  CK+G V +A  L  QM+    +P+ VTYN 
Sbjct: 185 VAREVYNVMVECGIC--PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNV 242

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L++GL H+ +  +AK L  +M+  G++ SV T++ ++   C+  +++EASRL + M+ RG
Sbjct: 243 LVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRG 302

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P   TYNT+M G C  G+++ A +L   M +     D VSYN LI GY +   + EA 
Sbjct: 303 AVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 362

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+ E+  + + P+VVTYNTL  GL  +  ++ A++L DEM + G   D  T+TTF+ G 
Sbjct: 363 LLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGF 422

Query: 428 CKNGYIIEAVELFRTL--------------RI--------------LKCEL-------DI 452
           CK G +  A ELF  +              RI              ++ E+       D+
Sbjct: 423 CKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 482

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN  IDGL K G LK A EL   + +  LVP+ VTY  +I      G + KAR LFL+
Sbjct: 483 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLE 542

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M      P V+T+ +LIH +              +M EK V P+    + +++ L K
Sbjct: 543 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCK 599



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 234/488 (47%), Gaps = 15/488 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N +L S  K            ++ A G  PN  TYN+L+N     G +      
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +LR     +  T++ LI+G   + +I EA+ L  ++ + G  P V+TYNT++ GLC+
Sbjct: 260 IQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCK 319

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L + M N N        P+ V+Y+T+I G  + G + +A  LF +++  ++
Sbjct: 320 WGRVSDARKLLDVMVNKN------LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P VVTYN+LI GLC   D + A RL  EM+  G  P V TF   +   CK   +  A  
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L D M+ RG++P+   Y T + G   +G  ++A  +   M + G   D ++YN+ I+G  
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++EA  L ++M+  G+ P  VTY ++         +  A  LF EM   G+     
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I      G +  A+  F  +       ++  YN LI+GLCK  ++  A+  F  +
Sbjct: 554 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM 613

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + PN  TY I+I   CN G   +A  L+ DM +    PD  T   L+     +N+ 
Sbjct: 614 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK---HLNKD 670

Query: 539 SKVNELLH 546
            K++ + H
Sbjct: 671 YKLHVVRH 678



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 221/437 (50%), Gaps = 6/437 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   T+N+++     +  + EA  L  +++A GC PN +TYN L+NGL  +G    A  L
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            ++M     E+ V       TY  +I G C++G +++A  L  +M      P VVTYN++
Sbjct: 260 IQDMLRLGLEVSVY------TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           ++GLC     ++A++L   M+++ + P +V++N ++    +   + EA  L   +  R +
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  TYNTL+DG C +G ++ A  L   M   G   D  ++   + G+CK   +  A  
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L+ EM+++G++P    Y T  +G  ++     A  + +EM   G   D  TY  FIDGL 
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G + EA EL + +       D   Y  +I     +G L+ A  LF  +    + P+VV
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY ++I      G++  A   F +M E    P+VIT++ LI+G  ++ +  +      +M
Sbjct: 554 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM 613

Query: 549 KEKKVMPDASIVSIVVD 565
           + K + P+    +I+++
Sbjct: 614 QAKGISPNKYTYTILIN 630



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/419 (32%), Positives = 213/419 (50%), Gaps = 10/419 (2%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN---GNGEIGVVCKPNTVTYST--IID 215
           G + + I+Y+ +++ L R G    A  + E++ +    NG I VV        S   I+D
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILD 135

Query: 216 GL----CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC-HANDWNEAKRLFIEMMD 270
            L     K+  ++K   +F +M  + + PDV   N ++  L    N+ + A+ ++  M++
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVE 195

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+VVT+N ++D  CK   + EA +LL  M   G  PN  TYN L++G    G++ +
Sbjct: 196 CGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQ 255

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+EL   M  +G +    +Y+ LI GYC+  ++EEA  L  EM+S+G  PTVVTYNT+  
Sbjct: 256 AKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMY 315

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +V  A KL D M    +  D  +Y T I G  + G I EA  LF  LR      
Sbjct: 316 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAP 375

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            +  YN LIDGLC+ G L  A  L   +      P+V T+   ++G C  G +  A++LF
Sbjct: 376 SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +M      PD   +   I G +++ +PSK   +  +M  +   PD    ++ +D L K
Sbjct: 436 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 494



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 6/160 (3%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           H +   +   +++   L K +     + + G+FP++ TY +LI+ +   GR+ L  + F 
Sbjct: 517 HVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 576

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      PN  T+N+LI GL    ++ +A   F +++A G  PN  TY  LIN  C  G
Sbjct: 577 EMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLG 636

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           H   AL L+++M +         +P++ T+ +++  L K+
Sbjct: 637 HWQEALRLYKDMLDRE------IQPDSCTHRSLLKHLNKD 670


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 266/542 (49%), Gaps = 49/542 (9%)

Query: 71  NILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           N L+A+L ++++++       ++  T  F N  + + L+ CF ++ +          +L+
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
             F  N   +N L+KGL       +A +L  +++     P+V++YNT+I G C       
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL L  EM  G+G     C  + VT+  +ID  CK G +D+A  L  +MK + +  D++ 
Sbjct: 196 ALQLANEM-QGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV 249

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y SLI G C   + +  K LF E++++G  P  +T+N ++   CK  ++ EAS + + M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMM 309

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RGVRPN  TY  L+DG C +GK   A +L   M     + + V+YNI+IN  CK+  V 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVA 369

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTT 422
           +AL +   M  +  +P  +TYN+L  GL     ++ A KL   M +D      D  ++  
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429

Query: 423 FIDGLC-----------------------------------KNGYIIEAVELFRTLRILK 447
            I GLC                                   K+G + +A+EL++ +   K
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   Y  +IDG CK+G L  A  L C +    L P+V  YN ++  LC  G +D+A 
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF +M+ + + PDVI+F+++I G ++  +      LL  M    + PD    S +++  
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609

Query: 568 VK 569
           +K
Sbjct: 610 LK 611



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 156/507 (30%), Positives = 254/507 (50%), Gaps = 16/507 (3%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++NILL  L +N  +         +    L P++ +YN +I  FC+   +        
Sbjct: 142 VYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLAN 201

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +  S  + +  T+  LI       ++ EA  L  ++K  G E ++I Y +LI G C  G
Sbjct: 202 EMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261

Query: 181 HTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                  LF+E +  G+        P  +TY+T+I G CK G + +A  +F  M +  + 
Sbjct: 262 ELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+V TY  LI GLC      EA +L   M+ +  +P+VVT+N+I+++LCK+  + +A  +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM--ESMGCKHDDVSYNILINGY 357
           ++LM +R  RP+  TYN+L+ G C  G ++ A +L   M  +S     D +S+N LI+G 
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   + +AL +Y  +V K     +VT N L     +   V  A++L+ ++    +  ++
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYTT IDG CK G +  A  L   +R+ +    +  YNCL+  LCK G L  AW LF  
Sbjct: 495 DTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEE 554

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      P+V+++NIMI G    G +  A  L + M     +PD+ T+  LI+ F+++  
Sbjct: 555 MQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGY 614

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
             +      KM +    PDA I   V+
Sbjct: 615 LDEAISFFDKMIDSGFEPDAHICDSVL 641



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 231/507 (45%), Gaps = 49/507 (9%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++ IL+ +  K    D        +   GL  +L  Y  LI  FC  G +  G   F  +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L    +P A T+N+LI+G     R+ EA+ +F  +   G  PNV TY  LI+GLC  G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL L   M   + E      PN VTY+ II+ LCK+  V  A  +   MK     PD 
Sbjct: 334 KEALQLLNLMLQKDEE------PNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +TYNSL+ GLC   D +EA +L   M+       P V++FN ++  LCK  ++ +A  + 
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DL+V++    +  T N L++     G +N+A EL+  + +     +  +Y  +I+G+CK 
Sbjct: 448 DLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKT 507

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +  A  L  +M    + P+V  YN L   L +   ++ A +LF+EMQRD    D  ++
Sbjct: 508 GMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              ID                                   G  K+G +K A  L   + H
Sbjct: 568 NIMID-----------------------------------GSLKAGDIKSAESLLVGMSH 592

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P++ TY+ +I      G +D+A   F  M ++   PD    D ++   I   E  K
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDK 652

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
           + E + K+ +K V+ D  +   V+D +
Sbjct: 653 LTEFVKKLVDKDVVLDKELTCTVMDYM 679



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 156/317 (49%), Gaps = 1/317 (0%)

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  +F + +D G   S    N +M  L ++R  + A      M++     N  + + L++
Sbjct: 57  AVSVFQQAVDSGGSLSFAG-NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            F  M K   A  +   M   G   +  +YNIL+ G C+N E  +A+SL REM    + P
Sbjct: 116 CFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMP 175

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VV+YNT+  G  E  ++E AL+L +EMQ  G +    T+   ID  CK G + EA+ L 
Sbjct: 176 DVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLL 235

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
           + ++    E D+  Y  LI G C  G L     LF  +      P  +TYN +I+G C  
Sbjct: 236 KEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++ +A ++F  M E    P+V T+  LI G   + +  +  +LL+ M +K   P+    
Sbjct: 296 GRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTY 355

Query: 561 SIVVDLLVKNEISLKSL 577
           +I+++ L K+ +   +L
Sbjct: 356 NIIINKLCKDSLVADAL 372


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 273/572 (47%), Gaps = 67/572 (11%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----------LNATGLFPNLYTYNILIN 104
           ++   H   P V S+N +L +L +    + R           +   G+ PN+YTYN++I 
Sbjct: 156 HLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIR 215

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
                G +  G     ++ +   +PN  T+N+LI     + ++ EA AL   +   G   
Sbjct: 216 GVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA 275

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           N+I+YN++INGLC  G       L EEM  G G +     P+ VTY+T+++G CKEG + 
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEM-RGKGLV-----PDEVTYNTLVNGFCKEGNLH 329

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +   L  +M  + ++P+VVTY +LI+ +C A + + A  +F +M  +G++P+  T+  ++
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D  C+   M+EA ++L  M+  G  P+  TYN L+ G+C +G++  A  +   M   G  
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D VSY+ +I G+C+ +E+ +A  +  EMV KG+ P  VTY++L  GL    ++  A  L
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F EM R G+  D  TYT+ I+  C +G + +A+ L   +       D   Y+ LI+GL K
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569

Query: 465 SGRLKFAWELFC------SLPHGVLV---------------------------------- 484
             R K A  L        S+P  V                                    
Sbjct: 570 KARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRV 629

Query: 485 ----------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
                     PN   YN+MI G    G + KA +L++++E ++ A   +    L+    R
Sbjct: 630 FKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAR 689

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
                +++ LL  +     + DA +  ++V++
Sbjct: 690 EGMNDELSRLLQNILRSCRLNDAKVAKVLVEV 721



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 247/491 (50%), Gaps = 50/491 (10%)

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFI-------AFGRILRSCFTPNAATFNSLIKG 140
           N  G  P + +YN +++   +  R S            F  ++R+  +PN  T+N +I+G
Sbjct: 159 NRHGFAPTVLSYNAVLDALLR--RSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRG 216

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           + ++  + +      K++  G  PNV+TYNTLI+  C+      A+ L   MA G    G
Sbjct: 217 VVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG----G 272

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           V    N ++Y+++I+GLC +G + +   L  +M+ + + PD VTYN+L++G C   + ++
Sbjct: 273 VAA--NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQ 330

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
              L  EM+ +G+ P+VVT+  +++ +CK   +  A  + D M  RG+RPN  TY TL+D
Sbjct: 331 GLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLID 390

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GFC  G +N A ++   M   G     V+YN L++GYC    V+EA+ + R MV +G+ P
Sbjct: 391 GFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPP 450

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VV+Y+T+  G     ++  A ++ +EM   GV  DT TY++                  
Sbjct: 451 DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS------------------ 492

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
                            LI GLC   +L  A++LF  +    L P+ VTY  +I   C D
Sbjct: 493 -----------------LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVD 535

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++ KA  L  +M +    PD +T+ +LI+G  +         LL K+  ++ +PD    
Sbjct: 536 GELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTY 595

Query: 561 SIVVDLLVKNE 571
           + +++    NE
Sbjct: 596 NTLIENCSNNE 606



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 214/411 (52%), Gaps = 12/411 (2%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF-----V 223
           ++ ++  L R G    AL L   +AN +G       P  ++Y+ ++D L +         
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLH-LANRHG-----FAPTVLSYNAVLDALLRRSSSNHRDY 188

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A+ +F  M    ++P+V TYN +I G+    D  +      +M  +G+ P+VVT+N +
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D  CK +K+ EA  LL  M   GV  N  +YN++++G C  G+++   EL   M   G 
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D+V+YN L+NG+CK   + + L L  EMV KG+ P VVTY TL   + +   +  A++
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FD+M+  G+  + RTYTT IDG C+ G + EA ++   + +      +  YN L+ G C
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             GR++ A  +   +    L P+VV+Y+ +I G C + ++ KA  +  +M E    PD +
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDLLVKNEIS 573
           T+  LI G     +  +  +L  +M  + + PD  +  S++    V  E+S
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELS 539



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 198/387 (51%), Gaps = 5/387 (1%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN-----DWNE 260
           ++  +  ++  L + GFV KA  L          P V++YN+++  L   +     D+++
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A+R+F +M+  GV P+V T+NVI+  +     +++    +  M + G+ PN  TYNTL+D
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
             C   K+  A  L  +M   G   + +SYN +ING C    + E   L  EM  KG+ P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             VTYNTL  G  +   +   L L  EM   G++ +  TYTT I+ +CK G +  AVE+F
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +R+     + + Y  LIDG C+ G +  A+++   +      P+VVTYN ++ G C  
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++ +A  +   M E    PDV+++  +I GF R  E  K  ++  +M EK V+PD    
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490

Query: 561 SIVVDLLVKNEISLKSLPSFLVQERQG 587
           S ++  L   +  +++   F    R+G
Sbjct: 491 SSLIQGLCLQQKLVEAFDLFREMMRRG 517



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 225/475 (47%), Gaps = 26/475 (5%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   GL P+  TYN L+N FCK G +  G +    ++    +PN  T+ +LI  +     
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A  +F +++  G  PN  TY TLI+G C+ G    A  +  EM      I     P+
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEM------IVSGFSPS 416

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ ++ G C  G V +A  +   M +  + PDVV+Y+++I G C   +  +A ++  
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKE 476

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+++GV P  VT++ ++  LC  +K+ EA  L   M++RG+ P+  TY +L++ +C+ G
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           ++++A  L   M   G   D+V+Y++LING  K    + A  L  ++  +   P  VTYN
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYN 596

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL                      +    + ++    + G C  G + EA  +F+T+   
Sbjct: 597 TLI--------------------ENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQR 636

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + +   YN +I G  + G +  A+ L+  L H     + V    +++ L  +G  D+ 
Sbjct: 637 NHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDEL 696

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
             L  ++  +    D     +L+    +      V  +L +M +  ++PD  I S
Sbjct: 697 SRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 241/479 (50%), Gaps = 14/479 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P    +N++I   C+ GR+      + R +     P+  T+  L+ GL    R+ +A  +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++ +    P+  T   ++  LC       A  L EEM +           N +TYS +
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG------MAANAITYSAL 115

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +DGLCK   +D+A AL   M +    P VVTYNS+I G C A   +EA     +M+ +G 
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P ++T+  ++   CK+R +     LL  + +RG  P+  TY+T++DG C  G++  A +
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +F   E M C    ++YN LI GYC+  +++EA+ L  +MV     P VVTY TL     
Sbjct: 236 IF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           ++ +++ A +LF +M  + ++ D  T+T+ +DGLC  G + +A+EL   +    C   I 
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YNC++DG CK+ +++ A EL         VPN VTYNI++ G C  G+ D+A   +LD 
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ-YLDQ 411

Query: 514 EENAAAP---DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +   P    V  + +++    R        +   +M ++  +P A+  + VV  L K
Sbjct: 412 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 470



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 231/494 (46%), Gaps = 17/494 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++  L+  L+K +     +       +    P+  T  +++   C   RV     
Sbjct: 36  PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 95

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +L      NA T+++L+ GL    R+ EA AL   +   GC P V+TYN++I G C
Sbjct: 96  LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFC 155

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R      A    E+M      +   C P+ +TY+ +I G CK   V +   L  ++    
Sbjct: 156 RARRVDEAHGFMEQM------VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+VTY+++I GLC A    +A  +F EM      P+ +T+N ++   C+   MDEA 
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAI 266

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           RLL  MV     P+  TY TLM  FC MG+++ A ELF  M +     D V++  L++G 
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    +E+AL L  E+  +G  PT+ TYN +  G  + +QV  A +L  + +  G   +T
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNT 386

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRIL--KCELDIQAYNCLIDGLCKSGRLKFAWELF 475
            TY   + G C+ G   +A++    L      C   +  Y  ++D LC+ GR   A + +
Sbjct: 387 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY 446

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +     VP   T+  ++  LC   Q  +A +L  +M +    P   T D ++  + R 
Sbjct: 447 EEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRA 506

Query: 536 NEPSKVNELLHKMK 549
               K +EL  +++
Sbjct: 507 GMIQKADELASELR 520



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 196/389 (50%), Gaps = 17/389 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++    + +  D       ++ A G  P++ TY  LI  FCK   V  G   
Sbjct: 142 PTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLEL 201

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G + R  FTP+  T++++I GL    R+ +A  +F ++    C P  ITYN+LI G CR
Sbjct: 202 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCR 258

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ L  +M +        C P+ VTY+T++   CK G +D A  LF QM    +
Sbjct: 259 AGDMDEAIRLLGKMVDDK------CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PDVVT+ SL+ GLC      +A  L  E+  +G  P++ T+N ++D  CK  ++ +A  
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE 372

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNILING 356
           L+     RG  PN  TYN L+ G C  G+ ++A +    + S G  C      Y I+++ 
Sbjct: 373 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 432

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C++   ++A+  Y EM+ +G  P   T+ T+   L + HQ + A +L +EM + G    
Sbjct: 433 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 492

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             T    +   C+ G I +A EL   LR+
Sbjct: 493 PGTCDAVVSAYCRAGMIQKADELASELRL 521



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 184/393 (46%), Gaps = 66/393 (16%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-----------------------QGVQ 274
           +NP  + +N +I GLC A     A  ++ +M D                         VQ
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 275 -----------PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                      P   T  V++  LC   ++D+A  L++ M+ RG+  NA TY+ L+DG C
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              +++ A  L  +M   GC    V+YN +I G+C+ + V+EA     +MV++G  P ++
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF--- 440
           TY  L  G  +   V   L+L  E+ R G   D  TY+T IDGLCK G + +AV++F   
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 441 -----------------------RTLRIL------KCELDIQAYNCLIDGLCKSGRLKFA 471
                                    +R+L      KC  D+  Y  L+   CK GRL  A
Sbjct: 241 SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA 300

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           +ELF  +    L P+VVT+  ++ GLC +G+M+ A +L  ++      P + T++ ++ G
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           + + N+  K  EL+   + +  +P+    +I+V
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILV 393



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           +N +I GLC++GRL+ A  ++  + +    P+ +TY  ++ GL    ++  A  +  +M 
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
                PD  T  +++      +      EL+ +M  + +  +A   S +VD L K E
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 123


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 263/551 (47%), Gaps = 48/551 (8%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHY------DTRLNATGL- 92
           P EAF  F  +L  H  P P S+ N LLA L++        + Y      D+ +NA  L 
Sbjct: 103 PREAFEAFRLLLD-HRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLN 161

Query: 93  ---------------------------FPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
                                      FP++ T+N+LI+   + G V         +   
Sbjct: 162 IMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANR 221

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
              P   T+NS++KGL    R  +A  +F  +      P+V ++N LI G CR G    A
Sbjct: 222 GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEA 281

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           +  ++EM +          P+ V++S +I    + G +D A A   +MK   + PD V Y
Sbjct: 282 VKFYKEMQH------RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIY 335

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             +I G C A   +EA R+  EM+  G  P VVT+N +++ LCK  ++ +A +LL+ M +
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEE 395

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RGV P+ CT+ TL+ G+C  G    A +LF ++     + D V+YN LI+G C+  ++ +
Sbjct: 396 RGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A  L+ +M ++ I P  +TY+ L     E  QVE A    DEM + G   + RTY + I 
Sbjct: 456 ANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIK 515

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           G C++G + +  +  + +R      D+  +N LI G  K   +  A+ +F  +   ++ P
Sbjct: 516 GYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRP 575

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           + VTYN++I G    G M  A  +F  M ++   PD  T+  LI+G +      +  +L 
Sbjct: 576 DAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLH 635

Query: 546 HKMKEKKVMPD 556
            +M  +   PD
Sbjct: 636 DEMIHRGFAPD 646



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 251/509 (49%), Gaps = 6/509 (1%)

Query: 78  AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
           A  +   + L A+   P    +++LI  + +  +    F AF  +L       A+  N+L
Sbjct: 69  ASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNAL 128

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           +  L        A   +  + +   E N  T N +++  C+T     A  +  EM     
Sbjct: 129 LAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK--- 185

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                  P+ VT++ +ID   + G VD A AL   M +  + P +VTYNS++ GLC    
Sbjct: 186 ---RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRR 242

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           +++AK +F  M    V P V +FN+++   C+  ++ EA +    M  R V P+  +++ 
Sbjct: 243 FDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSC 302

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+  F   G+++ A      M+ +G   D V Y ++I G+C+   + EAL +  EMV  G
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG 362

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P VVTYNTL  GL + H++  A KL +EM+  GV  D  T+TT I G C+ G    A+
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENAL 422

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           +LF TL   +   D+  YN LIDG+C+ G L  A EL+  +    ++PN +TY+I+I   
Sbjct: 423 QLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSH 482

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  GQ++ A     +M +    P++ T++ +I G+ R     K  + L KM++  V PD 
Sbjct: 483 CEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDL 542

Query: 558 SIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
              + ++   +K E    +   F + E++
Sbjct: 543 ITFNTLIHGYIKEENMHGAFNVFNIMEKE 571



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 184/360 (51%), Gaps = 12/360 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V SF+ L+   ++    D        +   GL P+   Y ++I  FC+ G +S     
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     P+  T+N+L+ GL  + R+++A  L  +++  G  P++ T+ TLI+G CR
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   AL LF+ +           +P+ VTY+++IDG+C++G + KA  L+  M    I
Sbjct: 415 QGNFENALQLFDTLLRQR------LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ +TY+ LI   C      +A     EM+ +G  P++ T+N I+   C++  + +  +
Sbjct: 469 LPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQ 528

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L  M Q  V P+  T+NTL+ G+     ++ A  +F  ME    + D V+YN++ING+ 
Sbjct: 529 FLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFS 588

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   +++A  +++ M   GI+P   TY +L  G       + A +L DEM   G A D +
Sbjct: 589 EQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 261/528 (49%), Gaps = 59/528 (11%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +RL ++   PN++   +LI  F ++G V      + ++      P     N ++ GL  +
Sbjct: 117 SRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKK 171

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            R      ++  + A G  PNV+TY TLI+G CR G  + A  LF+EM      I     
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM------IEKKIF 225

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  V Y+ +I GLC E  + +A+++F  M++  + P++ TYN+++ G C      +A  L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           + EM+  G+ P+VVTF +++D LCK  +M  A + L  M   GV PN   YN L+DG+C 
Sbjct: 286 YXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 325 MGK--------------------------------INRAEELFGSMESM---GCKHDDVS 349
            G                                 ++R EE  G ++ M   G   + V+
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN LI+GYCK   +E+A+ +  +M  KGI+P ++T++TL  G  +  ++E A+ L+ EM 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G+  D   YT  IDG  K+G   EA  L + ++      ++   +CLIDGLCK GR+ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 470 FAWELFCS-------------LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            A +LF +             L   +  PN V Y  +IQGLC DG++ KA   F DM  +
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              PDV T  ++I G  R      V  L   + +  ++P++S+  ++ 
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 255/556 (45%), Gaps = 74/556 (13%)

Query: 6   CCNRSFSFASAPISAFRSN-FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           CC+     +    S F  N F  L++ F ++   E         EA  ++  M  +    
Sbjct: 109 CCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVE---------EALWVYYKMDVL---- 155

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + + N++L  L K   +DT         A G  PN+ TY  LI+  C+ G     F  
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++     P    +  LI+GL  ESRI EA ++F  ++  G  PN+ TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             H   AL L+ EM  G+G +     PN VT+  +IDGLCK   +  A+   + M    +
Sbjct: 276 IAHVKKALELYXEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++  YN LI G C A + +EA  L  E+    + P V T+++++  LC   +M+EA  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M ++G  PNA TYNTL+DG+C  G + +A E+   M   G + + ++++ LI+GYC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-------- 410
           K  ++E A+ LY EMV KG+ P VV Y  L  G F+    + A +L  EMQ         
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 411 ------DGVAADTRT----------------------------------YTTFIDGLCKN 430
                 DG+  D R                                   YT  I GLC +
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I +A + F  +R      D+     +I G  ++  L+    L   +    ++PN   Y
Sbjct: 570 GRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629

Query: 491 NIMIQGLCNDGQMDKA 506
            ++ +G    G +  A
Sbjct: 630 RVLAKGYEESGYLKSA 645



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 220/436 (50%), Gaps = 14/436 (3%)

Query: 102 LINCFCKIGRVSLG---FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           LI C  K  R  +    F    R+  S FTPN   F  LI        + EA  ++ K+ 
Sbjct: 96  LIQCLQKSRRSRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMD 153

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
                P +   N +++GL + G       ++ +M      +     PN VTY T+IDG C
Sbjct: 154 VL---PAMQACNMVLDGLVKKGRFDTMWKVYGDM------VARGASPNVVTYGTLIDGCC 204

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           ++G   KA  LF +M ++ I P VV Y  LI GLC  +  +EA+ +F  M + G+ P++ 
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLY 264

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N +MD  CK   + +A  L   M+  G+ PN  T+  L+DG C   ++  A +    M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S G   +   YN LI+GYCK   + EALSL+ E+    I P V TY+ L  GL  + ++
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E A  L  EM++ G   +  TY T IDG CK G + +A+E+   +     E +I  ++ L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDG CK+G+++ A  L+  +    L+P+VV Y  +I G   DG   +A  L  +M+E   
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 519 APDVITFDMLIHGFIR 534
            P+V T   LI G  +
Sbjct: 505 HPNVFTLSCLIDGLCK 520



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 213/424 (50%), Gaps = 11/424 (2%)

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY-----------STIIDGLCK 219
           ++ N L R   +    N+F  +     E+G+V +   V Y           + ++DGL K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G  D    ++  M     +P+VVTY +LI G C   D+ +A RLF EM+++ + P+VV 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + +++  LC   ++ EA  +   M   G+ PN  TYNT+MDG+C +  + +A EL+  M 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G   + V++ ILI+G CK  E+  A     +M S G+ P +  YN L  G  +   + 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL L  E+++  +  D  TY+  I GLC    + EA  L + ++      +   YN LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DG CK G ++ A E+   +    + PN++T++ +I G C  G+M+ A  L+ +M      
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PDV+ +  LI G  +     +   L  +M+E  + P+   +S ++D L K+     ++  
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 580 FLVQ 583
           FL +
Sbjct: 531 FLAK 534



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 262/607 (43%), Gaps = 95/607 (15%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVS 68
           +  F ++   + D+  R    NV+T               +AF +FD M+     P  V 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT-VV 229

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            + IL+  L               +  +G+ PNLYTYN +++ +CKI  V      +  +
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L     PN  TF  LI GL     ++ A      + +FG  PN+  YN LI+G C+ G+ 
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 183 MIALNLFEE-------------------------MANGNGEIGVVCK----PNTVTYSTI 213
             AL+L  E                         M   +G +  + K    PN VTY+T+
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDG CKEG ++KA  +  QM ++ I P+++T+++LI G C A     A  L+ EM+ +G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VV +  ++D   K+    EA RL   M + G+ PN  T + L+DG C  G+I+ A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 334 LF---------GS----MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           LF         GS    ++   C  + V Y  LI G C +  + +A   + +M   G++P
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV--- 437
            V T   +  G F    +   + L  ++ + G+  ++  Y     G  ++GY+  A+   
Sbjct: 590 DVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFC 649

Query: 438 -ELFRTLRILKCE------LDIQAYNCLI--DGLCKSGRL-KFAWELFCSLP--HGVL-- 483
            E  + L  +  E      +  +   C++     C S  L  F    F  L   H +L  
Sbjct: 650 GEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKP 709

Query: 484 -VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT-------------FDM-- 527
             P+ +   +   G   D + +KA  LF  M+ +   PD++T              DM  
Sbjct: 710 PSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGE 769

Query: 528 LIHGFIR 534
            IH +IR
Sbjct: 770 WIHAYIR 776



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 95/457 (20%), Positives = 166/457 (36%), Gaps = 56/457 (12%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN   Y  LI   C  GR+      F  +  S   P+  T   +I+G      + +   L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN----------GNGEIGVVC 203
              +   G  PN   Y  L  G   +G+   AL+   E             G+  I    
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRF 673

Query: 204 KPNTVT-----YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
           +   VT     +S+ +       FV      +     +  +P  +       G       
Sbjct: 674 QLCVVTEKKECHSSYLTAFGIHSFV---LLWYFHTILKPPSPHEILKKVPFIGQKGDQRP 730

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           N+A +LF +M     QP +VT  V +        +D    +   +  RG+  + C  N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++ +   G+I  A  LF   +    K D  ++  +I G+  + + EEAL L+ EM     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMK---- 842

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
                          E ++     K   E +   V  +  T+   +      G + E  +
Sbjct: 843 ---------------ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQ 887

Query: 439 LFRTLR-ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            FR+++        I  + C++D LC++G L  A+E    +P   + PN V +  ++   
Sbjct: 888 HFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGAC 944

Query: 498 CNDGQMD-----------KARDLFLDMEENAAAPDVI 523
              G  +           +AR   L++E +    +VI
Sbjct: 945 SLQGDSNGNGNSNIKIXSEARRQLLELEPSHVGDNVI 981


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 254/484 (52%), Gaps = 5/484 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R  A  + P++ T+ ILI+C C  G ++LGF A G+I+++    +A  F  L++ L A+ 
Sbjct: 3   RAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKK 62

Query: 146 RIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           R  +A  +   ++   GC P+V +Y+TL+ GLC       A  L   MA    E G  C 
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMA----EDGDNCP 118

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V+YST+I G  KEG V KA  LF +M D  I P+VVT NS+I GLC     ++A+ +
Sbjct: 119 PDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 178

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M+D+ + P+  T+N ++     + +  EA R+L  M + G RPN  TYN L+D  C 
Sbjct: 179 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCK 238

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G    A E+F SM   G K D  +Y  L++GY     + E  ++   MV  G++    T
Sbjct: 239 SGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHT 298

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           ++       +  +++ A   F +MQ+ G   D  TYTT IDGLCK G + +A+  F  + 
Sbjct: 299 FSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMI 358

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 +I  +  LI G    G+ + A ELF  +    + P+V  +  MI  L  +G++ 
Sbjct: 359 DDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVT 418

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A+ LF  M    A P+V++++ +IHG+    E  +V +LL  M    + P A   + ++
Sbjct: 419 EAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 478

Query: 565 DLLV 568
           D +V
Sbjct: 479 DGMV 482



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 228/479 (47%), Gaps = 33/479 (6%)

Query: 57  MLRMHPS---PPPVSSFNILLASLAKNKHYDTRLNATGLF--------PNLYTYNILINC 105
           +LR  P     P V S++ LL  L   K  +       +         P++ +Y+ +I+ 
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           F K G V   +  F ++L     PN  T NS+I GL     + +A A+  ++      PN
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
             TYN+LI+G   +G    A+ + +EM+  +G+     +PN VTY+ +ID LCK GF  +
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSR-DGQ-----RPNVVTYNMLIDCLCKSGFHAE 244

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A+ +F  M      PD  TY SL+HG     +  E   +   M+  G++ +  TF++ + 
Sbjct: 245 AREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIY 304

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             CK  ++DEAS     M Q G  P+  TY T++DG C +G+++ A   F  M   G   
Sbjct: 305 AYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSP 364

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           + +++  LI+G+    + E+A  L+ EM+ +GI P V  +  +   LF+  +V  A KLF
Sbjct: 365 NIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLF 424

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D M R G   +  +Y T I G    G + E ++L   + ++  +     +N L+DG+   
Sbjct: 425 DLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM 484

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           G                L P+V T   +I   C DG+++    LF +M   A   D IT
Sbjct: 485 G----------------LKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 527



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 200/409 (48%), Gaps = 72/409 (17%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD+      +A+ +F  ML  H  PP V + N ++  L K +  D       ++    
Sbjct: 133 KEGDVG-----KAYTLFCKMLD-HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI-----KGLHAESR 146
           + PN  TYN LI+ +   G+ +        + R    PN  T+N LI      G HAE+R
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG--------- 197
                 +F  +   G +P+  TY +L++G    G+ ++ +N  +++   NG         
Sbjct: 247 -----EIFNSMIQSGPKPDATTYGSLLHGYATEGN-LVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 198 -EIGVVCK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            EI   CK                    P+ VTY+T+IDGLCK G +D A + F QM D+
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            ++P+++T+ +LIHG      W +A+ LF EMMD+G+ P V  F  ++D L K  K+ EA
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            +L DLM + G +PN  +YNT++ G+ + G++    +L   M  +G K   V++N L++G
Sbjct: 421 QKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 480

Query: 357 Y-------------------CKNKEVEEALSLYREMVSKGIKPTVVTYN 386
                               C++  +E+ L+L+REM+ K  K   +T N
Sbjct: 481 MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 199/421 (47%), Gaps = 38/421 (9%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+  T+  +I   C  G ++   A   Q+    +  D V +  L+  LC     ++A  +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 265 FIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDG 321
            +  M + G  P V +++ ++  LC  +K +EA+ L+ +M + G    P+  +Y+T++ G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F   G + +A  LF  M   G   + V+ N +I+G CK + +++A ++ ++M+ + I P 
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TYN+L  G     Q   A+++  EM RDG   +  TY   ID LCK+G+  EA E+F 
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 442 TLRILKCELDIQAYNCLIDGL-----------------------------------CKSG 466
           ++     + D   Y  L+ G                                    CK G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           RL  A   F  +     +P++VTY  +I GLC  G++D A   F  M ++  +P++ITF 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
            LIHGF    +  K  EL ++M ++ + PD +I + ++D L K     ++   F +  R 
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430

Query: 587 G 587
           G
Sbjct: 431 G 431



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 27/309 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLA-----SLAKNKHYDTRLNATGLFPNLYTYNILI 103
           EA  IF+ M++  P P   +  ++L       +L +  +    +   G+  N +T++I I
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEI 303

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             +CK GR+    + F ++ +  F P+  T+ ++I GL    R+ +A + F ++   G  
Sbjct: 304 YAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLS 363

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN+IT+ TLI+G    G    A  LF EM +          P+   ++ +ID L KEG V
Sbjct: 364 PNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG------IPPDVTIFTAMIDRLFKEGKV 417

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+ LF  M      P+VV+YN++IHG   A +  E  +L  +M+  G++P+ VTFN  
Sbjct: 418 TEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT- 476

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
                          LLD MV  G++P+  T  TL+D  C  G+I     LF  M     
Sbjct: 477 ---------------LLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKAD 521

Query: 344 KHDDVSYNI 352
           K D ++ NI
Sbjct: 522 KTDTITENI 530


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 260/494 (52%), Gaps = 16/494 (3%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           + NI++ +  K   +D      + +    +FP++ T+N++++   + G           +
Sbjct: 97  TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +     P   T+NS++KGL       +A  +F ++  FG  P+V ++  LI G CR G  
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL +++EM +         KP+ V++S +I    + G +D A A   +M+   + PD 
Sbjct: 217 EEALKIYKEMRHRG------IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDG 270

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V Y  +I G C A   ++A R+  EM+  G  P VVT+N +++ LCK R++ +A  LL+ 
Sbjct: 271 VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 330

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +RGV P+ CT+ TL+ G+C+ GK+++A +LF +M +   + D V+YN LI+G C+  +
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +++A  L+ +M S+ I P  VTY+ L     E  QVE A    DEM   G+  +  TY +
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G C++G + +  +  + + + K   D+  YN LI G  K  ++  A++L   +    
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV- 541
           + P+VVTYN++I G    G + +A  +F  M      PD  T+  +I+G +      +  
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570

Query: 542 ---NELLHKMKEKK 552
              +E+L + KEK+
Sbjct: 571 QLHDEMLQRGKEKR 584



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 242/458 (52%), Gaps = 6/458 (1%)

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G   L   A+  +  S    N  T N ++          +  A+ ++++     P+V+
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T+N +++   R G    A+ L + M +         KP  VTY++++ GLC+ G  DKA 
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKG------LKPGIVTYNSVLKGLCRSGMWDKAW 185

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F +M D  + PDV ++  LI G C   +  EA +++ EM  +G++P +V+F+ ++   
Sbjct: 186 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 245

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            +  KMD A   L  M   G+ P+   Y  ++ GFC  G ++ A  +   M   GC  D 
Sbjct: 246 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 305

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+YN L+NG CK + + +A  L  EM  +G+ P + T+ TL  G     +++ AL+LFD 
Sbjct: 306 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 365

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M    +  D  TY T IDG+C+ G + +A +L+  +   +   +   Y+ LID  C+ G+
Sbjct: 366 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQ 425

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A+     + +  ++PN++TYN +I+G C  G + K +     M  N  +PD+IT++ 
Sbjct: 426 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 485

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           LIHG+I+ ++     +LL+ M+++KV PD    +++++
Sbjct: 486 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 523



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 219/410 (53%), Gaps = 8/410 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-PNTVTYSTIIDGLCKEG 221
           E N  T N +++  C+      AL  F+++     E+   C  P+ VT++ ++D   + G
Sbjct: 92  EVNTYTLNIMVHNYCK------ALE-FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 144

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             + A AL   M  + + P +VTYNS++ GLC +  W++A  +F EM D GV P V +F 
Sbjct: 145 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 204

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++   C+  +++EA ++   M  RG++P+  +++ L+  F   GK++ A      M   
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D V Y ++I G+C+   + +AL +  EMV  G  P VVTYNTL  GL +  ++  A
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             L +EM+  GV  D  T+TT I G C  G + +A++LF T+   +   DI  YN LIDG
Sbjct: 325 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 384

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +C+ G L  A +L+  +    + PN VTY+I+I   C  GQ++ A     +M      P+
Sbjct: 385 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 444

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++T++ +I G+ R    SK  + L KM   KV PD    + ++   +K +
Sbjct: 445 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 72/367 (19%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           QP V  F++++    ++RK  EA     L++   V   A   N L+      G  + A +
Sbjct: 24  QPRV--FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 81

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKE------------------------------- 362
            +  + S   + +  + NI+++ YCK  E                               
Sbjct: 82  AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141

Query: 363 ----VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                E A++L   MVSKG+KP +VTYN++  GL      + A ++F EM   GVA D R
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA------W 472
           ++T  I G C+ G I EA+++++ +R    + D+ +++CLI    + G++  A       
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 473 ELFCSLPHGVL-----------------------------VPNVVTYNIMIQGLCNDGQM 503
             F  +P GV+                             +P+VVTYN ++ GLC + ++
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             A  L  +M E    PD+ TF  LIHG+    +  K  +L   M  +++ PD    + +
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381

Query: 564 VDLLVKN 570
           +D + + 
Sbjct: 382 IDGMCRQ 388


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 263/529 (49%), Gaps = 15/529 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EAF + +  +R    P  V+ +N+ +  L K +  D       +++     P   TY  
Sbjct: 58  DEAFSVLERAVRAGCEPDYVT-YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++   K GR+        +++    +P   T+  +I GL    R+ EA  +F  +   G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P+   Y  LI+GL + G    AL    +M       GV  +P+ V ++ +I  LC  G
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGV--EPDVVIHNLVIRQLCASG 234

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A A F ++ D++++    T+N L+  LC A    EA     +M ++   P++ T+ 
Sbjct: 235 NLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYT 293

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K  ++DEA   L   V+RG  P+A TY +++DG C +G++    E F  M + 
Sbjct: 294 SLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 353

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + D V+Y  LI+G+ K K + +A  +YR+M+  G   + VTYN +  GL +  +V  A
Sbjct: 354 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
              F  M+  G  A   TY+  +DG C  G +  AVELFR +    CE ++ +YN +I G
Sbjct: 414 YATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRG 473

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD---LFLDMEENAA 518
           LC++G+L  A+  F  L    L P+V T+N  + GLC   ++D   D   LF  M     
Sbjct: 474 LCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RLDTVGDGVELFESMVSQGT 531

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +P++ ++ +L+ G  R        E+ H+M  + V PD  + + ++  L
Sbjct: 532 SPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWL 580



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 237/468 (50%), Gaps = 16/468 (3%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N  CK G++    +    +   C +P+   F  +I GL  E R+ EA ++  +    G
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEM--PC-SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           CEP+ +TYN  I+GLC+      A  L ++M          C P TVTY+ ++DGL K G
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK------CLPTTVTYTALVDGLLKAG 125

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+A A+  QM ++  +P + TY  +I GL  A    EA+R+F++M+  G +P    + 
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185

Query: 282 VIMDELCKNRKMDEASRLLDLMVQ----RGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            ++  L K  K+DEA   L+ MV+    RGV P+   +N ++   C  G +  A   F  
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245

Query: 338 M-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           + +S+   H   ++N L+   CK +  EEA++  ++M  +   PT+ TY +L  G  ++ 
Sbjct: 246 LDDSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLG 303

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +++ AL    E    G   D  TYT+ IDGLCK G + E  E F  +R    E D   Y 
Sbjct: 304 RLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 363

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LIDG  K+  +  A  ++  +     V + VTYNI++ GLC  G++ +A   FL MEE 
Sbjct: 364 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEER 423

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
                V+T+  L+ GF      S   EL  +M ++   P+    +I++
Sbjct: 424 GCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 238/512 (46%), Gaps = 47/512 (9%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++  + ++IN  C+  R+   F    R +R+   P+  T+N  I GL    R+ +A  L
Sbjct: 39  PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 98

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYST 212
             K+    C P  +TY  L++GL + G    A+ + E+M   GN        P   TY+ 
Sbjct: 99  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN-------SPTLKTYTV 151

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-- 270
           +IDGL K G V++A+ +F+ M      PD   Y +LI GL      +EA     +M++  
Sbjct: 152 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211

Query: 271 --QGVQPSVV----------------------------------TFNVIMDELCKNRKMD 294
             +GV+P VV                                  TFN ++  LCK  + +
Sbjct: 212 CARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTE 271

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA   +  M +R   P   TY +L+DGF  +G+++ A          G   D V+Y  +I
Sbjct: 272 EAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSII 331

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G CK   VEE    + EM ++G +P  VTY  L  G  +   +  A +++ +M + G  
Sbjct: 332 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 391

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
             T TY   +DGLCK G + EA   F  +    C   +  Y+ L+DG C  G +  A EL
Sbjct: 392 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 451

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI- 533
           F  +      PN+V+YNI+I+GLC  G++ KA   F  + +    PDV TF+  +HG   
Sbjct: 452 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ 511

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           R++      EL   M  +   P+    SI++D
Sbjct: 512 RLDTVGDGVELFESMVSQGTSPNLHSYSILMD 543



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 259/530 (48%), Gaps = 40/530 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++  L+  L K    D       ++   G  P L TY ++I+   K GRV      
Sbjct: 109 PTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC----EPNVITYNTLIN 174
           F  +L +   P+A  + +LI GL    ++ EA     ++   GC    EP+V+ +N +I 
Sbjct: 169 FVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIR 228

Query: 175 GLCRTGHTMIALNLFEEMANG--------NGEIGVVCK--------------------PN 206
            LC +G+   AL  F+E+ +         N  +  +CK                    P 
Sbjct: 229 QLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPT 288

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY++++DG  K G +D+A     +  +    PD VTY S+I GLC      E    F 
Sbjct: 289 LFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFH 348

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM ++G +P  VT+  ++D   K + + +A R+   M+Q G   +  TYN ++DG C  G
Sbjct: 349 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 408

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           ++  A   F +ME  GC    V+Y+ L++G+C    V  A+ L+R M+ +G +P +V+YN
Sbjct: 409 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 468

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN-GYIIEAVELFRTLRI 445
            +  GL    ++  A   F+++ +  +  D  T+ +F+ GLC+    + + VELF ++  
Sbjct: 469 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVS 528

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++ +Y+ L+DG+C++G L+   E+F  +    + P+VV +N +I+ LC  G++D+
Sbjct: 529 QGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDE 588

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           A ++F ++E   +APD  ++  L+    R     +   L   MK +   P
Sbjct: 589 ALEVFRELERR-SAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 212/425 (49%), Gaps = 14/425 (3%)

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
             L+NGLC+TG    A+ L +EM          C P+ V ++ +I+GLC+E  +D+A ++
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---------CSPDMVAFTVVINGLCREKRLDEAFSV 63

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +       PD VTYN  I GLC A   ++A +L  +M ++   P+ VT+  ++D L K
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             ++DEA  +L+ MV++G  P   TY  ++DG    G++  A  +F  M   GC+ D   
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183

Query: 350 YNILINGYCKNKEVEEALSLYREMV----SKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           Y  LI+G  K  +++EAL    +MV    ++G++P VV +N +   L     +E AL  F
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           DE+  D +     T+   +  LCK     EA+   + +   +C   +  Y  L+DG  K 
Sbjct: 244 DELD-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           GRL  A            +P+ VTY  +I GLC  G++++  + F +M      PD +T+
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
             LI GF++     K + +  +M +   +      +I++D L K     ++  +FL  E 
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 422

Query: 586 QGEVG 590
           +G V 
Sbjct: 423 RGCVA 427



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 3/154 (1%)

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           DTR  T  ++GLCK G +  A+ L   L  + C  D+ A+  +I+GLC+  RL  A+ + 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
                    P+ VTYN+ I GLC   ++D A  L   M+E    P  +T+  L+ G ++ 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               +   +L +M EK   P     ++V+D L K
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSK 158


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/458 (34%), Positives = 234/458 (51%), Gaps = 15/458 (3%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L   F PNA T+N LI+G     ++ +A ++F+ +K+ G  PN  T NTL+ GLC 
Sbjct: 20  FKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCE 79

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL LF EM  G         P + +++ ++ G    G V  A A    M+  + 
Sbjct: 80  IGQMSSALKLFREMQAGP------FLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSS 133

Query: 239 NPDVVTYNSLIHGLC----HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           +    TYN ++ GLC     AN   +A   F EM   GV+P + ++++++  L  + +M 
Sbjct: 134 SVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMA 193

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L   M      P+  TYN LMDG+C +G+   A+ L   +   G + +  +Y+I+I
Sbjct: 194 EAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 250

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           N YCK  +VEEA  ++ +M+     P  VT+NTL  G  +   +E A+KLF EM++ G  
Sbjct: 251 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 310

Query: 415 ADTRTYTTFIDGLCKN-GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           A   TY T ID LCK  G +  AV+LF  L        I  YN LI G C + RL  A +
Sbjct: 311 ATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQ 370

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            F  +  G   PNV+TY+I+I GLC   +M +A     DM+ +   P V+T+  LI+GF 
Sbjct: 371 YFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFC 429

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +  E         KMK     P+  I + ++D L K E
Sbjct: 430 KCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAE 467



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 241/495 (48%), Gaps = 21/495 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N+L+    K           + + ++GL PN  T N L+   C+IG++S     
Sbjct: 30  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +    F P +A+ N L++G     R+ +A A    ++         TYN ++ GLC 
Sbjct: 90  FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149

Query: 179 TGHTM----IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
              +      A+  F+EM     E      P+  +Y  ++  L   G + +A ALF  M 
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVE------PDLESYHILLSALSDSGRMAEAHALFSAM- 202

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
               +PD++TYN L+ G C      EA+ L  E++  G +P+V T+++I++  CK  K++
Sbjct: 203 --TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVE 260

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  +   M++    PNA T+NTL+ GFC  G +  A +LF  ME +GCK   V+YN LI
Sbjct: 261 EAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLI 320

Query: 355 NGYCKNKE-VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           +  CK +  V  A+ L+ ++   G+ PT+VTYN+L  G  +  ++  A++ FDEM+    
Sbjct: 321 DSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-C 379

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           A +  TY+  IDGLCK   + EA +    ++       +  Y  LI+G CK G LK A  
Sbjct: 380 APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL 439

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            F  +      PN V +N +I GLC   + +    L   M      PDVIT++ LI G  
Sbjct: 440 FFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLC 499

Query: 534 RINEPSKVNELLHKM 548
             N       L   M
Sbjct: 500 SANRVEDAQRLFDGM 514



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/466 (32%), Positives = 246/466 (52%), Gaps = 28/466 (6%)

Query: 58  LRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYTYNILINCFC-- 107
           ++  P  P  +S NILL           A     D R +++ +     TYN+++   C  
Sbjct: 93  MQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATG--TYNLVLKGLCWE 150

Query: 108 --KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
                R+      F  +  S   P+  +++ L+  L    R+ EA ALF+   A  C P+
Sbjct: 151 NKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS---AMTCSPD 207

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           ++TYN L++G C+ G T  A +L +E+     E      PN  TYS II+  CK   V++
Sbjct: 208 IMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE------PNVFTYSIIINCYCKLDKVEE 261

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  +F++M + N  P+ VT+N+LI G C A    +A +LF EM   G + ++VT+N ++D
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321

Query: 286 ELCKNRK-MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
            LCK R  +  A  L + +   G+ P   TYN+L+ GFC   +++ A + F  ME   C 
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CA 380

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + ++Y+ILI+G CK + ++EA     +M + G  PTVVTY  L  G  +  +++ AL  
Sbjct: 381 PNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLF 440

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F++M+  G A +T  + T IDGLCK     + + L   +    C+ D+  YNCLI GLC 
Sbjct: 441 FEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCS 500

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           + R++ A  LF  +      PNV T+N +I+GLC   ++++AR++ 
Sbjct: 501 ANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 157/497 (31%), Positives = 247/497 (49%), Gaps = 21/497 (4%)

Query: 71  NILLASLAKNKHYDTRLNA-----TGLF-PNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           N LL+ L   + +D  L        GLF PN +TYN+LI  FCK G++      F  +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           S   PNA+T N+L+ GL    ++  A  LF +++A    P   ++N L+ G    G    
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG----FVDKAKALFLQMKDENINP 240
           AL   ++M   +  +       T TY+ ++ GLC E      +++A   F +MK   + P
Sbjct: 121 ALAHLQDMRKSSSSVA------TGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEP 174

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D+ +Y+ L+  L  +    EA  LF  M      P ++T+NV+MD  CK  +  EA  L+
Sbjct: 175 DLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLM 231

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             +++ G  PN  TY+ +++ +C + K+  A E+F  M    C  + V++N LI G+CK 
Sbjct: 232 KEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 291

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ-VEHALKLFDEMQRDGVAADTRT 419
             +E+A+ L+ EM   G K T+VTYNTL   L +    V  A+ LF++++  G+     T
Sbjct: 292 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 351

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y + I G C    + EA++ F  +   KC  ++  Y+ LIDGLCK  R+K A +    + 
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                P VVTY  +I G C  G++  A   F  M+    AP+ + F+ LI G  +    +
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470

Query: 540 KVNELLHKMKEKKVMPD 556
               LL  M  +   PD
Sbjct: 471 DGLRLLCHMHAEGCKPD 487



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 194/378 (51%), Gaps = 43/378 (11%)

Query: 65  PPVSSFNILLASLAKN---KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           P + S++ILL++L+ +          +A    P++ TYN+L++ +CKIG+          
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL++ + PN  T++ +I       ++ EA  +F K+    C PN +T+NTLI G C+ G 
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-GFVDKAKALFLQMKDENINP 240
              A+ LF EM     +IG  CK   VTY+T+ID LCK+ G V  A  LF +++   + P
Sbjct: 294 LEDAIKLFAEME----KIG--CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP 347

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            +VTYNSLI G C A   +EA + F EM +    P+V+T+++++D LCK R+M EA++ L
Sbjct: 348 TIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTL 406

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M   G  P   TY  L++GFC  G++  A   F  M+  GC  + V +N LI+G CK 
Sbjct: 407 EDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKA 466

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNT--------------------------------L 388
           +   + L L   M ++G KP V+TYN                                 L
Sbjct: 467 ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNVTTFNFL 526

Query: 389 FLGLFEIHQVEHALKLFD 406
             GL    +VE A  + D
Sbjct: 527 IRGLCAQKKVEEARNILD 544



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 170/330 (51%), Gaps = 11/330 (3%)

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N+L+ GL  A   ++A RLF E++     P+  T+NV++   CK  +M +A  +   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ PNA T NTL+ G C +G+++ A +LF  M++        S+NIL+ G+     V +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLF----EIHQVEHALKLFDEMQRDGVAADTRTYT 421
           AL+  ++M          TYN +  GL       +++E A++ F EM+  GV  D  +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             +  L  +G + EA  LF     + C  DI  YN L+DG CK G+   A  L   +   
Sbjct: 181 ILLSALSDSGRMAEAHALFSA---MTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              PNV TY+I+I   C   ++++A ++F+ M E+   P+ +TF+ LI GF +       
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 542 NELLHKMKEKKVMPDASIVS--IVVDLLVK 569
            +L  +M  +K+   A+IV+   ++D L K
Sbjct: 298 IKLFAEM--EKIGCKATIVTYNTLIDSLCK 325



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 162/311 (52%), Gaps = 7/311 (2%)

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N ++  L   RK D+A RL   ++     PNA TYN L+ GFC  G++++A  +F  M+S
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   +  + N L+ G C+  ++  AL L+REM +    PT  ++N L  G F   +V  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLC----KNGYIIEAVELFRTLRILKCELDIQAYN 456
           AL    +M++   +  T TY   + GLC        + +A+E F+ ++    E D+++Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+  L  SGR+  A  LF ++      P+++TYN+++ G C  GQ  +A+ L  ++ + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              P+V T+ ++I+ + ++++  +  E+  KM E   +P+A   + ++    K  +   +
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 577 LPSFLVQERQG 587
           +  F   E+ G
Sbjct: 298 IKLFAEMEKIG 308


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 244/480 (50%), Gaps = 6/480 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           F +   ++ LI   C + R    F  F  +      P   T NSL+      +R   A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L+ ++     + +V T+N +IN LC+ G    A +    M       GV  KPN VTY+T
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNT 261

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+ G C  G V+ A A+   MK + I PD  TY SLI G+C      EA ++F EM+ +G
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           ++PS V +N ++D  C    +D AS   D M+++G+ P   TYN+L+    +  + + AE
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   ++  G   D ++YNILINGYC+    ++A  L+ EM++ GIKPT  TY +L   L
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            + ++++ A  LF ++  +GV  D   +   IDG C N  +  A EL + +  +K   D 
Sbjct: 442 SKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             +N ++ G C+ G+++ A ELF  +    + P+ +++N +I G    G +  A  +  +
Sbjct: 502 VTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNE 561

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M +    P V+T++ L+ G  +  E     ELL +M  K + PD +    +++ + K  I
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 236/454 (51%), Gaps = 6/454 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P + T N L++ F K+ R    ++ +  + R     +  TFN +I  L  E +
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A      ++  G +PN++TYNT+++G C +G    A  +   M     E      P+
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE------PD 290

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + TY ++I G+CK+G +++A  +F +M  + + P  V YN+LI G C+  + + A     
Sbjct: 291 SFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +G+ P++ T+N ++  L   ++ DEA  ++  + ++G+ P+A TYN L++G+C   
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA 410

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              +A  L   M + G K    +Y  L++   K   ++EA  L++++ S+G+ P  + +N
Sbjct: 411 NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFN 470

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G      V+ A +L  +M R  V  D  T+ T + G C+ G + EA ELF  ++  
Sbjct: 471 ALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRR 530

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + D  ++N LI G  + G +K A+ +   +      P V+TYN ++QGLC + + D A
Sbjct: 531 GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA 590

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
            +L  +M      PD  T+  LI G  ++N P +
Sbjct: 591 EELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 215/421 (51%), Gaps = 13/421 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           A+ ++  M R+      V +FNI++        L K K +   +  +G+ PN+ TYN ++
Sbjct: 205 AWVLYAEMFRLRIKSS-VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +C  GRV         + R    P++ T+ SLI G+  + R+ EA+ +F ++   G  
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLR 323

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ + YNTLI+G C  G+  +A    +EM            P   TY+++I  L  E   
Sbjct: 324 PSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG------ISPTMSTYNSLIHALFMEQRT 377

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A+ +  +++++ I+PD +TYN LI+G C   +  +A  L  EM+  G++P+  T+  +
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L K  +M EA  L   +   GV P+A  +N L+DG C    +  A EL   M+ M  
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D+V++N ++ G+C+  +VEEA  L+ EM  +GIKP  +++NTL  G      ++ A +
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           + +EM   G      TY   + GLCKN     A EL + +       D   Y  LI+G+ 
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 464 K 464
           K
Sbjct: 618 K 618



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 48/282 (17%)

Query: 55  DYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCK 108
           D ML+   SP  +S++N L+ +L   +  D        +   G+ P+  TYNILIN +C+
Sbjct: 350 DEMLKKGISPT-MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
                  F+    +L S   P   T+ SL+  L  ++R+ EA  LF K+ + G  P+ I 
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIM 468

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           +N LI+G C   +   A  L ++M        +   P+ VT++TI+ G C+EG V++A+ 
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDR------MKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 229 LFLQMK-----------------------------------DENINPDVVTYNSLIHGLC 253
           LF +MK                                   D   NP V+TYN+L+ GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
              + + A+ L  EM+ +G+ P   T+  +++ + K    DE
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD---TRLNATGLFPNLYTYNILI 103
           +AF + D ML   + P+    +S   +L+   + K  D    ++ + G+ P+   +N LI
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  C    V   F     + R    P+  TFN++++G   E ++ EA  LF ++K  G +
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ I++NTLI+G  R G    A  +  EM +          P  +TY+ ++ GLCK    
Sbjct: 534 PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEG 587

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           D A+ L  +M  + + PD  TY +LI G+   N  +E K
Sbjct: 588 DLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 244/480 (50%), Gaps = 6/480 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           F +   ++ LI   C + R    F  F  +      P   T NSL+      +R   A  
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L+ ++     + +V T+N +IN LC+ G    A +    M       GV  KPN VTY+T
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS----GV--KPNIVTYNT 261

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+ G C  G V+ A A+   MK + I PD  TY SLI G+C      EA ++F EM+ +G
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           ++PS V +N ++D  C    +D AS   D M+++G+ P   TYN+L+    +  + + AE
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   ++  G   D ++YNILINGYC+    ++A  L+ EM++ GIKPT  TY +L   L
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            + ++++ A  LF ++  +GV  D   +   IDG C N  +  A EL + +  +K   D 
Sbjct: 442 SKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             +N ++ G C+ G+++ A ELF  +    + P+ +++N +I G    G +  A  +  +
Sbjct: 502 VTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNE 561

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M +    P V+T++ L+ G  +  E     ELL +M  K + PD +    +++ + K  I
Sbjct: 562 MLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 237/454 (52%), Gaps = 6/454 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P + T N L++ F K+ R    ++ +  + R     +  TFN +I  L  E +
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A      ++  G +PN++TYNT+++G C +G    A  +   M     E      P+
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE------PD 290

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + TY ++I G+CK+G +++A  +F +M  + + P  V YN+LI G C+  + + A     
Sbjct: 291 SFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +G+ P++ T+N ++  L   ++ DEA  ++  + ++G+ P+A TYN L++G+C   
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCA 410

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              +A  L   M + G K    +Y  L++   K   ++EA  L++++ S+G+ P V+ +N
Sbjct: 411 NAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFN 470

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G      V+ A +L  +M R  V  D  T+ T + G C+ G + EA ELF  ++  
Sbjct: 471 ALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRR 530

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + D  ++N LI G  + G +K A+ +   +      P V+TYN ++QGLC + + D A
Sbjct: 531 GIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLA 590

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
            +L  +M      PD  T+  LI G  ++N P +
Sbjct: 591 EELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 214/421 (50%), Gaps = 13/421 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           A+ ++  M R+      V +FNI++        L K K +   +  +G+ PN+ TYN ++
Sbjct: 205 AWVLYAEMFRLRIKSS-VYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +C  GRV         + R    P++ T+ SLI G+  + R+ EA+ +F ++   G  
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLR 323

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ + YNTLI+G C  G+  +A    +EM            P   TY+++I  L  E   
Sbjct: 324 PSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG------ISPTMSTYNSLIHALFMEQRT 377

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A+ +  +++++ I+PD +TYN LI+G C   +  +A  L  EM+  G++P+  T+  +
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L K  +M EA  L   +   GV P+   +N L+DG C    +  A EL   M+ M  
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D+V++N ++ G+C+  +VEEA  L+ EM  +GIKP  +++NTL  G      ++ A +
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           + +EM   G      TY   + GLCKN     A EL + +       D   Y  LI+G+ 
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 464 K 464
           K
Sbjct: 618 K 618



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 48/282 (17%)

Query: 55  DYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCK 108
           D ML+   SP  +S++N L+ +L   +  D        +   G+ P+  TYNILIN +C+
Sbjct: 350 DEMLKKGISPT-MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
                  F+    +L S   P   T+ SL+  L  ++R+ EA  LF K+ + G  P+VI 
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIM 468

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           +N LI+G C   +   A  L ++M        +   P+ VT++TI+ G C+EG V++A+ 
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDR------MKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 229 LFLQMK-----------------------------------DENINPDVVTYNSLIHGLC 253
           LF +MK                                   D   NP V+TYN+L+ GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
              + + A+ L  EM+ +G+ P   T+  +++ + K    DE
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 11/219 (5%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD---TRLNATGLFPNLYTYNILI 103
           +AF + D ML   + P+    +S   +L+   + K  D    ++ + G+ P++  +N LI
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  C    V   F     + R    P+  TFN++++G   E ++ EA  LF ++K  G +
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ I++NTLI+G  R G    A  +  EM +          P  +TY+ ++ GLCK    
Sbjct: 534 PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG------FNPTVLTYNALVQGLCKNQEG 587

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           D A+ L  +M  + + PD  TY +LI G+   N  +E K
Sbjct: 588 DLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/472 (33%), Positives = 245/472 (51%), Gaps = 7/472 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            Y+I+I   CK    +LG      +    + P+ ATF S+I    A+  ++EA  L  ++
Sbjct: 297 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 356

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G   N++   +L+ G C  G+   ALNLF ++     E G+   PN VTYS +I+G 
Sbjct: 357 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT----EDGLF--PNKVTYSVLIEGC 410

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G ++KA  L+ QMK   I P V   NSL+ G   A  W EA +LF E +D GV  ++
Sbjct: 411 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NI 469

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+N++M  LCK  KMDEA  LLD MV +G+ PN  +YN ++ G C  G ++ A  +F  
Sbjct: 470 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 529

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M +   K + V+Y+ILI+G  K  + E+AL L+ +M+S  I PT  T+NT+  GL ++ Q
Sbjct: 530 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 589

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +  A         +G      TY + +DG  K G I  A+ ++R +       ++  Y  
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 649

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+G CKS R+  A +    +    L  +V  Y+ +I G C    M+ A+DLF ++ E  
Sbjct: 650 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 709

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +P+ I ++ +I GF  +N          KM   ++  D    + ++D L+K
Sbjct: 710 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLK 761



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 266/520 (51%), Gaps = 43/520 (8%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           NL     L+  +C  G +      F +I      PN  T++ LI+G      I +A+ L+
Sbjct: 364 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 423

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
           T++K  G  P+V   N+L+ G  +      A  LF+E      + GV    N  TY+ ++
Sbjct: 424 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV----DCGVA---NIFTYNIMM 476

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             LCK G +D+A +L   M ++ + P+VV+YN +I G C   + + A  +F +M+ + ++
Sbjct: 477 SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 536

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+VVT+++++D   K    ++A  L D M+   + P   T+NT+++G C +G+++ A + 
Sbjct: 537 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 596

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
             +    G     ++YN +++G+ K   ++ AL++YREM   G+ P VVTY +L  G  +
Sbjct: 597 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL--------------- 439
            ++++ ALK  DEM+  G+  D   Y+  IDG CK   +  A +L               
Sbjct: 657 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 716

Query: 440 -------FRTLRILKCEL-------------DIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
                  FR L  ++  L             D+  Y  LIDGL K GRL FA +L+  + 
Sbjct: 717 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 776

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              +VP+++T+++++ GLCN GQ++ AR +  +M+     P V+ ++ LI G+ R     
Sbjct: 777 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 836

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           +   L  +M ++ ++PD     I+++   K + SL S PS
Sbjct: 837 EAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL-SRPS 875



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 246/480 (51%), Gaps = 40/480 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG----- 140
           ++   GLFPN  TY++LI   C  G +      + ++  +   P+    NSL++G     
Sbjct: 390 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAP 449

Query: 141 -----------------------------LHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
                                        L    ++ EA +L   +   G  PNV++YN 
Sbjct: 450 LWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 509

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I G CR G+  +A ++F +M      +    KPN VTYS +IDG  K+G  +KA  LF 
Sbjct: 510 MILGHCRKGNMDMASSVFSDM------LARDLKPNVVTYSILIDGNFKKGDSEKALDLFD 563

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM   NI P   T+N++I+GLC     +EA+      +++G  PS +T+N I+D   K  
Sbjct: 564 QMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 623

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +D A  +   M + GV PN  TY +L++GFC   +I+ A +    M   G + D  +Y+
Sbjct: 624 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 683

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+G+CK +++E A  L+ E++  G+ P  + YN++  G  +++ +E AL  + +M  D
Sbjct: 684 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 743

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            +  D  TYTT IDGL K G ++ A +L+  +       DI  ++ L++GLC  G+L+ A
Sbjct: 744 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 803

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++   +    + P+V+ YN +I G   +G + +A  L  +M +    PD +T+D+LI+G
Sbjct: 804 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 196/388 (50%), Gaps = 19/388 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  + D M+      P V S+N ++    +  + D      + + A  L PN+ TY+I
Sbjct: 486 DEACSLLDNMVN-QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 544

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF- 160
           LI+   K G        F ++L     P   TFN++I GL    ++ EA     KLK F 
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR---DKLKNFL 601

Query: 161 --GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P+ +TYN++++G  + G+   AL ++ EM     E GV   PN VTY+++I+G C
Sbjct: 602 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC----EFGV--SPNVVTYTSLINGFC 655

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   +D A     +M+++ +  DV  Y++LI G C   D   A+ LF E+++ G+ P+ +
Sbjct: 656 KSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI 715

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +N ++        M+ A      M+   +  +  TY TL+DG    G++  A +L+  M
Sbjct: 716 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 775

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S G   D +++++L+NG C   ++E A  +  EM  K + P+V+ YNTL  G F    +
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 835

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + A  L DEM   G+  D  TY   I+G
Sbjct: 836 KEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 202/443 (45%), Gaps = 7/443 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  +   FN L+      +RI  A   F  +      P V   N L+  L R        
Sbjct: 186 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 245

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L+ +M    G  G     +  T   ++    KEG V++A+  F + K+  +  D   Y+
Sbjct: 246 DLYNKMV-LRGIYG-----DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYS 299

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            +I  +C   + N    L  EM ++G  PS  TF  ++        M EA RL + M+  
Sbjct: 300 IIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINC 359

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G   N     +LM G+C  G ++ A  LF  +   G   + V+Y++LI G C +  +E+A
Sbjct: 360 GKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 419

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             LY +M   GI P+V   N+L  G  +    E A KLFDE    GV A+  TY   +  
Sbjct: 420 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSW 478

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G + EA  L   +       ++ +YN +I G C+ G +  A  +F  +    L PN
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 538

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTY+I+I G    G  +KA DLF  M     AP   TF+ +I+G  ++ + S+  + L 
Sbjct: 539 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 598

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
              E+  +P     + +VD  +K
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIK 621



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 159/374 (42%), Gaps = 34/374 (9%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D   +N L++    AN    A   F  M+ Q V P V   N+++  L +   + E   L 
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + MV RG+  +  T + ++      G++  AEE F   +  G K D  +Y+I+I   CK 
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
                 L L  EM  +G  P+  T+ ++ +       +  AL+L +EM   G   +    
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC---- 476
           T+ + G C  G +  A+ LF  +       +   Y+ LI+G C SG ++ A EL+     
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428

Query: 477 -----------SLPHGVL-------------------VPNVVTYNIMIQGLCNDGQMDKA 506
                      SL  G L                   V N+ TYNIM+  LC  G+MD+A
Sbjct: 429 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEA 488

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M      P+V++++ +I G  R       + +   M  + + P+    SI++D 
Sbjct: 489 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548

Query: 567 LVKNEISLKSLPSF 580
             K   S K+L  F
Sbjct: 549 NFKKGDSEKALDLF 562



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 130/340 (38%), Gaps = 57/340 (16%)

Query: 252 LCHANDWNEAKRLFIEMMDQ-----GV--------------------------------Q 274
           LCH ND   A R F     Q     GV                                 
Sbjct: 108 LCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSD 167

Query: 275 PSVVTF--------------------NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           PS V F                    N +++   +  +++ A    + M+ + V P    
Sbjct: 168 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 227

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
            N L+        I    +L+  M   G   D  + ++++    K   VEEA   +RE  
Sbjct: 228 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK 287

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            +G+K     Y+ +   + +       L+L +EM+  G      T+T+ I      G ++
Sbjct: 288 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 347

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EA+ L   +      +++     L+ G C  G L  A  LF  +    L PN VTY+++I
Sbjct: 348 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           +G CN G ++KA +L+  M+ N   P V   + L+ G+++
Sbjct: 408 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 16/179 (8%)

Query: 3   LESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHP 62
           +ES  +  F      +S  R  ++S++  FRDL   E          A   +  M+    
Sbjct: 695 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEA---------ALVWYKKMINDR- 744

Query: 63  SPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
            P  + ++  L+  L K             + + G+ P++ T+++L+N  C  G++    
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 804

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                + R   TP+   +N+LI G   E  + EA  L  ++   G  P+ +TY+ LING
Sbjct: 805 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 164/527 (31%), Positives = 261/527 (49%), Gaps = 59/527 (11%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +RL ++   PN++   +LI  F ++G V      + ++      P     N ++ GL  +
Sbjct: 117 SRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKK 171

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            R      ++  + A G  PNV+TY TLI+G CR G  + A  LF+EM      I     
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM------IEKKIF 225

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  V Y+ +I GLC E  + +A+++F  M++  + P++ TYN+++ G C      +A  L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           + EM+  G+ P+VVTF +++D LCK  +M  A + L  M   GV PN   YN L+DG+C 
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 325 MGK--------------------------------INRAEELFGSMESM---GCKHDDVS 349
            G                                 ++R EE  G ++ M   G   + V+
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN LI+GYCK   +E+A+ +  +M  KGI+P ++T++TL  G  +  ++E A+ L+ EM 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G+  D   YT  IDG  K+G   EA  L + ++      ++   +CLIDGLCK GR+ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 470 FAWELFCS-------------LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            A +LF +             L   +  PN V Y  +IQGLC DG++ KA   F DM  +
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
              PDV T  ++I G  R      V  L   + +  ++P++S+  ++
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 235/496 (47%), Gaps = 60/496 (12%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + + N++L  L K   +DT         A G  PN+ TY  LI+  C+ G     F  
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++     P    +  LI+GL  ESRI EA ++F  ++  G  PN+ TYNT+++G C+
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             H   AL L++EM  G+G +     PN VT+  +IDGLCK   +  A+   + M    +
Sbjct: 276 IAHVKKALELYQEML-GDGLL-----PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++  YN LI G C A + +EA  L  E+    + P V T+++++  LC   +M+EA  
Sbjct: 330 VPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M ++G  PNA TYNTL+DG+C  G + +A E+   M   G + + ++++ LI+GYC
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-------- 410
           K  ++E A+ LY EMV KG+ P VV Y  L  G F+    + A +L  EMQ         
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 411 ------DGVAADTRT----------------------------------YTTFIDGLCKN 430
                 DG+  D R                                   YT  I GLC +
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I +A + F  +R      D+     +I G  ++  L+    L   +    ++PN   Y
Sbjct: 570 GRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVY 629

Query: 491 NIMIQGLCNDGQMDKA 506
            ++ +G    G +  A
Sbjct: 630 RVLAKGYEESGYLKSA 645



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 141/419 (33%), Positives = 213/419 (50%), Gaps = 11/419 (2%)

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F    R+  S FTPN   F  LI        + EA  ++ K+      P +   N +++G
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDG 167

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L + G       ++ +M            PN VTY T+IDG C++G   KA  LF +M +
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGAS------PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + I P VV Y  LI GLC  +  +EA+ +F  M + G+ P++ T+N +MD  CK   + +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L   M+  G+ PN  T+  L+DG C   ++  A +    M S G   +   YN LI+
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           GYCK   + EALSL+ E+    I P V TY+ L  GL  + ++E A  L  EM++ G   
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TY T IDG CK G + +A+E+   +     E +I  ++ LIDG CK+G+++ A  L+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
             +    L+P+VV Y  +I G   DG   +A  L  +M+E    P+V T   LI G  +
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 214/431 (49%), Gaps = 11/431 (2%)

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY-----------STIIDGLCK 219
           ++ N L R   +    N+F  +     E+G+V +   V Y           + ++DGL K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G  D    ++  M     +P+VVTY +LI G C   D+ +A RLF EM+++ + P+VV 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + +++  LC   ++ EA  +   M   G+ PN  TYNT+MDG+C +  + +A EL+  M 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G   + V++ ILI+G CK  E+  A     +M S G+ P +  YN L  G  +   + 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL L  E+++  +  D  TY+  I GLC    + EA  L + ++      +   YN LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DG CK G ++ A E+   +    + PN++T++ +I G C  G+M+ A  L+ +M      
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PDV+ +  LI G  +     +   L  +M+E  + P+   +S ++D L K+     ++  
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 580 FLVQERQGEVG 590
           FL +      G
Sbjct: 531 FLAKTGTDTTG 541



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 216/478 (45%), Gaps = 62/478 (12%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVS 68
           +  F ++   + D+  R    NV+T               +AF +FD M+      P V 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE-KKIFPTVV 229

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            + IL+  L               +  +G+ PNLYTYN +++ +CKI  V      +  +
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L     PN  TF  LI GL     ++ A      + +FG  PN+  YN LI+G C+ G+ 
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 183 MIALNLFEE-------------------------MANGNGEIGVVCK----PNTVTYSTI 213
             AL+L  E                         M   +G +  + K    PN VTY+T+
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDG CKEG ++KA  +  QM ++ I P+++T+++LI G C A     A  L+ EM+ +G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VV +  ++D   K+    EA RL   M + G+ PN  T + L+DG C  G+I+ A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 334 LF---------GS----MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           LF         GS    ++   C  + V Y  LI G C +  + +A   + +M   G++P
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            V T   +  G F    +   + L  ++ + G+  ++  Y     G  ++GY+  A+ 
Sbjct: 590 DVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 187/371 (50%), Gaps = 29/371 (7%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +F IL+  L K       + +   + + G+ PN++ YN LI+ +CK G +S     
Sbjct: 296 PNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL 355

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              I +    P+  T++ LIKGL    R+ EA  L  ++K  G  PN +TYNTLI+G C+
Sbjct: 356 HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCK 415

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A+ +  +M     E G+  +PN +T+ST+IDG CK G ++ A  L+ +M  + +
Sbjct: 416 EGNMEKAIEVCSQMT----EKGI--EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVV Y +LI G     +  EA RL  EM + G+ P+V T + ++D LCK+ ++ +A +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 299 LLDLMVQRGV---------------RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           L   + + G                 PN   Y  L+ G C  G+I +A + F  M   G 
Sbjct: 530 LF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + D  +  ++I G+ +   + + + L  +++  GI P    Y  L  G  E   ++ AL+
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647

Query: 404 LFDEMQRDGVA 414
             +++   G+ 
Sbjct: 648 CSEDLSGIGIG 658


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 250/480 (52%), Gaps = 6/480 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P + TYN +++ FCK G+V        ++ +    PN  T+N L+ GL     + +A
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++   G E +  TY+ LI G C  G    A  L EEM +     G V  P  VTY
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSR----GAV--PTLVTY 298

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TI+ GLCK G V  A+ L   M ++N+ PD+V+YN+LI+G     +  EA  LF E+  
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ PSVVT+N ++D LC+   +D A RL D M++ G  P+  T+  L+ GFC +G +  
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+ELF  M + G + D  +Y   I G  K  +  +A  +  EM+++G  P ++TYN    
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL ++  ++ A +L  +M  +G+  D  TYT+ I      G++ +A  +F  +       
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            +  Y  LI      GRLK A   F  +    + PNV+TYN +I GLC   +MD+A   F
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +M+    +P+  T+ +LI+    +    +   L   M ++++ PD+   S ++  L K+
Sbjct: 599 TEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKD 658



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/467 (33%), Positives = 246/467 (52%), Gaps = 45/467 (9%)

Query: 141 LHAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           ++A+  ++E   L F K+ + G  P++   N ++  L R   +  ++++  E+ N   E 
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLR-LLRDRDS--SIDVAREVYNVMVEC 184

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           G+  +P  VTY+T++D  CK+G V +A  L LQM+     P+ VTYN L++GL H+ +  
Sbjct: 185 GI--RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELE 242

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +AK L  EM+  G++ S  T++ ++   C+  ++DEASRL + M+ RG  P   TYNT+M
Sbjct: 243 QAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIM 302

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
            G C  G+++ A +L   M +     D VSYN LI GY +   + EA  L+ E+  +G+ 
Sbjct: 303 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV 362

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P+VVTYNTL  GL  +  ++ A++L DEM + G   D  T+T  + G CK G +  A EL
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKEL 422

Query: 440 FRTL--------------RI--------------LKCEL-------DIQAYNCLIDGLCK 464
           F  +              RI              ++ E+       D+  YN  IDGL K
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            G LK A EL   + +  LVP+ VTY  +I      G + KAR +FL+M      P V+T
Sbjct: 483 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVT 542

Query: 525 FDMLIHGFIRINEPSKVNELLH--KMKEKKVMPDASIVSIVVDLLVK 569
           + +LIH +  +    K+  +LH  +M EK V P+    + +++ L K
Sbjct: 543 YTVLIHSYA-VRGRLKL-AILHFFEMHEKGVHPNVITYNALINGLCK 587



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 229/474 (48%), Gaps = 18/474 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N +L S  K            ++   G  PN  TYN+L+N     G +      
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +LR     +A T++ LI+G   + ++ EA+ L  ++ + G  P ++TYNT++ GLC+
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L + M N N        P+ V+Y+T+I G  + G + +A  LF +++   +
Sbjct: 308 WGRVSDARKLLDVMVNKN------LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGL 361

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P VVTYN+LI GLC   D + A RL  EM+  G  P V TF +++   CK   +  A  
Sbjct: 362 VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKE 421

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM---GCKHDDVSYNILIN 355
           L D M+ RG++P+   Y T + G   +G  ++A   FG  E M   G   D ++YN+ I+
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA---FGMQEEMLARGFPPDLITYNVFID 478

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G  K   ++EA  L ++M+  G+ P  VTY ++         +  A  +F EM   G+  
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
              TYT  I      G +  A+  F  +       ++  YN LI+GLCK  ++  A++ F
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
             +    + PN  TY I+I   CN G   +A  L+ DM +    PD  T   L+
Sbjct: 599 TEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALL 652



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 203/398 (51%), Gaps = 29/398 (7%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF---LQMKDENINP 240
           +AL  F       G      K + +TY+ I+D L + G +  A  +    + +K EN   
Sbjct: 63  VALRFFRWAERQTG-----FKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMEN--- 114

Query: 241 DVVTYNSLIHGLCHANDWNEAKR--------LFIEMMDQGVQPSVVTFNVIMDELCKNR- 291
                  +   +     W  AK+        +F +M+ +G+ P +   N ++  L ++R 
Sbjct: 115 -----GVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVL-RLLRDRD 168

Query: 292 -KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
             +D A  + ++MV+ G+RP   TYNT++D FC  GK+  A +L   M+ MGC  +DV+Y
Sbjct: 169 SSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTY 228

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N+L+NG   + E+E+A  L +EM+  G++ +  TY+ L  G  E  Q++ A +L +EM  
Sbjct: 229 NVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS 288

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G      TY T + GLCK G + +A +L   +       D+ +YN LI G  + G +  
Sbjct: 289 RGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE 348

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A+ LF  L    LVP+VVTYN +I GLC  G +D A  L  +M ++   PDV TF +L+ 
Sbjct: 349 AFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVR 408

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPD--ASIVSIVVDL 566
           GF ++       EL  +M  + + PD  A I  IV +L
Sbjct: 409 GFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL 446



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 6/160 (3%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           H +   +   +++   L K +     + + G+FP++ TY +LI+ +   GR+ L  + F 
Sbjct: 505 HVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 564

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      PN  T+N+LI GL    ++ +A   FT+++A G  PN  TY  LIN  C  G
Sbjct: 565 EMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLG 624

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           H   AL L+++M +         +P++ T+S ++  L K+
Sbjct: 625 HWQEALRLYKDMLDRE------IQPDSCTHSALLKHLNKD 658


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/436 (33%), Positives = 231/436 (52%), Gaps = 37/436 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN--ATGLFPN 95
           +EGD++     +A+  +  ML    SP  V+ +N ++A+L+K +  D  +      + PN
Sbjct: 23  KEGDVD-----KAYITYHEMLDRRVSPDAVT-YNSIIAALSKAQAMDRAMEVLTVMVMPN 76

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
            +TYN +++ +C  G+       F ++      P+  T+NSL+  L    +  EA  +F 
Sbjct: 77  CFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFD 136

Query: 156 KLKAFGCEPNVITYNTLINGLCRTG-----HTMIALNLFEEMANGNGEIGV-VCK----- 204
            +   G +P++ TY TL++G    G     H ++AL +   M   +    + +C      
Sbjct: 137 SMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQE 196

Query: 205 ------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
                             PN V Y T+IDGLCK G +D A   F QM D+ + P+VV Y 
Sbjct: 197 KVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYT 256

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           SLIH LC  + W +A+ L  E++DQG+ P++V FN I+D LCK  ++ E+ +L DL+   
Sbjct: 257 SLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHI 316

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           GV P+  TY+TL+DG+CL GK++ A +L   M S+G K D V+Y+ LINGYCK   +E+A
Sbjct: 317 GVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDA 376

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           L+L++EM S G+ P ++TYN +  GLF   +   A +L+  +   G   +  TY   +  
Sbjct: 377 LALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMD 436

Query: 427 LCKNGYIIEAVELFRT 442
             K   ++     FRT
Sbjct: 437 FAKTNSLMMHFGCFRT 452



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 225/438 (51%), Gaps = 45/438 (10%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P+V++YNT+I+GL + G    A   + EM +          P+ VTY++II  L K  
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR------VSPDAVTYNSIIAALSKAQ 60

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+A  +   M    + P+  TYNS++HG C +    +A  +F +M   G++P VVT+N
Sbjct: 61  AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            +MD LCKN K  EA ++ D MV+RG++P+  TY TL+ G+   G +    +L   M   
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + D   +NILI  Y K ++V+E + ++ +M  +G+ P  V Y T+  GL ++ +++ A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 402 LKLFDEMQRDGVAADTRTYT-----------------------------------TFIDG 426
           +  F++M   G+  +   YT                                   T +D 
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G +IE+ +LF  L  +    D+  Y+ LIDG C +G++  A +L   +    L P+
Sbjct: 297 LCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            VTY+ +I G C   +M+ A  LF +ME N   PD+IT+++++HG  R    +   EL  
Sbjct: 357 SVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYA 416

Query: 547 KMKEKKVMPDASIVSIVV 564
           ++ E     + S  +I++
Sbjct: 417 RITESGTQLELSTYNIIL 434



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 232/443 (52%), Gaps = 10/443 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++ +YN +I+   K G V   +I +  +L    +P+A T+NS+I  L     +  A  +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
            T +      PN  TYN++++G C +G +  A+ +F +M +   E      P+ VTY+++
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE------PDVVTYNSL 118

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +D LCK G   +A+ +F  M    + PD+ TY +L+HG        E   L   M+  G+
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           Q     FN+++    K  K+DE   +   M Q+G+ PNA  Y T++DG C +G+++ A  
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            F  M   G   + V Y  LI+  C   + E+A  L  E++ +GI P +V +NT+   L 
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  +V  + KLFD +   GV  D  TY+T IDG C  G +  A++L   +  +  + D  
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y+ LI+G CK  R++ A  LF  +    + P+++TYNI++ GL    +   A++L+  +
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418

Query: 514 EENAAAPDVITFDMLIHGFIRIN 536
            E+    ++ T+++++  F + N
Sbjct: 419 TESGTQLELSTYNIILMDFAKTN 441



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 158/314 (50%), Gaps = 5/314 (1%)

Query: 268 MMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           M D G   P VV++N I+D L K   +D+A      M+ R V P+A TYN+++       
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++RA E+   M    C     +YN +++GYC + + E+A+ ++R+M S GI+P VVTYN
Sbjct: 61  AMDRAMEVLTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L   L +  +   A K+FD M + G+  D  TY T + G    G ++E  +L   +   
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +LD   +N LI    K  ++     +F  +    L PN V Y  +I GLC  G++D A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
              F  M +    P+V+ +  LIH     ++  K  EL+ ++ ++ + P+    + ++D 
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 567 LVKNEISLKSLPSF 580
           L K    ++S   F
Sbjct: 297 LCKEGRVIESKKLF 310



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 167/333 (50%), Gaps = 15/333 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN----KHYD--TRLNATGLFPNLYTYNIL 102
           EA  IFD M++     P ++++  LL   A      + +D    +   G+  + + +NIL
Sbjct: 130 EARKIFDSMVK-RGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  + K  +V    + F ++ +   TPNA  + ++I GL    R+ +A   F ++   G 
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248

Query: 163 EPNVITYNTLINGLCRTGHTMIALNL-FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            PNV+ Y +LI+ LC       A  L FE +  G         PN V ++TI+D LCKEG
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQG-------INPNIVFFNTILDSLCKEG 301

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V ++K LF  +    +NPDV+TY++LI G C A   + A +L   M+  G++P  VT++
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYS 361

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            +++  CK  +M++A  L   M   GV P+  TYN ++ G     +   A+EL+  +   
Sbjct: 362 TLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITES 421

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           G + +  +YNI++  + K   +      +R  V
Sbjct: 422 GTQLELSTYNIILMDFAKTNSLMMHFGCFRTYV 454


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 169/559 (30%), Positives = 263/559 (47%), Gaps = 43/559 (7%)

Query: 42  INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNI 101
           +N++ PN    I + M R+       SS N L   L   +  + R++A      L  YN+
Sbjct: 117 LNILVPNGYLRIAENM-RILMIKSTDSSENALFV-LEMLRSMNRRVDAFKFKLTLRCYNM 174

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+    +   +      +  +L    TPN  T N+++ G      ++EA    +K+   G
Sbjct: 175 LLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAG 234

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              +  TY +LI G CR  +   A  +F  M N        C  N V+Y+ +I G C+  
Sbjct: 235 LSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG------CLRNEVSYTNLIHGFCEAR 288

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A  LF QM ++N  P V TY  +I  LC      EA  +F EM ++  QP+V T+ 
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++  LC++   D+A ++L+ M+++G+ P+  TYN L+DG+C  G    A E+   MES 
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
            C  +  +YN LI G+C+ K + +A+SL  +M+ + ++P VVTYN L  G  +   +  A
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            KL   M   G+  D  TY+ FID LCK G + EA  LF +L+    + +   Y+ LIDG
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN---------------------- 499
            CK G++     L   +     VPN +TYN +I G C                       
Sbjct: 529 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 588

Query: 500 -------------DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
                        D + D+A D+F  M    + PDV  +   IH +           L+ 
Sbjct: 589 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 648

Query: 547 KMKEKKVMPDASIVSIVVD 565
           KM  K +MPD  + ++ +D
Sbjct: 649 KMNAKGIMPDTMLYTLFID 667



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 234/504 (46%), Gaps = 35/504 (6%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           ++++    +P + TY ++I   C++GR +     F  +      PN  T+  LI  L  +
Sbjct: 298 SQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCED 357

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           S   +A  +   +   G  P+V+TYN LI+G C+ G +  AL +   M + N      C 
Sbjct: 358 SNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN------CS 411

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN  TY+ +I G C+   + KA +L  +M +  + P+VVTYN LIHG C   D   A +L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M + G+ P   T++V +D LCK   ++EA  L + + ++G++ N   Y+TL+DG+C 
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +GK++    L   M S GC  + ++YN LI+GYCK K  +EA  L   M+ + I+P   T
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L   L +  + + A  +FD+M   G   D   YT FI   C +G + +A  L   + 
Sbjct: 592 YTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMN 651

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 D   Y   ID   + G +  A+ +   +      P+  TY+ +I+ L N    +
Sbjct: 652 AKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKE 711

Query: 505 KAR-----------------------------DLFLDMEENAAAPDVITFDMLIHGFIRI 535
            +                              DLF  M E+  AP+  T+   I G  ++
Sbjct: 712 VSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKV 771

Query: 536 NEPSKVNELLHKMKEKKVMPDASI 559
                 + L   MKEK   P+  I
Sbjct: 772 GCLEVAHRLFDHMKEKGQSPNEDI 795



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 229/487 (47%), Gaps = 33/487 (6%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           L ++ + + Y +++   GL  + +TY  LI  +C+   V      F  +       N  +
Sbjct: 217 LGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVS 276

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           + +LI G     R+ EA  LF+++    C P V TY  +I  LC+ G    ALN+F+EM 
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMT 336

Query: 194 -------------------------------NGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
                                          NG  E G++  P+ VTY+ +IDG CK+G 
Sbjct: 337 EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLI--PSVVTYNALIDGYCKKGL 394

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
              A  +   M+  N +P+  TYN LI G C   + ++A  L  +M+++ +QP+VVT+N+
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++   CK   +  A +LL LM + G+ P+  TY+  +D  C  G +  A  LF S++  G
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K ++V Y+ LI+GYCK  +V +   L  +M+S G  P  +TYN+L  G  +    + A 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L D M +  +     TYT  ID L K+    +A ++F  +       D+  Y   I   
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C  GRLK A  L C +    ++P+ + Y + I      G +D A  +   M E    P  
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSY 694

Query: 523 ITFDMLI 529
            T+  LI
Sbjct: 695 YTYSCLI 701



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 164/575 (28%), Positives = 260/575 (45%), Gaps = 44/575 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR---LNA---TGLFPNLYTYNIL 102
           EA  +F  M   H   P V ++ +L+ SL ++ ++D     LN     GL P++ TYN L
Sbjct: 327 EALNMFKEMTEKH-CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ +CK G  +        +  +  +PNA T+N LI G      I +A +L  K+     
Sbjct: 386 IDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL 445

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           +PNV+TYN LI+G C+ G    A  L   M     E G+V  P+  TYS  ID LCK G 
Sbjct: 446 QPNVVTYNILIHGQCKEGDLGSAYKLLSLM----NESGLV--PDEWTYSVFIDTLCKRGL 499

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V++A++LF  +K++ I  + V Y++LI G C     ++ + L  +M+  G  P+ +T+N 
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK +   EA  L+D+M++R + P A TY  L+D      + ++A ++F  M S G
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIHQVEHA 401
              D   Y   I+ YC +  +++A  L  +M +KGI P  + Y TLF+  +     ++ A
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLY-TLFIDAYGRFGSIDGA 678

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGL----------------------------CKNGYI 433
             +   M   G      TY+  I  L                            C     
Sbjct: 679 FGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVD 738

Query: 434 IE-AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
            E  ++LF  +    C  +   Y   I GLCK G L+ A  LF  +      PN   YN 
Sbjct: 739 YEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNS 798

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           ++   C  G   +A      M EN   P + +  +L+ G        K   +     + +
Sbjct: 799 LLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCE 858

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              D  +  +++D L+K  +S K    F + E QG
Sbjct: 859 YNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQG 893



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 220/508 (43%), Gaps = 41/508 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+    + K+    ++         L PN+ TYNILI+  CK G +   +  
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  S   P+  T++  I  L     + EA +LF  LK  G + N + Y+TLI+G C+
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G       L ++M +        C PN++TY+++IDG CKE    +A+ L   M   +I
Sbjct: 532 VGKVSDGRFLLDKMLSAG------CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P   TY  LI  L   +++++A  +F +M+  G  P V  +   +   C + ++ +A  
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEV 645

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN--G 356
           L+  M  +G+ P+   Y   +D +   G I+ A  +   M  +GC+    +Y+ LI    
Sbjct: 646 LICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLS 705

Query: 357 YCKNKEV---------------------------EEALSLYREMVSKGIKPTVVTYNTLF 389
             K KEV                           E  L L+ +M   G  P   TY    
Sbjct: 706 NAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFI 765

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL ++  +E A +LFD M+  G + +   Y + +   C+ G   EA+     +   +  
Sbjct: 766 TGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHL 825

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             + +   L+ GL   G  + A  +FCS        + + + ++I GL   G  DK  DL
Sbjct: 826 PHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDL 885

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINE 537
           F  ME         T+ MLI GF  I E
Sbjct: 886 FGIMETQGCQIHPKTYSMLIEGFDGIQE 913



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 148/351 (42%), Gaps = 42/351 (11%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  + D M++     P   ++ IL+ +L K+  +D       ++ +TG  P+++ Y   
Sbjct: 572 EARLLVDIMIK-RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAF 630

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ +C  GR+    +   ++      P+   +   I        I  A  +  ++   GC
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690

Query: 163 EPNVITYNTLINGLC-----------------------------RTGHTMIALNLFEEMA 193
           EP+  TY+ LI  L                              R       L+LF +MA
Sbjct: 691 EPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMA 750

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN  TY   I GLCK G ++ A  LF  MK++  +P+   YNSL+   C
Sbjct: 751 EHG------CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSC 804

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
               + EA R    M++    P + +  +++  L      ++A R+    +Q     +  
Sbjct: 805 QLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEM 864

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            +  L+DG    G  ++  +LFG ME+ GC+    +Y++LI G+   +E++
Sbjct: 865 VWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 6/254 (2%)

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           ++  +NR  + F    ++ C      YN+L+    +   ++E  S+Y EM+   + P + 
Sbjct: 152 MLRSMNRRVDAFKFKLTLRC------YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIF 205

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T NT+  G  ++  V  A     ++ + G++ DT TYT+ I G C+N  +  A  +F ++
Sbjct: 206 TLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSM 265

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C  +  +Y  LI G C++ R+  A +LF  +      P V TY ++I  LC  G+ 
Sbjct: 266 PNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRK 325

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A ++F +M E    P+V T+ +LI      +      ++L+ M EK ++P     + +
Sbjct: 326 TEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385

Query: 564 VDLLVKNEISLKSL 577
           +D   K  +S  +L
Sbjct: 386 IDGYCKKGLSASAL 399


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 241/459 (52%), Gaps = 10/459 (2%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R+   PN+ TFN+L+ G   + R  +   L   + A G +PNV++YN L+ GLC+     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWH 62

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  L  +M +  G       P+ VTYST++ G CK G V++++ L  ++    + PD +
Sbjct: 63  EAEELVRDMISRGGRS----TPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y  ++  LC +    EA  L  EM+  G  P+++TFN ++   C+ + ++ A  LL  M
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM 178

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              GV+ +  TYNTLMDG C  G++  AE+L   M++ GC  D V+Y+  + G CK+ +V
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTT 422
             A  +  +M      P VVTYNT+  GL +  +++ AL++ ++M   DG   +   Y+T
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            +DGLCK G   EA  +   +    C  D+  Y+ L++GLCK+G+++ A E    +    
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-----EENAAAPDVITFDMLIHGFIRINE 537
             PN VTY  ++ GLC+ G++ +A  +  +M       +   P V T++ LI G  +   
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGR 418

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
                +   +M+ +   PD    S +V+ L ++  +L++
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/417 (34%), Positives = 226/417 (54%), Gaps = 20/417 (4%)

Query: 65  PPVSSFNILLASLAKNKHY--------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P V S+N LL  L K + +        D         P+L TY+ L++ +CK G+V    
Sbjct: 43  PNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESR 102

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                ++     P+A  +  ++  L   +R+ EA  L  ++   GC P +IT+NTLI+G 
Sbjct: 103 ELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGC 162

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR  +  +A +L + MA      GV  K + VTY+T++DGLCK G + +A+ L  +MK  
Sbjct: 163 CREKNLEMADSLLQTMAAS----GV--KADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PDVV Y+S ++GLC +     A ++  +M D    P+VVT+N I+D LCK+ K+D A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA 276

Query: 297 SRLLDLMVQR-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
             +++ M    G   N   Y+T++DG C +G+   A  +  +M   GC+ D V+Y+ L+N
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G CK  ++EEA+   REM  +G KP  VTY +L  GL    ++  A ++ +EM   G   
Sbjct: 337 GLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396

Query: 416 D-----TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           D       TY   I GLCK G I +A++ F+ +R   C+ D  +Y+ +++GL +SGR
Sbjct: 397 DHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 229/456 (50%), Gaps = 14/456 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++ TG  PN  T+N L+N F K GR          +      PN  ++N L++GL    R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 147 IMEAAALFTKLKAFG--CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
             EA  L   + + G    P+++TY+TL++G C+ G    +  L +E+      I    +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEV------ISRGLR 114

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ + Y+ ++  LCK   + +A  L  +M      P ++T+N+LI G C   +   A  L
Sbjct: 115 PDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M   GV+  VVT+N +MD LCK  ++ EA +LL+ M   G  P+   Y++ + G C 
Sbjct: 175 LQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVV 383
            GK+  A ++   M       + V+YN +++G CK+ +++ AL +  +M S  G    VV
Sbjct: 235 SGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y+T+  GL ++ + + A  + + M R G   D  TY++ ++GLCK G I EAVE  R +
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV-----PNVVTYNIMIQGLC 498
            +  C+ +   Y  L+ GLC  GRL  A  +   +  G        P+V TYN +I GLC
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLC 414

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
             G++D A   F  M      PD +++  ++ G  R
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 170/313 (54%), Gaps = 16/313 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +FN L++   + K+ +        + A+G+  ++ TYN L++  CK GR+      
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+  S   P+   ++S + GL    +++ A  +  +++    +PNV+TYNT+++GLC+
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    AL + E+MA+ +G     C  N V YST++DGLCK G   +A+++   M     
Sbjct: 270 SGKIDTALEMMEQMASSDG-----CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGC 324

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVTY+SL++GLC A    EA     EM  +G +P+ VT+  ++  LC   ++ EA R
Sbjct: 325 RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAER 384

Query: 299 LLDLMVQRGVR-----PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           +++ M   G       P+  TYN L+ G C  G+I+ A + F  M S GC  D VSY+ +
Sbjct: 385 MVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI 444

Query: 354 INGYCKNKEVEEA 366
           + G  ++    +A
Sbjct: 445 VEGLARSGRALQA 457



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 144/270 (53%), Gaps = 2/270 (0%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M + G  PN+ T+N L++GF   G+    E L  +M + G + + VSYN L+ G CK + 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 363 VEEALSLYREMVSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             EA  L R+M+S+G +  P +VTY+TL  G  +  +VE + +L  E+   G+  D   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  +  LCK+  + EA+EL   +    C   +  +N LI G C+   L+ A  L  ++  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             +  +VVTYN ++ GLC  G++ +A  L   M+ +  APDV+ +   ++G  +  +   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +++L +M++    P+    + ++D L K+
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/472 (33%), Positives = 245/472 (51%), Gaps = 7/472 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            Y+I+I   CK    +LG      +    + P+ ATF S+I    A+  ++EA  L  ++
Sbjct: 257 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 316

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G   N++   +L+ G C  G+   ALNLF ++     E G+   PN VTYS +I+G 
Sbjct: 317 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT----EDGLF--PNKVTYSVLIEGC 370

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G ++KA  L+ QMK   I P V   NSL+ G   A  W EA +LF E +D GV  ++
Sbjct: 371 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NI 429

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+N++M  LCK  KMDEA  LLD MV +G+ PN  +YN ++ G C  G ++ A  +F  
Sbjct: 430 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 489

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M +   K + V+Y+ILI+G  K  + E+AL L+ +M+S  I PT  T+NT+  GL ++ Q
Sbjct: 490 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 549

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +  A         +G      TY + +DG  K G I  A+ ++R +       ++  Y  
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 609

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+G CKS R+  A +    +    L  +V  Y+ +I G C    M+ A+DLF ++ E  
Sbjct: 610 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 669

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +P+ I ++ +I GF  +N          KM   ++  D    + ++D L+K
Sbjct: 670 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLK 721



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 266/520 (51%), Gaps = 43/520 (8%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           NL     L+  +C  G +      F +I      PN  T++ LI+G      I +A+ L+
Sbjct: 324 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 383

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
           T++K  G  P+V   N+L+ G  +      A  LF+E      + GV    N  TY+ ++
Sbjct: 384 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV----DCGVA---NIFTYNIMM 436

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             LCK G +D+A +L   M ++ + P+VV+YN +I G C   + + A  +F +M+ + ++
Sbjct: 437 SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 496

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+VVT+++++D   K    ++A  L D M+   + P   T+NT+++G C +G+++ A + 
Sbjct: 497 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 556

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
             +    G     ++YN +++G+ K   ++ AL++YREM   G+ P VVTY +L  G  +
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL--------------- 439
            ++++ ALK  DEM+  G+  D   Y+  IDG CK   +  A +L               
Sbjct: 617 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 676

Query: 440 -------FRTLRILKCEL-------------DIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
                  FR L  ++  L             D+  Y  LIDGL K GRL FA +L+  + 
Sbjct: 677 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 736

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              +VP+++T+++++ GLCN GQ++ AR +  +M+     P V+ ++ LI G+ R     
Sbjct: 737 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 796

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           +   L  +M ++ ++PD     I+++   K + SL S PS
Sbjct: 797 EAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL-SRPS 835



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 246/480 (51%), Gaps = 40/480 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG----- 140
           ++   GLFPN  TY++LI   C  G +      + ++  +   P+    NSL++G     
Sbjct: 350 KITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAP 409

Query: 141 -----------------------------LHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
                                        L    ++ EA +L   +   G  PNV++YN 
Sbjct: 410 LWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 469

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I G CR G+  +A ++F +M      +    KPN VTYS +IDG  K+G  +KA  LF 
Sbjct: 470 MILGHCRKGNMDMASSVFSDM------LARDLKPNVVTYSILIDGNFKKGDSEKALDLFD 523

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM   NI P   T+N++I+GLC     +EA+      +++G  PS +T+N I+D   K  
Sbjct: 524 QMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 583

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +D A  +   M + GV PN  TY +L++GFC   +I+ A +    M   G + D  +Y+
Sbjct: 584 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 643

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+G+CK +++E A  L+ E++  G+ P  + YN++  G  +++ +E AL  + +M  D
Sbjct: 644 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 703

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            +  D  TYTT IDGL K G ++ A +L+  +       DI  ++ L++GLC  G+L+ A
Sbjct: 704 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 763

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++   +    + P+V+ YN +I G   +G + +A  L  +M +    PD +T+D+LI+G
Sbjct: 764 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 197/391 (50%), Gaps = 19/391 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  + D M+      P V S+N ++    +  + D      + + A  L PN+ TY+I
Sbjct: 446 DEACSLLDNMVN-QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 504

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF- 160
           LI+   K G        F ++L     P   TFN++I GL    ++ EA     KLK F 
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR---DKLKNFL 561

Query: 161 --GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P+ +TYN++++G  + G+   AL ++ EM     E GV   PN VTY+++I+G C
Sbjct: 562 EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC----EFGV--SPNVVTYTSLINGFC 615

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   +D A     +M+++ +  DV  Y++LI G C   D   A+ LF E+++ G+ P+ +
Sbjct: 616 KSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRI 675

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +N ++        M+ A      M+   +  +  TY TL+DG    G++  A +L+  M
Sbjct: 676 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 735

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            S G   D +++++L+NG C   ++E A  +  EM  K + P+V+ YNTL  G F    +
Sbjct: 736 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 795

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           + A  L DEM   G+  D  TY   I+G  K
Sbjct: 796 KEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 202/443 (45%), Gaps = 7/443 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  +   FN L+      +RI  A   F  +      P V   N L+  L R        
Sbjct: 146 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 205

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L+ +M    G  G     +  T   ++    KEG V++A+  F + K+  +  D   Y+
Sbjct: 206 DLYNKMV-LRGIYG-----DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYS 259

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            +I  +C   + N    L  EM ++G  PS  TF  ++        M EA RL + M+  
Sbjct: 260 IIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINC 319

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G   N     +LM G+C  G ++ A  LF  +   G   + V+Y++LI G C +  +E+A
Sbjct: 320 GKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 379

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             LY +M   GI P+V   N+L  G  +    E A KLFDE    GV A+  TY   +  
Sbjct: 380 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSW 438

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G + EA  L   +       ++ +YN +I G C+ G +  A  +F  +    L PN
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 498

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTY+I+I G    G  +KA DLF  M     AP   TF+ +I+G  ++ + S+  + L 
Sbjct: 499 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 558

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
              E+  +P     + +VD  +K
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIK 581



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 159/374 (42%), Gaps = 34/374 (9%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D   +N L++    AN    A   F  M+ Q V P V   N+++  L +   + E   L 
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + MV RG+  +  T + ++      G++  AEE F   +  G K D  +Y+I+I   CK 
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
                 L L  EM  +G  P+  T+ ++ +       +  AL+L +EM   G   +    
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC---- 476
           T+ + G C  G +  A+ LF  +       +   Y+ LI+G C SG ++ A EL+     
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 388

Query: 477 -----------SLPHGVL-------------------VPNVVTYNIMIQGLCNDGQMDKA 506
                      SL  G L                   V N+ TYNIM+  LC  G+MD+A
Sbjct: 389 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEA 448

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M      P+V++++ +I G  R       + +   M  + + P+    SI++D 
Sbjct: 449 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508

Query: 567 LVKNEISLKSLPSF 580
             K   S K+L  F
Sbjct: 509 NFKKGDSEKALDLF 522



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 130/340 (38%), Gaps = 57/340 (16%)

Query: 252 LCHANDWNEAKRLFIEMMDQ-----GV--------------------------------Q 274
           LCH ND   A R F     Q     GV                                 
Sbjct: 68  LCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSD 127

Query: 275 PSVVTF--------------------NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           PS V F                    N +++   +  +++ A    + M+ + V P    
Sbjct: 128 PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPY 187

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
            N L+        I    +L+  M   G   D  + ++++    K   VEEA   +RE  
Sbjct: 188 MNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETK 247

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            +G+K     Y+ +   + +       L+L +EM+  G      T+T+ I      G ++
Sbjct: 248 ERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 307

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EA+ L   +      +++     L+ G C  G L  A  LF  +    L PN VTY+++I
Sbjct: 308 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           +G CN G ++KA +L+  M+ N   P V   + L+ G+++
Sbjct: 368 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 16/179 (8%)

Query: 3   LESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHP 62
           +ES  +  F      +S  R  ++S++  FRDL   E          A   +  M+    
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEA---------ALVWYKKMIN-DR 704

Query: 63  SPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
            P  + ++  L+  L K             + + G+ P++ T+++L+N  C  G++    
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 764

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                + R   TP+   +N+LI G   E  + EA  L  ++   G  P+ +TY+ LING
Sbjct: 765 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 281/542 (51%), Gaps = 20/542 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNIL 102
           +A  +FD MLR     P V++FN +L +L +      +     ++   G+  N +T NI 
Sbjct: 98  DARHLFDEMLR-RDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIW 156

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C+ GR+    +A    + +   P+  T+N+L++GL  +S++ EAA    ++   GC
Sbjct: 157 IRGLCEGGRLEEA-VALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  TYNT+I+G C+      A  L ++ A   G +     P+ VTY ++I+GLC EG 
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKD-AIFKGFV-----PDRVTYCSLINGLCAEGD 269

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V++A  LF + + +++ PD+V YNSL+ GLC       A ++  EM++ G  P + T+N+
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LCK   + +A+ +++  + +G  P+  T+NT++DG+C   K++ A +L   M   G
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++YN ++NG CK  + +E    + EM+ KG +P  +TYN L     +I+Q+E A 
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +   M +DG+  DT ++ T I G C+NG +  A  LF+ L           +N LI   
Sbjct: 450 GVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 509

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
                ++ A ++F  +      P++ TY +++ G C    +D+A     +M      P +
Sbjct: 510 SSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSM 569

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
            TF  +++     +  S+   ++H M    V+P+      VVD ++  +    + P  LV
Sbjct: 570 ATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE------VVDTILSTDKKEIAAPKILV 623

Query: 583 QE 584
           +E
Sbjct: 624 EE 625



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 234/466 (50%), Gaps = 7/466 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P    YN +++              + R+L +   P+A T    IK      R   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   L   GC+   + Y T++ GL   GH   A +LF+EM   +        P+  T+
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRD------VFPDVATF 118

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++  LC++G + ++ AL  ++    ++ +  T N  I GLC      EA  L +E MD
Sbjct: 119 NNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL-VESMD 177

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             + P VVT+N +M  LCK+ K+ EA++ L  M+ +G  P+  TYNT++DG+C    +  
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A EL       G   D V+Y  LING C   +VE AL L+ E  +K +KP +V YN+L  
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL     + HAL++ +EM  DG   D  TY   I+GLCK G I +A  +     +     
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP 357

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  +N +IDG CK  +L  A +L   +    + P+ +TYN ++ GLC  G+  +  + F
Sbjct: 358 DVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETF 417

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            +M      P+ IT+++LI  F +IN+  + + ++ +M +  ++PD
Sbjct: 418 EEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPD 463



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 214/441 (48%), Gaps = 42/441 (9%)

Query: 160 FGCEPNVITYNTLINGL-----------------------------------CRTGHTMI 184
           FGC P    YN +++ L                                   C TG   +
Sbjct: 4   FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHV 63

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL L   +     E G   KP  + Y T++ GL   G    A+ LF +M   ++ PDV T
Sbjct: 64  ALRLLRSLP----ERGCDVKP--LAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N+++H LC   D  E+  L  +++ +G+  +  T N+ +  LC+  +++EA  L++ M 
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM- 176

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
              + P+  TYNTLM G C   K+  A +    M + GC  DD +YN +I+GYCK   ++
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA  L ++ + KG  P  VTY +L  GL     VE AL+LF+E Q   +  D   Y + +
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GLC+ G I+ A+++   +    C  DI  YN +I+GLCK G +  A  +         +
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V T+N MI G C   ++D A  L   M     APD IT++ +++G  +  +  +VNE 
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416

Query: 545 LHKMKEKKVMPDASIVSIVVD 565
             +M  K   P+A   +I+++
Sbjct: 417 FEEMILKGCRPNAITYNILIE 437



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 148/306 (48%), Gaps = 1/306 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P+   +N IMD L      D+A ++   M+  GV P+A T+   +  FC+ G+ + A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L  S+   GC    ++Y  ++ G   +    +A  L+ EM+ + + P V T+N +   
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +   +  +  L  ++ + G++ +  T   +I GLC+ G + EAV L  ++       D
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP-D 183

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN L+ GLCK  +++ A +    + +   +P+  TYN +I G C    + +A +L  
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           D       PD +T+  LI+G     +  +  EL ++ + K + PD  + + +V  L +  
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 572 ISLKSL 577
           + L +L
Sbjct: 304 LILHAL 309



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 40/256 (15%)

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT------------- 384
           M+  GC     +YN +++        ++A  +Y  M+S G+ P   T             
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 385 ----------------------YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
                                 Y T+  GL+       A  LFDEM R  V  D  T+  
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--LIDGLCKSGRLKFAWELFCSLPH 480
            +  LC+ G I+E+  L    ++LK  + +  + C   I GLC+ GRL+ A  L  S+  
Sbjct: 121 VLHALCQKGDIMESGALLA--KVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-D 177

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+VVTYN +++GLC D ++ +A      M      PD  T++ +I G+ + +   +
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 541 VNELLHKMKEKKVMPD 556
             ELL     K  +PD
Sbjct: 238 ATELLKDAIFKGFVPD 253


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 263/494 (53%), Gaps = 8/494 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAAL 153
           N   +++LI  + +  ++  G  AF RILRS  +  +    NSL+ GL     +  A  +
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAF-RILRSKGYLVSINACNSLLGGLVKIDWVELAWEV 105

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   G E NV T N ++N LC+ G      +   EM  GNG        + VTY+T+
Sbjct: 106 HREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEM-EGNG-----IYADMVTYNTL 159

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I   C+EG +++A  +   M D+ + P + TYN++I+GLC    +  AK + IEM++ G+
Sbjct: 160 IGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P   T+N ++ E C+     EA  +   M+++GV P+  ++++L+  F     +++A  
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            F  M+  G   D+V Y +L++GYC+N  + EAL +  EM+ +G    V+ YNT+  GL 
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   +  A KLFDEM   G   D  T+TT I G C++G + +A+ LF T+     + DI 
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           AYN LIDG CK G ++ A EL+  +    + PN +TY I+I   C+ G + +A  L+  M
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
            E    P ++T + +I G+ R  + SK +E L +M  K V PD    + +++  V+ +  
Sbjct: 460 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM 519

Query: 574 LKSLPSFLVQERQG 587
            K+       E++G
Sbjct: 520 DKAFLWINKMEKEG 533



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/496 (30%), Positives = 250/496 (50%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L K+  +D      + +   G++ ++ TYN LI  +C+ G +   F    
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  T+N++I GL  + R   A  +  ++   G  P+  TYNTL+   CR  
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +   A  +F EM       GVV  P+ V++S++I    +   +D+A   F  MK   + P
Sbjct: 238 NFSEAKEIFGEMLRQ----GVV--PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVP 291

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  L+HG C   +  EA ++  EM++QG    V+ +N I++ LCK + + +A +L 
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D MV+RG  P+  T+ TL+ G C  G + +A  LFG+M     K D V+YN LI+G+CK 
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKV 411

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+E+A  L+  M+S+ I P  +TY  L      +  V  A +L+D M   G+     T 
Sbjct: 412 GEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTC 471

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I G C++G   +A E    +       D  +YN LI+G  +   +  A+     +  
Sbjct: 472 NTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK 531

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L+P+++TYN+++ G C  G+M +A  +   M E    PD  T+  LI+G +  +  ++
Sbjct: 532 EGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNE 591

Query: 541 VNELLHKMKEKKVMPD 556
                 +M ++   PD
Sbjct: 592 AFRFHDEMLQRGFAPD 607



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/517 (29%), Positives = 262/517 (50%), Gaps = 24/517 (4%)

Query: 53  IFDYMLRMHPSPPPV----SSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
           +FD ++R +     +     +F IL     ++K Y   +NA          N L+    K
Sbjct: 50  VFDLLIRTYVQARKLREGTEAFRIL-----RSKGYLVSINAC---------NSLLGGLVK 95

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           I  V L +     ++RS    N  T N ++  L  + +  +  +  ++++  G   +++T
Sbjct: 96  IDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVT 155

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YNTLI   CR G    A  +   MA+         KP+  TY+ II+GLCK+G   +AK 
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKG------LKPSLFTYNAIINGLCKKGRYARAKG 209

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           + ++M +  ++PD  TYN+L+   C  ++++EAK +F EM+ QGV P +V+F+ ++    
Sbjct: 210 ILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFS 269

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +NR +D+A      M + G+ P+   Y  LM G+C  G +  A ++   M   GC  D +
Sbjct: 270 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 329

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN ++NG CK K + +A  L+ EMV +G  P   T+ TL  G  +   +  AL LF  M
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            +  +  D   Y T IDG CK G + +A EL+  +   K   +   Y  LI+  C  G +
Sbjct: 390 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 449

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+ L+  +    + P +VT N +I+G C  G   KA +    M     APD I+++ L
Sbjct: 450 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           I+GF+R +   K    ++KM+++ ++PD    ++V++
Sbjct: 510 INGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMN 546



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 197/375 (52%), Gaps = 13/375 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNI 101
           +EA  IF  MLR    P  VS F+ L+A  ++N+H D  L         GL P+   Y +
Sbjct: 240 SEAKEIFGEMLRQGVVPDLVS-FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ +C+ G +         +L      +   +N+++ GL  E  + +A  LF ++   G
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+  T+ TLI+G C+ G+   AL+LF  M   N       KP+ V Y+T+IDG CK G
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN------IKPDIVAYNTLIDGFCKVG 412

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++KA  L+  M    I P+ +TY  LI+  C     +EA RL+  M+++G++P++VT N
Sbjct: 413 EMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCN 472

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   C++    +A   L  M+ +GV P+  +YNTL++GF     +++A      ME  
Sbjct: 473 TVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKE 532

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D ++YN+++NG+C+   ++EA  + R+M+ KGI P   TY  L  G      +  A
Sbjct: 533 GLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEA 592

Query: 402 LKLFDEMQRDGVAAD 416
            +  DEM + G A D
Sbjct: 593 FRFHDEMLQRGFAPD 607



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 151/307 (49%), Gaps = 15/307 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNI 101
           EA  I D ML        V ++N +L  L K       +K +D  +   G  P+ YT+  
Sbjct: 311 EALKIRDEMLE-QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE-RGALPDFYTFTT 368

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  C+ G ++     FG + +    P+   +N+LI G      + +A+ L+  + +  
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN ITY  LIN  C  GH   A  L++ M     E G+  KP  VT +T+I G C+ G
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMI----EKGI--KPTLVTCNTVIKGYCRSG 482

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              KA     +M  + + PD ++YN+LI+G    ++ ++A     +M  +G+ P ++T+N
Sbjct: 483 DSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYN 542

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V+M+  C+  +M EA  +L  M+++G+ P+  TY  L++G      +N A      M   
Sbjct: 543 VVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602

Query: 342 GCKHDDV 348
           G   DDV
Sbjct: 603 GFAPDDV 609



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 157/364 (43%), Gaps = 35/364 (9%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           N   + + ++ LI     A    E    F  +  +G   S+   N ++  L K   ++ A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +   +V+ G+  N  T N +++  C  GK +  +     ME  G   D V+YN LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL------------------------ 392
           YC+   +EEA  +   M  KG+KP++ TYN +  GL                        
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 393 ---FEIHQVE--------HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
              +    VE         A ++F EM R GV  D  ++++ I    +N ++ +A+  FR
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            ++      D   Y  L+ G C++G +  A ++   +     V +V+ YN ++ GLC + 
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +  A  LF +M E  A PD  TF  LIHG  +    +K   L   M ++ + PD    +
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 402

Query: 562 IVVD 565
            ++D
Sbjct: 403 TLID 406



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 19/302 (6%)

Query: 289 KNRKMDEASRLLDLMVQR-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           ++R++ +A  L+  M++R GV                  ++   E L  SM    C  ++
Sbjct: 7   RSRRLSDAQALILRMIRRSGV-----------------SRVEVVEALVSSM-CGNCGTNN 48

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           + +++LI  Y + +++ E    +R + SKG   ++   N+L  GL +I  VE A ++  E
Sbjct: 49  LVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE 108

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           + R G+  +  T    ++ LCK+G   +       +       D+  YN LI   C+ G 
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L+ A+E+  S+    L P++ TYN +I GLC  G+  +A+ + ++M     +PD  T++ 
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           L+    R +  S+  E+  +M  + V+PD    S ++ +  +N    ++L  F   ++ G
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288

Query: 588 EV 589
            V
Sbjct: 289 LV 290


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 166/487 (34%), Positives = 252/487 (51%), Gaps = 19/487 (3%)

Query: 69  SFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           S N LL  LAK          Y   LN +G+ P+L T+N LIN   K G+V    +   +
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLN-SGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           I +   +P+  T+ SLI G H  +R ++ A  +F ++   GC+PN +TY+TLINGLC  G
Sbjct: 224 IFQYDLSPDVFTYTSLILG-HCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 282

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               AL++ EEM     E G+  +P   TY+  I  LC     ++A  L  +MK     P
Sbjct: 283 RVDEALDMLEEMI----EKGI--EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP 336

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +V TY +LI GL        A  L+ +M+ +G+ P+ VT+N +++ELC   +   A ++ 
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M   G   N  TYN ++ G CL G I +A  LF  M  MG     V+YN LINGY   
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             V  A  L   M   G +P   TYN L  G  +  ++E A   F EM   G+  +  +Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  IDG  K+G +  A+ L + +  + C  ++++YN +I+GL K  R   A ++   +  
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI---RINE 537
             L+PNV+TY  +I GLC +G+   A  +F DME+    P++ T+  LI+G     + +E
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 538 PSKVNEL 544
             +++E+
Sbjct: 637 AERMSEI 643



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 177/570 (31%), Positives = 268/570 (47%), Gaps = 52/570 (9%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILI 103
           AF +FD M++    P  V+ ++ L+  L      D  L+        G+ P +YTY + I
Sbjct: 252 AFGVFDRMVKEGCDPNSVT-YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
              C I           R+ +    PN  T+ +LI GL    ++  A  L+ K+   G  
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN +TYN LIN LC  G    AL +F  M  G+G +      NT TY+ II GLC  G +
Sbjct: 371 PNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQTYNEIIKGLCLGGDI 424

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           +KA  LF +M      P VVTYN+LI+G     + N A RL   M + G +P   T+N +
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +    K  K++ AS     MV+ G+ PN  +Y  L+DG    GK++ A  L   ME MGC
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +  SYN +ING  K     EA  +  +MV +G+ P V+TY TL  GL    + + A K
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F +M++     +  TY++ I GLC+ G   EA  +      + CE  +  Y+ L+ GLC
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSE----IGCEPTLDTYSTLVSGLC 660

Query: 464 KSGRLKFAWEL--------FC---SLPHGVLVPN------------------------VV 488
           + GR   A +L        FC    + + +L+ +                        + 
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            Y  +I  LC  GQ+++A+ LF +M E     D I + +L+ G ++  E     +LLH M
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
           + K   P+     I+   L +   S++S P
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIESEP 810



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 253/508 (49%), Gaps = 17/508 (3%)

Query: 66  PVSSFNILLASLAKNKHYDTR-------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P     IL+    +N+    R       ++  G   +LY+ N L+    K   V      
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           + ++L S   P+  TFN+LI  L  + ++ EA  + +++  +   P+V TY +LI G CR
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             +  +A  +F+ M          C PN+VTYST+I+GLC EG VD+A  +  +M ++ I
Sbjct: 246 NRNLDLAFGVFDRMVKEG------CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P V TY   I  LC      EA  L   M  +G +P+V T+  ++  L +  K++ A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M++ G+ PN  TYN L++  C+ G+ + A ++F  ME  G   +  +YN +I G C
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLC 419

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++E+A+ L+ +M+  G  PTVVTYNTL  G      V +A +L D M+ +G   D  
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ--AYNCLIDGLCKSGRLKFAWELFC 476
           TY   + G  K G +  A   F+   +++C L+    +Y  LIDG  K G++  A  L  
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQ--EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +      PNV +YN +I GL  + +  +A  +   M E    P+VIT+  LI G  R  
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVV 564
                 ++ H M+++K +P+    S ++
Sbjct: 598 RTQFAFKIFHDMEKRKCLPNLYTYSSLI 625



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/491 (30%), Positives = 242/491 (49%), Gaps = 16/491 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L++ L++    +       ++   GL PN  TYN LIN  C  GR S     
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +       N  T+N +IKGL     I +A  LF K+   G  P V+TYNTLING   
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A  L + M   NG     C+P+  TY+ ++ G  K G ++ A   F +M +  +
Sbjct: 456 KGNVNNAARLLDLMKE-NG-----CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NP+ V+Y +LI G       + A  L   M + G  P+V ++N +++ L K  +  EA +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + D MV++G+ PN  TY TL+DG C  G+   A ++F  ME   C  +  +Y+ LI G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  + +EA      M   G +PT+ TY+TL  GL    +   A +L  +M+  G   D  
Sbjct: 630 QEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y + +   CKN  +  A+++F ++     +L +  Y  LI  LCK+G+++ A  LF ++
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 745

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  + + + +++ GL  +G++D    L   ME     P++ T+ +L     RI + 
Sbjct: 746 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKS 805

Query: 539 SKVNELLHKMK 549
            +   L  K+K
Sbjct: 806 IESEPLADKLK 816



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 229/454 (50%), Gaps = 14/454 (3%)

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           + FG  L SC        N+L+  L     +  A  L+ ++   G +P+++T+NTLIN L
Sbjct: 157 MGFGFSLYSC--------NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINIL 208

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G    A  +  ++   +        P+  TY+++I G C+   +D A  +F +M  E
Sbjct: 209 SKKGKVREAELILSQIFQYD------LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 262

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             +P+ VTY++LI+GLC+    +EA  +  EM+++G++P+V T+ + +  LC     +EA
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L+  M +RG RPN  TY  L+ G   +GK+  A  L+  M   G   + V+YN LIN 
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C       AL ++  M   G      TYN +  GL     +E A+ LF++M + G    
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPT 442

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY T I+G    G +  A  L   ++   CE D   YN L+ G  K G+L+ A   F 
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L PN V+Y  +I G   DG++D A  L   MEE    P+V +++ +I+G  + N
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             S+  ++  KM E+ ++P+    + ++D L +N
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRN 596



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 211/413 (51%), Gaps = 20/413 (4%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDTRL----NATGLFP 94
           GDI      +A  +F+ ML+M P P  V+   ++   L K N +   RL       G  P
Sbjct: 422 GDIE-----KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEP 476

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           + +TYN L++ F K G++      F  ++     PN  ++ +LI G   + ++  A +L 
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            +++  GC PNV +YN +INGL +      A  + ++M     E G++  PN +TY+T+I
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV----EQGLL--PNVITYTTLI 590

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           DGLC+ G    A  +F  M+     P++ TY+SLI+GLC     +EA+R    M + G +
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCE 646

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P++ T++ ++  LC+  +  EA +L+  M +RG  P+   Y +L+   C   +++ A ++
Sbjct: 647 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 706

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F S+E+ G +     Y  LI   CK  +VEEA +L+  M+ K      + +  L  GL +
Sbjct: 707 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
             +++  +KL   M+      + +TY      L + G  IE+  L   L++LK
Sbjct: 767 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLK 819



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 123/241 (51%)

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I R  +    +  MG      S N L+    K + VE A +LY++M++ GI+P+++T+N
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL   L +  +V  A  +  ++ +  ++ D  TYT+ I G C+N  +  A  +F  +   
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE 262

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C+ +   Y+ LI+GLC  GR+  A ++   +    + P V TY + I  LC     ++A
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +L   M++    P+V T+  LI G  R+ +      L HKM ++ ++P+    + +++ 
Sbjct: 323 IELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINE 382

Query: 567 L 567
           L
Sbjct: 383 L 383


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 149/449 (33%), Positives = 231/449 (51%), Gaps = 9/449 (2%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL--KAFGCEPNVITYNTLINGL 176
           +  +L+    P+  T+N+L+       R+ +A AL   +  +A GC PN +TYN +INGL
Sbjct: 217 YSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGL 276

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            R G    A  L + M           K +  TY+ +I GL    FV+KA AL L+M++E
Sbjct: 277 ARKGELEKAAQLVDIMRLSK-------KASAFTYNPLITGLLARDFVEKAGALLLEMENE 329

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I P VVTYN+LI GL    +   A+  F EM  +G+ P ++T+N +++  CK   + +A
Sbjct: 330 GIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQA 389

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   + + G+ P   TYN L+DG+C +G +  A  L   M    C  D  +Y IL+NG
Sbjct: 390 LCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNG 449

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C  + +      + EM+SKG++P    YNT       I  + +A +L +EM   G+++D
Sbjct: 450 SCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSD 509

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           T TY   IDGLCK G + +A  L+  +      LD   Y CLI   C+ GRL  A  +F 
Sbjct: 510 TVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFD 569

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L P+VVTY I I   C  G +  A   F  M E    P+ +T+++L+H   R+ 
Sbjct: 570 GMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMG 629

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                 +  H+M E+ ++P+    ++++D
Sbjct: 630 RTESAYQHFHEMLERGLVPNKYTYTLLID 658



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 157/476 (32%), Positives = 238/476 (50%), Gaps = 15/476 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL--------NATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P + ++N LL S  K    D  +         A G  PN  TYN++IN   + G +    
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKA- 285

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                I+R     +A T+N LI GL A   + +A AL  +++  G  P V+TYNTLI+GL
Sbjct: 286 AQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            +TG+   A   F+EM    G +     P+ +TY+++I+G CK G + +A  LF  +K  
Sbjct: 346 FKTGNAEAAQVKFDEM-RAKGLL-----PDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + P V+TYN LI G C   D   A+RL  EM ++   P V T+ ++M+  C  R +   
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
               D M+ +G+ P+   YNT +     +G I  A +L   M   G   D V+YN+LI+G
Sbjct: 460 RIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDG 519

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK   +++A  L+ +MV+ G++   VTY  L     E  ++  A  +FD M   G++  
Sbjct: 520 LCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPS 579

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT FI   C+ G +  A   FR +     E +   YN L+  LC+ GR + A++ F 
Sbjct: 580 VVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFH 639

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            +    LVPN  TY ++I G C +G    A  L+ +M +    PD  T + L  GF
Sbjct: 640 EMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 248/511 (48%), Gaps = 16/511 (3%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFC 107
           F  M R H   P V   N +L  L     +D      + +   G+ P+++TYN L++ FC
Sbjct: 182 FQEMAR-HGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFC 240

Query: 108 KIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           K GR+  ++  +       +   PN  T+N +I GL A    +E AA    +     + +
Sbjct: 241 KAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGL-ARKGELEKAAQLVDIMRLSKKAS 299

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
             TYN LI GL        A  L  EM N     G+V  P  VTY+T+IDGL K G  + 
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENE----GIV--PTVVTYNTLIDGLFKTGNAEA 353

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A+  F +M+ + + PD++TYNSLI+G C A +  +A  LF ++   G+ P+V+T+N+++D
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             C+   ++ A RL + M +    P+ CTY  LM+G C++  +      F  M S G + 
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D  +YN  I+       +  A  L  EM+ +GI    VTYN L  GL +   ++ A  L+
Sbjct: 474 DCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLW 533

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            +M  DG+  D  TYT  I   C+ G +IEA  +F  +        +  Y   I   C+ 
Sbjct: 534 MKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRR 593

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G L  A+  F  +    + PN VTYN+++  LC  G+ + A   F +M E    P+  T+
Sbjct: 594 GNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTY 653

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            +LI G  +         L  +M +K + PD
Sbjct: 654 TLLIDGSCKEGNWVHAIRLYCEMHQKGIHPD 684



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 170/370 (45%), Gaps = 35/370 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L K  + +        + A GL P+L TYN LIN +CK G +      
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG + R+   P   T+N LI G      +  A  L  ++    C P+V TY  L+NG C 
Sbjct: 393 FGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCM 452

Query: 179 TGHTMIALNLFEEMANGNGE---------------IGVVC--------------KPNTVT 209
             +  +    F+EM +   E               IG +                 +TVT
Sbjct: 453 VRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVT 512

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +IDGLCK G +  A  L+++M  + +  D VTY  LIH  C      EAK +F  M+
Sbjct: 513 YNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMV 572

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+ PSVVT+ + +   C+   +  A      M++ GV PN  TYN LM   C MG+  
Sbjct: 573 ASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTE 632

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A + F  M   G   +  +Y +LI+G CK      A+ LY EM  KGI P   T+N LF
Sbjct: 633 SAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALF 692

Query: 390 LGLFEIHQVE 399
            G  E H  +
Sbjct: 693 KGFGEGHMYD 702



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 3/343 (0%)

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           F +M    + P V   N ++  L  A  W++ + ++ +M+  GV+PS+ T+N ++D  CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 290 NRKMDEASRLLDLMVQR--GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
             +MD+A  LL  M  R  G  PN  TYN +++G    G++ +A +L   M  +  K   
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASA 300

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            +YN LI G      VE+A +L  EM ++GI PTVVTYNTL  GLF+    E A   FDE
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+  G+  D  TY + I+G CK G + +A+ LF  L+       +  YN LIDG C+ G 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L+ A  L   +     +P+V TY I++ G C    +   R  F +M      PD   ++ 
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            I   + I   +   +L  +M  + +  D    ++++D L K 
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKT 523



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 6/209 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  +  TYN+LI+  CK G +   ++ + +++      +  T+  LI       R++EA
Sbjct: 505 GISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEA 564

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F  + A G  P+V+TY   I+  CR G+  +A   F +M     E GV  +PN VTY
Sbjct: 565 KNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKML----EEGV--EPNEVTY 618

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++  LC+ G  + A   F +M +  + P+  TY  LI G C   +W  A RL+ EM  
Sbjct: 619 NVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQ 678

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           +G+ P   T N +     +    D    L
Sbjct: 679 KGIHPDHCTHNALFKGFGEGHMYDAVQYL 707



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 3/194 (1%)

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           + LS ++EM   G+ P V   N +   L +  + +    ++ +M + GV     TY T +
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 425 DGLCKNGYIIEAVELFRTL--RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           D  CK G + +AV L + +  R   C  +   YN +I+GL + G L+ A +L   +    
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLS 295

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
              +  TYN +I GL     ++KA  L L+ME     P V+T++ LI G  +        
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 543 ELLHKMKEKKVMPD 556
               +M+ K ++PD
Sbjct: 356 VKFDEMRAKGLLPD 369



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 3/140 (2%)

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           ++  NC++  L  + R      ++  +    + P++ TYN ++   C  G+MD+A  L  
Sbjct: 194 VKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLK 253

Query: 512 DMEENAAA--PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           DME  AA   P+ +T++++I+G  R  E  K  +L+  M+  K     +   ++  LL +
Sbjct: 254 DMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLAR 313

Query: 570 NEISLKSLPSFLVQERQGEV 589
           + +  K+    L  E +G V
Sbjct: 314 DFVE-KAGALLLEMENEGIV 332


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 249/509 (48%), Gaps = 12/509 (2%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + ++N+L+  L K             L   GL  ++ TY  L+  FC++ +   G     
Sbjct: 260 IVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD 319

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++   F+P  A  + L+ GL  + +I +A  L  K+  FG  PN+  YN LIN LC+ G
Sbjct: 320 EMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGG 379

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L+  M+  N       +PN +TYS +ID  C+ G +D A + F +M  + I  
Sbjct: 380 DLDKAELLYSNMSLMN------LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGE 433

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V  YNSLI+G C   D + A+ LFIEM ++GV+P+  TF  ++   CK+ ++ +A +L 
Sbjct: 434 TVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLY 493

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M+  G+ PN  T+  L+ G C   K+  A ELF  +     K  +V+YN+LI GYC++
Sbjct: 494 NKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRD 553

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++++A  L  +M  KG+ P   TY  L  GL    +V  A    D++ +  V  +   Y
Sbjct: 554 GKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCY 613

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  + G C+ G ++EA+     +      +D+  +  LIDG  K    K  ++L   +  
Sbjct: 614 SALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHD 673

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+ V Y  MI     +G   KA + +  M      P+V+T+  L++G  +  E  +
Sbjct: 674 QGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDR 733

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              L  +M+   V P++      +D L K
Sbjct: 734 AGLLFKRMQAANVPPNSITYGCFLDNLTK 762



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 263/518 (50%), Gaps = 14/518 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           + D M+ +  SP   ++ + L+  L K    D       ++   G  PNL+ YN LIN  
Sbjct: 317 LMDEMVELGFSPTE-AAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK G +    + +  +      PN  T++ LI       R+  A + F ++   G    V
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETV 435

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
             YN+LING C+ G    A +LF EM N   E      P   T++++I G CK+  V KA
Sbjct: 436 YAYNSLINGQCKFGDLSAAESLFIEMTNKGVE------PTATTFTSLISGYCKDLQVQKA 489

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L+ +M D  I P+V T+ +LI GLC  N   EA  LF E++++ ++P+ VT+NV+++ 
Sbjct: 490 FKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEG 549

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            C++ K+D+A  LL+ M Q+G+ P+  TY  L+ G C  G++++A++    +     K +
Sbjct: 550 YCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN 609

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           ++ Y+ L++GYC+   + EALS   EM+ +GI   +V +  L  G  +    +    L  
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   G+  D   YT+ ID   K G   +A E +  +   +C  ++  Y  L++GLCK+G
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAG 729

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            +  A  LF  +    + PN +TY   +  L  +G M +A  L   M +   A + +T +
Sbjct: 730 EMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLA-NTVTHN 788

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++I GF ++    +  ++L +M E  + PD    S ++
Sbjct: 789 IIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLI 826



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 255/512 (49%), Gaps = 14/512 (2%)

Query: 65  PPVSSFNILLASLAKNKHY-------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V + + LL  L K + +       D  +NA G+ P+ YT + ++   C++        
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNA-GVRPDPYTCSAVVRSMCELKDFLRAKE 246

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +  + F  +  T+N LI GL    R+ EA  +   L   G   +V+TY TL+ G C
Sbjct: 247 KIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC 306

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R       + L +EM     E+G    P     S ++DGL K+G +D A  L +++    
Sbjct: 307 RLQQFEAGIQLMDEMV----ELGF--SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P++  YN+LI+ LC   D ++A+ L+  M    ++P+ +T+++++D  C++ ++D A 
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
              D M+Q G+      YN+L++G C  G ++ AE LF  M + G +    ++  LI+GY
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+ +V++A  LY +M+  GI P V T+  L  GL   +++  A +LFDE+    +    
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   I+G C++G I +A EL   +       D   Y  LI GLC +GR+  A +    
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L    +  N + Y+ ++ G C +G++ +A     +M +     D++   +LI G ++  +
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD 660

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                +LL  M ++ + PD  I + ++D   K
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSK 692



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 248/516 (48%), Gaps = 16/516 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  ++  M  M+  P  ++ ++IL+ S  ++   D       R+   G+   +Y YN 
Sbjct: 382 DKAELLYSNMSLMNLRPNGIT-YSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN  CK G +S     F  +      P A TF SLI G   + ++ +A  L+ K+   G
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV T+  LI+GLC T     A  LF+E+           KP  VTY+ +I+G C++G
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERK------IKPTEVTYNVLIEGYCRDG 554

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +DKA  L   M  + + PD  TY  LI GLC     ++AK    ++  Q V+ + + ++
Sbjct: 555 KIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYS 614

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   C+  ++ EA      M+QRG+  +   +  L+DG           +L   M   
Sbjct: 615 ALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQ 674

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + D+V Y  +I+ Y K    ++A   +  MV++   P VVTY  L  GL +  +++ A
Sbjct: 675 GLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRA 734

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQAYNCLID 460
             LF  MQ   V  ++ TY  F+D L K G + EA+ L   +  LK  L +   +N +I 
Sbjct: 735 GLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAM--LKGLLANTVTHNIIIR 792

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G CK GR   A ++   +    + P+ VTY+ +I   C  G +  +  L+  M      P
Sbjct: 793 GFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEP 852

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           D++ +++LI+G     E  K  EL   M  + ++PD
Sbjct: 853 DLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 225/444 (50%), Gaps = 6/444 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A  L P + T + L+N   K+ +    +  F   + +   P+  T +++++ +      +
Sbjct: 183 ANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFL 242

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A      ++A G + +++TYN LI+GLC+      A+    E+    G  G+    + V
Sbjct: 243 RAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAV----EVKRSLGGKGLA--ADVV 296

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY T++ G C+    +    L  +M +   +P     + L+ GL      ++A  L +++
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV 356

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G  P++  +N +++ LCK   +D+A  L   M    +RPN  TY+ L+D FC  G++
Sbjct: 357 GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRL 416

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A   F  M   G      +YN LING CK  ++  A SL+ EM +KG++PT  T+ +L
Sbjct: 417 DVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSL 476

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +  QV+ A KL+++M  +G+  +  T+T  I GLC    + EA ELF  L   K 
Sbjct: 477 ISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKI 536

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           +     YN LI+G C+ G++  A+EL   +    LVP+  TY  +I GLC+ G++ KA+D
Sbjct: 537 KPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKD 596

Query: 509 LFLDMEENAAAPDVITFDMLIHGF 532
              D+ +     + + +  L+HG+
Sbjct: 597 FIDDLHKQNVKLNEMCYSALLHGY 620



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 219/463 (47%), Gaps = 37/463 (7%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           + C   +   FN L++     SRI +A  +   + A    P V T + L+NGL +    +
Sbjct: 148 KRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFI 207

Query: 184 IALNLFEEMANGNGEIGVVCKPNT---------------------------------VTY 210
               LF+E  N     GV   P T                                 VTY
Sbjct: 208 TVWELFDESVNA----GVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTY 263

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I GLCK   V +A  +   +  + +  DVVTY +L+ G C    +    +L  EM++
Sbjct: 264 NVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVE 323

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G  P+    + ++D L K  K+D+A  L+  + + G  PN   YN L++  C  G +++
Sbjct: 324 LGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDK 383

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE L+ +M  M  + + ++Y+ILI+ +C++  ++ A+S +  M+  GI  TV  YN+L  
Sbjct: 384 AELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLIN 443

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +   +  A  LF EM   GV     T+T+ I G CK+  + +A +L+  +       
Sbjct: 444 GQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITP 503

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++  +  LI GLC + ++  A ELF  L    + P  VTYN++I+G C DG++DKA +L 
Sbjct: 504 NVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL 563

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
            DM +    PD  T+  LI G       SK  + +  + ++ V
Sbjct: 564 EDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNV 606



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 194/396 (48%), Gaps = 21/396 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNIL 102
           EA  +FD ++     P  V+ +N+L+    ++   D        ++  GL P+ YTY  L
Sbjct: 523 EASELFDELVERKIKPTEVT-YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C  GRVS        + +     N   +++L+ G   E R+MEA +   ++   G 
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             +++ +  LI+G  +        +L ++M +         +P+ V Y+++ID   KEG 
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQG------LRPDNVIYTSMIDTYSKEGS 695

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             KA   +  M  E   P+VVTY +L++GLC A + + A  LF  M    V P+ +T+  
Sbjct: 696 FKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGC 755

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +D L K   M EA  L   M+ +G+  N  T+N ++ GFC +G+ + A ++   M   G
Sbjct: 756 FLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENG 814

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D V+Y+ LI  YC++  V  ++ L+  M+++G++P +V YN L  G     +++ A 
Sbjct: 815 IFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAF 874

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +L D+M R G+  D +        L K G I EA  
Sbjct: 875 ELRDDMLRRGIIPDNKY-------LQKKGTIFEATH 903



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 1/341 (0%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           N+ P+V T ++L++GL     +     LF E ++ GV+P   T + ++  +C+ +    A
Sbjct: 185 NLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRA 244

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
              +  M   G   +  TYN L+ G C   +++ A E+  S+   G   D V+Y  L+ G
Sbjct: 245 KEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLG 304

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +C+ ++ E  + L  EMV  G  PT    + L  GL +  +++ A +L  ++ R G   +
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y   I+ LCK G + +A  L+  + ++    +   Y+ LID  C+SGRL  A   F 
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    +   V  YN +I G C  G +  A  LF++M      P   TF  LI G+ +  
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL 484

Query: 537 EPSKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKNEISLKS 576
           +  K  +L +KM +  + P+  +  +++  L   N+++  S
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 169/396 (42%), Gaps = 57/396 (14%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRL-----------------FIE----------- 267
           +N+N    +Y  ++H L H+  +  A  L                 F++           
Sbjct: 97  KNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTL 156

Query: 268 ------------------------MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
                                   M    + P V T + +++ L K RK      L D  
Sbjct: 157 GFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDES 216

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V  GVRP+  T + ++   C +    RA+E    ME+ G     V+YN+LI+G CK   V
Sbjct: 217 VNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRV 276

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            EA+ + R +  KG+   VVTY TL LG   + Q E  ++L DEM   G +      +  
Sbjct: 277 SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGL 336

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +DGL K G I +A EL   +       ++  YN LI+ LCK G L  A  L+ ++    L
Sbjct: 337 VDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNL 396

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN +TY+I+I   C  G++D A   F  M ++     V  ++ LI+G  +  + S    
Sbjct: 397 RPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAES 456

Query: 544 LLHKMKEKKVMPDASIVSIVV-----DLLVKNEISL 574
           L  +M  K V P A+  + ++     DL V+    L
Sbjct: 457 LFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKL 492


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/522 (31%), Positives = 261/522 (50%), Gaps = 21/522 (4%)

Query: 56  YMLRMHPSPPPVSSFNILLA------SLAKNKHYDTRLNATGLFPNLYTYNILINCFCKI 109
           Y   +H  P P ++   LLA      + A  +    +  A  +FP   + +++I+  CK 
Sbjct: 14  YHRSLHLPPSPDAAHAQLLALHESGDANAAARFLREKTAAGSIFPGFLS-SVVIDRACKS 72

Query: 110 GRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           G +    +    +L S    PN   F SLI  L   +R+ +AA     ++  G  P+V+T
Sbjct: 73  GDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVT 132

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           +  +I G C+      A  +F+EM   N      C+P+   Y  +IDG CKE  +D+A  
Sbjct: 133 FTVMIRGFCKNRMMERAWEIFQEMIKSN-----RCQPDCFLYGVLIDGYCKELRMDRALE 187

Query: 229 LFLQMK-DENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-MMDQGVQPSVVTFNVIMDE 286
           L  +M+ +  I PDVV YNS++ GLC +N + EA +   E M+ QG  P+VVT+  ++  
Sbjct: 188 LLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRG 247

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK +KM  A R+ + M++R ++P   +Y+ ++DG    G++  A  +   ME++GC+ +
Sbjct: 248 ACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELN 307

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V Y  LI+G CK+  +++A +LYR M   G  P   TY TL        + E AL LFD
Sbjct: 308 VVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFD 367

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            + RD    D   YT  + GLC+   + +A  LFR +R+     D  AYN L+ G  +S 
Sbjct: 368 HI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSE 426

Query: 467 RLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           R + A+ +   L      V N++TYN +I G C +  M     LF +M +   APD  T+
Sbjct: 427 RPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGM----VLFYEMRQRGIAPDFATY 482

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             LI   +   E  +  +L  +M    + P + ++  VV  L
Sbjct: 483 SALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARL 524



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 181/407 (44%), Gaps = 52/407 (12%)

Query: 65  PPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRV--SLG 115
           P V +F +++    KN+        +   + +    P+ + Y +LI+ +CK  R+  +L 
Sbjct: 128 PDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALE 187

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF-GCEPNVITYNTLIN 174
            +   R+ R    P+   +NS++ GL   +R +EA     +     GC P V+TY +LI 
Sbjct: 188 LLREMRVERR-IQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIR 246

Query: 175 GLCRTGHTMIALNLFEEM---------------ANGNGEIGVV--------------CKP 205
           G C+     +A+ ++  M                +G  + G V              C+ 
Sbjct: 247 GACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCEL 306

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V Y+T+IDGLCK GF+D A AL+  MK     P+  TY +LI   C  +    A  LF
Sbjct: 307 NVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLF 366

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             + D      V  +  ++  LC+ R++D+A  L   M   GV  +   YN L+ G    
Sbjct: 367 DHIRDY-CPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHG---A 422

Query: 326 GKINRAEELFGSMESMG----CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            +  R EE F  +E +G    C  + ++YN +I G C    +E  + L+ EM  +GI P 
Sbjct: 423 FRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPD 478

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
             TY+ L   L    ++  A  L +EM   G++  +      +  LC
Sbjct: 479 FATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLC 525



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 164/349 (46%), Gaps = 6/349 (1%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDE 295
           ++ P     ++ +  L  + D N A R   E    G + P  ++ +V++D  CK+  +  
Sbjct: 19  HLPPSPDAAHAQLLALHESGDANAAARFLREKTAAGSIFPGFLS-SVVIDRACKSGDLRG 77

Query: 296 ASRLLDLMVQRGVRP-NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           A  +L  M+  G  P N   + +L+D      ++  A      M   G   D V++ ++I
Sbjct: 78  ALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMI 137

Query: 355 NGYCKNKEVEEALSLYREMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG- 412
            G+CKN+ +E A  +++EM+ S   +P    Y  L  G  +  +++ AL+L  EM+ +  
Sbjct: 138 RGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERR 197

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKFA 471
           +  D   Y + +DGLC++   +EA +      +L+ C   +  Y  LI G CK+ ++K A
Sbjct: 198 IQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLA 257

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             ++ ++    + P +V+Y+++I GL   G++  A  +  +ME      +V+ +  LI G
Sbjct: 258 VRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDG 317

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +         L   MK     P+    + ++D   +N+ +  +L  F
Sbjct: 318 LCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLF 366



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 10/216 (4%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +  +G FPN  TY  LI+ FC+  R       F  I   C   + A + +++ GL  E R
Sbjct: 334 MKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYC-PLDVAMYTAVVSGLCRERR 392

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A ALF +++  G   +   YN L++G  R+     A  + EE+ +  G     C  N
Sbjct: 393 LDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPG-----CVAN 447

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +TY+T+I G C E        LF +M+   I PD  TY++LI  L  + +   A  L  
Sbjct: 448 LLTYNTVIAGCCLE----SGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCE 503

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           EM+  G+ P       ++  LC +R+ D A++++++
Sbjct: 504 EMLASGLSPPSGVLGRVVARLCWSRRGDLAAKVIEM 539


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 252/496 (50%), Gaps = 16/496 (3%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           LL  +++  H   R       PN  +Y  ++   C   R          +  S    +  
Sbjct: 107 LLVDMSREAHPAAR-------PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVV 159

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+ +LI+GL   S +  A  L  ++   G +PNV+ Y+ L+ G CR+G       +FE+M
Sbjct: 160 TYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDM 219

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           +          KP+ + ++ +ID LCKEG   KA  +   M    + P+VVTYN LI+ L
Sbjct: 220 SRRG------IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSL 273

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRP 310
           C      EA  L  EM D+GV P VVT+N ++  L    +MDEA   L+ M+Q    V P
Sbjct: 274 CKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEP 333

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  T+N+++ G C +G++ +A ++   M   GC  + V+YN LI G+ +  +V+ A++L 
Sbjct: 334 DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLM 393

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            E+   G++P   TY+ L  G  ++ +V+ A K    M++ G+ A+   Y   +  +C+ 
Sbjct: 394 DELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQ 453

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G +  A+ LF  +    C LD  AY+ +I G CKSG +K   +L   +    L P+ VTY
Sbjct: 454 GMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTY 512

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           +++I      G +++A  +   M  +   PDV  FD LI G+    +  KV +L+H+M+ 
Sbjct: 513 SMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRA 572

Query: 551 KKVMPDASIVSIVVDL 566
           K V  D  I+S ++ L
Sbjct: 573 KNVAFDPKIISTIIRL 588



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/501 (30%), Positives = 251/501 (50%), Gaps = 58/501 (11%)

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV---I 167
           R +  F+A   + R      AA  N  ++G    + + EA +L + L      P+V   +
Sbjct: 37  RTAAPFLAV--LFRRGRADAAALLNRRLRG----APVTEACSLLSAL------PDVRDAV 84

Query: 168 TYNTLINGLCRTG--HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           +YNT++  LCR G  H   A +L  +M+    E     +PN V+Y+T++ GLC      +
Sbjct: 85  SYNTVLAALCRRGGDHLRQARSLLVDMSR---EAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A AL   M+   +  DVVTY +LI GLC A++ + A  L  EM   GVQP+VV ++ ++ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             C++ +  +  ++ + M +RG++P+   +  L+D  C  GK  +A ++   M   G + 
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           + V+YN+LIN  CK   V EAL+L +EM  KG+ P VVTYNTL  GL  + +++ A+   
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 406 DEM-QRDGVA-ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +EM Q D V   D  T+ + I GLCK G + +AV++   +    C  ++  YN LI G  
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG--------------------------- 496
           +  ++K A  L   L    L P+  TY+I+I G                           
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441

Query: 497 --------LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
                   +C  G M++A  LF +M++N    D I +  +IHG  +  +   V +L+  M
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
            ++ + PDA   S+++++  K
Sbjct: 501 LDEGLAPDAVTYSMLINMYAK 521


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 256/526 (48%), Gaps = 38/526 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N ++ +L K +  D       ++   G+ PN  TY  +I+ +  +GR       
Sbjct: 149 PDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKM 208

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P+  ++NS +  L    R  EAA +F  + A G  PN++TY  L++G   
Sbjct: 209 FREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYAT 268

Query: 179 TGHTMIALNLFEEMANGNGEI------------------------------GVVCKPNTV 208
            G     ++ F  M  G+G +                              G    P+  
Sbjct: 269 EGCFADMMSFFNTM-KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVF 327

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TYST+I  LC+ G +  A   F QM    + P+ V Y+SLI G C   D  +AK L  EM
Sbjct: 328 TYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEM 387

Query: 269 MDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ G+ +P++  FN I+  +CK  ++ +A  + DL+   G R +   +NTL+DG+CL+G+
Sbjct: 388 MNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGE 447

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + +A  +  +M S G   D  +YN L+NGY K+  +++ L+L+REM  K IKPT VTYN 
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI 507

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  GLF   +   A K+  EM   G      TY   + GLC+N    EA+ +F+ L  + 
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            + +I   N +I+ +    R + A +LF ++    LVPN  TY IMI+ L  +G +++A 
Sbjct: 568 VKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           ++F  ME++  AP     +  I   +   E  K    + K+  K +
Sbjct: 628 NMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 247/479 (51%), Gaps = 6/479 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-A 152
           P ++TY +++N  C+  R  LG   FGR+LR+    +    N+++K L    R  +A   
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   GC P+  +Y  ++  LC    +  AL+L   MA   G    VC P+ VTY+T
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEG----VCSPDVVTYNT 121

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I G  KEG + KA  L+ +M  +   PDVVT+NS+I+ LC A   + A+ L  +M+D G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P+ VT+  ++       + +EA+++   M  RG+ P+  ++N+ MD  C  G+   A 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E+F SM + G + + V+Y IL++GY       + +S +  M   GI    + +  L    
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +   ++ A+ +  EMQ  G++ D  TY+T I  LC+ G + +AV+ F  +     + + 
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361

Query: 453 QAYNCLIDGLCKSGRLKFAWEL-FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             Y+ LI G C  G L  A EL +  + +G+  PN+  +N ++  +C +G++  A  +F 
Sbjct: 362 VVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFD 421

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +++     D+I F+ LI G+  + E  K   +L  M    + PD    + +V+   K+
Sbjct: 422 LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 174/361 (48%), Gaps = 3/361 (0%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           V  P   TY  +++G C+    +   A F ++    +  D    N+++  LC     ++A
Sbjct: 3   VAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDA 62

Query: 262 KRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV-QRGV-RPNACTYNTL 318
            ++ +  M + G  P   ++ +++  LC + +  +A  LL +M  + GV  P+  TYNT+
Sbjct: 63  VKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           + GF   GKI +A  L+  M   G   D V++N +IN  CK + V+ A  L R+MV  G+
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P  VTY ++  G   + + E A K+F EM   G+  D  ++ +F+D LCK+G   EA E
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +F ++       +I  Y  L+ G    G        F ++    +V N + + I+I    
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G MD+A  +  +M+    +PDV T+  LI    R+   +   +  ++M    V P+  
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTV 362

Query: 559 I 559
           +
Sbjct: 363 V 363



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 3/243 (1%)

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK-LFDE 407
           +Y +++NG C+ +  E  L+ +  ++  G+K      NT+   L    + + A+K L   
Sbjct: 10  TYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRR 69

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK--CELDIQAYNCLIDGLCKS 465
           M   G   D  +Y   +  LC +    +A++L R +   +  C  D+  YN +I G  K 
Sbjct: 70  MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G++  A  L+  +     VP+VVT+N +I  LC    +D A  L   M +N   P+ +T+
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTY 189

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
             +IHG+  +    +  ++  +M  + ++PD    +  +D L K+  S ++   F     
Sbjct: 190 TSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAA 249

Query: 586 QGE 588
           +G 
Sbjct: 250 KGH 252


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 181/563 (32%), Positives = 271/563 (48%), Gaps = 27/563 (4%)

Query: 34  DLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVSSFNILLAS---- 76
           ++ TR   +NV+T N             +A  +F+ ML M    P   ++N+L+      
Sbjct: 371 EMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML-MAGLEPDTWTYNLLIDGYLKS 429

Query: 77  --LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
             +AK       + A  L P+ +TY++LI+  C    +        +++R+   PN   +
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
            +LIK    ESR   A  L   + A G  P++  YN LI GLCR      A  L  +M  
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-- 547

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
             GE G+  KPN  TY   I+   K G +  A+  F  M    I P+ V Y  LI G C 
Sbjct: 548 --GEKGI--KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
             +  EA   F  M+++G+ P +  ++ I+  L KN K  EA  +    ++ GV P+   
Sbjct: 604 VGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFL 663

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN+L+ GFC  G I +A +L+  M   G   + V YN LING CK  EV +A  L+ E+ 
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            K + P VVTY+T+  G  +   +  A KLFDEM   G++ D   Y   IDG  K G + 
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 783

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           +A+ LF   +  K    + A+N LID  CK G++  A ELF  +    L PN+VTY I+I
Sbjct: 784 KALSLFHEAQ-QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 842

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
                   M++A  LFLDME     P+ +T+  L+  + +I    K+  L   M+ + + 
Sbjct: 843 DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIA 902

Query: 555 PDASIVSIVVDLLVKNEISLKSL 577
            DA    ++     K   SL++L
Sbjct: 903 CDAIAYGVMASAYCKEGKSLEAL 925



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 171/598 (28%), Positives = 279/598 (46%), Gaps = 83/598 (13%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N  +  L +    D  L         GL P+ +TY +L++ FCK  R     + 
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +  S   PN  T+ +LI G   E  I EA  +  ++   G + NV+TYN +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A++LF EM     E      P+T TY+ +IDG  K   + KA  L  +MK   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGLE------PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF------------------ 280
            P   TY+ LI GLCH++D  +A  +  +M+  GV+P+V  +                  
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 281 -----------------NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                            N ++  LC+ +K++EA  LL  M ++G++PNA TY   ++ + 
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYC------------------------- 358
             G+I  AE  F  M S G   ++V Y ILI G+C                         
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 359 ----------KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
                     KN + +EA+ ++ + +  G+ P V  YN+L  G  +   +E A +L+DEM
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
             +G+  +   Y T I+GLCK G + +A ELF  +       D+  Y+ +IDG CKSG L
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A++LF  +    + P+   Y I+I G   +G ++KA  LF + ++ +    +  F+ L
Sbjct: 748 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSL 806

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           I  F +  +  +  EL   M +KK+ P+    +I++D   K E+  ++   FL  E +
Sbjct: 807 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 864



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 260/548 (47%), Gaps = 79/548 (14%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G FP L   N L+    K   + L +  +G ++ +   P+  T+ ++IK       ++
Sbjct: 200 SEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVI 259

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +   + ++++   C+PN+ TYN  I GLC+TG    AL + + M     E G+   P+  
Sbjct: 260 KGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM----EKGL--GPDGH 312

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINP---------------------------- 240
           TY+ ++DG CK+    +AK +F  M    +NP                            
Sbjct: 313 TYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372

Query: 241 -------DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD-------- 285
                  +VVTYN++I G+  A +  +A  LF EM+  G++P   T+N+++D        
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDM 432

Query: 286 ---------------------------ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
                                       LC +  + +A+ +LD M++ GV+PN   Y TL
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTL 492

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  +    +   A EL   M + G   D   YN LI G C+ K+VEEA  L  +M  KGI
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI 552

Query: 379 KPTVVTYNTLFLGLF-EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           KP   TY   F+ L+ +  +++ A + F +M   G+  +   YT  I G C  G  +EA+
Sbjct: 553 KPNAHTYGA-FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
             F+ +       DI+AY+ +I  L K+G+ K A  +F       +VP+V  YN +I G 
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C +G ++KA  L+ +M  N   P+++ ++ LI+G  ++ E +K  EL  +++EK ++PD 
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDV 731

Query: 558 SIVSIVVD 565
              S ++D
Sbjct: 732 VTYSTIID 739



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 224/445 (50%), Gaps = 7/445 (1%)

Query: 81   KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
            + Y   + ++G+ PN   Y ILI   C +G        F  +L     P+   ++++I  
Sbjct: 576  ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635

Query: 141  LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
            L    +  EA  +F K    G  P+V  YN+LI+G C+ G    A  L++EM + NG   
Sbjct: 636  LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH-NG--- 691

Query: 201  VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
                PN V Y+T+I+GLCK G V KA+ LF +++++++ PDVVTY+++I G C + +  E
Sbjct: 692  --INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTE 749

Query: 261  AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
            A +LF EM+ +G+ P    + +++D   K   +++A  L     Q+ V  +   +N+L+D
Sbjct: 750  AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLID 808

Query: 321  GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
             FC  GK+  A ELF  M       + V+Y ILI+ Y K + +EEA  L+ +M ++ I P
Sbjct: 809  SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 868

Query: 381  TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              +TY +L L   +I      + LF +M+  G+A D   Y       CK G  +EA++L 
Sbjct: 869  NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL 928

Query: 441  RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
                +   +L+   ++ LI  LCK  ++    EL   +    L  +  T N ++ G    
Sbjct: 929  NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKS 988

Query: 501  GQMDKARDLFLDMEENAAAPDVITF 525
            G  D+A  +   M+     P  ++ 
Sbjct: 989  GNEDEASKVLGVMQRLGWVPTSLSL 1013



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 253/502 (50%), Gaps = 19/502 (3%)

Query: 65   PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P +  +N L+  L + K  +        +   G+ PN +TY   IN + K G + +    
Sbjct: 519  PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  +L S   PN   +  LIKG       +EA + F  +   G  P++  Y+ +I+ L +
Sbjct: 579  FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G T  A+ +F +      + GVV  P+   Y+++I G CKEG ++KA  L+ +M    I
Sbjct: 639  NGKTKEAMGVFLKFL----KTGVV--PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            NP++V YN+LI+GLC   +  +A+ LF E+ ++ + P VVT++ I+D  CK+  + EA +
Sbjct: 693  NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 299  LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF--GSMESMGCKHDDVSYNILING 356
            L D M+ +G+ P+   Y  L+DG    G + +A  LF     +S+G      ++N LI+ 
Sbjct: 753  LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS---AFNSLIDS 809

Query: 357  YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            +CK+ +V EA  L+ +MV K + P +VTY  L     +   +E A +LF +M+   +  +
Sbjct: 810  FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869

Query: 417  TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF- 475
            T TYT+ +    + G   + + LF+ +       D  AY  +    CK G+   A +L  
Sbjct: 870  TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN 929

Query: 476  CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             SL  G+ + + V ++ +I  LC + Q+    +L  +M +   +    T + L+ GF + 
Sbjct: 930  KSLVEGIKLEDDV-FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKS 988

Query: 536  NEPSKVNELLHKMKEKKVMPDA 557
                + +++L  M+    +P +
Sbjct: 989  GNEDEASKVLGVMQRLGWVPTS 1010



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 234/495 (47%), Gaps = 7/495 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           NL  ++I I+ F  +G ++     F   +   F P     N+L++ L   + +     ++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +      P+V TY  +I   C+ G  +    +  EM          CKPN  TY+  I
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFI 283

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLC+ G VD+A  +   M ++ + PD  TY  L+ G C      EAK +F  M   G+ 
Sbjct: 284 GGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  T+  ++D   K   ++EA R+ D M+ RG++ N  TYN ++ G    G++ +A  L
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   G + D  +YN+LI+GY K+ ++ +A  L  EM ++ + P+  TY+ L  GL  
Sbjct: 404 FNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              ++ A ++ D+M R+GV  +   Y T I    +      A+EL + +       D+  
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YNCLI GLC++ +++ A  L   +    + PN  TY   I      G++  A   F DM 
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
            +   P+ + + +LI G   +    +       M EK ++PD    S ++  L KN  + 
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 575 KSLPSFLVQERQGEV 589
           +++  FL   + G V
Sbjct: 644 EAMGVFLKFLKTGVV 658



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 214/414 (51%), Gaps = 14/414 (3%)

Query: 39   EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGL 92
            +G  +V    EA   F  ML      P + +++ ++ SL+KN      +        TG+
Sbjct: 599  KGHCDVGNTVEALSTFKCMLE-KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 93   FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
             P+++ YN LI+ FCK G +      +  +L +   PN   +N+LI GL     + +A  
Sbjct: 658  VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARE 717

Query: 153  LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            LF +++     P+V+TY+T+I+G C++G+   A  LF+EM      I     P+   Y  
Sbjct: 718  LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM------ISKGISPDGYIYCI 771

Query: 213  IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            +IDG  KEG ++KA +LF + + +++   +  +NSLI   C      EA+ LF +M+D+ 
Sbjct: 772  LIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 830

Query: 273  VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            + P++VT+ +++D   K   M+EA +L   M  R + PN  TY +L+  +  +G   +  
Sbjct: 831  LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 890

Query: 333  ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
             LF  ME+ G   D ++Y ++ + YCK  +  EAL L  + + +GIK     ++ L   L
Sbjct: 891  SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 950

Query: 393  FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
             +  Q+   L+L  EM ++ ++  ++T  T + G  K+G   EA ++   ++ L
Sbjct: 951  CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 60/353 (16%)

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRP-----------------NACTYNTLMDG 321
           +++++   LC +  + +A  +L+ ++Q    P                 N   ++  +D 
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F ++G +N A  +F +  S G     +  N L+    K   +     +Y  MV   I P 
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V TY  +     ++  V     +  EM+++    +  TY  FI GLC+ G + EA+E+ +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP---------------- 485
            +       D   Y  L+DG CK  R K A  +F S+P   L P                
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360

Query: 486 -------------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                              NVVTYN MI G+   G+M KA  LF +M      PD  T++
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYN 420

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-------DLLVKNEI 572
           +LI G+++ ++ +K  ELL +MK +K+ P     S+++       DL   NE+
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 12/271 (4%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-----ATGLFPNLYTYNILI 103
            EAF +FD M+    SP     + IL+    K  + +  L+           +L  +N LI
Sbjct: 749  EAFKLFDEMISKGISPDGYI-YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLI 807

Query: 104  NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
            + FCK G+V      F  ++    TPN  T+  LI        + EA  LF  ++     
Sbjct: 808  DSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII 867

Query: 164  PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
            PN +TY +L+    + G+    ++LF++M       G+ C  + + Y  +    CKEG  
Sbjct: 868  PNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR----GIAC--DAIAYGVMASAYCKEGKS 921

Query: 224  DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             +A  L  +   E I  +   +++LI  LC     +    L  EM  + +  S  T N +
Sbjct: 922  LEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTL 981

Query: 284  MDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
            +    K+   DEAS++L +M + G  P + +
Sbjct: 982  LLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 264/515 (51%), Gaps = 16/515 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A  +FD M +     P + S N LL +L KN    T      ++   G+ P+++  +I++
Sbjct: 175 ALYVFDNMGKC-GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 233

Query: 104 NCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           N FCK G+V  + GF+   ++      PN  T++SLI G  +   +  A  +   +   G
Sbjct: 234 NAFCKDGKVDEAAGFVK--KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              NV+TY  LI G C+       ++  E++  G  E   +  P+   Y  +IDG C+ G
Sbjct: 292 VSRNVVTYTLLIKGYCK----QCKMDEAEKVLRGMQEEAALV-PDERAYGVLIDGYCRTG 346

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  L  +M    +  ++   NSLI+G C   + +EA+ +   M+D  ++P   ++N
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  C+     EA  L D M+Q G+ P   TYNTL+ G C +G  + A +++  M   
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 466

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D+V Y+ L++G  K +  E A +L+++++++G   + +T+NT+  GL ++ ++  A
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++FD+M+  G + D  TY T IDG CK   + +A ++   +        I+ YN LI G
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L KS RL    +L   +    L PN+VTY  +I G C +G +DKA   + +M EN  + +
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +I    ++ G  R+    + N L+ KM +    PD
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 164/558 (29%), Positives = 260/558 (46%), Gaps = 76/558 (13%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
             L P+   Y +LI+ +C+ G++         +LR     N    NSLI G      I E
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  + T++  +  +P+  +YNTL++G CR GHT  A NL ++M     E      P  +T
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PTVLT 439

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ GLC+ G  D A  ++  M    + PD V Y++L+ GL    ++  A  L+ +++
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G   S +TFN ++  LCK  KM EA  + D M   G  P+  TY TL+DG+C    + 
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A ++ G+ME          YN LI+G  K++ + E   L  EM  +G+ P +VTY  L 
Sbjct: 560 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 619

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR----- 444
            G  +   ++ A   + EM  +G++A+    +T + GL + G I EA  L + +      
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 445 -----ILKCELDIQA----------------------YNCLIDGLCKSGRLKFAWELF-- 475
                 LK ++   A                      YN  I GLCK+G++  A   F  
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 476 -------------CSLPHGV--------------------LVPNVVTYNIMIQGLCNDGQ 502
                        C+L HG                     LVPN+VTYN +I GLC    
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D+A+ LF  + +    P+V+T++ LI G+ +I       +L  KM E+ + P     S 
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 563 VVDLLVKN---EISLKSL 577
           +++ L K+   E S+K L
Sbjct: 860 LINGLCKHGDIERSMKLL 877



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 253/540 (46%), Gaps = 45/540 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+N LL    +  H     N        G+ P + TYN L+   C++G        
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +++    P+   +++L+ GL        A+ L+  + A G   + IT+NT+I+GLC+
Sbjct: 460 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  + A  +F++M +      + C P+ +TY T+IDG CK   V +A  +   M+ E I
Sbjct: 520 MGKMVEAEEIFDKMKD------LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 573

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P +  YNSLI GL  +    E   L  EM  +G+ P++VT+  ++D  CK   +D+A  
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG---------------- 342
               M + G+  N    +T++ G   +G+I+ A  L   M   G                
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 693

Query: 343 ------------CKH----DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
                       CK     +++ YNI I G CK  +V++A   +  +  KG  P   TY 
Sbjct: 694 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 753

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G      V+ A +L DEM R G+  +  TY   I+GLCK+  +  A  LF  L   
Sbjct: 754 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               ++  YN LIDG CK G +  A++L   +    + P+VVTY+ +I GLC  G ++++
Sbjct: 814 GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERS 873

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L   M +      +I +  L+ G+IR  E  K+++ L+ M   + +   +I    VDL
Sbjct: 874 MKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHK-LYDMMHIRCLSTTAISHKQVDL 932



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 271/569 (47%), Gaps = 32/569 (5%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-TR--LNA------------ 89
           + P  +   F ++ +     P V S+  L+  L++ + YD TR  LN             
Sbjct: 80  LNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGN 139

Query: 90  ------TGLFPNL----YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
                  G++         +++++  + + G        F  + +    P+  + NSL+ 
Sbjct: 140 VIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
            L        A  ++ ++   G  P+V   + ++N  C+ G    A    ++M N    +
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN----L 255

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GV  +PN VTY ++I+G    G V+ AK +   M ++ ++ +VVTY  LI G C     +
Sbjct: 256 GV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 260 EAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           EA+++   M ++  + P    + V++D  C+  K+D+A RLLD M++ G++ N    N+L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++G+C  G+I+ AE +   M     K D  SYN L++GYC+     EA +L  +M+ +GI
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +PTV+TYNTL  GL  +   + AL+++  M + GVA D   Y+T +DGL K      A  
Sbjct: 434 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAST 493

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L++ +           +N +I GLCK G++  A E+F  +      P+ +TY  +I G C
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 553

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
               + +A  +   ME    +P +  ++ LI G  +     +V +LL +M  + + P+  
Sbjct: 554 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 613

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               ++D   K  +  K+  S+      G
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENG 642



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 191/371 (51%), Gaps = 24/371 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF +   M R  P  P +  +N L++ L K++         T +   GL PN+ TY  L
Sbjct: 560 QAFKVKGAMER-EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 618

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ +CK G +   F ++  +  +  + N    ++++ GL+   RI EA  L  K+   G 
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK----PNTVTYSTIIDGLC 218
            P+   +  L + +       IA +L E            CK    PN + Y+  I GLC
Sbjct: 679 FPDHECF--LKSDIRYAAIQKIADSLDES-----------CKTFLLPNNIVYNIAIAGLC 725

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G VD A+  F  +  +   PD  TY +LIHG   A + +EA RL  EM+ +G+ P++V
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N +++ LCK+  +D A RL   + Q+G+ PN  TYNTL+DG+C +G ++ A +L   M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G     V+Y+ LING CK+ ++E ++ L  +M+  G+   ++ Y TL  G     ++
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEM 905

Query: 399 EHALKLFDEMQ 409
           +   KL+D M 
Sbjct: 906 QKIHKLYDMMH 916


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 264/515 (51%), Gaps = 16/515 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A  +FD M +     P + S N LL +L KN    T      ++   G+ P+++  +I++
Sbjct: 141 ALYVFDNMGKCG-RIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMV 199

Query: 104 NCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           N FCK G+V  + GF+   ++      PN  T++SLI G  +   +  A  +   +   G
Sbjct: 200 NAFCKDGKVDEAAGFVK--KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              NV+TY  LI G C+       ++  E++  G  E   +  P+   Y  +IDG C+ G
Sbjct: 258 VSRNVVTYTLLIKGYCKQ----CKMDEAEKVLRGMQEEAALV-PDERAYGVLIDGYCRTG 312

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  L  +M    +  ++   NSLI+G C   + +EA+ +   M+D  ++P   ++N
Sbjct: 313 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 372

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  C+     EA  L D M+Q G+ P   TYNTL+ G C +G  + A +++  M   
Sbjct: 373 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 432

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D+V Y+ L++G  K +  E A +L+++++++G   + +T+NT+  GL ++ ++  A
Sbjct: 433 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 492

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++FD+M+  G + D  TY T IDG CK   + +A ++   +        I+ YN LI G
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 552

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L KS RL    +L   +    L PN+VTY  +I G C +G +DKA   + +M EN  + +
Sbjct: 553 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 612

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +I    ++ G  R+    + N L+ KM +    PD
Sbjct: 613 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 647



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 157/533 (29%), Positives = 248/533 (46%), Gaps = 73/533 (13%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
             L P+   Y +LI+ +C+ G++         +LR     N    NSLI G      I E
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  + T++  +  +P+  +YNTL++G CR GHT  A NL ++M     E      P  +T
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PTVLT 405

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ GLC+ G  D A  ++  M    + PD V Y++L+ GL    ++  A  L+ +++
Sbjct: 406 YNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 465

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G   S +TFN ++  LCK  KM EA  + D M   G  P+  TY TL+DG+C    + 
Sbjct: 466 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 525

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A ++ G+ME          YN LI+G  K++ + E   L  EM  +G+ P +VTY  L 
Sbjct: 526 QAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALI 585

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR----- 444
            G  +   ++ A   + EM  +G++A+    +T + GL + G I EA  L + +      
Sbjct: 586 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 645

Query: 445 -----ILKCELDIQA----------------------YNCLIDGLCKSGRLKFAWELF-- 475
                 LK ++   A                      YN  I GLCK+G++  A   F  
Sbjct: 646 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 705

Query: 476 -------------CSLPHGV--------------------LVPNVVTYNIMIQGLCNDGQ 502
                        C+L HG                     LVPN+VTYN +I GLC    
Sbjct: 706 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           +D+A+ LF  + +    P+V+T++ LI G+ +I       +L  KM E+ + P
Sbjct: 766 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 271/569 (47%), Gaps = 32/569 (5%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-TR--LNA------------ 89
           + P  +   F ++ +     P V S+  L+  L++ + YD TR  LN             
Sbjct: 46  LNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGN 105

Query: 90  ------TGLFPNL----YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
                  G++         +++++  + + G        F  + +    P+  + NSL+ 
Sbjct: 106 VIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 165

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
            L        A  ++ ++   G  P+V   + ++N  C+ G    A    ++M N    +
Sbjct: 166 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN----L 221

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GV  +PN VTY ++I+G    G V+ AK +   M ++ ++ +VVTY  LI G C     +
Sbjct: 222 GV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 279

Query: 260 EAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           EA+++   M ++  + P    + V++D  C+  K+D+A RLLD M++ G++ N    N+L
Sbjct: 280 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 339

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++G+C  G+I+ AE +   M     K D  SYN L++GYC+     EA +L  +M+ +GI
Sbjct: 340 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 399

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +PTV+TYNTL  GL  +   + AL+++  M + GVA D   Y+T +DGL K      A  
Sbjct: 400 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAST 459

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L++ +           +N +I GLCK G++  A E+F  +      P+ +TY  +I G C
Sbjct: 460 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 519

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
               + +A  +   ME    +P +  ++ LI G  +     +V +LL +M  + + P+  
Sbjct: 520 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 579

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               ++D   K  +  K+  S+      G
Sbjct: 580 TYGALIDGWCKEGMLDKAFSSYFEMTENG 608



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 225/493 (45%), Gaps = 61/493 (12%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  NL+  N LIN +CK G +        R++     P++ ++N+L+ G   E    EA
Sbjct: 328 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 387

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN---GNGEIGVVC---- 203
             L  K+   G EP V+TYNTL+ GLCR G    AL ++  M        E+G       
Sbjct: 388 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDG 447

Query: 204 ----------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                                   + +T++T+I GLCK G + +A+ +F +MKD   +PD
Sbjct: 448 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 507

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            +TY +LI G C A++  +A ++   M  + + PS+  +N ++  L K+R++ E + LL 
Sbjct: 508 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 567

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M  RG+ PN  TY  L+DG+C  G +++A   +  M   G   + +  + +++G  +  
Sbjct: 568 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 627

Query: 362 EVEEALSLYREMVSKG--------------------------------IKPTVVTYNTLF 389
            ++EA  L ++MV  G                                + P  + YN   
Sbjct: 628 RIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAI 687

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  +V+ A + F  +   G   D  TY T I G    G + EA  L   +      
Sbjct: 688 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 747

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +I  YN LI+GLCKS  +  A  LF  L    L PNVVTYN +I G C  G MD A  L
Sbjct: 748 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807

Query: 510 FLDMEENAAAPDV 522
              M E   +P +
Sbjct: 808 KDKMIEEGISPSI 820



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 207/448 (46%), Gaps = 44/448 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+N LL    +  H     N        G+ P + TYN L+   C++G        
Sbjct: 366 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 425

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +++    P+   +++L+ GL        A+ L+  + A G   + IT+NT+I+GLC+
Sbjct: 426 WHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 485

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  + A  +F++M +      + C P+ +TY T+IDG CK   V +A  +   M+ E I
Sbjct: 486 MGKMVEAEEIFDKMKD------LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 539

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P +  YNSLI GL  +    E   L  EM  +G+ P++VT+  ++D  CK   +D+A  
Sbjct: 540 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 599

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG---------------- 342
               M + G+  N    +T++ G   +G+I+ A  L   M   G                
Sbjct: 600 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 659

Query: 343 ------------CKH----DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
                       CK     +++ YNI I G CK  +V++A   +  +  KG  P   TY 
Sbjct: 660 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 719

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G      V+ A +L DEM R G+  +  TY   I+GLCK+  +  A  LF  L   
Sbjct: 720 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 779

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWEL 474
               ++  YN LIDG CK G +  A++L
Sbjct: 780 GLFPNVVTYNTLIDGYCKIGNMDAAFKL 807



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 205/427 (48%), Gaps = 39/427 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EAF + D ML+     P V ++N LL  L +   +D  L         G+ P+   Y+ 
Sbjct: 385 SEAFNLCDKMLQ-EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++   K+         +  IL   FT +  TFN++I GL    +++EA  +F K+K  G
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 162 CEPNVITYNTLINGLCRTGHTMIALN-----------------------LFE-----EMA 193
           C P+ ITY TLI+G C+  +   A                         LF+     E+ 
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563

Query: 194 NGNGEIGVV-CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           +   E+G+    PN VTY  +IDG CKEG +DKA + + +M +  ++ +++  ++++ GL
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 623

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
                 +EA  L  +M+D G  P    F   +    +   + + +  LD   +  + PN 
Sbjct: 624 YRLGRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNN 680

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             YN  + G C  GK++ A   F  +   G   D+ +Y  LI+GY     V+EA  L  E
Sbjct: 681 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 740

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+ +G+ P +VTYN L  GL +   V+ A +LF ++ + G+  +  TY T IDG CK G 
Sbjct: 741 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 800

Query: 433 IIEAVEL 439
           +  A +L
Sbjct: 801 MDAAFKL 807



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 166/353 (47%), Gaps = 46/353 (13%)

Query: 69  SFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           +FN +++ L K        + +D ++   G  P+  TY  LI+ +CK   V   F   G 
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFD-KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 533

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           + R   +P+   +NSLI GL    R++E   L T++   G  PN++TY  LI+G C+ G 
Sbjct: 534 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 593

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A + + EM   NG        N +  ST++ GL + G +D+A  L  +M D    PD
Sbjct: 594 LDKAFSSYFEMTE-NG-----LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 647

Query: 242 V--------------------------------VTYNSLIHGLCHANDWNEAKRLFIEMM 269
                                            + YN  I GLC     ++A+R F  + 
Sbjct: 648 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 707

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P   T+  ++        +DEA RL D M++RG+ PN  TYN L++G C    ++
Sbjct: 708 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVD 767

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           RA+ LF  +   G   + V+YN LI+GYCK   ++ A  L  +M+ +GI P++
Sbjct: 768 RAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 24/304 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF +   M R  P  P +  +N L++ L K++         T +   GL PN+ TY  L
Sbjct: 526 QAFKVKGAMER-EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 584

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ +CK G +   F ++  +  +  + N    ++++ GL+   RI EA  L  K+   G 
Sbjct: 585 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK----PNTVTYSTIIDGLC 218
            P+   +  L + +       IA +L E            CK    PN + Y+  I GLC
Sbjct: 645 FPDHECF--LKSDIRYAAIQKIADSLDES-----------CKTFLLPNNIVYNIAIAGLC 691

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G VD A+  F  +  +   PD  TY +LIHG   A + +EA RL  EM+ +G+ P++V
Sbjct: 692 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 751

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N +++ LCK+  +D A RL   + Q+G+ PN  TYNTL+DG+C +G ++ A +L   M
Sbjct: 752 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811

Query: 339 ESMG 342
              G
Sbjct: 812 IEEG 815


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/352 (38%), Positives = 213/352 (60%), Gaps = 6/352 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           + PN  T N+LIKGL  + +I +A     KL A G   + ++Y TLI+GLC+ G T  AL
Sbjct: 3   YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 62

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L + +       G + + N V Y+T+I G+CK+  V+ A  L+ +M  + I+P+VVTY+
Sbjct: 63  DLLQRVD------GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 116

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LI G        +A  LF +++ + ++P   TFN+++D  CK+RKM E   +  +M+++
Sbjct: 117 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ 176

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P+  TYN+L+DG+ L+ ++N A+ +F +M   G   D  SYNILING+CK K+V++A
Sbjct: 177 GIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 236

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           ++L+ EM  K I P VVTYN+L  GL +  ++ +AL+L D+M   GV  +  TY + ID 
Sbjct: 237 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 296

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           L K   + +A+ L    +    +  +  Y  LIDGLCK GRLK A  +F  L
Sbjct: 297 LFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 184/353 (52%), Gaps = 6/353 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN  T N LI   C  G++   F+   +++   F  +  ++ +LI GL        A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++     + N + YNT+I G+C+  H   A +L+ EM +          PN VTY
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG------ISPNVVTY 115

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S +I G    G +  A  LF ++  ENI PD  T+N L+ G C      E K +F  MM 
Sbjct: 116 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 175

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           QG+ P VVT+N ++D     ++++ A  + + M Q GV P+  +YN L++GFC + K+++
Sbjct: 176 QGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 235

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  LF  M       + V+YN LI+G  K+  +  AL L  +M  +G+ P ++TYN++  
Sbjct: 236 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 295

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            LF+ HQV+ A+ L  + +  G+     TYT  IDGLCK G + +A  +F  L
Sbjct: 296 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 188/330 (56%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PNT+T +T+I GLC +G + +A     ++     + D V+Y +LIHGLC   +   A  L
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              +  + VQ + V +N ++  +CK++ +++A  L   MV +G+ PN  TY+ L+ GF +
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +GK+  A +LF  +     K D  ++NIL++G+CK+++++E  +++  M+ +GI P VVT
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L  G   + +V  A  +F+ M + GV  D R+Y   I+G CK   + +A+ LF  + 
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 ++  YN LIDGL KSGR+ +A +L   +    + PN++TYN +I  L    Q+D
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 304

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           KA  L    ++    P + T+ +LI G  +
Sbjct: 305 KAIALITKFKDQGIQPSMYTYTILIDGLCK 334



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 189/353 (53%), Gaps = 6/353 (1%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  PN IT NTLI GLC  G    A    +++      + +    + V+Y T+I GLCK 
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKL------VALGFHLDQVSYGTLIHGLCKV 55

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G    A  L  ++  + +  + V YN++I+G+C     N+A  L+ EM+ +G+ P+VVT+
Sbjct: 56  GETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 115

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++       K+ +A  L + ++   ++P+  T+N L+DGFC   K+   + +F  M  
Sbjct: 116 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 175

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   D V+YN L++GY   KEV  A S++  M   G+ P + +YN L  G  +I +V+ 
Sbjct: 176 QGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 235

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A+ LF+EM    +  +  TY + IDGL K+G I  A++L   +       +I  YN +ID
Sbjct: 236 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 295

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            L K+ ++  A  L        + P++ TY I+I GLC  G++  AR++F D+
Sbjct: 296 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 179/326 (54%), Gaps = 6/326 (1%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           +  +L A G   +  +Y  LI+  CK+G          R+       NA  +N++I G+ 
Sbjct: 29  FHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMC 88

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            +  + +A  L++++ + G  PNV+TY+ LI+G    G    A++LF ++   N      
Sbjct: 89  KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILEN------ 142

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
            KP+  T++ ++DG CK+  + + K +F  M  + I PDVVTYNSL+ G     + N AK
Sbjct: 143 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAK 202

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            +F  M   GV P + ++N++++  CK +K+D+A  L + M  + + PN  TYN+L+DG 
Sbjct: 203 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 262

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              G+I+ A +L   M   G   + ++YN +I+   K  +V++A++L  +   +GI+P++
Sbjct: 263 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 322

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEM 408
            TY  L  GL +  +++ A  +F+++
Sbjct: 323 YTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 163/333 (48%), Gaps = 35/333 (10%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P+ +T N ++  LC   ++ +A    D +V  G   +  +Y TL+ G C +G+   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   ++    + + V YN +I G CK+K V +A  LY EMVSKGI P VVTY+ L  G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN--------------------- 430
            F + +++ A+ LF+++  + +  D  T+   +DG CK+                     
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 431 ---------GY-----IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
                    GY     +  A  +F T+       DI++YN LI+G CK  ++  A  LF 
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    ++PNVVTYN +I GL   G++  A  L   M +    P+++T++ +I    + +
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +  K   L+ K K++ + P     +I++D L K
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 334



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 142/264 (53%)

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  PN  T NTL+ G CL G+I++A      + ++G   D VSY  LI+G CK  E   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           L L + +  K ++   V YNT+  G+ +   V  A  L+ EM   G++ +  TY+  I G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
               G + +A++LF  + +   + D   +N L+DG CK  ++K    +F  +    ++P+
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTYN ++ G     +++ A+ +F  M +    PD+ ++++LI+GF +I +  K   L +
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 547 KMKEKKVMPDASIVSIVVDLLVKN 570
           +M  K ++P+    + ++D L K+
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKS 265



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 17/262 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNIL 102
           N+AF ++  M+    SP  V+   ++       K  D      ++    + P+ YT+NIL
Sbjct: 94  NDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNIL 153

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ FCK  ++  G   F  +++    P+  T+NSL+ G      +  A ++F  +   G 
Sbjct: 154 VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGV 213

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIIDGLCK 219
            P++ +YN LING C+      A+NLF EM          CK   PN VTY+++IDGL K
Sbjct: 214 NPDIRSYNILINGFCKIKKVDKAMNLFNEMH---------CKNIIPNVVTYNSLIDGLSK 264

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G +  A  L  QM D  + P+++TYNS+I  L   +  ++A  L  +  DQG+QPS+ T
Sbjct: 265 SGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYT 324

Query: 280 FNVIMDELCKNRKMDEASRLLD 301
           + +++D LCK  ++ +A  + +
Sbjct: 325 YTILIDGLCKGGRLKDARNIFE 346



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 114/225 (50%)

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           MG   + ++ N LI G C   ++ +A   + ++V+ G     V+Y TL  GL ++ +   
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL L   +    V  +   Y T I G+CK+ ++ +A +L+  +       ++  Y+ LI 
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G    G+LK A +LF  +    + P+  T+NI++ G C D +M + + +F  M +    P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           DV+T++ L+ G+  + E +    + + M +  V PD    +I+++
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILIN 225



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 86/176 (48%)

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +T T  T I GLC  G I +A      L  L   LD  +Y  LI GLCK G  + A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +L   +   ++  N V YN +I G+C D  ++ A DL+ +M     +P+V+T+  LI G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           F  + +     +L +K+  + + PD    +I+VD   K+    +    F +  +QG
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQG 177



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 7/151 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           N A  IF+ M +   +P  + S+NIL+    K K  D  +N         + PN+ TYN 
Sbjct: 199 NTAKSIFNTMAQGGVNPD-IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNS 257

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+   K GR+S       ++      PN  T+NS+I  L    ++ +A AL TK K  G
Sbjct: 258 LIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 317

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            +P++ TY  LI+GLC+ G    A N+FE++
Sbjct: 318 IQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 248/484 (51%), Gaps = 6/484 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+Y  LI+   K G        + R++     P+  T+++L+  L    
Sbjct: 182 KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I     L  ++++ G  PN+ T+   I  L R G    A  + + M +        C P
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG------CGP 295

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC  G ++ AK LFL+MK  +  PD VTY +L+       D +  K  +
Sbjct: 296 DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFW 355

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P VVTF +++D LCK  K+DEA   LD+M ++GV PN  TYNTL+ G   +
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRL 415

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A ELF SMES+G +    +Y + I+ Y K+ E  +A+  + +M + GI P +V  
Sbjct: 416 NRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVAC 475

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L E  ++E A + F+ +++ G+A D  TY   +    K G + +A++L   +  
Sbjct: 476 NASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEE 535

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C+ ++   N LID L K+ R+  AW++F  +    L P VVTYN ++ GL  +G++ +
Sbjct: 536 NGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQE 595

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  LF  M  +   P+ I+F+ L+    +  E     ++L +M E    PD    + V+ 
Sbjct: 596 ATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIY 655

Query: 566 LLVK 569
            L+K
Sbjct: 656 GLIK 659



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 161/514 (31%), Positives = 257/514 (50%), Gaps = 21/514 (4%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + + N  L SLA+       K +   L   GL P+  TYNIL+ C+ K GRV      
Sbjct: 470 PNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKL 529

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  +   P     NSLI  L+   R+ EA  +F ++K     P V+TYNTL+ GL +
Sbjct: 530 LSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGK 589

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  LF+      G I   C PNT++++T++D LCK G VD A  +  +M + N 
Sbjct: 590 EGRVQEATALFK------GMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNC 643

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDV+TYN++I+GL   N  N A  LF   M + + P  VT   ++  + K+ ++++A R
Sbjct: 644 FPDVLTYNTVIYGLIKENRVNYAFWLF-HQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFR 702

Query: 299 LLDLMVQR-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK---HDDVSYNILI 354
           +    V   G   +   +  LM G  +  +I ++  LF   ES+ C     DD     L+
Sbjct: 703 VAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSI-LFA--ESLVCNTICEDDSVLIPLV 759

Query: 355 NGYCKNKEVEEALSLYREMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
              CK+ +  +A +++ ++  S  I P++  YN+L  GL +    E A  LF +M+  G 
Sbjct: 760 KFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGC 819

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  TY  F+D L K+G I E  +L+  +    C+ +   +N +I GL KS  L  A +
Sbjct: 820 TPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAID 879

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L+  L  G   P   TY  +I GL   G++++A+  F +M +    P+   +++L++GF 
Sbjct: 880 LYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFG 939

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +  +     EL  +M ++ + PD    SI+VD L
Sbjct: 940 KQGDVETACELFRRMVKEGIRPDLKSYSIMVDCL 973



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 255/535 (47%), Gaps = 50/535 (9%)

Query: 65   PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P   ++NIL+    K    D      + +   G  P +   N LI+   K  RV   +  
Sbjct: 505  PDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKM 564

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F R+      P   T+N+L+ GL  E R+ EA ALF  + A  C PN I++NTL++ LC+
Sbjct: 565  FQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCK 624

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G   +AL +   M   N      C P+ +TY+T+I GL KE  V+ A  LF QMK + I
Sbjct: 625  NGEVDLALKMLFRMTEMN------CFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVI 677

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRL---------------FIEMMDQGV---------- 273
             PD VT  +L+ G+       +A R+               F E +  G+          
Sbjct: 678  YPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSI 737

Query: 274  --QPSVVTFNVIMDE---------LCKNRK-MDEASRLLDLMVQRGVRPNACTYNTLMDG 321
                S+V   +  D+         LCK+ K +D  +  L L     + P+   YN+L+DG
Sbjct: 738  LFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDG 797

Query: 322  FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
                     A  LF  M++ GC  D  +YN+ ++   K+ +++E   LY EM+ +G KP 
Sbjct: 798  LLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPN 857

Query: 382  VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             +T+N +  GL + + ++ A+ L+ ++     +    TY   IDGL K G + EA + F 
Sbjct: 858  TITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFE 917

Query: 442  TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             +    C  +   YN L++G  K G ++ A ELF  +    + P++ +Y+IM+  LC  G
Sbjct: 918  EMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVG 977

Query: 502  QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            ++D A   F +++ +   PD++ ++++I+G  R     +   L  +M+ + + PD
Sbjct: 978  KVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPD 1032



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 161/543 (29%), Positives = 264/543 (48%), Gaps = 49/543 (9%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
            +EA+ +F  M  M  +P  V ++N LLA L K         AT LF         PN  +
Sbjct: 559  DEAWKMFQRMKEMKLAPT-VVTYNTLLAGLGKEGRVQ---EATALFKGMIADDCPPNTIS 614

Query: 99   YNILINCFCKIGRVSLGFIAFGRILR-SCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +N L++C CK G V L      R+   +CF P+  T+N++I GL  E+R+  A  LF ++
Sbjct: 615  FNTLLDCLCKNGEVDLALKMLFRMTEMNCF-PDVLTYNTVIYGLIKENRVNYAFWLFHQM 673

Query: 158  KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-------ANGN------------GE 198
            K     P+ +T  TL+ G+ + G    A  + +E        A+G+             E
Sbjct: 674  KKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAE 732

Query: 199  IG------------VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTY 245
            IG             +C+ ++V    ++  LCK G    A  +FL++ K   I P +  Y
Sbjct: 733  IGQSILFAESLVCNTICEDDSVLIP-LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAY 791

Query: 246  NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            NSLI GL  A     A  LF +M + G  P V T+N+ +D L K+ K+ E   L + M+ 
Sbjct: 792  NSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLF 851

Query: 306  RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            RG +PN  T+N ++ G      +++A +L+  + S        +Y  LI+G  K   +EE
Sbjct: 852  RGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911

Query: 366  ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
            A   + EM+  G  P    YN L  G  +   VE A +LF  M ++G+  D ++Y+  +D
Sbjct: 912  AKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVD 971

Query: 426  GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
             LC  G + +A+  F  L++   + D+  YN +I+GL +S R++ A  LF  + +  + P
Sbjct: 972  CLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITP 1031

Query: 486  NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            ++ TYN +I  L   G +++A  ++ +++     P+V T++ LI G      P +   + 
Sbjct: 1032 DLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVY 1091

Query: 546  HKM 548
             KM
Sbjct: 1092 KKM 1094



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 254/555 (45%), Gaps = 67/555 (12%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K + + + A G  P++ T+ ILI+  CK+G+V   F     + +    PN  T+N+LI G
Sbjct: 352 KEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICG 411

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG---- 195
           L   +R+ EA  LF  +++ G E    TY   I+   ++G +  A+  FE+M  NG    
Sbjct: 412 LLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPN 471

Query: 196 ------------------------NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
                                   NG       P+ +TY+ ++    K G VD A  L  
Sbjct: 472 IVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLS 531

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M++   +P+VV  NSLI  L  A+  +EA ++F  M +  + P+VVT+N ++  L K  
Sbjct: 532 EMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEG 591

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++ EA+ L   M+     PN  ++NTL+D  C  G+++ A ++   M  M C  D ++YN
Sbjct: 592 RVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYN 651

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE-MQR 410
            +I G  K   V  A  L+ +M  K I P  VT  TL  G+ +  ++E A ++  E +  
Sbjct: 652 TVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHH 710

Query: 411 DGVAADTRTYTTFIDG-----------------------------------LCKNGYIIE 435
            G  AD   +   + G                                   LCK+G  ++
Sbjct: 711 VGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVD 770

Query: 436 AVELFRTLRILKC-ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           A  +F  L    C    ++AYN LIDGL K+   + AW LF  + +    P+V TYN+ +
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFL 830

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             L   G++ +  DL+ +M      P+ IT +++I G ++ N   K  +L + +      
Sbjct: 831 DALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFS 890

Query: 555 PDASIVSIVVDLLVK 569
           P       ++D L+K
Sbjct: 891 PTPWTYGPLIDGLLK 905



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 238/485 (49%), Gaps = 7/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + G+ P+L TY+ L+    K   +         +      PN  TF   I+ L    
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +I EA  +  ++   GC P+V+TY  LI+ LC  G    A  LF +M   +       KP
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH------KP 330

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY T++D     G +D  K  + +M+ +   PDVVT+  LI  LC     +EA    
Sbjct: 331 DRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTL 390

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M  QGV P++ T+N ++  L +  ++DEA  L + M   G+   A TY   +D +   
Sbjct: 391 DVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKS 450

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+  +A + F  M++ G   + V+ N  +    +   +EEA   +  +   G+ P  +TY
Sbjct: 451 GESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITY 510

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L     +  +V+ A+KL  EM+ +G   +     + ID L K   + EA ++F+ ++ 
Sbjct: 511 NILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +K    +  YN L+ GL K GR++ A  LF  +      PN +++N ++  LC +G++D 
Sbjct: 571 MKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDL 630

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +   M E    PDV+T++ +I+G I+ N  +    L H+MK K + PD   +  ++ 
Sbjct: 631 ALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLP 689

Query: 566 LLVKN 570
            ++K+
Sbjct: 690 GVIKD 694



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 241/526 (45%), Gaps = 55/526 (10%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
             EA  +F  M+     PP   SFN LL  L KN   D       R+     FP++ TYN 
Sbjct: 594  QEATALFKGMI-ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNT 652

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF- 160
            +I    K  RV+  F  F + ++    P+  T  +L+ G+  + RI +A   F   K F 
Sbjct: 653  VIYGLIKENRVNYAFWLFHQ-MKKVIYPDYVTLCTLLPGVIKDGRIEDA---FRVAKEFV 708

Query: 161  ---GCEPNVITYNTLING-----------------------------------LCRTGHT 182
               G   +   +  L+ G                                   LC+ G  
Sbjct: 709  HHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKA 768

Query: 183  MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            + A N+F ++            P+   Y+++IDGL K    + A  LF +MK+    PDV
Sbjct: 769  VDAYNVFLKLTKS-----FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823

Query: 243  VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             TYN  +  L  +    E   L+ EM+ +G +P+ +T N+++  L K+  +D+A  L   
Sbjct: 824  FTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883

Query: 303  MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
            ++     P   TY  L+DG   +G++  A++ F  M   GC  +   YNIL+NG+ K  +
Sbjct: 884  LMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD 943

Query: 363  VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            VE A  L+R MV +GI+P + +Y+ +   L  + +V+ AL  F+E++  G+  D   Y  
Sbjct: 944  VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003

Query: 423  FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
             I+GL ++  + EA+ LF  +R      D+  YN LI  L  +G ++ A +++  L    
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063

Query: 483  LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            L PNV TYN +I+G    G  D+A  ++  M      P+  TF  L
Sbjct: 1064 LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 192/409 (46%), Gaps = 43/409 (10%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           + K +  TY TI   L   G + +A     +M+      +  +Y  LIH L  +    EA
Sbjct: 152 IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREA 211

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            +++  M+ +G++PS+ T++ +M  L K R ++    LL  M   G+RPN  T+   +  
Sbjct: 212 LKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRI 271

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
               GKI+ A  +   M+  GC  D V+Y +LI+  C   ++  A  L+ +M +   KP 
Sbjct: 272 LGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPD 331

Query: 382 VVTYNTLFLGLFEIHQVEHALKLF-DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VTY TL L  F  H    A+K F  EM+ DG   D  T+T  ID LCK G + EA   F
Sbjct: 332 RVTYITL-LDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEA---F 387

Query: 441 RTLRILKCE---LDIQAYNCLIDGLCKSGRLKFAWELFCSLPH----------------- 480
            TL ++K +    ++  YN LI GL +  RL  A ELF S+                   
Sbjct: 388 GTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY 447

Query: 481 ------------------GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
                               +VPN+V  N  +  L   G++++A++ F  +++   APD 
Sbjct: 448 GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDA 507

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           IT+++L+  + +        +LL +M+E    P+  I++ ++D L K +
Sbjct: 508 ITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKAD 556



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 152/312 (48%), Gaps = 13/312 (4%)

Query: 50   AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
            A+ +F Y ++     P V ++N+ L +L K+       +        G  PN  T+NI+I
Sbjct: 807  AWGLF-YKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVI 865

Query: 104  NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
                K   +      +  ++   F+P   T+  LI GL    R+ EA   F ++  +GC 
Sbjct: 866  FGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCM 925

Query: 164  PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
            PN   YN L+NG  + G    A  LF  M           +P+  +YS ++D LC  G V
Sbjct: 926  PNCPLYNILMNGFGKQGDVETACELFRRMVKEG------IRPDLKSYSIMVDCLCMVGKV 979

Query: 224  DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            D A   F ++K   ++PD+V YN +I+GL  +    EA  LF EM ++G+ P + T+N +
Sbjct: 980  DDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039

Query: 284  MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
            +  L     ++EA ++ + +  +G+ PN  TYN L+ G  + G  +RA  ++  M   GC
Sbjct: 1040 ILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099

Query: 344  KHDDVSYNILIN 355
            + +  ++  L N
Sbjct: 1100 RPNTGTFAQLPN 1111



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 167/373 (44%), Gaps = 42/373 (11%)

Query: 256 NDWNEAKRLFIEMMDQGVQPSVV----TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           +D N+A   F  + +    P V+    T N +++ L  +R++++   + +LM ++ ++ +
Sbjct: 100 SDPNQAFSFFNSVAEM---PRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRS 156

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TY T+     + G +  A      M  +G   +  SY  LI+   K+    EAL +YR
Sbjct: 157 INTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYR 216

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV------------------ 413
            MVS+GIKP++ TY+ L + L +   +E  + L  EM+  G+                  
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276

Query: 414 -----------------AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
                              D  TYT  ID LC  G +  A ELF  ++    + D   Y 
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+D     G L    E +  +     +P+VVT+ I+I  LC  G++D+A      M++ 
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQ 396

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
             AP++ T++ LI G +R+N   +  EL + M+   +   A    + +D   K+  S K+
Sbjct: 397 GVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKA 456

Query: 577 LPSFLVQERQGEV 589
           + +F   +  G V
Sbjct: 457 IKTFEKMKTNGIV 469


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 247/476 (51%), Gaps = 9/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++     LI  FC+IG+          + +S   P+  T+N LI G      I  A
Sbjct: 144 GDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA 203

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++      P+V+TYNT++  LC +G    A+ + +       ++   C P+ +TY
Sbjct: 204 LQVLDRMNV---APDVVTYNTILRTLCDSGKLKQAMEVLDR------QLQKECYPDVITY 254

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+  CKE  V +A  L  +M+++   PDVVTYN LI+G+C     +EA +    M  
Sbjct: 255 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 314

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G QP+V+T N+I+  +C   +  +A +LL  M+++G  P+  T+N L++  C  G + R
Sbjct: 315 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 374

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++   M   GC  + +SYN L++G+CK K+++ A+     MVS+G  P +VTYNTL  
Sbjct: 375 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 434

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +V+ A+++ +++   G +    TY T IDGL K G    A++L   +R    + 
Sbjct: 435 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 494

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y+ L+ GL + G++  A + F  L    + PN +TYN ++ GLC   Q D+A D  
Sbjct: 495 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 554

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             M      P   T+ +LI G        +  +LL+++  + ++  +S   + V +
Sbjct: 555 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 233/456 (51%), Gaps = 9/456 (1%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G +  GF     ++     P+     SLI+G     +  +A  +   L+  G  P+VITY
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N LI+G C++G    AL + + M            P+ VTY+TI+  LC  G + +A  +
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRMN---------VAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +   +   PDV+TY  LI   C  +   +A +L  EM ++G +P VVT+NV+++ +CK
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             ++DEA + L+ M   G +PN  T+N ++   C  G+   AE+L   M   GC    V+
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +NILIN  C+   +  A+ +  +M   G  P  ++YN L  G  +  +++ A++  D M 
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   D  TY T +  LCK+G +  AVE+   L    C   +  YN +IDGL K G+ +
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A +L   +    L P+++TY+ ++ GL  +G++D+A   F D+E     P+ IT++ ++
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            G  +  +  +  + L  M  K+  P  +  +I+++
Sbjct: 539 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 574



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 218/425 (51%), Gaps = 9/425 (2%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRL---NATGLFPNLYTYNILINCFCKIGRVS 113
           +L    + P V ++N+L++   K+   D  L   +   + P++ TYN ++   C  G++ 
Sbjct: 174 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLK 233

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                  R L+    P+  T+  LI+    ES + +A  L  +++  G +P+V+TYN LI
Sbjct: 234 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 293

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           NG+C+ G    A+     M +        C+PN +T++ I+  +C  G    A+ L   M
Sbjct: 294 NGICKEGRLDEAIKFLNNMPSYG------CQPNVITHNIILRSMCSTGRWMDAEKLLSDM 347

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             +  +P VVT+N LI+ LC       A  +  +M   G  P+ +++N ++   CK +KM
Sbjct: 348 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 407

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D A   LD+MV RG  P+  TYNTL+   C  GK++ A E+   + S GC    ++YN +
Sbjct: 408 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 467

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G  K  + E A+ L  EM  KG+KP ++TY++L  GL    +V+ A+K F +++  G+
Sbjct: 468 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 527

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  TY + + GLCK+     A++    +   +C+     Y  LI+G+   G  K A +
Sbjct: 528 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD 587

Query: 474 LFCSL 478
           L   L
Sbjct: 588 LLNEL 592



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 150/274 (54%), Gaps = 3/274 (1%)

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L +N ++++  + L+ MV RG  P+     +L+ GFC +GK  +A  +   +E  G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D ++YN+LI+GYCK+ E++ AL +   M    + P VVTYNT+   L +  +++ A++
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           + D   +     D  TYT  I+  CK   + +A++L   +R    + D+  YN LI+G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K GRL  A +   ++P     PNV+T+NI+++ +C+ G+   A  L  DM     +P V+
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           TF++LI+   R     +  ++L KM      P++
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 159/307 (51%), Gaps = 4/307 (1%)

Query: 265 FIE-MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           F+E M+ +G  P ++    ++   C+  K  +A+ +++++ Q G  P+  TYN L+ G+C
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 195

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+I+ A ++   ++ M    D V+YN ++   C + ++++A+ +    + K   P V+
Sbjct: 196 KSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY  L     +   V  A+KL DEM+  G   D  TY   I+G+CK G + EA++    +
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C+ ++  +N ++  +C +GR   A +L   +      P+VVT+NI+I  LC  G +
Sbjct: 313 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 372

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A D+   M  +   P+ ++++ L+HGF +  +  +  E L  M  +   PD    + +
Sbjct: 373 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 432

Query: 564 VDLLVKN 570
           +  L K+
Sbjct: 433 LTALCKD 439


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 240/459 (52%), Gaps = 10/459 (2%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R+   PN+ TFN+L+ G   + R  +   L   + A   +PNV++YN L+ GLC+     
Sbjct: 3   RTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWH 62

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  L  +M +  G       P+ VTYST++ G CK G V++++ L  ++    + PD +
Sbjct: 63  EAEELVRDMISRGGRS----TPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y  ++  LC +    EA  L  EM+  G  P+++TFN ++   C+ + ++ A  LL  M
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM 178

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              GV+ +  TYNTLMDG C  G++  AE+L   M++ GC  D V+Y+  + G CK+ +V
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTT 422
            +A  +  +M      P VVTYNT+  GL +  +++ AL++ ++M   DG   +   Y+T
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            +DGLCK G   EA  +   +    C  D+  Y+ L++GLCK+G+++ A E    +    
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA-----PDVITFDMLIHGFIRINE 537
             PN VTY  ++ GLC+ G++ +A  +  +M           P V T++ LI G  +   
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR 418

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
                +   +M+ +   PD    S +V+ L ++  +L++
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/409 (33%), Positives = 216/409 (52%), Gaps = 28/409 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCF 106
           + D + R   S P + +++ LL+   K  K  ++R     + + GL P+   Y  ++   
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK  R+         ++R+   P   TFN+LI G   E  +  A +L  K+ A G + +V
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           +TYNTL++GLC+ G    A  L E M A+G       C P+ V YS+ + GLCK G V  
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASG-------CAPDVVAYSSFVYGLCKSGKVLD 240

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-----GVQPSVVTF 280
           A  +  QM+D + +P+VVTYN+++ GLC +   + A    +EMM+Q     G   +VV +
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGY 296

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++D LCK  +  EA  +++ M + G RP+  TY++L++G C  GKI  A E    M  
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK-----PTVVTYNTLFLGLFEI 395
            GCK + V+Y  L++G C    + EA  +  EM S G       P+V TYN L  GL + 
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKA 416

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            +++ ALK F  M+  G   D  +Y+T ++GL ++G  ++A  +   +R
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 142/270 (52%), Gaps = 2/270 (0%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M + G  PN+ T+N L++GF   G+    E L  +M +   + + VSYN L+ G CK + 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 363 VEEALSLYREMVSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             EA  L R+M+S+G +  P +VTY+TL  G  +  +VE + +L  E+   G+  D   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  +  LCK+  + EA+EL   +    C   +  +N LI G C+   L+ A  L   +  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             +  +VVTYN ++ GLC  G++ +A  L   M+ +  APDV+ +   ++G  +  +   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +++L +M++    P+    + ++D L K+
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKS 270


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 258/500 (51%), Gaps = 15/500 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRV--SLGF 116
           P + S N LL +L KN    T      ++   G+ P+++  +I++N FCK G+V  + GF
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +   ++      PN  T++SLI G  +   +  A  +   +   G   NV+TY  LI G 
Sbjct: 249 VK--KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 306

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+       ++  E++  G  E   +  P+   Y  +IDG C+ G +D A  L  +M   
Sbjct: 307 CK----QCKMDEAEKVLRGMQEEAALV-PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            +  ++   NSLI+G C   + +EA+ +   M+D  ++P   ++N ++D  C+     EA
Sbjct: 362 GLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA 421

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L D M+Q G+ P   TYNTL+ G C +G  + A +++  M   G   D+V Y+ L++G
Sbjct: 422 FNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDG 481

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
             K +  E A +L+++++++G   + +T+NT+  GL ++ ++  A ++FD+M+  G + D
Sbjct: 482 LFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY T IDG CK   + +A ++   +        I+ YN LI GL KS RL    +L  
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L PN+VTY  +I G C +G +DKA   + +M EN  + ++I    ++ G  R+ 
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 537 EPSKVNELLHKMKEKKVMPD 556
              + N L+ KM +    PD
Sbjct: 662 RIDEANLLMQKMVDHGFFPD 681



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 164/558 (29%), Positives = 260/558 (46%), Gaps = 76/558 (13%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
             L P+   Y +LI+ +C+ G++         +LR     N    NSLI G      I E
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  + T++  +  +P+  +YNTL++G CR GHT  A NL ++M     E      P  +T
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PTVLT 439

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ GLC+ G  D A  ++  M    + PD V Y++L+ GL    ++  A  L+ +++
Sbjct: 440 YNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G   S +TFN ++  LCK  KM EA  + D M   G  P+  TY TL+DG+C    + 
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A ++ G+ME          YN LI+G  K++ + E   L  EM  +G+ P +VTY  L 
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR----- 444
            G  +   ++ A   + EM  +G++A+    +T + GL + G I EA  L + +      
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679

Query: 445 -----ILKCELDIQA----------------------YNCLIDGLCKSGRLKFAWELF-- 475
                 LK ++   A                      YN  I GLCK+G++  A   F  
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 476 -------------CSLPHGV--------------------LVPNVVTYNIMIQGLCNDGQ 502
                        C+L HG                     LVPN+VTYN +I GLC    
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D+A+ LF  + +    P+V+T++ LI G+ +I       +L  KM E+ + P     S 
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 563 VVDLLVKN---EISLKSL 577
           +++ L K+   E S+K L
Sbjct: 860 LINGLCKHGDIERSMKLL 877



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 242/525 (46%), Gaps = 47/525 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+N LL    +  H     N        G+ P + TYN L+   C++G        
Sbjct: 400 PDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQI 459

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +++    P+   +++L+ GL        A+ L+  + A G   + IT+NT+I+GLC+
Sbjct: 460 WHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCK 519

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  + A  +F++M +      + C P+ +TY T+IDG CK   V +A  +   M+ E I
Sbjct: 520 MGKMVEAEEIFDKMKD------LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXI 573

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P +  YNSLI GL  +    E   L  EM  +G+ P++VT+  ++D  CK   +D+A  
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG---------------- 342
               M + G+  N    +T++ G   +G+I+ A  L   M   G                
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 693

Query: 343 ------------CKH----DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
                       CK     +++ YNI I G CK  +V++A   +  +  KG  P   TY 
Sbjct: 694 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 753

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G      V+ A +L DEM R G+  +  TY   I+GLCK+  +  A  LF  L   
Sbjct: 754 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               ++  YN LIDG CK G +  A++L   +    + P+VVTY+ +I GLC  G ++++
Sbjct: 814 GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERS 873

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRI---NEPSKVNELLHKM 548
             L   M +      +I +  L+ G  +    NE SK   L   M
Sbjct: 874 MKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNM 918



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 270/569 (47%), Gaps = 32/569 (5%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-TR--LNA------------ 89
           + P  +   F ++ +     P V S+  L+  L++ + YD TR  LN             
Sbjct: 80  LNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGN 139

Query: 90  ------TGLFPNL----YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
                  G++         +++++  + + G        F  + +    P+  + NSL+ 
Sbjct: 140 VIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLN 199

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
            L        A  ++ ++   G  P+V   + ++N  C+ G    A    ++M N    +
Sbjct: 200 NLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMEN----L 255

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GV  +PN VTY ++I+G    G V+ AK +   M ++ ++ +VVTY  LI G C     +
Sbjct: 256 GV--EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 260 EAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           EA+++   M ++  + P    + V++D  C+  K+D+A RLLD M++ G++ N    N+L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           ++G+C  G+I+ AE +   M     K D  SYN L++GYC+     EA +L  +M+ +GI
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +PTV+TYNTL  GL  +   + AL+++  M + GVA D   Y+T +DGL K      A  
Sbjct: 434 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGAST 493

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L++ +           +N +I GLCK G++  A E+F  +      P+ +TY  +I G C
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 553

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
               + +A  +   ME    +P +  ++ LI G  +     +  +LL +M  + + P+  
Sbjct: 554 KASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIV 613

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               ++D   K  +  K+  S+      G
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENG 642



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 68/340 (20%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF +   M R   SP  +  +N L++ L K++         T +   GL PN+ TY  L
Sbjct: 560 QAFKVKGAMEREXISPS-IEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGAL 618

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG- 161
           I+ +CK G +   F ++  +  +  + N    ++++ GL+   RI EA  L  K+   G 
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 162 ---------------------------CE----PNVITYNTLINGLCRTGHTMIALNLFE 190
                                      C+    PN I YN  I GLC+TG    A   F 
Sbjct: 679 FPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 738

Query: 191 EMA---------------NGNGEIGVVCK--------------PNTVTYSTIIDGLCKEG 221
            ++               +G    G V +              PN VTY+ +I+GLCK  
Sbjct: 739 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE 798

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+A+ LF ++  + + P+VVTYN+LI G C   + + A +L  +M+++G+ PSVVT++
Sbjct: 799 NVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYS 858

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            +++ LCK+  ++ + +LL+ M++ GV      Y TL+ G
Sbjct: 859 ALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/464 (32%), Positives = 238/464 (51%), Gaps = 9/464 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G  P++ ++ +LI  F K G    G     R+L +   PNA  +N+LI  L     
Sbjct: 20  MKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGM 79

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA +   ++    C PNV++YN +I+G C+  +   AL    EM     E+G    P 
Sbjct: 80  LAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREME----ELGH--PPT 132

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
              YS+I+   CK G V KA  +F +M  +   PD+V +N L+ GL  A   +EA+ LF 
Sbjct: 133 PHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFR 192

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M  +G +P VVT+N ++  LCK +K+DEA  LL+ M Q  V P   TY TL+D  C   
Sbjct: 193 SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFA 252

Query: 327 KINRAEELFGSMESMGCKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           ++ +A E+F  M    C   + +Y+  ILING CK +   EA  +++EM  +GI PTVVT
Sbjct: 253 RLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVT 312

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNTL  GL    +++ A++L   M     A +  TY   I  LCK   + EA +L   +R
Sbjct: 313 YNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 372

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                  ++ +  L+  L ++GRL  A+EL+  +        V + NI++ G+   G +D
Sbjct: 373 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVD 432

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +A+D    M +    PD  T+D L+ G     +  +  +L+ ++
Sbjct: 433 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 208/367 (56%), Gaps = 3/367 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+  ++  +I G  K G   +  +   +M +  + P+ + YN+LI  LC A    EA+  
Sbjct: 27  PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAES- 85

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           +++ M Q   P+VV++N+I+D  CK R +++A   L  M + G  P    Y++++  FC 
Sbjct: 86  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G +++A ++F  M + GC+ D V++N+L++G  + +++ EA  L+R M S+G KP VVT
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNT+  GL +  +++ A+ L + M+++ V+    TYTT ID LCK   + +A E+F  + 
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMA 265

Query: 445 ILKCELDIQAYNC--LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
              C     AY+   LI+GLCK+ R   A E+F  +    + P VVTYN +++GL +  +
Sbjct: 266 EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAK 325

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +  A +L   M +   AP++ T+++LI    + ++  +  +LL  M++K  +P   I  +
Sbjct: 326 LQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEV 385

Query: 563 VVDLLVK 569
           ++  L +
Sbjct: 386 LLSRLAR 392



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 207/413 (50%), Gaps = 9/413 (2%)

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           I+ L     + +A A+  ++K  G  P+V ++  LI G  ++G      +  + M     
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRML---- 56

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
           E G+   PN + Y+ +I  LCK G + +A++ +L+   ++  P+VV+YN +I G C A +
Sbjct: 57  EAGLF--PNAILYNNLISCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARN 113

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             +A     EM + G  P+   ++ I+   CK   + +A  +   M  +G  P+   +N 
Sbjct: 114 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 173

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+ G     KI+ A ELF SM S GCK D V+YN +I G CK K+++EA+ L   M  + 
Sbjct: 174 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 233

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI--DGLCKNGYIIE 435
           + PT VTY TL   L +  +++ A ++F++M           Y+  I  +GLCK     E
Sbjct: 234 VSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGE 293

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A E+F+ +R       +  YN L++GL  + +L+ A EL   +   V  PN+ TY I+I 
Sbjct: 294 AKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            LC   Q+++A  L   M +    P +  +++L+    R        EL  +M
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 187/401 (46%), Gaps = 50/401 (12%)

Query: 56  YMLRM-HPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCK 108
           Y+ RM     P V S+NI++    K ++ +  L         G  P  + Y+ ++  FCK
Sbjct: 86  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            G VS     F  +      P+   FN L+ GL    +I EA  LF  + + GC+P+V+T
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID------------- 215
           YNT+I GLC+      A+ L E M   +        P  VTY+T+ID             
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLERMKQED------VSPTFVTYTTLIDHLCKFARLQQAYE 259

Query: 216 ------------------------GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
                                   GLCK     +AK +F +M+   I+P VVTYN+L+ G
Sbjct: 260 VFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEG 319

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           L       +A  L   M+DQ   P++ T+ +++  LCK  +++EA +LL  M  +G  P+
Sbjct: 320 LLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPS 379

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
              +  L+      G+++ A EL+  M  + C+    S NIL++G  +   V+EA    +
Sbjct: 380 LKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLK 439

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +M   GI P   TY+ L +GL    + + A KL +E+ RDG
Sbjct: 440 QMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 1/137 (0%)

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+Q++  LI G  KSG  +        +    L PN + YN +I  LC  G + +A    
Sbjct: 28  DVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYL 87

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M ++ A P+V++++++I G+ +     K    L +M+E    P     S +V    K 
Sbjct: 88  KRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKT 146

Query: 571 EISLKSLPSFLVQERQG 587
               K++  F     +G
Sbjct: 147 GNVSKAMDVFAEMPAKG 163


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 261/515 (50%), Gaps = 27/515 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++  ++    +N+  D+      R++  G  PN  TY+ LIN  C  GRV+     
Sbjct: 261 PDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDF 320

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + R    P   TF + I  L    RI +A  +F  +K  GC+PNV TY +LI+G   
Sbjct: 321 ISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG--- 377

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              + +A+ LF  M+      GVV  PNTVTY+ +++ L +   +D A  +F  M     
Sbjct: 378 QRVSRMAIGLFHRMSRD----GVV--PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGC 431

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  +YN LI G C   D  +A  +   M+     P++VT+N+I+   C +   D A R
Sbjct: 432 LPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIR 491

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L+LM   G +P+  +Y  L+ GFC + K+  A  +F  M   G   ++V+Y  LI+GYC
Sbjct: 492 VLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYC 551

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+++++ A  +   M   G +P V TYN L  GL + +    A +L   M  + ++ D  
Sbjct: 552 KDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVV 611

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY+T I+GLC NG I  A+E+F  +    C  ++  Y+ LI  L + GR++ A E+F  L
Sbjct: 612 TYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL 671

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L+P+ VTY  MI+     G++D+A D   +M      P + T+D+LI G       
Sbjct: 672 KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL------ 725

Query: 539 SKVNELL-HKMKEKKVMPDASIVSIVVDLLVKNEI 572
              NE++ HK+     +P+A+  S   D ++  ++
Sbjct: 726 --QNEMVYHKL---VALPNAASTSTFDDQIINKDV 755



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 239/466 (51%), Gaps = 9/466 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL PNL  YN +IN  CK G V        ++ +S   P+  T+ S+I G      +  A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F ++   GCEPN  TY+TLINGLC +G    AL+   EM       GV+  P   T+
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRH----GVL--PTVHTF 336

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +  I  LC  G ++ A  +F+ MK +   P+V TY SLI G         A  LF  M  
Sbjct: 337 TAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSR 393

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV P+ VT+N +M+ L +N ++D A  + ++M + G  PN  +YN L+ G+C +G   +
Sbjct: 394 DGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEK 453

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +  +M         V+YNI+I GYC + + + A+ +   M + G +P   +Y  L  
Sbjct: 454 AMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELIS 513

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +I ++E A  +F+EM   G+  +  TYT  I G CK+  +  A  +   ++   C  
Sbjct: 514 GFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++Q YN LI GL K      A EL   +    + P+VVTY+ +I GLCN+G +  A ++F
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             M ++   P++ T+  LI    +     +  E+  ++K++ ++PD
Sbjct: 634 NKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPD 679



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 240/510 (47%), Gaps = 25/510 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+  L +N   D+ L         G  PN  +YN LI  +C IG        
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSM 457

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L+   TP   T+N +IKG         A  +   +KA GC+P+  +Y  LI+G C+
Sbjct: 458 LTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCK 517

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                +A  +F EM +       +C PN VTY+ +I G CK+  +D A  +  +MK    
Sbjct: 518 ISKMELASGMFNEMMDRG-----LC-PNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+V TYN LIHGL   N+++ A+ L   M+++ + P VVT++ +++ LC N  +  A  
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + MV+ G  PN  TY++L+      G++  AEE+F  ++  G   D+V+Y  +I    
Sbjct: 632 MFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCV 691

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            + +V+ A     EM++ G +PT+ TY+ L  GL +   V H L          VA    
Sbjct: 692 MSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKL----------VALPNA 740

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
             T+  D    N  +I    L   L  L  EL  Q Y+ L+  L +SGR   A  L+ S+
Sbjct: 741 ASTSTFDDQIINKDVISV--LSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSM 798

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PN  TY   +  L    ++D A D+F  M +      +  +  LI    +++  
Sbjct: 799 VSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRR 858

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
            +   +  KM  + +  D  + +I+++ L+
Sbjct: 859 KEARFVFEKMLSRALNADEIVWTILINGLL 888



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 193/388 (49%), Gaps = 11/388 (2%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           ALN  +  +    ++G+       TY+T++  L K          + Q+  E + P+++ 
Sbjct: 177 ALNYLDMFSQRGPKMGLF------TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLI 230

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YNS+I+ LC   +  +A+ +  ++   G++P   T+  ++   C+NR +D A  + + M 
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G  PNA TY+TL++G C  G++N A +    M   G      ++   I   C    +E
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIE 350

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH-ALKLFDEMQRDGVAADTRTYTTF 423
           +A  ++ +M  KG KP V TY +L  G     +V   A+ LF  M RDGV  +T TY   
Sbjct: 351 DAWKIFIDMKKKGCKPNVYTYTSLISG----QRVSRMAIGLFHRMSRDGVVPNTVTYNAL 406

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ++ L +N  I  A+ +F  +    C  +  +YN LI G C  G  + A  +  ++  G  
Sbjct: 407 MNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP 466

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P +VTYNI+I+G C+ G  D A  +   M+ N   PD  ++  LI GF +I++    + 
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASG 526

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           + ++M ++ + P+    + ++    K+E
Sbjct: 527 MFNEMMDRGLCPNEVTYTALISGYCKDE 554



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 4/233 (1%)

Query: 358 CKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           C NK E+ +AL+       +G K  + TY TL + L +++     +  + ++ R+G+  +
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y + I+ LCK+G + +A  +   +     + D   Y  +I G C++  L  A+E+F 
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +      PN  TY+ +I GLCN G++++A D   +M  +   P V TF   I     + 
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMG 347

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
                 ++   MK+K   P+   V     L+    +S  ++  F    R G V
Sbjct: 348 RIEDAWKIFIDMKKKGCKPN---VYTYTSLISGQRVSRMAIGLFHRMSRDGVV 397



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 35/266 (13%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILI 103
           A  +F+ M++ H   P + +++ L+ +L +    +      + L   GL P+  TY  +I
Sbjct: 629 ALEMFNKMVK-HGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL---------- 153
                 G+V   F   G ++ +   P   T++ LIKGL  E    +  AL          
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFD 747

Query: 154 ------------FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                        +KL     E +   Y+ L++ L R+G    A NL+  M + +     
Sbjct: 748 DQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQ---- 803

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
            C PN  TY   +  L +   VD A  +F  M D+     +  Y  LI  LC  +   EA
Sbjct: 804 -C-PNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEA 861

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDEL 287
           + +F +M+ + +    + + ++++ L
Sbjct: 862 RFVFEKMLSRALNADEIVWTILINGL 887


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 291/600 (48%), Gaps = 80/600 (13%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           P++A  +F  M+ +    P + SFN +L +  ++  +       T     G+ PNL TYN
Sbjct: 94  PDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYN 153

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI   CK  +   G      +  +   P+  ++ +LI  L     +++A  LF ++   
Sbjct: 154 ILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+V+ YN LI+G  R G  + A  +++ +   +        P+  TY+ +I+GLCK 
Sbjct: 214 GVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESS-----VYPSVETYNIMINGLCKL 268

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV--- 277
           G +D++  ++ +MK    +PD+ T++S+IHGL  A ++N A+++F EM++ G+ P V   
Sbjct: 269 GKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTY 328

Query: 278 -------------------------------VTFNVIMDELCKNRKMDEASRLLDLMVQR 306
                                          V++N+++  L  N+K+++A     L+ +R
Sbjct: 329 NAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHER 388

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY---------------- 350
           G++ ++ TY  L++G C  G +N+A  +    E+ G   D  +Y                
Sbjct: 389 GLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQA 448

Query: 351 -------------------NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
                              N LINGY +  ++EEA+S+ REM SK   PTVV+YNT+  G
Sbjct: 449 VELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIING 508

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  +   A     EM  +G+  D  TY+  IDGLC+   +  A+ L+      + + D
Sbjct: 509 LCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +Q +N +I GLC + ++  A E+F  +     VP++VT+N +++GL   G   +A  ++ 
Sbjct: 569 LQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWD 628

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            + E    PD+I++++   G       S   E L+   ++ ++P+A   +++V  +V ++
Sbjct: 629 RILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 215/420 (51%), Gaps = 50/420 (11%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
           ++ +   P + +F+ ++  L+K  +++        +  +GL P++ TYN +++   + G+
Sbjct: 281 MKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGK 340

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           ++  F     ++      N  ++N LI+GL    ++ +A   +  L   G + +  TY  
Sbjct: 341 LNKCF-ELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGL 399

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LINGLC+ G+   AL + EE  N   ++      +T  YS+++ GLCK+G +++A  L  
Sbjct: 400 LINGLCKNGYLNKALRILEEAENEGADL------DTFAYSSMVHGLCKKGMLEQAVELIH 453

Query: 232 QMK------------------------DENIN-----------PDVVTYNSLIHGLCHAN 256
           QMK                        +E I+           P VV+YN++I+GLC A 
Sbjct: 454 QMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAE 513

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
            +++A     EM+++G++P ++T+++++D LC+  K+D A  L    + + ++P+   +N
Sbjct: 514 RFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHN 573

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++ G C   K++ A E+F  M  + C  D V++N ++ G  K  +  EAL ++  ++  
Sbjct: 574 IIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEA 633

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALK-LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           G++P +++YN  F GL    +V  A++ L+D + R G+  +  T+   +  +  +  ++E
Sbjct: 634 GLQPDIISYNITFKGLCSCARVSDAIEFLYDALDR-GILPNAPTWNVLVRAVVDDKPLME 692


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 247/476 (51%), Gaps = 9/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++     LI  FC+IG+          + +S   P+  T+N LI G      I  A
Sbjct: 87  GDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA 146

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++      P+V+TYNT++  LC +G    A+ + +       ++   C P+ +TY
Sbjct: 147 LQVLDRMNV---APDVVTYNTILRTLCDSGKLKQAMEVLDR------QLQKECYPDVITY 197

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+  CKE  V +A  L  +M+++   PDVVTYN LI+G+C     +EA +    M  
Sbjct: 198 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 257

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G QP+V+T N+I+  +C   +  +A +LL  M+++G  P+  T+N L++  C  G + R
Sbjct: 258 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 317

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ++   M   GC  + +SYN L++G+CK K+++ A+     MVS+G  P +VTYNTL  
Sbjct: 318 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 377

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +  +V+ A+++ +++   G +    TY T IDGL K G    A++L   +R    + 
Sbjct: 378 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 437

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y+ L+ GL + G++  A + F  L    + PN +TYN ++ GLC   Q D+A D  
Sbjct: 438 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             M      P   T+ +LI G        +  +LL+++  + ++  +S   + V +
Sbjct: 498 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 233/456 (51%), Gaps = 9/456 (1%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G +  GF     ++     P+     SLI+G     +  +A  +   L+  G  P+VITY
Sbjct: 71  GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N LI+G C++G    AL + + M            P+ VTY+TI+  LC  G + +A  +
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRMN---------VAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +   +   PDV+TY  LI   C  +   +A +L  EM ++G +P VVT+NV+++ +CK
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             ++DEA + L+ M   G +PN  T+N ++   C  G+   AE+L   M   GC    V+
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +NILIN  C+   +  A+ +  +M   G  P  ++YN L  G  +  +++ A++  D M 
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   D  TY T +  LCK+G +  AVE+   L    C   +  YN +IDGL K G+ +
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A +L   +    L P+++TY+ ++ GL  +G++D+A   F D+E     P+ IT++ ++
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            G  +  +  +  + L  M  K+  P  +  +I+++
Sbjct: 482 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 517



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 218/425 (51%), Gaps = 9/425 (2%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRL---NATGLFPNLYTYNILINCFCKIGRVS 113
           +L    + P V ++N+L++   K+   D  L   +   + P++ TYN ++   C  G++ 
Sbjct: 117 ILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLK 176

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                  R L+    P+  T+  LI+    ES + +A  L  +++  G +P+V+TYN LI
Sbjct: 177 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 236

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           NG+C+ G    A+     M +        C+PN +T++ I+  +C  G    A+ L   M
Sbjct: 237 NGICKEGRLDEAIKFLNNMPSYG------CQPNVITHNIILRSMCSTGRWMDAEKLLSDM 290

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             +  +P VVT+N LI+ LC       A  +  +M   G  P+ +++N ++   CK +KM
Sbjct: 291 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 350

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D A   LD+MV RG  P+  TYNTL+   C  GK++ A E+   + S GC    ++YN +
Sbjct: 351 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 410

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G  K  + E A+ L  EM  KG+KP ++TY++L  GL    +V+ A+K F +++  G+
Sbjct: 411 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 470

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  TY + + GLCK+     A++    +   +C+     Y  LI+G+   G  K A +
Sbjct: 471 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD 530

Query: 474 LFCSL 478
           L   L
Sbjct: 531 LLNEL 535



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 150/274 (54%), Gaps = 3/274 (1%)

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L +N ++++  + L+ MV RG  P+     +L+ GFC +GK  +A  +   +E  G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D ++YN+LI+GYCK+ E++ AL +   M    + P VVTYNT+   L +  +++ A++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           + D   +     D  TYT  I+  CK   + +A++L   +R    + D+  YN LI+G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K GRL  A +   ++P     PNV+T+NI+++ +C+ G+   A  L  DM     +P V+
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           TF++LI+   R     +  ++L KM      P++
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 159/307 (51%), Gaps = 4/307 (1%)

Query: 265 FIE-MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           F+E M+ +G  P ++    ++   C+  K  +A+ +++++ Q G  P+  TYN L+ G+C
Sbjct: 79  FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 138

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+I+ A ++   ++ M    D V+YN ++   C + ++++A+ +    + K   P V+
Sbjct: 139 KSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY  L     +   V  A+KL DEM+  G   D  TY   I+G+CK G + EA++    +
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C+ ++  +N ++  +C +GR   A +L   +      P+VVT+NI+I  LC  G +
Sbjct: 256 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 315

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A D+   M  +   P+ ++++ L+HGF +  +  +  E L  M  +   PD    + +
Sbjct: 316 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 375

Query: 564 VDLLVKN 570
           +  L K+
Sbjct: 376 LTALCKD 382


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 267/525 (50%), Gaps = 12/525 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNIL 102
           NEA  +F++M +    P   +   +++      K  D      R    G  P++ +YN +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++C  + G+V      F  + +    PN +T+N +I  L    ++  A  +   +K  G 
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PNVIT N +++ LC+      A ++FE + +        C+P+ VTY ++I+GL + G 
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEGLGRHGR 494

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD+A  L+ QM D N  P+ V Y SLI          +  +++ EM+  G  P ++  N 
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            MD + K  ++++   L   +   G  P+A +Y  L+ G    G  + A ELF +M+  G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  D  +YN +I+G+CK+ +V +A  L  EM +KG +PTVVTY ++  GL +I +++ A 
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF+E +  G+  +   Y++ IDG  K G I EA  +   L       ++  +NCL+D L
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+  +  A   F S+      PN +TY+I+I GLC   + +KA   + +M++    P+V
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            T+  +I G  +     + + L  K KEK  + D++I + +++ L
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 273/567 (48%), Gaps = 37/567 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EAF     M ++   P   S++  L+ +L+ ++  D       ++   G   N++ +  L
Sbjct: 183 EAFTFIQTMRKLKFRPA-FSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTL 241

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  F + GRV         +  +   P+   +N  I       ++  A   F ++KA G 
Sbjct: 242 IRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGL 301

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMAN---------------GNGEIGVV----- 202
             + +TY ++I  LC+      A+ LFE M                 G G  G       
Sbjct: 302 VLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYS 361

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C P+ V+Y+ I+  L ++G VD+A   F +MK + I P++ TYN +I  LC
Sbjct: 362 LLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLC 420

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A     A  +   M D G+ P+V+T N+++D LCK +++D+A  + + +  +  RP+A 
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY +L++G    G+++ A +L+  M       + V Y  LI  + K    E+   +Y EM
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +  G  P ++  NT    +F+  ++E    LF E++  G   D R+YT  I GL K G+ 
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFA 600

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA ELF T++   C LD +AYN +IDG CKSG++  A++L   +      P VVTY  +
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I GL    ++D+A  LF + +      +V+ +  LI GF ++    +   ++ ++ +K +
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSF 580
            P+    + ++D LVK E   ++L  F
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCF 747



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 249/512 (48%), Gaps = 11/512 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V S+N +L+ L +    D  L           PNL TYNI+I+  CK G++    +  
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVR 432

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +  +   PN  T N ++  L    R+ +A ++F  L    C P+ +TY +LI GL R 
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A  L+E+M + N +I     PN V Y+++I    K G  +    ++ +M     +
Sbjct: 493 GRVDEAYKLYEQMLDAN-QI-----PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD++  N+ +  +  A +  + + LF E+ + G  P   ++ +++  L K     EA  L
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              M ++G   +   YNT++DGFC  GK+N+A +L   M++ G +   V+Y  +I+G  K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++EA  L+ E  SKGI+  VV Y++L  G  ++ +++ A  + +E+ + G+  +  T
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           +   +D L K   I EA+  F++++ LKC  +   Y+ LI GLCK  +   A+  +  + 
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                PNV TY  MI GL   G + +A  LF   +E     D   ++ +I G    N  S
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRAS 846

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               L  + + K          +++D L K E
Sbjct: 847 DAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 193/404 (47%), Gaps = 15/404 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYN 100
           +EA+ +++ ML  +  P  V  +  L+ +  K       +K Y+  L   G  P+L   N
Sbjct: 496 DEAYKLYEQMLDANQIPNAVV-YTSLIRNFFKCGRKEDGHKIYNEMLR-LGCSPDLLLLN 553

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
             ++C  K G +  G   F  I    F P+A ++  LI GL       EA  LF  +K  
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           GC  +   YNT+I+G C++G    A  L EEM     E      P  VTY ++IDGL K 
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVVTYGSVIDGLAKI 667

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             +D+A  LF + K + I  +VV Y+SLI G       +EA  +  E+M +G+ P+V T+
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N ++D L K  ++ EA      M      PN  TY+ L+ G C + K N+A   +  M+ 
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G K +  +Y  +I+G  K   + EA +L+ +   KG       YN +  GL   ++   
Sbjct: 788 QGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASD 847

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           A +LF+E +  G +  T+T    +D L K   I +A  +   LR
Sbjct: 848 AYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 181/398 (45%), Gaps = 9/398 (2%)

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            YN+L+  + RT        + EEM+  G G       P+  T   I+    K   + +A
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFG-------PSNNTCIEIVLSFIKSRKLREA 184

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 M+     P    Y +LI  L  + D +    LF +M + G   +V  F  ++  
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             +  ++D A  LLD M    + P+   YN  +D F   GK++ A + F  M++ G   D
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLD 304

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           DV+Y  +I   CK   + EA+ L+  M      P    YNT+ +G     + E A  L +
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLE 364

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
             +R G      +Y   +  L + G + EA++ F  ++      ++  YN +ID LCK+G
Sbjct: 365 RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAG 423

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +L+ A  +  ++    L PNV+T NIM+  LC   ++D A  +F  ++     PD +T+ 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            LI G  R     +  +L  +M +   +P+A + + ++
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 78/186 (41%)

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            YN+L + +    +     ++ +EM   G      T    +    K+  + EA    +T+
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           R LK      AY  LI  L  S        LF  +       NV  +  +I+    +G++
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A  L  +M+ N+  PDV+ +++ I  F +  +     +  H+MK   ++ D    + +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 564 VDLLVK 569
           + +L K
Sbjct: 312 IGVLCK 317


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 267/525 (50%), Gaps = 12/525 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNIL 102
           NEA  +F++M +    P   +   +++      K  D      R    G  P++ +YN +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++C  + G+V      F  + +    PN +T+N +I  L    ++  A  +   +K  G 
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PNVIT N +++ LC+      A ++FE + +        C+P+ VTY ++I+GL + G 
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEGLGRHGR 494

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD+A  L+ QM D N  P+ V Y SLI          +  +++ EM+  G  P ++  N 
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            MD + K  ++++   L   +   G  P+A +Y  L+ G    G  + A ELF +M+  G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  D  +YN +I+G+CK+ +V +A  L  EM +KG +PTVVTY ++  GL +I +++ A 
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF+E +  G+  +   Y++ IDG  K G I EA  +   L       ++  +NCL+D L
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K+  +  A   F S+      PN +TY+I+I GLC   + +KA   + +M++    P+V
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            T+  +I G  +     + + L  K KEK  + D++I + +++ L
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 273/567 (48%), Gaps = 37/567 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EAF     M ++   P   S++  L+ +L+ ++  D       ++   G   N++ +  L
Sbjct: 183 EAFTFIQTMRKLKFRPA-FSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTL 241

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  F + GRV         +  +   P+   +N  I       ++  A   F ++KA G 
Sbjct: 242 IRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGL 301

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMAN---------------GNGEIGVV----- 202
             + +TY ++I  LC+      A+ LFE M                 G G  G       
Sbjct: 302 VLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYS 361

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C P+ V+Y+ I+  L ++G VD+A   F +MK + I P++ TYN +I  LC
Sbjct: 362 LLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLC 420

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A     A  +   M D G+ P+V+T N+++D LCK +++D+A  + + +  +  RP+A 
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY +L++G    G+++ A +L+  M       + V Y  LI  + K    E+   +Y EM
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +  G  P ++  NT    +F+  ++E    LF E++  G   D R+YT  I GL K G+ 
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFA 600

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA ELF T++   C LD +AYN +IDG CKSG++  A++L   +      P VVTY  +
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I GL    ++D+A  LF + +      +V+ +  LI GF ++    +   ++ ++ +K +
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSF 580
            P+    + ++D LVK E   ++L  F
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCF 747



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 249/512 (48%), Gaps = 11/512 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V S+N +L+ L +    D  L           PNL TYNI+I+  CK G++    +  
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVR 432

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +  +   PN  T N ++  L    R+ +A ++F  L    C P+ +TY +LI GL R 
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A  L+E+M + N +I     PN V Y+++I    K G  +    ++ +M     +
Sbjct: 493 GRVDEAYKLYEQMLDAN-QI-----PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD++  N+ +  +  A +  + + LF E+ + G  P   ++ +++  L K     EA  L
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              M ++G   +   YNT++DGFC  GK+N+A +L   M++ G +   V+Y  +I+G  K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++EA  L+ E  SKGI+  VV Y++L  G  ++ +++ A  + +E+ + G+  +  T
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           +   +D L K   I EA+  F++++ LKC  +   Y+ LI GLCK  +   A+  +  + 
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                PNV TY  MI GL   G + +A  LF   +E     D   ++ +I G    N  S
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRAS 846

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               L  + + K          +++D L K E
Sbjct: 847 DAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 193/404 (47%), Gaps = 15/404 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYN 100
           +EA+ +++ ML  +  P  V  +  L+ +  K       +K Y+  L   G  P+L   N
Sbjct: 496 DEAYKLYEQMLDANQIPNAVV-YTSLIRNFFKCGRKEDGHKIYNEMLR-LGCSPDLLLLN 553

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
             ++C  K G +  G   F  I    F P+A ++  LI GL       EA  LF  +K  
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           GC  +   YNT+I+G C++G    A  L EEM     E      P  VTY ++IDGL K 
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVVTYGSVIDGLAKI 667

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             +D+A  LF + K + I  +VV Y+SLI G       +EA  +  E+M +G+ P+V T+
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N ++D L K  ++ EA      M      PN  TY+ L+ G C + K N+A   +  M+ 
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G K +  +Y  +I+G  K   + EA +L+ +   KG       YN +  GL   ++   
Sbjct: 788 QGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASD 847

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           A +LF+E +  G +  T+T    +D L K   I +A  +   LR
Sbjct: 848 AYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 181/398 (45%), Gaps = 9/398 (2%)

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            YN+L+  + RT        + EEM+  G G       P+  T   I+    K   + +A
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFG-------PSNNTCIEIVLSFIKSRKLREA 184

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 M+     P    Y +LI  L  + D +    LF +M + G   +V  F  ++  
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             +  ++D A  LLD M    + P+   YN  +D F   GK++ A + F  M++ G   D
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLD 304

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           DV+Y  +I   CK   + EA+ L+  M      P    YNT+ +G     + E A  L +
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLE 364

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
             +R G      +Y   +  L + G + EA++ F  ++      ++  YN +ID LCK+G
Sbjct: 365 RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAG 423

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +L+ A  +  ++    L PNV+T NIM+  LC   ++D A  +F  ++     PD +T+ 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            LI G  R     +  +L  +M +   +P+A + + ++
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 78/186 (41%)

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            YN+L + +    +     ++ +EM   G      T    +    K+  + EA    +T+
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           R LK      AY  LI  L  S        LF  +       NV  +  +I+    +G++
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A  L  +M+ N+  PDV+ +++ I  F +  +     +  H+MK   ++ D    + +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 564 VDLLVK 569
           + +L K
Sbjct: 312 IGVLCK 317


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/503 (31%), Positives = 256/503 (50%), Gaps = 44/503 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+L+ YN LIN  CK G++      F  +      PN  T++ LI       ++  A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVT 209
                K+   G +  V  Y++LI+G C+ G    A +LF+EM ANG        KPN V 
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG-------LKPNVVI 462

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+++I G CKEG +  A  L+ +M  + I+P+  T+ +LI GLCHAN   EA +LF EM+
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +  V P+ VT+NV+++  CK      A  LLD MV++G+ P+  TY  L+ G C  G+++
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A E    ++    K +++ ++ L++GYCK   +++AL   REM+ +G+   +V Y+ L 
Sbjct: 583 EAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLI 642

Query: 390 LGLF-------------EIHQ----------------------VEHALKLFDEMQRDGVA 414
            G+              ++H                       ++ A  L+D M  +G  
Sbjct: 643 YGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCL 702

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  TYT  I+GLCK G + +A  L R +       +   Y C +D L   G ++ A +L
Sbjct: 703 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 762

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              L  G L  N VTYNI+I+G C  G++ +A ++ ++M ++  +PD I++  +I+ + R
Sbjct: 763 HDVLLEGFLA-NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 821

Query: 535 INEPSKVNELLHKMKEKKVMPDA 557
             +  +  +L   M  + V PD 
Sbjct: 822 RGDLKEAIKLWESMLNRGVNPDT 844



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 156/507 (30%), Positives = 253/507 (49%), Gaps = 12/507 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + + + +L  L + + +   L+      ++GL P++Y Y  ++   C++         
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            GR+  S    + AT+N  I+GL    R+ EA  +   L   G   +V TY TL+ GLC+
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                      EEM N   E G V  P+    S ++DGL K+G +  A  L  ++K   +
Sbjct: 298 VEE----FEAGEEMMNEMIEFGFV--PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P +  YN+LI+ +C     +EA+ LF  M  +G+ P+ VT+++++D  CK  K+D A  
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L  M + G++     Y++L+ G C +GK+  A+ LF  M + G K + V Y  LI+GYC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  E+  A  LY EM  KGI P   T+  L  GL   +++  A KLF EM    V  +  
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I+G CK G  + A EL   +       D   Y  LI GLC +GR+  A E    L
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  N + ++ ++ G C +G++D A D   +M     A D++ + +LI+G +R  + 
Sbjct: 592 QGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDR 651

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD 565
             + +LL +M ++ + PD  + + ++D
Sbjct: 652 RSIIDLLKQMHDQGLRPDNVLYTTMID 678



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 239/507 (47%), Gaps = 12/507 (2%)

Query: 67  VSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V+++N+ +  L KN+           L+  GL  ++ TY  L+   CK+     G     
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++   F P+ A  ++L+ GL  +  I  A  L  K+K FG  P++  YN LIN +C+ G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A +LF  M    G  G+   PN VTYS +ID  CK G +D A     +M +  I  
Sbjct: 370 KLDEAESLFNNM----GHKGLF--PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V  Y+SLI G C       AK LF EM+  G++P+VV +  ++   CK  ++  A RL 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  +G+ PN  T+  L+ G C   ++  A +LFG M       ++V+YN+LI G+CK 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
                A  L  EMV KG+ P   TY  L  GL    +V  A +  +++Q +    +   +
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCF 603

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  + G CK G + +A++  R +      +D+  Y+ LI G+ +    +   +L   +  
Sbjct: 604 SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD 663

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+ V Y  MI      G +  A  L+  M      P+V+T+  LI+G  +I    K
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
              L  +M     +P+ +  +  +D L
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYL 750



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 149/458 (32%), Positives = 232/458 (50%), Gaps = 7/458 (1%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           L  L   K     + A GL PN+  Y  LI+ +CK G +   F  +  +     +PN  T
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F +LI GL   +R+ EA  LF ++  +   PN +TYN LI G C+ G+T+ A  L +EM 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
               E G+V  P+T TY  +I GLC  G V +A+     ++ E    + + +++L+HG C
Sbjct: 558 ----EKGLV--PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYC 611

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                ++A     EM+ +GV   +V ++V++  + + +       LL  M  +G+RP+  
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            Y T++D     G +  A  L+  M S GC  + V+Y  LING CK   +++A  L REM
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 731

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           ++    P   TY      L     +E A++L D +  +G  A+T TY   I G CK G I
Sbjct: 732 LASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRI 790

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA E+   +       D  +Y+ +I   C+ G LK A +L+ S+ +  + P+ V YN +
Sbjct: 791 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 850

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           I G C  G++ KA +L  DM      P+  T++ LIHG
Sbjct: 851 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 224/460 (48%), Gaps = 6/460 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           F     +++LI  + +  R   G +    ++     P   T + ++ GL    +   A  
Sbjct: 142 FSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALH 201

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           LF ++ + G  P+V  Y  ++  LC     + A  +   M +        C  +  TY+ 
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG------CDLSVATYNV 255

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            I GLCK   V +A  +   +  + +  DV TY +L+ GLC   ++   + +  EM++ G
Sbjct: 256 FIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             PS    + ++D L K   +  A  L++ + + GV P+   YN L++  C  GK++ AE
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            LF +M   G   +DV+Y+ILI+ +CK  +++ AL    +M   GIK TV  Y++L  G 
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            ++ ++  A  LFDEM  +G+  +   YT+ I G CK G +  A  L+  +       + 
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             +  LI GLC + R+  A +LF  +    ++PN VTYN++I+G C +G   +A +L  +
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           M E    PD  T+  LI G       S+  E ++ ++ ++
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 211/442 (47%), Gaps = 6/442 (1%)

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F +F    R C       F+ LI+      R ++   +   +   G  P + T + ++NG
Sbjct: 130 FESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNG 189

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L R     +AL+LF+E+ +         +P+   Y+ ++  LC+     +A+ +  +M+ 
Sbjct: 190 LIRIRQFRMALHLFDEIVSSG------LRPDVYVYTAVVRSLCELKDFIRAREVIGRMES 243

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
              +  V TYN  I GLC      EA  +   +  +G++  V T+  ++  LCK  + + 
Sbjct: 244 SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEA 303

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
              +++ M++ G  P+    + L+DG    G I  A +L   ++  G       YN LIN
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             CK+ +++EA SL+  M  KG+ P  VTY+ L     +  +++ AL    +M   G+ A
Sbjct: 364 SMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
               Y++ I G CK G +  A  LF  +     + ++  Y  LI G CK G L  A+ L+
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + PN  T+  +I GLC+  +M +A  LF +M E    P+ +T+++LI G  + 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 536 NEPSKVNELLHKMKEKKVMPDA 557
               +  ELL +M EK ++PD 
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDT 565



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 187/402 (46%), Gaps = 42/402 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P   +F  L++ L    H +    A  LF         PN  TYN+LI   CK G     
Sbjct: 493 PNTYTFTALISGLC---HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F     ++     P+  T+  LI GL +  R+ EA      L+    + N + ++ L++G
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHG 609

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVC-----------------------------KPN 206
            C+ G    AL+   EM      + +VC                             +P+
Sbjct: 610 YCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD 669

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+T+ID   K G +  A  L+  M  E   P+VVTY +LI+GLC     ++A+ L  
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR 729

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+     P+  T+   +D L     +++A +L D++++ G   N  TYN L+ GFC +G
Sbjct: 730 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLG 788

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I  A E+  +M   G   D +SY+ +I  YC+  +++EA+ L+  M+++G+ P  V YN
Sbjct: 789 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 848

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
            L  G     ++  A +L D+M R GV  +  TY + I G C
Sbjct: 849 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 155/335 (46%), Gaps = 35/335 (10%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           MMD G+ P + T + +++ L + R+   A  L D +V  G+RP+   Y  ++   C +  
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
             RA E+ G MES GC     +YN+ I G CKN+ V EA+ +   +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L LGL ++ + E   ++ +EM   G        +  +DGL K G I  A +L   ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD--- 504
               +  YN LI+ +CK G+L  A  LF ++ H  L PN VTY+I+I   C  G++D   
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 505 --------------------------------KARDLFLDMEENAAAPDVITFDMLIHGF 532
                                            A+ LF +M  N   P+V+ +  LI G+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +  E      L H+M  K + P+    + ++  L
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 129/248 (52%), Gaps = 7/248 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +++  GL P+   Y  +I+   K G + + F  +  ++     PN  T+ +LI GL    
Sbjct: 660 QMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIG 719

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            + +A  L  ++ A    PN  TY   ++ L   G+   A+ L + +  G          
Sbjct: 720 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEG-------FLA 772

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           NTVTY+ +I G CK G + +A  + + M D  I+PD ++Y+++I+  C   D  EA +L+
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+++GV P  V +N ++   C   ++ +A  L D M++RGV+PN  TYN+L+ G CLM
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLM 892

Query: 326 GKINRAEE 333
             ++   +
Sbjct: 893 SSVSSTAD 900



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 100/217 (46%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++NG  + ++   AL L+ E+VS G++P V  Y  +   L E+     A ++   M+  G
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
                 TY  FI GLCKN  + EAVE+   L       D+  Y  L+ GLCK    +   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           E+   +     VP+    + ++ GL   G +  A DL   +++   AP +  ++ LI+  
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  +   L + M  K + P+    SI++D   K
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 54/120 (45%)

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I+  + +++GL +  + + A  LF  +    L P+V  Y  +++ LC      +AR++  
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            ME +     V T+++ I G  +     +  E+ + +  K +  D      +V  L K E
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 249/485 (51%), Gaps = 16/485 (3%)

Query: 54  FDYMLRMHPSP--PPVSSFNILLASL-AKNKHYDTRLNATGLFPNLYTYNILINCFCKIG 110
            D  LR+  S   P   +   L+  L A  +  + R       P++  YN ++  +C  G
Sbjct: 81  LDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAG 140

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           ++     A   +      P+A T+N+LI+GL    R   A A+  ++    C P+V+TY 
Sbjct: 141 QLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT 197

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            L+   C+      A+ L +EM +        C P+ VTY+ +++G+C+EG VD A    
Sbjct: 198 ILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFL 251

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             +      P+ V+YN ++ GLC A  W +A+ L  EM  +G  P+VVTFN+++  LC+ 
Sbjct: 252 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 311

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
             ++ A  +L+ + + G  PN+ +YN L+  FC   K+++A      M S GC  D VSY
Sbjct: 312 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N L+   C++ EV+ A+ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM  
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+  D  TY+T   GLC+   I +A+  F  ++ +    +   YN +I GLCK      
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +LF  +     +PN  TY I+I+GL  +G + +ARDL  ++     +  V+   ++  
Sbjct: 492 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL----CSRGVVRKSLINK 547

Query: 531 GFIRI 535
           G IR+
Sbjct: 548 GAIRL 552



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/496 (30%), Positives = 247/496 (49%), Gaps = 16/496 (3%)

Query: 74  LASLAKNKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           L SL +    D   RL  +   P+  T   LI      GR +       R+L +C  P+ 
Sbjct: 72  LRSLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEAR----RVLAAC-GPDV 126

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
             +N+++ G     ++  A  L  ++     EP+  TYNTLI GLC  G T  AL + +E
Sbjct: 127 MAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDE 183

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M          C P+ VTY+ +++  CK     +A  L  +M+D+   PD+VTYN +++G
Sbjct: 184 MLRRR------CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 237

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           +C     ++A      +   G +P+ V++N+++  LC   + ++A  L+  M Q+G  PN
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             T+N L+   C  G +  A E+   +   GC  + +SYN L++ +CK K++++A++   
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            MVS+G  P +V+YNTL   L    +V+ A++L  +++  G A    +Y T IDGL K G
Sbjct: 358 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
              EA+EL   +     + DI  Y+ +  GLC+  R++ A   F  +    + PN V YN
Sbjct: 418 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 477

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I GLC   +   A DLF  M  N   P+  T+ +LI G        +  +LL ++  +
Sbjct: 478 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 537

Query: 552 KVMPDASIVSIVVDLL 567
            V+  + I    + LL
Sbjct: 538 GVVRKSLINKGAIRLL 553



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 198/409 (48%), Gaps = 14/409 (3%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  T   LI  L  +G T  A  +              C P+ + Y+ ++ G C  G 
Sbjct: 93  RPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMVAGYCGAGQ 141

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A+ L  +M    + PD  TYN+LI GLC       A  +  EM+ +   P VVT+ +
Sbjct: 142 LDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 198

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  CK     +A +LLD M  +G  P+  TYN +++G C  G+++ A E   ++ S G
Sbjct: 199 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 258

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C+ + VSYNI++ G C  +  E+A  L  EM  KG  P VVT+N L   L     VE AL
Sbjct: 259 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 318

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++ +++ + G   ++ +Y   +   CK   + +A+     +    C  DI +YN L+  L
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 378

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+SG +  A EL   L      P +++YN +I GL   G+  +A +L  +M      PD+
Sbjct: 379 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 438

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           IT+  +  G  R +          K+++  + P+  + + ++  L K  
Sbjct: 439 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 487


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 270/539 (50%), Gaps = 14/539 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  IF+ M   + + P   ++N ++        +D       R  A G  P++  YN 
Sbjct: 320 DEAVEIFEQM-EQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++ C  K GR+      F  + +    PN +T+N LI  L     +  A  +   +K  G
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV+T N +I+ LC+      A ++FE M +       +C P+ VT+ ++IDGL K+G
Sbjct: 438 LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK------ICSPDEVTFCSLIDGLGKQG 491

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A  L+ QM D +  P+ V Y SLI          +  ++F EM+ +G  P +   N
Sbjct: 492 RVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLN 551

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             MD + K  +  +   L + +  RG  P+  +Y+ L+ G    G      ELF +M+  
Sbjct: 552 AYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ 611

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D  +YN  I+G+CK+ +V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 612 GCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA 671

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF+E + +G+  +   Y++ IDG  K G I EA  +   L       ++  +NCL+D 
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L K+  +  A   F ++ +    PN +TY+I+I GLC   + +KA   + +M++    P+
Sbjct: 732 LVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPN 791

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            IT+  +I G  +    ++ + L  + K    +PD++  + +++ L  +  ++++   F
Sbjct: 792 TITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIF 850



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/572 (27%), Positives = 272/572 (47%), Gaps = 30/572 (5%)

Query: 7   CNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPP 66
           C R F F  A               F   TT  G ++ +  ++      + ++       
Sbjct: 188 CMRKFKFRPA---------------FSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVS 232

Query: 67  VSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  F  ++   A+    D  L+      +  L  ++  YN+ I+CF K G+V + +  F 
Sbjct: 233 VHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFH 292

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            I      P+  T+ S+I  L   +R+ EA  +F +++     P    YNT+I G    G
Sbjct: 293 EIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAG 352

Query: 181 HTMIALNLFE-EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
               A +L E + A G       C P+ + Y+ I+  L K+G + +A   F +MK ++  
Sbjct: 353 KFDEAYSLLERQKARG-------CIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAA 404

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P++ TYN LI  LC A +   A ++   M + G+ P+V+T N+++D LCK +K+DEA  +
Sbjct: 405 PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSI 464

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            + M  +   P+  T+ +L+DG    G+++ A  L+  M       + V Y  LI  + K
Sbjct: 465 FEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFK 524

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
               E+   +++EM+ +G  P +   N     +F+  +      LF+E++  G   D  +
Sbjct: 525 CGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMS 584

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y+  I GL K G+  E  ELF  ++   C LD  AYN  IDG CKSG++  A++L   + 
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                P VVTY  +I GL    ++D+A  LF + + N    +V+ +  LI GF ++    
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRID 704

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +   ++ ++ +K + P+    + ++D LVK E
Sbjct: 705 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 736



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 244/501 (48%), Gaps = 7/501 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + GL P+  TY  +I   CK  R+      F ++ ++   P A  +N++I G  +  +
Sbjct: 294 IKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGK 353

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA +L  + KA GC P+VI YN ++  L + G    AL  FEEM            PN
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-------PN 406

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ +ID LCK G V+ A  +   MK+  + P+V+T N +I  LC A   +EA  +F 
Sbjct: 407 LSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFE 466

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M  +   P  VTF  ++D L K  ++D+A RL + M+     PNA  Y +L+  F   G
Sbjct: 467 GMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCG 526

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +     ++F  M   GC  D    N  ++   K  E  +  +L+ E+ S+G  P V++Y+
Sbjct: 527 RKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYS 586

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GL +        +LF  M+  G   DT  Y TFIDG CK+G + +A +L   ++  
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK 646

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +  +  Y  +IDGL K  RL  A+ LF       L  NVV Y+ +I G    G++D+A
Sbjct: 647 GRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEA 706

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +  ++ +    P+V T++ L+   ++  E ++       MK  K  P+    SI+++ 
Sbjct: 707 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILING 766

Query: 567 LVKNEISLKSLPSFLVQERQG 587
           L +     K+   +   ++QG
Sbjct: 767 LCRVRKFNKAFVFWQEMQKQG 787



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 214/423 (50%), Gaps = 13/423 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT--RLNATGL----FPNLYTYNI 101
           +EA  IF+ M     SP  V+ F  L+  L K    D   RL    L     PN   Y  
Sbjct: 459 DEACSIFEGMNHKICSPDEVT-FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTS 517

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  F K GR   G   F  ++    +P+    N+ +  +       +  ALF ++K+ G
Sbjct: 518 LIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRG 577

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+V++Y+ LI+GL + G       LF  M          C  +T  Y+T IDG CK G
Sbjct: 578 FIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG------CVLDTHAYNTFIDGFCKSG 631

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V+KA  L  +MK +   P VVTY S+I GL   +  +EA  LF E    G++ +VV ++
Sbjct: 632 KVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYS 691

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K  ++DEA  +++ ++Q+G+ PN  T+N L+D      +IN A   F +M+++
Sbjct: 692 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNL 751

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               + ++Y+ILING C+ ++  +A   ++EM  +G+KP  +TY T+  GL +   +  A
Sbjct: 752 KGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEA 811

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF+  + +G   D+ +Y   I+GL  +   +EA ++F   R+  C +  +    L+D 
Sbjct: 812 SSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDA 871

Query: 462 LCK 464
           L K
Sbjct: 872 LQK 874



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 187/402 (46%), Gaps = 11/402 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-----TRLNATGLFPNLYTYNIL 102
           ++A+ +++ ML     P  V   +++ +     +  D       +   G  P+L   N  
Sbjct: 494 DDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAY 553

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++C  K G    G   F  I    F P+  +++ LI GL       E   LF  +K  GC
Sbjct: 554 MDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGC 613

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             +   YNT I+G C++G    A  L EEM     +      P  VTY ++IDGL K   
Sbjct: 614 VLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQ------PTVVTYGSVIDGLAKIDR 667

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A  LF + K   +  +VV Y+SLI G       +EA  +  E+M +G+ P+V T+N 
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D L K  +++EA      M      PN  TY+ L++G C + K N+A   +  M+  G
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K + ++Y  +I G  K   + EA SL+    + G  P   +YN +  GL    +   A 
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY 847

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           K+F+E +  G    T+T    +D L K+  + +A  +   LR
Sbjct: 848 KIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLR 889



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 176/387 (45%), Gaps = 5/387 (1%)

Query: 184 IALNLFEEMANGNGEIGVVC-KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           +  + FE++    GE+ +    P+T T   +I    K   + +   L   M+     P  
Sbjct: 142 VKFDYFEQIL---GEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAF 198

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             Y +LI  L    + +    LF +M + G + SV  F  ++    +  ++D A  LLD 
Sbjct: 199 SAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDE 258

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M    +  +   YN  +D F   GK++ A + F  ++S G   DDV+Y  +I   CK   
Sbjct: 259 MKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNR 318

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           ++EA+ ++ +M      P    YNT+ +G     + + A  L +  +  G       Y  
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            +  L K G + EA+  F  ++      ++  YN LID LCK+G ++ A+++  ++    
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAG 437

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L PNV+T NIMI  LC   ++D+A  +F  M     +PD +TF  LI G  +        
Sbjct: 438 LFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAY 497

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
            L  +M +   +P+A + + ++    K
Sbjct: 498 RLYEQMLDSDKIPNAVVYTSLIKSFFK 524



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 172/408 (42%), Gaps = 24/408 (5%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTV---------TYSTIIDGLCKEGF------------V 223
           AL+LF E    +  IGV+ +   V         T       LC E +             
Sbjct: 85  ALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKF 144

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D  + +  +M      P   T   LI     +N   E   L   M     +P+   +  +
Sbjct: 145 DYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTL 204

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L   ++ D    L   M + G   +   + T++  F   G+++ A  L   M+S  C
Sbjct: 205 IGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKS-NC 263

Query: 344 KHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            H D V YN+ I+ + K  +V+ A   + E+ S G+ P  VTY ++   L + ++++ A+
Sbjct: 264 LHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAV 323

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++F++M+++        Y T I G    G   EA  L    +   C   + AYNC++  L
Sbjct: 324 EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL 383

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K GRL  A   F  +      PN+ TYN++I  LC  G+++ A  +   M+E    P+V
Sbjct: 384 GKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNV 442

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +T +++I    +  +  +   +   M  K   PD      ++D L K 
Sbjct: 443 MTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQ 490


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 245/481 (50%), Gaps = 9/481 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N YT N L+  F   G     +  F   L + F P+  T+ +LI+G     +I +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++KA G  P ++T+ +LI  LC    T  AL +F +M      I +  KP+   Y
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQM------IDMKVKPDAFLY 125

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I  LCK   +D A + F +M      PD VTY  L+H L  A  W +  ++F EM+ 
Sbjct: 126 TVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLS 185

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P +VT+  +++  CK  ++D+A  L+  +   G  P+   Y+TL+DG C   + + 
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE 245

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ELF    + G   D + Y   I+G CK  +++EA +++ +M+  G  P  V+YN +  
Sbjct: 246 ARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIY 303

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA-VELFRTLRILKCE 449
            L + ++V  A +L D+             T  +DGLCK+  + EA V L R L      
Sbjct: 304 SLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRA 363

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  Y+ +IDGLCK+ RL  A+ +   +     VP+VVTY  +I   C  G++D+AR+L
Sbjct: 364 PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAREL 423

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  M E   A DV+ +++LI G+ R  +  +   ++ +M  + + P+   +S +VD L K
Sbjct: 424 FQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCK 483

Query: 570 N 570
            
Sbjct: 484 E 484



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 220/421 (52%), Gaps = 18/421 (4%)

Query: 23  SNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NK 81
           +  +  +V F  L  +  ++N    ++A  IF  M+ M   P     + +++  L K NK
Sbjct: 81  AGITPTIVTFGSLIRKLCELNFT--DKALQIFHQMIDMKVKPDAFL-YTVVIGHLCKINK 137

Query: 82  -----HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
                 Y  R+  +G  P+  TY +L++   K  +   G   F  +L    +P   T+ +
Sbjct: 138 LDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 197

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           ++ G     RI +A +L  +LK  G  P+   Y+TLI+GLC+      A  LF EMA G+
Sbjct: 198 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGD 256

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            +       + + Y++ I GLCK G +D+AKA+ ++M +    PD V+YN +I+ LC  N
Sbjct: 257 VQ-------DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR-PNACTY 315
             +EAK L  + M++   P V    V++D LCK+R+++EA  +L+ M++ G R P+  TY
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTY 369

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           + ++DG C   +++ A  +   M   GC  D V+Y  +I+ +CK   ++EA  L++ M  
Sbjct: 370 SAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 429

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G    VV YN L  G     +V+ A+ + +EM   G+  +  + +T +DGLCK   + E
Sbjct: 430 RGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEE 489

Query: 436 A 436
           A
Sbjct: 490 A 490



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 5/348 (1%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T NSL+    +     EA R+F + +    +P   T+  ++   CK  ++ +A  LL  M
Sbjct: 19  TCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G+ P   T+ +L+   C +   ++A ++F  M  M  K D   Y ++I   CK  ++
Sbjct: 79  KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + A S +  MV  G  P  VTY  L   LF+  + E   ++F+EM   G + +  TY T 
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATV 198

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ++G CK G I +A+ L R L+          Y+ LIDGLCK  R   A ELF  +  G  
Sbjct: 199 VNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAAGD- 256

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           V +V+ Y   I GLC  G++D+A+ + + M E   APD ++++++I+   + N  S+  E
Sbjct: 257 VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 316

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
           L+ +  E+K MP   + +++VD L K   S +   + ++ ER  E G+
Sbjct: 317 LMDQAMERKCMPGVPVCTVLVDGLCK---SRRVEEACVILERMLETGD 361



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 112/230 (48%)

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G +H+  + N L+  +  +    EA  ++++ +    +P   TY TL  G  +  Q+  A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           + L  EM+  G+     T+ + I  LC+  +  +A+++F  +  +K + D   Y  +I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LCK  +L  A   F  +     +P+ VTY +++  L    + ++   +F +M     +P+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++T+  +++G+ +     +   L+ ++K     P  S+ S ++D L K++
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 69/160 (43%)

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R G   +T T  + ++    +G   EA  +F+   +     D   Y  LI G CK+ ++ 
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  L   +    + P +VT+  +I+ LC     DKA  +F  M +    PD   + ++I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               +IN+         +M +   +PD    +++V  L K
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 259/485 (53%), Gaps = 7/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++N  G+ PN  TY ++I   CK G +   +  + ++     +P     NSLI+G     
Sbjct: 354 KMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKAR 413

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
              EA+ LF +  A G   NV TYN+L++ LC+ G    A +++E+M       GV  +P
Sbjct: 414 SPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRK----GV--RP 466

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + V+Y+ +I G C++G +D A  +F++M ++ + P+++TY+ L+ G     D   A  L+
Sbjct: 467 SVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLY 526

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M  + + PS  T N+I++ LCK  +  E+   L  +VQ G  P   TYN ++DGF   
Sbjct: 527 DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G +N A  ++  M  +G   +  +Y  LING+CK+  ++ AL +  EM +KGI+  V  Y
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G      + +A +L  E+Q  G++ +   Y++ I G  K   +  A+ L + +  
Sbjct: 647 CALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMIN 706

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D+Q Y  LI GL K G+L FA EL+  +    ++P+++TY+++I GLCN GQ++ 
Sbjct: 707 EGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLEN 766

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A+ +  DM+     P V  ++ LI G  +     +   L ++M +K ++PD +   I+V+
Sbjct: 767 AQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826

Query: 566 LLVKN 570
             VK+
Sbjct: 827 GKVKD 831



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 214/409 (52%), Gaps = 6/409 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N++TYN L++  CK G++S     + +++R    P+  ++N++I G   +  +  A  +F
Sbjct: 432 NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVF 491

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++   G +PN+ITY+ L++G  + G T  A  L++ M   N        P+  T + II
Sbjct: 492 VEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN------IAPSDFTCNIII 545

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +GLCK G   +++    ++  E   P  +TYN +I G       N A  ++ EM   GV 
Sbjct: 546 NGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVS 605

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+V T+  +++  CK+  MD A +++D M  +G+  +   Y  L+DGFC  G +  A +L
Sbjct: 606 PNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQL 665

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ++ +G   + V Y+ +I+G+ K + +E AL L++ M+++GI   +  Y TL  GL +
Sbjct: 666 LSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLK 725

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++  A +L+ EM   G+  D  TY+  I GLC  G +  A ++   +        +  
Sbjct: 726 EGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFI 785

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           YN LI G  K G L+ A+ L   +    LVP+  TY+I++ G   DG +
Sbjct: 786 YNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 192/389 (49%), Gaps = 11/389 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNIL 102
           +EA  I++ M+R    P  VS  N++L    +            +   GL PNL TY++L
Sbjct: 450 SEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVL 509

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ + K G     F  + R+      P+  T N +I GL    R  E+     KL   G 
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P  +TYN +I+G  + G    AL ++ EM     +IGV   PN  TY+ +I+G CK   
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMC----KIGV--SPNVFTYTNLINGFCKSNN 623

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D A  +  +MK++ I  DV  Y +LI G C   D   A +L  E+ + G+ P+ V ++ 
Sbjct: 624 MDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSS 683

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++    K + M+ A  L   M+  G+  +   Y TL+ G    GK+  A EL+  M + G
Sbjct: 684 MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG 743

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++Y++LI+G C   ++E A  +  +M  K + PTV  YNTL  G F+   ++ A 
Sbjct: 744 IMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAF 803

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           +L +EM   G+  D  TY   ++G  K+G
Sbjct: 804 RLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 250/566 (44%), Gaps = 30/566 (5%)

Query: 8   NRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           N +F   SAP S  + +F +   +   L   + D     P  A   F +  +       V
Sbjct: 46  NTNFPGKSAPTS--QDSFLTQTQYIDTLLNHQND-----PQSALSYFTWASQKRGLIKSV 98

Query: 68  SSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC- 126
            +  +LL  L K+          G   NL      +N F       +  +   R++ S  
Sbjct: 99  DALCVLLHILTKSTE------TCGKARNL------LNRFASDDWGPVPSVVVARLIESSR 146

Query: 127 ---FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
              F  ++  FN L+       RI +A   F  L      P +   N  ++ L +     
Sbjct: 147 RLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIR 206

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A +++ +MA+     GV  K +  T S +I    +EG +++A+  F + K++ +  D  
Sbjct: 207 EARDVYNKMASK----GV--KGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y+ +I  +C   D   A  L  EM D+G  P  V F  ++    K  KM EA ++   M
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +  G   N     TLM G+C  G ++ A ELF  M   G   ++V+Y ++I   CKN  +
Sbjct: 321 LSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNM 380

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A  +Y +M +K I PTV   N+L  G  +    E A KLFDE    G+ A+  TY + 
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSL 439

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +  LCK G + EA  ++  +        + +YN +I G C+ G +  A  +F  +    L
Sbjct: 440 LSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN++TY++++ G    G  + A  L+  M     AP   T +++I+G  +    S+  +
Sbjct: 500 KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQD 559

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
            L K+ ++  +P     + ++D  VK
Sbjct: 560 RLKKLVQEGFIPTCMTYNCIIDGFVK 585



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 2/238 (0%)

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L  S   +  + D   +N L+N Y K K + +A+  +  ++ K I P +   N     L 
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           + + +  A  ++++M   GV  D  T +  I    + G + EA   FR  +    ELD +
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC-NDGQMDKARDLFLD 512
           AY+ +I+ +CK      A  L   +     VP+ V +  +I G+C   G+M +A  +  +
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGE 319

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           M       +V+    L+ G+ +  +     EL  KM E  + P+    +++++   KN
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKN 377



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ P+L TY++LI+  C  G++         + R C TP    +N+LI G   E  + 
Sbjct: 741 AKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQ 800

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           EA  L  ++   G  P+  TY+ L+NG  + G+
Sbjct: 801 EAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%)

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
             L  + R L  E D + +N L++   K+ R+  A + F SL    +VP +   NI +  
Sbjct: 139 ARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSE 198

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L  +  + +ARD++  M       D  T  ++I   +R  +  +      + K K V  D
Sbjct: 199 LVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELD 258

Query: 557 ASIVSIVVDLLVKNEISLKSL 577
           A   SIV++ + K   S+ +L
Sbjct: 259 ARAYSIVIEAVCKKPDSVAAL 279


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 266/549 (48%), Gaps = 47/549 (8%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL----NATGLFPNLYTYNI 101
           +P+  + +F   L   P  P  S   + + S +K       L       G+ P++ + N+
Sbjct: 95  SPSHLYTLFS--LSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNL 152

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +       R       F  I+ S   P+   +   I+       +  A  L T +K  G
Sbjct: 153 FLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGG 212

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P V  YN +I GLC+      A  LF+EM +          PN +TY+T+IDG CK G
Sbjct: 213 VSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR------VAPNRITYNTLIDGYCKVG 266

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM------------- 268
            +++A  +  +MK EN+ P ++T+NSL++GLC A    EA+R+  EM             
Sbjct: 267 QLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYT 326

Query: 269 ----------------------MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
                                 + +GVQ    T +++++ LCK   M++A  +L   ++ 
Sbjct: 327 TLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLEN 386

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P    +NT+++G+C +G IN+A      ME++G + + V+YN L+  +C+ K +EEA
Sbjct: 387 GLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEA 446

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
               ++MV KG+ P V TYNTL  G       +   ++ +EM++ G+  +  +Y   I+ 
Sbjct: 447 EKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINC 506

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK+  I+EA  +   +       + Q YN LIDG C +G+LK A+  F  +    +VP 
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +VTYNI+I GLC  G++ +A +L  ++     + DVIT++ LI G+       K  EL  
Sbjct: 567 LVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYE 626

Query: 547 KMKEKKVMP 555
            MK+  + P
Sbjct: 627 TMKKSGIKP 635



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 252/499 (50%), Gaps = 15/499 (3%)

Query: 65  PPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V  +N+++  L K K        +D  L+   + PN  TYN LI+ +CK+G++   F 
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR-VAPNRITYNTLIDGYCKVGQLEEAFN 273

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              R+      P   TFNSL+ GL     + EA  +  +++ +G  P+  TY TL +G  
Sbjct: 274 IRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL 333

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G+   ++ L EE      +I         T S +++ LCKEG ++KA+ +  +  +  
Sbjct: 334 KCGNVDASITLSEEAVRKGVQI------LDYTCSILLNALCKEGNMEKAEEVLKKFLENG 387

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P  V +N++++G C   D N+A     +M   G++P+ VT+N ++ + C+ + M+EA 
Sbjct: 388 LAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAE 447

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           + +  MV++GV PN  TYNTL+DG+      +R  ++   ME  G K + +SY  LIN  
Sbjct: 448 KCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCL 507

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+  + EA  +  +MV +G+ P    YN L  G     +++ A + FDEM    +    
Sbjct: 508 CKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTL 567

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   I+GLCK G ++EA  L   +       D+  YN LI G   +G ++ A EL+ +
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + P + TY+ +I G C    +     ++ +M +    PD + ++ LIH ++   +
Sbjct: 628 MKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGD 686

Query: 538 PSKVNELLHKMKEKKVMPD 556
             K   L   M+ + + PD
Sbjct: 687 VQKACSLHSAMEAQGIQPD 705



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 211/441 (47%), Gaps = 6/441 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ A+ N  ++ L +  R  +   LF+++   G  P+   Y   I    + G    A+ L
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIEL 204

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              M  G    GV   P    Y+ +I GLCKE  +  A+ LF +M D  + P+ +TYN+L
Sbjct: 205 MTCMKRG----GV--SPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTL 258

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I G C      EA  +   M  + V+P+++TFN +++ LC+ + M+EA R+L+ M   G 
Sbjct: 259 IDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGF 318

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  TY TL DG    G ++ +  L       G +  D + +IL+N  CK   +E+A  
Sbjct: 319 VPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEE 378

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           + ++ +  G+ P  V +NT+  G  ++  +  A    ++M+  G+  +  TY + +   C
Sbjct: 379 VLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFC 438

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           +   + EA +  + +       +++ YN LIDG  +S      +++   +    L PNV+
Sbjct: 439 EMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVI 498

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +Y  +I  LC D  + +A  +  DM      P+   ++MLI G     +         +M
Sbjct: 499 SYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM 558

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
             ++++P     +I+++ L K
Sbjct: 559 VAREIVPTLVTYNILINGLCK 579



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 205/444 (46%), Gaps = 40/444 (9%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           YT +IL+N  CK G +        + L +   P    FN+++ G      I +A     K
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++A G  PN +TYN+L+   C   +   A    ++M     E GV+  PN  TY+T+IDG
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV----EKGVL--PNVETYNTLIDG 471

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
             +    D+   +  +M+ + + P+V++Y  LI+ LC   +  EA+ +  +M+ +GV P+
Sbjct: 472 YGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPN 531

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
              +N+++D  C   K+ +A R  D MV R + P   TYN L++G C  GK+  AE L  
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG----- 391
            +   G   D ++YN LI+GY     V++AL LY  M   GIKPT+ TY+ L  G     
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651

Query: 392 ---LFEIHQ---------------------VEH-----ALKLFDEMQRDGVAADTRTYTT 422
              + +I+Q                     VEH     A  L   M+  G+  D  TY  
Sbjct: 652 LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNC 711

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G  K G + +   L   ++I       + Y+ LI G CK      A+  +  +    
Sbjct: 712 LILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENG 771

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKA 506
             P+V   + +I GL  +G+   A
Sbjct: 772 FTPSVSICDNLITGLREEGRSHDA 795



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 201/421 (47%), Gaps = 41/421 (9%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P    +N ++N +C++G ++  +    ++      PN  T+NSL+K       + EA
Sbjct: 387 GLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEA 446

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                K+   G  PNV TYNTLI+G  R+        + EEM           KPN ++Y
Sbjct: 447 EKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG------LKPNVISY 500

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
             +I+ LCK+  + +A+ +   M    + P+   YN LI G C A    +A R F EM+ 
Sbjct: 501 GCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVA 560

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P++VT+N++++ LCK  K+ EA  L   + ++G+  +  TYN+L+ G+   G + +
Sbjct: 561 REIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQK 620

Query: 331 AEELFGSMESMGCKH----------------------------------DDVSYNILING 356
           A EL+ +M+  G K                                   D V YN LI+ 
Sbjct: 621 ALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHC 680

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           Y ++ +V++A SL+  M ++GI+P  +TYN L LG F+  ++     L ++M+  G+   
Sbjct: 681 YVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPK 740

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           T TY   I G CK      A   +R +        +   + LI GL + GR   A ++ C
Sbjct: 741 TETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDA-DVIC 799

Query: 477 S 477
           S
Sbjct: 800 S 800



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 214/439 (48%), Gaps = 7/439 (1%)

Query: 128 TPNAATFNSLIKGLHAESRIM-EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           TP    F+ ++  + +ES+++ E+A L+  +K  G  P+V + N  +  L  T      L
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            LF E+     E G+  +P+   Y   I    K G + +A  L   MK   ++P V  YN
Sbjct: 168 QLFSEIV----ESGL--RPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYN 221

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            +I GLC      +A++LF EM+D+ V P+ +T+N ++D  CK  +++EA  + + M   
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE 281

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            V P   T+N+L++G C    +  A+ +   ME  G   D  +Y  L +G+ K   V+ +
Sbjct: 282 NVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDAS 341

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           ++L  E V KG++    T + L   L +   +E A ++  +   +G+A     + T ++G
Sbjct: 342 ITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNG 401

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            C+ G I +A      +  +    +   YN L+   C+   ++ A +    +    ++PN
Sbjct: 402 YCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPN 461

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V TYN +I G       D+   +  +ME+    P+VI++  LI+   +     +   +L 
Sbjct: 462 VETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILG 521

Query: 547 KMKEKKVMPDASIVSIVVD 565
            M  + V+P+A I ++++D
Sbjct: 522 DMVHRGVVPNAQIYNMLID 540



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 169/354 (47%), Gaps = 13/354 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+    ++  +D        +   GL PN+ +Y  LINC CK   +    + 
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G ++     PNA  +N LI G     ++ +A   F ++ A    P ++TYN LINGLC+
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  M A NL  E+        V+      TY+++I G    G V KA  L+  MK   I
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVI------TYNSLISGYSSAGNVQKALELYETMKKSGI 633

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P + TY+ LI G C        ++++ EM+   + P  V +N ++    ++  + +A  
Sbjct: 634 KPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +G++P+  TYN L+ G    G++++ + L   M+  G      +Y+ILI G+C
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           K K+ + A   YREM   G  P+V   + L  GL E  +   A  +  EM   G
Sbjct: 753 KLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score = 39.7 bits (91), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/101 (20%), Positives = 49/101 (48%)

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           + EL+  +    ++P+V + N+ ++ L +  + +    LF ++ E+   PD   +   I 
Sbjct: 131 SAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQ 190

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +++ +  +  EL+  MK   V P   + ++V+  L K +
Sbjct: 191 AAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEK 231


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 244/484 (50%), Gaps = 6/484 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI+   + G        + R++     P+  T+++L+  L  + 
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
                  L  +++  G  PNV T+   I  L R G    A  +F  M +        C P
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG------CGP 295

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC  G ++ AK LF++MK     PD V Y +L+       D +  K  +
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M   G  P VVTF +++D LCK R  DEA    D+M ++G+ PN  TYNTL+ G    
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+I  A +L  +MES+G +    +Y   I+ + K+ E  +A+  + +M +KGI P +V  
Sbjct: 416 GRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L E+ ++  A  +F+ ++ +G+A D+ TY   +    K G + EAV L   +  
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             CE D+   N LID L K+GR+  AW++F  +    L P VVTYN ++ GL  +G++ K
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A +LF  M     +P+ I+F+ L+  F + +E     ++  KM      PD    + V+ 
Sbjct: 596 AIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 566 LLVK 569
            L+K
Sbjct: 656 GLIK 659



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 163/537 (30%), Positives = 269/537 (50%), Gaps = 44/537 (8%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K + +++ A G  P++ T+ IL++  CK       F  F  + +    PN  T+N+LI G
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L    RI +A  L   +++ G +P   TY T I+   ++G T  A+  FE+M       G
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK----G 467

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           +V  PN V  +  +  L + G + +AK +F  +++  + PD VTYN ++         +E
Sbjct: 468 IV--PNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  L  EM+  G +P V+  N ++D L K  ++DEA ++ D M    + P   TYNTL+ 
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G    G++ +A ELF SM    C  + +S+N L++ +CKN EVE AL ++ +M     KP
Sbjct: 586 GLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL- 439
            V+TYNT+  GL + ++V HA   F ++++  +  D  T  T + GL K G I +A+ + 
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIA 704

Query: 440 --------FRTLR----------ILKCELD---IQAYNCLIDG--------------LCK 464
                   FR  R          +++ E+D   I A   +++G              LCK
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764

Query: 465 SGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             R  +A+++F      + + P + +YN +I  L      +KA DLF DM+    APD  
Sbjct: 765 HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF 824

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           TF+ML+    +  + +++ EL  +M  ++  PDA   +IV+  L K+    K+L  F
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 251/485 (51%), Gaps = 9/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + GL P+L TY+ L+    K     +  +    +      PN  TF   I+ L    
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCK 204
           +I EA  +F ++   GC P+++TY  LI+ LC  G    A  LF +M ANG+       K
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH-------K 329

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V Y T++D     G +D  K  + QM+ +   PDVVT+  L+  LC A D++EA   
Sbjct: 330 PDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFAT 389

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  M  QG+ P++ T+N ++  L +  ++++A +LLD M   GV+P A TY T +D F  
Sbjct: 390 FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGK 449

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+  +A E F  M++ G   + V+ N  +    +   + EA +++  +   G+ P  VT
Sbjct: 450 SGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN +     ++ QV+ A+ L  EM R+G   D     + ID L K G + EA ++F  ++
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +K    +  YN L+ GL K GR++ A ELF S+      PN +++N ++   C + +++
Sbjct: 570 DMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVE 629

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  +F  M      PDV+T++ +I+G I+ N+ +      H++K K + PD   +  ++
Sbjct: 630 LALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLL 688

Query: 565 DLLVK 569
             LVK
Sbjct: 689 PGLVK 693



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 247/499 (49%), Gaps = 12/499 (2%)

Query: 74  LASLAKNKHYDTRLNA---TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
           LA + + +   T  N     GL P+  TYN+++ C+ K+G+V         ++R+   P+
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
               NSLI  L+   R+ EA  +F ++K     P V+TYNTL++GL + G    A+ LFE
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
            M      I   C PNT++++T++D  CK   V+ A  +F +M   +  PDV+TYN++I+
Sbjct: 602 SM------IXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA-SRLLDLMVQRGVR 309
           GL   N  N A   F   + + + P  VT   ++  L K  ++ +A S   D M Q   R
Sbjct: 656 GLIKENKVNHA-FWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            N   +  LM G  +  ++++A      +   G   +D     L+   CK+K    A  +
Sbjct: 715 VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774

Query: 370 YREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           + +   K GI PT+ +YN L   L E+H  E A  LF +M+  G A D  T+   +    
Sbjct: 775 FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+G I E  EL++ +   +C+ D   YN +I  L KS  L  A + F  L      P   
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY  +I GL   G++++A  LF +M +    P+   F++LI+G+ +I +     +L  +M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 549 KEKKVMPDASIVSIVVDLL 567
             + + PD    +I+VD L
Sbjct: 955 VNEGIRPDLKSYTILVDCL 973



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 264/542 (48%), Gaps = 50/542 (9%)

Query: 58   LRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGR 111
            LR +   P   ++N+++   +K    D  +N        G  P++   N LI+   K GR
Sbjct: 498  LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 112  VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            V   +  F R+     +P   T+N+L+ GL  E R+ +A  LF  +    C PN I++NT
Sbjct: 558  VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617

Query: 172  LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
            L++  C+     +AL +F +M   +      CKP+ +TY+T+I GL KE  V+ A   F 
Sbjct: 618  LLDCFCKNDEVELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWFFH 671

Query: 232  QMKDENINPDVVTYNSLIHGLCHANDWNEA---------------KRLFIE--------- 267
            Q+K ++++PD VT  +L+ GL       +A                R F E         
Sbjct: 672  QLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVE 730

Query: 268  -MMDQGVQ-PSVVTFNVIMDE----------LCKNRKMDEASRLLDLMVQR-GVRPNACT 314
              MD+ +     +  N I  E          LCK+++   A ++ D   ++ G+ P   +
Sbjct: 731  AEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790

Query: 315  YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
            YN L+     +    +A +LF  M+++GC  D  ++N+L+  + K+ ++ E   LY+EM+
Sbjct: 791  YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850

Query: 375  SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            S+  KP  +TYN +   L + + ++ AL  F ++         RTY   IDGL K G + 
Sbjct: 851  SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910

Query: 435  EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
            EA+ LF  +    C+ +   +N LI+G  K G  + A +LF  + +  + P++ +Y I++
Sbjct: 911  EAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILV 970

Query: 495  QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              LC  G++D+A   F +++     PD I ++ +I+G  +     +   L ++M+ + ++
Sbjct: 971  DCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIV 1030

Query: 555  PD 556
            PD
Sbjct: 1031 PD 1032



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 215/423 (50%), Gaps = 6/423 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+ ++ K L     + +   +  K++  G   N  +YN LI+ L ++G    AL ++  M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
            +         KP+  TYS ++  L K+   +    L  +M+D  + P+V T+   I  L
Sbjct: 219 VSEG------LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A   +EA  +F  M D+G  P +VT+ V++D LC   +++ A  L   M   G +P+ 
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             Y TL+D F   G ++  +E +  ME+ G   D V++ IL++  CK ++ +EA + +  
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI P + TYNTL  GL    ++E ALKL D M+  GV     TY TFID   K+G 
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             +AVE F  ++      +I A N  +  L + GRL+ A  +F  L    L P+ VTYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           M++     GQ+D+A +L  +M  N   PDVI  + LI    +     +  ++  +MK+ K
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 553 VMP 555
           + P
Sbjct: 573 LSP 575



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 254/541 (46%), Gaps = 45/541 (8%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
            +EA+ +FD M  M  SP  V ++N LL+ L K         A  LF         PN  +
Sbjct: 559  DEAWQMFDRMKDMKLSPT-VVTYNTLLSGLGKEGRVQ---KAIELFESMIXKKCSPNTIS 614

Query: 99   YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            +N L++CFCK   V L    F ++      P+  T+N++I GL  E+++  A   F +LK
Sbjct: 615  FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674

Query: 159  AFGCEPNVITYNTLINGLCRTGHTMIALNL----------------FEEMANGNGEIGVV 202
                 P+ +T  TL+ GL + G    A+++                +E++  G      +
Sbjct: 675  K-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEM 733

Query: 203  CKPNTVTYSTIIDGLCKE-GFVDKAKALFLQMKDE--------------NINPDVVTYNS 247
             K        +++G+C+E  F+     +  + K E               I+P + +YN 
Sbjct: 734  DKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793

Query: 248  LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            LI  L   +   +A  LF +M + G  P   TFN+++    K+ K+ E   L   M+ R 
Sbjct: 794  LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853

Query: 308  VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             +P+A TYN ++        +++A + F  + S   +    +Y  LI+G  K   +EEA+
Sbjct: 854  CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 368  SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
             L+ EM   G KP    +N L  G  +I   E A +LF  M  +G+  D ++YT  +D L
Sbjct: 914  RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973

Query: 428  CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            C  G + EA+  F  L+    + D  AYN +I+GL KS R++ A  L+  + +  +VP++
Sbjct: 974  CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033

Query: 488  VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             TYN ++  L   G +++A+ ++ +++     PDV T++ LI G+     P     +   
Sbjct: 1034 YTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKN 1093

Query: 548  M 548
            M
Sbjct: 1094 M 1094



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 249/531 (46%), Gaps = 18/531 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYN 100
           +EAF  FD M R     P + ++N L+  L +        K  DT + + G+ P  YTY 
Sbjct: 384 DEAFATFDVM-RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDT-MESVGVQPTAYTYI 441

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
             I+ F K G        F ++      PN    N+ +  L    R+ EA  +F  L+  
Sbjct: 442 TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN 501

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+ +TYN ++    + G    A+NL  EM   NG     C+P+ +  +++ID L K 
Sbjct: 502 GLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR-NG-----CEPDVIVVNSLIDSLYKA 555

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G VD+A  +F +MKD  ++P VVTYN+L+ GL       +A  LF  M+ +   P+ ++F
Sbjct: 556 GRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISF 615

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N ++D  CKN +++ A ++   M     +P+  TYNT++ G     K+N A   F  ++ 
Sbjct: 616 NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK 675

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVVTYNTLFLGLFEIHQVE 399
                D V+   L+ G  K  ++ +A+S+ R+ M     +     +  L  G     +++
Sbjct: 676 -SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCL 458
            A+   +E+  +G+  +       +  LCK+   + A ++F +  + L     + +YNCL
Sbjct: 735 KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I  L +    + AW+LF  + +    P+  T+N+++      G++ +  +L+ +M     
Sbjct: 795 IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            PD IT++++I    + N   K  +  + +      P       ++D L K
Sbjct: 855 KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAK 905



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 178/355 (50%), Gaps = 7/355 (1%)

Query: 102  LINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            L+   CK  R    +  F +  +    +P  A++N LI  L       +A  LF  +K  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            GC P+  T+N L+    ++G       L++EM      I   CKP+ +TY+ +I  L K 
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEM------ISRRCKPDAITYNIVISSLAKS 871

Query: 221  GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              +DKA   F  +   +  P   TY  LI GL       EA RLF EM D G +P+   F
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 281  NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            N++++   K    + A +L   MV  G+RP+  +Y  L+D  CL G+++ A   F  ++S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 341  MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
             G   D ++YN +ING  K++ +EEAL+LY EM ++GI P + TYN+L L L     VE 
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 401  ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            A ++++E+Q  G+  D  TY   I G   +     A  +++ + +  C  +I  Y
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 182/355 (51%), Gaps = 7/355 (1%)

Query: 137  LIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
            L++ L    R + A  +F K  K  G  P + +YN LI  L    +T  A +LF++M N 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN- 816

Query: 196  NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                 V C P+  T++ ++    K G + +   L+ +M      PD +TYN +I  L  +
Sbjct: 817  -----VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKS 871

Query: 256  NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
            N+ ++A   F +++    +P+  T+  ++D L K  +++EA RL + M   G +PN   +
Sbjct: 872  NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIF 931

Query: 316  NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
            N L++G+  +G    A +LF  M + G + D  SY IL++  C    V+EAL  + E+ S
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 376  KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
             G+ P  + YN +  GL +  ++E AL L++EM+  G+  D  TY + +  L   G + +
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 436  AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            A  ++  L++   E D+  YN LI G   S   + A+ ++ ++      PN+ TY
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 148/303 (48%), Gaps = 24/303 (7%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLNATGLF------------PNLYTYNILINCFCKIGRV 112
            P   +FN+LLA   K+         T LF            P+  TYNI+I+   K   +
Sbjct: 821  PDAFTFNMLLAVHGKSG------KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 113  SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                  F  ++ S F P   T+  LI GL    R+ EA  LF ++  +GC+PN   +N L
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 173  INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
            ING  + G T  A  LF+ M N         +P+  +Y+ ++D LC  G VD+A   F +
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEG------IRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 233  MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            +K   ++PD + YN +I+GL  +    EA  L+ EM ++G+ P + T+N +M  L     
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 293  MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            +++A R+ + +   G+ P+  TYN L+ G+ L      A  ++ +M   GC  +  +Y  
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQ 1108

Query: 353  LIN 355
            L N
Sbjct: 1109 LPN 1111



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 142/278 (51%)

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N +++ L  + K+++ + + + M ++ +R +  TY T+     + G + +   +   M
Sbjct: 124 TCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKM 183

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   +  SYN LI+   ++    EAL +YR MVS+G+KP++ TY+ L + L +    
Sbjct: 184 RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDS 243

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E  + L  EM+  G+  +  T+T  I  L + G I EA E+FR +    C  D+  Y  L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           ID LC +G+L+ A ELF  +      P+ V Y  ++    + G +D  ++ +  ME +  
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            PDV+TF +L+    +  +  +       M+++ ++P+
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 146/326 (44%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F  M  + ++  + T+  I   L     + + + +L+ M + G   NA +YN L+    
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G    A E++  M S G K    +Y+ L+    K ++ E  + L +EM   G++P V 
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+      L    +++ A ++F  M  +G   D  TYT  ID LC  G +  A ELF  +
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +    + D   Y  L+D     G L    E +  +     +P+VVT+ I++  LC     
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A   F  M +    P++ T++ LI G +R        +LL  M+   V P A      
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443

Query: 564 VDLLVKNEISLKSLPSFLVQERQGEV 589
           +D   K+  + K++ +F   + +G V
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIV 469



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 98/204 (48%)

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +VE+  +++  M  K I+  + TY T+F  L     +     + ++M++ G   +  +Y 
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             I  L ++G+  EA+E++R +     +  ++ Y+ L+  L K    +    L   +   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            L PNV T+ I I+ L   G++D+A ++F  M++    PD++T+ +LI       +    
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
            EL  KMK     PD  I   ++D
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLD 340



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 4/192 (2%)

Query: 380 PTVV-TYNT--LFLGLFEIH-QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           PTV+ T  T    L    +H +VE    +F+ MQ+  +  D  TY T    L   G + +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
              +   +R     L+  +YN LI  L +SG    A E++  +    L P++ TY+ ++ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            L      +    L  +ME+    P+V TF + I    R  +  +  E+  +M ++   P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 556 DASIVSIVVDLL 567
           D    ++++D L
Sbjct: 296 DLVTYTVLIDAL 307


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 257/516 (49%), Gaps = 21/516 (4%)

Query: 67   VSSFNILLASLAKNKHYDTRLNATGL-----FP------NLYTYNILINCFCKIGRVSLG 115
            V S N+ LA L+K    D    AT +     FP      N+ +YNI+I+  C++GR++  
Sbjct: 633  VDSCNVYLARLSK----DCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEA 688

Query: 116  FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                  +    +TP+  +++++I G      + +   L  K+K  G +PN  TY ++I  
Sbjct: 689  HHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGL 748

Query: 176  LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            LCR      A   F EM      IG    P+T+ Y+T++DG CK G +  A   F +M  
Sbjct: 749  LCRICKLAEAEEAFSEM------IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHS 802

Query: 236  ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             +I PDV+TY ++I G C   D  EA +LF EM+ +G++P ++TF  +M+  CK   + +
Sbjct: 803  RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKD 862

Query: 296  ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            A R+ + M+Q G  PN  TY TL+DG C  G ++ A EL   M  +G + +  +YN ++N
Sbjct: 863  AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 922

Query: 356  GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            G CK+  +EEA+ L  E  + G+    VTY TL     +  +++ A ++  EM   G+  
Sbjct: 923  GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982

Query: 416  DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
               T+   ++G C +G + +  +L   +       +   +NCL+   C    LK A  ++
Sbjct: 983  TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIY 1042

Query: 476  CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
              +    + P+  TY  +++G CN   M +A  LF +M+    +  V T+ +LI GF + 
Sbjct: 1043 KDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKR 1102

Query: 536  NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +  +  E+  +M+   +  D  I     D   K +
Sbjct: 1103 KKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 228/465 (49%), Gaps = 6/465 (1%)

Query: 130  NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
            N A++N +I  +    RI EA  L   ++  G  P+VI+Y+T+ING CR G       L 
Sbjct: 668  NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727

Query: 190  EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
            E+M           KPN+ TY +II  LC+   + +A+  F +M  + I PD + Y +L+
Sbjct: 728  EKMKQKG------LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLV 781

Query: 250  HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
             G C   D   A + F EM  + + P V+T+  I+   C+   M EA +L   M+ RG+ 
Sbjct: 782  DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLE 841

Query: 310  PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            P+  T+  LM+G+C  G I  A  +   M   GC  + V+Y  LI+G CK  +++ A  L
Sbjct: 842  PDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 901

Query: 370  YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
              EM   G++P + TYN++  GL +   +E A+KL  E +  G+ ADT TYTT +D  CK
Sbjct: 902  LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 961

Query: 430  NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            +G + +A E+   +     +  I  +N L++G C  G L+   +L   +    + PN  T
Sbjct: 962  SGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1021

Query: 490  YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
            +N +++  C    +  A  ++ DM      PD  T++ L+ G        +   L  +MK
Sbjct: 1022 FNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMK 1081

Query: 550  EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
             K      S  S+++    K +  +++   F    R G   +  +
Sbjct: 1082 GKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 217/441 (49%), Gaps = 12/441 (2%)

Query: 150  AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
            A  +F +    G   NV +YN +I+ +C+ G    A +L   M            P+ ++
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKG------YTPDVIS 706

Query: 210  YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            YST+I+G C+ G +DK   L  +MK + + P+  TY S+I  LC      EA+  F EM+
Sbjct: 707  YSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI 766

Query: 270  DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             QG+ P  + +  ++D  CK   +  AS+    M  R + P+  TY  ++ GFC +G + 
Sbjct: 767  GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 826

Query: 330  RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
             A +LF  M   G + D +++  L+NGYCK   +++A  ++  M+  G  P VVTY TL 
Sbjct: 827  EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLI 886

Query: 390  LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             GL +   ++ A +L  EM + G+  +  TY + ++GLCK+G I EAV+L          
Sbjct: 887  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946

Query: 450  LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             D   Y  L+D  CKSG +  A E+   +    L P +VT+N+++ G C  G ++    L
Sbjct: 947  ADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1006

Query: 510  FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               M     AP+  TF+ L+  +   N       +   M  + V PD        + LVK
Sbjct: 1007 LNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK----TYENLVK 1062

Query: 570  NEISLKSLPS--FLVQERQGE 588
               + +++    FL QE +G+
Sbjct: 1063 GHCNARNMKEAWFLFQEMKGK 1083



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 29/313 (9%)

Query: 91   GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
            GL P++ T+  L+N +CK G +   F     ++++  +PN  T+ +LI GL  E  +  A
Sbjct: 839  GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898

Query: 151  AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG-------------- 195
              L  ++   G +PN+ TYN+++NGLC++G+   A+ L  E  A G              
Sbjct: 899  NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 958

Query: 196  ---NGE-----------IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
               +GE           +G   +P  VT++ +++G C  G ++  + L   M  + I P+
Sbjct: 959  YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1018

Query: 242  VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              T+N L+   C  N+   A  ++ +M  +GV+P   T+  ++   C  R M EA  L  
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQ 1078

Query: 302  LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
             M  +G   +  TY+ L+ GF    K   A E+F  M   G   D   ++   +   K K
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138

Query: 362  EVEEALSLYREMV 374
              +  +    E++
Sbjct: 1139 RPDTIVDPIDEII 1151



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 36/293 (12%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
             +AF + ++M++   SP  V ++  L+  L K    D+       +   GL PN++TYN 
Sbjct: 861  KDAFRVHNHMIQAGCSPN-VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            ++N  CK G +       G    +    +  T+ +L+        + +A  + T++   G
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 162  CEPNVITYNTLINGLCRTG---------HTMIALNLFEEMANGNGEIGVVC--------- 203
             +P ++T+N L+NG C  G         + M+A  +       N  +   C         
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 204  -----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       +P+  TY  ++ G C    + +A  LF +MK +  +  V TY+ LI G 
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 253  CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
                 + EA+ +F +M   G+      F+   D   K ++ D     +D +++
Sbjct: 1100 FKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 257/540 (47%), Gaps = 46/540 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P  ++ NILL SL +   +     A      G+ P++Y +   IN FCK G+V      F
Sbjct: 213 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF 272

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            ++  +   PN  TFN++I GL    R  EA     K+   G EP +ITY+ L+ GL R 
Sbjct: 273 SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA 332

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A  + +EM            PN + Y+ +ID   + G ++KA  +   M  + ++
Sbjct: 333 KRIGDAYFVLKEMTKKG------FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 386

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
               TYN+LI G C     + A+RL  EM+  G   +  +F  ++  LC +   D A R 
Sbjct: 387 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 446

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF------------------------ 335
           +  M+ R + P      TL+ G C  GK ++A EL+                        
Sbjct: 447 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 506

Query: 336 -GSMESM----------GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G ++            GC  D VSYN LI+G C  K+++EA     EMV +G+KP   T
Sbjct: 507 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 566

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  GLF +++VE A++ +D+ +R+G+  D  TY+  IDG CK     E  E F  + 
Sbjct: 567 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 626

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + +   YN LI   C+SGRL  A EL   + H  + PN  TY  +I+G+    +++
Sbjct: 627 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 686

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A+ LF +M      P+V  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 687 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 746



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 239/505 (47%), Gaps = 35/505 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN ++  L     YD       ++   G+ P L TY+IL+    +  R+   +  
Sbjct: 282 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 341

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +  F PN   +N+LI        + +A  +   + + G      TYNTLI G C+
Sbjct: 342 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 401

Query: 179 TGHTMIALNLFEEM------ANGNGEIGVVC-----------------------KPNTVT 209
            G    A  L +EM       N      V+C                        P    
Sbjct: 402 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 461

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            +T+I GLCK G   KA  L+ Q  ++    D  T N+L+HGLC A   +EA R+  E++
Sbjct: 462 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 521

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G     V++N ++   C  +K+DEA   LD MV+RG++P+  TY+ L+ G   M K+ 
Sbjct: 522 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 581

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A + +   +  G   D  +Y+++I+G CK +  EE    + EM+SK ++P  V YN L 
Sbjct: 582 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 641

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                  ++  AL+L ++M+  G++ ++ TYT+ I G+     + EA  LF  +R+   E
Sbjct: 642 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 701

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y  LIDG  K G++     L   +    + PN +TY +MI G   DG + +A  L
Sbjct: 702 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 761

Query: 510 FLDMEENAAAPDVITFDMLIHGFIR 534
             +M E    PD IT+   I+G+++
Sbjct: 762 LNEMREKGIVPDSITYKEFIYGYLK 786



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 214/425 (50%), Gaps = 13/425 (3%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PN 206
           A  +F  L   G  P+  T N L+  L R          F+          VVCK   P+
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD----------VVCKGVSPD 248

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
              ++T I+  CK G V++A  LF +M++  + P+VVT+N++I GL     ++EA     
Sbjct: 249 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 308

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+++G++P+++T+++++  L + +++ +A  +L  M ++G  PN   YN L+D F   G
Sbjct: 309 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 368

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +N+A E+   M S G      +YN LI GYCKN + + A  L +EM+S G      ++ 
Sbjct: 369 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 428

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           ++   L      + AL+   EM    ++      TT I GLCK+G   +A+EL+      
Sbjct: 429 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 488

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              +D +  N L+ GLC++G+L  A+ +   +     V + V+YN +I G C   ++D+A
Sbjct: 489 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 548

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
                +M +    PD  T+ +LI G   +N+  +  +     K   ++PD    S+++D 
Sbjct: 549 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 608

Query: 567 LVKNE 571
             K E
Sbjct: 609 CCKAE 613



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 180/374 (48%), Gaps = 12/374 (3%)

Query: 69  SFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           SF  ++  L  +  +D+ L   G      + P       LI+  CK G+ S     + + 
Sbjct: 426 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 485

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L   F  +  T N+L+ GL    ++ EA  +  ++   GC  + ++YNTLI+G C     
Sbjct: 486 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 545

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A    +EM           KP+  TYS +I GL     V++A   +   K   + PDV
Sbjct: 546 DEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 599

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ +I G C A    E +  F EMM + VQP+ V +N ++   C++ ++  A  L + 
Sbjct: 600 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 659

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M  +G+ PN+ TY +L+ G  ++ ++  A+ LF  M   G + +   Y  LI+GY K  +
Sbjct: 660 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 719

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + +   L REM SK + P  +TY  +  G      V  A +L +EM+  G+  D+ TY  
Sbjct: 720 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 779

Query: 423 FIDGLCKNGYIIEA 436
           FI G  K G ++EA
Sbjct: 780 FIYGYLKQGGVLEA 793



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 171/389 (43%), Gaps = 28/389 (7%)

Query: 53  IFDYMLR------MHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYN 100
           +FD  LR      +    P       L++ L K+  +   L         G   +  T N
Sbjct: 439 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            L++  C+ G++   F     IL      +  ++N+LI G   + ++ EA     ++   
Sbjct: 499 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G +P+  TY+ LI GL        A+  +++    NG +     P+  TYS +IDG CK 
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTYSVMIDGCCKA 612

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              ++ +  F +M  +N+ P+ V YN LI   C +   + A  L  +M  +G+ P+  T+
Sbjct: 613 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 672

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++  +    +++EA  L + M   G+ PN   Y  L+DG+  +G++ + E L   M S
Sbjct: 673 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 732

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
                + ++Y ++I GY ++  V EA  L  EM  KGI P  +TY     G  +   V  
Sbjct: 733 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 792

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           A K           +D   Y   I+G  K
Sbjct: 793 AFK----------GSDEENYAAIIEGWNK 811


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 257/540 (47%), Gaps = 46/540 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P  ++ NILL SL +   +     A      G+ P++Y +   IN FCK G+V      F
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF 283

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            ++  +   PN  TFN++I GL    R  EA     K+   G EP +ITY+ L+ GL R 
Sbjct: 284 SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA 343

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A  + +EM            PN + Y+ +ID   + G ++KA  +   M  + ++
Sbjct: 344 KRIGDAYFVLKEMTKKG------FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
               TYN+LI G C     + A+RL  EM+  G   +  +F  ++  LC +   D A R 
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF------------------------ 335
           +  M+ R + P      TL+ G C  GK ++A EL+                        
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517

Query: 336 -GSMESM----------GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G ++            GC  D VSYN LI+G C  K+++EA     EMV +G+KP   T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  GLF +++VE A++ +D+ +R+G+  D  TY+  IDG CK     E  E F  + 
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + +   YN LI   C+SGRL  A EL   + H  + PN  TY  +I+G+    +++
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A+ LF +M      P+V  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 239/505 (47%), Gaps = 35/505 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN ++  L     YD       ++   G+ P L TY+IL+    +  R+   +  
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +  F PN   +N+LI        + +A  +   + + G      TYNTLI G C+
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412

Query: 179 TGHTMIALNLFEEM------ANGNGEIGVVC-----------------------KPNTVT 209
            G    A  L +EM       N      V+C                        P    
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            +T+I GLCK G   KA  L+ Q  ++    D  T N+L+HGLC A   +EA R+  E++
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G     V++N ++   C  +K+DEA   LD MV+RG++P+  TY+ L+ G   M K+ 
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A + +   +  G   D  +Y+++I+G CK +  EE    + EM+SK ++P  V YN L 
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                  ++  AL+L ++M+  G++ ++ TYT+ I G+     + EA  LF  +R+   E
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y  LIDG  K G++     L   +    + PN +TY +MI G   DG + +A  L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772

Query: 510 FLDMEENAAAPDVITFDMLIHGFIR 534
             +M E    PD IT+   I+G+++
Sbjct: 773 LNEMREKGIVPDSITYKEFIYGYLK 797



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 214/425 (50%), Gaps = 13/425 (3%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PN 206
           A  +F  L   G  P+  T N L+  L R          F+          VVCK   P+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD----------VVCKGVSPD 259

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
              ++T I+  CK G V++A  LF +M++  + P+VVT+N++I GL     ++EA     
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+++G++P+++T+++++  L + +++ +A  +L  M ++G  PN   YN L+D F   G
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +N+A E+   M S G      +YN LI GYCKN + + A  L +EM+S G      ++ 
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           ++   L      + AL+   EM    ++      TT I GLCK+G   +A+EL+      
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              +D +  N L+ GLC++G+L  A+ +   +     V + V+YN +I G C   ++D+A
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
                +M +    PD  T+ +LI G   +N+  +  +     K   ++PD    S+++D 
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619

Query: 567 LVKNE 571
             K E
Sbjct: 620 CCKAE 624



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 180/374 (48%), Gaps = 12/374 (3%)

Query: 69  SFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           SF  ++  L  +  +D+ L   G      + P       LI+  CK G+ S     + + 
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L   F  +  T N+L+ GL    ++ EA  +  ++   GC  + ++YNTLI+G C     
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A    +EM           KP+  TYS +I GL     V++A   +   K   + PDV
Sbjct: 557 DEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ +I G C A    E +  F EMM + VQP+ V +N ++   C++ ++  A  L + 
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M  +G+ PN+ TY +L+ G  ++ ++  A+ LF  M   G + +   Y  LI+GY K  +
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + +   L REM SK + P  +TY  +  G      V  A +L +EM+  G+  D+ TY  
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790

Query: 423 FIDGLCKNGYIIEA 436
           FI G  K G ++EA
Sbjct: 791 FIYGYLKQGGVLEA 804



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 16/339 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   +  T N L++  C+ G++   F     IL      +  ++N+LI G   + ++ EA
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                ++   G +P+  TY+ LI GL        A+  +++    NG +     P+  TY
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTY 613

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S +IDG CK    ++ +  F +M  +N+ P+ V YN LI   C +   + A  L  +M  
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P+  T+  ++  +    +++EA  L + M   G+ PN   Y  L+DG+  +G++ +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
            E L   M S     + ++Y ++I GY ++  V EA  L  EM  KGI P  +TY     
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           G  +   V  A K           +D   Y   I+G  K
Sbjct: 794 GYLKQGGVLEAFK----------GSDEENYAAIIEGWNK 822


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 257/540 (47%), Gaps = 46/540 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P  ++ NILL SL +   +     A      G+ P++Y +   IN FCK G+V      F
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF 296

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            ++  +   PN  TFN++I GL    R  EA     K+   G EP +ITY+ L+ GL R 
Sbjct: 297 SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA 356

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A  + +EM            PN + Y+ +ID   + G ++KA  +   M  + ++
Sbjct: 357 KRIGDAYFVLKEMTKKG------FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
               TYN+LI G C     + A+RL  EM+  G   +  +F  ++  LC +   D A R 
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF------------------------ 335
           +  M+ R + P      TL+ G C  GK ++A EL+                        
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530

Query: 336 -GSMESM----------GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G ++            GC  D VSYN LI+G C  K+++EA     EMV +G+KP   T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  GLF +++VE A++ +D+ +R+G+  D  TY+  IDG CK     E  E F  + 
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + +   YN LI   C+SGRL  A EL   + H  + PN  TY  +I+G+    +++
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A+ LF +M      P+V  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 239/505 (47%), Gaps = 35/505 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN ++  L     YD       ++   G+ P L TY+IL+    +  R+   +  
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 365

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +  F PN   +N+LI        + +A  +   + + G      TYNTLI G C+
Sbjct: 366 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 425

Query: 179 TGHTMIALNLFEEM------ANGNGEIGVVC-----------------------KPNTVT 209
            G    A  L +EM       N      V+C                        P    
Sbjct: 426 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 485

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            +T+I GLCK G   KA  L+ Q  ++    D  T N+L+HGLC A   +EA R+  E++
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G     V++N ++   C  +K+DEA   LD MV+RG++P+  TY+ L+ G   M K+ 
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A + +   +  G   D  +Y+++I+G CK +  EE    + EM+SK ++P  V YN L 
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                  ++  AL+L ++M+  G++ ++ TYT+ I G+     + EA  LF  +R+   E
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 725

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y  LIDG  K G++     L   +    + PN +TY +MI G   DG + +A  L
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 785

Query: 510 FLDMEENAAAPDVITFDMLIHGFIR 534
             +M E    PD IT+   I+G+++
Sbjct: 786 LNEMREKGIVPDSITYKEFIYGYLK 810



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 214/425 (50%), Gaps = 13/425 (3%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PN 206
           A  +F  L   G  P+  T N L+  L R          F+          VVCK   P+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD----------VVCKGVSPD 272

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
              ++T I+  CK G V++A  LF +M++  + P+VVT+N++I GL     ++EA     
Sbjct: 273 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 332

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+++G++P+++T+++++  L + +++ +A  +L  M ++G  PN   YN L+D F   G
Sbjct: 333 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 392

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +N+A E+   M S G      +YN LI GYCKN + + A  L +EM+S G      ++ 
Sbjct: 393 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 452

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           ++   L      + AL+   EM    ++      TT I GLCK+G   +A+EL+      
Sbjct: 453 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 512

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              +D +  N L+ GLC++G+L  A+ +   +     V + V+YN +I G C   ++D+A
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
                +M +    PD  T+ +LI G   +N+  +  +     K   ++PD    S+++D 
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632

Query: 567 LVKNE 571
             K E
Sbjct: 633 CCKAE 637



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 180/374 (48%), Gaps = 12/374 (3%)

Query: 69  SFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           SF  ++  L  +  +D+ L   G      + P       LI+  CK G+ S     + + 
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L   F  +  T N+L+ GL    ++ EA  +  ++   GC  + ++YNTLI+G C     
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A    +EM           KP+  TYS +I GL     V++A   +   K   + PDV
Sbjct: 570 DEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ +I G C A    E +  F EMM + VQP+ V +N ++   C++ ++  A  L + 
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 683

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M  +G+ PN+ TY +L+ G  ++ ++  A+ LF  M   G + +   Y  LI+GY K  +
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + +   L REM SK + P  +TY  +  G      V  A +L +EM+  G+  D+ TY  
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803

Query: 423 FIDGLCKNGYIIEA 436
           FI G  K G ++EA
Sbjct: 804 FIYGYLKQGGVLEA 817



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 16/339 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   +  T N L++  C+ G++   F     IL      +  ++N+LI G   + ++ EA
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                ++   G +P+  TY+ LI GL        A+  +++    NG +     P+  TY
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTY 626

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S +IDG CK    ++ +  F +M  +N+ P+ V YN LI   C +   + A  L  +M  
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P+  T+  ++  +    +++EA  L + M   G+ PN   Y  L+DG+  +G++ +
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
            E L   M S     + ++Y ++I GY ++  V EA  L  EM  KGI P  +TY     
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 806

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           G  +   V  A K           +D   Y   I+G  K
Sbjct: 807 GYLKQGGVLEAFK----------GSDEENYAAIIEGWNK 835


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 255/527 (48%), Gaps = 16/527 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK-HYDT-----RLNATGLFPNLYTYNIL 102
            A  + D M R     P   S+N +L++LA+   H D      R+    + P  +T+ + 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
               C++GR          + R    P+A  + ++I  L A+  + EAA L  ++   GC
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             +V T+N ++ GLC  GH   A  L + M          C P+ VTY  ++ GLC+   
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHG------CTPSVVTYGFLLRGLCRTRQ 300

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            D+A A+  ++ + N    VV  N++I G         A  L+  M  +G  P V T+N+
Sbjct: 301 ADEAYAMLGRVPEVN----VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNI 356

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M  LCK  +   A R+LD M ++G  PN  TY+TL+  FC  G  + A  +   M + G
Sbjct: 357 LMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG 416

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              +   YN +I    K+ +++EA+ L +EM S+G KP + TYNT+   L    Q++ A 
Sbjct: 417 FSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAE 476

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +F  +  +GV A+  TY T I  L  +G   E + L   + +  C LD+ +YN LI  L
Sbjct: 477 HIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL 536

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G +  +  L   +    + PN  +YN++I  LC  G++  A +L  +M      PD+
Sbjct: 537 CKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDI 596

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +T++ LI+G  ++        LL K+  + V PD    +I++    K
Sbjct: 597 VTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCK 643



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 146/334 (43%), Gaps = 4/334 (1%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P   +YN+++  L  A+   +A  L+  M+   V P+  TF V    LC+  +  +A 
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDAL 200

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL  M + G  P+A  Y T++      G +  A  L   M  MGC  D  ++N ++ G 
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGL 260

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    V EA  L   M+  G  P+VVTY  L  GL    Q + A  +   +    V    
Sbjct: 261 CGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV--- 317

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
               T I G    G +  A EL+  +    C  D+  YN L+ GLCK GR   A  +   
Sbjct: 318 -MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE 376

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      PN+VTY+ ++   C +G  D AR +   M     + +   ++ +I+   +  +
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +   L+ +MK +   PD    + ++  L  N+
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNND 470



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 134/261 (51%), Gaps = 12/261 (4%)

Query: 68  SSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
             +N ++ +L K+   D        + + G  P++ TYN +I   C   ++      FG 
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGN 481

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +L      N  T+N+LI  L    R  E   L  ++   GC  +V++YN LI  LC+ G+
Sbjct: 482 LLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGN 541

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              ++ L EEM           KPN  +Y+ +I+ LCK G V  A  L  +M ++ + PD
Sbjct: 542 VDRSMMLLEEMMTKG------IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD 595

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           +VTYN+LI+GLC     + A  L  ++ ++ V P +VT+N+++   CK R +D+AS LLD
Sbjct: 596 IVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLD 655

Query: 302 LMVQRGVRPNACTYNTLMDGF 322
             V  G+ PN  T+  ++  F
Sbjct: 656 KAVSGGIVPNERTWGMMVQNF 676


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 138/412 (33%), Positives = 218/412 (52%), Gaps = 11/412 (2%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           GC+P+V+TY  L+  +C++     A+N+ +EM A G       C PN VTY+ II+G+C+
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-------CTPNIVTYNVIINGMCR 234

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG VD AK +  ++      PD+V+Y +++ GLC A  W++ K LF EM+D+   P+ VT
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F++++   C+   ++ A ++L  M Q G  PN    N +++  C  G+++ A +   +M 
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC  D +SY  ++ G C+    E A  L  EMV K   P  VT+NT    L +   +E
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+KL + M   G +    TY   + G C  G +  A+ELF  L    CE +   Y  L+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLL 471

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            GLC + RL  A EL   +       N VT+N+++   C  G +++A +L   M E+   
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           P++ITF+ L+ G  +     +  ELLH +  K V  D    S VVD+L + +
Sbjct: 532 PNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED 583



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 249/496 (50%), Gaps = 15/496 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ +LL ++ K+  +   +N      A G  PN+ TYN++IN  C+ GRV      
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+    F P+  ++ +++KGL A  R  +   LF ++    C PN +T++ L+   CR
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ + ++M+         C PNT   + +I+ +CK+G VD A      M     
Sbjct: 305 GGMVERAIQVLQQMSQHG------CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NPD ++Y +++ GLC A  W  AK L  EM+ +   P+ VTFN  +  LC+   +++A +
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L++LM + G      TYN L+ GFC+ G+++ A ELF ++    C+ + ++Y  L+ G C
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLC 475

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
             + ++ A  L  EM+ K      VT+N L     +   VE A++L ++M   G   +  
Sbjct: 476 HAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 535

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+ T +DG+ K+    EA+EL   L      LD   Y+ ++D L +  R + A ++  ++
Sbjct: 536 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 595

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P V  YN ++  LC   + D+A D F  M  N   P+  T+ +LI G       
Sbjct: 596 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 655

Query: 539 SKVNELLHKMKEKKVM 554
            +   +L ++  K V+
Sbjct: 656 KEARYVLSELYAKGVL 671



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 142/265 (53%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ +G QPSVVT+ V+++ +CK+    EA  +LD M  +G  PN  TYN +++G C  G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A+E+   + S G + D VSY  ++ G C  +  ++   L+ EMV K   P  VT++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L         VE A+++  +M + G   +T      I+ +CK G + +A +    + +  
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C  D  +Y  ++ GLC++GR + A EL   +      PN VT+N  I  LC  G +++A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 508 DLFLDMEENAAAPDVITFDMLIHGF 532
            L   M E   +  ++T++ L+HGF
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGF 442



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 173/362 (47%), Gaps = 15/362 (4%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTR---LNATGLF---PNLYTYNILINCFCKIGR 111
           +  H   P  +  NI++ ++ K    D     LN  G++   P+  +Y  ++   C+ GR
Sbjct: 318 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 377

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
                     ++R    PN  TFN+ I  L  +  I +A  L   +  +GC   ++TYN 
Sbjct: 378 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 437

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L++G C  G    AL LF  +          C+PNT+TY+T++ GLC    +D A  L  
Sbjct: 438 LVHGFCVQGRVDSALELFNNLP---------CEPNTITYTTLLTGLCHAERLDAAAELLA 488

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M  ++   + VT+N L+   C      EA  L  +MM+ G  P+++TFN ++D + K+ 
Sbjct: 489 EMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 548

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
             +EA  LL  +V +GV  +  TY++++D      +   A ++  +++ MG +     YN
Sbjct: 549 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 608

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            ++   CK  E ++A+  +  MVS G  P   TY  L  GL     ++ A  +  E+   
Sbjct: 609 KILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 668

Query: 412 GV 413
           GV
Sbjct: 669 GV 670



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 167/337 (49%), Gaps = 3/337 (0%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M      P VVTY  L+  +C ++ + EA  +  EM  +G  P++VT+NVI++ +C+  +
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D+A  +L+ +   G +P+  +Y T++ G C   + +  + LF  M    C  ++V++++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L+  +C+   VE A+ + ++M   G  P     N +   + +  +V+ A    + M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              DT +YTT + GLC+ G    A EL   +    C  +   +N  I  LC+ G ++ A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +L   +P       +VTYN ++ G C  G++D A +LF ++      P+ IT+  L+ G 
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGL 474

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                     ELL +M +K    +A   +++V    +
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQ 511


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 235/477 (49%), Gaps = 9/477 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++   N ++       R          +L+    P+  T+N+L+     E R  + 
Sbjct: 197 GVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKV 256

Query: 151 AALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           A L  ++  +  GC PN +T+N +I GL R G    A  + E M        +  K ++ 
Sbjct: 257 AMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-------LSKKASSF 309

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +I GL  +GFV KA  L L+M++E I P VVTYN++IHGL  +     A+  F+EM
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G+QP V+T+N +++  CK   + EA  L   +   G+ P   TYN L+DG+C +G +
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDL 429

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L   M   GC  D  +Y IL+ G      +  A   + EM+SKG++P    YNT 
Sbjct: 430 EEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTR 489

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                 +  +  A +L + M  +G+++DT TY   IDGLCK G + +A +L   +     
Sbjct: 490 IRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGL 549

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D   Y CLI   C+ G L+ A + F  +    L P+ VTY + I   C  G +  A  
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYG 609

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            F  M E    P+ IT+++LIH   R           H+M E+ ++P+    ++++D
Sbjct: 610 WFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 164/516 (31%), Positives = 244/516 (47%), Gaps = 52/516 (10%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR--- 111
           H   P V   N +L  L+    +D        +   G+ P++ TYN L++ F K GR   
Sbjct: 196 HGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDK 255

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V++           C  PN  T N +I GL  +  + EAA +   ++    + +  TYN 
Sbjct: 256 VAMLLKEMETRGSGCL-PNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASSFTYNP 313

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI GL   G    A +L  EM N     G++  P  VTY+ +I GL + G V+ A+  F+
Sbjct: 314 LITGLLAKGFVKKADDLQLEMENE----GIM--PTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M+   + PDV+TYNSL++G C A    EA  LF ++   G+ P+V+T+N+++D  C+  
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK------- 344
            ++EA RL + MV++G  P+ CTY  LM G      +  A E F  M S G +       
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 345 ----------------------------HDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
                                        D V+YNILI+G CK   + +A  L  +MV  
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN 547

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G++P  +TY  L     E   +  A K F +M  DG+A    TYT FI   C+ G +  A
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSA 607

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
              FR +     E +   YN LI  LC++GR + A+  F  +    LVPN  TY ++I G
Sbjct: 608 YGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            C +G  + A   + +M +N   PD +T   L  GF
Sbjct: 668 NCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 227/459 (49%), Gaps = 7/459 (1%)

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
           +L   AF  +      P+    N +++ L   +R  +  A+  ++   G EP+++TYNTL
Sbjct: 184 TLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTL 243

Query: 173 INGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++   + G       L +EM   G+G     C PN VT++ +I GL ++G +++A  +  
Sbjct: 244 LDSFLKEGRNDKVAMLLKEMETRGSG-----CLPNDVTHNVVITGLARKGDLEEAAEMVE 298

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M+         TYN LI GL       +A  L +EM ++G+ P+VVT+N ++  L ++ 
Sbjct: 299 GMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSG 357

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +++ A      M   G++P+  TYN+L++G+C  G +  A  LFG +   G     ++YN
Sbjct: 358 QVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYN 417

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           ILI+GYC+  ++EEA  L  EMV +G  P V TY  L  G      +  A + FDEM   
Sbjct: 418 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK 477

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+  D   Y T I      G I +A  L   + +     D   YN LIDGLCK+G L  A
Sbjct: 478 GLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDA 537

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +L   + H  L P+ +TY  +I   C  G + +AR  F DM  +  AP  +T+ + IH 
Sbjct: 538 KDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHA 597

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + R            KM E+ V P+    ++++  L + 
Sbjct: 598 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRT 636



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 175/377 (46%), Gaps = 36/377 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++  L ++   +        + A GL P++ TYN L+N +CK G +    + 
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG +  +   P   T+N LI G      + EA  L  ++   GC P+V TY  L+ G   
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460

Query: 179 TGHTMIALNLFEEMANGNGE---------------IGVVCKP--------------NTVT 209
                +A   F+EM +   +               +G + K               +TVT
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +IDGLCK G ++ AK L ++M    + PD +TY  LIH  C      EA++ F +M+
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+ PS VT+ V +   C+   +  A      M++ GV PN  TYN L+   C  G+  
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQ 640

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A   F  M   G   +  +Y +LI+G CK    E+A+  Y EM   GI P  +T+  LF
Sbjct: 641 LAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700

Query: 390 LGLFEIHQVEHALKLFD 406
            G  E H + HA++  +
Sbjct: 701 KGFDEGH-MNHAIEYLE 716


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 236/444 (53%), Gaps = 7/444 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI+     G  +     + R++     P+  T+++L+  L    
Sbjct: 191 KMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRG 249

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
              +   L  ++K+ G  PN+ TY   I  L R      A  +F+EM +        C P
Sbjct: 250 DTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG------CGP 303

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + +TY+ +ID LC  G +DKAK L+++M+  + +PD VTY +L+       D    KR +
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P VVT+ ++++ LCK+  +D A  +LD+M  +G+ PN  TYNT++ G    
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A EL  +MES+G K    SY + I+ Y K+ +  +A+  +  M  +GI P++   
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L E  ++  A  +F+++ + G++ D+ TY   +    K G I +A +L   +  
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             CE D+   N LI+ L K+GR+  AW++F  L +  L P VVTYNI++ GL  +G++ K
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILK 603

Query: 506 ARDLFLDMEENAAAPDVITFDMLI 529
           A +LF  M E+   P+ ITF+ L+
Sbjct: 604 ALELFGSMTESGCPPNTITFNSLL 627



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 270/552 (48%), Gaps = 51/552 (9%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
            +EA  IF+ + +   SP  V+ +N+L+   +K    D      + + + G  P++   N 
Sbjct: 497  SEAEDIFNDLHKCGLSPDSVT-YNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            LIN   K GRV   +  FGR+      P   T+N L+ GL  E +I++A  LF  +   G
Sbjct: 556  LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            C PN IT+N+L++ L +     +AL +F  M   N      C P+ +TY+TII GL +EG
Sbjct: 616  CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN------CNPDVLTYNTIIYGLIREG 669

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF- 280
             +D A   F QMK + ++PD VT  +LI G+       +A ++ +E + Q    +   F 
Sbjct: 670  RIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFW 728

Query: 281  --------------------------NVIMDE---------LCKNRKMDEASRLLDLMVQ 305
                                      +V  D+         LCK +K  +A  + D   +
Sbjct: 729  GELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTK 788

Query: 306  R-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
              G+ P   +YN LMDG        +A ELF  M+S G   ++ +YN+L++ + K+K + 
Sbjct: 789  NLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN 848

Query: 365  EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            +   LY EM S+G +P  +T+N +   L + + +  AL L+ E+     +    TY   I
Sbjct: 849  KLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI 908

Query: 425  DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            DGL K G   +A+++F  +    C  +   YN LI+G  KSG + FA ELF  +    + 
Sbjct: 909  DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR 968

Query: 485  PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            P++ +Y I+++ LC  G++D+A   F +++     PD ++++ +I+G  +     +   L
Sbjct: 969  PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSL 1028

Query: 545  LHKMKEKKVMPD 556
              +MK + + PD
Sbjct: 1029 FSEMKNRGISPD 1040



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 259/507 (51%), Gaps = 23/507 (4%)

Query: 40  GDINVITP---NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR--------LN 88
           G I+++ P   NEA  ++  M+      P + +++ L+ +L +    DTR        + 
Sbjct: 206 GLIHLLLPGFCNEALKVYKRMIS-EGMKPSMKTYSALMVALGRRG--DTRKIMNLLEEMK 262

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + GL PN+YTY I I    +  R+   +  F  +      P+  T+  LI  L A  ++ 
Sbjct: 263 SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD 322

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
           +A  L+ K++A    P+ +TY TL++   + G        + EM  +G         P+ 
Sbjct: 323 KAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA-------PDV 375

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+ +I+ LCK G VD+A  +   M  + I P++ TYN++I GL  A   +EA  L   
Sbjct: 376 VTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLEN 435

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   GV+P+  ++ + +D   K+    +A    + M +RG+ P+    N  +      G+
Sbjct: 436 MESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGR 495

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I+ AE++F  +   G   D V+YN+L+  Y K  ++++A  L  EM+SKG +P V+  N+
Sbjct: 496 ISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L   L++  +V+ A K+F  ++   +A    TY   + GL K G I++A+ELF ++    
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C  +   +N L+D L K+  +  A ++FC +      P+V+TYN +I GL  +G++D A 
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAF 675

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIR 534
             F  M++   +PD +T   LI G +R
Sbjct: 676 WFFHQMKK-FLSPDYVTLCTLIPGVVR 701



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 158/549 (28%), Positives = 268/549 (48%), Gaps = 27/549 (4%)

Query: 30  VHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD----- 84
           V F D   + GD     P +A   F+ M +     P +++ N  L +LA+          
Sbjct: 449 VLFIDYYGKSGD-----PAKAIDTFETM-KKRGIMPSIAACNASLYTLAETGRISEAEDI 502

Query: 85  -TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
              L+  GL P+  TYN+L+ C+ K G++         ++     P+    NSLI  L+ 
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYK 562

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
             R+  A  +F +LK     P V+TYN L+ GL + G  + AL LF  M          C
Sbjct: 563 AGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG------C 616

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PNT+T+++++D L K   VD A  +F +M   N NPDV+TYN++I+GL      + A  
Sbjct: 617 PPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYA-F 675

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGF 322
            F   M + + P  VT   ++  + ++ ++++A ++ ++ + Q  ++ N+  +  LM+  
Sbjct: 676 WFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELME-- 733

Query: 323 CLMGKINRAEELFGSMESMGCK---HDDVSYNILINGYCKNKEVEEALSLYREMVSK-GI 378
           C++ +    EE     E + C     DD     LI   CK K+  +A +++ +     GI
Sbjct: 734 CILTEA-EIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGI 792

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            PT+ +YN L  GL   +  E AL+LF++M+  G   +  TY   +D   K+  I +  +
Sbjct: 793 HPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYD 852

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L+  +R   CE +   +N +I  L KS  L  A +L+  L  G   P   TY  +I GL 
Sbjct: 853 LYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLL 912

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G+ ++A  +F +M +    P+ + +++LI+GF +  E     EL  KM ++ + PD  
Sbjct: 913 KAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLK 972

Query: 559 IVSIVVDLL 567
             +I+V+ L
Sbjct: 973 SYTILVECL 981



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 220/451 (48%), Gaps = 7/451 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  T+ ++ K L  +  I  A     K+   G   N  +YN LI+ L   G    AL ++
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIH-LLLPGFCNEALKVY 223

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           + M      I    KP+  TYS ++  L + G   K   L  +MK   + P++ TY   I
Sbjct: 224 KRM------ISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICI 277

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
             L  A   ++A  +F EM D+G  P V+T+ V++D LC   K+D+A  L   M      
Sbjct: 278 RALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHS 337

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  TY TLMD F  +G +   +  +  ME  G   D V+Y ILI   CK+ +V+ A  +
Sbjct: 338 PDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDM 397

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
              M +KGI P + TYNT+  GL +  +++ AL+L + M+  GV     +Y  FID   K
Sbjct: 398 LDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGK 457

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +G   +A++ F T++       I A N  +  L ++GR+  A ++F  L    L P+ VT
Sbjct: 458 SGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVT 517

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YN++++     GQ+DKA  L  +M      PDV+  + LI+   +        ++  ++K
Sbjct: 518 YNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             K+ P     +I++  L K    LK+L  F
Sbjct: 578 NLKLAPTVVTYNILLTGLGKEGKILKALELF 608



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 243/513 (47%), Gaps = 48/513 (9%)

Query: 64   PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
            PP   +FN LL  L+KN   D       R+      P++ TYN +I    + GR+   F 
Sbjct: 617  PPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFW 676

Query: 118  AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC-EPNVITYNTLI--- 173
             F + ++   +P+  T  +LI G+    R+ +A  +  +     C + N   +  L+   
Sbjct: 677  FFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECI 735

Query: 174  ------------------NGLCRTGHTMIAL--------------NLFEEMANGNGEIGV 201
                              N +C+  H M+ L              N+F++     G    
Sbjct: 736  LTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLG---- 791

Query: 202  VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
               P   +Y+ ++DGL    F +KA  LF  MK    +P+  TYN L+     +   N+ 
Sbjct: 792  -IHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 262  KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
              L+ EM  +G +P+ +T N+I+  L K+  +++A  L   ++     P  CTY  L+DG
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 322  FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
                G+  +A ++F  M   GC  + V YNILING+ K+ E++ A  L+++MV +GI+P 
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 382  VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            + +Y  L   L    +++ A++ F+E++  G+  DT +Y   I+GL K+  + EA+ LF 
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 442  TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             ++      D+  YN LI  L  +G++  A +++  L    L P+V TYN +I+G    G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSG 1090

Query: 502  QMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              D+A  +F  M     +P+  TF  L + + R
Sbjct: 1091 NKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPR 1123



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 244/528 (46%), Gaps = 23/528 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N ++  L K +  D  L       + G+ P  ++Y + I+ + K G  +     
Sbjct: 408 PNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDT 467

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + +    P+ A  N+ +  L    RI EA  +F  L   G  P+ +TYN L+    +
Sbjct: 468 FETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSK 527

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L  EM      I   C+P+ +  +++I+ L K G VD A  +F ++K+  +
Sbjct: 528 AGQIDKATQLLSEM------ISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P VVTYN L+ GL       +A  LF  M + G  P+ +TFN ++D L KN  +D A +
Sbjct: 582 APTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M      P+  TYNT++ G    G+I+ A   F  M+      D V+   LI G  
Sbjct: 642 MFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVV 700

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG-----LFEIHQVEHALKLFDEMQRDGV 413
           ++  VE+A+ +  E V +    T    N+ F G     +    ++E A+   + +  + V
Sbjct: 701 RHGRVEDAIKVVMEFVHQACLQT----NSQFWGELMECILTEAEIEEAISFAEILVCNSV 756

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
             D       I  LCK    ++A  +F +  + L     +++YNCL+DGL  S   + A 
Sbjct: 757 CQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKAL 816

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ELF  +      PN  TYN+++       +++K  DL+ +M      P+ IT +++I   
Sbjct: 817 ELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISAL 876

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           ++ N  +K  +L +++      P       ++D L+K   S +++  F
Sbjct: 877 VKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIF 924



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 44/346 (12%)

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N +++ L + R++++   + DLM ++ +  N  TY T+     + G I RA      M  
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194

Query: 341 MGCKHDDVSYNILIN----GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           +G   +  SYN LI+    G+C      EAL +Y+ M+S+G+KP++ TY+ L + L    
Sbjct: 195 VGFILNAYSYNGLIHLLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRG 249

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
                + L +EM+  G+  +  TYT  I  L +   I +A  +F+ +    C  D+  Y 
Sbjct: 250 DTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYT 309

Query: 457 CLIDGLCKSGRLKFAWELFCSL------PHGV---------------------------- 482
            LID LC +G+L  A EL+  +      P  V                            
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD 369

Query: 483 -LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+VVTY I+I+ LC  G +D+A D+   M      P++ T++ +I G ++     + 
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            ELL  M+   V P A    + +D   K+    K++ +F   +++G
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 35/296 (11%)

Query: 69   SFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            ++N+LL +  K    NK YD  + + + G  PN  T+NI+I+   K   ++     +  +
Sbjct: 833  TYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYEL 892

Query: 123  LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
            +   F+P   T+  LI GL    R  +A  +F ++  +GC PN + YN LING  ++G  
Sbjct: 893  MSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEI 952

Query: 183  MIALNLFEEMAN-------GNGEIGVVC----------------------KPNTVTYSTI 213
              A  LF++M          +  I V C                       P+TV+Y+ I
Sbjct: 953  DFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFI 1012

Query: 214  IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            I+GL K   +D+A +LF +MK+  I+PD+ TYN+LI  L  A   + A +++ E+   G+
Sbjct: 1013 INGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGL 1072

Query: 274  QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +PSV T+N ++     +   D+A  +   M+  G  PN  T+  L + +   G ++
Sbjct: 1073 EPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 263/525 (50%), Gaps = 18/525 (3%)

Query: 48  NEAFCIFDYMLRMH--PSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTY 99
           ++  C+ + M+ +   P+   VS    L+  L K  + D+      +L   G  PNL+ Y
Sbjct: 305 DDGICLMNEMVELGFVPTEAAVSG---LVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVY 361

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N LIN  CK   +    + +  +       N  T++ LI        +  A + F ++  
Sbjct: 362 NALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIE 421

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G    +  YN+LING C+ G    A  L+ +M N   E      P   T++T+I G CK
Sbjct: 422 DGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLE------PTATTFTTLISGYCK 475

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +  V+KA  L+ +M ++ I P V T+ +LI+GLC  N+  EA +LF EM+++ ++P+ VT
Sbjct: 476 DLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVT 535

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +NV+++  CK   MD+A  LL+ M+  G+ P+  TY  L+ G C  G+++ A++    + 
Sbjct: 536 YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLH 595

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
               K +++ Y+ L++GYC    + EALS   EM+ +GI   +V +  L  G  +   ++
Sbjct: 596 KKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMK 655

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
               L  +M   G+  D+  YT+ ID   K G   ++ E    +   KC  ++  Y   +
Sbjct: 656 RLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFM 715

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +GLCK G +  A  LF  +    + PN VTY   +  L  +G M +A DL  +M +   A
Sbjct: 716 NGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLA 775

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            +  T+++LI GF ++    +  ++L +M E  + PD    S ++
Sbjct: 776 -NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 244/509 (47%), Gaps = 12/509 (2%)

Query: 67  VSSFNILLASLAKN----KHYDTR--LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + ++N+L+  L K     +  + R  L   GL  ++ TY  L+  FC++ +   G     
Sbjct: 253 IVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMN 312

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++   F P  A  + L+ GL  +  I  A  L  KL  FG  PN+  YN LIN LC+  
Sbjct: 313 EMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGE 372

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L++ M + N  +      N VTYS +ID  CK G +D A++ F +M ++ I  
Sbjct: 373 DLDKAELLYKNMHSMNLPL------NDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRE 426

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            +  YNSLI+G C   D + A+ L+ +M+++G++P+  TF  ++   CK+ ++++A +L 
Sbjct: 427 TIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLY 486

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M ++ + P+  T+  L+ G C   ++  A +LF  M     K  +V+YN++I GYCK 
Sbjct: 487 REMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKA 546

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +++A  L  +M+  G+ P   TY  L  GL    +V  A    D++ +  +  +   Y
Sbjct: 547 HNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCY 606

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  + G C  G + EA+     +      +D+  +  LIDG  K   +K  + L   +  
Sbjct: 607 SALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYD 666

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+ V Y  MI     +G   K+ +    M      P+V+T+   ++G  ++ E  +
Sbjct: 667 QGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDR 726

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              L  KM    + P++      +D L K
Sbjct: 727 AGHLFEKMLTANISPNSVTYGCFLDSLTK 755



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 254/512 (49%), Gaps = 14/512 (2%)

Query: 65  PPVSSFNILLASLAKNKHY-------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V + + +L  L + + +       D  +NA G+ P+ YT + +I   C++        
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNA-GVKPDPYTCSAVIRSLCELKDFCRAKE 239

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +  + F  +  T+N LI GL     ++EA  +   L+  G + +V+TY TL+ G C
Sbjct: 240 KILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFC 299

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R       + L  EM     E+G V  P     S ++DGL K+G +D A  L +++    
Sbjct: 300 RVQQFDDGICLMNEMV----ELGFV--PTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P++  YN+LI+ LC   D ++A+ L+  M    +  + VT+++++D  CK   +D A 
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
                M++ G+R     YN+L++G C  G ++ AE L+  M + G +    ++  LI+GY
Sbjct: 414 SYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGY 473

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+ +VE+A  LYREM  K I P+V T+  L  GL   +++  A KLFDEM    +    
Sbjct: 474 CKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTE 533

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   I+G CK   + +A EL   +       D   Y  LI GLC +GR+  A +    
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L    L  N + Y+ ++ G C  G++ +A     +M +     D++   +LI G ++  +
Sbjct: 594 LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQD 653

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             ++  LL KM ++ + PD+ I + ++D   K
Sbjct: 654 MKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSK 685



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 222/441 (50%), Gaps = 6/441 (1%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P + T + ++N   +I +  L +  F   + +   P+  T +++I+ L        A 
Sbjct: 179 LLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAK 238

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                +++   + +++TYN LI+GLC+ G  + AL + + +     E G+  K + VTY 
Sbjct: 239 EKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLR----EKGL--KEDVVTYC 292

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++ G C+    D    L  +M +    P     + L+ GL    + + A  L +++   
Sbjct: 293 TLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRF 352

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P++  +N +++ LCK   +D+A  L   M    +  N  TY+ L+D FC  G ++ A
Sbjct: 353 GFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVA 412

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E  FG M   G +     YN LING+CK  ++  A  LY +M+++G++PT  T+ TL  G
Sbjct: 413 ESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISG 472

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  QVE A KL+ EM    +A    T+T  I GLC    + EA +LF  +   K +  
Sbjct: 473 YCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPT 532

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YN +I+G CK+  +  A+EL   + H  LVP+  TY  +I GLC+ G++  A+D   
Sbjct: 533 EVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFID 592

Query: 512 DMEENAAAPDVITFDMLIHGF 532
           D+ +     + + +  L+HG+
Sbjct: 593 DLHKKNLKLNEMCYSALLHGY 613



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 239/517 (46%), Gaps = 54/517 (10%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           T++   GL P   T+  LI+ +CK  +V   F  +  +      P+  TF +LI GL + 
Sbjct: 452 TKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCST 511

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           + + EA+ LF ++     +P  +TYN +I G C+  +   A  L E+M + NG +     
Sbjct: 512 NEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH-NGLV----- 565

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA--- 261
           P+T TY  +I GLC  G V  AK     +  +N+  + + Y++L+HG C      EA   
Sbjct: 566 PDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSA 625

Query: 262 -----------------------------KRLF---IEMMDQGVQPSVVTFNVIMDELCK 289
                                        KRLF    +M DQG++P  V +  ++D   K
Sbjct: 626 SCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSK 685

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
                ++   LDLMV     PN  TY   M+G C +G+I+RA  LF  M +     + V+
Sbjct: 686 EGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVT 745

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y   ++   K   ++EA  L+ EM+ KG+     TYN L  G  ++ ++  A K+  EM 
Sbjct: 746 YGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMT 804

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
            +G+  D  TY+T I   C++G +  AVEL+ T+     E D  A+N LI G C +G L 
Sbjct: 805 ENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALD 864

Query: 470 FAWELFCSLPHGVLVPNVVTY---------NIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            A+EL   +    L P  +           N ++ G C  G++D A  L+  M   A   
Sbjct: 865 KAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKL 924

Query: 521 DVITFD---MLIHGFIRINEPSKVNELLHKMKEKKVM 554
            +  +    +L +G I  +E  +VNE + K +  K +
Sbjct: 925 SLEMWKCLYLLSYGVISKSEELEVNESITKRRIGKAL 961



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 225/461 (48%), Gaps = 6/461 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           F +   ++ L++ + +  RV    +    +L +   P   T ++++ GL    + +    
Sbjct: 145 FSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWE 204

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F +    G +P+  T + +I  LC       A      M +   ++ +V      TY+ 
Sbjct: 205 VFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIV------TYNV 258

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I GLCK G V +A  +   ++++ +  DVVTY +L+ G C    +++   L  EM++ G
Sbjct: 259 LIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELG 318

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P+    + ++D L K   +D A  L+  + + G  PN   YN L++  C    +++AE
Sbjct: 319 FVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAE 378

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L+ +M SM    +DV+Y+ILI+ +CK   ++ A S +  M+  GI+ T+  YN+L  G 
Sbjct: 379 LLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGH 438

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +   +  A  L+ +M  +G+     T+TT I G CK+  + +A +L+R +   +    +
Sbjct: 439 CKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSV 498

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             +  LI GLC +  +  A +LF  +    + P  VTYN+MI+G C    MDKA +L  D
Sbjct: 499 YTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLED 558

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           M  N   PD  T+  LI G       S   + +  + +K +
Sbjct: 559 MLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNL 599



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 199/425 (46%), Gaps = 23/425 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           EA  +FD M+     P  V+ +N+++    K  + D            GL P+ YTY  L
Sbjct: 516 EASKLFDEMVERKIKPTEVT-YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C  GRVS        + +     N   +++L+ G   + R+ EA +   ++   G 
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             +++ +  LI+G  +         L ++M +         +P++V Y+++ID   KEG 
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG------LRPDSVIYTSMIDAYSKEGS 688

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             K+      M  E   P+VVTY + ++GLC   + + A  LF +M+   + P+ VT+  
Sbjct: 689 FKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGC 748

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +D L K   M EA+ L   M+ +G+  N  TYN L+ GFC +G++  A ++   M   G
Sbjct: 749 FLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENG 807

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++Y+ +I  +C++ +V  A+ L+  M+ KG++P  V +N L  G      ++ A 
Sbjct: 808 IFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAF 867

Query: 403 KLFDEMQRDGVAA---------DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +L ++M   G+           D       + G C  G +  A+ L+ ++     +L ++
Sbjct: 868 ELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLE 927

Query: 454 AYNCL 458
            + CL
Sbjct: 928 MWKCL 932



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 177/399 (44%), Gaps = 36/399 (9%)

Query: 203 CK-PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           CK  +T+ +  ++    +   V  A  +   M    + P+V T +++++GL     +   
Sbjct: 143 CKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILV 202

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             +F E ++ GV+P   T + ++  LC+ +    A   +  M       +  TYN L+ G
Sbjct: 203 WEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHG 262

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  G +  A E+  S+   G K D V+Y  L+ G+C+ ++ ++ + L  EMV  G  PT
Sbjct: 263 LCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPT 322

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
               + L  GL +   ++ A  L  ++ R G   +   Y   I+ LCK   + +A  L++
Sbjct: 323 EAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYK 382

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL----------PHGVLV------- 484
            +  +   L+   Y+ LID  CK G L  A   F  +          P+  L+       
Sbjct: 383 NMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFG 442

Query: 485 ------------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                             P   T+  +I G C D Q++KA  L+ +M E   AP V TF 
Sbjct: 443 DLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFT 502

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            LI+G    NE ++ ++L  +M E+K+ P     +++++
Sbjct: 503 ALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIE 541



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 1/290 (0%)

Query: 246 NSLIHGLC-HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           NSL+H L    +D       F+E   Q    S + F+ ++    +N ++ +A  +L LM+
Sbjct: 116 NSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLML 175

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
              + P   T + +++G   + K     E+F    + G K D  + + +I   C+ K+  
Sbjct: 176 GNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFC 235

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A      M S     ++VTYN L  GL +   V  AL++   ++  G+  D  TY T +
Sbjct: 236 RAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLV 295

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            G C+     + + L   +  L       A + L+DGL K G +  A++L   L     +
Sbjct: 296 LGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFL 355

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           PN+  YN +I  LC    +DKA  L+ +M       + +T+ +LI  F +
Sbjct: 356 PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCK 405



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 17/242 (7%)

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL----------FLGL-F 393
           H   S+ IL++   +NK    A SL   ++ +G  P  V    L           LG  F
Sbjct: 94  HTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDF 153

Query: 394 EIHQVEHALKLFDE------MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
            +H      ++FD       M  + +  + RT +  ++GL +    I   E+F       
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAG 213

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            + D    + +I  LC+      A E    +       ++VTYN++I GLC  G + +A 
Sbjct: 214 VKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEAL 273

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           ++   + E     DV+T+  L+ GF R+ +      L+++M E   +P  + VS +VD L
Sbjct: 274 EVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGL 333

Query: 568 VK 569
            K
Sbjct: 334 RK 335


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 248/494 (50%), Gaps = 12/494 (2%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           + NI++ S  K+  +D      + +    +FP++ T+N+LI+   + G V         +
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P   TFNS++KGL    R  +A  +F  +      P+V ++N LI G CR G  
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+  ++EM     + GV   P+ V++S +I      G +D A A   +MK   + PD 
Sbjct: 279 EEAMKFYKEMQ----QRGVT--PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V Y  +I G C A   +EA R+  EM+  G  P VVT+N +++ LCK  ++ +A  LL+ 
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +RGV P+ CT+ TL+ G+C  G   +A +LF ++     + D V+YN LI+G C+  +
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + +A  L+ +M ++ I P  VTY+ L     E  QVE A    DEM   G   +  TY +
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G C++G + +  +  + +       D+  +N LI G  K   +  A+ +F  +   +
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+ VTYN++I G    G M++A  +F  M  +   PD  T+  LI+G +      +  
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAF 632

Query: 543 ELLHKMKEKKVMPD 556
           +L  +M  +   PD
Sbjct: 633 QLHDEMMHRGFAPD 646



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 234/458 (51%), Gaps = 6/458 (1%)

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G   L   A+  +L S    NA T N ++          +A  + ++++     P+V+
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T+N LI+   R G    A+ L + MAN         KP  VT+++++ GLCK    DKAK
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKG------LKPGIVTFNSVLKGLCKHRRFDKAK 247

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F  M   ++ PDV ++N LI G C   +  EA + + EM  +GV P VV+F+ ++   
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLF 307

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
               KMD A+  L  M   G+ P+   Y  ++ GFC  G ++ A  +   M  +GC  D 
Sbjct: 308 STRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDV 367

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+YN L+NG CK   + +A  L  EM  +G+ P + T+ TL  G       E AL+LFD 
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           +    +  D   Y + IDG+C+ G + +A EL+  +   +   +   Y+ LID  C+ G+
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A+     +     +PN++TYN +I+G C  G + K +     M ++   PD+ITF+ 
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           LIHG+I+         + + M+++ V PDA   +++++
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIIN 585



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 227/424 (53%), Gaps = 6/424 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           E N  T N +++  C++     A  +  EM            P+ VT++ +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEK------RCVFPDVVTHNVLIDARFRAGD 207

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A AL   M ++ + P +VT+NS++ GLC    +++AK +F  M    V P V +FN+
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++   C+  +++EA +    M QRGV P+  +++ L+  F   GK++ A      M+ +G
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D V Y ++I G+C+   + EAL +  EMV  G  P VVTYNTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L +EM+  GV  D  T+TT I G C++G   +A++LF TL   +   D+ AYN LIDG+
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+ G L  A EL+  +    + PN VTY+I+I   C  GQ+++A     +M      P++
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           +T++ +I G+ R     K  + L KM +  ++PD    + ++   +K E    +   F +
Sbjct: 508 MTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNI 567

Query: 583 QERQ 586
            E++
Sbjct: 568 MEKE 571



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 228/463 (49%), Gaps = 8/463 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N YT NI+++ +CK             + + C  P+  T N LI        +  A AL 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +   G +P ++T+N+++ GLC+      A  +F  M   +        P+  +++ +I
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS------VAPDVRSFNILI 269

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G C+ G V++A   + +M+   + PDVV+++ LI         + A     EM   G+ 
Sbjct: 270 GGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLV 329

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P  V + +++   C+   M EA R+ D MV  G  P+  TYNTL++G C   ++  AEEL
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEEL 389

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M+  G   D  ++  LI+GYC++   E+AL L+  ++ + ++P VV YN+L  G+  
Sbjct: 390 LNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCR 449

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQ 453
              +  A +L+D+M    +  +  TY+  ID  C+ G + EA      + + K  L +I 
Sbjct: 450 KGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEM-VSKGNLPNIM 508

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN +I G C+SG +K   +    +    ++P+++T+N +I G   +  M  A ++F  M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIM 568

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           E+    PD +T++M+I+GF       +   +  KM    + PD
Sbjct: 569 EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPD 611



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 190/360 (52%), Gaps = 12/360 (3%)

Query: 65  PPVSSFNILL---ASLAKNKH---YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V SF+ L+   ++  K  H   Y   +   GL P+   Y ++I  FC+ G +S     
Sbjct: 295 PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     P+  T+N+L+ GL  + R+++A  L  ++K  G  P++ T+ TLI+G CR
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   AL LF+ + +         +P+ V Y+++IDG+C++G + KA  L+  M    I
Sbjct: 415 DGNFEKALQLFDTLLHQR------LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VTY+ LI   C      EA     EM+ +G  P+++T+N I+   C++  + +  +
Sbjct: 469 FPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQ 528

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L  M+Q  + P+  T+NTL+ G+     ++ A  +F  ME    + D V+YN++ING+ 
Sbjct: 529 FLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFS 588

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   +EEA  ++++M + GI+P   TY +L  G       + A +L DEM   G A D +
Sbjct: 589 EQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 253/488 (51%), Gaps = 9/488 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+++ N  ++  C++ R       F   +     PN  T+  LI+G  +   +  A  L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++K+ G E N + + TL+ GLC  G  + AL  F  MA         C P+ +TY+ ++
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-------CAPDVMTYTALV 133

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             LCK G  D+A+ +  +M  +   PD VT+++LI GLC      +A R+  +++ +G+ 
Sbjct: 134 HALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMG 193

Query: 275 PSVVTFNVIMDELC-KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            S   F  I+  LC K   ++ AS++L +++ +G  P    +N +++GFC    ++ A +
Sbjct: 194 NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYK 253

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M   GC  +  ++ ILI G CK   V EA  L  +MV  G  P VVTY+T+  GL 
Sbjct: 254 LLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLC 313

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  QV+ A +LF  M+R     +  T+   IDGLCK   I EA +L+  +R   C  DI 
Sbjct: 314 KQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 373

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPH-GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            YN LIDGLCKS ++  A++LF ++P  GV   N VTY+ +  G    G+M  A  +F  
Sbjct: 374 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 433

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           + +   +PD+ T+  LI  + + +   +V EL+ +M  K   P  + +S V+  L +   
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 493

Query: 573 SLKSLPSF 580
           + +++  F
Sbjct: 494 TERAIQLF 501



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/585 (29%), Positives = 273/585 (46%), Gaps = 70/585 (11%)

Query: 28  LLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL 87
           L++ F D        NV + N   C  D + R++     ++ F   +A +          
Sbjct: 6   LVLLFFDWARSRVGHNVFSCN---CALDMLCRLNRRQEALALFRNAMARIC--------- 53

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
                 PN +TY ILI  F   G + +       +  S F  NA    +L+KGL    R+
Sbjct: 54  -----MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRV 108

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +EA   F  + A  C P+V+TY  L++ LC+ G    A  +  EM      +   C P+T
Sbjct: 109 VEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREM------VAQGCAPDT 161

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKD-------------------------------- 235
           VT+ST+IDGLCK G  ++A   F  ++D                                
Sbjct: 162 VTFSTLIDGLCKFGSEEQA---FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASK 218

Query: 236 -------ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
                  +   P V+ +N +I+G C A D + A +L   M+++G  P+V TF +++  LC
Sbjct: 219 VLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLC 278

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K  ++ EA +LL+ MV  G  PN  TY+T+++G C  G+++ A ELF  ME   C  + V
Sbjct: 279 KANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVV 338

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           ++NILI+G CK K +EEA  LY  M   G  P ++TYN+L  GL +  QV+ A +LF  +
Sbjct: 339 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398

Query: 409 QRDGV-AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
              GV AA+  TY+T   G    G + +A  +F  L       D+  Y  LI   CK+ R
Sbjct: 399 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 458

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
                EL   +      P V T + ++ GL      ++A  LF  M       D + +++
Sbjct: 459 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 518

Query: 528 LIHGFIRINEPSKVNELLHKM---KEKKVMPDASIVSIVVDLLVK 569
           ++ G  R ++  K   +L ++   +++K  P +S V  +V+ L +
Sbjct: 519 VVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 563



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 169/573 (29%), Positives = 252/573 (43%), Gaps = 87/573 (15%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR------- 111
           P V ++  L+ +L K   +D        + A G  P+  T++ LI+  CK G        
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183

Query: 112 -----------------------------VSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
                                        V L     G ++   FTP    FN +I G  
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               +  A  L   +   GC PNV T+  LI GLC+      A  L E+M  G       
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG------ 297

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C PN VTYST+I+GLCK+G VD A  LF  M+  N  P+VVT+N LI GLC A    EA+
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP-NACTYNTLMDG 321
           +L+  M + G  P ++T+N ++D LCK+ ++DEA +L   + + GV   NA TY+TL  G
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G++  A  +F  +   G   D  +Y  LI  YCK     E + L  EM SKG  P 
Sbjct: 418 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG--------------- 426
           V T + +  GLFE +  E A++LFD M   G   D   Y   ++G               
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE 537

Query: 427 -----------------------LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
                                  LC+ G   +A +L   +        + +YN L+ GL 
Sbjct: 538 QVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLS 597

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +  R   A ++F ++      P + T N++I  LC+  ++D A +L   M +    PD+ 
Sbjct: 598 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 657

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           T + LI G+ +        +LL +M E  + P+
Sbjct: 658 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 690



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 231/479 (48%), Gaps = 45/479 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P +  +N++IN FCK   +   +     ++     PN  TF  LI GL   +R+ 
Sbjct: 225 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 284

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  L  K+   GC PNV+TY+T+INGLC+ G    A  LF+ M   N      C PN V
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN------CPPNVV 338

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T++ +IDGLCK   +++A+ L+ +M++    PD++TYNSLI GLC +   +EA +LF  +
Sbjct: 339 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398

Query: 269 MDQGVQPS-VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
            + GV  +  VT++ +        +M +A R+  ++V +G  P+  TY +L+  +C   +
Sbjct: 399 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 458

Query: 328 -----------------------------------INRAEELFGSMESMGCKHDDVSYNI 352
                                                RA +LF SM + GC  D + YN+
Sbjct: 459 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 518

Query: 353 LINGYCKNKEVEEALSLYREMVSK---GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           ++ G  +  + ++AL++  +++ K      P+    + L   L ++ + + A +L  +M 
Sbjct: 519 VVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMS 578

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G AA   +Y   + GL +     EA ++F  +       +I   N +I  LC + ++ 
Sbjct: 579 ERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVD 638

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            A+EL   +      P++ T N +I G C  G+ D AR L  +M E    P+  T D+L
Sbjct: 639 DAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 52/386 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A+ +F  M R +  PP V + NIL+  L K K  +       R+  TG  P++ TYN 
Sbjct: 319 DDAYELFQLMERRN-CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           LI+  CK  +V   F  F  I  S  +  NA T+++L  G  A  R+ +A  +F+ L   
Sbjct: 378 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 437

Query: 161 GCEPNVITYNTLINGLCRTG-----------------------------------HTMIA 185
           G  P++ TY +LI   C+T                                    HT  A
Sbjct: 438 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 497

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM---KDENINPDV 242
           + LF+ MA         C  + + Y+ +++G+ +    DKA A+  Q+   +D   NP  
Sbjct: 498 IQLFDSMAARG------CTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSS 551

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
              ++L+  LC     ++AK+L  +M ++G   +V ++N ++  L + ++ DEA+++ + 
Sbjct: 552 SAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEA 611

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV  G  P   T N ++   C   K++ A EL   M  +GC  D  + N LI GYCK+  
Sbjct: 612 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 671

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTL 388
            + A  L  EM   G++P   T++ L
Sbjct: 672 ADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 162/385 (42%), Gaps = 72/385 (18%)

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           D  E   LF +     V  +V + N  +D LC+  +  EA  L    + R   PN  TY 
Sbjct: 2   DKPELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYG 61

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L+ GF   G ++ A +L   M+S G + + V +  L+ G C    V EAL  +R M +K
Sbjct: 62  ILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AK 120

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
              P V+TY  L   L +  + + A  +  EM   G A DT T++T IDGLCK G   +A
Sbjct: 121 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180

Query: 437 VEL---------------FRTLRILKC------EL---------------DIQAYNCLID 460
             +               F T+    C      EL                +  +N +I+
Sbjct: 181 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 240

Query: 461 GLCKSGRLKFAWELF-------C----------------------------SLPHGVLVP 485
           G CK+  L  A++L        C                             +  G   P
Sbjct: 241 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSP 300

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NVVTY+ +I GLC  GQ+D A +LF  ME     P+V+T ++LI G  +     +  +L 
Sbjct: 301 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 360

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKN 570
           H+M+E    PD    + ++D L K+
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKS 385


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/470 (32%), Positives = 238/470 (50%), Gaps = 8/470 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++  YN ++         S     F  +L     PN  T+N L++ L       EA
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRF-FDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            ++   ++  GC+PN +TYNTL+   CR G    A  L + M  G        KPN VT+
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG------LKPNLVTF 230

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +++++G+CK G ++ A+ +F +M  E + PD V+YN+L+ G C     +EA  +F EM  
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P VVTF  ++  +CK   ++ A  L+  M +RG++ N  T+  L+DGFC  G ++ 
Sbjct: 291 KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A      M     +   V YN LINGYC    ++EA  L REM +KG+KP VVTY+T+  
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
              +      A +L  +M  +GV  D  TY++ I  LC+   + +A  LF+ +  L  + 
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  LIDG CK G ++ A  L   +    ++P+VVTY+++I GL    +  +A+ L 
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
             +      P  I +D L+    R  E   V  LL     K +M +A  V
Sbjct: 531 FKLYHEEPVPANIKYDALMR-CCRNAELKSVLALLKGFCMKGLMNEADKV 579



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 261/552 (47%), Gaps = 51/552 (9%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFC 107
           FD ML      P V ++NIL+ +L    H    L+        G  PN  TYN L+  FC
Sbjct: 145 FDSMLS-DGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFC 203

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G V         +      PN  TFNS++ G+    R+ +A  +F ++   G  P+ +
Sbjct: 204 RAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV 263

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGN---------GEIGVVCKP------------- 205
           +YNTL+ G C+ G +  AL++F EM               I V+CK              
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323

Query: 206 -------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                  N +T++ +IDG CK+GF+D A     +M+   I P VV YN+LI+G C     
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA+ L  EM  +GV+P VVT++ I+   CKN     A +L   M++ GV P+A TY++L
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSL 443

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C   ++  A  LF +M S+G + D+V+Y  LI+G+CK   VE ALSL+ EMV  G+
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKL---------------FDEMQRDGVAADTRTYTTF 423
            P VVTY+ L  GL +  + + A +L               +D + R    A+ ++    
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G C  G + EA ++++++      LD   Y+ LI G C+ G +  A      +     
Sbjct: 564 LKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGF 623

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN  +   +I+GL   G + +A  +   +    +  D      LI   ++      V +
Sbjct: 624 APNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLD 683

Query: 544 LLHKMKEKKVMP 555
           +LH M    ++P
Sbjct: 684 VLHGMARDGLLP 695



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 187/361 (51%), Gaps = 1/361 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ + Y+ ++  L  +  +  A+  F  M  + + P+V TYN L+  LC      EA  +
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M   G  P+ VT+N ++   C+  ++D A RL+D+M + G++PN  T+N++++G C 
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G++  A ++F  M   G   D VSYN L+ GYCK     EALS++ EM  KGI P VVT
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           + +L   + +   +E A+ L  EM+  G+  +  T+T  IDG CK G++ +A+   R +R
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
             + +  +  YN LI+G C  GR+  A EL   +    + P+VVTY+ ++   C +G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  L   M EN   PD IT+  LI            + L   M    + PD    + ++
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 565 D 565
           D
Sbjct: 480 D 480



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 182/332 (54%), Gaps = 1/332 (0%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P V+ YN+++  L  A+    A+R F  M+  GV P+V T+N+++  LC      EA  +
Sbjct: 121 PSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L  M   G  PNA TYNTL+  FC  G+++RAE L   M   G K + V++N ++NG CK
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              +E+A  ++ EMV +G+ P  V+YNTL  G  ++     AL +F EM R G+  D  T
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           +T+ I  +CK G +  AV L R +R    +++   +  LIDG CK G L  A      + 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P+VV YN +I G C  G+MD+AR+L  +ME     PDV+T+  ++  + +  +  
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L  +M E  V+PDA   S ++ +L + +
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 205/426 (48%), Gaps = 30/426 (7%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLF 93
           G   V   +EA  +F  M R     P V +F  L+  + K  + +        +   GL 
Sbjct: 271 GYCKVGCSHEALSVFAEMTR-KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQ 329

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAA 152
            N  T+  LI+ FCK G +    +A  R +R C   P+   +N+LI G     R+ EA  
Sbjct: 330 MNEITFTALIDGFCKKGFLDDALLAV-REMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  +++A G +P+V+TY+T+++  C+ G T  A  L ++M     E GV+  P+ +TYS+
Sbjct: 389 LVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML----ENGVL--PDAITYSS 442

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I  LC+E  +  A  LF  M    + PD VTY SLI G C   +   A  L  EM+  G
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM------------- 319
           V P VVT++V+++ L K+ +  EA RLL  +      P    Y+ LM             
Sbjct: 503 VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLA 562

Query: 320 --DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
              GFC+ G +N A++++ S+       D   Y++LI+G+C+   V +ALS +++M+  G
Sbjct: 563 LLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P   +  +L  GLFE   V  A ++  ++      AD       ID   K G +   +
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVL 682

Query: 438 ELFRTL 443
           ++   +
Sbjct: 683 DVLHGM 688



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 36/211 (17%)

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P+V+ YN + L L +   +  A + FD M  DGVA +  TY                
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTY---------------- 160

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
                              N L+  LC  G  K A  +   +      PN VTYN ++  
Sbjct: 161 -------------------NILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAA 201

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C  G++D+A  L   M E    P+++TF+ +++G  +        ++  +M ++ + PD
Sbjct: 202 FCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPD 261

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               + +V    K   S ++L  F    R+G
Sbjct: 262 GVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 252/512 (49%), Gaps = 16/512 (3%)

Query: 47  PNEAFCIFDYM--LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYT 98
           P  +  +F  +  LR+HP+     +FN+L+       +LA      + +   GL P+  T
Sbjct: 189 PQASLDVFRSLIELRLHPN---HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVT 245

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           YN L+N  C+ G +        R+ R    P   T+N+L+        I +A  +   + 
Sbjct: 246 YNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT 305

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A+G EP++ TYN L  GLC+ G    A  L +EM   +  +     P+ VTY+T++D   
Sbjct: 306 AYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL-----PDVVTYNTLVDACF 360

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K      A  L  +M+D+ + P +VT+N ++  LC      EA     ++ ++G+ P V+
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++D  CK   + +A  L+D MV +G++ +  T NT++   C M +   AEEL  S 
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D+VSY  ++  Y K    E AL L+ +M+ + + P++ TYNTL  GL  + ++
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A+   +E+   G+  D  TY   I   CK G +  A      +     + D+   N L
Sbjct: 541 KEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           ++GLC  G+L  A +LF S        +V+TYN +IQ +C  G +D A   F DME    
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            PD  T+++++          + + +LHK+ +
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 210/419 (50%), Gaps = 10/419 (2%)

Query: 150 AAALFTKLKAF-GCEPNVITYNTLINGLCRTGHTM--IALNLFEEMANGNGEIGVVCKPN 206
           AA L   L+   G  P++   N +++ L R+  T+   +L++F  +      I +   PN
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL------IELRLHPN 207

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             T++ ++   C +G +  A A    M+   ++PD VTYN+L++  C      EA+ L  
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G+ P+  T+N ++    +   + +A+++++ M   G  P+  TYN L  G C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAG 327

Query: 327 KINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           K++ A  L   ME +     D V+YN L++   K +   +AL L  EM  KG+KPT+VT+
Sbjct: 328 KVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +   L +  ++E AL   +++  +G+A D  TY T ID  CK G + +A  L   +  
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              ++D    N ++  LCK  R + A EL  S P    VP+ V+Y  ++     +   + 
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           A  L+  M E    P + T++ LI G  R+    +  + L+++ EK ++PD +  +I++
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIII 566



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 53/290 (18%)

Query: 47  PNEAFCIFDYML--RMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYT 98
           P  A  ++D M+  ++ PS   +S++N L+  L + +     ++        GL P+  T
Sbjct: 505 PEPALRLWDQMIERKLIPS---ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETT 561

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           YNI+I+ +CK G +   F    +++ + F P+  T N+L+ GL    ++ +A  LF    
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G + +VITYNTLI  +C+ G    AL+ F++M     E+  + +P+  TY+ ++  L 
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM-----EVKGL-QPDAFTYNVVLSALS 675

Query: 219 KEGFVDKAKALFLQMKDEN----------INPDVV------------------------- 243
           + G  ++A  +  ++ D            + P                            
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 244 -TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            TY   ++GLC      EAK +  EMM +G+     T+  +M+ L K +K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 247/494 (50%), Gaps = 17/494 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++ +L    ++D       R+ A G+ P+L+T+ I +  FC   R  +   
Sbjct: 83  PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIAL- 141

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              R+LR+     A  + +++ GL+A     +A  LF ++      PN+  +N +++ LC
Sbjct: 142 ---RLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALC 198

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G  + A  L  ++      I      N  TY+  I GLC+ G + +A  L   M+   
Sbjct: 199 KRGDVLEAGLLLGKVIQRGMSI------NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 252

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PDVVTYN+LI GLC  +   EA      MM+QG  P   T+N I+D  CK   + EA+
Sbjct: 253 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 311

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL   V +G  P+  TY +L++G C  G + RA ELF   ++ G K D V YN L+ G 
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 371

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    +  AL +  EM  +G  P + TYN +  GL ++  +  A  + ++    G   D 
Sbjct: 372 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 431

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+ T IDG CK   +  A++L   +       D   YN +++GLCK+G++    E F  
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      PN +TYNI+I+  C   +M++A  + + M +    PD ++F+ LI+GF R  +
Sbjct: 492 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 551

Query: 538 PSKVNELLHKMKEK 551
                 L  K++EK
Sbjct: 552 LEGAYLLFQKLEEK 565



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/540 (29%), Positives = 255/540 (47%), Gaps = 12/540 (2%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNILINCFCKIGR 111
           +LR  P    V+   ++    A    +D R     +  T +FPNL  +N +++  CK G 
Sbjct: 143 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 202

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V    +  G++++   + N  T+N  I+GL    R+ EA  L   ++A+   P+V+TYNT
Sbjct: 203 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNT 261

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI GLC+      A++    M N        C P+  TY+TIIDG CK   V +A  L  
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQG------CLPDDFTYNTIIDGYCKISMVQEATELLK 315

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
               +   PD VTY SLI+GLC   D   A  LF E   +G++P +V +N ++  LC   
Sbjct: 316 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 375

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +  A ++++ M + G  P+  TYN +++G C MG I+ A  +       G   D  ++N
Sbjct: 376 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+GYCK  +++ AL L   M   GI P  +TYN++  GL +  +V    + F EM   
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  TY   I+  C++  + EA ++   +       D  ++N LI G C++G L+ A
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           + LF  L          T+N +I        M  A  +F +M       D  T+ +LI G
Sbjct: 556 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
             +     +    L +M +K  +P  S    V++ L  N    +++    +  + G V E
Sbjct: 616 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 675



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 251/517 (48%), Gaps = 49/517 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +FD ML  H  P  +++FN +L +L K            ++   G+  NL+TYNI
Sbjct: 169 HDARQLFDQMLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I   C+ GR+    +     +R+   P+  T+N+LI+GL  +S   EA     ++   G
Sbjct: 228 WIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 162 CEPNVITYNT-----------------------------------LINGLCRTGHTMIAL 186
           C P+  TYNT                                   LINGLC  G    AL
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 346

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            LF E A   G      KP+ V Y++++ GLC +G +  A  +  +M +E  +PD+ TYN
Sbjct: 347 ELFNE-AQAKG-----IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            +I+GLC   + ++A  +  + + +G  P V TFN ++D  CK  K+D A +L++ M + 
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P+  TYN++++G C  GK+N   E F  M   GC  + ++YNILI  +C++ ++EEA
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             +  +M  +G+ P  V++NTL  G      +E A  LF +++  G +A   T+ T I  
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 580

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
                 +  A ++F  +       D   Y  LIDG CK+  +  A+     +     +P+
Sbjct: 581 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 640

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           + T+  +I  L  + ++ +A  +   M +    P+V+
Sbjct: 641 MSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 218/453 (48%), Gaps = 47/453 (10%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L K        HY  R+   G  P+ +TYN +I+ +CKI  V      
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               +   F P+  T+ SLI GL AE  +  A  LF + +A G +P+++ YN+L+ GLC 
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373

Query: 179 TGHTMIALNLFEEMANG---------NGEIGVVCK--------------------PNTVT 209
            G  + AL +  EMA           N  I  +CK                    P+  T
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++T+IDG CK   +D A  L  +M +  I PD +TYNS+++GLC A   NE    F EM+
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P+ +T+N++++  C++ KM+EAS+++  M Q G+ P+A ++NTL+ GFC  G + 
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  +E  G      ++N LI  +     +  A  ++ EM+SKG +    TY  L 
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL------ 443
            G  +   V+ A     EM + G      T+   I+ L  N  + +AV +   +      
Sbjct: 614 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 673

Query: 444 -----RILKCE-LDIQAYNCLIDGLCKSGRLKF 470
                 IL  +  +I A   L++ L K G + +
Sbjct: 674 PEVVDTILNADKKEIAAPKILVEDLMKKGHISY 706



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 198/432 (45%), Gaps = 38/432 (8%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           Y   I    R G    A++ FE M          C P    Y+ I+D L    + D+A  
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDL------FACPPAAPAYNAIMDALVDAAYHDQAHK 107

Query: 229 LFLQMKDENINPDV-------------------------------VTYNSLIHGLCHAND 257
           ++++M    ++PD+                               V Y +++ GL     
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 167

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
            ++A++LF +M+   V P++  FN ++  LCK   + EA  LL  ++QRG+  N  TYN 
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
            + G C  G++  A  L   M +     D V+YN LI G CK    +EA+   R M+++G
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P   TYNT+  G  +I  V+ A +L  +    G   D  TY + I+GLC  G +  A+
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 346

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           ELF   +    + DI  YN L+ GLC  G +  A ++   +      P++ TYNI+I GL
Sbjct: 347 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G +  A  +  D       PDV TF+ LI G+ +  +     +L+ +M E  + PD 
Sbjct: 407 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 466

Query: 558 SIVSIVVDLLVK 569
              + V++ L K
Sbjct: 467 ITYNSVLNGLCK 478



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 147/333 (44%), Gaps = 5/333 (1%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y + I     A    +A   F  M      P+   +N IMD L      D+A ++   M+
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             GV P+  T+   +  FCL  + + A  L  ++   G     V+Y  ++ G   +    
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 169

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L+ +M+   + P +  +N +   L +   V  A  L  ++ + G++ +  TY  +I
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GLC+ G + EAV L   +R      D+  YN LI GLCK    + A      + +   +
Sbjct: 230 RGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+  TYN +I G C    + +A +L  D       PD +T+  LI+G     +  +  EL
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            ++ + K + PD  + + +V  L    + L +L
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 247/494 (50%), Gaps = 17/494 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++ +L    ++D       R+ A G+ P+L+T+ I +  FC   R  +   
Sbjct: 82  PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIAL- 140

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              R+LR+     A  + +++ GL+A     +A  LF ++      PN+  +N +++ LC
Sbjct: 141 ---RLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALC 197

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G  + A  L  ++      I      N  TY+  I GLC+ G + +A  L   M+   
Sbjct: 198 KRGDVLEAGLLLGKVIQRGMSI------NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 251

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PDVVTYN+LI GLC  +   EA      MM+QG  P   T+N I+D  CK   + EA+
Sbjct: 252 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 310

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL   V +G  P+  TY +L++G C  G + RA ELF   ++ G K D V YN L+ G 
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 370

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    +  AL +  EM  +G  P + TYN +  GL ++  +  A  + ++    G   D 
Sbjct: 371 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 430

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+ T IDG CK   +  A++L   +       D   YN +++GLCK+G++    E F  
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      PN +TYNI+I+  C   +M++A  + + M +    PD ++F+ LI+GF R  +
Sbjct: 491 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 550

Query: 538 PSKVNELLHKMKEK 551
                 L  K++EK
Sbjct: 551 LEGAYLLFQKLEEK 564



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/540 (29%), Positives = 255/540 (47%), Gaps = 12/540 (2%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNILINCFCKIGR 111
           +LR  P    V+   ++    A    +D R     +  T +FPNL  +N +++  CK G 
Sbjct: 142 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 201

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V    +  G++++   + N  T+N  I+GL    R+ EA  L   ++A+   P+V+TYNT
Sbjct: 202 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNT 260

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI GLC+      A++    M N        C P+  TY+TIIDG CK   V +A  L  
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQG------CLPDDFTYNTIIDGYCKISMVQEATELLK 314

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
               +   PD VTY SLI+GLC   D   A  LF E   +G++P +V +N ++  LC   
Sbjct: 315 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 374

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +  A ++++ M + G  P+  TYN +++G C MG I+ A  +       G   D  ++N
Sbjct: 375 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+GYCK  +++ AL L   M   GI P  +TYN++  GL +  +V    + F EM   
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  TY   I+  C++  + EA ++   +       D  ++N LI G C++G L+ A
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           + LF  L          T+N +I        M  A  +F +M       D  T+ +LI G
Sbjct: 555 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
             +     +    L +M +K  +P  S    V++ L  N    +++    +  + G V E
Sbjct: 615 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 674



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 251/517 (48%), Gaps = 49/517 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +FD ML  H  P  +++FN +L +L K            ++   G+  NL+TYNI
Sbjct: 168 HDARQLFDQMLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I   C+ GR+    +     +R+   P+  T+N+LI+GL  +S   EA     ++   G
Sbjct: 227 WIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 162 CEPNVITYNT-----------------------------------LINGLCRTGHTMIAL 186
           C P+  TYNT                                   LINGLC  G    AL
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            LF E A   G      KP+ V Y++++ GLC +G +  A  +  +M +E  +PD+ TYN
Sbjct: 346 ELFNE-AQAKG-----IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            +I+GLC   + ++A  +  + + +G  P V TFN ++D  CK  K+D A +L++ M + 
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P+  TYN++++G C  GK+N   E F  M   GC  + ++YNILI  +C++ ++EEA
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             +  +M  +G+ P  V++NTL  G      +E A  LF +++  G +A   T+ T I  
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 579

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
                 +  A ++F  +       D   Y  LIDG CK+  +  A+     +     +P+
Sbjct: 580 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 639

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           + T+  +I  L  + ++ +A  +   M +    P+V+
Sbjct: 640 MSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 218/453 (48%), Gaps = 47/453 (10%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L K        HY  R+   G  P+ +TYN +I+ +CKI  V      
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               +   F P+  T+ SLI GL AE  +  A  LF + +A G +P+++ YN+L+ GLC 
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372

Query: 179 TGHTMIALNLFEEMANG---------NGEIGVVCK--------------------PNTVT 209
            G  + AL +  EMA           N  I  +CK                    P+  T
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++T+IDG CK   +D A  L  +M +  I PD +TYNS+++GLC A   NE    F EM+
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P+ +T+N++++  C++ KM+EAS+++  M Q G+ P+A ++NTL+ GFC  G + 
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  +E  G      ++N LI  +     +  A  ++ EM+SKG +    TY  L 
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL------ 443
            G  +   V+ A     EM + G      T+   I+ L  N  + +AV +   +      
Sbjct: 613 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 672

Query: 444 -----RILKCE-LDIQAYNCLIDGLCKSGRLKF 470
                 IL  +  +I A   L++ L K G + +
Sbjct: 673 PEVVDTILNADKKEIAAPKILVEDLMKKGHISY 705



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 198/432 (45%), Gaps = 38/432 (8%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           Y   I    R G    A++ FE M          C P    Y+ I+D L    + D+A  
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMD------LFACPPAAPAYNAIMDALVDAAYHDQAHK 106

Query: 229 LFLQMKDENINPDV-------------------------------VTYNSLIHGLCHAND 257
           ++++M    ++PD+                               V Y +++ GL     
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 166

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
            ++A++LF +M+   V P++  FN ++  LCK   + EA  LL  ++QRG+  N  TYN 
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
            + G C  G++  A  L   M +     D V+YN LI G CK    +EA+   R M+++G
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P   TYNT+  G  +I  V+ A +L  +    G   D  TY + I+GLC  G +  A+
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           ELF   +    + DI  YN L+ GLC  G +  A ++   +      P++ TYNI+I GL
Sbjct: 346 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G +  A  +  D       PDV TF+ LI G+ +  +     +L+ +M E  + PD 
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 465

Query: 558 SIVSIVVDLLVK 569
              + V++ L K
Sbjct: 466 ITYNSVLNGLCK 477



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 147/333 (44%), Gaps = 5/333 (1%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y + I     A    +A   F  M      P+   +N IMD L      D+A ++   M+
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             GV P+  T+   +  FCL  + + A  L  ++   G     V+Y  ++ G   +    
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 168

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L+ +M+   + P +  +N +   L +   V  A  L  ++ + G++ +  TY  +I
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GLC+ G + EAV L   +R      D+  YN LI GLCK    + A      + +   +
Sbjct: 229 RGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+  TYN +I G C    + +A +L  D       PD +T+  LI+G     +  +  EL
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            ++ + K + PD  + + +V  L    + L +L
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 247/494 (50%), Gaps = 17/494 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   ++N ++ +L    ++D       R+ A G+ P+L+T+ I +  FC   R  +   
Sbjct: 85  PPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIAL- 143

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              R+LR+     A  + +++ GL+A     +A  LF ++      PN+  +N +++ LC
Sbjct: 144 ---RLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALC 200

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G  + A  L  ++      I      N  TY+  I GLC+ G + +A  L   M+   
Sbjct: 201 KRGDVLEAGLLLGKVIQRGMSI------NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 254

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PDVVTYN+LI GLC  +   EA      MM+QG  P   T+N I+D  CK   + EA+
Sbjct: 255 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 313

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL   V +G  P+  TY +L++G C  G + RA ELF   ++ G K D V YN L+ G 
Sbjct: 314 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 373

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    +  AL +  EM  +G  P + TYN +  GL ++  +  A  + ++    G   D 
Sbjct: 374 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 433

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+ T IDG CK   +  A++L   +       D   YN +++GLCK+G++    E F  
Sbjct: 434 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 493

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      PN +TYNI+I+  C   +M++A  + + M +    PD ++F+ LI+GF R  +
Sbjct: 494 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGD 553

Query: 538 PSKVNELLHKMKEK 551
                 L  K++EK
Sbjct: 554 LEGAYLLFQKLEEK 567



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/540 (29%), Positives = 255/540 (47%), Gaps = 12/540 (2%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNILINCFCKIGR 111
           +LR  P    V+   ++    A    +D R     +  T +FPNL  +N +++  CK G 
Sbjct: 145 LLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 204

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V    +  G++++   + N  T+N  I+GL    R+ EA  L   ++A+   P+V+TYNT
Sbjct: 205 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNT 263

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI GLC+      A++    M N        C P+  TY+TIIDG CK   V +A  L  
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQG------CLPDDFTYNTIIDGYCKISMVQEATELLK 317

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
               +   PD VTY SLI+GLC   D   A  LF E   +G++P +V +N ++  LC   
Sbjct: 318 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 377

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +  A ++++ M + G  P+  TYN +++G C MG I+ A  +       G   D  ++N
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+GYCK  +++ AL L   M   GI P  +TYN++  GL +  +V    + F EM   
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  TY   I+  C++  + EA ++   +       D  ++N LI G C++G L+ A
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           + LF  L          T+N +I        M  A  +F +M       D  T+ +LI G
Sbjct: 558 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
             +     +    L +M +K  +P  S    V++ L  N    +++    +  + G V E
Sbjct: 618 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 677



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 251/517 (48%), Gaps = 49/517 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +FD ML  H  P  +++FN +L +L K            ++   G+  NL+TYNI
Sbjct: 171 HDARQLFDQMLHTHVFPN-LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I   C+ GR+    +     +R+   P+  T+N+LI+GL  +S   EA     ++   G
Sbjct: 230 WIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 288

Query: 162 CEPNVITYNT-----------------------------------LINGLCRTGHTMIAL 186
           C P+  TYNT                                   LINGLC  G    AL
Sbjct: 289 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 348

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            LF E A   G      KP+ V Y++++ GLC +G +  A  +  +M +E  +PD+ TYN
Sbjct: 349 ELFNE-AQAKG-----IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            +I+GLC   + ++A  +  + + +G  P V TFN ++D  CK  K+D A +L++ M + 
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P+  TYN++++G C  GK+N   E F  M   GC  + ++YNILI  +C++ ++EEA
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             +  +M  +G+ P  V++NTL  G      +E A  LF +++  G +A   T+ T I  
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
                 +  A ++F  +       D   Y  LIDG CK+  +  A+     +     +P+
Sbjct: 583 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 642

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           + T+  +I  L  + ++ +A  +   M +    P+V+
Sbjct: 643 MSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 232/495 (46%), Gaps = 64/495 (12%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L K        HY  R+   G  P+ +TYN +I+ +CKI  V      
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               +   F P+  T+ SLI GL AE  +  A  LF + +A G +P+++ YN+L+ GLC 
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375

Query: 179 TGHTMIALNLFEEMANG---------NGEIGVVCK--------------------PNTVT 209
            G  + AL +  EMA           N  I  +CK                    P+  T
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++T+IDG CK   +D A  L  +M +  I PD +TYNS+++GLC A   NE    F EM+
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P+ +T+N++++  C++ KM+EAS+++  M Q G+ P+A ++NTL+ GFC  G + 
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  +E  G      ++N LI  +     +  A  ++ EM+SKG +    TY  L 
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL------ 443
            G  +   V+ A     EM + G      T+   I+ L  N  + +AV +   +      
Sbjct: 616 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 675

Query: 444 -----RILKCE-LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
                 IL  +  +I A   L++ L K G + +                  TY ++ +G+
Sbjct: 676 PEVVDTILNADKKEIAAPKILVEDLMKKGHISYP-----------------TYEVLHEGV 718

Query: 498 CNDGQMDKARDLFLD 512
            ++    K R L L+
Sbjct: 719 RDNKLTRKHRMLLLN 733



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 198/432 (45%), Gaps = 38/432 (8%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           Y   I    R G    A++ FE M          C P    Y+ I+D L    + D+A  
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDL------FACPPAAPAYNAIMDALVDAAYHDQAHK 109

Query: 229 LFLQMKDENINPDV-------------------------------VTYNSLIHGLCHAND 257
           ++++M    ++PD+                               V Y +++ GL     
Sbjct: 110 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 169

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
            ++A++LF +M+   V P++  FN ++  LCK   + EA  LL  ++QRG+  N  TYN 
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
            + G C  G++  A  L   M +     D V+YN LI G CK    +EA+   R M+++G
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 288

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P   TYNT+  G  +I  V+ A +L  +    G   D  TY + I+GLC  G +  A+
Sbjct: 289 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 348

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           ELF   +    + DI  YN L+ GLC  G +  A ++   +      P++ TYNI+I GL
Sbjct: 349 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G +  A  +  D       PDV TF+ LI G+ +  +     +L+ +M E  + PD 
Sbjct: 409 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 468

Query: 558 SIVSIVVDLLVK 569
              + V++ L K
Sbjct: 469 ITYNSVLNGLCK 480



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 147/333 (44%), Gaps = 5/333 (1%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y + I     A    +A   F  M      P+   +N IMD L      D+A ++   M+
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             GV P+  T+   +  FCL  + + A  L  ++   G     V+Y  ++ G   +    
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 171

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L+ +M+   + P +  +N +   L +   V  A  L  ++ + G++ +  TY  +I
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GLC+ G + EAV L   +R      D+  YN LI GLCK    + A      + +   +
Sbjct: 232 RGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+  TYN +I G C    + +A +L  D       PD +T+  LI+G     +  +  EL
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            ++ + K + PD  + + +V  L    + L +L
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 232/441 (52%), Gaps = 14/441 (3%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++L+  + K   +   + AF R     F  +  + N L+  L  E++I +   ++ ++  
Sbjct: 134 DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK 193

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
                N+ T+N  INGLCR G    A +  E+M       G+   PN VTY+T++DG CK
Sbjct: 194 RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMK----AWGI--SPNVVTYNTLVDGYCK 247

Query: 220 EGFVD---KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
            G      KA+A   +M    I P+ VT+N+LI G C   +   AK+ F EM  QG++P+
Sbjct: 248 RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           +VT+N +++ LC N K++EA  L D MV  G++PN  TYN L++GFC    +  A ++F 
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD 367

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            +       + +++N +I+ YCK   +EE  SL   M+ +GI P V TYN L  GL    
Sbjct: 368 DVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQ 427

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            ++ A +L +EM+  G+  D  TY   IDGLCKN     A +L   +  L  + +   YN
Sbjct: 428 DLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYN 487

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+DG C  G+LK A  +   +      PNVVTYN++I+G C   +++ A  L  +M E 
Sbjct: 488 TLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 547

Query: 517 AAAP-----DVITFDMLIHGF 532
              P     D++  +ML  GF
Sbjct: 548 GLNPNRTTYDIVRLEMLEKGF 568



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/417 (32%), Positives = 230/417 (55%), Gaps = 9/417 (2%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A   FT+ K +G + ++ + N L++ L +         +++EM      I      N  T
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEM------IKRRIHTNLNT 202

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH---ANDWNEAKRLFI 266
           ++  I+GLC+ G ++KA+     MK   I+P+VVTYN+L+ G C    A    +A+    
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+   + P+ VTFN ++D  CK+  +  A +  + M ++G++PN  TYN+L++G C  G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K+  A +L+  M  +G K + V+YN LING+CK K ++EA  ++ ++  + + P V+T+N
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+     +   +E    L   M  +G+  +  TY   I GLC+   +  A EL   +   
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + D+  YN LIDGLCK+ + + A +L   + +  L PN VTYN ++ G C +G++  A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            ++   ME+    P+V+T+++LI G+ +IN+    N LL++M EK + P+ +   IV
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 191/339 (56%), Gaps = 15/339 (4%)

Query: 65  PPVSSFNILL---------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P V ++N L+           + K + +   + A  + PN  T+N LI+ FCK   V+  
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAA 292

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
             AF  + +    PN  T+NSLI GL    ++ EA  L+ K+   G +PN++TYN LING
Sbjct: 293 KKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C+      A  +F++++           PN +T++T+ID  CKEG +++  +L   M D
Sbjct: 353 FCKKKMMKEATKVFDDVSKQE------LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLD 406

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           E I P+V TYN LI GLC   D   AK L  EM ++G++  VVT+N+++D LCKN K   
Sbjct: 407 EGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRN 466

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A +LL+ M   G++PN  TYNTLMDG+C+ GK+  A  +   ME    + + V+YN+LI 
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIK 526

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           GYCK  ++E A  L  EM+ KG+ P   TY+ + L + E
Sbjct: 527 GYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLE 565



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 225/413 (54%), Gaps = 11/413 (2%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           TR    G   +L + N L++   K  ++      +  +++     N  TFN  I GL   
Sbjct: 154 TRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRA 213

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT--MIALNLF--EEMANGNGEIG 200
            ++ +A      +KA+G  PNV+TYNTL++G C+ G    M     F  E +AN      
Sbjct: 214 GKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK----- 268

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
            +C PN VT++T+IDG CK+  V  AK  F +M+ + + P++VTYNSLI+GLC+     E
Sbjct: 269 -IC-PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEE 326

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  L+ +M+  G++P++VT+N +++  CK + M EA+++ D + ++ + PN  T+NT++D
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            +C  G +     L  SM   G   +  +YN LI G C+ ++++ A  L  EM +KG+K 
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKG 446

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VVTYN L  GL +  +  +A KL +EM   G+  +  TY T +DG C  G +  A+ + 
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             +   + + ++  YN LI G CK  +L+ A  L   +    L PN  TY+I+
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 174/316 (55%), Gaps = 3/316 (0%)

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A   F    D G + S+ + N ++  L K  K+ +   +   M++R +  N  T+N  ++
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK---EVEEALSLYREMVSKG 377
           G C  GK+N+AE+    M++ G   + V+YN L++GYCK     ++ +A +  +EM++  
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           I P  VT+NTL  G  +   V  A K F+EMQ+ G+  +  TY + I+GLC NG + EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           +L+  +  L  + +I  YN LI+G CK   +K A ++F  +    LVPNV+T+N MI   
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C +G M++   L   M +    P+V T++ LI G  R  +     ELL++M+ K +  D 
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 558 SIVSIVVDLLVKNEIS 573
              +I++D L KN+ S
Sbjct: 449 VTYNILIDGLCKNDKS 464



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 186/339 (54%), Gaps = 3/339 (0%)

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           F + KD      + + N L+  L   N   + + ++ EM+ + +  ++ TFN+ ++ LC+
Sbjct: 153 FTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCR 212

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL---MGKINRAEELFGSMESMGCKHD 346
             K+++A   ++ M   G+ PN  TYNTL+DG+C     GK+ +AE     M +     +
Sbjct: 213 AGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPN 272

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           +V++N LI+G+CK++ V  A   + EM  +G+KP +VTYN+L  GL    ++E A+ L+D
Sbjct: 273 EVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD 332

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   G+  +  TY   I+G CK   + EA ++F  +   +   ++  +N +ID  CK G
Sbjct: 333 KMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEG 392

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            ++  + L  S+    ++PNV TYN +I GLC    +  A++L  +ME      DV+T++
Sbjct: 393 MMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYN 452

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +LI G  + ++     +LL++M    + P+    + ++D
Sbjct: 453 ILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMD 491



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 99/201 (49%), Gaps = 3/201 (1%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           ++L+  Y KN E+  A   +      G K ++ + N L   L + +++     ++ EM +
Sbjct: 134 DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK 193

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK---SGR 467
             +  +  T+  FI+GLC+ G + +A +    ++      ++  YN L+DG CK   +G+
Sbjct: 194 RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGK 253

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A      +    + PN VT+N +I G C D  +  A+  F +M++    P+++T++ 
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313

Query: 528 LIHGFIRINEPSKVNELLHKM 548
           LI+G     +  +  +L  KM
Sbjct: 314 LINGLCNNGKLEEAIDLWDKM 334



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 3/155 (1%)

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A E F   +    +L + + N L+  L K  ++     ++  +    +  N+ T+NI I 
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE---KK 552
           GLC  G+++KA D   DM+    +P+V+T++ L+ G+ +     K+ +    MKE    K
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           + P+    + ++D   K+E    +  +F   ++QG
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG 303


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 260/542 (47%), Gaps = 49/542 (9%)

Query: 71  NILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           N L+A L ++++++       ++  T  F N  + + L+ C+ ++ +    F     +L+
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
             F  N    N L+KGL       +A +L  +++     P+V +YNT+I G C       
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL L  EM  G+G     C  + VT+  +ID  CK G +D+A     +MK   +  D+V 
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y SLI G C   + +  K LF E++++G  P  +T+N ++   CK  ++ EAS + + M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RGVRPN  TY  L+DG C +GK   A +L   M     + + V+YNI+IN  CK+  V 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTT 422
           +A+ +   M  +  +P  +TYN L  GL     ++ A KL   M +D      D  +Y  
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 423 FIDGLCKN-----------------------------------GYIIEAVELFRTLRILK 447
            I GLCK                                    G + +A+EL++ +   K
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   Y  +IDG CK+G L  A  L C +    L P+V  YN ++  LC +G +D+A 
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF +M+ +   PDV++F+++I G ++  +      LL  M    + PD    S +++  
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609

Query: 568 VK 569
           +K
Sbjct: 610 LK 611



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 259/526 (49%), Gaps = 21/526 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH--------YDTRLNATGLFPNLYTYNI 101
           AF +   ML+       V + NILL  L +N           + R N+  L P++++YN 
Sbjct: 126 AFGVLALMLK-RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS--LMPDVFSYNT 182

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I  FC+   +         +  S  + +  T+  LI       ++ EA     ++K  G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            E +++ Y +LI G C  G       LF+E +  G+        P  +TY+T+I G CK 
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKL 295

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G + +A  +F  M +  + P+V TY  LI GLC      EA +L   M+++  +P+ VT+
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
           N+I+++LCK+  + +A  +++LM +R  RP+  TYN L+ G C  G ++ A +L   M  
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S     D +SYN LI+G CK   + +AL +Y  +V K      VT N L     +   V
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A++L+ ++    +  ++ TYT  IDG CK G +  A  L   +R+ + +  +  YNCL
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +  LCK G L  AW LF  +      P+VV++NIMI G    G +  A  L + M     
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +PD+ T+  LI+ F+++    +      KM +    PDA I   V+
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 227/479 (47%), Gaps = 43/479 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  +L  Y  LI  FC  G +  G   F  +L    +P A T+N+LI+G     ++ EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           + +F  +   G  PNV TY  LI+GLC  G T  AL L   M   + E      PN VTY
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE------PNAVTY 355

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + II+ LCK+G V  A  +   MK     PD +TYN L+ GLC   D +EA +L   M+ 
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 271 QG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                 P V+++N ++  LCK  ++ +A  + DL+V++    +  T N L++     G +
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           N+A EL+  +       +  +Y  +I+G+CK   +  A  L  +M    ++P+V  YN L
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +   ++ A +LF+EMQRD    D  ++   IDG  K G                 
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG----------------- 578

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             DI++   L+ G+ ++G                L P++ TY+ +I      G +D+A  
Sbjct: 579 --DIKSAESLLVGMSRAG----------------LSPDLFTYSKLINRFLKLGYLDEAIS 620

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            F  M ++   PD    D ++   I   E  K+ EL+ K+ +K ++ D  +   V+D +
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 11/419 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           +FD +L    SP  ++ +N L      L  L +       +   G+ PN+YTY  LI+  
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C +G+          ++     PNA T+N +I  L  +  + +A  +   +K     P+ 
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           ITYN L+ GLC  G    A  L   M   +        P+ ++Y+ +I GLCKE  + +A
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQA 443

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             ++  + ++    D VT N L++    A D N+A  L+ ++ D  +  +  T+  ++D 
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK   ++ A  LL  M    ++P+   YN L+   C  G +++A  LF  M+      D
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            VS+NI+I+G  K  +++ A SL   M   G+ P + TY+ L     ++  ++ A+  FD
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           +M   G   D     + +      G   +  EL + L      LD +    ++D +C S
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/480 (31%), Positives = 247/480 (51%), Gaps = 23/480 (4%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+L+    K GR  L +  +  ++ +  +P+  TF +LI G   +  ++ A  +F +++ 
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  P VI Y  LI GLC       A    E M     E+GV   PN  TY+T++DG CK
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEA----ESMHRAMREVGVY--PNVYTYNTLMDGYCK 264

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
                +A  L+  M  E + PDVVT+  LI GLC   +   A+ LF+ M+   V P++  
Sbjct: 265 LANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N ++D  CK   + EA  L   + +  V P+  TY+ L+ G C + +   A  +F  M 
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT 384

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G   + V+YN LI+G CK  ++++AL +  +M   G++P V+T++TL  G  +I  ++
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQ 444

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+ ++ EM    ++ D  TYT  IDG CK G + EA++L+  +       +    +CL+
Sbjct: 445 AAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLL 504

Query: 460 DGLCKSGRLKFAWELF----------CSLPHGVLVP---NVVTYNIMIQGLCNDGQMDKA 506
           DGLCK G++  A ELF          C++  G   P   N V Y  +I GLC DGQ  KA
Sbjct: 505 DGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKA 564

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK-MKEKKVMPDASIVSIVVD 565
             LF DM      PD + + +++ G  ++     +  +LH  M +  V+P++++  I+ +
Sbjct: 565 VKLFSDMRRYGLQPDEVIYVVMLRGLFQVK---YILMMLHADMLKFGVIPNSAVHVILCE 621



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 152/502 (30%), Positives = 257/502 (51%), Gaps = 58/502 (11%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + + N+LL  L K   ++        + + GL P++ T+  LI+  C+ G +      F 
Sbjct: 147 IQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFD 206

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P    +  LI+GL ++++I EA ++   ++  G  PNV TYNTL++G C+  
Sbjct: 207 EMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLA 266

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +   AL L+++M  G G +     P+ VT+  +IDGLCK G +  A+ LF+ M   ++ P
Sbjct: 267 NAKQALRLYQDML-GEGLV-----PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTP 320

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++  YNSLI   C   D +EA  LF+E+    V P V T+++++  LC   + +EA  + 
Sbjct: 321 NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M + G+  N+ TYN+L+DG C  GK+++A E+   M   G + + ++++ LI+GYCK 
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + ++ A+ +Y EMV K + P VVTY  +  G  +   ++ ALKL+ +M  +G+  +  T 
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500

Query: 421 TTFIDGLCKNGYIIEAVELFRT---LRILKCELDIQ----------AYNCLIDGLCKSGR 467
           +  +DGLCK+G I +A+ELF      +  +C +D            AY  LI GLC+ G+
Sbjct: 501 SCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQ 560

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN---------------------------- 499
              A +LF  +    L P+ V Y +M++GL                              
Sbjct: 561 FSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLHADMLKFGVIPNSAVHVILC 620

Query: 500 -----DGQMDKARDLFLDMEEN 516
                 G +  A++   D+EEN
Sbjct: 621 ECYQESGFLKSAQNCSKDLEEN 642



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 259/493 (52%), Gaps = 24/493 (4%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +RL ++   PN+Y   I++   CK+  V      + ++  +  T  A   N L+  L   
Sbjct: 106 SRLKSSKFTPNVYGELIIV--LCKMELVEEALSMYHKV-GAALTIQAC--NVLLYVLVKT 160

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            R      ++ ++ + G  P+VIT+ TLI+G CR G  + A  +F+EM       G+V  
Sbjct: 161 GRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK----GIV-- 214

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + Y+ +I GLC +  +++A+++   M++  + P+V TYN+L+ G C   +  +A RL
Sbjct: 215 PTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRL 274

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           + +M+ +G+ P VVTF +++D LCK  +M  A  L   M++  V PN   YN+L+D +C 
Sbjct: 275 YQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCK 334

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G ++ A  LF  +E      D  +Y+ILI G C     EEA +++ +M  +GI    VT
Sbjct: 335 VGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVT 394

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L  G  +  +++ AL++  +M  +GV  +  T++T IDG CK   +  A+ ++  + 
Sbjct: 395 YNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMV 454

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           I     D+  Y  +IDG CK G +K A +L+  +    + PN  T + ++ GLC DG++ 
Sbjct: 455 IKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKIS 514

Query: 505 KARDLFLD----------MEENAAAPDV---ITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            A +LF +          ++   + P +   + +  LIHG  +  + SK  +L   M+  
Sbjct: 515 DALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRY 574

Query: 552 KVMPDASIVSIVV 564
            + PD  I  +++
Sbjct: 575 GLQPDEVIYVVML 587



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 144/438 (32%), Positives = 229/438 (52%), Gaps = 11/438 (2%)

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
            L F    R+  S FTPN   +  LI  L     + EA +++ K+   G    +   N L
Sbjct: 99  QLAFSELSRLKSSKFTPN--VYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVL 153

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           +  L +TG   +   ++EEM + NG       P+ +T+ T+IDG C++G + +A+ +F +
Sbjct: 154 LYVLVKTGRFELLWRIYEEMIS-NG-----LSPSVITFGTLIDGCCRQGDLLRAQEMFDE 207

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+ + I P V+ Y  LI GLC  N   EA+ +   M + GV P+V T+N +MD  CK   
Sbjct: 208 MRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLAN 267

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             +A RL   M+  G+ P+  T+  L+DG C  G++  A  LF +M       +   YN 
Sbjct: 268 AKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNS 327

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+ YCK  +V EA++L+ E+    + P V TY+ L  GL  + + E A  +F++M ++G
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           + A++ TY + IDG CK G + +A+E+   +     E ++  ++ LIDG CK   L+ A 
Sbjct: 388 ILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAM 447

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            ++  +    L P+VVTY  MI G C  G M +A  L+ DM +N   P+  T   L+ G 
Sbjct: 448 GIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGL 507

Query: 533 IRINEPSKVNELLHKMKE 550
            +  + S   EL  +  E
Sbjct: 508 CKDGKISDALELFTEKIE 525



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 219/441 (49%), Gaps = 15/441 (3%)

Query: 134 FNSLIKGLHAESRIMEAAAL----FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
            N L++ L    +   A  L     ++LK+    PNV  Y  LI  LC+      AL+++
Sbjct: 81  LNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMY 138

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
            ++    G    +   N + Y      L K G  +    ++ +M    ++P V+T+ +LI
Sbjct: 139 HKV----GAALTIQACNVLLYV-----LVKTGRFELLWRIYEEMISNGLSPSVITFGTLI 189

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C   D   A+ +F EM  +G+ P+V+ + +++  LC + K++EA  +   M + GV 
Sbjct: 190 DGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVY 249

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TYNTLMDG+C +    +A  L+  M   G   D V++ ILI+G CK  E++ A +L
Sbjct: 250 PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL 309

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  M+   + P +  YN+L     ++  V  A+ LF E++R  V+ D  TY+  I GLC 
Sbjct: 310 FVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
                EA  +F  +       +   YN LIDG CK G++  A E+   +    + PNV+T
Sbjct: 370 VSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVIT 429

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           ++ +I G C    +  A  ++ +M   + +PDV+T+  +I G  +     +  +L   M 
Sbjct: 430 FSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDML 489

Query: 550 EKKVMPDASIVSIVVDLLVKN 570
           +  + P+   +S ++D L K+
Sbjct: 490 DNGITPNCYTISCLLDGLCKD 510



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 16/320 (5%)

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +E  +   + ++  ++ I+  L  ++ +  A  LL+ +VQ  V+ +   Y+     F  +
Sbjct: 47  LEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHK-PYHACQLAFSEL 105

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            ++  +            K     Y  LI   CK + VEEALS+Y ++   G   T+   
Sbjct: 106 SRLKSS------------KFTPNVYGELIIVLCKMELVEEALSMYHKV---GAALTIQAC 150

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L   L +  + E   ++++EM  +G++    T+ T IDG C+ G ++ A E+F  +R+
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                 +  Y  LI GLC   +++ A  +  ++    + PNV TYN ++ G C      +
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  L+ DM      PDV+TF +LI G  +  E      L   M +  V P+ ++ + ++D
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330

Query: 566 LLVKNEISLKSLPSFLVQER 585
              K     +++  FL  ER
Sbjct: 331 AYCKVGDVSEAMALFLELER 350


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/518 (29%), Positives = 261/518 (50%), Gaps = 24/518 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNIL 102
           +A  + D M R   +P P   +++ L +  +   +         L+  G   ++   N++
Sbjct: 129 DALAVLDDMARRGCAPTP-PMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLV 187

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFT-----PNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +   C  G V        R+LR         P+  ++N++++GL    R      L  ++
Sbjct: 188 LQAVCDQGPVDEAV----RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEM 243

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV-VCKPNTVTYSTIIDG 216
            A GC PN++T++TLI  LCR G       LFE +   + ++    C P+   Y+TIIDG
Sbjct: 244 VAAGCPPNIVTFSTLIGHLCRNG-------LFERVHEVHAQMAEHGCAPDVRMYATIIDG 296

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           +CKE  ++ A+ +  +M    ++P+VV YN+L+ GLC A+ W EA+ L  EM D+     
Sbjct: 297 VCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLD 356

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            VTFN+++D LC+N  +D    +L+ M++ G  P+  TY T+++GFC  G I+ A  L  
Sbjct: 357 DVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLR 416

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           SM + GC+ + VSY I++ G C  +   +A  L  +M+ +G  P  VT+NTL   L +  
Sbjct: 417 SMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 476

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            VE A++L  +M  +G + D  +Y+T IDGL K G   EA+EL   +       +   Y+
Sbjct: 477 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYS 536

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +   L   GR+    ++F ++    +  + V YN +I  LC  G+ D+A +    M  +
Sbjct: 537 SIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSS 596

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              P+  T+ +LI G        +  E+L ++  K  +
Sbjct: 597 GCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 225/470 (47%), Gaps = 10/470 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           YN ++  +C+ G+++        +      PNA T+  L++ L A  RI +A A+   + 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P    Y+  +   CR      A+ +  ++ +G G     C  +    + ++  +C
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDL-HGRG-----CALDVGNCNLVLQAVC 192

Query: 219 KEGFVDKAKALFLQMKDE-NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            +G VD+A  L   +       PDVV+YN+++ GLC A  W   + L  EM+  G  P++
Sbjct: 193 DQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNI 252

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VTF+ ++  LC+N   +    +   M + G  P+   Y T++DG C   ++  A  +   
Sbjct: 253 VTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNR 312

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M S G   + V YN L+ G C     EEA  L  EM  K      VT+N L   L +   
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V+  +++ ++M   G   D  TYTT I+G CK G I EAV L R++    C  +  +Y  
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++ GLC + R   A EL   +      PN VT+N +I  LC  G +++A +L   M  N 
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +PD+I++  +I G  +     +  ELL+ M +K + P+  I S +   L
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 225/506 (44%), Gaps = 40/506 (7%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN YTY  L+   C  GR++        + R    P    ++  ++     S    A  +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              L   GC  +V   N ++  +C  G    A+ L  ++    G     C+P+ V+Y+ +
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFG-----CEPDVVSYNAV 223

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC        + L  +M      P++VT+++LI  LC    +     +  +M + G 
Sbjct: 224 LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGC 283

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P V  +  I+D +CK  +++ A  +L+ M   G+ PN   YNTL+ G C   +   AE 
Sbjct: 284 APDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEG 343

Query: 334 LFGSMESMGCKHDDVSYNIL-----------------------------------INGYC 358
           L   M    C  DDV++NIL                                   ING+C
Sbjct: 344 LLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFC 403

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   ++EA+ L R M + G +P  V+Y  +  GL    +   A +L  +M + G   +  
Sbjct: 404 KEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPV 463

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G    A EL   +
Sbjct: 464 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I    +  E 
Sbjct: 524 VKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGET 583

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVV 564
            +  E L  M     +P+ S  +I++
Sbjct: 584 DRAIEFLAYMVSSGCVPNESTYTILI 609



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 4/223 (1%)

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN ++ GYC+  ++  A        S  + P   TY  L   L    ++  AL + D+M 
Sbjct: 82  YNAMVAGYCRAGQLAAARR---LAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R G A     Y   ++  C+      AV + R L    C LD+   N ++  +C  G + 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 470 FAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            A  L    LP     P+VV+YN +++GLC   +    +DL  +M      P+++TF  L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           I    R     +V+E+  +M E    PD  + + ++D + K E
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEE 301


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 271/528 (51%), Gaps = 21/528 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN+L+  L  +   D       ++   G  PN Y++ IL+  +C+ G  S G   
Sbjct: 54  PETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLEL 113

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G + R  F+PN   +N+LI     E +  +A  L  +++  G  P+V+T+N  I+ LC 
Sbjct: 114 LGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCS 173

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G  + A  +F +M     E+  + +PN +TY+ ++ G CKEG +++A+ALF +MK    
Sbjct: 174 SGKVLEASRIFRDMQ--IDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             +  +YN  + GL       EA+ +  EM+D G++P+V ++N++MD LCKN  + +A  
Sbjct: 232 LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARM 291

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+ LM   GV P+  TY TL+ G+C  GK++ A  +   M   GC  ++ + NIL+    
Sbjct: 292 LMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLW 351

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   + EA  L ++M  KG     VT N +  GL    +++ A+++ + M   G AA   
Sbjct: 352 KEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGN 411

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
              ++I GL  +           +    KC  D+ +Y+ +I GLCK+GR+  A + F  +
Sbjct: 412 LGNSYI-GLVDD-----------SDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEM 459

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L P+   Y++ I   C +G++  A  +  DME+      + T++ LI G    N+ 
Sbjct: 460 MGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQI 519

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
            ++  L+ +M+E+ V PD SI + V+  L +    +K  PS L +  Q
Sbjct: 520 FEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGG-RVKDAPSVLDEMLQ 566



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 242/540 (44%), Gaps = 63/540 (11%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN   YN LI+ FCK G+          + +   +P+  TFN+ I  L +  +++EA
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA 180

Query: 151 AALFTKLK---AFGC-EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG--------- 197
           + +F  ++     G  +PN+ITYN ++ G C+ G    A  LFE+M              
Sbjct: 181 SRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNI 240

Query: 198 ------------EIGVVCK--------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                       E  +V K        PN  +Y+ ++DGLCK G +  A+ L   M    
Sbjct: 241 WLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSG 300

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PD VTY +L+HG CH    +EA  +  EMM  G  P+  T N+++  L K  ++ EA 
Sbjct: 301 VLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAE 360

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--------------- 342
            LL  M ++G   +  T N ++DG C  GK+++A E+   M + G               
Sbjct: 361 ELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLV 420

Query: 343 --------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
                   C  D +SY+ +I+G CK   V EA   + EM+ K ++P    Y+       +
Sbjct: 421 DDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCK 480

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++  A ++  +M++ G     +TY + I GL     I E   L   +R      D+  
Sbjct: 481 EGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSI 540

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF---L 511
           YN ++  LC+ GR+K A  +   +    + PN+ +++I+I+  C         ++F   L
Sbjct: 541 YNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIAL 600

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++  +  A   +TF+ L+ G     E  K  EL     ++       +   ++D L K+E
Sbjct: 601 NVCGHKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDE 656



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 201/436 (46%), Gaps = 30/436 (6%)

Query: 65  PPVSSFNILLASLAKNK-HYDTRL-----NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+NI++  L KN   +D R+      ++G+ P+  TY  L++ +C  G+VS     
Sbjct: 268 PNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNV 327

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++R   +PN  T N L+  L  E RI EA  L  K+   G   + +T N +I+GLC 
Sbjct: 328 LREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCN 387

Query: 179 TGHTMIALNLFEEMAN---------GNGEIGVV--------CKPNTVTYSTIIDGLCKEG 221
            G    A+ +   M           GN  IG+V        C P+ ++YSTII GLCK G
Sbjct: 388 NGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAG 447

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +AK  F++M  +N+ PD   Y+  IH  C     + A R+  +M  +G   ++ T+N
Sbjct: 448 RVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYN 507

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  L    ++ E   L+D M +RGV P+   YN ++   C  G++  A  +   M   
Sbjct: 508 SLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQK 567

Query: 342 GCKHDDVSYNILINGYCKN---KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           G   +  S++ILI  +CK      V+E   +   +         +T+N L +G     +V
Sbjct: 568 GISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVG----GEV 623

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A +LF+             Y   ID LCK+  + +A  +   L       D  ++  +
Sbjct: 624 VKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPV 683

Query: 459 IDGLCKSGRLKFAWEL 474
           IDGL K G    A EL
Sbjct: 684 IDGLGKRGNKHEADEL 699



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 39/334 (11%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           PS+  +NV++    K  ++D  S L   MV  GV P   T+N L+   C  G ++ A EL
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   GC+ ++ S+ IL+ GYC+     + L L  EM   G  P  V YNTL     +
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC----EL 450
             + + A KL DEM++DG++ D  T+   I  LC +G ++EA  +FR ++I +     + 
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELF-------------------------CSLPHGVLV- 484
           +I  YN ++ G CK G L+ A  LF                           L    LV 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 485 ---------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
                    PNV +YNI++ GLC +G +  AR L   M  +   PD +T+  L+HG+   
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            + S+ N +L +M      P+    +I++  L K
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWK 352



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 133/311 (42%), Gaps = 46/311 (14%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+L +Y+ +I+  CK GRV      F  ++     P++A ++  I     E +I  A  
Sbjct: 430 MPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +   ++  GC   + TYN+LI GL           L +EM     E GV   P+   Y+ 
Sbjct: 490 VLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR----ERGV--SPDVSIYNN 543

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN------------- 259
           ++  LC+ G V  A ++  +M  + I+P++ +++ LI   C A D++             
Sbjct: 544 VLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVC 603

Query: 260 ---------------------EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
                                +AK LF   +D+        +  ++D LCK+ K+D+AS 
Sbjct: 604 GHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASG 663

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  ++ +G   +  ++  ++DG    G  + A+EL   M  M      V   +  N  C
Sbjct: 664 ILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMA-SEGKVKNKVHQNASC 722

Query: 359 -----KNKEVE 364
                KNK+ E
Sbjct: 723 SIQGKKNKDGE 733


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 165/533 (30%), Positives = 260/533 (48%), Gaps = 17/533 (3%)

Query: 39  EGDINVITPNEAFC--IFDYMLRMHPSPPPVSSFNILLASL------AKNKHYDTRLNAT 90
            G ++V+      C  +FD M+R +   P V + N +L  L      +K K+    +   
Sbjct: 151 HGVVDVLIAGHVXCLLVFDKMIR-NGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIME 149
           G+ P + TYN +++ +CK GRV         +  R C+ PN  T+N L+ GL  +  + +
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQ 268

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  ++   G   +  TYN LING C+ G  + A +L EEM N          P   T
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRA------FPTLST 322

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ GLCK   V   +  F  M      PD+V++NSL++G C     +EA  LF E+ 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            + + P+V+T+N ++  LC    +D A RL   M  +G+ P+  TY  L++G   +G ++
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A   F  M S G K D  +YN  I G  K  +   A S+  EM++ G  P V+TYN   
Sbjct: 443 MARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFV 502

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L +    E A  L + M  DG+  D  TYT+ I+G  KNG++ +A E+F  +      
Sbjct: 503 HALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  Y  LI        L  A+  F  +    +  NV+TYN +I GLC   +MD+A   
Sbjct: 563 PSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKY 622

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           F +MEE    P+  ++ +LI+    +    +   L  +M ++K+ PD+   S+
Sbjct: 623 FDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 230/475 (48%), Gaps = 6/475 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P++   N ++        +S     +G + +    P   T+N+++     E R+ +A
Sbjct: 175 GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L ++++  GC PN +TYN L+NGL + G    A  L EEM N    +      +  TY
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV------SAYTY 288

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G C++G   +A  L  +M +    P + TYN+L++GLC        +  F +M+ 
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLK 348

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
               P +V+FN ++   C+   + EA  L D +  R + P   TYNTL+ G C+ G ++ 
Sbjct: 349 SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDA 408

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  L   M   G   D  +Y IL+NG  K   V  A   + EM+SKG+KP    YNT  +
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIV 468

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +I     A  + +EM   G   D  TY  F+  LC+ G   EA +L   +       
Sbjct: 469 GEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIP 528

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  +I+G  K+G L+ A E+F  +    + P+VVTY ++I        +D A   F
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYF 588

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             M E +   +VIT++ +I+G        +  +   +M+EK ++P+    +I+++
Sbjct: 589 SKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 199/370 (53%), Gaps = 6/370 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           FP L TYN L+   CK  +V+   + F  +L+S FTP+  +FNSL+ G      I EA  
Sbjct: 317 FPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFL 376

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           LF +LK     P VITYNTLI+GLC  G+   AL L +EM +     G+   P+  TY+ 
Sbjct: 377 LFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ----GLF--PDIFTYTI 430

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +++G  K G+V  A+  F +M  + + PD   YN+ I G     D + A  +  EM+  G
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P V+T+NV +  LC+    +EA  LL+ MV  G+ P+  TY ++++GF   G + +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E+F  M S G     V+Y +LI+ +   + ++ A   + +M+ K +   V+TYN +  GL
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               +++ A K FDEM+  G+  +  +YT  I+  C  GY  EA+ L+R +   K + D 
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670

Query: 453 QAYNCLIDGL 462
             ++  +  L
Sbjct: 671 FTHSVFLKNL 680



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 207/412 (50%), Gaps = 6/412 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F K+   G  P+V   N ++  L        A N++  M     + G+  KP  VTY+T
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMME----QFGI--KPTVVTYNT 220

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++D  CKEG VD+A  L  +M++    P+ VTYN L++GL    +  +AK L  EM++ G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           +  S  T+N +++  C+     EA  L++ MV R   P   TYNTLM G C   ++    
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
             F  M       D VS+N L+ GYC+   + EA  L+ E+  + + PTV+TYNTL  GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                ++ AL+L  EM   G+  D  TYT  ++G  K GY+  A   F  +     + D 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            AYN  I G  K      A+ +   +      P+V+TYN+ +  LC  G  ++A DL  +
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           M  +   PD +T+  +I+GF++     K  E+ ++M  K V P     ++++
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 167/342 (48%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F +M    + PDV   N ++  L   N  ++AK ++  M   G++P+VVT+N ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K  ++D+A  LL  M +RG  PN  TYN L++G    G++ +A+ L   M + G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LING+C+     EA  L  EMV++   PT+ TYNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            +     D  ++ + + G C+ G I EA  LF  L+       +  YN LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A  L   +    L P++ TY I++ G    G +  AR  F +M      PD   ++  
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           I G ++I + S    +  +M      PD    ++ V  L + 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 189/395 (47%), Gaps = 37/395 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-TRLNATGLF-----PNLYTYNIL 102
           EAF + + M+    + P +S++N L+  L K       RL  + +      P++ ++N L
Sbjct: 303 EAFDLVEEMVNRR-AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSL 361

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +  +C+ G +S  F+ F  +      P   T+N+LI GL     +  A  L  ++   G 
Sbjct: 362 LYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGL 421

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGN-------------GEIGVV------- 202
            P++ TY  L+NG  + G+  +A   F EM +               GE+ +        
Sbjct: 422 FPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFS 481

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      P+ +TY+  +  LC++G  ++A  L   M  + + PD VTY S+I+G  
Sbjct: 482 MQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFV 541

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                 +A+ +F EM+ +GV PSVVT+ V++      + +D A      M+++ V  N  
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVI 601

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYN +++G C+  +++ A + F  ME  G   +  SY ILIN  C     EEAL LYREM
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           + + I+P   T++     L   +QV HA++  + +
Sbjct: 662 LDRKIQPDSFTHSVFLKNLHRDYQV-HAVQCVESL 695



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 393 FEIHQVEHAL--------KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           FE+H V   L         +FD+M R+G+  D +     +  L     + +A  ++  + 
Sbjct: 148 FEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMME 207

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               +  +  YN ++D  CK GR+  A EL   +      PN VTYN+++ GL   G+++
Sbjct: 208 QFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELE 267

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           +A+ L  +M  +       T++ LI+GF +     +  +L+ +M  ++  P  S
Sbjct: 268 QAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 277/564 (49%), Gaps = 36/564 (6%)

Query: 28  LLVHFRDLTTREGDINVI-----TPNEAFCIFDYMLRMHPSPP------------PVSSF 70
           LLV  R L   E   N +     +P++A  + + + RM+ +               ++S+
Sbjct: 95  LLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSY 154

Query: 71  NILLASLAKNKHYDTRL---------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           N LL  L++    D  +         N   +FPNL T N ++N +CK+G +++  + F R
Sbjct: 155 NRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVR 214

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ILR    P+  T+ SL+ G      +  A  +F  +       N ++Y  LI+GLC  G 
Sbjct: 215 ILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMP----RRNAVSYTNLIHGLCEAGK 270

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL  +  M          C P   TY+ ++  LC+ G   +A +LF +M++    P+
Sbjct: 271 LHEALEFWARMREDG------CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPN 324

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V TY  LI  LC     +EA ++  EM+++GV PSVV FN ++   CK   M++A  +L 
Sbjct: 325 VYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG 384

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LM  + V PN  TYN L+ GFC    ++RA  L   M       D V+YN LI+G C+  
Sbjct: 385 LMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V+ A  L+R M+  G  P   T+N   + L  + +V  A ++ + ++   V A+   YT
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDG CK G I  A  LF+ +   +C  +   +N +IDGL K G+++ A  L   +   
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            + P + TYNI+++ +  +   D+A ++   +  +   P+V+T+   I  +       + 
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
            E++ K+K + V+ D+ I +++++
Sbjct: 625 EEMVIKIKNEGVLLDSFIYNLLIN 648



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 217/446 (48%), Gaps = 13/446 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKL---KAFGCEPNVITYNTLINGLCRTGHTM 183
           F  +  ++N L+  L   S + E  +L+ ++         PN+IT NT++N  C+ G+  
Sbjct: 147 FKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMA 206

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +A   F  +     E G    P+  TY++++ G C+   V++A  +F  M   N     V
Sbjct: 207 VARLFFVRILRC--EPG----PDLFTYTSLVLGYCRNDDVERACGVFCVMPRRN----AV 256

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +Y +LIHGLC A   +EA   +  M + G  P+V T+ V++  LC++ +  EA  L   M
Sbjct: 257 SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM 316

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +RG  PN  TY  L+D  C  G+++ A ++   M   G     V +N LI  YCK   +
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMM 376

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           E+A+ +   M SK + P V TYN L  G      ++ A+ L ++M    ++ D  TY T 
Sbjct: 377 EDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTL 436

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I GLC+ G +  A  LFR +       D   +N  +  LC+ GR+  A ++  SL    +
Sbjct: 437 IHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             N   Y  +I G C  G+++ A  LF  M      P+ ITF+++I G  +  +      
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
           L+  M +  V P     +I+V+ ++K
Sbjct: 557 LVEDMAKFDVKPTLHTYNILVEEVLK 582



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 237/512 (46%), Gaps = 20/512 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNILINCFCKIGRVSLGFIA 118
           P V  FN L+ S  K    +  +   GL       PN+ TYN LI  FC+   +      
Sbjct: 358 PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMAL 417

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             +++ S  +P+  T+N+LI GL     +  A+ LF  +   G  P+  T+N  +  LCR
Sbjct: 418 LNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR 477

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  + E +   +       K N   Y+ +IDG CK G ++ A +LF +M  E  
Sbjct: 478 MGRVGEAHQILESLKEKH------VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC 531

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ +T+N +I GL       +A  L  +M    V+P++ T+N++++E+ K    D A+ 
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANE 591

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L+ ++  G +PN  TY   +  +C  G++  AEE+   +++ G   D   YN+LIN Y 
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFDEMQRDGVAADT 417
               ++ A  + R M   G +P+ +TY+ L   L  E H+ E +  +  ++    ++ D 
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDN 711

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
               + ID      + I  V LF  +    C  ++  Y+ LI+GLCK GRL  A+ L+  
Sbjct: 712 TDIWSKID------FGITTV-LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHH 764

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +  G + P+ + +N ++   C  G   +A  L   M E +    + ++ +LI G      
Sbjct: 765 MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMN 824

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             K   +   +       D     +++D L K
Sbjct: 825 KEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAK 856



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 213/448 (47%), Gaps = 12/448 (2%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +++SC +P+ ATF      L+   R+  AAA          + ++ +YN L+  L R   
Sbjct: 112 MIKSCTSPHDATF-----LLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSM 166

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
               ++L++EM   NG       PN +T +T+++  CK G +  A+  F+++      PD
Sbjct: 167 VDEMISLYKEMLTDNGNSVF---PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPD 223

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           + TY SL+ G C  +D   A  +F  M  +    + V++  ++  LC+  K+ EA     
Sbjct: 224 LFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWA 279

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M + G  P   TY  L+   C  G+   A  LFG M   GC+ +  +Y +LI+  CK  
Sbjct: 280 RMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEG 339

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++EAL +  EMV KG+ P+VV +N L     +   +E A+ +   M+   V  + RTY 
Sbjct: 340 RMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYN 399

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             I G C+   +  A+ L   +   K   D+  YN LI GLC+ G +  A  LF  +   
Sbjct: 400 ELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRD 459

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+  T+N  +  LC  G++ +A  +   ++E     +   +  LI G+ +  +    
Sbjct: 460 GFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHA 519

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
             L  +M  ++ +P++   ++++D L K
Sbjct: 520 ASLFKRMLAEECLPNSITFNVMIDGLRK 547



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 208/503 (41%), Gaps = 76/503 (15%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+    + K  D       ++  + L P++ TYN LI+  C++G V      
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R  F+P+  TFN+ +  L    R+ EA  +   LK    + N   Y  LI+G C+
Sbjct: 453 FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCK 512

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A +LF+ M      +   C PN++T++ +IDGL KEG V  A  L   M   ++
Sbjct: 513 AGKIEHAASLFKRM------LAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P + TYN L+  +    D++ A  +   ++  G QP+VVT+   +   C   +++EA  
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626

Query: 299 L-----------------------------------LDLMVQRGVRPNACTYNTLM---- 319
           +                                   L  M   G  P+  TY+ LM    
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686

Query: 320 -----------------------DGFCLMGKINRA--EELFGSMESMGCKHDDVSYNILI 354
                                  D   +  KI+      LF  M   GC  +  +Y+ LI
Sbjct: 687 IEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLI 746

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           NG CK   +  A SLY  M   GI P+ + +N+L     ++     A+ L D M      
Sbjct: 747 NGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHL 806

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
           A   +Y   I GL +     +A  +F +L       D  A+  LIDGL K+G +    EL
Sbjct: 807 AHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSEL 866

Query: 475 FCSLPHGVLVPNVVTYNIMIQGL 497
              +       +  TY++++Q L
Sbjct: 867 LNLMEKNGCRLHPETYSMLMQEL 889



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 20/177 (11%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G  PNL TY+ LIN  CK+GR+++ F  +  +     +P+    NSL+       
Sbjct: 729 KMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLG 788

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK- 204
              EA  L   +       ++ +Y  LI GL            FE+M     E  V C  
Sbjct: 789 MFGEAVTLLDSMMECSHLAHLESYKLLICGL------------FEQMNKEKAE-AVFCSL 835

Query: 205 ------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                  + V +  +IDGL K G+VD+   L   M+         TY+ L+  L  A
Sbjct: 836 LRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 42/214 (19%)

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD---GVAADTRTYTTFIDGLCKNGYI 433
             K ++ +YN L + L     V+  + L+ EM  D    V  +  T  T ++  CK G +
Sbjct: 146 AFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM 205

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A   F  +RIL+CE                                   P++ TY  +
Sbjct: 206 AVARLFF--VRILRCEPG---------------------------------PDLFTYTSL 230

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           + G C +  +++A  +F  M    A    +++  LIHG     +  +  E   +M+E   
Sbjct: 231 VLGYCRNDDVERACGVFCVMPRRNA----VSYTNLIHGLCEAGKLHEALEFWARMREDGC 286

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            P     +++V  L ++   L++L  F     +G
Sbjct: 287 FPTVRTYTVLVCALCESGRELEALSLFGEMRERG 320


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 264/518 (50%), Gaps = 14/518 (2%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT--------GLFPNLYT 98
           P++A  IF+ M R+   P  ++   +L A +     +  RL+          G+  N  +
Sbjct: 140 PHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNS 199

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +NILI+  C   R        G++      P+  T+N+++ GL  + R+ EA  L   +K
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  PN  T+N L+ G CR G    A N+ E M+  +    VV  P+  TY+ +I G C
Sbjct: 260 NKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS----VV--PDAWTYNVMISGFC 313

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+G + +A  L  +M++  ++PDVVTYN+LI+G        E  +L  EM  +G++P+ V
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+NV++    K  KMDE  + +  M + G  P+  TYNTL+   C +GK++ A  L   M
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G K DDV+ N ++   C+ ++++EA  L      +G     V+Y TL +G F+  + 
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             AL+L+DEM+   +     TY + I GLC+ G   +A++    L       D   YN +
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G C+ G+++ A++    +      P+VVT N ++ GLC +G ++KA  LF        
Sbjct: 554 IHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGK 613

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             D ++++ +I    +     +  +LL +M+EKK+ PD
Sbjct: 614 DVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPD 651



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 160/513 (31%), Positives = 240/513 (46%), Gaps = 78/513 (15%)

Query: 58  LRMHPSPPPVSSFNILLASLAK----NKHYDTRLNAT--GLFPNLYTYNILINCFCKIGR 111
           +R +  PP   ++N +L  L K    N+  D  L+    GLFPN  T+NIL+   C++G 
Sbjct: 223 MRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGW 282

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +         + ++   P+A T+N +I G   + RI EA  L  +++     P+V+TYNT
Sbjct: 283 LKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNT 342

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LING    G +     L EEM       G   KPN+VTY+ ++    K+G +D+      
Sbjct: 343 LINGCFEHGSSEEGFKLIEEME------GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M++    PD+VTYN+LI   C     +EA RL  EM  +G++   VT N ++  LC+ R
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456

Query: 292 KMDEAS-----------------------------------RLLDLMVQRGVRPNACTYN 316
           K+DEA                                    RL D M ++ + P+  TYN
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++ G C MGK N+A +    +   G   D+++YN +I+GYC+  +VE+A   + +MV K
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
             KP VVT NTL  GL +   +E ALKLF+     G   D  +Y T I  LCK     EA
Sbjct: 577 NFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEA 636

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL------------------ 478
            +L   +   K   D   YN ++ GL  +GR+K A E    +                  
Sbjct: 637 FDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQD 696

Query: 479 ---------PHGVLVPNVVTYNIMIQGLCNDGQ 502
                    PH    PN + Y+  I  LC+ G+
Sbjct: 697 ARTSEIPQEPH----PNAIAYSNKINELCSQGR 725



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 246/485 (50%), Gaps = 11/485 (2%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL---HAESRIMEAAALFTK 156
           +I I  +   GR       F R+ R    P   T N+L+  L    +   I  + A+FT 
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
               G + N  ++N LI+G C       A+ +  +M +        C P+ +TY+TI+DG
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYG------CPPDNITYNTILDG 241

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQP 275
           LCK+G +++A+ L L MK++ + P+  T+N L+ G C      EA  + IE+M Q  V P
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANV-IELMSQNSVVP 300

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
              T+NV++   CK  ++ EA RL + M    + P+  TYNTL++G    G      +L 
Sbjct: 301 DAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLI 360

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ME  G K + V+YN+++  + K  +++E     R+M   G  P +VTYNTL     ++
Sbjct: 361 EEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKV 420

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +++ A +L DEM R G+  D  T  T +  LC+   + EA +L  + R     +D  +Y
Sbjct: 421 GKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSY 480

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LI G  K  +   A  L+  +    ++P+++TYN MI GLC  G+ ++A D   ++ E
Sbjct: 481 GTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLE 540

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
           +   PD IT++ +IHG+ +  +  K  +  +KM EK   PD    + ++  L K  +  K
Sbjct: 541 SGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEK 600

Query: 576 SLPSF 580
           +L  F
Sbjct: 601 ALKLF 605



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 13/270 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EAF + D M R       V+  N +L +L + +  D            G F +  +Y  
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVT-LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGT 482

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  + K  + S     +  +      P+  T+NS+I GL    +  +A     +L   G
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ ITYNT+I+G C+ G    A     +M   N       KP+ VT +T++ GLCKEG
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN------FKPDVVTCNTLLCGLCKEG 596

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++KA  LF     +  + D V+YN++I  LC    + EA  L  EM ++ + P   T+N
Sbjct: 597 MLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYN 656

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
            I+  L    +M +A   +  + ++G   N
Sbjct: 657 AILGGLTDAGRMKDAEEFISKIAEKGKSEN 686


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 156/496 (31%), Positives = 256/496 (51%), Gaps = 16/496 (3%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           LLA +++  H   R       PN  +Y +++   C   R          +  S    +  
Sbjct: 99  LLADMSREAHPAAR-------PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVV 151

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+ +LI+GL   + +  A  L  ++   G  PNVI Y+ L+ G CR+G       +FEEM
Sbjct: 152 TYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEM 211

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           +     +GV  +P+ + ++  ID LCK+G + KA  +   M    + P+VVTYN LI+ L
Sbjct: 212 SR----LGV--EPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCL 265

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRP 310
           C      EA  L  EM D+GV P VVT+N ++  L    +MD A  LL+ M+Q    V P
Sbjct: 266 CKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEP 325

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  T+N+++ G C +G++ +A  +   M   GC  + V+YN LI G+ +  +V  A++L 
Sbjct: 326 DVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLM 385

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            E++S G++P   TY+ L  G  ++ +V+ A      M + G+ A+   Y   +  LC+ 
Sbjct: 386 SELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQL 445

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G + +A+ LF  +  + C LD  AY+ ++ G CKSG +K A +L   +    L P+ VTY
Sbjct: 446 GMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTY 504

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           +I+I      G +++A  +   M  +   PDV  FD LI G+    + +K+ +L+H+M+ 
Sbjct: 505 SILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRA 564

Query: 551 KKVMPDASIVSIVVDL 566
           K V  D   +  +V L
Sbjct: 565 KNVAIDPKFICTLVRL 580



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 244/500 (48%), Gaps = 57/500 (11%)

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV---I 167
           R +  F+A   +LR      AA  N  ++     + + EA +L + L      P+V   +
Sbjct: 30  RPAAPFLAV--LLRRGRADAAALLNRRLRA----APVTEACSLLSAL------PDVRDAV 77

Query: 168 TYNTLINGLCRTGHTM-IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +YN ++  LCR G  +  AL+L  +M+    E     +PN V+Y+ ++ GLC     D+A
Sbjct: 78  SYNIVLAALCRRGGDLRQALSLLADMSR---EAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
            AL   M+   +  DVVTY +LI GLC A + + A  L  EM   GV P+V+ ++ ++  
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            C++ +  + S++ + M + GV P+   +   +D  C  G+I +A ++   M   G + +
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+YN+LIN  CK   V EAL+L  EM  KG+ P VVTYNTL  GL  + +++ A+ L +
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 407 EM-QRDG-VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           EM Q D  V  D  T+ + I GLCK G + +A+ +   +    C  ++  YN LI G  +
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR 374

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG---------------------------- 496
             ++  A  L   L    L P+  TY+I+I G                            
Sbjct: 375 VHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFH 434

Query: 497 -------LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
                  LC  G M++A  LF +M+ N    D + +  +++G  +  +     +LL  M 
Sbjct: 435 YIPLLAALCQLGMMEQAMVLFNEMDMNCGL-DAVAYSTMMYGACKSGDIKAAKQLLQDML 493

Query: 550 EKKVMPDASIVSIVVDLLVK 569
           ++ + PDA   SI++++  K
Sbjct: 494 DEGLAPDAVTYSILINMFAK 513


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 251/512 (49%), Gaps = 16/512 (3%)

Query: 47  PNEAFCIFDYM--LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYT 98
           P  +  +F  +  LR+HP+     +FN+L+       +LA      + +   GL P+  T
Sbjct: 189 PQASLDVFRSLIELRLHPN---HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVT 245

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           YN L+N  C+ G +        R+ R    P   T+N+L+        I +A  +   + 
Sbjct: 246 YNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT 305

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A+G EP++ TYN L  GLC+ G    A  L +EM      +G    P+ VTY+T++D   
Sbjct: 306 AYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER----LGTAL-PDVVTYNTLVDACF 360

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K      A  L  +M+D+ + P +VT+N ++  LC      EA     ++ ++G+ P V+
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++D  CK   + +A  L+D MV +G++ +  T NT++   C M +   AEEL  S 
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D+VSY  ++  Y K    E AL L+ +M+ + + P++ TYNTL  GL  + ++
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A+   +E    G+  D  TY   I   CK G +  A      +     + D+   N L
Sbjct: 541 KEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           ++GLC  G+L  A +LF S        +V+TYN +IQ +C  G +D A   F DME    
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            PD  T+++++          + + +LHK+ +
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 10/419 (2%)

Query: 150 AAALFTKLKAF-GCEPNVITYNTLINGLCRTGHTM--IALNLFEEMANGNGEIGVVCKPN 206
           AA L   L+   G  P++   N +++ L R+  T+   +L++F  +      I +   PN
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL------IELRLHPN 207

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             T++ ++   C +G +  A A    M+   ++PD VTYN+L++  C      EA+ L  
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G+ P+  T+N ++    +   + +A+++++ M   G  P+  TYN L  G C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAG 327

Query: 327 KINRAEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           K++ A  L   ME +G    D V+YN L++   K +   +AL L  EM  KG+KPT+VT+
Sbjct: 328 KVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +   L +  ++E AL   +++  +G+A D  TY T ID  CK G + +A  L   +  
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              ++D    N ++  LCK  R + A EL  S P    VP+ V+Y  ++     +   + 
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           A  L+  M E    P + T++ LI G  R+    +  + L++  EK ++PD +  +I++
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIII 566



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 53/290 (18%)

Query: 47  PNEAFCIFDYML--RMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYT 98
           P  A  ++D M+  ++ PS   +S++N L+  L + +     ++        GL P+  T
Sbjct: 505 PEPALRLWDQMIERKLIPS---ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETT 561

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           YNI+I+ +CK G +   F    +++ + F P+  T N+L+ GL    ++ +A  LF    
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G + +VITYNTLI  +C+ G    AL+ F++M     E+  + +P+  TY+ ++  L 
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM-----EVKGL-QPDAFTYNVVLSALS 675

Query: 219 KEGFVDKAKALFLQMKDEN----------INPDVV------------------------- 243
           + G  ++A  +  ++ D            + P                            
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 244 -TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            TY   ++GLC      EAK +  EMM +G+     T+  +M+ L K +K
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 165/533 (30%), Positives = 260/533 (48%), Gaps = 17/533 (3%)

Query: 39  EGDINVITPNEAFC--IFDYMLRMHPSPPPVSSFNILLASL------AKNKHYDTRLNAT 90
            G ++V+      C  +FD M+R +   P V + N +L  L      +K K+    +   
Sbjct: 151 HGVVDVLIAGHVXCLLVFDKMIR-NGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIME 149
           G+ P + TYN +++ +CK GRV         +  R C+ PN  T+N L+ GL  +  + +
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCY-PNDVTYNVLVNGLSKKGELEQ 268

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  ++   G   +  TYN LING C+ G  + A +L EEM N          P   T
Sbjct: 269 AKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRA------FPTLST 322

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++ GLCK   V   +  F  M      PD+V++NSL++G C     +EA  LF E+ 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            + + P+V+T+N ++  LC    +D A RL   M  +G+ P+  TY  L++G   +G ++
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A   F  M S G K D  +YN  I G  K  +   A S+  EM++ G  P V+TYN   
Sbjct: 443 MARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFV 502

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L +    E A  L + M  DG+  D  TYT+ I+G  KNG++ +A E+F  +      
Sbjct: 503 HALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  Y  LI        L  A+  F  +    +  NV+TYN +I GLC   +MD+A   
Sbjct: 563 PSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKY 622

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           F +MEE    P+  ++ +LI+    +    +   L  +M ++K+ PD+   S+
Sbjct: 623 FDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 230/475 (48%), Gaps = 6/475 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P++   N ++        +S     +G + +    P   T+N+++     E R+ +A
Sbjct: 175 GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQA 234

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L ++++  GC PN +TYN L+NGL + G    A  L EEM N    +      +  TY
Sbjct: 235 LELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV------SAYTY 288

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I+G C++G   +A  L  +M +    P + TYN+L++GLC        +  F +M+ 
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLK 348

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
               P +V+FN ++   C+   + EA  L D +  R + P   TYNTL+ G C+ G ++ 
Sbjct: 349 SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDA 408

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  L   M   G   D  +Y IL+NG  K   V  A   + EM+SKG+KP    YNT  +
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIV 468

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +I     A  + +EM   G   D  TY  F+  LC+ G   EA +L   +       
Sbjct: 469 GEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIP 528

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  +I+G  K+G L+ A E+F  +    + P+VVTY ++I        +D A   F
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYF 588

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             M E +   +VIT++ +I+G        +  +   +M+EK ++P+    +I+++
Sbjct: 589 SKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 197/370 (53%), Gaps = 6/370 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           FP L TYN L+   CK  +V+   + F  +L+S FTP+  +FNSL+ G      I EA  
Sbjct: 317 FPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFL 376

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           LF +LK     P VITYNTLI+GLC  G+   AL L +EM +          P+  TY+ 
Sbjct: 377 LFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG------LFPDIFTYTI 430

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +++G  K G+V  A+  F +M  + + PD   YN+ I G     D + A  +  EM+  G
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P V+T+NV +  LC+    +EA  LL+ MV  G+ P+  TY ++++GF   G + +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E+F  M S G     V+Y +LI+ +   + ++ A   + +M+ K +   V+TYN +  GL
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               +++ A K FDEM+  G+  +  +YT  I+  C  GY  EA+ L+R +   K + D 
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670

Query: 453 QAYNCLIDGL 462
             ++  +  L
Sbjct: 671 FTHSVFLKNL 680



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 207/412 (50%), Gaps = 6/412 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F K+   G  P+V   N ++  L        A N++  M     + G+  KP  VTY+T
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMME----QFGI--KPTVVTYNT 220

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++D  CKEG VD+A  L  +M++    P+ VTYN L++GL    +  +AK L  EM++ G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           +  S  T+N +++  C+     EA  L++ MV R   P   TYNTLM G C   ++    
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
             F  M       D VS+N L+ GYC+   + EA  L+ E+  + + PTV+TYNTL  GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                ++ AL+L  EM   G+  D  TYT  ++G  K GY+  A   F  +     + D 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            AYN  I G  K      A+ +   +      P+V+TYN+ +  LC  G  ++A DL  +
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           M  +   PD +T+  +I+GF++     K  E+ ++M  K V P     ++++
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 167/342 (48%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F +M    + PDV   N ++  L   N  ++AK ++  M   G++P+VVT+N ++D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K  ++D+A  LL  M +RG  PN  TYN L++G    G++ +A+ L   M + G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LING+C+     EA  L  EMV++   PT+ TYNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            +     D  ++ + + G C+ G I EA  LF  L+       +  YN LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A  L   +    L P++ TY I++ G    G +  AR  F +M      PD   ++  
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           I G ++I + S    +  +M      PD    ++ V  L + 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 187/390 (47%), Gaps = 37/390 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-TRLNATGLF-----PNLYTYNIL 102
           EAF + + M+    + P +S++N L+  L K       RL  + +      P++ ++N L
Sbjct: 303 EAFDLVEEMVNRR-AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSL 361

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +  +C+ G +S  F+ F  +      P   T+N+LI GL     +  A  L  ++   G 
Sbjct: 362 LYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGL 421

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGN-------------GEIGVV------- 202
            P++ TY  L+NG  + G+  +A   F EM +               GE+ +        
Sbjct: 422 FPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFS 481

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      P+ +TY+  +  LC++G  ++A  L   M  + + PD VTY S+I+G  
Sbjct: 482 MQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFV 541

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                 +A+ +F EM+ +GV PSVVT+ V++      + +D A      M+++ V  N  
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVI 601

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYN +++G C+  +++ A + F  ME  G   +  SY ILIN  C     EEAL LYREM
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + + I+P   T++     L   +QV HA++
Sbjct: 662 LDRKIQPDSFTHSVFLKNLHRDYQV-HAVQ 690



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 393 FEIHQVEHAL--------KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           FE+H V   L         +FD+M R+G+  D +     +  L     + +A  ++  + 
Sbjct: 148 FEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMME 207

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               +  +  YN ++D  CK GR+  A EL   +      PN VTYN+++ GL   G+++
Sbjct: 208 QFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELE 267

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           +A+ L  +M  +       T++ LI+GF +     +  +L+ +M  ++  P  S
Sbjct: 268 QAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/570 (29%), Positives = 276/570 (48%), Gaps = 20/570 (3%)

Query: 11  FSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSF 70
           FS  S    + + +FS LL     L+    +  +I+  EA  +F + LR     P   S 
Sbjct: 96  FSAFSLSSPSLKHDFSYLL-----LSVLLNESKMIS--EAADLF-FALRNEGIYPSSDSL 147

Query: 71  NILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
            +LL  L K K +   +N       +   P+ + Y   I    K+  V  G   F R+  
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P+   +N LI GL    R+ +A  LF ++ A    P++ITYNTLI+G C+ G+   
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           +  + E M   + E      P+ +T++T++ GL K G V+ A+ +  +MKD    PD  T
Sbjct: 268 SFKVRERMKADHIE------PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           ++ L  G         A  ++   +D GV+ +  T +++++ LCK  K+++A  +L   +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            +G+ PN   YNT++DG+C  G +  A     +ME  G K D ++YN LI  +C+  E+E
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A     +M  KG+ P+V TYN L  G    ++ +    +  EM+ +G   +  +Y T I
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           + LCK   ++EA  + R +        ++ YN LIDG C  G+++ A+     +    + 
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N+VTYN +I GL   G++ +A DL L++      PDV T++ LI G+       +   L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
             +MK   + P      +++ L  K  I L
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 253/536 (47%), Gaps = 41/536 (7%)

Query: 65  PPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V  +N+L+  L K K        +D  L A  L P+L TYN LI+ +CK G     F 
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEML-ARRLLPSLITYNTLIDGYCKAGNPEKSFK 270

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              R+      P+  TFN+L+KGL     + +A  +  ++K  G  P+  T++ L +G  
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330

Query: 178 RTGHTMIALNLFEEMANGNGE---------IGVVCK--------------------PNTV 208
                  AL ++E   +   +         +  +CK                    PN V
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+T+IDG C++G +  A+     M+ + + PD + YN LI   C   +   A++   +M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +GV PSV T+N+++    +  + D+   +L  M   G  PN  +Y TL++  C   K+
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ +   ME  G       YN+LI+G C   ++E+A    +EM+ KGI+  +VTYNTL
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL    ++  A  L  E+ R G+  D  TY + I G    G +   + L+  ++    
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           +  ++ Y+ LI  LC    ++    LF  +    L P+++ YN ++      G M+KA +
Sbjct: 631 KPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFN 686

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           L   M E +   D  T++ LI G +++ +  +V  L+ +M  +++ P+A   +I+V
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 227/478 (47%), Gaps = 24/478 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +F+IL    + N+  +  L        +G+  N YT +IL+N  CK G++      
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            GR +     PN   +N++I G   +  ++ A      ++  G +P+ + YN LI   C 
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 179 TGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            G          EM N   E+  +      P+  TY+ +I G  ++   DK   +  +M+
Sbjct: 437 LG----------EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           D    P+VV+Y +LI+ LC  +   EA+ +  +M D+GV P V  +N+++D  C   K++
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           +A R    M+++G+  N  TYNTL+DG  + GK++ AE+L   +   G K D  +YN LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +GY     V+  ++LY EM   GIKPT+ TY+ L + L     +E   +LF EM    + 
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMS---LK 662

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D   Y   +     +G + +A  L + +      LD   YN LI G  K G+L     L
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
              +    + P   TYNI+++G C       A   + +M+E     DV   + L+ G 
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 213/455 (46%), Gaps = 44/455 (9%)

Query: 71  NILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           +ILL +L K    +       R  A GL PN   YN +I+ +C+ G +    +    + +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P+   +N LI+       +  A     K+K  G  P+V TYN LI G  R      
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
             ++ +EM + NG +     PN V+Y T+I+ LCK   + +A+ +   M+D  ++P V  
Sbjct: 478 CFDILKEMED-NGTM-----PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN LI G C      +A R   EM+ +G++ ++VT+N ++D L    K+ EA  LL  + 
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI---------- 354
           ++G++P+  TYN+L+ G+   G + R   L+  M+  G K    +Y++LI          
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651

Query: 355 -----------------NG----YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
                            NG    Y  + ++E+A +L ++M+ K I     TYN+L LG  
Sbjct: 652 TERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           ++ ++     L DEM    +  +  TY   + G C+    + A   +R ++     LD+ 
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVC 771

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
             N L+ GL +  R K A E+  S  +G ++ +V 
Sbjct: 772 IGNELVSGLKEEWRSKEA-EIVISEMNGRMLGDVT 805



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 171/357 (47%), Gaps = 16/357 (4%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
           +++    P V ++NIL+    +   +D        +   G  PN+ +Y  LINC CK  +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +    I    +     +P    +N LI G  ++ +I +A     ++   G E N++TYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI+GL  TG    A +L  E++          KP+  TY+++I G    G V +  AL+ 
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYE 623

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +MK   I P + TY+ LI  LC        +RLF EM    ++P ++ +N ++     + 
Sbjct: 624 EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            M++A  L   M+++ +  +  TYN+L+ G   +GK+     L   M +   + +  +YN
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           I++ G+C+ K+   A   YREM  KG    V   N L  GL E  + + A  +  EM
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 3/242 (1%)

Query: 332 EELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +ELF   S+ S   KHD  SY +L     ++K + EA  L+  + ++GI P+  +   L 
Sbjct: 93  KELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLL 151

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L +  Q    + +F  +           Y   I    K   + + +ELF  ++  +  
Sbjct: 152 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY 211

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  YN LIDGLCK  R+  A +LF  +    L+P+++TYN +I G C  G  +K+  +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M+ +   P +ITF+ L+ G  +         +L +MK+   +PDA   SI+ D    
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331

Query: 570 NE 571
           NE
Sbjct: 332 NE 333


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 243/470 (51%), Gaps = 6/470 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L   GL P+L TY +LI   C++G +         +L S F  N   ++ L+  L    +
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ 341

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  L  +++A   +P+++TY+ LI+GLC+ G    A+ L++EM            PN
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR------IFPN 395

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           +  +S I+ GLC++G +  A+  F  +   N+ PDV  YN +I G     D  EA RL+ 
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            + D+ + PS+VTFN ++   CKNRK+ EA RLL+ +   G+ P+A TY TLM+ +C  G
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            IN+  EL   M     +   V+Y ++I G CK +++EE++ L  +M +KG+ P  +TYN
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+     +   +  A +L D+M    +     TY   IDGLC+ G + +A  +  +L+  
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              L   AY  +I   C  G  + A ++F  +       ++  Y+ +I  LC    +++A
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +  F  M  +  +PD   F+M+++ F R      V ELL  M +  ++ D
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 242/512 (47%), Gaps = 13/512 (2%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V SFN +++   K       K +   +   G+ P+ Y+YNILI+     G +      
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEPNVITYNTLINGLC 177
              + +    P+  T+  + KG H    +  A  +  K L   G +P+++TY  LI G C
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G+   AL L  ++ +   ++      N + YS ++  LCK G VD+A  L  +M+  N
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQL------NVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PD+VTY+ LIHGLC      +A +L+ EM    + P+    + I+  LC+   + +A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
              D ++   +RP+   YN ++DG+  +G +  A  L+  +         V++N LI G+
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CKN++V EA  L   +   G++P+ VTY TL     E   +    +L  EM    +    
Sbjct: 477 CKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTV 536

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYT  I GLCK   + E+V+L   +R      D   YN +I   CK+  ++ A+EL   
Sbjct: 537 VTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 596

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    L P   TYN++I GLC  G ++ A  + + +++       + +  +I       +
Sbjct: 597 MLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGD 656

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +  ++ H+M EK         S V++ L K
Sbjct: 657 AQRAVKVFHQMVEKGFEVSIKDYSAVINRLCK 688



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 221/418 (52%), Gaps = 14/418 (3%)

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
           A   + +A  +  K+K     P++ TYN+L+  L    HT I  +++ ++ +        
Sbjct: 95  ASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSG------ 145

Query: 203 CKPNTV-TYSTIIDGLCKEGFVDKAKALFLQMKD-ENINPDVVTYNSLIHGLCHANDWNE 260
             P +  T S I+DGLC +     A  LFL+  D +   P VV++N+++   C     + 
Sbjct: 146 -TPQSARTSSIIVDGLCGQSRFRDA-VLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADV 203

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           AK  F  M+  G+ P   ++N+++  L     M+EA  L + M ++G++P+  TY  +  
Sbjct: 204 AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK 263

Query: 321 GFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           GF L+G ++ A E+   M    G K D V+Y +LI G+C+   +EEAL L R+++S G +
Sbjct: 264 GFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQ 323

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
             V+ Y+ L   L +  QV+ AL+L  EM+ + +  D  TY+  I GLCK G + +A++L
Sbjct: 324 LNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQL 383

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           ++ +   +   +  A++ ++ GLC+ G L  A   F SL    L P+V  YNIMI G   
Sbjct: 384 YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            G +++A  L+  + + A  P ++TF+ LI+GF +  +  +   LL  +K   + P A
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSA 501



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 254/521 (48%), Gaps = 45/521 (8%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
            ++    L P++ TYN L+     +    + +  +  I  S    +A T + ++ GL  +
Sbjct: 107 VKMKEQNLRPSIQTYNSLLY---NLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQ 163

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           SR  +A     +       P+V+++NT+++  C+ G   +A + F  M     + G++  
Sbjct: 164 SRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML----KYGIL-- 217

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+T +Y+ +I GL   G +++A  L   M+ + + PD+VTY  +  G       + A+ +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 265 FIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
             +M+ D+G++P +VT+ V++   C+   ++EA RL   ++  G + N   Y+ L+   C
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM---------- 373
             G+++ A +L   ME+   + D V+Y+ILI+G CK  +V++A+ LY+EM          
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 374 ----VSKG---------------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
               + KG                     ++P V  YN +  G  ++  VE A++L+  +
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +   +     T+ + I G CKN  ++EA  L  ++++   E     Y  L++  C+ G +
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
               EL   +    + P VVTY ++I+GLC   +++++  L  DM     APD IT++ +
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTI 577

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           I  F +  +  K  ELL  M    + P  +  ++++D L +
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCR 618



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 166/340 (48%), Gaps = 6/340 (1%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L+  + Y   L  + L P++  YNI+I+ + K+G V      + R+     TP+  TFNS
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           LI G     +++EA  L   +K  G EP+ +TY TL+N  C  G+      L  EM   +
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            E      P  VTY+ +I GLCK+  ++++  L   M+ + + PD +TYN++I   C A 
Sbjct: 532 IE------PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAK 585

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           D  +A  L  +M+   ++P+  T+NV++D LC+   +++A R+L  +  R +      Y 
Sbjct: 586 DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYT 645

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           T++   C+ G   RA ++F  M   G +     Y+ +IN  CK   + EA   +  M+S 
Sbjct: 646 TMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSD 705

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           G+ P    +  +         V    +L   M + G+  D
Sbjct: 706 GVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 187/372 (50%), Gaps = 35/372 (9%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND----WNEAKR--------------- 263
           V  A  + ++MK++N+ P + TYNSL++ L H +     +N+ K                
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVD 158

Query: 264 ------------LFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
                       LF+   D +   PSVV+FN IM   CK    D A     +M++ G+ P
Sbjct: 159 GLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILP 218

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  +YN L+ G  + G +  A EL   ME  G + D V+Y I+  G+     +  A  + 
Sbjct: 219 DTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREII 278

Query: 371 REMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           ++M++ +G+KP +VTY  L  G  ++  +E AL+L  ++   G   +   Y+  +  LCK
Sbjct: 279 QKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCK 338

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G + EA++L   +     + D+  Y+ LI GLCK G+++ A +L+  +    + PN   
Sbjct: 339 RGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFA 398

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           ++ +++GLC  G +  AR  F  +  +   PDV  ++++I G++++ +  +   L  +++
Sbjct: 399 HSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLR 458

Query: 550 EKKVMPDASIVS 561
           +K + P  SIV+
Sbjct: 459 DKAITP--SIVT 468



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 33/313 (10%)

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM------------------ 319
           +  + ++ E   +R + +A  +L  M ++ +RP+  TYN+L+                  
Sbjct: 84  LVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKD 143

Query: 320 --------------DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
                         DG C   +   A       +        VS+N +++ YCK    + 
Sbjct: 144 SGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADV 203

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A S +  M+  GI P   +YN L  GL     +E AL+L ++M++ G+  D  TY     
Sbjct: 204 AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK 263

Query: 426 GLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           G    G +  A E+ + +   +  + D+  Y  LI G C+ G ++ A  L   L      
Sbjct: 264 GFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQ 323

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            NV+ Y++++  LC  GQ+D+A  L  +ME N   PD++T+ +LIHG  +  +  +  +L
Sbjct: 324 LNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQL 383

Query: 545 LHKMKEKKVMPDA 557
             +M   ++ P++
Sbjct: 384 YKEMCFNRIFPNS 396



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           ++ V +AL +  +M  + ++P++ TYN+L   L+ +   +    ++++++  G     RT
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSL---LYNLRHTDIMWDVYNDIKDSGTPQSART 152

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
            +  +DGLC      +AV   R     +    + ++N ++   CK G    A   FC + 
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              ++P+  +YNI+I GL   G M++A +L  DME+    PD++T+ ++  GF  +   S
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMS 272

Query: 540 KVNELLHKM-KEKKVMPDASIVSIVV 564
              E++ KM  ++ + PD    ++++
Sbjct: 273 GAREIIQKMLTDEGLKPDLVTYTVLI 298


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 261/584 (44%), Gaps = 71/584 (12%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           +F  M       P V ++  ++ +L +    D        L  +G+ P + TYN+L++  
Sbjct: 197 VFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDAL 256

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN- 165
           CK GRV   F   GR++     P+  TF  LI GL    +  E  A+  +++ FG  PN 
Sbjct: 257 CKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNE 316

Query: 166 ----------------------------------VITYNTLINGLCRTGHTMIALNLFEE 191
                                             V+TYN +   LC+ G    A  + +E
Sbjct: 317 VIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDE 376

Query: 192 MA-------------------NGNGEIGVVC-----------KPNTVTYSTIIDGLCKEG 221
           M                     G G + +V            KPN    +  I  LCK G
Sbjct: 377 MLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSG 436

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++A  ++ Q+  + +  +V T N+LIHGLC  N+  EA ++   M++ GV+   +T+N
Sbjct: 437 KHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYN 496

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++   CK  KMDEA +L D M++RG +P+  T+N  +  +C +GK+     L   M+S 
Sbjct: 497 IMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSE 556

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G K D V+Y  +I+GYCK K++ +A     E++  G++P  V YN L  G      +  A
Sbjct: 557 GLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDA 616

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           + + D M+ +G+     TY + +  +C  G + E   +F    +   EL +  Y  +I G
Sbjct: 617 IGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQG 676

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            CK G++  A   F  +    + PN +TY  ++      G  ++A  LF +M      PD
Sbjct: 677 FCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPD 736

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            ++++ LI GF  ++   K+ E   +M  + +  D    +  VD
Sbjct: 737 SVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVD 780



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 245/520 (47%), Gaps = 23/520 (4%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           P+P P SS   LL  +  + H     +A  L     +  +L +       +        R
Sbjct: 58  PAPLPASSAQRLLQHILSDAHASASRHAEDLLSPRVSTLLLQSLVADRASLPSARRLVSR 117

Query: 122 ILRSCFTPNA------------ATFNSLIKGL---HAESRIMEAAALFTKLKAFGCEPNV 166
           +LR  F P +            AT + L++      A   +  AA  F +L A G  P++
Sbjct: 118 LLR--FNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLELSARGASPSI 175

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            T + L+  L   G   +A  +F EM +G         P+  TY+ +I  LC+ G +D A
Sbjct: 176 KTCSILVEALGCGGQLDVARKVFGEMRDGK-----TVAPDVHTYTAMIKALCRAGEIDAA 230

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
            A+  +++   I P VVTYN L+  LC +    EA RL   M++  V+PS+VTF +++  
Sbjct: 231 FAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISG 290

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           L + ++  E   +L  M   G+ PN   YN ++   C  G  + A +LF  M S G K  
Sbjct: 291 LARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQT 350

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF-LGLFEIHQVEHALKLF 405
            V+YN++    CK  E+E A  +  EM+  G+      +N++    L    +++  L+L 
Sbjct: 351 VVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLI 410

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM    +  +    T  I  LCK+G   EA E++  +      +++   N LI GLC+ 
Sbjct: 411 REMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQG 470

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
             +K A ++  ++ +  +  + +TYNIMIQG C   +MD+A  L  DM +    PD+ TF
Sbjct: 471 NNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTF 530

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           ++ +H +  + +  ++  LL +MK + + PD      ++D
Sbjct: 531 NIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIID 570



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 218/457 (47%), Gaps = 14/457 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN---KHYDTRLNA---TGLFPNLYTYNI 101
           +EA  +FD M+        V ++N++  +L K    +H +  L+     G+  +   +N 
Sbjct: 333 SEALKLFDEMVS-KGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNS 391

Query: 102 LINCFCK-IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ++    +  GR+ L       +L     PN A   + I+ L    +  EAA ++ ++   
Sbjct: 392 VVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK 451

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   NV T N LI+GLC+  +   A  + + M N   E+      + +TY+ +I G CK 
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVEL------DRITYNIMIQGCCKA 505

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             +D+A  L   M      PD+ T+N  +H  C+     E   L  +M  +G++P +VT+
Sbjct: 506 SKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTY 565

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             I+D  CK + M +A+  L  +++ G+RPNA  YN L+ G+   G I+ A  +  +M+ 
Sbjct: 566 GTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKY 625

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G +   V+YN L+   C    VEE  +++ + + K I+  V+ Y  +  G  +I +++ 
Sbjct: 626 NGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDE 685

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A+  F EM   G+  +  TYTT +    K+G   EA +LF  +  L    D  +YN LI 
Sbjct: 686 AVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLIS 745

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           G C+   L    E    +   VL  +  +YN  + G+
Sbjct: 746 GFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 18/309 (5%)

Query: 69  SFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++NI++    K    D  +         G  P+L+T+NI ++ +C +G+V        ++
Sbjct: 494 TYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM 553

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P+  T+ ++I G      + +A    T+L   G  PN + YN LI G  R G+ 
Sbjct: 554 KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNI 613

Query: 183 MIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             A+ + + M  NG        +P  VTY++++  +C  G V++ KA+F Q   ++I   
Sbjct: 614 SDAIGILDTMKYNG-------IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELG 666

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V+ Y  +I G C     +EA   F EM  +G+ P+ +T+  +M    K+   +EAS+L D
Sbjct: 667 VIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFD 726

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING----Y 357
            MV  G+ P++ +YNTL+ GFC +  +++  E    M S   K D  SYN  ++G    +
Sbjct: 727 EMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPW 786

Query: 358 CKNKEVEEA 366
           C+ + V  A
Sbjct: 787 CQKEAVSNA 795



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 8/252 (3%)

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS----LYREMVSKGIK 379
           L+ ++ R   L  +  ++   H   + ++L+   C N     +LS     + E+ ++G  
Sbjct: 114 LVSRLLRFNPLSVAAAAIADSHCTATADLLVRA-CLNSPAPGSLSRAADAFLELSARGAS 172

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAV 437
           P++ T + L   L    Q++ A K+F EM RDG  VA D  TYT  I  LC+ G I  A 
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKALCRAGEIDAAF 231

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            +   LR    +  +  YN L+D LCKSGR++ A+ L   +  G + P++VT+ I+I GL
Sbjct: 232 AMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGL 291

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
               Q  +   +  +M+     P+ + ++ +I    R    S+  +L  +M  K +    
Sbjct: 292 ARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTV 351

Query: 558 SIVSIVVDLLVK 569
              +++   L K
Sbjct: 352 VTYNLIAKALCK 363



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%)

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG-VLVPNVVT 489
           G +  A + F  L        I+  + L++ L   G+L  A ++F  +  G  + P+V T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y  MI+ LC  G++D A  +  ++  +   P V+T+++L+    +     +   L  +M 
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 550 EKKVMPDASIVSIVVDLLVKNE 571
           E +V P      I++  L + +
Sbjct: 274 EGRVRPSIVTFGILISGLARGQ 295


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 237/460 (51%), Gaps = 6/460 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++LI   C++ R    F  F  +      P   TFN+++      ++      L+ ++ 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
               +  V T+N +IN LC+ G    A +    M N    +GV  KPN VTY+T+I G C
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMEN----LGV--KPNVVTYNTVIHGYC 282

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
             G V+ A+ +   MK+  + PD  TY SLI G+C      EA  +  +M + G+ P+ V
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++D  C    + +A    D MV+R + P   TYN L+    L GK++ A+ +   M
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D ++YNILINGYC+    ++A +L+ EM+SKGI+PT+VTY +L   L + +++
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  LF+++ R+G + D   +   IDG C NG +  A  L + +       D   YN L
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           + G C+ G+++ A EL   +    + P+ ++YN +I G    G ++ A  +  +M     
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGF 582

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            P ++T++ LI G  +  +     ELL +M  K + PD S
Sbjct: 583 NPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/467 (31%), Positives = 238/467 (50%), Gaps = 16/467 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++AF  FD M++     P + +FN +L+   K    +T       +    +   +YT+NI
Sbjct: 183 DDAFECFD-MMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNI 241

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +IN  CK G++       G +      PN  T+N++I G  +  R+  A  +   +K  G
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+  TY +LI+G+C+ G    A  + E+M     EIG++  P  VTY+T+IDG C +G
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMK----EIGLL--PTAVTYNTLIDGYCNKG 355

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + KA     +M    I P V TYN LIH L      +EA  +  +M D G+ P  +T+N
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++++  C+     +A  L D M+ +G++P   TY +L+       ++  A++LF  +   
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D + +N LI+G+C N  ++ A +L +EM  + I P  VTYNTL  G     +VE A
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEA 535

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L  EM+R G+  D  +Y T I G  K G I +A  +   +  +     +  YN LI G
Sbjct: 536 RELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           LCK+ +   A EL   +    + P+  TY  +I+G+   G++D + +
Sbjct: 596 LCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVDDSSE 639



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 168/316 (53%), Gaps = 6/316 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   GL P   TYN LI+ +C  G +   F     ++R    P  +T+N LI  L  E 
Sbjct: 331 KMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEG 390

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ EA  +   +   G  P+ ITYN LING CR G+   A NL +EM      I    +P
Sbjct: 391 KMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM------ISKGIQP 444

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             VTY+++I  L K   +  A  LF ++  E  +PD++ +N+LI G C   + + A  L 
Sbjct: 445 TLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALL 504

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  + + P  VT+N +M   C+  K++EA  LL  M +RG+RP+  +YNTL+ G+   
Sbjct: 505 KEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKR 564

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G IN A  +   M S+G     ++YN LI G CKN++ + A  L +EMVSKGI P   TY
Sbjct: 565 GDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTY 624

Query: 386 NTLFLGLFEIHQVEHA 401
            +L  G+ ++     A
Sbjct: 625 FSLIEGIGKVDDSSEA 640



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 180/370 (48%), Gaps = 3/370 (0%)

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           ++F E+A     +G     +++ +  +I   C+    D A   F  MK++ + P + T+N
Sbjct: 149 DVFHELAITRDRLGT---KSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +++      N       L+ EM    ++ +V TFN++++ LCK  K+ +A   +  M   
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           GV+PN  TYNT++ G+C  G++  A  +   M++ G + D  +Y  LI+G CK  ++EEA
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             +  +M   G+ PT VTYNTL  G      +  A    DEM R  +     TY   I  
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHA 385

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           L   G + EA  + + +       D   YN LI+G C+ G  K A+ L   +    + P 
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPT 445

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +VTY  +I  L    +M  A DLF  +    A+PD+I F+ LI G        +   LL 
Sbjct: 446 LVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLK 505

Query: 547 KMKEKKVMPD 556
           +M ++ ++PD
Sbjct: 506 EMDKRNIVPD 515


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/420 (32%), Positives = 229/420 (54%), Gaps = 6/420 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN LIN FCK+ R+        R+    F+P+  T+N +I  L +  ++  A  +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             +L +  C+P VITY  LI      G    AL L +EM +         KP+  TY+TI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G+CKEG VD+A  +   ++ +   PDV++YN L+  L +   W E ++L  +M  +  
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+VVT+++++  LC++ K++EA  LL LM ++G+ P+A +Y+ L+  FC  G+++ A E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
              +M S GC  D V+YN ++   CKN + ++AL ++ ++   G  P   +YNT+F  L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                  AL +  EM  +G+  D  TY + I  LC+ G + EA EL   +R  +    + 
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++ G CK+ R++ A  +  S+      PN  TY ++I+G+   G   +A +L  D+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 7/459 (1%)

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+ G           ++R  + P+      LIKG      I +A  +   L+ FG +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
             YN LING C+      A  + + M + +        P+TVTY+ +I  LC  G +D A
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +  Q+  +N  P V+TY  LI         +EA +L  EM+ +G++P + T+N I+  
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +CK   +D A  ++  +  +G  P+  +YN L+      GK    E+L   M S  C  +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+Y+ILI   C++ ++EEA++L + M  KG+ P   +Y+ L        +++ A++  +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M  DG   D   Y T +  LCKNG   +A+E+F  L  + C  +  +YN +   L  SG
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
               A  +   +    + P+ +TYN MI  LC +G +D+A +L +DM      P V+T++
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +++ GF + +       +L  M      P+ +  +++++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 212/431 (49%), Gaps = 10/431 (2%)

Query: 137 LIKGLHAESR---IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           ++K  H   R    +E+  L   +   G  P+VI    LI G     +   A+ + E + 
Sbjct: 92  MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE 151

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     +P+   Y+ +I+G CK   +D A  +  +M+ ++ +PD VTYN +I  LC
Sbjct: 152 K-------FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                + A ++  +++    QP+V+T+ ++++       +DEA +L+D M+ RG++P+  
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYNT++ G C  G ++RA E+  ++E  GC+ D +SYNIL+       + EE   L  +M
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+   P VVTY+ L   L    ++E A+ L   M+  G+  D  +Y   I   C+ G +
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A+E   T+    C  DI  YN ++  LCK+G+   A E+F  L      PN  +YN M
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
              L + G   +A  + L+M  N   PD IT++ +I    R     +  ELL  M+  + 
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504

Query: 554 MPDASIVSIVV 564
            P     +IV+
Sbjct: 505 HPSVVTYNIVL 515



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 205/410 (50%), Gaps = 6/410 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL     P+   +N+LI G    +RI +A  +  ++++    P+ +TYN +I  LC  G 
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +AL +  ++ + N      C+P  +TY+ +I+    EG VD+A  L  +M    + PD
Sbjct: 209 LDLALKVLNQLLSDN------CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           + TYN++I G+C     + A  +   +  +G +P V+++N+++  L    K +E  +L+ 
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M      PN  TY+ L+   C  GKI  A  L   M+  G   D  SY+ LI  +C+  
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A+     M+S G  P +V YNT+   L +  + + AL++F ++   G + ++ +Y 
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T    L  +G  I A+ +   +     + D   YN +I  LC+ G +  A+EL   +   
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
              P+VVTYNI++ G C   +++ A ++   M  N   P+  T+ +LI G
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 191/410 (46%), Gaps = 35/410 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+    K    D       R+ +    P+  TYNI+I   C  G++ L    
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L     P   T+  LI+    E  + EA  L  ++ + G +P++ TYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
            G    A  +   +     E  V+                             C PN VT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I  LC++G +++A  L   MK++ + PD  +Y+ LI   C     + A      M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P +V +N ++  LCKN K D+A  +   + + G  PN+ +YNT+       G   
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  +   M S G   D+++YN +I+  C+   V+EA  L  +M S    P+VVTYN + 
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           LG  + H++E A+ + + M  +G   +  TYT  I+G+   GY  EA+EL
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 175/343 (51%), Gaps = 4/343 (1%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           + H  C + ++ E+  L   M+ +G  P V+    ++      R + +A R+++++ + G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            +P+   YN L++GFC M +I+ A  +   M S     D V+YNI+I   C   +++ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            +  +++S   +PTV+TY  L         V+ ALKL DEM   G+  D  TY T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK G +  A E+ R L +  CE D+ +YN L+  L   G+ +   +L   +      PNV
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTY+I+I  LC DG++++A +L   M+E    PD  ++D LI  F R        E L  
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           M     +PD    + V+  L KN  + ++L  F    + GEVG
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIF---GKLGEVG 433



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 181/360 (50%), Gaps = 1/360 (0%)

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+ G   ++  L   M  +  NPDV+    LI G     +  +A R+ +E++++  QP V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             +N +++  CK  ++D+A+R+LD M  +   P+  TYN ++   C  GK++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           + S  C+   ++Y ILI        V+EAL L  EM+S+G+KP + TYNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V+ A ++   ++  G   D  +Y   +  L   G   E  +L   +   KC+ ++  Y+ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LC+ G+++ A  L   +    L P+  +Y+ +I   C +G++D A +    M  + 
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             PD++ ++ ++    +  +  +  E+  K+ E    P++S  + +   L  +   +++L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 179/354 (50%), Gaps = 16/354 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+ +       D  L       + GL P+++TYN +I   CK G V   F  
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 119 FGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              + L+ C  P+  ++N L++ L  + +  E   L TK+ +  C+PNV+TY+ LI  LC
Sbjct: 286 VRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R G    A+NL + M     E G+   P+  +Y  +I   C+EG +D A      M  + 
Sbjct: 345 RDGKIEEAMNLLKLMK----EKGLT--PDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+V YN+++  LC     ++A  +F ++ + G  P+  ++N +   L  +     A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            ++  M+  G+ P+  TYN+++   C  G ++ A EL   M S       V+YNI++ G+
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFDEMQR 410
           CK   +E+A+++   MV  G +P   TY  L  G+ F  ++ E A++L +++ R
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVR 571


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 257/532 (48%), Gaps = 23/532 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF----------PNLY 97
             A  + D + R     P   S+N++L+ LA+    D   +A  L+          P  +
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLAR---ADCHADALALYRRMVHRDRVPPTTF 176

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T+ +     C++GR +        + R    P+A  + ++I  L  +  + EAA L  ++
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              GC  +V T++ ++ G+C  G    A  L + M          C P  +TY  ++ GL
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG------CMPGVMTYGFLLQGL 290

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+    D+A+A+  ++ + N    VV +N++I G        EA  L+  M  +G QP  
Sbjct: 291 CRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T++++M  LCK  ++  A RLL  M ++G  PN  TY  ++  FC  G  +    L   
Sbjct: 347 HTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G   +   YN +I   CK+  ++EA+ L +EM S+G  P + +YNT+   L    Q
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  +F+ +  +GV A+  TY T I  L ++G   +AV L + + +  C LD+ +YN 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  +CK G +  +  L   +    + PN V+YNI+I  LC + ++  A +L   M    
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            APD++T++ LI+G  ++        LL K+  + V PD    +I++    K
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 234/489 (47%), Gaps = 31/489 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           +A  ++  M+     PP   +F +   +L +    +  L         G  P+   Y  +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTV 216

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C  G V+        +L      +  TF+ +++G+    R+ EAA L  ++   GC
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 163 EPNVITYNTLINGLCRT-----GHTMIA----LN--LFEEMANG---NGEIGVV------ 202
            P V+TY  L+ GLCR         M+     LN  LF  +  G    G++         
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYET 336

Query: 203 -----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                C+P+  TYS ++ GLCK G +  A  L  +M+ +   P+VVTY  ++H  C    
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 396

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           W++ + L  EM  +G+  +   +N ++  LCK+ +MDEA  L+  M  +G  P+ C+YNT
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           ++   C   ++  AE +F ++   G   + ++YN +I+   ++   ++A+ L +EM+  G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
               VV+YN L   + +   V+ +L L +EM   G+  +  +Y   I  LCK   + +A+
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           EL + +       DI  YN LI+GLCK G +  A  L   L +  + P+++TYNI+I   
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636

Query: 498 CNDGQMDKA 506
           C    +D A
Sbjct: 637 CKVRLLDDA 645



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 193/384 (50%), Gaps = 33/384 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  P + TY  L+   C++ +        GR+       N   FN++I G  AE 
Sbjct: 270 RMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEG 325

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV--- 202
           ++ EA  L+  +   GC+P+  TY+ L++GLC+ G    A+ L  EM        VV   
Sbjct: 326 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYT 385

Query: 203 ------CKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
                 CK                     N+  Y+ +I  LCK+G +D+A  L  +M+ +
Sbjct: 386 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQ 445

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             NPD+ +YN++I+ LC+     EA+ +F  ++++GV  + +T+N I+  L ++ +  +A
Sbjct: 446 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 505

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            RL   M+  G   +  +YN L+   C  G ++R+  L   M   G K ++VSYNILI+ 
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK + V +AL L ++M+++G+ P +VTYNTL  GL ++  +  AL L +++  + V  D
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625

Query: 417 TRTYTTFIDGLCKNGYIIEAVELF 440
             TY   I   CK   + +A  L 
Sbjct: 626 IITYNILISWHCKVRLLDDAAMLL 649



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 153/336 (45%), Gaps = 5/336 (1%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDE 295
            + P   +YN ++  L  A+   +A  L+  M+ +  V P+  TF V    LC+  + +E
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  LL  M + G  P+A  Y T++   C  G +  A  L   M  MGC  D  +++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G C    V EA  L   M++KG  P V+TY  L  GL  + Q + A  +   +    V  
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV- 312

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
               + T I G    G + EA EL+ T+ +  C+ D   Y+ L+ GLCK GR+  A  L 
Sbjct: 313 ---LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +      PNVVTY I++   C +G  D  R L  +M       +   ++ +I+   + 
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               +   L+ +M+ +   PD    + ++  L  NE
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 10/387 (2%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVV 243
           AL+L +++       GV  +P+  +Y+ ++  L +      A AL+ +M   + + P   
Sbjct: 122 ALHLLDQLPR---RFGV--QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTF 176

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T+      LC     NEA  L   M   G  P  V +  ++  LC    + EA+ LL+ M
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +  G   +  T++ ++ G C +G++  A  L   M + GC    ++Y  L+ G C+ ++ 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA    R M+ +  +  VV +NT+  G     ++  A +L++ M   G   D  TY+  
Sbjct: 297 DEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + GLCK G I  AV L R +       ++  Y  ++   CK+G       L   +    L
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             N   YN MI  LC DG+MD+A  L  +M      PD+ +++ +I+      +  +   
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +   + E+ V+ +    + ++  L+++
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRD 499



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 16/291 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD-TR-----LNATGLFPNLYTYNILINCFCKIGRV--SLGF 116
           P V ++ I+L S  KN  +D TR     ++A GL  N   YN +I   CK GR+  ++G 
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           I   R  + C  P+  ++N++I  L    ++ EA  +F  L   G   N ITYNT+I+ L
Sbjct: 439 IQEMRS-QGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            R G    A+ L +EM      I   C  + V+Y+ +I  +CK+G VD++  L  +M ++
Sbjct: 497 LRDGRWQDAVRLAKEM------ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I P+ V+YN LI  LC      +A  L  +M++QG+ P +VT+N +++ LCK   M  A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
             LL+ +    V P+  TYN L+   C +  ++ A  L     +  C   D
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGD 661


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 247/481 (51%), Gaps = 5/481 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R  +  + P   TY ILI+C C +G ++L F A G+I+++    NA +F  +++ L AE 
Sbjct: 3   RAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEK 62

Query: 146 RIMEAAALFTKLKA-FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           R  +A  +  +     GC P+V +Y  L+ GLC       A++L   MA    E G  C 
Sbjct: 63  RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMA----EDGDHCP 118

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN V+Y+T+I G  KE  V KA  LF +M D  I PDVVT NS+I GLC     ++A+ +
Sbjct: 119 PNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEV 178

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +M D+ + P   T+N ++     + ++ EA R+L  M + G  PN  TY+ L+D  C 
Sbjct: 179 LRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCK 238

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G    A E+  SM       +  +Y  L++GY    ++ E  +L   MV  G++P    
Sbjct: 239 FGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHI 298

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +N       +  +++ A+  F++M++ G+  D  +Y T IDGLCK G +  A+  F  + 
Sbjct: 299 FNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMI 358

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 DI  +  LI G    G+ + A ELF  +    + P VV +  MI  L  +G++ 
Sbjct: 359 DDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVT 418

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A+ LF  M   +  P+V++++ +IHG+    +  +V +LL  M    + P+A   + ++
Sbjct: 419 EAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL 478

Query: 565 D 565
           D
Sbjct: 479 D 479



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 189/403 (46%), Gaps = 38/403 (9%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P TVTY+ +I   C  G ++ A A   Q+    +  + +++  ++  LC     ++A  +
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 265 FIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDG 321
            I    + G  P V ++ V++  LC  +K +EA  L+ +M + G    PN  +Y T++ G
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F    ++ +A  LF  M   G   D V+ N +I+G CK + +++A  + R+M  K I P 
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TYN+L  G     Q++ A+++  +M R G   +  TY+  ID LCK G   EA E+  
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 442 TLRILKCELDIQAYNCLIDGLC-----------------------------------KSG 466
           ++   +   ++  Y  L+ G                                     K G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           RL  A   F  +    L+P++++Y  MI GLC  G++D A   F  M ++  +PD++ F 
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            LIHGF    +  K  EL ++M ++ + P   + + ++D L K
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFK 413



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 3/318 (0%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P+ VT+ +++   C    ++ A   L  +++ G+R NA ++  ++   C   + + A 
Sbjct: 9   VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68

Query: 333 EL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLF 389
            +       +GC  D  SY +L+ G C  K+ EEA+ L   M   G    P VV+Y T+ 
Sbjct: 69  NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G F+  +V  A  LF EM   G+  D  T  + IDGLCK   + +A E+ R +      
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM 188

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   YN L+ G   SG+LK A  +   +      PN VTY+++I  LC  G   +AR++
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M ++   P+V T+  L+HG+    +  ++N L+  M +  V PD  I +I +   VK
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVK 308

Query: 570 NEISLKSLPSFLVQERQG 587
                +++ +F    +QG
Sbjct: 309 CGRLDEAMLTFNKMRQQG 326


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 247/485 (50%), Gaps = 6/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI+   K    +     + R++   F P+  T++SL+ GL    
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I     L  +++  G +PNV T+   I  L R G    A  + + M +        C P
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGP 291

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC    +D AK +F +MK     PD VTY +L+       D +  K+ +
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P VVTF +++D LCK     EA   LD+M  +G+ PN  TYNTL+ G   +
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A ELFG+MES+G K    +Y + I+ Y K+ +   AL  + +M +KGI P +V  
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L +  +   A ++F  ++  G+  D+ TY   +    K G I EA++L   +  
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             CE D+   N LI+ L K+ R+  AW++F  +    L P VVTYN ++ GL  +G++ +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A +LF  M +    P+ ITF+ L     + +E +   ++L KM +   +PD    + ++ 
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651

Query: 566 LLVKN 570
            LVKN
Sbjct: 652 GLVKN 656



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 243/513 (47%), Gaps = 17/513 (3%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + + N  L SLAK       K     L   GL P+  TYN+++ C+ K+G +      
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ +   P+    NSLI  L+   R+ EA  +F ++K    +P V+TYNTL+ GL +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ LFE M          C PNT+T++T+ D LCK   V  A  +  +M D   
Sbjct: 586 NGKIQEAIELFEGMVQKG------CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDV TYN++I GL       EA   F   M + V P  VT   ++  + K   +++A +
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698

Query: 299 LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILING 356
           ++ + +     +P    +  L+        I+ A      + + G C+  D     +I  
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758

Query: 357 YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            CK+  V  A +L+ +     G++P + TYN L  GL E   +E A  +F +++  G   
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  TY   +D   K+G I E  EL++ +   +CE +   +N +I GL K+G +  A +L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878

Query: 476 CSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
             L       P   TY  +I GL   G++ +A+ LF  M +    P+   +++LI+GF +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             E      L  +M ++ V PD    S++VD L
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 236/476 (49%), Gaps = 13/476 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +++ L+  L K +  D+       +   GL PN+YT+ I I    + G+++  +  
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+      P+  T+  LI  L    ++  A  +F K+K    +P+ +TY TL++    
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                     + EM   +G +     P+ VT++ ++D LCK G   +A      M+D+ I
Sbjct: 341 NRDLDSVKQFWSEMEK-DGHV-----PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++ TYN+LI GL   +  ++A  LF  M   GV+P+  T+ V +D   K+     A  
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             + M  +G+ PN    N  +      G+   A+++F  ++ +G   D V+YN+++  Y 
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  E++EA+ L  EM+  G +P V+  N+L   L++  +V+ A K+F  M+   +     
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + GL KNG I EA+ELF  +    C  +   +N L D LCK+  +  A ++   +
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
                VP+V TYN +I GL  +GQ+ +A   F  M++    PD +T   L+ G ++
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVK 689



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 222/438 (50%), Gaps = 6/438 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+ ++ K L  +  + +A     K++ FG   N  +YN LI+ L ++     A+ ++  M
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                 I    +P+  TYS+++ GL K   +D    L  +M+   + P+V T+   I  L
Sbjct: 215 ------ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A   NEA  +   M D+G  P VVT+ V++D LC  RK+D A  + + M     +P+ 
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY TL+D F     ++  ++ +  ME  G   D V++ IL++  CK     EA      
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI P + TYNTL  GL  +H+++ AL+LF  M+  GV     TY  FID   K+G 
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
            + A+E F  ++      +I A N  +  L K+GR + A ++F  L    LVP+ VTYN+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           M++     G++D+A  L  +M EN   PDVI  + LI+   + +   +  ++  +MKE K
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568

Query: 553 VMPDASIVSIVVDLLVKN 570
           + P     + ++  L KN
Sbjct: 569 LKPTVVTYNTLLAGLGKN 586



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 162/556 (29%), Positives = 267/556 (48%), Gaps = 58/556 (10%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
            EA  IF Y L+     P   ++N+++   +K    D      + +   G  P++   N L
Sbjct: 486  EAKQIF-YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
            IN   K  RV   +  F R+      P   T+N+L+ GL    +I EA  LF  +   GC
Sbjct: 545  INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604

Query: 163  EPNVITYNTLINGLCRTGHTMIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN IT+NTL + LC+     +AL  LF+ M  G       C P+  TY+TII GL K G
Sbjct: 605  PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-------CVPDVFTYNTIIFGLVKNG 657

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA---------------NDWNEAKRLFI 266
             V +A   F QMK + + PD VT  +L+ G+  A               N  ++   LF 
Sbjct: 658  QVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716

Query: 267  E------MMDQGVQPSVVTFN-----------------VIMDELCKNRKMDEASRLLDLM 303
            E      + + G+  + V+F+                  I+   CK+  +  A  L +  
Sbjct: 717  EDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775

Query: 304  VQR-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
             +  GV+P   TYN L+ G      I  A+++F  ++S GC  D  +YN L++ Y K+ +
Sbjct: 776  TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835

Query: 363  VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR-TYT 421
            ++E   LY+EM +   +   +T+N +  GL +   V+ AL L+ ++  D   + T  TY 
Sbjct: 836  IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895

Query: 422  TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
              IDGL K+G + EA +LF  +    C  +   YN LI+G  K+G    A  LF  +   
Sbjct: 896  PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955

Query: 482  VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
             + P++ TY++++  LC  G++D+    F +++E+   PDV+ ++++I+G  + +   + 
Sbjct: 956  GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015

Query: 542  NELLHKMKEKK-VMPD 556
              L ++MK  + + PD
Sbjct: 1016 LVLFNEMKTSRGITPD 1031



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 257/571 (45%), Gaps = 72/571 (12%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           +F+ M      P  V+ +  LL   + N+  D+       +   G  P++ T+ IL++  
Sbjct: 315 VFEKMKTGRHKPDRVT-YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK G     F     +      PN  T+N+LI GL    R+ +A  LF  +++ G +P  
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            TY   I+   ++G ++ AL  FE+M            PN V  +  +  L K G   +A
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKG------IAPNIVACNASLYSLAKAGRDREA 487

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           K +F  +KD  + PD VTYN ++       + +EA +L  EMM+ G +P V+  N +++ 
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           L K  ++DEA ++   M +  ++P   TYNTL+ G    GKI  A ELF  M   GC  +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            +++N L +  CKN EV  AL +  +M+  G  P V TYNT+  GL +  QV+ A+  F 
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--------- 457
           +M++  V  D  T  T + G+ K   I +A ++               YNC         
Sbjct: 668 QMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNF----------LYNCADQPANLFW 716

Query: 458 -----------------------LIDGLCKSG---------------RLKFAWELFCSLP 479
                                  + +G+C+ G                +  A  LF    
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776

Query: 480 HGVLV-PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
             + V P + TYN++I GL     ++ A+D+FL ++     PDV T++ L+  + +  + 
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++ EL  +M   +   +    +IV+  LVK
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVK 867



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 255/560 (45%), Gaps = 85/560 (15%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
            +EA+ +F  M  M   P  V ++N LLA L KN      +         G  PN  T+N 
Sbjct: 555  DEAWKMFMRMKEMKLKPT-VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA-- 159
            L +C CK   V+L      +++     P+  T+N++I GL    ++ EA   F ++K   
Sbjct: 614  LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673

Query: 160  -------------------------------FGC--EPNVITYNTLI------------- 173
                                           + C  +P  + +  LI             
Sbjct: 674  YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733

Query: 174  --------NGLCRTGHTMI---------------ALNLFEEMANGNGEIGVVCKPNTVTY 210
                    NG+CR G +++               A  LFE+      ++GV  +P   TY
Sbjct: 734  SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--QPKLPTY 788

Query: 211  STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            + +I GL +   ++ A+ +FLQ+K     PDV TYN L+     +   +E   L+ EM  
Sbjct: 789  NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848

Query: 271  QGVQPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
               + + +T N+++  L K   +D+A  L  DLM  R   P ACTY  L+DG    G++ 
Sbjct: 849  HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908

Query: 330  RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
             A++LF  M   GC+ +   YNILING+ K  E + A +L++ MV +G++P + TY+ L 
Sbjct: 909  EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968

Query: 390  LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-C 448
              L  + +V+  L  F E++  G+  D   Y   I+GL K+  + EA+ LF  ++  +  
Sbjct: 969  DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028

Query: 449  ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
              D+  YN LI  L  +G ++ A +++  +    L PNV T+N +I+G    G+ + A  
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088

Query: 509  LFLDMEENAAAPDVITFDML 528
            ++  M     +P+  T++ L
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQL 1108



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 223/491 (45%), Gaps = 48/491 (9%)

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI----TYNTLING 175
           G ++R    P+ ++   + +GL +     +  + F+  K+     N++    T N ++  
Sbjct: 71  GSMIRKSSKPDLSSSEEVTRGLKS---FPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEA 127

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L   G       +F+ M         + K +T TY TI   L  +G + +A     +M++
Sbjct: 128 LRVDGKLEEMAYVFDLMQKR------IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
                +  +YN LIH L  +    EA  ++  M+ +G +PS+ T++ +M  L K R +D 
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
              LL  M   G++PN  T+   +      GKIN A E+   M+  GC  D V+Y +LI+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             C  ++++ A  ++ +M +   KP  VTY TL     +   ++   + + EM++DG   
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  T+T  +D LCK G   EA +    +R      ++  YN LI GL +  RL  A ELF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421

Query: 476 CSLPH-GV----------------------------------LVPNVVTYNIMIQGLCND 500
            ++   GV                                  + PN+V  N  +  L   
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G+  +A+ +F  +++    PD +T++M++  + ++ E  +  +LL +M E    PD  +V
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541

Query: 561 SIVVDLLVKNE 571
           + +++ L K +
Sbjct: 542 NSLINTLYKAD 552



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 153/299 (51%), Gaps = 14/299 (4%)

Query: 65   PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V+++N LL +  K+   D        ++      N  T+NI+I+   K G V      
Sbjct: 818  PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877

Query: 119  FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  ++    F+P A T+  LI GL    R+ EA  LF  +  +GC PN   YN LING  
Sbjct: 878  YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937

Query: 178  RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            + G    A  LF+ M     + GV  +P+  TYS ++D LC  G VD+    F ++K+  
Sbjct: 938  KAGEADAACALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991

Query: 238  INPDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            +NPDVV YN +I+GL  ++   EA  LF EM   +G+ P + T+N ++  L     ++EA
Sbjct: 992  LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051

Query: 297  SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
             ++ + + + G+ PN  T+N L+ G+ L GK   A  ++ +M + G   +  +Y  L N
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 36/384 (9%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASR 298
           PD+ +   +  GL    D + +   F  +     +  +  T N +++ L  + K++E + 
Sbjct: 80  PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + DLM +R ++ +  TY T+     + G + +A      M   G   +  SYN LI+   
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-------- 410
           K++   EA+ +YR M+ +G +P++ TY++L +GL +   ++  + L  EM+         
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259

Query: 411 ---------------------------DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
                                      +G   D  TYT  ID LC    +  A E+F  +
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +  + + D   Y  L+D    +  L    + +  +     VP+VVT+ I++  LC  G  
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A D    M +    P++ T++ LI G +R++      EL   M+   V P A    + 
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439

Query: 564 VDLLVKNEISLKSLPSFLVQERQG 587
           +D   K+  S+ +L +F   + +G
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKG 463


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 242/460 (52%), Gaps = 15/460 (3%)

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           + + G+V      F R+      P+  + N+++  L       +A  ++ +++  G + +
Sbjct: 86  YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V TY   I   C+T     AL L   M     E+G  C  N V Y T++ GL   G  D 
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMP----ELG--CDSNAVAYCTVVAGLYDSGEHDH 199

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A+ LF +M    + PDVV +N L+H LC      E++RL  +++ +GV P++ TFN+ + 
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259

Query: 286 ELCKNRKMD---------EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            LC+   +D         EA   L  MV  G  P+  TYN+++DG+C  G +  A  +  
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK 319

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
                G K D+ +Y  LING+CK+ + + A++++++ + KG++P++V YNTL  GL +  
Sbjct: 320 DAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQG 379

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +  AL+L +EM  +G   +  TY   I+GLCK G + +A  L        C  DI  YN
Sbjct: 380 LILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYN 439

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LIDG CK  +L  A E+   +    + P+V+TYN ++ GLC  G+ ++  ++F  MEE 
Sbjct: 440 TLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEK 499

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
              P++IT+++++    +  + ++  +LL +MK K + PD
Sbjct: 500 GCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 264/560 (47%), Gaps = 58/560 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR------- 111
           P V S N ++  L +  +++       R+   G+  ++YTY I I  FCK  R       
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168

Query: 112 ------------------VSLGFIA----------FGRILRSCFTPNAATFNSLIKGLHA 143
                             V  G             F  +L  C  P+   FN L+  L  
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG---------HTMIALNLFEEMAN 194
           +  + E+  L  K+   G  PN+ T+N  + GLCR G           + A     +M N
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
           G  E      P+ +TY++IIDG CK+G V  A  +      +   PD  TY SLI+G C 
Sbjct: 289 GGFE------PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCK 342

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
             D + A  +F + + +G++PS+V +N ++  L +   +  A +L++ M + G  PN  T
Sbjct: 343 DGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWT 402

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN +++G C MG ++ A  L     + GC  D  +YN LI+GYCK  +++ A  +   M 
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMW 462

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           S+G+ P V+TYNTL  GL +  + E  +++F  M+  G   +  TY   +D LCK   + 
Sbjct: 463 SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVN 522

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV-PNVVTYNIM 493
           EAV+L   ++    + D+ ++  L  G CK G +  A++LF  +     V     TYNI+
Sbjct: 523 EAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNII 582

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +        M+ A  LF  M+ +   PD  T+ ++I GF ++   ++  + L +  EK+ 
Sbjct: 583 VSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRF 642

Query: 554 MPDASIVSIVVD-LLVKNEI 572
           +P  +    V++ L VK+++
Sbjct: 643 IPSLTTFGRVLNCLCVKDKV 662



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 261/517 (50%), Gaps = 30/517 (5%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE---- 144
           A  L P++  +N L++  CK G V       G++L+    PN  TFN  ++GL  E    
Sbjct: 209 ARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALD 268

Query: 145 -----SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
                SR++EA     K+   G EP+ +TYN++I+G C+ G    A  + ++        
Sbjct: 269 RAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG--- 325

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
               KP+  TY ++I+G CK+G  D+A A+F     + + P +V YN+LI GL       
Sbjct: 326 ---FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLIL 382

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A +L  EM + G  P++ T+N++++ LCK   + +AS L+D  + +G  P+  TYNTL+
Sbjct: 383 PALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLI 442

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG+C   K++ A E+   M S G   D ++YN L+NG CK  + EE + +++ M  KG  
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCT 502

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P ++TYN +   L +  +V  A+ L  EM+  G+  D  ++ T   G CK G I  A +L
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQL 562

Query: 440 FRTLRILKCELDI----QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           FR +     + D+      YN ++    +   +  A +LF  + +    P+  TY ++I 
Sbjct: 563 FRRMEK---QYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVID 619

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C  G + +     L+  E    P + TF  +++     ++  +   ++H M +K ++P
Sbjct: 620 GFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQE--RQGEVG 590
           +       V+ + + +  + + P  LV++  ++G + 
Sbjct: 680 E------TVNTIFEADKKVVAAPKILVEDLLKKGHIA 710



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 245/475 (51%), Gaps = 22/475 (4%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIG-------- 110
           P V +FN L+  L K      ++    ++   G+ PNL+T+NI +   C+ G        
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273

Query: 111 -RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
            RV        +++   F P+  T+NS+I G   +  + +A  +       G +P+  TY
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
            +LING C+ G    A+ +F++       +G   +P+ V Y+T+I GL ++G +  A  L
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKD------GLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M +    P++ TYN +I+GLC     ++A  L  + + +G  P + T+N ++D  CK
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             K+D A+ +++ M  +G+ P+  TYNTL++G C  GK     E+F +ME  GC  + ++
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YNI+++  CK K+V EA+ L  EM SKG+KP VV++ TLF G  +I  ++ A +LF  M+
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRME 567

Query: 410 RD-GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +   V   T TY   +    +   +  A++LF  ++   C+ D   Y  +IDG CK G +
Sbjct: 568 KQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNI 627

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
              ++          +P++ T+  ++  LC   ++ +A  +   M +    P+ +
Sbjct: 628 TQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 216/478 (45%), Gaps = 30/478 (6%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING--------LCR 178
           F   A+T+  +++ L       E   L ++++      NV   N L+ G          R
Sbjct: 36  FKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE-----NV--NNALLEGAYIEAMKNYGR 88

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A++ FE M   N      C P+  +++ I++ L + G+ ++A  ++++M+D  +
Sbjct: 89  KGKVQEAVDTFERMDFYN------CDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGV 142

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             DV TY   I   C       A RL   M + G   + V +  ++  L  + + D A  
Sbjct: 143 QSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARE 202

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L D M+ R + P+   +N L+   C  G +  +E L G +   G   +  ++NI + G C
Sbjct: 203 LFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLC 262

Query: 359 ---------KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
                    +N  V EA    R+MV+ G +P  +TYN++  G  +   V+ A ++  +  
Sbjct: 263 REGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAV 322

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   D  TY + I+G CK+G    A+ +F+          I  YN LI GL + G + 
Sbjct: 323 FKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLIL 382

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A +L   +     +PN+ TYN++I GLC  G +  A  L  D       PD+ T++ LI
Sbjct: 383 PALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLI 442

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            G+ +  +     E++++M  + + PD    + +++ L K   S + +  F   E +G
Sbjct: 443 DGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 165/358 (46%), Gaps = 18/358 (5%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N+++  L K        H      A G  P+++TYN LI+ +CK  ++      
Sbjct: 398 PNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEM 457

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+     TP+  T+N+L+ GL    +  E   +F  ++  GC PN+ITYN +++ LC+
Sbjct: 458 VNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCK 517

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDEN 237
                 A++L  EM +         KP+ V++ T+  G CK G +D A  LF +M K  +
Sbjct: 518 AKKVNEAVDLLGEMKSKG------LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD 571

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           +     TYN ++       + N A +LF  M + G  P   T+ V++D  CK   + +  
Sbjct: 572 VCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGY 631

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           + L   +++   P+  T+  +++  C+  K++ A  +   M   G   + V  N +    
Sbjct: 632 KFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEA- 688

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             +K+V  A  +  E + K       TY  L+ G+ +   ++  L   + + R   ++
Sbjct: 689 --DKKVVAAPKILVEDLLKKGHIAYYTYELLYDGIRDKKILKKRLPTVNSLHRGASSS 744



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 10/271 (3%)

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEV 363
           + G +  A TY  ++      G+    E+L   M E++     + +Y   +  Y +  +V
Sbjct: 33  EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKV 92

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA+  +  M      P+V ++N +   L E      A K++  M+  GV +D  TYT  
Sbjct: 93  QEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIR 152

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I   CK      A+ L R +  L C+ +  AY  ++ GL  SG    A ELF  +    L
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCL 212

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF---------IR 534
            P+VV +N ++  LC  G + ++  L   + +    P++ TF++ + G          +R
Sbjct: 213 CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR 272

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   +  E L KM      PD    + ++D
Sbjct: 273 NSRVVEAEEYLRKMVNGGFEPDDLTYNSIID 303


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 256/540 (47%), Gaps = 47/540 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L+ +  K + +DT       +   G   N  TYN+LI   C+ G V   F  
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  T+ +LI GL    R  EA AL  ++     +PNV+ Y  LI+G  R
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A  + +EM      +    +PN +TY  ++ GLCK G +D+A  L  QM  ++ 
Sbjct: 235 EGNADEAFKMIKEM------VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +TYN +I G    ++  +A RL  EM + G+ P+V T+++++  LC++ + ++AS 
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMG-------------------------------- 326
           LL+ M  +G++PNA  Y  L+ G+C  G                                
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 327 KINRAEE---LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           K+ R EE    F  M+  G   ++ +Y+ LI+GY KN ++E A  L + M+  G+KP  V
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 468

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y  L    F+   +E     F  M   GV  D R Y   I  L  +G +  A  +   +
Sbjct: 469 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEI 528

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+  Y+ LI GLCK+   + A+ +   +    + PN+V YN +I GLC  G +
Sbjct: 529 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 588

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             AR++F  +      P+ +T+  LI G  ++ + S    L ++M    + PDA + S++
Sbjct: 589 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 648



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 258/512 (50%), Gaps = 27/512 (5%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           M+R +PSPP      ++LAS+ +       L+ +G   +    ++L++ + K GRV    
Sbjct: 21  MIRAYPSPP------VVLASIHR------ALSDSG-HRSPAVLDVLVDTYKKSGRVQDAA 67

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF----GCEPNVITYNTL 172
                +      P+    N+L+K L       +A AL  K++ F    G  P+V TY+TL
Sbjct: 68  EVVLMMRDRGLAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPDVYTYSTL 123

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I   C+      A  +  EM     E G  C  NTVTY+ +I GLC+ G V++A      
Sbjct: 124 IEAYCKVREFDTAKKVLVEMR----ERG--CGLNTVTYNVLIAGLCRSGAVEEAFGFKKD 177

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+D  + PD  TY +LI+GLC +   NEAK L  EM    ++P+VV +  ++D   +   
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 237

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            DEA +++  MV  GV+PN  TY+ L+ G C MG+++RA  L   M     + D ++YN+
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I G+ ++   ++A  L  EM + GI P V TY+ +  GL +  + E A  L +EM   G
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +   Y   I G C+ G +  A E+F  +  +    D+  YN LI GL K GR++ + 
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           + F  +    L+PN  TY+ +I G   +G ++ A  L   M +    P+ + +  L+  +
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            + ++  KV+     M ++ VM D  I  I++
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 223/447 (49%), Gaps = 9/447 (2%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R L      + A  + L+       R+ +AA +   ++  G  P++   N L+  L R  
Sbjct: 37  RALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRAD 96

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
              +   + E M      +G    P+  TYST+I+  CK    D AK + ++M++     
Sbjct: 97  AMALLWKVREFM------VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL 150

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           + VTYN LI GLC +    EA     +M D G+ P   T+  +++ LCK+R+ +EA  LL
Sbjct: 151 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M    ++PN   Y  L+DGF   G  + A ++   M + G + + ++Y+ L+ G CK 
Sbjct: 211 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 270

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++ A  L ++MV    +P  +TYN +  G F  H  + A +L  EM+  G++ +  TY
Sbjct: 271 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTY 330

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GLC++G   +A +L   +     + +   Y  LI G C+ G +  A E+F  +  
Sbjct: 331 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 390

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             ++P++  YN +I GL   G+++++   F  M+E    P+  T+  LIHG+++  +   
Sbjct: 391 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 450

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
             +L+ +M +  + P+     I +DLL
Sbjct: 451 AEQLVQRMLDTGLKPND---VIYIDLL 474



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 245/526 (46%), Gaps = 51/526 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ PN  TY+ L+   CK+G++    +   +++R    P+  T+N +I+G        
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  L ++++  G  PNV TY+ +I+GLC++G    A +L EEM           KPN  
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAF 363

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+ +I G C+EG V  A  +F +M   N+ PD+  YNSLI GL       E+ + F +M
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 423

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            ++G+ P+  T++ ++    KN  ++ A +L+  M+  G++PN   Y  L++ +     I
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483

Query: 329 NRAEELFGSMESMGCKHDDVSYNILIN--------------------------------- 355
            +    F SM   G   D+  Y ILI+                                 
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543

Query: 356 --GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
             G CK  + E+A  +  EM  KG+ P +V YN L  GL +   + +A  +F+ +   G+
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 603

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW- 472
             +  TYT+ IDG CK G I  A  L+  +       D   Y+ L  G   +G L+ A  
Sbjct: 604 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 663

Query: 473 ---ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
              E+F    H     ++ ++N ++ G C  G+M +   L   +      P+ +T + +I
Sbjct: 664 LIEEMFLR-GHA----SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 718

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDAS-IVSIVVDLLVKNEISL 574
            G     + S+V+ +  ++++K     A    S+ +D++ + +I L
Sbjct: 719 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 764



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 222/519 (42%), Gaps = 100/519 (19%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++I++  L ++   +        +   GL PN + Y  LI+ +C+ G VSL    
Sbjct: 325 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 384

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++ +    P+   +NSLI GL    R+ E+   F +++  G  PN  TY+ LI+G  +
Sbjct: 385 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 444

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L + M +         KPN V Y  +++   K   ++K  + F  M D+ +
Sbjct: 445 NGDLESAEQLVQRMLDTG------LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498

Query: 239 N-----------------------------------PDVVTYNSLIHGLCHANDWNEAKR 263
                                               PDV  Y+SLI GLC   D  +A  
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +  EM  +GV P++V +N ++D LCK+  +  A  + + ++ +G+ PN  TY +L+DG C
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNIL------------------------------ 353
            +G I+ A  L+  M + G   D   Y++L                              
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 678

Query: 354 ----INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
               ++G+CK  +++E L L   ++ +G+ P  +T   +  GL E  ++     +F E+Q
Sbjct: 679 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 738

Query: 410 RDGVAADTRTYTT-FIDGL-----------------CKNGYIIEAVELFRTLRILKCELD 451
           +    +  R +++ F+D +                 CK G + +A+ L   +      + 
Sbjct: 739 QKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 798

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVT 489
             +Y  ++D LC+ G+L  A  L   +   G L P +V 
Sbjct: 799 CSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 35/306 (11%)

Query: 63  SPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           S P V  ++ L++ L K    +        ++  G+ PN+  YN LI+  CK G +S   
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  IL     PN  T+ SLI G      I  A  L+ ++ A G  P+   Y+ L  G 
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652

Query: 177 CRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
              G    A+ L EEM   G+  I         +++ ++DG CK G + +   L   +  
Sbjct: 653 SSAGDLEQAMFLIEEMFLRGHASIS--------SFNNLVDGFCKRGKMQETLKLLHVIMG 704

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-------------------MMDQGVQPS 276
             + P+ +T  ++I GL  A   +E   +F+E                   M++QG  P 
Sbjct: 705 RGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 764

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            V  ++I D  CK   +D+A  L D++V +       +Y  ++D  C  GK++ A  L  
Sbjct: 765 DVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLK 823

Query: 337 SMESMG 342
            M+  G
Sbjct: 824 EMDKRG 829


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 171/590 (28%), Positives = 274/590 (46%), Gaps = 83/590 (14%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIG 110
           Y+L    + P + + N LL+SL K   ++      R+ + G  P+++++  +IN  CK G
Sbjct: 198 YLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGG 257

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           ++      F ++ +   +PN  T+N +I GL    R+  A  L  K+   G +PN+ TY 
Sbjct: 258 KMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYG 317

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGE-IGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
            LINGL       I LN F+++ +   E IG    PN V ++ +IDG CK G ++ A  +
Sbjct: 318 ALINGL-------IKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI 370

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV---------------- 273
              M  +NI P  VT  SL+ G C ++    A+    E++  G+                
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 430

Query: 274 -------------------QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                              +PS +   +++  LCK+ K  EA+ L   ++++G   +  T
Sbjct: 431 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 490

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
            N L+ G C  GK+  A  +   M   G   D ++YN LI G+C   +VE    L  EM 
Sbjct: 491 SNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMT 550

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            +GI+P + TYN L  GL  + +++ A+KL+DE +  G+ ++  TY   ++G CK   I 
Sbjct: 551 KRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 610

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---------------FCSLP 479
           +   LF  L   K EL+   YN +I   C++G +  A +L               + SL 
Sbjct: 611 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 670

Query: 480 HGV--------------------LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           HGV                     VPNVV Y  +I G C  GQMD A   +L+M      
Sbjct: 671 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 730

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           P+  T+ ++I G+ ++    K N LL KMKE  ++PD    +++ +   K
Sbjct: 731 PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 780



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 249/508 (49%), Gaps = 35/508 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++  L +N   D       ++   G+ PNL TY  LIN   K+         
Sbjct: 276 PNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHV 335

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ S F PN   FN+LI G      I  A  +   + +    P  +T  +L+ G C+
Sbjct: 336 LDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 395

Query: 179 TGHTMIALNLFEEMA---------NGNGEIGVVCK--------------------PNTVT 209
           +     A N  EE+          N    +  +CK                    P+ + 
Sbjct: 396 SDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLL 455

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            + ++ GLCK+G   +A  L+ ++ ++      VT N+LIHGLC A    EA R+  EM+
Sbjct: 456 LTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML 515

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           ++G+    +T+N ++   C   K++   RL + M +RG++P+  TYN L+ G C +GK++
Sbjct: 516 ERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLD 575

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A +L+   ++ G   +  +Y I++ GYCK   +E+  +L+ E++SK ++   + YN + 
Sbjct: 576 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 635

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
               +   V  AL+L + M+  G+  +  TY++ I G+C  G + +A  L   +R     
Sbjct: 636 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFV 695

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y  LI G CK G++  A   +  +    + PN  TY +MI G C  G M+KA +L
Sbjct: 696 PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 755

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINE 537
            + M+E+   PDV+T+++L +GF + N+
Sbjct: 756 LIKMKESGIVPDVVTYNVLTNGFCKAND 783



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 243/488 (49%), Gaps = 14/488 (2%)

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFI----AFGRILRSCFTPNAATFNSLIKGLHA 143
           +  G F     +++LI+ +    R +LGF      F  + R    P+  T N L+  L  
Sbjct: 163 SVVGRFEWTQAFDLLIHVYSTQFR-NLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVK 221

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
            +   +   +F  +    C P+V ++  +IN LC+ G    A+ LF +M     ++G+  
Sbjct: 222 ANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKME----KLGI-- 274

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PN VTY+ II+GLC+ G +D A  L  +M  + + P++ TY +LI+GL   N +++   
Sbjct: 275 SPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNH 334

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +  EM+  G  P+VV FN ++D  CK   ++ A ++ D+M+ + + P + T  +LM GFC
Sbjct: 335 VLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFC 394

Query: 324 LMGKINRAEELFGSMESMGCK-HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              +I  AE     + S G   H D  Y++ ++  CK      A    + M+S+  +P+ 
Sbjct: 395 KSDQIEHAENALEEILSSGLSIHPDNCYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSD 453

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +    L  GL +  +   A +L+  +   G  A   T    I GLC  G + EA  + + 
Sbjct: 454 LLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKE 513

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +      +D   YN LI G C  G+++  + L   +    + P++ TYN +++GLCN G+
Sbjct: 514 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 573

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D A  L+ + + +    ++ T+ +++ G+ + N    V  L +++  KK+  ++ + +I
Sbjct: 574 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 633

Query: 563 VVDLLVKN 570
           ++    +N
Sbjct: 634 IIKAHCQN 641



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 222/509 (43%), Gaps = 84/509 (16%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++  L+  L K   +D        +  +G  PN+  +N LI+ +CK+G +      
Sbjct: 311 PNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI 370

Query: 119 FGRILRSCFTPNAATFNSLIKGL-------HAESRIME---------------------- 149
              ++    TP + T  SL++G        HAE+ + E                      
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 430

Query: 150 -----AAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTMIALNL-FEEMANGNGEIGVV 202
                +A  FTK+  +    P+ +    L+ GLC+ G  + A  L F  +  G+      
Sbjct: 431 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS------ 484

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
              + VT + +I GLC  G + +A  +  +M +  +  D +TYN+LI G C+        
Sbjct: 485 -PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           RL  EM  +G+QP + T+N ++  LC   K+D+A +L D     G+  N  TY  +M+G+
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 603

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   +I   E LF  + S   + + + YNI+I  +C+N  V  AL L   M SKGI P  
Sbjct: 604 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 663

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDG------------------------------ 412
            TY++L  G+  I  VE A  L DEM+++G                              
Sbjct: 664 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 723

Query: 413 -----VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
                +  +  TYT  IDG CK G + +A  L   ++      D+  YN L +G CK+  
Sbjct: 724 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 783

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           +  A+++   +    L  + +TY  ++ G
Sbjct: 784 MDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 144/272 (52%), Gaps = 6/272 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            +   G+ P++YTYN L+   C +G++      +     S    N  T+  +++G    +
Sbjct: 548 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 607

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           RI +   LF +L +   E N I YN +I   C+ G+   AL L E M +     G++  P
Sbjct: 608 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK----GIL--P 661

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  TYS++I G+C  G V+ AK L  +M+ E   P+VV Y +LI G C     + A+  +
Sbjct: 662 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 721

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +EM+   + P+  T+ V++D  CK   M++A+ LL  M + G+ P+  TYN L +GFC  
Sbjct: 722 LEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKA 781

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGY 357
             ++ A ++   M + G   D+++Y  L++G+
Sbjct: 782 NDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 146/470 (31%), Positives = 247/470 (52%), Gaps = 6/470 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TYN L++ F   G V         + +    P   T+ +L+ GL    R+ EA +L  ++
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           +  GCEP+V+TY++L+    +      +L+LF+EM          C  +  TYS +I+ L
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG------CVADVSTYSLVINCL 643

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK   VD+A  +F +MK+E + P +  Y +L+  L      + A ++F E+ +  + P  
Sbjct: 644 CKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             +N++++ L K+ ++DEA +L+D M  + + P+  TY +L+DG    G++  A  +F  
Sbjct: 704 FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G + D V+Y  L++   K  ++  AL ++R M  K   P VVTY++L   L +  +
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           VE A   F+     G   +   Y++ ID   K G +  A+ELF  ++  +C  +I  YN 
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L+ GL K+GRL  A +L   +     VP++VTYNI+I G+   G +D+A   F  M+E  
Sbjct: 884 LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             PDVITF  LI    ++++  +  EL   M+E+   P     ++++D+L
Sbjct: 944 IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDIL 993



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 266/542 (49%), Gaps = 43/542 (7%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +F I + S  ++   D        +  +G+ P ++T+ +LI+   K G +      
Sbjct: 285 PDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKF 344

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +     +PN  T+ +L+ GL    R+ EA  +F ++K   C P+ I YNTLI+GL +
Sbjct: 345 FNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGK 404

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +A  LF+EM +     G+V  PN  TY+ +I  L K G   +A  LF  +K++  
Sbjct: 405 AGEADMACGLFKEMKDR----GLV--PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ------------------------ 274
            PDV TYN+LI  L      ++   +  EM+++G +                        
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY 518

Query: 275 PSV-------VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           PS+       +T+N +M     N  +DEA +LL++M +    P   TY TL+DG    G+
Sbjct: 519 PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A  L   ME  GC+   V+Y+ L+  + K  + EE+LSL+ EMV KG    V TY+ 
Sbjct: 579 LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +   L +   V+ AL +F  M+ +G+      Y T +  L K+  I  A+++F  L+   
Sbjct: 639 VINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS 698

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D   YN +++GL KS R+  A +L  S+ +  ++P++ TY  ++ GL   G++++A 
Sbjct: 699 LVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAF 758

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           ++F  M E    PDV+ +  L+    +  + S    +   M +K+ +PD    S ++D L
Sbjct: 759 NMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818

Query: 568 VK 569
            K
Sbjct: 819 GK 820



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 156/551 (28%), Positives = 266/551 (48%), Gaps = 72/551 (13%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++ + G  P+   YN ++    K G      I FG++ +    P+A TF   +   +   
Sbjct: 242 QMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSG 301

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R+  AA    ++   G +P V T+  LI+ L ++G+   A   F  M N      + C P
Sbjct: 302 RLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKN------LRCSP 355

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N VTY+T+++GL K G +++A  +F++MK+ N +PD + YN+LI GL  A + + A  LF
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM D+G+ P++ T+N+++  L K  +  EA +L   + ++G  P+  TYNTL+D     
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475

Query: 326 GKINRAEELF---------------------GSME---------SMGCKH-DDVSYNILI 354
           G++++   +                      G++E         S+G K   +++YN L+
Sbjct: 476 GQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLM 535

Query: 355 NGYCKNKEV-----------------------------------EEALSLYREMVSKGIK 379
           + +  N  V                                   +EA+SL REM  +G +
Sbjct: 536 SAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCE 595

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P+VVTY++L    ++  Q E +L LFDEM R G  AD  TY+  I+ LCK+  + +A+++
Sbjct: 596 PSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDV 655

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  ++    E  +  Y  L+  L K  ++ FA ++F  L    LVP+   YNIM+ GL  
Sbjct: 656 FGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVK 715

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
             ++D+A  L   M+     PD+ T+  L+ G  +     +   +  KM E+   PD   
Sbjct: 716 SNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVA 775

Query: 560 VSIVVDLLVKN 570
            + ++D+L K 
Sbjct: 776 YTSLMDVLGKG 786



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 257/519 (49%), Gaps = 12/519 (2%)

Query: 69   SFNILLASLAKNKHYDTRLNATGLF------PNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            ++N L+++   N H D  +    +       P + TY  L++   K GR+         +
Sbjct: 530  TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 123  LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
             +    P+  T++SL+   +   +  E+ +LF ++   GC  +V TY+ +IN LC++   
Sbjct: 590  EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649

Query: 183  MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
              AL++F  M     E      P    Y T++  L K+  +D A  +F ++++ ++ PD 
Sbjct: 650  DQALDVFGRMKEEGME------PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703

Query: 243  VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
              YN +++GL  +N  +EA +L   M +Q + P + T+  ++D L K+ +++EA  +   
Sbjct: 704  FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763

Query: 303  MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
            M + G  P+   Y +LMD     GK++ A  +F +M    C  D V+Y+ LI+   K   
Sbjct: 764  MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823

Query: 363  VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            VEEA   +   +SKG  P V  Y++L     +   V+ AL+LF+EMQR     +  TY  
Sbjct: 824  VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883

Query: 423  FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
             + GL K G +  A +L   +  + C  D+  YN LIDG+ K G +  A   F  +    
Sbjct: 884  LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943

Query: 483  LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            +VP+V+T+  +I+ L    ++ +A +LF  MEE    P V+T+++LI    R  +  +  
Sbjct: 944  IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003

Query: 543  ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
             + H+MK K  MPD   + I+  +L   E    +L   L
Sbjct: 1004 MIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALEEGL 1042



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 218/492 (44%), Gaps = 37/492 (7%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           ++    T+  +IK L           + T +   G   ++    +L+     T +   AL
Sbjct: 178 YSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGAL 237

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +F +M +        C P+T  Y+ +++ L K GF   A  +F ++    I PD  T+ 
Sbjct: 238 EIFNQMKSFG------CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFR 291

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
             +H    +   + A     EM+  G+ P V TF V++D L K+  +DEA +  + M   
Sbjct: 292 IFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNL 351

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
              PN  TY TL++G    G++  A E+F  M+   C  D ++YN LI+G  K  E + A
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L++EM  +G+ P + TYN +   L +  +   A +LF +++  G   D  TY T ID 
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQ-------------------------------AY 455
           L K G + + + + + +     E  I                                 Y
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N L+     +G +  A +L   +     +P VVTY  ++ GL   G++D+A  L  +ME+
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
               P V+T+  L+  F + ++  +   L  +M  K  + D S  S+V++ L K++   +
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651

Query: 576 SLPSFLVQERQG 587
           +L  F   + +G
Sbjct: 652 ALDVFGRMKEEG 663



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 189/391 (48%), Gaps = 36/391 (9%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
            ++A  +F  M +     P + ++  LL+SL K++  D        L  + L P+ + YNI
Sbjct: 650  DQALDVFGRM-KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            ++N   K  RV         +      P+  T+ SL+ GL    R+ EA  +FTK+   G
Sbjct: 709  MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---------------GEIGVV---- 202
             EP+V+ Y +L++ L + G    AL +F  MA                  G+ G V    
Sbjct: 769  HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 203  ----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                      C PN   YS++ID   K+G VD+A  LF +M+     P++VTYN+L+ GL
Sbjct: 829  YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 253  CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
              A   N A++L  EM   G  P +VT+N+++D + K   +DEA      M ++G+ P+ 
Sbjct: 889  AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDV 948

Query: 313  CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             T+ +L++    + K+  A ELF SME  G     V+YN+LI+   +  +V EA  ++ E
Sbjct: 949  ITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHE 1008

Query: 373  MVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
            M  KG  P  +T   +   L    Q  HAL+
Sbjct: 1009 MKVKGCMPDGITIGIMKRILSVREQQFHALE 1039



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 1/320 (0%)

Query: 252 LCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           + +  D + AK  F     Q G   +V T+ +++  L   ++ D   ++L  M + G R 
Sbjct: 156 VVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRI 215

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +     +L+  F     ++ A E+F  M+S GC      YN ++    K      A+ ++
Sbjct: 216 SMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVF 275

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            ++    I+P   T+           +++ A +   EM + G+     T+T  ID L K+
Sbjct: 276 GKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS 335

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I EA + F  ++ L+C  ++  Y  L++GL K+GRL+ A E+F  +      P+ + Y
Sbjct: 336 GNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAY 395

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +I GL   G+ D A  LF +M++    P++ T++++I    +     +  +L H +KE
Sbjct: 396 NTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKE 455

Query: 551 KKVMPDASIVSIVVDLLVKN 570
           +  +PD    + ++D+L K 
Sbjct: 456 QGAVPDVFTYNTLIDVLGKG 475


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 242/465 (52%), Gaps = 7/465 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y ++IN + +   +      F  ++   F P +  FN+L+  +   S   +    F + K
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
                 +V ++  +I G C  G    + +L  E+     E G    PN V Y+T+IDG C
Sbjct: 157 -IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELR----EFGF--SPNVVIYTTLIDGCC 209

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+G ++KAK LF +M    +  +  TY  LIHGL       +   ++ +M + GV P++ 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N +M++LCK+ +  +A ++ D M +RGV  N  TYNTL+ G C   K N A E+   M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S G   + ++YN LI+G+C  +++ +ALSL R++ S+G+ P++VTYN L  G  +    
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A K+  EM+  G+     TYT  ID   ++  + +A++L  ++  L    D+  Y+ L
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G C  GR+  A  LF S+      PN V YN M+ G C +G   +A  LF +MEE   
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            P+V ++  +I    +  +  +   L+ KM +  + P  SI++++
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 196/376 (52%), Gaps = 12/376 (3%)

Query: 67  VSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V SF I++    +     K +D    L   G  PN+  Y  LI+  CK G +      F 
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + +     N  T+  LI GL       +   ++ K++  G  PN+ TYN ++N LC+ G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDG 282

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            T  A  +F+EM     E GV C  N VTY+T+I GLC+E   ++A  +  QMK + INP
Sbjct: 283 RTKDAFKVFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANEVMDQMKSDGINP 336

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++TYN+LI G C      +A  L  ++  +G+ PS+VT+N+++   CK      A +++
Sbjct: 337 NLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +RG++P+  TY  L+D F     + +A +L  SME +G   D  +Y++LI+G+C  
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIK 456

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             + EA  L++ MV K  +P  V YNT+ LG  +      AL+LF EM+   +  +  +Y
Sbjct: 457 GRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516

Query: 421 TTFIDGLCKNGYIIEA 436
              I+ LCK     EA
Sbjct: 517 RYMIEVLCKERKSKEA 532



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 194/377 (51%), Gaps = 6/377 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++Y++ I+I   C+ G +   F     +    F+PN   + +LI G   +  I +A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++  FG   N  TY  LI+GL + G       ++E+M     E GV   PN  TY+ ++
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ----EHGVF--PNLHTYNCVM 275

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           + LCK+G    A  +F +M++  ++ ++VTYN+LI GLC     NEA  +  +M   G+ 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+++T+N ++D  C  RK+ +A  L   +  RG+ P+  TYN L+ GFC  G  + A ++
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ME  G K   V+Y ILI+ + ++  +E+A+ L   M   G+ P V TY+ L  G   
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++  A +LF  M       +   Y T + G CK G    A+ LFR +   +   ++ +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 455 YNCLIDGLCKSGRLKFA 471
           Y  +I+ LCK  + K A
Sbjct: 516 YRYMIEVLCKERKSKEA 532



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 175/324 (54%), Gaps = 6/324 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  N +TY +LI+   K G    GF  + ++      PN  T+N ++  L  + R  +A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDA 287

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F +++  G   N++TYNTLI GLCR      A  + ++M +          PN +TY
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDG------INPNLITY 341

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+IDG C    + KA +L   +K   ++P +VTYN L+ G C   D + A ++  EM +
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++PS VT+ +++D   ++  M++A +L   M + G+ P+  TY+ L+ GFC+ G++N 
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  LF SM     + ++V YN ++ GYCK      AL L+REM  K + P V +Y  +  
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521

Query: 391 GLFEIHQVEHALKLFDEMQRDGVA 414
            L +  + + A  L ++M   G+ 
Sbjct: 522 VLCKERKSKEAEGLVEKMIDSGIG 545



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 168/320 (52%), Gaps = 14/320 (4%)

Query: 69  SFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           ++ +L+  L KN       + Y+ ++   G+FPNL+TYN ++N  CK GR    F  F  
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYE-KMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDE 293

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     + N  T+N+LI GL  E +  EA  +  ++K+ G  PN+ITYNTLI+G C    
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL+L  ++ +          P+ VTY+ ++ G CK+G    A  +  +M++  I P 
Sbjct: 354 LGKALSLCRDLKSRG------LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY  LI     +++  +A +L   M + G+ P V T++V++   C   +M+EASRL  
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFK 467

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            MV++   PN   YNT++ G+C  G   RA  LF  ME      +  SY  +I   CK +
Sbjct: 468 SMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527

Query: 362 EVEEALSLYREMVSKGIKPT 381
           + +EA  L  +M+  GI P+
Sbjct: 528 KSKEAEGLVEKMIDSGIGPS 547



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 201/425 (47%), Gaps = 21/425 (4%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY----STIIDGLCKEGFVD 224
           Y  +IN   ++     ++  F EM +     G  C  N +T+    S+     C   F +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC---FFN 153

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           ++K          +  DV ++  +I G C A +  ++  L +E+ + G  P+VV +  ++
Sbjct: 154 ESKI--------KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLI 205

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D  CK  ++++A  L   M + G+  N  TY  L+ G    G   +  E++  M+  G  
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVF 265

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +  +YN ++N  CK+   ++A  ++ EM  +G+   +VTYNTL  GL    +   A ++
Sbjct: 266 PNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEV 325

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            D+M+ DG+  +  TY T IDG C    + +A+ L R L+       +  YN L+ G CK
Sbjct: 326 MDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCK 385

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            G    A ++   +    + P+ VTY I+I        M+KA  L   MEE    PDV T
Sbjct: 386 KGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHT 445

Query: 525 FDMLIHGFI---RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
           + +LIHGF    R+NE S+   L   M EKK  P+  I + +V    K   S ++L  F 
Sbjct: 446 YSVLIHGFCIKGRMNEASR---LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFR 502

Query: 582 VQERQ 586
             E +
Sbjct: 503 EMEEK 507



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 176/393 (44%), Gaps = 54/393 (13%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL--------------------F 265
           A++L LQ+    I     T +SL+H L  +       RL                    F
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYF 117

Query: 266 IEMMDQGVQPS----------------------------------VVTFNVIMDELCKNR 291
            EM+D+G  P                                   V +F +++   C+  
Sbjct: 118 NEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAG 177

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +++++  LL  + + G  PN   Y TL+DG C  G+I +A++LF  M   G   ++ +Y 
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           +LI+G  KN   ++   +Y +M   G+ P + TYN +   L +  + + A K+FDEM+  
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRER 297

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV+ +  TY T I GLC+     EA E+   ++      ++  YN LIDG C   +L  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKA 357

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   L    L P++VTYNI++ G C  G    A  +  +MEE    P  +T+ +LI  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDT 417

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           F R +   K  +L   M+E  + PD    S+++
Sbjct: 418 FARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 59/116 (50%)

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           W  F +     +V +V ++ I+I+G C  G+++K+ DL +++ E   +P+V+ +  LI G
Sbjct: 148 WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  E  K  +L  +M +  ++ +    ++++  L KN I  +    +   +  G
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 157/541 (29%), Positives = 255/541 (47%), Gaps = 47/541 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L+ +  K + +DT       +   G   N  TYN+LI   C+ G V   F  
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  T+ +LI GL    R  EA AL  ++     +PNV+ Y  LI+G  R
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A  + +EM      +    +PN +TY  ++ GLCK G +D+A  L  QM  ++ 
Sbjct: 362 EGNADEAFKMIKEM------VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +TYN +I G    +   +A RL  EM + G+ P+V T+++++  LC++ + ++AS 
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMG-------------------------------- 326
           LL+ M  +G++PNA  Y  L+ G+C  G                                
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 327 KINRAEE---LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           K+ R EE    F  M+  G   ++ +Y+ LI+GY KN ++E A  L + M+  G+KP  V
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 595

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y  L    F+   +E     F  M   GV  D R Y   I  L  +G +  A  +   +
Sbjct: 596 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 655

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+  Y+ LI GLCK+   + A+ +   +    + PN+V YN +I GLC  G +
Sbjct: 656 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 715

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             AR++F  +      P+ +T+  LI G  ++ + S    L ++M    + PDA + S++
Sbjct: 716 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 775

Query: 564 V 564
            
Sbjct: 776 T 776



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 258/512 (50%), Gaps = 27/512 (5%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           M+R +PSPP      ++LAS+ +       L+ +G   +    ++L++ + K GRV    
Sbjct: 148 MIRAYPSPP------VVLASIHR------ALSDSG-HRSPAVLDVLVDTYKKSGRVQDAA 194

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF----GCEPNVITYNTL 172
                +      P+    N+L+K L       +A AL  K++ F    G  P+V TY+TL
Sbjct: 195 EVVLMMRDRGMAPSIRCCNALLKDLLRA----DAMALLWKVREFMVGAGISPDVYTYSTL 250

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I   C+      A  +  EM     E G  C  NTVTY+ +I GLC+ G V++A      
Sbjct: 251 IEAYCKVREFDTAKKVLVEMR----ERG--CGLNTVTYNVLIAGLCRSGAVEEAFGFKKD 304

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+D  + PD  TY +LI+GLC +   NEAK L  EM    ++P+VV +  ++D   +   
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            DEA +++  MV  GV+PN  TY+ L+ G C MG+++RA  L   M     + D ++YN+
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I G+ ++   ++A  L  EM + GI P V TY+ +  GL +  + E A  L +EM   G
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +   Y   I G C+ G +  A E+F  +  +    D+  YN LI GL K GR++ + 
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 544

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           + F  +    L+PN  TY+ +I G   +G ++ A  L   M +    P+ + +  L+  +
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            + ++  KV+     M ++ VM D  I  I++
Sbjct: 605 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 223/447 (49%), Gaps = 9/447 (2%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R L      + A  + L+       R+ +AA +   ++  G  P++   N L+  L R  
Sbjct: 164 RALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRAD 223

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
              +   + E M      +G    P+  TYST+I+  CK    D AK + ++M++     
Sbjct: 224 AMALLWKVREFM------VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL 277

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           + VTYN LI GLC +    EA     +M D G+ P   T+  +++ LCK+R+ +EA  LL
Sbjct: 278 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 337

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M    ++PN   Y  L+DGF   G  + A ++   M + G + + ++Y+ L+ G CK 
Sbjct: 338 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 397

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++ A  L ++MV    +P  +TYN +  G F  H  + A +L  EM+  G++ +  TY
Sbjct: 398 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTY 457

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GLC++G   +A +L   +     + +   Y  LI G C+ G +  A E+F  +  
Sbjct: 458 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 517

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             ++P++  YN +I GL   G+++++   F  M+E    P+  T+  LIHG+++  +   
Sbjct: 518 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 577

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
             +L+ +M +  + P+     I +DLL
Sbjct: 578 AEQLVQRMLDTGLKPND---VIYIDLL 601



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 245/526 (46%), Gaps = 51/526 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ PN  TY+ L+   CK+G++    +   +++R    P+  T+N +I+G        
Sbjct: 377 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 436

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  L ++++  G  PNV TY+ +I+GLC++G    A +L EEM           KPN  
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAF 490

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+ +I G C+EG V  A  +F +M   N+ PD+  YNSLI GL       E+ + F +M
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            ++G+ P+  T++ ++    KN  ++ A +L+  M+  G++PN   Y  L++ +     I
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610

Query: 329 NRAEELFGSMESMGCKHDDVSYNILIN--------------------------------- 355
            +    F SM   G   D+  Y ILI+                                 
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670

Query: 356 --GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
             G CK  + E+A  +  EM  KG+ P +V YN L  GL +   + +A  +F+ +   G+
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 730

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW- 472
             +  TYT+ IDG CK G I  A  L+  +       D   Y+ L  G   +G L+ A  
Sbjct: 731 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 790

Query: 473 ---ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
              E+F    H     ++ ++N ++ G C  G+M +   L   +      P+ +T + +I
Sbjct: 791 LIEEMFLR-GHA----SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 845

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDAS-IVSIVVDLLVKNEISL 574
            G     + S+V+ +  ++++K     A    S+ +D++ + +I L
Sbjct: 846 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 891



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 133/560 (23%), Positives = 236/560 (42%), Gaps = 100/560 (17%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGL 92
           EG     +  +AF +   M     SP  V +++I++  L ++   +        +   GL
Sbjct: 427 EGHFRHHSKKDAFRLLSEMENAGISPN-VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PN + Y  LI+ +C+ G VSL    F ++ +    P+   +NSLI GL    R+ E+  
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            F +++  G  PN  TY+ LI+G  + G    A  L + M +         KPN V Y  
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG------LKPNDVIYID 599

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENIN--------------------------------- 239
           +++   K   ++K  + F  M D+ +                                  
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659

Query: 240 --PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDV  Y+SLI GLC   D  +A  +  EM  +GV P++V +N ++D LCK+  +  A 
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV--------- 348
            + + ++ +G+ PN  TY +L+DG C +G I+ A  L+  M + G   D           
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779

Query: 349 -------------------------SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                                    S+N L++G+CK  +++E L L   ++ +G+ P  +
Sbjct: 780 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 839

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT-FIDGL--------------- 427
           T   +  GL E  ++     +F E+Q+    +  R +++ F+D +               
Sbjct: 840 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIR 899

Query: 428 --CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
             CK G + +A+ L   +      +   +Y  ++D LC+ G+L  A  L   +    + P
Sbjct: 900 DHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959

Query: 486 NVVTYNIMIQGLCNDGQMDK 505
           +     I++  L   G + +
Sbjct: 960 SENQCLILLTNLHTSGYIQE 979


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 137/420 (32%), Positives = 229/420 (54%), Gaps = 6/420 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN LIN FCK+ R+        R+    F+P+  T+N +I  L +  ++  A  +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             +L +  C+P VITY  LI      G    AL L +EM +         KP+  TY+TI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G+CKEG VD+A  +   ++ +   PDV++YN L+  L +   W E ++L  +M  +  
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+VVT+++++  LC++ K++EA  LL LM ++G+ P+A +Y+ L+  FC  G+++ A E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
              +M S GC  D V+YN ++   CKN + ++AL ++ ++   G  P   +YNT+F  L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                  AL +  EM  +G+  D  TY + I  LC+ G + EA EL   +R  +    + 
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++ G CK+ R++ A  +  S+      PN  TY ++I+G+   G   +A +L  D+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 7/459 (1%)

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+ G           ++R  + P+      LIKG      I +A  +   L+ FG +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
             YN LING C+      A  + + M + +        P+TVTY+ +I  LC  G +D A
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +  Q+  +N  P V+TY  LI         +EA +L  EM+ +G++P + T+N I+  
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +CK   +D A  ++  +  +G  P+  +YN L+      GK    E+L   M S  C  +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+Y+ILI   C++ ++EEA++L + M  KG+ P   +Y+ L        +++ A++  +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M  DG   D   Y T +  LCKNG   +A+E+F  L  + C  +  +YN +   L  SG
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
               A  +   +    + P+ +TYN MI  LC +G +D+A +L +DM      P V+T++
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +++ GF + +       +L  M      P+ +  +++++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 205/410 (50%), Gaps = 6/410 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL     P+   +N+LI G    +RI +A  +  ++++    P+ +TYN +I  LC  G 
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +AL +  ++ + N      C+P  +TY+ +I+    EG VD+A  L  +M    + PD
Sbjct: 209 LDLALKVLNQLLSDN------CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           + TYN++I G+C     + A  +   +  +G +P V+++N+++  L    K +E  +L+ 
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMT 322

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M      PN  TY+ L+   C  GKI  A  L   M+  G   D  SY+ LI  +C+  
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A+     M+S G  P +V YNT+   L +  + + AL++F ++   G + ++ +Y 
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T    L  +G  I A+ +   +     + D   YN +I  LC+ G +  A+EL   +   
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
              P+VVTYNI++ G C   +++ A ++   M  N   P+  T+ +LI G
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 211/431 (48%), Gaps = 10/431 (2%)

Query: 137 LIKGLHAESR---IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           ++K  H   R    +E+  L   +   G  P+VI    LI G     +   A+ + E + 
Sbjct: 92  MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE 151

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     +P+   Y+ +I+G CK   +D A  +  +M+ ++ +PD VTYN +I  LC
Sbjct: 152 K-------FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                + A ++  +++    QP+V+T+ ++++       +DEA +L+D M+ RG++P+  
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYNT++ G C  G ++RA E+  ++E  G + D +SYNIL+       + EE   L  +M
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM 324

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+   P VVTY+ L   L    ++E A+ L   M+  G+  D  +Y   I   C+ G +
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A+E   T+    C  DI  YN ++  LCK+G+   A E+F  L      PN  +YN M
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
              L + G   +A  + L+M  N   PD IT++ +I    R     +  ELL  M+  + 
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504

Query: 554 MPDASIVSIVV 564
            P     +IV+
Sbjct: 505 HPSVVTYNIVL 515



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 191/410 (46%), Gaps = 35/410 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+    K    D       R+ +    P+  TYNI+I   C  G++ L    
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L     P   T+  LI+    E  + EA  L  ++ + G +P++ TYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
            G    A  +   +     E  V+                             C PN VT
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I  LC++G +++A  L   MK++ + PD  +Y+ LI   C     + A      M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P +V +N ++  LCKN K D+A  +   + + G  PN+ +YNT+       G   
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  +   M S G   D+++YN +I+  C+   V+EA  L  +M S    P+VVTYN + 
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           LG  + H++E A+ + + M  +G   +  TYT  I+G+   GY  EA+EL
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 174/343 (50%), Gaps = 4/343 (1%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           + H  C + ++ E+  L   M+ +G  P V+    ++      R + +A R+++++ + G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            +P+   YN L++GFC M +I+ A  +   M S     D V+YNI+I   C   +++ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            +  +++S   +PTV+TY  L         V+ ALKL DEM   G+  D  TY T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK G +  A E+ R L +   E D+ +YN L+  L   G+ +   +L   +      PNV
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTY+I+I  LC DG++++A +L   M+E    PD  ++D LI  F R        E L  
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           M     +PD    + V+  L KN  + ++L  F    + GEVG
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIF---GKLGEVG 433



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 181/360 (50%), Gaps = 1/360 (0%)

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+ G   ++  L   M  +  NPDV+    LI G     +  +A R+ +E++++  QP V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             +N +++  CK  ++D+A+R+LD M  +   P+  TYN ++   C  GK++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           + S  C+   ++Y ILI        V+EAL L  EM+S+G+KP + TYNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V+ A ++   ++  G   D  +Y   +  L   G   E  +L   +   KC+ ++  Y+ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LC+ G+++ A  L   +    L P+  +Y+ +I   C +G++D A +    M  + 
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             PD++ ++ ++    +  +  +  E+  K+ E    P++S  + +   L  +   +++L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 176/353 (49%), Gaps = 14/353 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+ +       D  L       + GL P+++TYN +I   CK G V   F  
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  ++N L++ L  + +  E   L TK+ +  C+PNV+TY+ LI  LCR
Sbjct: 286 VRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+NL + M     E G+   P+  +Y  +I   C+EG +D A      M  +  
Sbjct: 346 DGKIEEAMNLLKLMK----EKGLT--PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+V YN+++  LC     ++A  +F ++ + G  P+  ++N +   L  +     A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           ++  M+  G+ P+  TYN+++   C  G ++ A EL   M S       V+YNI++ G+C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFDEMQR 410
           K   +E+A+++   MV  G +P   TY  L  G+ F  ++ E A++L +++ R
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVR 571



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 147/283 (51%), Gaps = 12/283 (4%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           L +  S P V S+NILL +L     ++      T++ +    PN+ TY+ILI   C+ G+
Sbjct: 289 LELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +         +     TP+A +++ LI     E R+  A      + + GC P+++ YNT
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++  LC+ G    AL +F ++    GE+G  C PN+ +Y+T+   L   G   +A  + L
Sbjct: 409 VLATLCKNGKADQALEIFGKL----GEVG--CSPNSSSYNTMFSALWSSGDKIRALHMIL 462

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M    I+PD +TYNS+I  LC     +EA  L ++M      PSVVT+N+++   CK  
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           ++++A  +L+ MV  G RPN  TY  L++G    G    A EL
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 255/489 (52%), Gaps = 22/489 (4%)

Query: 27  SLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL--LASLAKNKHYD 84
           S + H R L  R G++      E     +YM     SP  ++   ++     + + K+  
Sbjct: 81  SEIRHLRRLI-RNGELE-----EGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNAS 134

Query: 85  TR---LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKG 140
                L  +G   ++ +YN+LI+ +CK G +        R+L R   +PNAAT+++++  
Sbjct: 135 QIMGILEESGAVIDVTSYNVLISGYCKSGEIEEAL----RVLDRMGVSPNAATYDAVLCS 190

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L    ++ +A  +  +     C P+V+T   LI+  C+      A+ LF EM N      
Sbjct: 191 LCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKG---- 246

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             CKP+ VTY+ +I G CK G +D+A     ++      PDV+++N ++  LC    W +
Sbjct: 247 --CKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMD 304

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A +L   M+ +G  PSVVTFN++++ LC+   + +A  +L++M + G  PN+ ++N L+ 
Sbjct: 305 AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQ 364

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GFC    I+RA E    M S GC  D V+YNIL+   CK+ +V++A+ +  ++ SKG  P
Sbjct: 365 GFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP 424

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           ++++YNT+  GL ++ + E A++L +EM   G+  D  T T+ + GL + G + EA++ F
Sbjct: 425 SLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFF 484

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             L+      +   YN +I GLCKS +   A +    +      P   TY  +I+G+  +
Sbjct: 485 HYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYE 544

Query: 501 GQMDKARDL 509
           G  + A  L
Sbjct: 545 GLAEDASKL 553



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 209/437 (47%), Gaps = 9/437 (2%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +P+     +LI+      R   A+ +   L+  G   +V +YN LI+G C++G    AL 
Sbjct: 111 SPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALR 170

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           + + M            PN  TY  ++  LC  G + +A  +  +       PDVVT   
Sbjct: 171 VLDRMG---------VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTV 221

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI   C  +   +A +LF EM ++G +P VVT+NV++   CK  ++DEA R L  +   G
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
            +P+  ++N ++   C  G+   A +L  +M   GC    V++NILIN  C+   + +AL
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           ++   M   G  P   ++N L  G      ++ A++  + M   G   D  TY   +  L
Sbjct: 342 NVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTAL 401

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK+G + +AV +   L    C   + +YN +IDGL K G+ + A EL   + +  L P++
Sbjct: 402 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 461

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           +T   ++ GL  +G++ +A   F  ++  A  P+   ++ +I G  +  + S   + L  
Sbjct: 462 ITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLAD 521

Query: 548 MKEKKVMPDASIVSIVV 564
           M  K   P  +  + ++
Sbjct: 522 MVAKGCKPTEATYTTLI 538



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 9/411 (2%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+VI    LI   C+ G T  A  +   +      I V       +Y+ +I G CK 
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT------SYNVLISGYCKS 162

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A  +  +M    ++P+  TY++++  LC      +A ++    +     P VVT 
Sbjct: 163 GEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTC 219

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            V++D  CK   + +A +L + M  +G +P+  TYN L+ GFC  G+++ A      + S
Sbjct: 220 TVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS 279

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC+ D +S+N+++   C      +A+ L   M+ KG  P+VVT+N L   L +   +  
Sbjct: 280 YGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGK 339

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL + + M + G   ++R++   I G C    I  A+E    +    C  DI  YN L+ 
Sbjct: 340 ALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLT 399

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            LCK G++  A  +   L      P++++YN +I GL   G+ + A +L  +M      P
Sbjct: 400 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           D+IT   ++ G  R  +  +  +  H +K   + P+A I + ++  L K++
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQ 510



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 167/323 (51%), Gaps = 6/323 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++ TYN+LI  FCK GR+        ++      P+  + N +++ L +  R M+A
Sbjct: 246 GCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDA 305

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   GC P+V+T+N LIN LC+ G    ALN+ E M   +G       PN+ ++
Sbjct: 306 MKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK-HGHT-----PNSRSF 359

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I G C    +D+A      M      PD+VTYN L+  LC     ++A  +  ++  
Sbjct: 360 NPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 419

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  PS++++N ++D L K  K + A  LL+ M  +G++P+  T  +++ G    GK+  
Sbjct: 420 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVRE 479

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A + F  ++    + +   YN +I G CK+++   A+    +MV+KG KPT  TY TL  
Sbjct: 480 AMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIK 539

Query: 391 GLFEIHQVEHALKLFDEMQRDGV 413
           G+      E A KL +E+   G+
Sbjct: 540 GITYEGLAEDASKLSNELYSRGL 562



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 176/353 (49%), Gaps = 3/353 (0%)

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           L + G +++       M ++  +PDV+   +LI   C       A ++   + + G    
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V ++NV++   CK+ +++EA R+LD M   GV PNA TY+ ++   C  GK+ +A ++ G
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
                 C  D V+  +LI+  CK   V +A+ L+ EM +KG KP VVTYN L  G  +  
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +++ A++   ++   G   D  ++   +  LC  G  ++A++L  T+    C   +  +N
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI+ LC+ G L  A  +   +P     PN  ++N +IQG CN   +D+A +    M   
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              PD++T+++L+    +  +      +L ++  K   P     + V+D L+K
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 438



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 3/319 (0%)

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           L    +  E  R    M ++G  P V+    ++ E CK  +   AS+++ ++ + G   +
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             +YN L+ G+C  G+I   EE    ++ MG   +  +Y+ ++   C   ++++A+ +  
Sbjct: 149 VTSYNVLISGYCKSGEI---EEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
             +     P VVT   L     +   V  A+KLF+EM+  G   D  TY   I G CK G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EA+   + L    C+ D+ ++N ++  LC  GR   A +L  ++     +P+VVT+N
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           I+I  LC  G + KA ++   M ++   P+  +F+ LI GF       +  E L  M  +
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 552 KVMPDASIVSIVVDLLVKN 570
              PD    +I++  L K+
Sbjct: 386 GCYPDIVTYNILLTALCKD 404



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L +N +++E SR L+ M  +G  P+      L+  FC +G+   A ++ G +E  G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D                                   V +YN L  G  +  ++E AL+
Sbjct: 146 VID-----------------------------------VTSYNVLISGYCKSGEIEEALR 170

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           + D M   GV+ +  TY   +  LC  G + +A+++       KC  D+     LID  C
Sbjct: 171 VLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATC 227

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K   +  A +LF  + +    P+VVTYN++I+G C  G++D+A      +      PDVI
Sbjct: 228 KESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVI 287

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           + +M++             +LL  M  K  +P     +I+++ L +  +  K+L    + 
Sbjct: 288 SHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMM 347

Query: 584 ERQGEVGES 592
            + G    S
Sbjct: 348 PKHGHTPNS 356


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 256/513 (49%), Gaps = 15/513 (2%)

Query: 49  EAFCIFDYMLRMHPSP-PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNI 101
           +A  + D M R   +P PP+  ++++L +  +   + +       L+A G   ++   N+
Sbjct: 140 DALAVLDEMPRRGCAPIPPM--YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNL 197

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  C  G V         +      P+  ++N+++KGL    R      L  ++    
Sbjct: 198 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN++T+NTLI+ LCR G       +  +M          C P+   Y+TIIDG+CKEG
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHG------CTPDIRMYATIIDGICKEG 311

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A  +  +M    + P+VV YN+L+ GLC A  W E + L  EM D+      VTFN
Sbjct: 312 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  C+N  +D    LL+ M++RG  P+  TY T+++GFC  G I+ A  L  SM + 
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GCK + +SY I++ G C  +   +A  L  +M+ +G     +T+NTL   L +   VE A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++L  +M  +G + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L + GR+    ++F ++    +  + V YN +I  LC  G+ ++A +    M  +   P+
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             T+ +LI G        +  E+L ++  K  +
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 251/514 (48%), Gaps = 22/514 (4%)

Query: 62  PSPP-PVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP   + F ++ A  A+ +  D       +   G  P    Y++++   C+ G    G
Sbjct: 117 PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGG----G 172

Query: 116 FIAFGRIL-----RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           F +  R+L     R C   +    N ++  +  +  + EA  L   L +FGCEP+V++YN
Sbjct: 173 FRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYN 231

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            ++ GLC          L EEM      + + C PN VT++T+I  LC+ G  ++   + 
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEM------VRMACPPNIVTFNTLISYLCRNGLFERVHEVL 285

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            QM +    PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC  
Sbjct: 286 AQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSA 345

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            + +E   LL  M  +    +  T+N L+D FC  G ++R  EL   M   GC  D ++Y
Sbjct: 346 ERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITY 405

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             +ING+CK   ++EA+ L + M + G KP  ++Y  +  GL    +   A  L  +M +
Sbjct: 406 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+   
Sbjct: 466 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A EL   + +  + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I 
Sbjct: 526 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 585

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              +  E  +  E L  M     +P+ S  +I++
Sbjct: 586 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 239/503 (47%), Gaps = 9/503 (1%)

Query: 70  FNILLASLAKNKHYDT--RLNAT-GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           +N ++A   +    ++  RL A   + PN YTY  ++   C  GR++        + R  
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             P    ++ +++          A  +   L A GC  +V   N ++N +C  G    AL
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L  ++ +        C+P+ V+Y+ ++ GLC        + L  +M      P++VT+N
Sbjct: 213 HLLRDLPSFG------CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 266

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LI  LC    +     +  +M++ G  P +  +  I+D +CK   ++ A  +L+ M   
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 326

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G++PN   YNTL+ G C   +    EEL   M    C  DDV++NIL++ +C+N  V+  
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + L  +M+ +G  P V+TY T+  G  +   ++ A+ L   M   G   +T +YT  + G
Sbjct: 387 IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC     ++A +L   +    C L+   +N LI+ LCK G ++ A EL   +      P+
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +++Y+ +I GL   G+ D+A +L   M     +P+ I +  +     R    +KV ++  
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            +++  +  DA + + V+  L K
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCK 589



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 193/432 (44%), Gaps = 26/432 (6%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G E   +  ++LI  LC  G T  A         G            V Y+ ++ G C+ 
Sbjct: 53  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGA---------GVVAYNAMVAGYCRA 103

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G ++ A+ L   +    + P+  TY  ++  LC      +A  +  EM  +G  P    +
Sbjct: 104 GQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMY 160

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           +VI++  C+      A R+L+ +  RG   +    N +++  C  G ++ A  L   + S
Sbjct: 161 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS 220

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL-----GLFE- 394
            GC+ D VSYN ++ G C  K       L  EMV     P +VT+NTL       GLFE 
Sbjct: 221 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           +H+V        +M   G   D R Y T IDG+CK G++  A E+   +     + ++  
Sbjct: 281 VHEV------LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 334

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+ GLC + R +   EL   +       + VT+NI++   C +G +D+  +L   M 
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE--I 572
           E    PDVIT+  +I+GF +     +   LL  M      P+    +IV+  L   E  +
Sbjct: 395 ERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454

Query: 573 SLKSLPSFLVQE 584
             + L S ++Q+
Sbjct: 455 DAEDLMSQMIQQ 466


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 159/538 (29%), Positives = 264/538 (49%), Gaps = 25/538 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L K+ + D       ++   G+   L TY++LIN   K+ + +     
Sbjct: 346 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 405

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               L   FTPN   +N+LI G      + +A  +   + + G  PN +T N++I G C+
Sbjct: 406 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 465

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  + EEM +    I      N   ++TII  LC     + A     +M   N+
Sbjct: 466 IGQMEQAECILEEMLSRGFSI------NPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+     +L+ GLC     ++A  L+  ++++G   ++VT N ++  LCK   M EA R
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M++RG   +  TYNTL+ G C  GK+    +L G M   G + D  +YN+LI+G C
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC 639

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  +++EA++L+ E  S+ + P V TY  +  G  +  ++E   KLF E+    +  ++ 
Sbjct: 640 RIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSV 699

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y T I   C+NG  +EA +L   +R          Y+ LI G+C  GR++ A  L   +
Sbjct: 700 VYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEM 759

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L+PNVV Y  +I G C  GQMDK  ++  +M      P+ IT+ ++I G+ +  + 
Sbjct: 760 RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDM 819

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD------------LLVKNEISLKSLPSFLVQE 584
               +LLH+M  K ++PD    +++ +            LL ++ +   S P FL+ E
Sbjct: 820 KTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFNS-PLFLIHE 876



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/541 (30%), Positives = 254/541 (46%), Gaps = 46/541 (8%)

Query: 65  PPVSSFNILLASLAK-----NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V +   LL+SL K       ++       G+ P++Y ++  IN FCK G+V      F
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLF 336

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             + +   +PN  T+N+LI GL     + EA     K+   G    +ITY+ LINGL + 
Sbjct: 337 FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKL 396

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A ++ +E      E G    PN V Y+T+IDG CK G +  A  +   M  + IN
Sbjct: 397 EKFNEANSVLKETL----EKGFT--PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 450

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+ VT NS+I G C      +A+ +  EM+ +G   +   F  I+  LC N + + A R 
Sbjct: 451 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 510

Query: 300 LDLMVQRGVRP-----------------------------------NACTYNTLMDGFCL 324
           L  M+ R +RP                                   N  T N L+ G C 
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G +  A  L   M   G   D ++YN LI+G CK  +VEE   L  EMV +GI+P   T
Sbjct: 571 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L  G+  I +++ A+ L++E +   +  +  TY   IDG CK   I E  +LF  L 
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               EL+   YN LI   C++G    A++L   +    + P   TY+ +I G+CN G+M+
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 750

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+ L  +M +    P+V+ +  LI G+ ++ +  KV  +L +M    + P+    ++++
Sbjct: 751 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 810

Query: 565 D 565
           D
Sbjct: 811 D 811



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 205/416 (49%), Gaps = 42/416 (10%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ +F  +AN     GV   P   T + ++  L K   ++K+  +F  M+ + ++PDV  
Sbjct: 263 AIGVFRFLANK----GVF--PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYL 315

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +++ I+  C      +A +LF +M   GV P+VVT+N ++  LCK+  +DEA R  + MV
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 375

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + GV     TY+ L++G   + K N A  +       G   ++V YN LI+GYCK   + 
Sbjct: 376 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 435

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +AL +  +MVSKGI P  VT N++  G  +I Q+E A  + +EM   G + +   +TT I
Sbjct: 436 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 495

Query: 425 D-----------------------------------GLCKNGYIIEAVELFRTLRILKCE 449
                                               GLCK G   +AVEL+  L      
Sbjct: 496 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG 555

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++   N LI GLCK+G ++ A  L   +     V + +TYN +I G C +G++++   L
Sbjct: 556 ANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 615

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +M +    PD  T+++LIHG  RI +  +   L ++ K + ++P+     +++D
Sbjct: 616 RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 671



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 39/221 (17%)

Query: 348 VSYNILINGYC---KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + ++LI+ YC   +N     A+ ++R + +KG+ PTV T   L   L + +++E +  +
Sbjct: 242 AAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWV 301

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F+ M R GV+ D   ++T                                    I+  CK
Sbjct: 302 FETM-RQGVSPDVYLFST-----------------------------------AINAFCK 325

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            G+++ A +LF  +    + PNVVTYN +I GLC  G +D+A      M ++     +IT
Sbjct: 326 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 385

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           + +LI+G +++ + ++ N +L +  EK   P+  + + ++D
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLID 426



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 1/136 (0%)

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+ +FR L        ++    L+  L K+  L+ ++ +F ++  GV  P+V  ++  I 
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGV-SPDVYLFSTAIN 321

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             C  G+++ A  LF DME+   +P+V+T++ LIHG  +     +      KM +  V  
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381

Query: 556 DASIVSIVVDLLVKNE 571
                S++++ L+K E
Sbjct: 382 TLITYSVLINGLMKLE 397


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 241/465 (51%), Gaps = 7/465 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y ++IN + +   +      F  ++   F P +  FN+L+  +   S   +    F + K
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
                 +V ++  +I G C  G    + +L  E+     E G    PN V Y+T+IDG C
Sbjct: 157 -IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELR----EFGF--SPNVVIYTTLIDGCC 209

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+G ++KAK LF +M    +  +  TY  LIHGL       +   ++ +M + GV P++ 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N +M++LCK+ +  +A ++ D M +RGV  N  TYNTL+ G C   K N A ++   M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S     + ++YN LI+G+C   ++ +ALSL R++ S+G+ P++VTYN L  G       
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A K+  EM+  G+     TYT  ID   ++  +  A++L  ++  L    D+  Y+ L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G C  G++  A  LF S+   +L PN V YN MI G C +G   +A  LF DMEE   
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL 509

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           AP+V ++  LI    +  +  +  +L+ KM +  + P  +I +++
Sbjct: 510 APNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 202/383 (52%), Gaps = 12/383 (3%)

Query: 67  VSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V SF I++    +     K +D    L   G  PN+  Y  LI+  CK G +      F 
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + +     N  T+  LI GL       +   ++ K++  G  PN+ TYN ++N LC+ G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDG 282

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            T  A  +F+EM     E GV C  N VTY+T+I GLC+E   ++A  +  QMK   INP
Sbjct: 283 RTKDAFKVFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP 336

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++TYN+LI G C      +A  L  ++  +G+ PS+VT+NV++   C+      A++++
Sbjct: 337 NLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMV 396

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +RG++P+  TY  L+D F     +  A +L  SME +G   D  +Y++LI+G+C  
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIK 456

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ EA  L++ MV K ++P  V YNT+ LG  +      AL+LF +M+   +A +  +Y
Sbjct: 457 GQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASY 516

Query: 421 TTFIDGLCKNGYIIEAVELFRTL 443
           +  I  LCK   + EA +L   +
Sbjct: 517 SYLIRVLCKERKLKEAEDLVEKM 539



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 196/380 (51%), Gaps = 6/380 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++Y++ I+I   C+ G +   F     +    F+PN   + +LI G   +  I +A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++  FG   N  TY  LI+GL + G       ++E+M     E GV   PN  TY+ ++
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ----EHGVF--PNLYTYNCVM 275

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           + LCK+G    A  +F +M++  ++ ++VTYN+LI GLC     NEA ++  +M    + 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+++T+N ++D  C   K+ +A  L   +  RG+ P+  TYN L+ GFC  G  + A ++
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ME  G K   V+Y ILI+ + ++  +E A+ L   M   G+ P V TY+ L  G   
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             Q+  A +LF  M    +  +   Y T I G CK G    A+ LFR +   +   ++ +
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 455 YNCLIDGLCKSGRLKFAWEL 474
           Y+ LI  LCK  +LK A +L
Sbjct: 516 YSYLIRVLCKERKLKEAEDL 535



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 178/323 (55%), Gaps = 6/323 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  N +TY +LI+   K G    GF  + ++      PN  T+N ++  L  + R  +A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDA 287

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F +++  G   N++TYNTLI GLCR      A  + ++M +       V  PN +TY
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS------YVINPNLITY 341

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+IDG C  G + KA +L   +K   ++P +VTYN L+ G C   D + A ++  EM +
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++PS VT+ +++D   ++  M+ A +L   M + G+ P+  TY+ L+ GFC+ G++N 
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  LF SM     + ++V YN +I GYCK      AL L+R+M  K + P V +Y+ L  
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIR 521

Query: 391 GLFEIHQVEHALKLFDEMQRDGV 413
            L +  +++ A  L ++M   G+
Sbjct: 522 VLCKERKLKEAEDLVEKMIDSGI 544



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 171/320 (53%), Gaps = 14/320 (4%)

Query: 69  SFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           ++ +L+  L KN       + Y+ ++   G+FPNLYTYN ++N  CK GR    F  F  
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYE-KMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDE 293

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     + N  T+N+LI GL  E +  EA  +  ++K++   PN+ITYNTLI+G C  G 
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGK 353

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL+L  ++ +          P+ VTY+ ++ G C++G    A  +  +M++  I P 
Sbjct: 354 LGKALSLCRDLKSRG------LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPS 407

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY  LI     +++   A +L   M + G+ P V T++V++   C   +M+EASRL  
Sbjct: 408 KVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            MV++ + PN   YNT++ G+C  G   RA  LF  ME      +  SY+ LI   CK +
Sbjct: 468 SMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKER 527

Query: 362 EVEEALSLYREMVSKGIKPT 381
           +++EA  L  +M+  GI P+
Sbjct: 528 KLKEAEDLVEKMIDSGIDPS 547



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 197/422 (46%), Gaps = 15/422 (3%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY----STIIDGLCKEGFVD 224
           Y  +IN   ++     ++  F EM +     G  C  N +T+    S+     C   F +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC---FFN 153

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           ++K          +  DV ++  +I G C A +  ++  L +E+ + G  P+VV +  ++
Sbjct: 154 ESKI--------KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLI 205

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D  CK  ++++A  L   M + G+  N  TY  L+ G    G   +  E++  M+  G  
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVF 265

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +  +YN ++N  CK+   ++A  ++ EM  +G+   +VTYNTL  GL    +   A K+
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKV 325

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            D+M+   +  +  TY T IDG C  G + +A+ L R L+       +  YN L+ G C+
Sbjct: 326 MDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCR 385

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            G    A ++   +    + P+ VTY I+I        M+ A  L   MEE    PDV T
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHT 445

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
           + +LIHGF    + ++ + L   M EK + P+  I + ++    K   S ++L  F   E
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDME 505

Query: 585 RQ 586
            +
Sbjct: 506 EK 507



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 177/393 (45%), Gaps = 54/393 (13%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL--------------------F 265
           A++L LQ+    I     T +SL+H L  +       RL                    F
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYF 117

Query: 266 IEMMDQGVQPS----------------------------------VVTFNVIMDELCKNR 291
            EM+D+G  P                                   V +F +++   C+  
Sbjct: 118 NEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAG 177

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +++++  LL  + + G  PN   Y TL+DG C  G+I +A++LF  M   G   ++ +Y 
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           +LI+G  KN   ++   +Y +M   G+ P + TYN +   L +  + + A K+FDEM+  
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRER 297

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV+ +  TY T I GLC+     EA ++   ++      ++  YN LIDG C  G+L  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKA 357

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   L    L P++VTYN+++ G C  G    A  +  +MEE    P  +T+ +LI  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           F R +      +L   M+E  ++PD    S+++
Sbjct: 418 FARSDNMETAIQLRSSMEELGLVPDVHTYSVLI 450



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 59/116 (50%)

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           W  F +     +V +V ++ I+I+G C  G+++K+ DL +++ E   +P+V+ +  LI G
Sbjct: 148 WWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +  E  K  +L  +M +  ++ +    ++++  L KN I  +    +   +  G
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHG 263


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 247/467 (52%), Gaps = 12/467 (2%)

Query: 69  SFNI---LLASLAKNKHYDT---RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           S+NI   LL  L K K   +   ++   G  P++ +Y+++++ +C++ ++         +
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
            R    PN  T+NS+I  L    R++EA  +   +K     P+ + Y TLI+G  ++G+ 
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            +   LF+EM            P+ VTY+++I GLC+ G V +A+ LF +M  + + PD 
Sbjct: 374 SVEYKLFDEMKRKK------IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTY +LI G C A +  EA  L  +M+++G+ P+VVT+  ++D LCK  ++D A+ LL  
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M ++G++PN CTYN L++G C +G I +A +L   M+  G   D ++Y  +++ YCK  E
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + +A  L R M+ KG++PT+VT+N L  G      +E   +L   M   G+  +  T+ +
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            +   C    +   +E+++ +       D   YN LI G CK+  +K AW L   +    
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
                 +YN +I+G     + ++AR LF +M  +    +   +D+ +
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 257/528 (48%), Gaps = 57/528 (10%)

Query: 87  LNATGLFPNLYTYNILIN---CFCKIGRVSLGF----IAFGRILRS------CFTPNAAT 133
           L A  LF  L  Y +L++   C   + R+S  F     AF R+ R       C+  N  +
Sbjct: 198 LEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAF-RVFREYSEVGVCW--NTVS 254

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +N ++  L    ++ EA +L  +++  G  P+V++Y+ +++G C+       L L EE+ 
Sbjct: 255 YNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQ 314

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     KPN  TY++II  LCK G V +A+ +   MK++ I PD V Y +LI G  
Sbjct: 315 RKG------LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFG 368

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            + + +   +LF EM  + + P  VT+  ++  LC+  K+ EA +L   M+ +G++P+  
Sbjct: 369 KSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEV 428

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY  L+DG+C  G++  A  L   M   G   + V+Y  L++G CK  EV+ A  L  EM
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KG++P V TYN L  GL ++  +E A+KL +EM   G   DT TYTT +D  CK G +
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEM 548

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK-----FAW---------------- 472
            +A EL R +     +  I  +N L++G C SG L+       W                
Sbjct: 549 AKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608

Query: 473 --------------ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
                         E++  +    +VP+  TYNI+I+G C    M +A  L  +M E   
Sbjct: 609 MKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           +    +++ LI GF +  +  +  +L  +M+    + +  I  I VD+
Sbjct: 669 SLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 231/452 (51%), Gaps = 14/452 (3%)

Query: 65  PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+++++        L K       L   GL PN YTYN +I+  CK GRV      
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+   + +LI G      +     LF ++K     P+ +TY ++I+GLC+
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  + A  LF EM +         KP+ VTY+ +IDG CK G + +A +L  QM ++ +
Sbjct: 405 AGKVVEARKLFSEMLSKG------LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTY +L+ GLC   + + A  L  EM ++G+QP+V T+N +++ LCK   +++A +
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L++ M   G  P+  TY T+MD +C MG++ +A EL   M   G +   V++N+L+NG+C
Sbjct: 519 LMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            +  +E+   L + M+ KGI P   T+N+L       + +   ++++  M   GV  DT 
Sbjct: 579 MSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTN 638

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I G CK   + EA  L + +      L   +YN LI G  K  + + A +LF  +
Sbjct: 639 TYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698

Query: 479 -PHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             HG +    + Y+I +     +G  +   +L
Sbjct: 699 RTHGFIAEKEI-YDIFVDVNYEEGNWENTLEL 729



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 225/426 (52%), Gaps = 7/426 (1%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM-IALNLFEEM 192
           F+   + L     ++EA  LF KL  +G   +V + N  +  L  +   +  A  +F E 
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREY 243

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           +    E+GV    NTV+Y+ I+  LC+ G V +A +L +QM+     PDVV+Y+ ++ G 
Sbjct: 244 S----EVGVCW--NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGY 297

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      +  +L  E+  +G++P+  T+N I+  LCK  ++ EA ++L +M  + + P+ 
Sbjct: 298 CQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDN 357

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             Y TL+ GF   G ++   +LF  M+      D V+Y  +I+G C+  +V EA  L+ E
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+SKG+KP  VTY  L  G  +  +++ A  L ++M   G+  +  TYT  +DGLCK G 
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A EL   +     + ++  YN LI+GLCK G ++ A +L   +      P+ +TY  
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           ++   C  G+M KA +L   M +    P ++TF++L++GF           L+  M +K 
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597

Query: 553 VMPDAS 558
           +MP+A+
Sbjct: 598 IMPNAT 603



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 182/375 (48%), Gaps = 16/375 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGL 92
           + G+++V      + +FD M R    P  V+  +++       K  + R     + + GL
Sbjct: 369 KSGNVSV-----EYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGL 423

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+  TY  LI+ +CK G +   F    +++    TPN  T+ +L+ GL     +  A  
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G +PNV TYN LINGLC+ G+   A+ L EEM            P+T+TY+T
Sbjct: 484 LLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG------FFPDTITYTT 537

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+D  CK G + KA  L   M D+ + P +VT+N L++G C +    + +RL   M+D+G
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+  TFN +M + C    M     +   M  +GV P+  TYN L+ G C    +  A 
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   M   G      SYN LI G+ K K+ EEA  L+ EM + G       Y+      
Sbjct: 658 FLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVN 717

Query: 393 FEIHQVEHALKLFDE 407
           +E    E+ L+L DE
Sbjct: 718 YEEGNWENTLELCDE 732


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 278/545 (51%), Gaps = 24/545 (4%)

Query: 31  HFRDLTTREGDINVI----TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR 86
           H  DL TR   + ++    +P  +F I   +L  H + P V  FN L  SLA+N     R
Sbjct: 92  HCLDLNTRCITLCILYRLPSPKPSFHILQPIL--HTTTPTVI-FNEL--SLARN-----R 141

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           LN          +++L++ +C+  +          +  +   P   T NSL+  L   ++
Sbjct: 142 LNVKTTL----VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNK 197

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I  A  ++ ++     + +++T+N +IN LCR G    A +       G+ E+  V KPN
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFI-----GHMEVYGV-KPN 251

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+T+I+G C  G  + A  +F  MKD+N+ PD  TYNS I  LC      EA  +  
Sbjct: 252 VVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC 311

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           ++++ G+ P+ VT+N ++D  C    +D+A    D M+ RG+  +  TYN L+    L  
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I  AE++   M   G + D V+YNI INGYC+    ++ALSL+ EMV K I+PTV TY 
Sbjct: 372 RIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L     + +++  A + F +  ++G+  D   +   IDG C NG I  A +L + +   
Sbjct: 432 SLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           K   D   +N L+ G C+  +++ A +L   +    + P+ ++YN +I G    G M  A
Sbjct: 492 KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            ++F +M      P ++T++ LI G+ +I E     ELL +M+ K + PD S    V++ 
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611

Query: 567 LVKNE 571
           +  N+
Sbjct: 612 MKTND 616



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/422 (32%), Positives = 213/422 (50%), Gaps = 38/422 (9%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           A+ +++ M++M+     + +FNI++          K K +   +   G+ PN+ TYN +I
Sbjct: 201 AWFVYEEMVKMNIKSS-IVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVI 259

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N +C  G+       F  +      P+  T+NS I  L  E RI EA+ +  KL   G  
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV--------------------- 202
           PN +TYN LI+G C  G    A    +EM N  G +  V                     
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMN-RGIVASVFTYNLLIHALFLEKRIEEAED 378

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     +P+ VTY+  I+G C+ G   KA +LF +M ++NI P V TY SLI    
Sbjct: 379 MIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFG 438

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             N  +EA+  F + + +G+ P ++ FN ++D  C N  +D A +LL  M    V P+  
Sbjct: 439 KRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEV 498

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T+NTLM G+C   K+  A++L   M+  G K D +SYN LI+GY K  ++++AL ++ EM
Sbjct: 499 TFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM 558

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +S G  PT++TYN L  G  +I + +HA +L  EMQ  G+  D  TY   I+ +  N  +
Sbjct: 559 LSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618

Query: 434 IE 435
           +E
Sbjct: 619 VE 620


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/604 (26%), Positives = 275/604 (45%), Gaps = 81/604 (13%)

Query: 44  VITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------- 93
            + P+ A   F  +  +    P V S N LL +  + + Y    +A   F          
Sbjct: 96  ALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYS---DADAFFASLSHGAFGR 152

Query: 94  ---PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
              PNL TYNI++   C  G V      F  + R    P+  T+++L+ GL    ++  A
Sbjct: 153 RIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNA 212

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG------------- 197
             L  ++  +G + + + YN L++G  RTG    A+ ++E++    G             
Sbjct: 213 LDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLD 272

Query: 198 ---------EIGVVC--------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                    E G V         + +TVTY  +I GLC+ G VD A  ++  M    +  
Sbjct: 273 GLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVL 332

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIE------------------MMDQGV--------- 273
           DV  YNSLI G C      EA + +                    ++D G+         
Sbjct: 333 DVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLK 392

Query: 274 --------QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
                    P  VTF  ++  LC+N   + A  +L+     G   +  +Y+++++ FC  
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+ + A E++ +M   GCK +   YN LING+C+  ++ +A+ +Y EM S G  PT++TY
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           NTL  GL +  + + A  L  EM   G   D RTY + I GLC++  +  A+ ++  +  
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              ++D+  +N LI GLC +G++  A+ ++  +      PN+VTYN ++ G    G +DK
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  L+  + +N   PD++T++  I G    N   +   LL+++    +MP     SI+V 
Sbjct: 633 AASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVR 692

Query: 566 LLVK 569
            ++K
Sbjct: 693 AVIK 696



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 208/417 (49%), Gaps = 30/417 (7%)

Query: 69  SFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRV--------SL 114
           ++ IL+  L ++   D+           GL  ++  YN LI  FC++GR         S 
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST 360

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK-AFGCEPNVITYNTLI 173
           GF    +I          T+N + KGL     + EA  L  +L+    C P+ +T+ TLI
Sbjct: 361 GFSGIRQI---------TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +GLC  G+   A  + E+  N   E+ V       +YS++I+  CK+G    A  ++  M
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVF------SYSSMINRFCKDGRTHDANEVYKNM 465

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             +   P+   YN+LI+G C  +  N+A +++IEM   G  P+++T+N ++D LCK  K 
Sbjct: 466 VKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKY 525

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EAS L   M++RG +P+  TY +L+ G C   K++ A  ++  +   G + D + +NIL
Sbjct: 526 QEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNIL 585

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G C   +V+EA  +Y EM  K   P +VTYNTL  G +EI  ++ A  L+  +  +G+
Sbjct: 586 IHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGL 645

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
             D  TY T I GLC      E V L   +        +  ++ L+  + K G ++ 
Sbjct: 646 KPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI 702



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 220/437 (50%), Gaps = 9/437 (2%)

Query: 141 LHAESR-IMEAAAL--FTKLKAF-GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L A SR +M  AAL  F  L +  GC P V ++NTL++   R      A   F  +++G 
Sbjct: 90  LSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG- 148

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
              G    PN  TY+ I+  LC  G VD+A +LF  ++   + PD VTY++L+ GL   +
Sbjct: 149 -AFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR-GVRPNACTY 315
             + A  L  EM + GVQ   V +N ++    +    ++A ++ + +V+  G  PN  TY
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             ++DG C +G+   A E++  M +   + D V+Y ILI+G C++ +V+ A  +Y +MV 
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G+   V  YN+L  G  E+ +   A K +D     G+   T TY     GL  +G + E
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSE 386

Query: 436 AVELFRTLR-ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           A EL + L     C  D   +  LI GLC++G    A+E+     +     +V +Y+ MI
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMI 446

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              C DG+   A +++ +M ++   P+   ++ LI+GF R+++ +   ++  +M      
Sbjct: 447 NRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCC 506

Query: 555 PDASIVSIVVDLLVKNE 571
           P     + ++D L K E
Sbjct: 507 PTIITYNTLIDGLCKAE 523


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 247/463 (53%), Gaps = 21/463 (4%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ TY  LIN +C+ GR++    A   I      P+  T+N+++ GL    +  +A AL 
Sbjct: 179 NVVTYTTLINGYCRSGRLA---DALALIASMPVAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++    C PN +T+ T I   C+ G    A+ L + M          C P+ V YST++
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYG------CTPDVVIYSTLV 289

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G  ++G VD A  L   M      P+ + YN+ + GLC A  W +  +L +EM+ +   
Sbjct: 290 NGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  TF+++   LC+N  +D A  +L+ M + G RP+A  YNTL+  F   G+++ A +L
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              + SM C  D +S+N  + G C+ +  ++A  L  +M+ +      +T+N L   L +
Sbjct: 407 ---LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +V +A+++F++M + G   D  TY++ I+GL + G +  A+ELF+++    C+ DI  
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFG 520

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN ++ GLC++ R + A EL  ++      PN +T+NI+I  LC  G +D+A ++F  M 
Sbjct: 521 YNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMP 580

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           +  + PD+ T++ LI+GF           LL  M  K   PDA
Sbjct: 581 KYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDA 620



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 226/488 (46%), Gaps = 55/488 (11%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N LIK L A+ R+ +A  +   LKA G   + +++NTL+ G CR G          +   
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGR-------LADAER 167

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                G+    N VTY+T+I+G C+ G +  A AL   M    + PD  TYN+++ GLC 
Sbjct: 168 LLAAAGLSGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCG 224

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           A  W +A+ L  EM+     P+ VTF   +   C+N  +D A +LLD M Q G  P+   
Sbjct: 225 ARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVI 284

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y+TL++GF   G+++ A EL   +  M CK + + YN  + G C  +  E+   L  EMV
Sbjct: 285 YSTLVNGFSEQGRVDDAIEL---LNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMV 341

Query: 375 SK-----------------------------------GIKPTVVTYNTLFLGLFEIHQVE 399
            K                                   G +P  V YNTL     E  +V+
Sbjct: 342 RKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVD 401

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            ALKL + M     + D  ++   + GLC+     +A EL   +    C L    +N LI
Sbjct: 402 DALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILI 458

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           D LC++GR+  A E+F  +P     P++VTY+ +I GL   G ++ A +LF  M      
Sbjct: 459 DSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCK 515

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PD+  ++ ++ G  R        EL+  M  K   P+    +I+++ L +  +  +++  
Sbjct: 516 PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEV 575

Query: 580 FLVQERQG 587
           F    + G
Sbjct: 576 FEQMPKYG 583



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 222/448 (49%), Gaps = 25/448 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  +   M+R H  PP   +F   + +  +N   D       R+   G  P++  Y+ L
Sbjct: 230 DAEALMAEMVRNH-CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTL 288

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N F + GRV         +L     PN   +N+ +KGL    R  +   L  ++    C
Sbjct: 289 VNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDC 345

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN  T++ L + LC+ G    A+ + E+M          C+P+ V Y+T+I    ++G 
Sbjct: 346 LPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYG------CRPDAVIYNTLIYSFSEQGR 399

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  L   M     +PDV+++N+ + GLC A  W++A+ L ++M+ +      +TFN+
Sbjct: 400 VDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNI 456

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LC+N +++ A  + + M + G  P+  TY++L++G    G +  A ELF   +SM 
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELF---QSMP 513

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           CK D   YN ++ G C+    E+A  L   M  K   P  +T+N L   L +   V+ A+
Sbjct: 514 CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAI 573

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++F++M + G   D  TY   I+G  + G + +A  L  T+    C+ D  +YN  + GL
Sbjct: 574 EVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGL 630

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           C++ R K A E+   +      PN VT+
Sbjct: 631 CRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 215/473 (45%), Gaps = 30/473 (6%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRV 112
           P  P   ++N +L  L   + ++   +A  L          PN  T+   I  FC+ G +
Sbjct: 207 PVAPDTYTYNTVLMGLCGARQWE---DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLL 263

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                   R+ +   TP+   +++L+ G   + R+ +A  L   L    C+PN I YN  
Sbjct: 264 DRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIEL---LNGMLCKPNTICYNAA 320

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           + GLC          L  EM   +      C PN  T+S +   LC+ G VD A  +  Q
Sbjct: 321 LKGLCIAQRWEDVGQLIVEMVRKD------CLPNEATFSMLTSCLCQNGLVDCAMEVLEQ 374

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M      PD V YN+LI+        ++A +L   M      P V++FN  +  LC+  +
Sbjct: 375 MHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAER 431

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            D+A  L+  M++        T+N L+D  C  G++N A E+F  M   GC  D V+Y+ 
Sbjct: 432 WDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSS 491

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LING  +   VE A+ L++ M     KP +  YN +  GL    + E A +L   M R  
Sbjct: 492 LINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKD 548

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +  T+   I+ LC+ G +  A+E+F  +       DI  YN LI+G  + GRL  A 
Sbjct: 549 CPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDAR 608

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            L  ++      P+ V+YN  ++GLC   +  +A ++  +M      P+ +TF
Sbjct: 609 RLLSTMS---CKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 174/336 (51%), Gaps = 26/336 (7%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  ++F++L + L +N   D       +++  G  P+   YN LI  F + GRV      
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDAL-- 404

Query: 119 FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             ++L S   +P+  +FN+ +KGL    R  +A  L  ++    C    +T+N LI+ LC
Sbjct: 405 --KLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLC 462

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A+ +FE+M          C P+ VTYS++I+GL ++G V+ A  LF  M    
Sbjct: 463 QNGRVNNAIEVFEQMPKYG------CTPDIVTYSSLINGLSEQGLVESAIELFQSMP--- 513

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+  YN+++ GLC A  W +A  L   M  +   P+ +TFN++++ LC+   +D A 
Sbjct: 514 CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAI 573

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            + + M + G  P+  TYN L++GF   G+++ A  L   + +M CK D VSYN  + G 
Sbjct: 574 EVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRL---LSTMSCKPDAVSYNSALKGL 630

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTY---NTLFL 390
           C+ +  +EA  +  EM+     P  VT+   N LF+
Sbjct: 631 CRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFV 666



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 192/420 (45%), Gaps = 25/420 (5%)

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG-FVD 224
           V+  N LI  LC       A  + + +             + V+++T++ G C++G   D
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAA-------DPVSHNTLVAGYCRDGRLAD 164

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
             + L         N  VVTY +LI+G C +    +A  L   M    V P   T+N ++
Sbjct: 165 AERLLAAAGLSGAAN--VVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVL 219

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
             LC  R+ ++A  L+  MV+    PN  T+ T +  FC  G ++RA +L   M   GC 
Sbjct: 220 MGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCT 279

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D V Y+ L+NG+ +   V++A+ L   M+ K   P  + YN    GL    + E   +L
Sbjct: 280 PDVVIYSTLVNGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQL 336

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             EM R     +  T++     LC+NG +  A+E+   +    C  D   YN LI    +
Sbjct: 337 IVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSE 396

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            GR+  A +L  S+P     P+V+++N  ++GLC   + D A +L + M         +T
Sbjct: 397 QGRVDDALKLLNSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMT 453

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD-----LLVKNEISL-KSLP 578
           F++LI    +    +   E+  +M +    PD    S +++      LV++ I L +S+P
Sbjct: 454 FNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP 513


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 167/611 (27%), Positives = 272/611 (44%), Gaps = 116/611 (18%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V +++  L +  K + +D        +       N  TYN++I+  C+ G V   F 
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG 301

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               ++    +P+A T+ +L+ GL    R+ EA AL  ++   G +PNV+ Y TL++G  
Sbjct: 302 FKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A ++  EM      I    +PN + Y  +I GLCK G + +A  L  +M    
Sbjct: 362 KEGKAAEAFDILNEM------ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD  TY+ L+ G     D + A  L  EM + G+ P+  T+ ++++ LC+N +  EA 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 298 RLLDLMVQRGVRPNA-------------------CT----------------YNTLMDGF 322
            LL+ M+  G++PNA                   C                 YN+L+ G 
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
             +G+I  AEE +  ++  G   D+ +Y+ LI+GYCK + +E+A  L ++M++ G+KP  
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 383 VTYNTLFLGLFEIHQ-----------------------------------VEHALKLFDE 407
            TY  L  G F+ +                                    +E A  +  E
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           ++++G+  D   Y++ I GLCK   + +AV L   +     E  I  YN LIDG C+SG 
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD------ 521
           +  A  +F S+    L+PN VTY  +I G C +G +  A DL+ DM +   APD      
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775

Query: 522 ----------------------------VITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
                                       V  F  L+ GF +     +  +LLH M ++++
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREI 835

Query: 554 MPDASIVSIVV 564
           +P+A  V  V+
Sbjct: 836 VPNAQTVENVI 846



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/528 (29%), Positives = 252/528 (47%), Gaps = 21/528 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-KHYDTRLNATGLFPNLYTYNILINCFC 107
           +A  +   M+  HP PP      ++LAS+ +  +  D R  +     +    ++L++ + 
Sbjct: 133 QANGLLHQMILAHPHPP------LVLASIQRAIQDSDARSPSPSPSHSTAVLDVLVDTYK 186

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF----GCE 163
           K G V         +      P     N L+K L       +A  L  KLK F    G  
Sbjct: 187 KNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLR----ADAMELVWKLKGFMEGAGIP 242

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V TY+T +   C+      A  +FEEM   +      C  N VTY+ +I GLC+ G V
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRD------CAMNEVTYNVMISGLCRSGAV 296

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           ++A     +M D  ++PD  TY +L++GLC      EAK L  EM   G++P+VV +  +
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D   K  K  EA  +L+ M+  GV+PN   Y+ L+ G C +G++ RA +L   M  +G 
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + D  +Y+ L+ G+ ++ + + A  L  EM + GI P   TY  +  GL +  + + A  
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L +EM  +G+  +   Y   I G  K G+I  A E    +       D+  YN LI GL 
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             GR++ A E +  +    LVP+  TY+ +I G C    ++KA  L   M  +   P+  
Sbjct: 537 TVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNAD 596

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           T+  L+ G+ + N+  KV+ +L  M      PD  I  IV+  L ++E
Sbjct: 597 TYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 644



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 235/480 (48%), Gaps = 8/480 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P     N L+    +   + L +   G +  +   P+  T+++ ++  H ++R  +A
Sbjct: 205 GLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEA-HCKARDFDA 263

Query: 151 AA-LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F +++   C  N +TYN +I+GLCR+G    A    EEM      +     P+  T
Sbjct: 264 AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM------VDYGLSPDAFT 317

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y  +++GLCK G + +AKAL  +M    + P+VV Y +L+ G        EA  +  EM+
Sbjct: 318 YGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMI 377

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             GVQP+ + ++ ++  LCK  ++  AS+LL+ M++ G RP+  TY+ LM G       +
Sbjct: 378 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKD 437

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A EL   M + G   +  +Y I+ING C+N E +EA +L  EM+S+G+KP    Y  L 
Sbjct: 438 GAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 497

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
           +G  +   +  A +  + M +  V  D   Y + I GL   G I EA E +  ++     
Sbjct: 498 IGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLV 557

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y+ LI G CK+  L+ A +L   + +  L PN  TY  +++G       +K   +
Sbjct: 558 PDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSI 617

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M  +   PD   + ++I    R         +L ++++  ++PD  I S ++  L K
Sbjct: 618 LQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCK 677



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 217/500 (43%), Gaps = 75/500 (15%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G+ PN   Y+ LI   CKIG++         +++    P+  T++ L++G        
Sbjct: 378 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKD 437

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  L  +++  G  PN  TY  +INGLC+ G +  A NL EEM      I    KPN  
Sbjct: 438 GAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEM------ISEGLKPNAF 491

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+ +I G  KEG +  A      M   N+ PD+  YNSLI GL       EA+  + ++
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G+ P   T++ ++   CK R +++A +LL  M+  G++PNA TY  L++G+      
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDH 611

Query: 329 NRAEELFGSMESMGCKHDDVSYNI-----------------------------------L 353
            +   +  SM   G K D+  Y I                                   L
Sbjct: 612 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 671

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G CK  ++E+A+ L  EM  +G++P +V YN L  G      +  A  +FD +   G+
Sbjct: 672 ISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 731

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN----------------- 456
             +  TYT  IDG CKNG I +A +L++ +       D   YN                 
Sbjct: 732 LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALF 791

Query: 457 -----------------CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
                             L+ G CK GRL+   +L   +    +VPN  T   +I     
Sbjct: 792 LTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGK 851

Query: 500 DGQMDKARDLFLDMEENAAA 519
            G++ +A  +F ++++  A+
Sbjct: 852 AGKLCEAHRVFAELQQKKAS 871



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 63/317 (19%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           + I++ +L+++++ +      T +   GL P+L+ Y+ LI+  CK+  +         + 
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           +    P    +N+LI G      I  A  +F  + A G  PN +TY  LI+G C+ G   
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDIT 752

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A +L+++M                                          D  I PD  
Sbjct: 753 DAFDLYKDML-----------------------------------------DRGIAPDAF 771

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            YN L  G   A D  +A  L  EM ++G    V  F+ ++   CK  ++ E  +LL +M
Sbjct: 772 VYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVM 830

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           + R + PNA T   ++  F   GK+  A  +F  ++             L          
Sbjct: 831 MDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSL---------- 880

Query: 364 EEALSLYREMVSKGIKP 380
                L+ +M++KG+ P
Sbjct: 881 -----LFTDMINKGLIP 892



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 91/224 (40%), Gaps = 24/224 (10%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P +  YN LI+ FC+ G +S     F  IL     PN  T+ +LI G      I +A
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN-GNGEIGVVCKPNTVT 209
             L+  +   G  P+   YN L  G         AL L EEM N G   + +        
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSL-------- 806

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +ST++ G CK G + + + L   M D  I P+  T  ++I     A    EA R+F E+ 
Sbjct: 807 FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            +    S                 D  S L   M+ +G+ P  C
Sbjct: 867 QKKASQS---------------STDRFSLLFTDMINKGLIPPKC 895


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 230/420 (54%), Gaps = 6/420 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN LIN FCK+ R+        R+    F+P+  T+N +I  L +  ++  A  +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             +L +  C+P VITY  LI      G    AL L +EM +         KP+  TY+TI
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG------LKPDMFTYNTI 265

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G+CKEG VD+A  +   ++ +   PDV++YN L+  L +   W E ++L  +M  +  
Sbjct: 266 IRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+VVT+++++  LC++ K++EA  LL LM ++G+ P+A +Y+ L+  FC  G+++ A E
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
              +M S GC  D V+YN ++   CKN + ++AL ++ ++   G  P   +YNT+F  L+
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                  AL +  EM  +G+  D  TY + I  LC+ G + +A EL   +R  +    + 
Sbjct: 446 SSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++ G CK+ R++ A ++  S+      PN  TY ++I+G+   G   +A +L  D+
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 226/459 (49%), Gaps = 7/459 (1%)

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+ G           ++R  + P+      LIKG      + +A  +   L+ FG +P+V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
             YN LING C+      A  + + M + +        P+TVTY+ +I  LC  G +D A
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +  Q+  +N  P V+TY  LI         +EA +L  EM+ +G++P + T+N I+  
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +CK   +D A  ++  +  +G  P+  +YN L+      GK    E+L   M S  C  +
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+Y+ILI   C++ ++EEA++L + M  KG+ P   +Y+ L        +++ A++  +
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M  DG   D   Y T +  LCKNG   +A+E+F  L  + C  +  +YN +   L  SG
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
               A  +   +    + P+ +TYN MI  LC +G +DKA +L +DM      P V+T++
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYN 508

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +++ GF + +      ++L  M      P+ +  +++++
Sbjct: 509 IVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 212/431 (49%), Gaps = 10/431 (2%)

Query: 137 LIKGLHAESR---IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           ++K  H   R    +E+  L   +   G  P+VI    LI G     +   A+ + E + 
Sbjct: 88  MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILE 147

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     +P+   Y+ +I+G CK   +D A  +  +M+ ++ +PD VTYN +I  LC
Sbjct: 148 K-------FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 200

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                + A ++  +++    QP+V+T+ ++++       +DEA +LLD M+ RG++P+  
Sbjct: 201 SRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMF 260

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYNT++ G C  G ++RA E+  ++E  GC+ D +SYNIL+       + EE   L  +M
Sbjct: 261 TYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+   P VVTY+ L   L    ++E A+ L   M+  G+  D  +Y   I   C+ G +
Sbjct: 321 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 380

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A+E   T+    C  DI  YN ++  LCK+G+   A E+F  L      PN  +YN M
Sbjct: 381 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 440

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
              L + G   +A  + L+M  N   PD IT++ +I    R     K  ELL  M+  + 
Sbjct: 441 FSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEF 500

Query: 554 MPDASIVSIVV 564
            P     +IV+
Sbjct: 501 HPSVVTYNIVL 511



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 206/410 (50%), Gaps = 6/410 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL     P+   +N+LI G    +RI +A  +  ++++    P+ +TYN +I  LC  G 
Sbjct: 145 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 204

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +AL + +++ + N      C+P  +TY+ +I+    EG VD+A  L  +M    + PD
Sbjct: 205 LDLALKVLDQLLSDN------CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPD 258

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           + TYN++I G+C     + A  +   +  +G +P V+++N+++  L    K +E  +L+ 
Sbjct: 259 MFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 318

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M      PN  TY+ L+   C  GKI  A  L   M+  G   D  SY+ LI  +C+  
Sbjct: 319 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 378

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A+     M+S G  P +V YNT+   L +  + + AL++F ++   G + ++ +Y 
Sbjct: 379 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 438

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T    L  +G  I A+ +   +     + D   YN +I  LC+ G +  A+EL   +   
Sbjct: 439 TMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSC 498

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
              P+VVTYNI++ G C   +++ A D+   M  N   P+  T+ +LI G
Sbjct: 499 EFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 191/410 (46%), Gaps = 35/410 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+    K    D       R+ +    P+  TYNI+I   C  G++ L    
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L     P   T+  LI+    E  + EA  L  ++ + G +P++ TYNT+I G+C+
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
            G    A  +   +     E  V+                             C PN VT
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I  LC++G +++A  L   MK++ + PD  +Y+ LI   C     + A      M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P +V +N ++  LCKN K D+A  +   + + G  PN+ +YNT+       G   
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  +   M S G   D+++YN +I+  C+   V++A  L  +M S    P+VVTYN + 
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           LG  + H++E A+ + D M  +G   +  TYT  I+G+   GY  EA+EL
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 179/354 (50%), Gaps = 16/354 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+ +       D  L       + GL P+++TYN +I   CK G V   F  
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281

Query: 119 FGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
              + L+ C  P+  ++N L++ L  + +  E   L TK+ +  C+PNV+TY+ LI  LC
Sbjct: 282 IRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 340

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R G    A+NL + M     E G+   P+  +Y  +I   C+EG +D A      M  + 
Sbjct: 341 RDGKIEEAMNLLKLMK----EKGLT--PDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+V YN+++  LC     ++A  +F ++ + G  P+  ++N +   L  +     A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            ++  MV  G+ P+  TYN+++   C  G +++A EL   M S       V+YNI++ G+
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFDEMQR 410
           CK   +E+A+ +   MV  G +P   TY  L  G+ F  ++ E A++L +++ R
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVR 567



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 8/140 (5%)

Query: 65  PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  SS+N + ++L  +       H    + + G+ P+  TYN +I+C C+ G V   F  
Sbjct: 432 PNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFEL 491

Query: 119 FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +RSC F P+  T+N ++ G     RI +A  +   +   GC PN  TY  LI G+ 
Sbjct: 492 LVD-MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIG 550

Query: 178 RTGHTMIALNLFEEMANGNG 197
             G+   A+ L  ++   N 
Sbjct: 551 FAGYRAEAMELANDLVRINA 570


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/437 (34%), Positives = 228/437 (52%), Gaps = 54/437 (12%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY 83
           NFSS L +           ++   ++A   F+ ML M  +PP +  FN +L S AK KHY
Sbjct: 17  NFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPP-IIQFNKILDSFAKMKHY 75

Query: 84  DT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
            T     RL   G+ P+L+T NILINCFC +G+++ GF    +IL+  + P+  T N+LI
Sbjct: 76  STVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 135

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           KGL  + ++ +A     KL A G + N + Y TLING+C+ G T  A+ L +++      
Sbjct: 136 KGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKID----- 190

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG------- 251
            G + KP+ V YSTIID LCK   V +A  LF +M  + I+ DVVTYN+LI+G       
Sbjct: 191 -GRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKL 249

Query: 252 ----------------------------LCHANDWNEAKR-------LFIEMMDQGVQPS 276
                                       LC      EAKR       L  EM D+G    
Sbjct: 250 KEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPAD 309

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V+T++ ++D LCKN  +D A  L + M  +G+RPN  T+  L+DG    G++  A+E+F 
Sbjct: 310 VITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQ 369

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            + + G   +  +YN++ING+CK   +EEAL++  +M   G  P   T+ T+ + LF+  
Sbjct: 370 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 429

Query: 397 QVEHALKLFDEMQRDGV 413
           + + A KL  +M   G+
Sbjct: 430 ENDKAEKLLRQMIARGL 446



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 221/449 (49%), Gaps = 25/449 (5%)

Query: 117 IAFGRILR---SCFTPNAATF--NSLIKGLHAE----SRIMEAAALFTKLKAFGCEPNVI 167
           ++F R LR   S   PN ++F  NS     H++      + +A + F ++      P +I
Sbjct: 1   MSFSRRLRFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPII 60

Query: 168 TYNTLINGLCRTGH-TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            +N +++   +  H + ++L+   E+           +P+  T + +I+  C  G +   
Sbjct: 61  QFNKILDSFAKMKHYSTVSLSHRLELKG--------IQPDLFTLNILINCFCHMGQITFG 112

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
            ++  ++      P  VT N+LI GLC      +A     +++ QG Q + V +  +++ 
Sbjct: 113 FSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLING 172

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +CK      A +LL  +  R  +P+   Y+T++D  C    ++ A  LF  M   G   D
Sbjct: 173 VCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 232

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK--- 403
            V+YN LI G+C   +++EA+ L   MV K I P V TY  L   L +  +V+ A +   
Sbjct: 233 VVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRIS 292

Query: 404 ----LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
               L DEM+  G  AD  TY++ IDGLCKNG++  A+ LF  ++      ++  +  L+
Sbjct: 293 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILL 352

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DGL K GRLK A E+F  L       NV TYN+MI G C  G +++A  +   ME+N   
Sbjct: 353 DGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI 412

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKM 548
           P+  TF+ +I    + +E  K  +LL +M
Sbjct: 413 PNAFTFETIIIALFKKDENDKAEKLLRQM 441



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 191/375 (50%), Gaps = 9/375 (2%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + ++ I+D   K        +L  +++ + I PD+ T N LI+  CH         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 115

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++ +G  PS VT N ++  LC   ++ +A    D ++ +G + N   Y TL++G C 
Sbjct: 116 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCK 175

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G    A +L   ++    K D V Y+ +I+  CK + V EA  L+ EM  KGI   VVT
Sbjct: 176 IGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 235

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA-------V 437
           YNTL  G   + +++ A+ L + M    +  D  TYT  +D LCK G + EA        
Sbjct: 236 YNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVW 295

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           +L   +R      D+  Y+ LIDGLCK+G L  A  LF  +    + PN+ T+ I++ GL
Sbjct: 296 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGL 355

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G++  A+++F D+       +V T++++I+G  +     +   +L KM++   +P+A
Sbjct: 356 WKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNA 415

Query: 558 -SIVSIVVDLLVKNE 571
            +  +I++ L  K+E
Sbjct: 416 FTFETIIIALFKKDE 430



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 1/242 (0%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A   F  M  M      + +N +++ + K K     +SL   +  KGI+P + T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYS-TVSLSHRLELKGIQPDLFTLNI 98

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L      + Q+     +  ++ + G    T T  T I GLC  G + +A+     L    
Sbjct: 99  LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 158

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            +L+   Y  LI+G+CK G  + A +L   +   +  P+VV Y+ +I  LC    + +A 
Sbjct: 159 FQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAY 218

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            LF +M     + DV+T++ LI+GF  + +  +   LL+ M  K + PD    +I+VD L
Sbjct: 219 GLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDAL 278

Query: 568 VK 569
            K
Sbjct: 279 CK 280



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 10/202 (4%)

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
            I  V+ A+  F+ M           +   +D   K  +    V L   L +   + D+ 
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY-STVSLSHRLELKGIQPDLF 94

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
             N LI+  C  G++ F + +   +      P+ VT N +I+GLC  GQ+ KA      +
Sbjct: 95  TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 154

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
                  + + +  LI+G  +I +     +LL K+  +   PD  + S ++D L K +  
Sbjct: 155 LAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQ-- 212

Query: 574 LKSLPSFLVQERQGEVGESNVK 595
                  LV E  G   E  VK
Sbjct: 213 -------LVSEAYGLFSEMTVK 227


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/458 (33%), Positives = 232/458 (50%), Gaps = 6/458 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +N L++ +CK+G +   F    R+       +   +NSL+ GL     +  A  +   +K
Sbjct: 177 WNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G EPNV+TY   I   CR      A +L+EEM       GV+  P+ VT S ++ GLC
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK----GVL--PDVVTLSALVGGLC 290

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+G   +A ALF +M+     P+ VTY  LI  L  A   NE+  L  E++ +GV   ++
Sbjct: 291 KDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLI 350

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +  +MD LCK  K+DEA  +    +     PN  TY  L+D  C  G ++ AE++   M
Sbjct: 351 MYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEM 410

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           E      + V+++ +ING  K   V +A    REM  +GI P VVTY T+  G F+    
Sbjct: 411 EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQ 470

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E AL ++ EM  +GV  +     + ++GL KNG I +A  LFR +      LD   Y  L
Sbjct: 471 EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTL 530

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDGL K+G L  A+++   L    L+P+ V YN+ I  LC  G+  +A     +M+    
Sbjct: 531 IDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGL 590

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            PD +T++ +I    R  + +K  +LL+ MK   + P+
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 262/518 (50%), Gaps = 14/518 (2%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  +N L+A L +    D        +   G+ PN+ TY + I  +C+   V   F  + 
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++R    P+  T ++L+ GL  + R  EA ALF +++  G  PN +TY  LI+ L +  
Sbjct: 269 EMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQ 328

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               +L+L  E+ +     GVV   + + Y+ ++D LCKEG +D+AK +F     +N  P
Sbjct: 329 RGNESLSLLGEVVSR----GVVM--DLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTP 382

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           + VTY  LI  LC A + + A+++  EM ++ + P+VVTF+ I++ L K   + +A+  +
Sbjct: 383 NGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYM 442

Query: 301 DLMVQRGVRPNACTYNTLMDG-FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
             M +RG+ PN  TY T++DG F  +G+   A +++  M   G + +    + L+NG  K
Sbjct: 443 REMKERGIDPNVVTYGTVIDGSFKCLGQ-EAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N ++E+A +L+REM  +G+    V Y TL  GLF+   +  A K+  E+    +  D   
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y  FI+ LC  G   EA      ++    + D   YN +I    + G+   A +L   + 
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + PN++TY+ +I GL   G ++KA+ L  +M  +  +P  +T   ++    +     
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSD 681

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            + E+   M    +  D ++ + +V +L  N ++ K++
Sbjct: 682 LILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 247/549 (44%), Gaps = 68/549 (12%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN  TY +LI+  CK G V         +     +PN  TF+S+I GL     + +A   
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------ANG--- 195
             ++K  G +PNV+TY T+I+G  +      AL+++ EM                NG   
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501

Query: 196 NGEI-------------GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           NG+I             GV+   + V Y+T+IDGL K G +  A  +  ++ ++N+ PD 
Sbjct: 502 NGKIEKAEALFREMNERGVLL--DHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN  I+ LC      EA+    EM   G++P  VT+N ++    +  K  +A +LL+ 
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--------------CKH--- 345
           M +  ++PN  TY+TL+ G    G + +A+ L   M S G              C     
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 346 ------------------DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
                             D   YN L+   C N    +A+ +  EM  +GI P  +T+N 
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L LG F+   +++A   +D+M   G++ +  T+ T + GL   G I E+  +   ++   
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E     Y+ L+ G  K      A  L+C +     +P V TYN +I      G M +A+
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAK 859

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +LF +M+     P   T+D+L+ G+ ++   ++V + L  MKEK   P    +S +    
Sbjct: 860 ELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAF 919

Query: 568 VKNEISLKS 576
            K  +S ++
Sbjct: 920 SKPGMSWEA 928



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 237/481 (49%), Gaps = 40/481 (8%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +LRS  + +  ++N ++ G  +E   +   AL  ++   G   + +T NT++ GLCR G 
Sbjct: 94  LLRSSESVDTVSYNVVMSGF-SEQGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGR 152

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A  L E M  G G  G+    + V +++++DG CK G ++ A A+  +MK + +  D
Sbjct: 153 VDRAAALAEVMVRGGGIGGL----DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVD 208

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VV YNSL+ GLC A + + A+ +   M   GV+P+VVT+ + + E C+   +D+A  L +
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYE 268

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            MV++GV P+  T + L+ G C  G+ + A  LF  ME +G   + V+Y +LI+   K +
Sbjct: 269 EMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQ 328

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
              E+LSL  E+VS+G+   ++ Y  L   L +  +++ A  +F     D    +  TYT
Sbjct: 329 RGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYT 388

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             ID LCK G +  A ++   +       ++  ++ +I+GL K G +  A +    +   
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448

Query: 482 VLVPNVVTYNIMIQG-----------------LC------------------NDGQMDKA 506
            + PNVVTY  +I G                 LC                   +G+++KA
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKA 508

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF +M E     D + +  LI G  +        ++  ++ EK ++PDA + ++ ++ 
Sbjct: 509 EALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINC 568

Query: 567 L 567
           L
Sbjct: 569 L 569



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 172/378 (45%), Gaps = 41/378 (10%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +N  G+  +   Y  LI+   K G +   F     +      P+A  +N  I  L    +
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGK 574

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA +   ++++ G +P+ +TYNT+I    R G T  AL L   M   +       KPN
Sbjct: 575 SKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS------IKPN 628

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP-------------------------- 240
            +TYST+I GL + G V+KAK L  +M     +P                          
Sbjct: 629 LITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHE 688

Query: 241 ---------DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
                    D+  YN+L+  LC+     +A  +  EM  +G+ P  +TFN ++    K+ 
Sbjct: 689 WMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSG 748

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +D A    D M+  G+ PN  T+NTL+ G    G+I  ++ +   M+  G +  +++Y+
Sbjct: 749 HLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYD 808

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL+ GY K     EA+ LY EMV KG  P V TYN L     ++  +  A +LF+EMQ  
Sbjct: 809 ILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNR 868

Query: 412 GVAADTRTYTTFIDGLCK 429
           GV   + TY   + G  K
Sbjct: 869 GVLPTSCTYDILVSGWSK 886



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 12/385 (3%)

Query: 65  PPVSSFNIL---LASLAKNKHYDT---RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    +N+    L  L K+K  ++    + +TGL P+  TYN +I    + G+ +     
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKL 616

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + RS   PN  T+++LI GL     + +A  L  ++ + G  P  +T+  ++    +
Sbjct: 617 LNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQ 676

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              + + L + E M N       +C   TV Y+T++  LC  G   KA  +  +M    I
Sbjct: 677 GRRSDLILEIHEWMMNAG-----LCADITV-YNTLVRVLCYNGMTRKAMVVLEEMSGRGI 730

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +T+N+LI G   +   + A   + +M+  G+ P+V TFN ++  L    ++ E+  
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L+ M +RG+ P+  TY+ L+ G+        A  L+  M   G      +YN LI+ + 
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFS 850

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   + +A  L+ EM ++G+ PT  TY+ L  G  ++       K   +M+  G +    
Sbjct: 851 KVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKG 910

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTL 443
           T ++      K G   EA  L + L
Sbjct: 911 TLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 3/234 (1%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D VSYN++++G+ +   +    +L  EM  +G+    VT NT+ +GL    +V+ A  L 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 406 DEMQRDGVAA--DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           + M R G     D   + + +DG CK G +  A  +   ++     +D+  YN L+ GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++G +  A ++  ++    + PNVVTY + I   C    +D A  L+ +M      PDV+
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           T   L+ G  +    S+   L  +M++    P+     +++D L K +   +SL
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 7/212 (3%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + +  AL+L R   S       V+YN +  G  E   +     L  EM + GV  D  T 
Sbjct: 86  RSLRPALALLRSSES----VDTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTV 140

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKC--ELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            T + GLC++G +  A  L   +        LD+  +N L+DG CK G ++ A+ +   +
Sbjct: 141 NTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERM 200

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  +VV YN ++ GLC  G++D ARD+   M+ +   P+V+T+ M I  + R N  
Sbjct: 201 KAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAV 260

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                L  +M  K V+PD   +S +V  L K+
Sbjct: 261 DDAFSLYEEMVRKGVLPDVVTLSALVGGLCKD 292


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 254/511 (49%), Gaps = 12/511 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L K+ + D       ++   G+   L TY++LIN   K+ + +     
Sbjct: 279 PNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 338

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               L   FTPN   +N+LI G      + +A  +   + + G  PN +T N++I G C+
Sbjct: 339 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 398

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  + EEM +    I      N   ++TII  LC     + A     +M   N+
Sbjct: 399 IGQMEQAECILEEMLSRGFSI------NPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+     +L+ GLC     ++A  L+  ++++G   ++VT N ++  LCK   M EA R
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M++RG   +  TYNTL+ G C  GK+    +L G M   G + D  +YN+LI+G C
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC 572

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  +++EA++L+ E  S+ + P V TY  +  G  +  ++E   KLF E+    +  ++ 
Sbjct: 573 RIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSV 632

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y T I   C+NG  +EA +L   +R          Y+ LI G+C  GR++ A  L   +
Sbjct: 633 VYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEM 692

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L+PNVV Y  +I G C  GQMDK  ++  +M      P+ IT+ ++I G+ +  + 
Sbjct: 693 RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDM 752

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               +LLH+M  K ++PD    +++ +   K
Sbjct: 753 KTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/541 (30%), Positives = 254/541 (46%), Gaps = 46/541 (8%)

Query: 65  PPVSSFNILLASLAK-----NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P V +   LL+SL K       ++       G+ P++Y ++  IN FCK G+V      F
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLF 269

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             + +   +PN  T+N+LI GL     + EA     K+   G    +ITY+ LINGL + 
Sbjct: 270 FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKL 329

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                A ++ +E      E G    PN V Y+T+IDG CK G +  A  +   M  + IN
Sbjct: 330 EKFNEANSVLKETL----EKGFT--PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 383

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+ VT NS+I G C      +A+ +  EM+ +G   +   F  I+  LC N + + A R 
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 443

Query: 300 LDLMVQRGVRP-----------------------------------NACTYNTLMDGFCL 324
           L  M+ R +RP                                   N  T N L+ G C 
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G +  A  L   M   G   D ++YN LI+G CK  +VEE   L  EMV +GI+P   T
Sbjct: 504 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L  G+  I +++ A+ L++E +   +  +  TY   IDG CK   I E  +LF  L 
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               EL+   YN LI   C++G    A++L   +    + P   TY+ +I G+CN G+M+
Sbjct: 624 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 683

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+ L  +M +    P+V+ +  LI G+ ++ +  KV  +L +M    + P+    ++++
Sbjct: 684 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 743

Query: 565 D 565
           D
Sbjct: 744 D 744



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 230/454 (50%), Gaps = 11/454 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G+ PN  T N +I  FCKIG++         +L   F+ N   F ++I  L   SR  
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL-FEEMANGNGEIGVVCKPNT 207
            A     ++      PN     TL+ GLC+ G    A+ L F  +  G G        N 
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA-------NL 491

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VT + +I GLCK G + +A  L  +M +     D +TYN+LI G C      E  +L  E
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ QG++P   T+N+++  +C+  K+DEA  L +    R + PN  TY  ++DG+C   K
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I   E+LF  + +   + + V YN LI  YC+N    EA  L+ +M SKGI PT  TY++
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G+  I ++E A  L DEM+++G+  +   YT  I G CK G + + V + + +    
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   Y  +IDG  KSG +K A +L   +    +VP+ VTYN++  G C +G++++  
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +   M +     D IT+  L+HG+    +PS +
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHGW---QQPSAL 822



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 252/476 (52%), Gaps = 14/476 (2%)

Query: 100 NILINCFCKIGRVSLGF---IAFGRIL--RSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++LI+ +C   R ++GF   I   R L  +  F P   T   L+  L   + + ++  +F
Sbjct: 178 DLLIHVYCTQFR-NVGFRNAIGVFRFLANKGVF-PTVKTCTFLLSSLVKANELEKSYWVF 235

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             ++  G  P+V  ++T IN  C+ G    A+ LF +M     ++GV   PN VTY+ +I
Sbjct: 236 ETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME----KLGV--SPNVVTYNNLI 288

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLCK G +D+A     +M  + +N  ++TY+ LI+GL     +NEA  +  E +++G  
Sbjct: 289 HGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFT 348

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+ V +N ++D  CK   + +A R+   MV +G+ PN+ T N+++ GFC +G++ +AE +
Sbjct: 349 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECI 408

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M S G   +  ++  +I+  C N   E AL   REM+ + ++P      TL  GL +
Sbjct: 409 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 468

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +   A++L+  +   G  A+  T    I GLCK G + EAV L + +      LD   
Sbjct: 469 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 528

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN LI G CK G+++  ++L   +    + P+  TYN++I G+C  G++D+A +L+ + +
Sbjct: 529 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                P+V T+ ++I G+ + ++  +  +L  ++  + +  ++ + + ++    +N
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 644



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 1/136 (0%)

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+ +FR L        ++    L+  L K+  L+ ++ +F ++  GV  P+V  ++  I 
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGV-SPDVYLFSTAIN 254

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             C  G+++ A  LF DME+   +P+V+T++ LIHG  +     +      KM +  V  
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 556 DASIVSIVVDLLVKNE 571
                S++++ L+K E
Sbjct: 315 TLITYSVLINGLMKLE 330



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 7/143 (4%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGL 92
            G  N+    +A C+ D M R     P V  +  L+    K    D  +N      +  +
Sbjct: 674 HGMCNIGRMEDAKCLIDEM-RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PN  TY ++I+ + K G +         ++     P+  T+N L  G   E +I E   
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792

Query: 153 LFTKLKAFGCEPNVITYNTLING 175
           +   +   G   + ITY TL++G
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHG 815


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/527 (30%), Positives = 251/527 (47%), Gaps = 41/527 (7%)

Query: 69  SFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           SF+ LL  L K          Y   LN+ G+ PNL+T+N +I   C  G+V    +  G 
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNS-GIRPNLFTFNAMIKILCNKGKVQEAELIMGH 227

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           I      P+  T+ SLI G      +  A  +F ++   GC+PN +TY+ LINGLC  G 
Sbjct: 228 IFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGR 287

Query: 182 TMIALNLFEEMANGNGE-------IGVV----------------------CKPNTVTYST 212
              A+++ EEM +   E       I +V                      C PN  TY+ 
Sbjct: 288 LEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTA 347

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I GL ++G  + A  ++ +M  + + P  VTY++LI+ L     +  A  +F  M+   
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHD 407

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P+  T+NVI+   C    + +A+ + D M++ G  PN  TYN ++  +   G +N A 
Sbjct: 408 SLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAM 467

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   M+  G K D  +Y  LI+G+ +  ++E A SL+ EMV  GI P VVTYN +  G 
Sbjct: 468 RLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGY 527

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
             + +V+ AL LF +M   G    + TY   I G  K   I EA      +       ++
Sbjct: 528 LTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNV 587

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y   IDGLCK+GR   A+++F  +      PN+ TY+ +I GLC +GQ + A  L   
Sbjct: 588 ITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL-- 645

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
             ++   P+V T+  L+ G        + ++L+  MK+K + P   I
Sbjct: 646 --DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEI 690



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 155/476 (32%), Positives = 238/476 (50%), Gaps = 45/476 (9%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI--- 147
           G  P+ +TY  LI   CK G + L F  F R+++    PN+ T+++LI GL +E R+   
Sbjct: 232 GACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEA 291

Query: 148 --------------------------------MEAAALFTKLKAFGCEPNVITYNTLING 175
                                            EA  L  K+K  GC PNV TY  LI+G
Sbjct: 292 MDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISG 351

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L R G   +A+ ++ +M       G+V  P  VTYS +I+ L  EG  + A  +F  M  
Sbjct: 352 LSRDGKFEVAIGVYHKMLAD----GLV--PTAVTYSALINQLYVEGRFETALTIFEWMLS 405

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
            +  P+  TYN +I G C      +A  +F +M+  G  P+V+T+N+I+    K   M+ 
Sbjct: 406 HDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNN 465

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A RLL++M   G++ +  TY  L+ GF   GK+  A  LF  M   G   + V+YN +IN
Sbjct: 466 AMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIIN 525

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           GY    +V++AL+L+ +MV  G  P+  TYN +  G  + +++  A     +M + G+  
Sbjct: 526 GYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLP 585

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TYT+FIDGLCKNG    A ++F  ++      ++  Y+ LIDGLC+ G+ + A  L 
Sbjct: 586 NVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL- 644

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L  G   PNV TY  +++GLC  G+  +A  L   M++    P    +  L+ G
Sbjct: 645 --LDDGC-EPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVG 697



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 225/466 (48%), Gaps = 10/466 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G  PN+ TY  LI+   + G+  +    + ++L     P A T+++LI  L+ E 
Sbjct: 332 KMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEG 391

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R   A  +F  + +    PN  TYN +I G C  G+   A  +F++M            P
Sbjct: 392 RFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS------P 445

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N +TY+ II    K+G+++ A  L   MK   +  D  TY +LI G         A  LF
Sbjct: 446 NVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLF 505

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM++ G+ P+VVT+N I++      K+D+A  L   MV+ G  P++ TYN ++ GF   
Sbjct: 506 NEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKT 565

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +I+ AE   G M   G   + ++Y   I+G CKN     A  ++ EM  +   P + TY
Sbjct: 566 NRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTY 625

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L  GL +  Q E A +L D    DG   +  TYTT + GLC  G   EA +L  +++ 
Sbjct: 626 SSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKK 681

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              +   + Y  L+ G CK+  ++ A ++F S+      P +  Y  +I  LC      K
Sbjct: 682 KGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQK 741

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           A+ +F  M +     D + + +L+ G ++  E     ELLH M+ +
Sbjct: 742 AQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 208/410 (50%), Gaps = 6/410 (1%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  PN+ T+N +I  LC  G    A     E+  G+      C P+T TY+++I G CK 
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEA-----ELIMGHIFHYGAC-PDTFTYTSLIIGHCKN 250

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +D A  +F +M  +  +P+ VTY++LI+GLC      EA  +  EM+D+G++P+V  +
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            + +  LC   +  EA +LL  M +RG  PN  TY  L+ G    GK   A  ++  M +
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G     V+Y+ LIN        E AL+++  M+S    P   TYN +  G   I  ++ 
Sbjct: 371 DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQK 430

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  +FD+M + G + +  TY   I    K GY+  A+ L   ++    +LD   Y  LI 
Sbjct: 431 ATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G  + G+L+ A+ LF  +    + PNVVTYN +I G     ++D A  LF  M E+   P
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              T++M+I GF + N  S+      KM ++ ++P+    +  +D L KN
Sbjct: 551 SSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 199/417 (47%), Gaps = 16/417 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +++ L+  L     ++T L       +    PN  TYN++I  FC IG +      
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAI 434

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++L++  +PN  T+N +I     +  +  A  L   +K  G + +  TY  LI+G  R
Sbjct: 435 FDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSR 494

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A +LF EM     E G+   PN VTY+ II+G      VD A ALF +M +   
Sbjct: 495 GGKLEHAFSLFNEMV----EHGI--SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P   TYN +I G    N  +EA+    +M+ QG+ P+V+T+   +D LCKN +   A +
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFK 608

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M +R   PN CTY++L+DG C  G+   AE L       GC+ +  +Y  L+ G C
Sbjct: 609 IFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLC 664

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 EA  L   M  KG++P+   Y  L +G  +  +VE ALK+FD M   G      
Sbjct: 665 GKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLS 724

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
            Y   I  LCK  +  +A  +F+T+       D   +  L+DGL K G    + EL 
Sbjct: 725 DYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 205/412 (49%), Gaps = 19/412 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNIL 102
           A  IF++ML  H S P   ++N+++       +       +D  L A G  PN+ TYNI+
Sbjct: 396 ALTIFEWMLS-HDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA-GPSPNVITYNII 453

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ + K G ++        +  +    +  T+ +LI G     ++  A +LF ++   G 
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PNV+TYN +ING         AL LF +M     E G V  P++ TY+ +I G  K   
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMV----ESGNV--PSSGTYNMMISGFSKTNR 567

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           + +A+    +M  + + P+V+TY S I GLC     + A ++F EM  +   P++ T++ 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LC+  + ++A RLLD     G  PN  TY TL+ G C  G+   A++L  SM+  G
Sbjct: 628 LIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            +  +  Y  L+ G CKN EVE AL ++  MV+ G +P +  Y  L   L + +  + A 
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            +F  M +    +D   +T  +DGL K G    ++EL   +    C L+ Q 
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 2/296 (0%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDL-MVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           ++ +F+ ++ +L K   MD   R + + M+  G+RPN  T+N ++   C  GK+  AE +
Sbjct: 166 TLYSFSTLLIQLGK-FDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELI 224

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
            G +   G   D  +Y  LI G+CKN  ++ A  ++  MV  G  P  VTY+ L  GL  
Sbjct: 225 MGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCS 284

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             ++E A+ + +EM   G+      YT  I  LC  G   EAV+L   ++   C  ++Q 
Sbjct: 285 EGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQT 344

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y  LI GL + G+ + A  ++  +    LVP  VTY+ +I  L  +G+ + A  +F  M 
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWML 404

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            + + P+  T++++I GF  I    K   +  +M +    P+    +I++ +  K 
Sbjct: 405 SHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQ 460


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 261/523 (49%), Gaps = 15/523 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILI 103
           ++ +FD M     +P  V  F+ ++ +       D       ++   G+ PN+ TYN +I
Sbjct: 181 SYQVFDIMCHCGVTPD-VYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNII 239

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK GR+   F    ++ +    P+  T+  LI GL    R  EA  +  ++   G  
Sbjct: 240 HGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYA 299

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           PN + YNTLI+G CR G+   AL + ++M +NG         PN+VT +++I G CK   
Sbjct: 300 PNNVVYNTLIDGYCRIGNISTALQIRDDMISNG-------ISPNSVTCNSLIQGYCKSNQ 352

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++ A+ L  +M       +  T+ S+IH LC    ++ A    +EM+ +  +P+     +
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTL 412

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LC+N K  EA  L   ++++G   N  T N L+ G C  G    A +L   M   G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D +SYN LI   CK  +VEE   L  EMV +GI+P + TYN L  GL  + ++E A 
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L+ E +++G   D  TY   IDG CK   + E  +LF+ +  +K E +   Y  LI   
Sbjct: 533 GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY 592

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C++G ++ A+ L   +    +     TY+ +I GL N G +D A  L  +M +   +P+V
Sbjct: 593 CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           + +  LI G+ ++ +  KV+ +L +M    V P+    +I+++
Sbjct: 653 VCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 256/507 (50%), Gaps = 16/507 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EAF   + M +    P  V+ + +L+  L K + +D        ++  G  PN   YN 
Sbjct: 249 DEAFQFKEKMEKERVKPSLVT-YGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNT 307

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ +C+IG +S        ++ +  +PN+ T NSLI+G    +++  A  L  ++   G
Sbjct: 308 LIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              N  T+ ++I+ LC       AL    EM   N       KPN    + ++ GLC+ G
Sbjct: 368 GVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN------FKPNDGLLTLLVSGLCQNG 421

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              +A  L+ ++ ++    + VT N+LIHGLC A    EA +L  EM+++G+    +++N
Sbjct: 422 KQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYN 481

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   CK  K++E  +L + MV+RG++P+  TYN L+ G C MGKI  A  L+   +  
Sbjct: 482 TLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKN 541

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  +Y I+I+GYCK   VEE   L++EMV+  I+   V Y TL     E   +  A
Sbjct: 542 GNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREA 601

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L D+M+  G+   + TY++ I GL   G +  A +L   +R      ++  Y  LI G
Sbjct: 602 FRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGG 661

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            CK G++     +   +    + PN +TY IMI G C  G M  A  L  +M +    PD
Sbjct: 662 YCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPD 721

Query: 522 VITFDMLIHGFI---RINEPSKVNELL 545
            +T++ L +GF    ++ E  KV +L+
Sbjct: 722 AVTYNALTNGFCKEGKMEEALKVCDLM 748



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 176/606 (29%), Positives = 273/606 (45%), Gaps = 64/606 (10%)

Query: 4   ESCCNRSFSFASAPISAFRSNFS-SLLVHFRDLTTREGD-------INVITPNEAFCIFD 55
           +S  N  FS  S P  +F S+ S  LL+H   L+  E D        N + P  AF  F 
Sbjct: 57  QSLINSVFSILSNP--SFDSSKSKQLLLH---LSPHEFDQCFLAIGSNNVNPRTAFNFFH 111

Query: 56  YMLRMHPSPP-PVSSFNILLASLAKN-KHYD--------TRLNATGLFPNLYTYNILINC 105
           +       P   V+  ++L+   +   KH          + L   GLFP+L T N L++ 
Sbjct: 112 FASETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSS 171

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
             K   V + +  F  +     TP+   F++++       R+ +A  LF K++  G  PN
Sbjct: 172 LVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPN 231

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V+TYN +I+GLC+ G    A    E+M           KP+ VTY  +I+GL K    D+
Sbjct: 232 VVTYNNIIHGLCKNGRLDEAFQFKEKMEKER------VKPSLVTYGVLINGLVKLERFDE 285

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  +  +M D    P+ V YN+LI G C   + + A ++  +M+  G+ P+ VT N ++ 
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345

Query: 286 ELCKNRKMDEASRLLDLMVQ-----------------------------------RGVRP 310
             CK+ +M+ A  LL+ M+                                    R  +P
Sbjct: 346 GYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKP 405

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N      L+ G C  GK + A EL+  +   G   + V+ N LI+G C+    EEA  L 
Sbjct: 406 NDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLL 465

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           +EM+ +G+    ++YNTL L   +  +VE   KL +EM R G+  D  TY   + GLC  
Sbjct: 466 KEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNM 525

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I EA  L+   +      D   Y  +IDG CK+ R++   +LF  +    +  N V Y
Sbjct: 526 GKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVY 585

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             +I+  C +G M +A  L  DM          T+  LIHG   I      N+LL +M++
Sbjct: 586 GTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRK 645

Query: 551 KKVMPD 556
           + + P+
Sbjct: 646 EGLSPN 651



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 231/455 (50%), Gaps = 6/455 (1%)

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F  F  +      P+  T N L+  L   + +  +  +F  +   G  P+V  ++T++N 
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C  G    A+ LF +M     ++GV   PN VTY+ II GLCK G +D+A     +M+ 
Sbjct: 207 FCTGGRVDDAIELFRKME----KVGVA--PNVVTYNNIIHGLCKNGRLDEAFQFKEKMEK 260

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           E + P +VTY  LI+GL     ++EA  +  EM D+G  P+ V +N ++D  C+   +  
Sbjct: 261 ERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIST 320

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A ++ D M+  G+ PN+ T N+L+ G+C   ++  AE L   M + G   +  ++  +I+
Sbjct: 321 ALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIH 380

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             C     + AL    EM+ +  KP       L  GL +  +   A++L+  +   G AA
Sbjct: 381 RLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAA 440

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +T T    I GLC+ G   EA +L + +      LD  +YN LI   CK G+++  ++L 
Sbjct: 441 NTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + P++ TYN+++ GLCN G++++A  L+ + ++N   PD  T+ ++I G+ + 
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           N   +  +L  +M   K+  +A +   ++    +N
Sbjct: 561 NRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCEN 595



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 146/270 (54%), Gaps = 8/270 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++YTYN+L++  C +G++      +    ++   P+A T+  +I G    +R+ E 
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT-VT 209
             LF ++     E N + Y TLI   C  G+   A  L ++M +     G+   P T  T
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR----GI---PQTSAT 619

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS++I GL   G VD A  L  +M+ E ++P+VV Y +LI G C     ++   +  EM 
Sbjct: 620 YSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMS 679

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
              V P+ +T+ ++++  CK   M  A++LL+ M Q+G+ P+A TYN L +GFC  GK+ 
Sbjct: 680 INNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKME 739

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCK 359
            A ++   M + G   DD++Y  LI+G+ K
Sbjct: 740 EALKVCDLMSTGGISLDDITYTTLIDGWHK 769


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/469 (33%), Positives = 238/469 (50%), Gaps = 21/469 (4%)

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
           +G   F  + R+   PN  T+N++I G     R  EA      +   G EPN+IT+N +I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           NGLCR G       +  EM+      G V  P+ VTY+T+++G CKEG   +A  L  +M
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRK----GYV--PDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               ++P+VVTY SLI+ +C A + N A   F +M  +G+ P+  T+  I++   +   +
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           DEA R+L+ M + G  P+  TYN L++G C++G++  A  L   M   G   D VSY+ +
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G+ +N+E++ A  +  EM+ K + P  VTY++L  GL E  ++  A  +F EM    +
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  TYTT I+  CK G + +A+ L   +       D   YN LI+GL K  R K A  
Sbjct: 295 PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354

Query: 474 LFCSLPHGVLVPNVVTYNIMIQ---------------GLCNDGQMDKARDLFLDMEENAA 518
           L   L +   +P+ VTYN +I+               G C  G MD+A  +F  M     
Sbjct: 355 LLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNH 414

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            P+   ++++IHG  RI    K  +L  +M     +P    V  +V  L
Sbjct: 415 KPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKAL 463



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 253/508 (49%), Gaps = 32/508 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++    K K  D        +   GL PNL T+N++IN  C+ GR+      
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + R  + P+  T+N+L+ G   E    +A  L  ++   G  PNV+TY +LIN +C+
Sbjct: 76  LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A+  F++M      +  +C PN  TY+TII+G  ++G +D+A  +  +M     
Sbjct: 136 AGNLNRAMEFFDQM-----HVRGLC-PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGF 189

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P +VTYN+LI+G C      EA  L  +M+ +GV P VV+++ I+    +N+++D A +
Sbjct: 190 IPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQ 249

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M+ + V P+A TY++L+ G C   ++  A ++F  M ++    D+ +Y  LIN YC
Sbjct: 250 MKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYC 309

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  ++ +AL L+ EM+ KG  P  VTYN L  GL +  + + A +L  ++  D       
Sbjct: 310 KEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAV 369

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I+  C                     ++ ++   L+ G C  G +  A ++F S+
Sbjct: 370 TYNTLIENCCN--------------------IEFKSAVALVKGFCMKGLMDEADQVFESM 409

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            +    PN   YN++I G C  G + KA  L+ +M      P  +T   L+         
Sbjct: 410 INKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMD 469

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDL 566
            ++NE++  +     + DA +  ++V++
Sbjct: 470 GELNEVIGDILRSCKLTDAELSKVLVEI 497



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 163/307 (53%)

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           R F EM   G  P+VVT+N ++D  CK ++ DEA   L  M  +G+ PN  T+N +++G 
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G++    E+   M   G   D+V+YN L+NGYCK     +AL L+ EMV  G+ P V
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY +L   + +   +  A++ FD+M   G+  + RTYTT I+G  + G + EA  +   
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +        I  YN LI+G C  GR++ A  L   +    ++P+VV+Y+ +I G   + +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D+A  + ++M   +  PD +T+  LI G       ++  ++  +M   K+ PD    + 
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 563 VVDLLVK 569
           +++   K
Sbjct: 304 LINAYCK 310



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 185/345 (53%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
            F +M+     P+VVTYN++I G C     +EA      M  +G++P+++TFN+I++ LC
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           ++ ++ E S +L  M ++G  P+  TYNTL++G+C  G  ++A  L   M   G   + V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y  LIN  CK   +  A+  + +M  +G+ P   TY T+  G  +   ++ A ++ +EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            R G      TY   I+G C  G + EA+ L + +       D+ +Y+ +I G  ++  L
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+++   +    ++P+ VTY+ +IQGLC   ++ +A D+F +M      PD  T+  L
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
           I+ + +  + +K   L  +M +K  +PDA   +++++ L K   S
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARS 349


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/590 (28%), Positives = 273/590 (46%), Gaps = 83/590 (14%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIG 110
           Y+L    + P + + N  L+SL K   ++      R+ + G  P+++++  +IN  CK G
Sbjct: 175 YLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCKGG 234

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           ++      F ++ +   +PN  T+N +I GL    R+  A  L  K+   G +PN+ TY 
Sbjct: 235 KMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYG 294

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGE-IGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
            LINGL       I LN F+++ +   E IG    PN V ++ +IDG CK G ++ A  +
Sbjct: 295 ALINGL-------IKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI 347

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV---------------- 273
              M  +NI P  VT  SL+ G C ++    A+    E++  G+                
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407

Query: 274 -------------------QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                              +PS +   +++  LCK+ K  EA+ L   ++++G   +  T
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 467

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
            N L+ G C  GK+  A  +   M   G   D ++YN LI G+C   +VE    L  EM 
Sbjct: 468 SNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMT 527

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            +GI+P + TYN L  GL  + +++ A+KL+DE +  G+ ++  TY   ++G CK   I 
Sbjct: 528 KRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 587

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---------------FCSLP 479
           +   LF  L   K EL+   YN +I   C++G +  A +L               + SL 
Sbjct: 588 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 647

Query: 480 HGV--------------------LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           HGV                     VPNVV Y  +I G C  GQMD A   +L+M      
Sbjct: 648 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 707

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           P+  T+ ++I G+ ++    K N LL KMKE  ++PD    +++ +   K
Sbjct: 708 PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCK 757



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 249/508 (49%), Gaps = 35/508 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++  L +N   D       ++   G+ PNL TY  LIN   K+         
Sbjct: 253 PNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHI 312

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++ + F PN   FN+LI G      I  A  +   + +    P  +T  +L+ G C+
Sbjct: 313 LDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 372

Query: 179 TGHTMIALNLFEEMA---------NGNGEIGVVCK--------------------PNTVT 209
           +     A N  EE+          N    +  +CK                    P+ + 
Sbjct: 373 SDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLL 432

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            + ++ GLCK+G   +A  L+ ++ ++      VT N+LIHGLC A    EA R+  EM+
Sbjct: 433 LTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML 492

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           ++G+    +T+N ++   C   K++   RL + M +RG++P+  TYN L+ G C +GK++
Sbjct: 493 ERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLD 552

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A +L+   ++ G   +  +Y I++ GYCK   +E+  +L+ E++SK ++   + YN + 
Sbjct: 553 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 612

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
               +   V  AL+L + M+  G+  +  TY++ I G+C  G + +A  L   +R     
Sbjct: 613 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFV 672

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y  LI G CK G++  A   +  +    + PN  TY +MI G C  G M+KA +L
Sbjct: 673 PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 732

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINE 537
            + M+E+   PDV+T+++L +GF + N+
Sbjct: 733 LIKMKESGIVPDVVTYNVLTNGFCKAND 760



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 242/488 (49%), Gaps = 14/488 (2%)

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFI----AFGRILRSCFTPNAATFNSLIKGLHA 143
           +  G F     +++LI+ +    R +LGF      F  + R    P+  T N  +  L  
Sbjct: 140 SVVGRFEWTQAFDLLIHVYSTQFR-NLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVK 198

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
            +   +   +F  +    C P+V ++  +IN LC+ G    A+ LF +M     ++G+  
Sbjct: 199 ANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKME----KLGI-- 251

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PN VTY+ II+GLC+ G +D A  L  +M  + + P++ TY +LI+GL   N +++   
Sbjct: 252 SPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNH 311

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +  EM+  G  P+VV FN ++D  CK   ++ A ++ D+M+ + + P + T  +LM GFC
Sbjct: 312 ILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFC 371

Query: 324 LMGKINRAEELFGSMESMGCK-HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              +I  AE     + S G   H D  Y++ ++  CK      A    + M+S+  +P+ 
Sbjct: 372 KSDQIEHAENALEEILSSGLSIHPDNCYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSD 430

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +    L  GL +  +   A +L+  +   G  A   T    I GLC  G + EA  + + 
Sbjct: 431 LLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKE 490

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +      +D   YN LI G C  G+++  + L   +    + P++ TYN +++GLCN G+
Sbjct: 491 MLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 550

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D A  L+ + + +    ++ T+ +++ G+ + N    V  L +++  KK+  ++ + +I
Sbjct: 551 LDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 610

Query: 563 VVDLLVKN 570
           ++    +N
Sbjct: 611 IIKAHCQN 618



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 221/509 (43%), Gaps = 84/509 (16%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++  L+  L K   +D        +   G  PN+  +N LI+ +CK+G +      
Sbjct: 288 PNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI 347

Query: 119 FGRILRSCFTPNAATFNSLIKGL-------HAESRIME---------------------- 149
              ++    TP + T  SL++G        HAE+ + E                      
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407

Query: 150 -----AAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTMIALNL-FEEMANGNGEIGVV 202
                +A  FTK+  +    P+ +    L+ GLC+ G  + A  L F  +  G+      
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS------ 461

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
              + VT + +I GLC  G + +A  +  +M +  +  D +TYN+LI G C+        
Sbjct: 462 -PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           RL  EM  +G+QP + T+N ++  LC   K+D+A +L D     G+  N  TY  +M+G+
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   +I   E LF  + S   + + + YNI+I  +C+N  V  AL L   M SKGI P  
Sbjct: 581 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 640

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDG------------------------------ 412
            TY++L  G+  I  VE A  L DEM+++G                              
Sbjct: 641 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 700

Query: 413 -----VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
                +  +  TYT  IDG CK G + +A  L   ++      D+  YN L +G CK+  
Sbjct: 701 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 760

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           +  A+++   +    L  + +TY  ++ G
Sbjct: 761 MDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 144/272 (52%), Gaps = 6/272 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            +   G+ P++YTYN L+   C +G++      +     S    N  T+  +++G    +
Sbjct: 525 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 584

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           RI +   LF +L +   E N I YN +I   C+ G+   AL L E M +     G++  P
Sbjct: 585 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK----GIL--P 638

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  TYS++I G+C  G V+ AK L  +M+ E   P+VV Y +LI G C     + A+  +
Sbjct: 639 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 698

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +EM+   + P+  T+ V++D  CK   M++A+ LL  M + G+ P+  TYN L +GFC  
Sbjct: 699 LEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKA 758

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGY 357
             ++ A ++   M + G   D+++Y  L++G+
Sbjct: 759 NDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/543 (29%), Positives = 274/543 (50%), Gaps = 15/543 (2%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHY-------DTRLNATGLFPNLYTYNILINCFCKI 109
           ++R +   P V + + LL +LA+ + +       DT +NA G+ P+ Y Y +++ C C++
Sbjct: 180 LMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNA-GVKPDCYIYTVVVKCLCEL 238

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
              +       +   +  + +  T+N  I GL    R+ EA  +   L   G + +++TY
Sbjct: 239 KDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTY 298

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
            TL+ GLCR     + + + +EM     E+G V  P+    S +I+GL K G ++ A  L
Sbjct: 299 CTLVLGLCRIQEFEVGMEMMDEMI----ELGYV--PSEAAVSGLIEGLIKMGSIEGAFEL 352

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             ++    + P++  YNS+I+ LC      EA+ LF  M ++G+ P+ VT+ +++D   +
Sbjct: 353 LNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGR 412

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             K+D A    + M++ G+     +YN++++  C  GK+  AE LF  M   G K    +
Sbjct: 413 RAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVAT 472

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  LI+GYCK+  V +A  LY EM  KGI P  VT+  L  GL +I+++  A KLFDEM 
Sbjct: 473 YTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV 532

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
              +  +  TY   I+G C+ G    A EL   +       D   Y  LI GLC +GR+ 
Sbjct: 533 ELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVS 592

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A E    L H     + + Y  ++QG C +G++ +A     +M       D++++ +LI
Sbjct: 593 EAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI 652

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
            G +  N+   + ELL +M  K + PD  I +I++D  +K+    K+   + +   +G V
Sbjct: 653 SGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYV 711

Query: 590 GES 592
             S
Sbjct: 712 PNS 714



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 246/510 (48%), Gaps = 15/510 (2%)

Query: 67  VSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + ++N+ +  L K+K           L   GL  +L TY  L+   C+I    +G     
Sbjct: 260 IVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMD 319

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++   + P+ A  + LI+GL     I  A  L  K+   G  PN+  YN++IN LC+TG
Sbjct: 320 EMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTG 379

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  LF  MA    E G+   PN VTY+ +IDG  +   +D A   F +M +  I+ 
Sbjct: 380 KLEEAELLFSVMA----ERGL--NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V +YNS+I+  C       A+ LF EM+D+G++P+V T+  ++   CK+  + +A +L 
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLY 493

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  +G+ PN  T+  L+ G C + K+  A +LF  M  +    ++V+YN+LI G+C+ 
Sbjct: 494 HEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCRE 553

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
                A  L  EM+ KG+ P   TY  L  GL    +V  A +  +++       D   Y
Sbjct: 554 GNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCY 613

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG-LCKSGRLKFAWELFCSLP 479
           T  + G CK G I EA+   + +     ++D+ +Y  LI G L ++ R+ F  EL   + 
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILF--ELLREMH 671

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P+ V Y I+I G    G + KA + +  M      P+ +T+  L++G  +    +
Sbjct: 672 GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +   L  +M   + +P+       +D L K
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTK 761



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 163/585 (27%), Positives = 258/585 (44%), Gaps = 80/585 (13%)

Query: 62  PSPPPVSSFN---ILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           PS   VS      I + S+        ++   G+ PNL+ YN +IN  CK G++    + 
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELL 387

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      PN  T+  LI G    +++  A   F K+   G    V +YN++IN  C+
Sbjct: 388 FSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCK 447

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +A  LF+EM +         KP   TY+++I G CK+G V KA  L+ +M  + I
Sbjct: 448 FGKMKMAELLFKEMVDKG------LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGI 501

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VT+ +LI GLC  N   EA +LF EM++  + P+ VT+NV+++  C+      A  
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561

Query: 299 LLDLMVQRGVRPNACTY-----------------------------------NTLMDGFC 323
           LLD M+++G+ P+  TY                                     L+ GFC
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFC 621

Query: 324 LMGKINRAE----------------------------------ELFGSMESMGCKHDDVS 349
             G+I  A                                   EL   M   G + D+V 
Sbjct: 622 KEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVI 681

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y ILI+G+ K+  +++A   +  M+ +G  P  VTY  L  GLF+   V  A  LF  M 
Sbjct: 682 YTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRML 741

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                 +  TY  F+D L K G +  A++L   + +     +   YN LI G C+ G+ +
Sbjct: 742 VGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQ 800

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A +L   +    +VP+ +TY+  I   C  G +D A D++  M +    PD + F+ LI
Sbjct: 801 EAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLI 860

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIV-SIVVDLLVKNEIS 573
           H      E  +  +L + M  + + P  S   S++V L  +  ++
Sbjct: 861 HACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLT 905



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 217/428 (50%), Gaps = 6/428 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           +++ F+ LI+      R+M+   +   ++ +G  P V T + L+N L R       L LF
Sbjct: 154 SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           + + N     GV  KP+   Y+ ++  LC+    +KAK +  Q +    +  +VTYN  I
Sbjct: 214 DTLVNA----GV--KPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFI 267

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           +GLC +    EA  +   + ++G++  +VT+  ++  LC+ ++ +    ++D M++ G  
Sbjct: 268 NGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYV 327

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+    + L++G   MG I  A EL   +  +G   +   YN +IN  CK  ++EEA  L
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELL 387

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  M  +G+ P  VTY  L  G     +++ A   F++M   G++A   +Y + I+  CK
Sbjct: 388 FSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCK 447

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G +  A  LF+ +     +  +  Y  LI G CK G +  A++L+  +    + PN VT
Sbjct: 448 FGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVT 507

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           +  +I GLC   +M +A  LF +M E    P+ +T+++LI G  R    ++  ELL +M 
Sbjct: 508 FTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMI 567

Query: 550 EKKVMPDA 557
           +K + PD 
Sbjct: 568 KKGLSPDT 575



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 171/372 (45%), Gaps = 29/372 (7%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN  TYN+LI   C+ G  +  F     +++   +P+  T+  LI GL +  R+ EA 
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA------------------ 193
                L       + + Y  L+ G C+ G    AL   +EM                   
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGA 655

Query: 194 -NGNGEI---------GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            N N  I         G   +P+ V Y+ +IDG  K G + KA   +  M  E   P+ V
Sbjct: 656 LNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSV 715

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY +L++GL  A   NEAK LF  M+     P+ +T+   +D L K   M+ A +L + M
Sbjct: 716 TYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM 775

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +Q G   N  TYN L+ G+C +GK   A +L   M  +G   D ++Y+  I  YCK   V
Sbjct: 776 LQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNV 834

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + A+ ++  M+ +G+KP  V +N L        +++ AL+L ++M   G+     TY + 
Sbjct: 835 DAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSL 894

Query: 424 IDGLCKNGYIIE 435
           +  L +   + +
Sbjct: 895 MVQLAQRARLTQ 906



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%)

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
            +++LI  Y +NK V + + +   M   G+ P V T + L   L  I +    L+LFD +
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              GV  D   YT  +  LC+     +A E+        C L I  YN  I+GLCKS R+
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A E+  SL    L  ++VTY  ++ GLC   + +   ++  +M E    P       L
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           I G I++       ELL+K+ +  V+P+  + + +++ L K
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCK 377


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/439 (32%), Positives = 238/439 (54%), Gaps = 14/439 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
            ++ G+ P L TYN ++   CKIG+          +L+   TPNAAT+N+L+  +     
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I+EA  +F ++   G  P+++++++LI  L R GH   AL  F EM       G+V  P+
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--PD 431

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP----DVVTYNSLIHGLCHANDWNEAK 262
            V Y+ +IDG C+ G +  A    L+M+DE +      DVVTYN+ ++GLC    + +A 
Sbjct: 432 NVIYTILIDGFCRNGALSDA----LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF EM+++G+ P   TF  ++   CK+  MD+A  L + MV+  ++P+  TYNTL+DGF
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G++ RA+EL+  M       D +SY  ++NG+C +  + EAL+L  +M+ KGI+P +
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VT NTL  G      +  A +   +M  +G+  D+ +Y T IDG  K   + +A  L   
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +     + +I  YN +++G C  G+++ A ++   +    + P+  TY+ +I G  +   
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727

Query: 503 MDKARDLFLDMEENAAAPD 521
           M +A     +M +    PD
Sbjct: 728 MKEAFRFHDEMLQRGLVPD 746



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 249/471 (52%), Gaps = 6/471 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y++L+  + +  ++  G  AF  + R   + +    N L+ GL     +  A  ++ ++ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G E NV T N ++N LC+       +    +M  G G        + VTY+T+I+  C
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFA-----DIVTYNTLINAYC 303

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           +EG V++A  L        + P ++TYN++++GLC    ++ AK + IEM+  G+ P+  
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++ E+C+   + EA  + D M +RGV P+  ++++L+      G + +A   F  M
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           E  G   D+V Y ILI+G+C+N  + +AL +  EM+++G    VVTYNT   GL +    
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A  LF+EM   G+  D  T+TT I G CK+G + +A+ LF  +     + D   YN L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDG CK+G +  A EL+  +    ++P+ ++Y  ++ G C+ G + +A +L   M E   
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            P+++T + LI G+ R  +  K  E L KM    ++PD+   + ++D  +K
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 256/496 (51%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L K++ ++      + +   G+F ++ TYN LIN +C+ G V   F    
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
                   P   T+N+++ GL    +   A  +  ++   G  PN  TYNTL+  +CR  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           + + A  +F+EM+      GV+  P+ V++S++I  L + G + +A   F +M+   I P
Sbjct: 377 NILEAQEIFDEMSRR----GVL--PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVP 430

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI G C     ++A ++  EM+ +G    VVT+N  ++ LCK +   +A  L 
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + MV+RG+ P+  T+ TL+ G+C  G +++A  LF +M     K D V+YN LI+G+CK 
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+  A  L+ +M+ K I P  ++Y T+  G      +  AL L D+M   G+  +  T 
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I G C++G + +A E    +       D  +YN LIDG  K   L+ A+ L   +  
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L  N++TYN+++ G C +G+M +A  +   M E    PD  T+  LI+G +  +   +
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730

Query: 541 VNELLHKMKEKKVMPD 556
                 +M ++ ++PD
Sbjct: 731 AFRFHDEMLQRGLVPD 746



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 230/452 (50%), Gaps = 6/452 (1%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N L+    + G V L +  +G ++R     N  T N ++  L  + +        + ++ 
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G   +++TYNTLIN  CR G    A  L    ++   E      P  +TY+ I+ GLCK
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME------PGLLTYNAILYGLCK 339

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G  D+AK + ++M    + P+  TYN+L+  +C  ++  EA+ +F EM  +GV P +V+
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F+ ++  L +N  + +A      M + G+ P+   Y  L+DGFC  G ++ A ++   M 
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           + GC  D V+YN  +NG CK K   +A  L+ EMV +G+ P   T+ TL  G  +   ++
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL LF+ M R  +  D  TY T IDG CK G +  A EL+  +       D  +Y  ++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G C SG L  A  L   +    + PN+VT N +I+G C  G M KA +    M  N   
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGII 639

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           PD  +++ LI G+++     K   L+++M+++
Sbjct: 640 PDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 262/524 (50%), Gaps = 16/524 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EAF I    LR       +++ N LL  L +    D            G+  N+YT NI
Sbjct: 207 SEAFQI----LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNI 262

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  CK  +          +       +  T+N+LI     E  + EA  L     + G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP ++TYN ++ GLC+ G    A ++  EM     ++G+   PN  TY+T++  +C+  
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEML----QLGLT--PNAATYNTLLVEICRRD 376

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A+ +F +M    + PD+V+++SLI  L       +A   F EM   G+ P  V + 
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYT 436

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  C+N  + +A ++ D M+ RG   +  TYNT ++G C       A+ LF  M   
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  ++  LI GYCK+  +++AL+L+  MV   +KP  VTYNTL  G  +  ++  A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L+D+M R  +  D  +Y T ++G C +G + EA+ L   +       ++   N LI G
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C+SG +  A+E    +    ++P+  +YN +I G   +  ++KA  L  +ME+     +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +IT++++++GF    +  +  ++L KM E  + PD +  S +++
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 208/377 (55%), Gaps = 15/377 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
           EA  IFD M R    P  VS F+ L+  LA+N H      +   +  +G+ P+   Y IL
Sbjct: 380 EAQEIFDEMSRRGVLPDLVS-FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 103 INCFCKIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           I+ FC+ G +S        +L R CF  +  T+N+ + GL  +    +A  LF ++   G
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+  T+ TLI G C+ G+   ALNLFE M   N       KP+ VTY+T+IDG CK G
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN------LKPDKVTYNTLIDGFCKAG 551

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +AK L+  M  ++I PD ++Y ++++G C +    EA  L  +M+++G++P++VT N
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   C++  M +A   L  M+  G+ P++ +YNTL+DG+     + +A  L   ME  
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + + ++YN+++NG+C   +++EA  + R+M+  GI P   TY++L  G      ++ A
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 402 LKLFDEMQRDGVAADTR 418
            +  DEM + G+  D R
Sbjct: 732 FRFHDEMLQRGLVPDDR 748



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 119/240 (49%)

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y++L+  Y + K++ E    ++ +  KG+  ++   N L  GL     V+ A +++ E+ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R G+  +  T    ++ LCK+      +     +       DI  YN LI+  C+ G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A++L  S     + P ++TYN ++ GLC  G+ D+A+D+ ++M +    P+  T++ L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
               R +   +  E+  +M  + V+PD    S ++ +L +N    ++L  F   ER G V
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 256/532 (48%), Gaps = 23/532 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF----------PNLY 97
             A  + D + R     P   S+N++L+ LA+    D   +A  L+          P  +
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARA---DCHADALALYRRMVHRDRVPPTTF 176

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T+ +     C++GR          + R    P+A  + ++I  L  +  + EAA L  ++
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              GC  +V T++ ++ G+C  G    A  L + M          C P  +TY  ++ GL
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG------CMPGVMTYGFLLQGL 290

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+    D+A+A+  ++ + N    VV +N++I G        EA  L+  M  +G QP  
Sbjct: 291 CRVRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T++++M  LCK  ++  A RLL  M ++G  PN  TY  ++  FC  G  +    L   
Sbjct: 347 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G   +   YN +I   CK+  ++EA+ L +EM S+G  P + +YNT+   L    Q
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  +F+ +  +GV A+  TY T I  L ++G   +AV L + + +  C LD+ +YN 
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  +CK G +  +  L   +    + PN V+YNI+I  LC + ++  A +L   M    
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            APD++T++ LI+G  ++        LL K+  + V PD    +I++    K
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 234/489 (47%), Gaps = 31/489 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           +A  ++  M+     PP   +F +   +L +    D  L         G  P+   Y  +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 216

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C  G V+        +L      +  TF+ +++G+    R+ EAA L  ++   GC
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 163 EPNVITYNTLINGLCRT-----GHTMIA----LN--LFEEMANG---NGEIGVV------ 202
            P V+TY  L+ GLCR         M+     LN  LF  +  G    G++         
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYET 336

Query: 203 -----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                C+P+  TYS ++ GLCK G +  A  L  +M+ +   P+VVTY  ++H  C    
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 396

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           W++ + L  EM  +G+  +   +N ++  LCK+ +MDEA  L+  M  +G  P+ C+YNT
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           ++   C   ++  AE +F ++   G   + ++YN +I+   ++   ++A+ L +EM+  G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
               VV+YN L   + +   V+ +L L +EM   G+  +  +Y   I  LCK   + +A+
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           EL + +       DI  YN LI+GLCK G +  A  L   L +  + P+++TYNI+I   
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636

Query: 498 CNDGQMDKA 506
           C    +D A
Sbjct: 637 CKVRLLDDA 645



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 193/384 (50%), Gaps = 33/384 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  P + TY  L+   C++ +        GR+       N   FN++I G  AE 
Sbjct: 270 RMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEG 325

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV--- 202
           ++ EA  L+  +   GC+P+  TY+ L++GLC+ G    A+ L  EM        VV   
Sbjct: 326 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYT 385

Query: 203 ------CKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
                 CK                     N+  Y+ +I  LCK+G +D+A  L  +M+ +
Sbjct: 386 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQ 445

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             NPD+ +YN++I+ LC+     EA+ +F  ++++GV  + +T+N I+  L ++ +  +A
Sbjct: 446 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 505

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            RL   M+  G   +  +YN L+   C  G ++R+  L   M   G K ++VSYNILI+ 
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK + V +AL L ++M+++G+ P +VTYNTL  GL ++  +  AL L +++  + V  D
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625

Query: 417 TRTYTTFIDGLCKNGYIIEAVELF 440
             TY   I   CK   + +A  L 
Sbjct: 626 IITYNILISWHCKVRLLDDAAMLL 649



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 5/336 (1%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDE 295
            + P   +YN ++  L  A+   +A  L+  M+ +  V P+  TF V    LC+  + DE
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  LL  M + G  P+A  Y T++   C  G +  A  L   M  MGC  D  +++ ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G C    V EA  L   M++KG  P V+TY  L  GL  + Q + A  +   +    V  
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV- 312

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
               + T I G    G + EA EL+ T+ +  C+ D   Y+ L+ GLCK GR+  A  L 
Sbjct: 313 ---LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +      PNVVTY I++   C +G  D  R L  +M       +   ++ +I+   + 
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               +   L+ +M+ +   PD    + ++  L  NE
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 465



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 16/291 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD-TR-----LNATGLFPNLYTYNILINCFCKIGRV--SLGF 116
           P V ++ I+L S  KN  +D TR     ++A GL  N   YN +I   CK GR+  ++G 
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           I   R  + C  P+  ++N++I  L    ++ EA  +F  L   G   N ITYNT+I+ L
Sbjct: 439 IQEMRS-QGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 496

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            R G    A+ L +EM      I   C  + V+Y+ +I  +CK+G VD++  L  +M ++
Sbjct: 497 LRDGRWQDAVRLAKEM------ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I P+ V+YN LI  LC      +A  L  +M++QG+ P +VT+N +++ LCK   M  A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
             LL+ +    V P+  TYN L+   C +  ++ A  L     +  C   D
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGD 661


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/439 (32%), Positives = 238/439 (54%), Gaps = 14/439 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
            ++ G+ P L TYN ++   CKIG+          +L+   TPNAAT+N+L+  +     
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I+EA  +F ++   G  P+++++++LI  L R GH   AL  F EM       G+V  P+
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--PD 431

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP----DVVTYNSLIHGLCHANDWNEAK 262
            V Y+ +IDG C+ G +  A    L+M+DE +      DVVTYN+ ++GLC    + +A 
Sbjct: 432 NVIYTILIDGFCRNGALSDA----LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF EM+++G+ P   TF  ++   CK+  MD+A  L + MV+  ++P+  TYNTL+DGF
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G++ RA+EL+  M       D +SY  ++NG+C +  + EAL+L  +M+ KGI+P +
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VT NTL  G      +  A +   +M  +G+  D+ +Y T IDG  K   + +A  L   
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINE 667

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +     + +I  YN +++G C  G+++ A ++   +    + P+  TY+ +I G  +   
Sbjct: 668 MEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDN 727

Query: 503 MDKARDLFLDMEENAAAPD 521
           M +A     +M +    PD
Sbjct: 728 MKEAFRFHDEMLQRGLVPD 746



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 249/471 (52%), Gaps = 6/471 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y++L+  + +  ++  G  AF  + R   + +    N L+ GL     +  A  ++ ++ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G E NV T N ++N LC+       +    +M  G G        + VTY+T+I+  C
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFA-----DIVTYNTLINAYC 303

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           +EG V++A  L        + P ++TYN++++GLC    ++ AK + IEM+  G+ P+  
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++ E+C+   + EA  + D M +RGV P+  ++++L+      G + +A   F  M
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           E  G   D+V Y ILI+G+C+N  + +AL +  EM+++G    VVTYNT   GL +    
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A  LF+EM   G+  D  T+TT I G CK+G + +A+ LF  +     + D   YN L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           IDG CK+G +  A EL+  +    ++P+ ++Y  ++ G C+ G + +A +L   M E   
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            P+++T + LI G+ R  +  K  E L KM    ++PD+   + ++D  +K
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 256/496 (51%), Gaps = 12/496 (2%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L K++ ++      + +   G+F ++ TYN LIN +C+ G V   F    
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
                   P   T+N+++ GL    +   A  +  ++   G  PN  TYNTL+  +CR  
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           + + A  +F+EM+      GV+  P+ V++S++I  L + G + +A   F +M+   I P
Sbjct: 377 NILEAQEIFDEMSRR----GVL--PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVP 430

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI G C     ++A ++  EM+ +G    VVT+N  ++ LCK +   +A  L 
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + MV+RG+ P+  T+ TL+ G+C  G +++A  LF +M     K D V+YN LI+G+CK 
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            E+  A  L+ +M+ K I P  ++Y T+  G      +  AL L D+M   G+  +  T 
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I G C++G + +A E    +       D  +YN LIDG  K   L+ A+ L   +  
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L  N++TYN+++ G C +G+M +A  +   M E    PD  T+  LI+G +  +   +
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730

Query: 541 VNELLHKMKEKKVMPD 556
                 +M ++ ++PD
Sbjct: 731 AFRFHDEMLQRGLVPD 746



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 230/452 (50%), Gaps = 6/452 (1%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N L+    + G V L +  +G ++R     N  T N ++  L  + +        + ++ 
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G   +++TYNTLIN  CR G    A  L    ++   E      P  +TY+ I+ GLCK
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME------PGLLTYNAILYGLCK 339

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G  D+AK + ++M    + P+  TYN+L+  +C  ++  EA+ +F EM  +GV P +V+
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F+ ++  L +N  + +A      M + G+ P+   Y  L+DGFC  G ++ A ++   M 
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           + GC  D V+YN  +NG CK K   +A  L+ EMV +G+ P   T+ TL  G  +   ++
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL LF+ M R  +  D  TY T IDG CK G +  A EL+  +       D  +Y  ++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G C SG L  A  L   +    + PN+VT N +I+G C  G M KA +    M  N   
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGII 639

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           PD  +++ LI G+++     K   L+++M+++
Sbjct: 640 PDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 262/524 (50%), Gaps = 16/524 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EAF I    LR       +++ N LL  L +    D            G+  N+YT NI
Sbjct: 207 SEAFQI----LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNI 262

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  CK  +          +       +  T+N+LI     E  + EA  L     + G
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP ++TYN ++ GLC+ G    A ++  EM     ++G+   PN  TY+T++  +C+  
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEML----QLGLT--PNAATYNTLLVEICRRD 376

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A+ +F +M    + PD+V+++SLI  L       +A   F EM   G+ P  V + 
Sbjct: 377 NILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYT 436

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  C+N  + +A ++ D M+ RG   +  TYNT ++G C       A+ LF  M   
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  ++  LI GYCK+  +++AL+L+  MV   +KP  VTYNTL  G  +  ++  A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L+D+M R  +  D  +Y T ++G C +G + EA+ L   +       ++   N LI G
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C+SG +  A+E    +    ++P+  +YN +I G   +  ++KA  L  +ME+     +
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +IT++++++GF    +  +  ++L KM E  + PD +  S +++
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 208/377 (55%), Gaps = 15/377 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
           EA  IFD M R    P  VS F+ L+  LA+N H      +   +  +G+ P+   Y IL
Sbjct: 380 EAQEIFDEMSRRGVLPDLVS-FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 103 INCFCKIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           I+ FC+ G +S        +L R CF  +  T+N+ + GL  +    +A  LF ++   G
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFM-DVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+  T+ TLI G C+ G+   ALNLFE M   N       KP+ VTY+T+IDG CK G
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN------LKPDKVTYNTLIDGFCKAG 551

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +AK L+  M  ++I PD ++Y ++++G C +    EA  L  +M+++G++P++VT N
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   C++  M +A   L  M+  G+ P++ +YNTL+DG+     + +A  L   ME  
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + + ++YN+++NG+C   +++EA  + R+M+  GI P   TY++L  G      ++ A
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 402 LKLFDEMQRDGVAADTR 418
            +  DEM + G+  D R
Sbjct: 732 FRFHDEMLQRGLVPDDR 748



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 119/240 (49%)

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y++L+  Y + K++ E    ++ +  KG+  ++   N L  GL     V+ A +++ E+ 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R G+  +  T    ++ LCK+      +     +       DI  YN LI+  C+ G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A++L  S     + P ++TYN ++ GLC  G+ D+A+D+ ++M +    P+  T++ L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
               R +   +  E+  +M  + V+PD    S ++ +L +N    ++L  F   ER G V
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 221/413 (53%), Gaps = 9/413 (2%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            YN ++  +C  G++     A   +      P+A T+N+LI+GL    R   A A+  ++
Sbjct: 2   AYNAMVAGYCGAGQLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
               C P+V+TY  L+   C+      A+ L +EM +        C P+ VTY+ +++G+
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGI 112

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+EG VD A      +      P+ V+YN ++ GLC A  W +A+ L  EM  +G  P+V
Sbjct: 113 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 172

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VTFN+++  LC+   ++ A  +L+ + + G  PN+ +YN L+  FC   K+++A      
Sbjct: 173 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 232

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M S GC  D VSYN L+   C++ EV+ A+ L  ++  KG  P +++YNT+  GL +  +
Sbjct: 233 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            + AL+L +EM   G+  D  TY+T   GLC+   I +A+  F  ++ +    +   YN 
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 352

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +I GLCK      A +LF  +     +PN  TY I+I+GL  +G + +ARDL 
Sbjct: 353 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 405



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 210/400 (52%), Gaps = 9/400 (2%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            +N+++ G     ++  A  L  ++     EP+  TYNTLI GLC  G T  AL + +EM
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     C P+ VTY+ +++  CK     +A  L  +M+D+   PD+VTYN +++G+
Sbjct: 59  LRRR------CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 112

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C     ++A      +   G +P+ V++N+++  LC   + ++A  L+  M Q+G  PN 
Sbjct: 113 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 172

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            T+N L+   C  G +  A E+   +   GC  + +SYN L++ +CK K++++A++    
Sbjct: 173 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 232

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           MVS+G  P +V+YNTL   L    +V+ A++L  +++  G A    +Y T IDGL K G 
Sbjct: 233 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             EA+EL   +     + DI  Y+ +  GLC+  R++ A   F  +    + PN V YN 
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 352

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +I GLC   +   A DLF  M  N   P+  T+ +LI G 
Sbjct: 353 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 204/382 (53%), Gaps = 6/382 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ YTYN LI   C  GR +        +LR    P+  T+  L++     S   +A  L
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             +++  GC P+++TYN ++NG+C+ G    A+   + + +        C+PNTV+Y+ +
Sbjct: 90  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG------CEPNTVSYNIV 143

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC     + A+ L  +M  +   P+VVT+N LI  LC       A  +  ++   G 
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 203

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+ +++N ++   CK +KMD+A   LDLMV RG  P+  +YNTL+   C  G+++ A E
Sbjct: 204 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 263

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   ++  GC    +SYN +I+G  K  + +EAL L  EMVSKG++P ++TY+T+  GL 
Sbjct: 264 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 323

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              ++E A++ F ++Q  G+  +T  Y   I GLCK      A++LF  +    C  +  
Sbjct: 324 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 383

Query: 454 AYNCLIDGLCKSGRLKFAWELF 475
            Y  LI+GL   G +K A +L 
Sbjct: 384 TYTILIEGLAYEGLIKEARDLL 405



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 203/402 (50%), Gaps = 9/402 (2%)

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + YN ++ G C  G    A  L  EM           +P+  TY+T+I GLC  G    A
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---------VEPDAYTYNTLIRGLCGRGRTANA 51

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
            A+  +M      PDVVTY  L+   C  + + +A +L  EM D+G  P +VT+NV+++ 
Sbjct: 52  LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +C+  ++D+A   L  +   G  PN  +YN ++ G C   +   AEEL G M   GC  +
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V++N+LI+  C+   VE AL +  ++   G  P  ++YN L     +  +++ A+   D
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M   G   D  +Y T +  LC++G +  AVEL   L+   C   + +YN +IDGL K+G
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 291

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           + K A EL   +    L P+++TY+ +  GLC + +++ A   F  +++    P+ + ++
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 351

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
            +I G  +  E     +L   M     MP+ S  +I+++ L 
Sbjct: 352 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 393



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 186/365 (50%), Gaps = 13/365 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A  + D MLR     P V ++ ILL +  K   Y         +   G  P++ TYN+++
Sbjct: 51  ALAVLDEMLRRR-CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 109

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N  C+ GRV         +      PN  ++N ++KGL    R  +A  L  ++   GC 
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 169

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PNV+T+N LI+ LCR G    AL + E++          C PN+++Y+ ++   CK+  +
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG------CTPNSLSYNPLLHAFCKQKKM 223

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           DKA A    M      PD+V+YN+L+  LC + + + A  L  ++ D+G  P ++++N +
Sbjct: 224 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 283

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D L K  K  EA  LL+ MV +G++P+  TY+T+  G C   +I  A   FG ++ MG 
Sbjct: 284 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 343

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + + V YN +I G CK +E   A+ L+  M+  G  P   TY  L  GL     ++ A  
Sbjct: 344 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 403

Query: 404 LFDEM 408
           L DE+
Sbjct: 404 LLDEL 408



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 184/362 (50%), Gaps = 3/362 (0%)

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           + Y+ ++ G C  G +D A+ L  +M    + PD  TYN+LI GLC       A  +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ +   P VVT+ ++++  CK     +A +LLD M  +G  P+  TYN +++G C  G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A E   ++ S GC+ + VSYNI++ G C  +  E+A  L  EM  KG  P VVT+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L   L     VE AL++ +++ + G   ++ +Y   +   CK   + +A+     +    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C  DI +YN L+  LC+SG +  A EL   L      P +++YN +I GL   G+  +A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +L  +M      PD+IT+  +  G  R +          K+++  + P+  + + ++  L
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 568 VK 569
            K
Sbjct: 358 CK 359



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 6/140 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S+N ++  L K       L       + GL P++ TY+ +    C+  R+     A
Sbjct: 275 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 334

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG++      PN   +N++I GL        A  LF  +   GC PN  TY  LI GL  
Sbjct: 335 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 394

Query: 179 TGHTMIALNLFEEMANGNGE 198
            G    A +L +E+ +  GE
Sbjct: 395 EGLIKEARDLLDELCSRAGE 414


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 264/540 (48%), Gaps = 49/540 (9%)

Query: 73  LLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           L+A L ++++++       ++  T  F N  + + L+ C+ ++ +    F     +L+  
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  N    N L+KGL       +A +L  +++     P+V +YNT+I G C       AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L  EM  G+G     C  + VT+  +ID  CK G +D+A     +MK   +  D+V Y 
Sbjct: 198 ELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           SLI G C   + +  K LF E++++G  P  +T+N ++   CK  ++ EAS + + M++R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 307 GVRPNACTYNTLMDGFCLMGK--------------------------INR---------A 331
           GVRPN  TY  L+DG C +GK                          IN+         A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV--SKGIKPTVVTYNTLF 389
            E+   M+    + D+++YNIL+ G C   +++EA  L   M+  S    P V++YN L 
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL + +++  AL ++D +     A D  T    ++   K G + +A+EL++ +   K  
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +   Y  +IDG CK+G L  A  L C +    L P+V  YN ++  LC +G +D+A  L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M+ +   PDV++F+++I G ++  +      LL  M    + PD    S +++  +K
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 258/526 (49%), Gaps = 21/526 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH--------YDTRLNATGLFPNLYTYNI 101
           AF +   ML+       V + NILL  L +N           + R N+  L P++++YN 
Sbjct: 126 AFGVLALMLK-RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS--LMPDVFSYNT 182

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I  FC+   +         +  S  + +  T+  LI       ++ EA     ++K  G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            E +++ Y +LI G C  G       LF+E +  G+        P  +TY+T+I G CK 
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKL 295

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G + +A  +F  M +  + P+V TY  LI GLC      EA +    M+++  +P+ VT+
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTY 355

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
           N+I+++LCK+  + +A  +++LM +R  RP+  TYN L+ G C  G ++ A +L   M  
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S     D +SYN LI+G CK   + +AL +Y  +V K      VT N L     +   V
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A++L+ ++    +  ++ TYT  IDG CK G +  A  L   +R+ + +  +  YNCL
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +  LCK G L  AW LF  +      P+VV++NIMI G    G +  A  L + M     
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +PD+ T+  LI+ F+++    +      KM +    PDA I   V+
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 226/479 (47%), Gaps = 43/479 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  +L  Y  LI  FC  G +  G   F  +L    +P A T+N+LI+G     ++ EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           + +F  +   G  PNV TY  LI+GLC  G T  AL     M   + E      PN VTY
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEE------PNAVTY 355

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + II+ LCK+G V  A  +   MK     PD +TYN L+ GLC   D +EA +L   M+ 
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 271 QG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                 P V+++N ++  LCK  ++ +A  + DL+V++    +  T N L++     G +
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           N+A EL+  +       +  +Y  +I+G+CK   +  A  L  +M    ++P+V  YN L
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +   ++ A +LF+EMQRD    D  ++   IDG  K G                 
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG----------------- 578

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             DI++   L+ G+ ++G                L P++ TY+ +I      G +D+A  
Sbjct: 579 --DIKSAESLLVGMSRAG----------------LSPDLFTYSKLINRFLKLGYLDEAIS 620

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            F  M ++   PD    D ++   I   E  K+ EL+ K+ +K ++ D  +   V+D +
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 11/419 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           +FD +L    SP  ++ +N L      L  L +       +   G+ PN+YTY  LI+  
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C +G+          ++     PNA T+N +I  L  +  + +A  +   +K     P+ 
Sbjct: 328 CGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           ITYN L+ GLC  G    A  L   M   +        P+ ++Y+ +I GLCKE  + +A
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQA 443

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             ++  + ++    D VT N L++    A D N+A  L+ ++ D  +  +  T+  ++D 
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK   ++ A  LL  M    ++P+   YN L+   C  G +++A  LF  M+      D
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            VS+NI+I+G  K  +++ A SL   M   G+ P + TY+ L     ++  ++ A+  FD
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           +M   G   D     + +      G   +  EL + L      LD +    ++D +C S
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 154/319 (48%)

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           ++L+  L  + +   A   + +M++     + V+ + +++   + RK   A  +L LM++
Sbjct: 76  SNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RG   N   +N L+ G C   +  +A  L   M       D  SYN +I G+C+ KE+E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           AL L  EM   G   ++VT+  L     +  +++ A+    EM+  G+ AD   YT+ I 
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           G C  G +     LF  +           YN LI G CK G+LK A E+F  +    + P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NV TY  +I GLC  G+  +A      M E    P+ +T++++I+   +    +   E++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 546 HKMKEKKVMPDASIVSIVV 564
             MK+++  PD    +I++
Sbjct: 376 ELMKKRRTRPDNITYNILL 394


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/450 (34%), Positives = 235/450 (52%), Gaps = 17/450 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+L+ YN LIN  CK G++      F  +      PN  T++ LI       ++  A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVT 209
                K+   G +  V  Y++LI+G C+ G    A +LF+EM ANG        KPN V 
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG-------LKPNVVI 462

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+++I G CKEG +  A  L+ +M  + I+P+  T+ +LI GLCHAN   EA +LF EM+
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +  V P+ VT+NV+++  CK      A  LLD MV++G+ P+  TY  L+ G C  G+++
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 330 RAEELFGSM--------ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            A E    +        E  GC  + V+Y  LING CK   +++A  L REM++    P 
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TY      L     +E A++L D +  +G  A+T TY   I G CK G I EA E+  
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +       D  +Y+ +I   C+ G LK A +L+ S+ +  + P+ V YN +I G C  G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           ++ KA +L  DM      P+  T++ LIHG
Sbjct: 762 ELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 249/540 (46%), Gaps = 54/540 (10%)

Query: 67  VSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V+++N+ +  L KN+           L+  GL  ++ TY  L+   CK+     G     
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++   F P+ A  ++L+ GL  +  I  A  L  K+K FG  P++  YN LIN +C+ G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A +LF  M    G  G+   PN VTYS +ID  CK G +D A     +M +  I  
Sbjct: 370 KLDEAESLFNNM----GHKGLF--PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V  Y+SLI G C       AK LF EM+  G++P+VV +  ++   CK  ++  A RL 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  +G+ PN  T+  L+ G C   ++  A +LFG M       ++V+YN+LI G+CK 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD--------G 412
                A  L  EMV KG+ P   TY  L  GL    +V  A +  +++Q +        G
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG 603

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTL---------RILKCELD-----------I 452
              +  TYT  I+GLCK G + +A  L R +             C LD           I
Sbjct: 604 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 663

Query: 453 Q--------------AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           Q               YN LI G CK GR++ A E+  ++    + P+ ++Y+ +I   C
Sbjct: 664 QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G + +A  L+  M      PD + ++ LI+G     E +K  EL   M  + V P+ +
Sbjct: 724 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 783



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 245/486 (50%), Gaps = 14/486 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P + T + ++N   +I +  +    F  I+ S   P+   + ++++ L      + A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++++ GC+ +V TYN  I GLC+      A+    E+ N     G+  + +  TY
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV----EIKNLLSYKGL--RADVGTY 288

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T++ GLCK    +  + +  +M +    P     ++L+ GL    +   A  L  ++  
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV PS+  +N +++ +CK+ K+DEA  L + M  +G+ PN  TY+ L+D FC  GK++ 
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A    G M  +G K     Y+ LI+G+CK  ++  A SL+ EM++ G+KP VV Y +L  
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +  ++ +A +L+ EM   G++ +T T+T  I GLC    + EA +LF  +       
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   YN LI+G CK G    A+EL   +    LVP+  TY  +I GLC+ G++ +AR+  
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 511 LDM--------EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            D+        E     P+V+T+  LI+G  +I    K   L  +M     +P+ +  + 
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648

Query: 563 VVDLLV 568
            +D L 
Sbjct: 649 FLDYLT 654



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 224/460 (48%), Gaps = 6/460 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           F     +++LI  + +  R   G +    ++     P   T + ++ GL    +   A  
Sbjct: 142 FSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALH 201

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           LF ++ + G  P+V  Y  ++  LC     + A  +   M +        C  +  TY+ 
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG------CDLSVATYNV 255

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            I GLCK   V +A  +   +  + +  DV TY +L+ GLC   ++   + +  EM++ G
Sbjct: 256 FIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             PS    + ++D L K   +  A  L++ + + GV P+   YN L++  C  GK++ AE
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            LF +M   G   +DV+Y+ILI+ +CK  +++ AL    +M   GIK TV  Y++L  G 
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            ++ ++  A  LFDEM  +G+  +   YT+ I G CK G +  A  L+  +       + 
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             +  LI GLC + R+  A +LF  +    ++PN VTYN++I+G C +G   +A +L  +
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           M E    PD  T+  LI G       S+  E ++ ++ ++
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 15/363 (4%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           L  L   K     + A GL PN+  Y  LI+ +CK G +   F  +  +     +PN  T
Sbjct: 438 LGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F +LI GL   +R+ EA  LF ++  +   PN +TYN LI G C+ G+T+ A  L +EM 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF--LQMKDENIN------PDVVTY 245
               E G+V  P+T TY  +I GLC  G V +A+     LQ + + +N      P+VVTY
Sbjct: 558 ----EKGLV--PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTY 611

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            +LI+GLC     ++A+ L  EM+     P+  T+   +D L     +++A +L D++++
Sbjct: 612 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 671

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G   N  TYN L+ GFC +G+I  A E+  +M   G   D +SY+ +I  YC+  +++E
Sbjct: 672 -GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 730

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+ L+  M+++G+ P  V YN L  G     ++  A +L D+M R GV  +  TY + I 
Sbjct: 731 AIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 790

Query: 426 GLC 428
           G C
Sbjct: 791 GTC 793



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 211/442 (47%), Gaps = 6/442 (1%)

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F +F    R C       F+ LI+      R ++   +   +   G  P + T + ++NG
Sbjct: 130 FESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNG 189

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L R     +AL+LF+E+ +         +P+   Y+ ++  LC+     +A+ +  +M+ 
Sbjct: 190 LIRIRQFRMALHLFDEIVSSG------LRPDVYVYTAVVRSLCELKDFIRAREVIGRMES 243

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
              +  V TYN  I GLC      EA  +   +  +G++  V T+  ++  LCK  + + 
Sbjct: 244 SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEA 303

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
              +++ M++ G  P+    + L+DG    G I  A +L   ++  G       YN LIN
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             CK+ +++EA SL+  M  KG+ P  VTY+ L     +  +++ AL    +M   G+ A
Sbjct: 364 SMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
               Y++ I G CK G +  A  LF  +     + ++  Y  LI G CK G L  A+ L+
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + PN  T+  +I GLC+  +M +A  LF +M E    P+ +T+++LI G  + 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 536 NEPSKVNELLHKMKEKKVMPDA 557
               +  ELL +M EK ++PD 
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDT 565



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 155/335 (46%), Gaps = 35/335 (10%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           MMD G+ P + T + +++ L + R+   A  L D +V  G+RP+   Y  ++   C +  
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
             RA E+ G MES GC     +YN+ I G CKN+ V EA+ +   +  KG++  V TY T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L LGL ++ + E   ++ +EM   G        +  +DGL K G I  A +L   ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD--- 504
               +  YN LI+ +CK G+L  A  LF ++ H  L PN VTY+I+I   C  G++D   
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 505 --------------------------------KARDLFLDMEENAAAPDVITFDMLIHGF 532
                                            A+ LF +M  N   P+V+ +  LI G+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +  E      L H+M  K + P+    + ++  L
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 48/316 (15%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P   +F  L++ L    H +    A  LF         PN  TYN+LI   CK G     
Sbjct: 493 PNTYTFTALISGLC---HANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF--------GCEPNVI 167
           F     ++     P+  T+  LI GL +  R+ EA      L+          GC PNV+
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVV 609

Query: 168 TYNTLINGLCRTGHTMIALNLFEEM--------------------ANGNGEIGVVCK--- 204
           TY  LINGLC+ G    A  L  EM                    + GN E  +      
Sbjct: 610 TYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL 669

Query: 205 -----PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                 NTVTY+ +I G CK G + +A  + + M D  I+PD ++Y+++I+  C   D  
Sbjct: 670 LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 729

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           EA +L+  M+++GV P  V +N ++   C   ++ +A  L D M++RGV+PN  TYN+L+
Sbjct: 730 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 789

Query: 320 DGFCLMGKINRAEELF 335
            G CLM  ++   + F
Sbjct: 790 HGTCLMSSVSSTADYF 805



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 100/217 (46%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++NG  + ++   AL L+ E+VS G++P V  Y  +   L E+     A ++   M+  G
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
                 TY  FI GLCKN  + EAVE+   L       D+  Y  L+ GLCK    +   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           E+   +     VP+    + ++ GL   G +  A DL   +++   AP +  ++ LI+  
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  +   L + M  K + P+    SI++D   K
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCK 402



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 54/121 (44%)

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            I+  + +++GL +  + + A  LF  +    L P+V  Y  +++ LC      +AR++ 
Sbjct: 179 QIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI 238

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             ME +     V T+++ I G  +     +  E+ + +  K +  D      +V  L K 
Sbjct: 239 GRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV 298

Query: 571 E 571
           E
Sbjct: 299 E 299



 Score = 39.7 bits (91), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K +++ LN  G+ P+   YN LI   C  G ++  F     ++R    PN AT+NSLI G
Sbjct: 733 KLWESMLN-RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791

Query: 141 LHAESRIMEAAALFT 155
               S +   A  F+
Sbjct: 792 TCLMSSVSSTADYFS 806


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 253/520 (48%), Gaps = 53/520 (10%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PN +TY ILI  F   G + +       +  + F  NA    +L+KGL    R++EA  
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            F  + A  C P+V+TY  L++ LC+ G    A  +  EM      I   C P+TVT+ST
Sbjct: 66  HFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREM------IARGCAPDTVTFST 118

Query: 213 IIDGLCKEGFVDKAKALFLQMKD------------------------------------- 235
           +IDGLCK G  ++A   F  ++D                                     
Sbjct: 119 LIDGLCKFGSEEQA---FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVV 175

Query: 236 --ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
             +   P V+ +N +I+G C A D + A +L   M+++G  P+V TF +++  LCK  ++
Sbjct: 176 IAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRV 235

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA +LL+ MV  G  PN  TY+T+++G C  G+++ A ELF  ME   C  + V++NIL
Sbjct: 236 GEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNIL 295

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G CK K +EEA  LY  M   G  P ++TYN+L  GL +  QV+ A +LF  +   GV
Sbjct: 296 IDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV 355

Query: 414 -AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
            AA+  TY+T   G    G + +A  +F  L       D+  Y  LI   CK+ R     
Sbjct: 356 SAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 415

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           EL   +      P V T + ++ GL      ++A  LF  M       D + +++++ G 
Sbjct: 416 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 475

Query: 533 IRINEPSKVNELLHKM---KEKKVMPDASIVSIVVDLLVK 569
            R ++ +K   +L ++   +++K  P +S V  +V+ L +
Sbjct: 476 ARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 169/573 (29%), Positives = 252/573 (43%), Gaps = 87/573 (15%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR------- 111
           P V ++  L+ +L K   +D        + A G  P+  T++ LI+  CK G        
Sbjct: 76  PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRV 135

Query: 112 -----------------------------VSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
                                        V L     G ++   FTP    FN +I G  
Sbjct: 136 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 195

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               +  A  L   +   GC PNV T+  LI GLC+      A  L E+M  G       
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG------ 249

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C PN VTYST+I+GLCK+G VD A  LF  M+  N  P+VVT+N LI GLC A    EA+
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP-NACTYNTLMDG 321
           +L+  M + G  P ++T+N ++D LCK+ ++DEA +L   + + GV   NA TY+TL  G
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G++  A  +F  +   G   D  +Y  LI  YCK     E + L  EM SKG  P 
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG--------------- 426
           V T + +  GLFE +  E A++LFD M   G   D   Y   ++G               
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLE 489

Query: 427 -----------------------LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
                                  LC+ G   +A +L   +        + +YN L+ GL 
Sbjct: 490 QVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLS 549

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +  R   A ++F ++      P + T N++I  LC+  ++D A +L   M +    PD+ 
Sbjct: 550 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 609

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           T + LI G+ +        +LL +M E  + P+
Sbjct: 610 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 642



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/454 (32%), Positives = 240/454 (52%), Gaps = 9/454 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN  T+  LI+G  +   +  A  L  ++K+ G E N + + TL+ GLC  G  + AL  
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
           F  MA         C P+ +TY+ ++  LCK G  D+A+ +  +M      PD VT+++L
Sbjct: 67  FRAMAKD-------CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC-KNRKMDEASRLLDLMVQRG 307
           I GLC      +A R+  +++ +G+  S   F  I+  LC K   ++ AS++L +++ +G
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P    +N +++GFC    ++ A +L   M   GC  +  ++ ILI G CK   V EA 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L  +MV+ G  P VVTY+T+  GL +  QV+ A +LF  M+R     +  T+   IDGL
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 299

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH-GVLVPN 486
           CK   I EA +L+  +R   C  DI  YN LIDGLCKS ++  A++LF ++P  GV   N
Sbjct: 300 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            VTY+ +  G    G+M  A  +F  + +   +PD+ T+  LI  + + +   +V EL+ 
Sbjct: 360 AVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVE 419

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +M  K   P  + +S V+  L +   + +++  F
Sbjct: 420 EMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 228/407 (56%), Gaps = 10/407 (2%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN  TY  LI G    G   IA+ L EEM + NG  G     N V ++T++ GLC  G
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS-NGFEG-----NAVVHTTLMKGLCDAG 58

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A   F  M  ++  PDV+TY +L+H LC A  ++EA+ +  EM+ +G  P  VTF+
Sbjct: 59  RVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFS 117

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC-LMGKINRAEELFGSMES 340
            ++D LCK    ++A R+L+ ++QRG+  +   + T++   C     +  A ++ G + +
Sbjct: 118 TLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIA 177

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G     + +N++ING+CK K+++ A  L   M+ KG  P V T+  L  GL + ++V  
Sbjct: 178 KGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGE 237

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A +L ++M   G + +  TY+T I+GLCK G + +A ELF+ +    C  ++  +N LID
Sbjct: 238 AQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 297

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA-AA 519
           GLCK+ R++ A +L+  +      P+++TYN +I GLC   Q+D+A  LF  + E+  +A
Sbjct: 298 GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 357

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVD 565
            + +T+  L HG+  +   +    +   + +K   PD A+  S++++
Sbjct: 358 ANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 233/479 (48%), Gaps = 45/479 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P +  +N++IN FCK   +   +     ++     PN  TF  LI GL   +R+ 
Sbjct: 177 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 236

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  L  K+   GC PNV+TY+T+INGLC+ G    A  LF+ M   N      C PN V
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN------CPPNVV 290

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T++ +IDGLCK   +++A+ L+ +M++    PD++TYNSLI GLC +   +EA +LF  +
Sbjct: 291 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 350

Query: 269 MDQGVQPS-VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC---- 323
            + GV  +  VT++ +        +M +A R+  ++V +G  P+  TY +L+  +C    
Sbjct: 351 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410

Query: 324 -------------------------LMGKI------NRAEELFGSMESMGCKHDDVSYNI 352
                                    ++G +       RA +LF SM + GC  D + YN+
Sbjct: 411 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 470

Query: 353 LINGYCKNKEVEEALSLYREMVSK---GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           ++ G  +  +  +AL++  +++ K      P+    + L   L ++ + + A +L  +M 
Sbjct: 471 VVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMS 530

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G AA   +Y   + GL +     EA ++F  +       +I   N +I  LC + ++ 
Sbjct: 531 ERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVD 590

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            A+EL   +      P++ T N +I G C  G+ D AR L  +M E    P+  T D+L
Sbjct: 591 DAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 180/386 (46%), Gaps = 52/386 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A+ +F  M R +  PP V + NIL+  L K K  +       R+  TG  P++ TYN 
Sbjct: 271 DDAYELFQLMERRN-CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 329

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           LI+  CK  +V   F  F  I  S  +  NA T+++L  G  A  R+ +A  +F+ L   
Sbjct: 330 LIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDK 389

Query: 161 GCEPNVITYNTLINGLCRTG-----------------------------------HTMIA 185
           G  P++ TY +LI   C+T                                    HT  A
Sbjct: 390 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 449

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM---KDENINPDV 242
           + LF+ MA         C  + + Y+ +++G+ +    +KA A+  Q+   +D   NP  
Sbjct: 450 IQLFDSMAARG------CTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSS 503

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
              ++L+  LC     ++AK+L  +M ++G   +V ++N ++  L + ++ DEA+++ + 
Sbjct: 504 SAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEA 563

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV  G  P   T N ++   C   K++ A EL   M  +GC  D  + N LI GYCK+  
Sbjct: 564 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 623

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTL 388
            + A  L  EM   G++P   T++ L
Sbjct: 624 ADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 254/517 (49%), Gaps = 25/517 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN--------ATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P + + N +L++LA++     + +        A  L PN YT+N+L++  C  G ++   
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                +     +P+A T+N+L+     +  + EA AL  ++K  G  P   TYNTL++  
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284

Query: 177 CRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            R G    A  + E M ANG        +P+  TY+ +  GLC+ G VD+A     ++KD
Sbjct: 285 ARLGWIKQATKVVEAMTANG-------FEPDLWTYNVLAAGLCQAGKVDEA----FRLKD 333

Query: 236 E-----NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           E      + PDVVTYN+L          ++A RL  EM ++GV+ ++VT N+++  LCK+
Sbjct: 334 EMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKD 393

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            +++ A   L+ M   G+ P+  TYNTL+   C  G I +A  L   M   G K D  + 
Sbjct: 394 GELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTL 453

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N ++   CK K  EEA  L +    +G  P  V+Y T+    F+ +  E AL+L+DEM  
Sbjct: 454 NTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIE 513

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
             +     TY T I GL + G + EA++    L       D   YN +I   CK G L+ 
Sbjct: 514 KKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLEN 573

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A++    +      P+VVT N ++ GLC +G++DKA  LF    E     DVIT++ LI 
Sbjct: 574 AFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQ 633

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
              +  +          M+ + + PDA   ++V+  L
Sbjct: 634 TMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 670



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/583 (26%), Positives = 250/583 (42%), Gaps = 109/583 (18%)

Query: 58  LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           LR+HP+     +FN+L+       +LA      + +   GL P+  TYN L+N  C+ G 
Sbjct: 198 LRLHPN---HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGM 254

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +        R+ +    P   T+N+L+        I +A  +   + A G EP++ TYN 
Sbjct: 255 LGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNV 314

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT------------------------ 207
           L  GLC+ G    A  L +EM      +  V   NT                        
Sbjct: 315 LAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK 374

Query: 208 ------VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
                 VT++ +I GLCK+G ++ A     +M D+ + PDV+TYN+LIH  C A +  +A
Sbjct: 375 GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKA 434

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS------------------------ 297
             L  EM+ +G++    T N ++  LCK ++ +EA                         
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAA 494

Query: 298 -----------RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
                      RL D M+++ + P+  TYNTL+ G   MG++  A +    +   G   D
Sbjct: 495 YFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPD 554

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           D +YNI+I+ YCK  ++E A   + +MV    KP VVT NTL  GL    +++ ALKLF+
Sbjct: 555 DTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFE 614

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
                G   D  TY T I  +CK+G +  A+  F  +     + D   YN ++  L ++G
Sbjct: 615 SWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674

Query: 467 RLKFAWELFCSLPHG----------VLVPNVV-------------------------TYN 491
           R + A  +   L             +L P+ V                          Y 
Sbjct: 675 RTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYT 734

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
            ++ GLC  GQ  +A+ +  +M +   + D  T+  L+ G ++
Sbjct: 735 KLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 50/285 (17%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKN---KHYDTRLNA---TGLFPNLYTYNILI 103
           A  ++D M+    +P  +S++N L+  L++    K    +LN     GL P+  TYNI+I
Sbjct: 504 ALRLWDEMIEKKLTPS-ISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIII 562

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +CK G +   F    +++ + F P+  T N+L+ GL    ++ +A  LF      G +
Sbjct: 563 HAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKK 622

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            +VITYNTLI  +C+ G    AL+ F +M A G        +P+  TY+ ++  L + G 
Sbjct: 623 VDVITYNTLIQTMCKDGDVDTALHFFADMEARG-------LQPDAFTYNVVLSALSEAGR 675

Query: 223 VDKAKALFLQM--------------------------KDENINPDVV---------TYNS 247
            ++A+ +  ++                          KD     + V          Y  
Sbjct: 676 TEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTK 735

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           L++GLC +  + EAK +  EMM +G+     T+  +M+ L K +K
Sbjct: 736 LVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 254/508 (50%), Gaps = 15/508 (2%)

Query: 57  MLRMHPSPPPVS-SFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCK 108
           M R   +PPP + S+N+++A L ++       K +D  ++  G+ PN  TYN +I+   K
Sbjct: 5   MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD-MGVVPNWITYNTMIDGHVK 63

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            G +  GF    ++L     PN  T+N L+ GL    R+ E   L  ++ +    P+  T
Sbjct: 64  GGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFT 123

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           Y+ L +GL RTG +   L+LF E       +G        T S +++GLCK+G V KA+ 
Sbjct: 124 YSILFDGLTRTGESRTMLSLFAESLKKGVMLG------AYTCSILLNGLCKDGKVAKAEQ 177

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +   +    + P  V YN+LI+G C   D   A  +F +M  + ++P  +T+N +++ LC
Sbjct: 178 VLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC 237

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K   + +A  L+  M + GV P+  T+NTL+D +   G++ +   +   M+  G K D +
Sbjct: 238 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 297

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           S+  ++  +CKN ++ EA+++  +M+ K + P    YN++     E    E A  L ++M
Sbjct: 298 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +  GV+A   TY   + GLC++  I EA EL  TLR      D+ +YN +I   C  G  
Sbjct: 358 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 417

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A EL   +    + P + TY+ ++  L + G++     L+  M      P    + ++
Sbjct: 418 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIM 477

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +  ++R    SKV  L  +M EK +  D
Sbjct: 478 VDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 13/304 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           AFCIF+ M   H  P  ++ +N L+  L K     K  D    +  +G+ P++ T+N LI
Sbjct: 210 AFCIFEQMKSRHIRPDHIT-YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +   G++   F     + +     +  +F S++K      +I EA A+   +      
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 328

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN   YN++I+    +G T  A  L E+M N           + VTY+ ++ GLC+   +
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG------VSASIVTYNLLLKGLCRSSQI 382

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A+ L   ++++ + PDVV+YN++I   C+  D ++A  L  EM   G++P++ T++ +
Sbjct: 383 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 442

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L    ++ +   L   M+ + V P++  Y  ++D +      ++   L   M   G 
Sbjct: 443 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502

Query: 344 KHDD 347
             DD
Sbjct: 503 AFDD 506



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 2/243 (0%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D  SYN++I G  ++ +  +AL ++ EMV  G+ P  +TYNT+  G  +   +E   +L 
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D+M  DG   +  TY   + GLC+ G + E   L   +       D   Y+ L DGL ++
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 466 GRLKFAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           G  +    LF  SL  GV++    T +I++ GLC DG++ KA  +   +      P  + 
Sbjct: 135 GESRTMLSLFAESLKKGVML-GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
           ++ LI+G+ ++ +      +  +MK + + PD    + +++ L K E+  K+    +  E
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 585 RQG 587
           + G
Sbjct: 254 KSG 256


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 267/531 (50%), Gaps = 14/531 (2%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN--------ATGLFPNLYT 98
           P+    IF+ M R+   P  ++   +L A +  N  +    +          G+ PN+ T
Sbjct: 154 PHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNT 213

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +NILI+ +C             ++      P+  T+N+++  L   S++ +   L  ++K
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMK 273

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  PN  TYN L++G C+      A  + E M  G G +     P+  TY+T++ GLC
Sbjct: 274 NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT-GKGML-----PDVWTYNTMVRGLC 327

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            EG +D+A  L  +M+   + PDVVTYN+LI G       + A +L  EM  +GV+ + V
Sbjct: 328 DEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGV 387

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N+++   C   K+DEAS ++  MV+ G  P+  TYNT+++G+C  GK+  A ++   M
Sbjct: 388 THNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM 447

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G K D  + N L++  C  K++++A +L  +   +G     VTY TL +G F+  Q 
Sbjct: 448 GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQA 507

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + ALKL++EM+  G+ A   TY T I GLC +G   +AV+    L       D    N +
Sbjct: 508 DRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNII 567

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G C  G ++ A++    +    L P++ T NI+++GLC +G ++K   LF        
Sbjct: 568 IHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGK 627

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             D +T++++I  F +        +L+ +M+ K + PD    + +V  L K
Sbjct: 628 PMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTK 678



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/470 (32%), Positives = 239/470 (50%), Gaps = 9/470 (1%)

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGL---HAESRIMEAAALFTKLKAFGCEPNVITYN 170
           LG   F ++ R  F PN  T N+L+  L   ++   ++ +  +F      G +PNV T+N
Sbjct: 156 LGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFN 215

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            LI+G C   +T  AL L  +M    GE G  C P+ VTY+T++  LCK   + + + L 
Sbjct: 216 ILIHGYCSDNNTEEALRLINQM----GEYG--CCPDNVTYNTVLTALCKRSQLTQVRDLL 269

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           LQMK+  + P+  TYN L+HG C      EA  +   M  +G+ P V T+N ++  LC  
Sbjct: 270 LQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDE 329

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K+DEA RL D M    + P+  TYNTL+DG       + A +L   M++ G K + V++
Sbjct: 330 GKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTH 389

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           NI+I  +C   +++EA ++  +MV  G  P   TYNT+  G  +  ++  A K+ DEM R
Sbjct: 390 NIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGR 449

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+  DT T  T +  +C    + +A  L    R     LD   Y  LI G  K  +   
Sbjct: 450 KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADR 509

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +L+  +    +V  ++TYN +I+GLC  G+ D+A D   ++ E    PD  T +++IH
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           G+       K  +  +KM E  + PD    +I++  L +  +  K L  F
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF 619



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 242/528 (45%), Gaps = 48/528 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N +L +L K            ++  +GLFPN  TYNIL++ +CK+  +      
Sbjct: 244 PDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEV 303

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  T+N++++GL  E +I EA  L  K+++F   P+V+TYNTLI+G   
Sbjct: 304 IELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFE 363

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVV--------C--------------------KPNTVT 209
              +  A  L EEM A G  E GV         C                     P+  T
Sbjct: 364 HRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFT 423

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T+I+G CK G + +A  +  +M  + +  D  T N+L+H +C     ++A  L ++  
Sbjct: 424 YNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKAR 483

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G     VT+  ++    K+ + D A +L + M + G+     TYNT++ G CL GK +
Sbjct: 484 KRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTD 543

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A +    +   G   D+ + NI+I+GYC    VE+A   + +MV   +KP + T N L 
Sbjct: 544 QAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILL 603

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL     +E  L LF+     G   DT TY   I   CK   + +A +L   +     E
Sbjct: 604 RGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLE 663

Query: 450 LDIQAYNCLIDGLCKSGR--------LKFAWELFCSLPHGVLVPNVVTYNIM----IQGL 497
            D   YN ++ GL K+GR        LKFA E    +      P + T ++M    I  L
Sbjct: 664 PDRYTYNAIVTGLTKAGRTEEAEKLALKFA-EKGQQVKTQDTSPELGTSDMMYSEQISSL 722

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           C  G+   A  LF   E+   + +  T+  L+ G ++  +      LL
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLL 770



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 153/375 (40%), Gaps = 87/375 (23%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS-----CFTPNA--------- 131
           ++  +G  P+ +TYN +IN +CK G+++  +     + R       FT N          
Sbjct: 411 KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEK 470

Query: 132 ---------------------ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
                                 T+ +LI G   + +   A  L+ ++K  G    +ITYN
Sbjct: 471 QLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYN 530

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           T+I GLC +G T  A++   E+     E G+V  P+  T + II G C EG V+KA    
Sbjct: 531 TIIRGLCLSGKTDQAVDKLNELL----EKGLV--PDESTSNIIIHGYCWEGAVEKAFQFH 584

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M + ++ PD+ T N L+ GLC      +   LF   + +G     VT+N+I+   CK 
Sbjct: 585 NKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKE 644

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGF---------------------------- 322
           R++++A  L+  M  + + P+  TYN ++ G                             
Sbjct: 645 RRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDT 704

Query: 323 ------------------CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
                             C  GK   A +LF   E  G   +  +Y  L++G  K ++  
Sbjct: 705 SPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSF 764

Query: 365 EALSLYREMVSKGIK 379
              SL   MVS  I+
Sbjct: 765 TTTSLLPFMVSATIQ 779


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 245/465 (52%), Gaps = 7/465 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y ++IN + +   ++L    F  ++ + F P +  FN L+  +   S   +  + F + K
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           +     +V ++  LI G C  G    + +L  E+     E G    PN V Y+T+IDG C
Sbjct: 157 S-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT----EFGF--SPNVVIYTTLIDGCC 209

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K+G ++KAK LF +M    +  +  TY  LI+GL       +   ++ +M + GV P++ 
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N +M++LCK+ +  +A ++ D M +RGV  N  TYNTL+ G C   K+N A ++   M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S G   + ++YN LI+G+C   ++ +ALSL R++ S+G+ P++VTYN L  G       
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A K+  EM+  G+     TYT  ID   ++  + +A++L  ++  L    D+  Y+ L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G C  G++  A  LF S+      PN V YN MI G C +G   +A  L  +MEE   
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           AP+V ++  +I    +  +  +   L+ KM +  + P  SI+S++
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 202/383 (52%), Gaps = 12/383 (3%)

Query: 67  VSSFNILLASLAK----NKHYDTRLNAT--GLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V SF IL+    +     K +D  +  T  G  PN+  Y  LI+  CK G +      F 
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + +     N  T+  LI GL       +   ++ K++  G  PN+ TYN ++N LC+ G
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG 282

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            T  A  +F+EM     E GV C  N VTY+T+I GLC+E  +++A  +  QMK + INP
Sbjct: 283 RTKDAFQVFDEMR----ERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++TYN+LI G C      +A  L  ++  +G+ PS+VT+N+++   C+      A++++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +RG++P+  TY  L+D F     + +A +L  SME +G   D  +Y++LI+G+C  
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ EA  L++ MV K  +P  V YNT+ LG  +      ALKL  EM+   +A +  +Y
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516

Query: 421 TTFIDGLCKNGYIIEAVELFRTL 443
              I+ LCK     EA  L   +
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKM 539



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 207/415 (49%), Gaps = 11/415 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL-----NATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P  + FN LL  +  +  ++        N + +  ++Y++ ILI   C+ G +   F   
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLL 186

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +    F+PN   + +LI G   +  I +A  LF ++   G   N  TY  LINGL + 
Sbjct: 187 IELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKN 246

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G       ++E+M     E GV   PN  TY+ +++ LCK+G    A  +F +M++  ++
Sbjct: 247 GVKKQGFEMYEKMQ----EDGVF--PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
            ++VTYN+LI GLC     NEA ++  +M   G+ P+++T+N ++D  C   K+ +A  L
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              +  RG+ P+  TYN L+ GFC  G  + A ++   ME  G K   V+Y ILI+ + +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           +  +E+A+ L   M   G+ P V TY+ L  G     Q+  A +LF  M       +   
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
           Y T I G CK G    A++L + +   +   ++ +Y  +I+ LCK  + K A  L
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 181/343 (52%), Gaps = 6/343 (1%)

Query: 75  ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
             + K K     +   GL  N  TY +LIN   K G    GF  + ++      PN  T+
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N ++  L  + R  +A  +F +++  G   N++TYNTLI GLCR      A  + ++M +
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                     PN +TY+T+IDG C  G + KA +L   +K   ++P +VTYN L+ G C 
Sbjct: 332 DG------INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
             D + A ++  EM ++G++PS VT+ +++D   ++  M++A +L   M + G+ P+  T
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y+ L+ GFC+ G++N A  LF SM    C+ ++V YN +I GYCK      AL L +EM 
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K + P V +Y  +   L +  + + A +L ++M   G+   T
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 171/321 (53%), Gaps = 14/321 (4%)

Query: 69  SFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           ++ +L+  L KN       + Y+ ++   G+FPNLYTYN ++N  CK GR    F  F  
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYE-KMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     + N  T+N+LI GL  E ++ EA  +  ++K+ G  PN+ITYNTLI+G C  G 
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL+L  ++ +          P+ VTY+ ++ G C++G    A  +  +M++  I P 
Sbjct: 354 LGKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY  LI     +++  +A +L + M + G+ P V T++V++   C   +M+EASRL  
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            MV++   PN   YNT++ G+C  G   RA +L   ME      +  SY  +I   CK +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527

Query: 362 EVEEALSLYREMVSKGIKPTV 382
           + +EA  L  +M+  GI P+ 
Sbjct: 528 KSKEAERLVEKMIDSGIDPST 548



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 204/409 (49%), Gaps = 7/409 (1%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           Y  +IN   ++    ++++ F EM + NG +     P +  ++ ++  +      ++  +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVD-NGFV-----PGSNCFNYLLTFVVGSSSFNQWWS 150

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
            F + K + +  DV ++  LI G C A +  ++  L IE+ + G  P+VV +  ++D  C
Sbjct: 151 FFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K  ++++A  L   M + G+  N  TY  L++G    G   +  E++  M+  G   +  
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN ++N  CK+   ++A  ++ EM  +G+   +VTYNTL  GL    ++  A K+ D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           + DG+  +  TY T IDG C  G + +A+ L R L+       +  YN L+ G C+ G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A ++   +    + P+ VTY I+I        M+KA  L L MEE    PDV T+ +L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           IHGF    + ++ + L   M EK   P+  I + ++    K   S ++L
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 181/377 (48%), Gaps = 1/377 (0%)

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I G     F   +  L    + E        Y  +I+    +   N +   F EM+D G
Sbjct: 65  VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P    FN ++  +  +   ++     +    + V  +  ++  L+ G C  G+I ++ 
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSF 183

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   +   G   + V Y  LI+G CK  E+E+A  L+ EM   G+     TY  L  GL
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F+    +   +++++MQ DGV  +  TY   ++ LCK+G   +A ++F  +R      +I
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI GLC+  +L  A ++   +    + PN++TYN +I G C  G++ KA  L  D
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           ++    +P ++T+++L+ GF R  + S   +++ +M+E+ + P     +I++D   +++ 
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423

Query: 573 SLKSLPSFLVQERQGEV 589
             K++   L  E  G V
Sbjct: 424 MEKAIQLRLSMEELGLV 440


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 239/464 (51%), Gaps = 7/464 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G  PN+  YN LI+ +CK G + +    F  +    F P   T+ ++I G   +    
Sbjct: 232 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 291

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
               L  ++ + G   NV  YNT+I+   + GH + A+   E      G I   CKP+ V
Sbjct: 292 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIE------GMIECGCKPDIV 345

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T+I G C++G V +A  L  Q   + + P+  +Y  LIH  C    ++ A    IEM
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 405

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            ++G +P +VT+  ++  L    ++D A  + + M++RGV P+A  YN LM G C   K+
Sbjct: 406 TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL 465

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ L   M       D   Y  L++G+ +N  ++EA  L+   + KG+ P +V YN +
Sbjct: 466 PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAM 525

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +   ++ A+   + M++  +A D  TY+T IDG  K   +  A ++FR +  +KC
Sbjct: 526 IKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKC 585

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + ++  Y  LI+G C+ G L  + ++F  +    LVPNVVTY+I+I   C + ++  A  
Sbjct: 586 KPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAAS 645

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
            F +M  N   P+ +TF+ L++GF + N    ++E  ++ +E K
Sbjct: 646 FFEEMLMNKCVPNDVTFNYLVNGFSK-NGTRAISEKGNEFQENK 688



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 233/498 (46%), Gaps = 63/498 (12%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC----FTPNAATFNSLIKGLH 142
           L   G  P + TY  +IN FCK G     F A  R+L        T N   +N++I   +
Sbjct: 265 LKLKGFLPTVETYGAIINGFCKKG----DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARY 320

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               I++A      +   GC+P+++TYNTLI+G CR G    A  L E+ A G G +   
Sbjct: 321 KHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQ-ALGKGLM--- 376

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
             PN  +Y+ +I   CK+G  D+A    ++M +    PD+VTY +L+HGL  A + + A 
Sbjct: 377 --PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 434

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            +  +M+++GV P    +N++M  LCK  K+  A  LL  M+ + V P+A  Y TL+DGF
Sbjct: 435 TIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGF 494

Query: 323 CLMGKINRAEELF-------------------------GSM-ESMGC------KH---DD 347
              G ++ A +LF                         G M ++M C      +H   D+
Sbjct: 495 IRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDE 554

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            +Y+ +I+GY K  +++ A  ++REMV    KP VVTY +L  G      +  +LK+F E
Sbjct: 555 FTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFRE 614

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           MQ  G+  +  TY+  I   CK   +I+A   F  + + KC  +   +N L++G  K+G 
Sbjct: 615 MQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGT 674

Query: 468 LKFAWE--------------LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
              + +               F  +      P    YN ++  LC  G    A  L   M
Sbjct: 675 RAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKM 734

Query: 514 EENAAAPDVITFDMLIHG 531
                 PD ++F  L+HG
Sbjct: 735 TSKGCIPDSVSFVALLHG 752



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 255/539 (47%), Gaps = 18/539 (3%)

Query: 54  FDYMLRMHPSPPPVS-SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           FD++ R   S P    +++ LL  LA+++ +         +    + P     +I+I  +
Sbjct: 80  FDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAY 139

Query: 107 CKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
              G V      +  +L++  + P+    NSL+  L    RI  A  L+ ++       +
Sbjct: 140 SDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGD 199

Query: 166 --VITYNT--LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             V  Y+T  ++ GLC+ G       L E+        G  C PN + Y+T+IDG CK+G
Sbjct: 200 RCVDNYSTCIMVKGLCKEGKLEEGRKLIED------RWGQGCIPNIIFYNTLIDGYCKKG 253

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A  LF+++K +   P V TY ++I+G C   D+    RL +EM  +G+  +V  +N
Sbjct: 254 DMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYN 313

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+D   K+  + +A   ++ M++ G +P+  TYNTL+ G C  GK++ A++L       
Sbjct: 314 TIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK 373

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   +  SY  LI+ YCK    + A +   EM  +G KP +VTY  L  GL    +V+ A
Sbjct: 374 GLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVA 433

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L + ++M   GV  D   Y   + GLCK   +  A  L   +       D   Y  L+DG
Sbjct: 434 LTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDG 493

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             ++G L  A +LF       + P +V YN MI+G C  G M  A      M++   APD
Sbjct: 494 FIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPD 553

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             T+  +I G+++ ++     ++  +M + K  P+    + +++   +     +SL  F
Sbjct: 554 EFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIF 612



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 179/387 (46%), Gaps = 26/387 (6%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+  L+ +  K   YD        +   G  P+L TY  L++     G V +    
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTI 436

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L     P+A  +N L+ GL  + ++  A  L  ++      P+   Y TL++G  R
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIR 496

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A  LFE       E G+   P  V Y+ +I G CK G +  A A   +MK  ++
Sbjct: 497 NGNLDEARKLFELTI----EKGM--NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  TY+++I G    +D + A+++F EM+    +P+VVT+  +++  C+   +  + +
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M   G+ PN  TY+ L+  FC   K+  A   F  M    C  +DV++N L+NG+ 
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670

Query: 359 KN---------KEVEEA-----LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
           KN          E +E      L+ +  M+S G  P    YN++ + L +      AL+L
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNG 431
            ++M   G   D+ ++   + G+C  G
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHGVCLEG 757



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 153/362 (42%), Gaps = 64/362 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++  L+  L      D  L         G+FP+   YNIL++  CK  ++    + 
Sbjct: 412 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L     P+A  + +L+ G      + EA  LF      G  P ++ YN +I G C+
Sbjct: 472 LAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCK 531

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+     M   +        P+  TYST+IDG  K+  +D A+ +F +M     
Sbjct: 532 FGMMKDAMACINRMKKRH------LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKC 585

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTY SLI+G C   D + + ++F EM   G+ P+VVT+++++   CK  K+ +A+ 
Sbjct: 586 KPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAAS 645

Query: 299 LLDLMVQRGVRPNACTYNTLMDGF------------------------------------ 322
             + M+     PN  T+N L++GF                                    
Sbjct: 646 FFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWA 705

Query: 323 -------------CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC---KNKEVEEA 366
                        C  G    A +L   M S GC  D VS+  L++G C   ++KE +  
Sbjct: 706 PRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNI 765

Query: 367 LS 368
           +S
Sbjct: 766 VS 767



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 44/308 (14%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P +  YN +I  +CK G +        R+ +    P+  T++++I G   +  +  A
Sbjct: 514 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 573

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM---------ANGNGEIGV 201
             +F ++    C+PNV+TY +LING CR G    +L +F EM            +  IG 
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633

Query: 202 VCK--------------------PNTVTYSTIIDGLCKEG----------FVDKAKALFL 231
            CK                    PN VT++ +++G  K G          F +  +++FL
Sbjct: 634 FCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFL 693

Query: 232 ----QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
               +M  +   P    YNS++  LC    +  A +L  +M  +G  P  V+F  ++  +
Sbjct: 694 NFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGV 753

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C   +  E   ++   +       A  Y++++D +   G  + A  +  +M      H  
Sbjct: 754 CLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQG-TSEASVILQTMFEECQSHSK 812

Query: 348 VSYNILIN 355
           V  NI ++
Sbjct: 813 VGDNIQVS 820


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 258/511 (50%), Gaps = 13/511 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  F  L+ +LA+       L        + L P++  YN+ I+CF K G V + +  F 
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  ++ S+I  L    R+ EA  LF +++A    P    YNT+I G    G
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L E +          C P+ V++++I+  L K+  VD+A +LF  MK ++  P
Sbjct: 334 RFEDAYKLLERLRERG------CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 386

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  TYN +I  LC      EA R+  EM    + P+++T N+++D LCK RK++EA ++ 
Sbjct: 387 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 446

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +   QRG  P+  TY +L+DG    G+++ A  LF  M   G   + V Y  LI  +  +
Sbjct: 447 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 506

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+   +++E++ +G KP +   NT    +F+  +VE    +F++++  G   D R+Y
Sbjct: 507 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 566

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GL K G   E   +F  ++     LD +AYN ++DG CKSG++  A+E+   +  
Sbjct: 567 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 626

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P V TY  ++ GL    ++D+A  LF + +      +V+ +  LI GF ++    +
Sbjct: 627 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 686

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L +M +K + P+    + ++D LVK E
Sbjct: 687 AYLILEEMMKKGLTPNVYTWNSLLDALVKAE 717



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 259/531 (48%), Gaps = 13/531 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N+ +    K  + D        L A GL P+  +Y  +I   CK GR+      
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 306

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++      P A  +N++I G  +  R  +A  L  +L+  GC P+V+++N+++  L +
Sbjct: 307 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 366

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+LFE M           +PN+ TY+ IID LC  G V++A  +  +M+  ++
Sbjct: 367 KRKVDEALSLFEVMKKD-------AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 419

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+++T N ++  LC A    EA ++F     +G  P  VT+  ++D L K  ++DEA R
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 479

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M+  G   N   Y +L+  F + G+     ++F  +   GCK D    N  ++   
Sbjct: 480 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVF 539

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  EVE+   ++ ++ S G  P V +Y+ L  GL +  Q      +F  M++ G A D R
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 599

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   +DG CK+G + +A E+   ++    +  +  Y  ++DGL K  RL  A+ LF   
Sbjct: 600 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 659

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  NVV Y+ +I G    G++D+A  +  +M +    P+V T++ L+   ++  E 
Sbjct: 660 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 719

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           ++       MKE K  P+    SI+++ L + +   K+   +   ++QG V
Sbjct: 720 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 770



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 261/544 (47%), Gaps = 30/544 (5%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF-----PNLYTYNILINCFCKIGRV 112
           LR     P V SFN +L  L K +  D  L+   +      PN  TYNI+I+  C  GRV
Sbjct: 345 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRV 404

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
              +     +  +   PN  T N ++  L    ++ EA  +F      GC P+ +TY +L
Sbjct: 405 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 464

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+GL + G    A  LFE+M +           N V Y+++I      G  +    +F +
Sbjct: 465 IDGLGKKGQVDEAYRLFEKMLDAGH------NANPVVYTSLIRNFFIHGRKEDGHKIFKE 518

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +      PD+   N+ +  +  A +  + + +F ++   G  P V ++++++  L K  +
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             E S +   M Q+G   +A  YN ++DGFC  GK+++A E+   M+    +    +Y  
Sbjct: 579 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 638

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +++G  K   ++EA  L+ E  SKGI+  VV Y++L  G  ++ +++ A  + +EM + G
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +  T+ + +D L K   I EA+  F++++ +KC  +   Y+ LI+GLC+  +   A+
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             +  +    LVPNVVTY  MI GL   G +  A  LF   + N   PD  +F+ LI G 
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 818

Query: 533 IRIN---EPSKVNE----------------LLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
              N   E  +V E                LL  + + + +  A+IV  V+  + K++ +
Sbjct: 819 SNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLREIAKSQHA 878

Query: 574 LKSL 577
            +SL
Sbjct: 879 SRSL 882



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 244/480 (50%), Gaps = 7/480 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           RL   G  P++ ++N ++ C  K  +V      F  +++    PN++T+N +I  L    
Sbjct: 344 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGG 402

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R+ EA  +  +++     PN++T N +++ LC+      A  +FE  A+  G     C P
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRG-----CNP 456

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY ++IDGL K+G VD+A  LF +M D   N + V Y SLI          +  ++F
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIF 516

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            E++ +G +P +   N  MD + K  ++++   + + +   G  P+  +Y+ L+ G    
Sbjct: 517 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 576

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+      +F +M+  G   D  +YN +++G+CK+ +V +A  +  EM  K ++PTV TY
Sbjct: 577 GQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATY 636

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             +  GL +I +++ A  LF+E +  G+  +   Y++ IDG  K G I EA  +   +  
Sbjct: 637 GAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMK 696

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++  +N L+D L K+  +  A   F S+      PN  TY+I+I GLC   + +K
Sbjct: 697 KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNK 756

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A   + DM++    P+V+T+  +I G  ++   +    L  + K    +PDA+  + +++
Sbjct: 757 AFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 816



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 209/477 (43%), Gaps = 43/477 (9%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN A  + L   L    R+ +A      ++     P    Y  LI  L        AL L
Sbjct: 143 PNQACAH-LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 201

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E+GV        ++T++  L +EG V  A AL  ++K   + PD+V YN  
Sbjct: 202 LRQMQEVGYEVGVHL------FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 255

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I     A + + A + F E+  QG++P  V++  ++  LCK  ++ EA  L   M     
Sbjct: 256 IDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 315

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P A  YNT++ G+   G+   A +L   +   GC    VS+N ++    K ++V+EALS
Sbjct: 316 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 375

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L+ E++ K  +P   TYN +   L    +VE A ++ DEM+   +  +  T    +D LC
Sbjct: 376 LF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 434

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K   + EA ++F +     C  D   Y  LIDGL K G++  A+ LF  +       N V
Sbjct: 435 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 494

Query: 489 TY-----NIMIQGLCND------------------------------GQMDKARDLFLDM 513
            Y     N  I G   D                              G+++K R +F D+
Sbjct: 495 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 554

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                 PDV ++ +LIHG  +  +  + + + H MK++    DA   + VVD   K+
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 115/262 (43%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E++   M  +G    + +   L     + + +++A+     M     +P    Y  L   
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L E  + E AL+L  +MQ  G       +TT +  L + G + +A+ L   ++    E D
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN  ID   K+G +  AW+ F  L    L P+ V+Y  MI  LC  G++ +A +LF 
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            ME   + P    ++ +I G+          +LL +++E+  +P     + ++  L K  
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368

Query: 572 ISLKSLPSFLVQERQGEVGESN 593
              ++L  F V ++  E   S 
Sbjct: 369 KVDEALSLFEVMKKDAEPNSST 390



 Score = 46.2 bits (108), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 67/161 (41%)

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
           H +    K+ +EM   G     +        L +   + +AV     +R LK      AY
Sbjct: 123 HDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAY 182

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LI  L ++ R + A EL   +        V  +  +++ L  +GQ+  A  L  +++ 
Sbjct: 183 TVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG 242

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +   PD++ +++ I  F +        +  H++K + + PD
Sbjct: 243 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPD 283


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 262/511 (51%), Gaps = 13/511 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  F  L+ +LA+    +  L        + L P++  YN+ I+CF K G V + +  F 
Sbjct: 211 VPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFH 270

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  ++ S++  L    R+ EA  LF +++A    P    YNT+I G     
Sbjct: 271 ELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L E +          C P+ V++++I+  L K+  VD+A  LF  MK ++  P
Sbjct: 331 RFDDAYKLLERLRERG------CIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKP 383

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++ TYN +I  LC A   NEA ++  EM   G+ P++++ N+++D LCK  +++EA R+ 
Sbjct: 384 NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIF 443

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +   +RG  PN+ TY +L+DG    GKI+ A  LF  M   G   + + Y  LI  +  +
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMH 503

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+   +Y+EM+ +G +P +   NT    +F+  +VE    +F++M+  G   D R+Y
Sbjct: 504 GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSY 563

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GL K G   E   +F+ +      LD +AYN ++DGLCKSG++  A+E+   +  
Sbjct: 564 SILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKV 623

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P V TY  ++ GL    ++D+A  LF + +      +VI +  LI GF ++    +
Sbjct: 624 KHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDE 683

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L +M +K + P+    + ++D LVK E
Sbjct: 684 AYLILEEMMKKGLTPNVYTWNSLMDALVKTE 714



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 249/501 (49%), Gaps = 7/501 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L A GL P+  +Y  ++   CK GR+      FG++      P A  +N++I G  +  R
Sbjct: 272 LKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAER 331

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  L  +L+  GC P+V+++N+++  L +      AL LF+ M           KPN
Sbjct: 332 FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKD-------AKPN 384

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ IID LC  G V++A  +  +M+   + P++++ N ++  LC AN   EA R+F 
Sbjct: 385 ISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFE 444

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
              ++G  P+ VT+  ++D L K  K+D+A RL + M+  G   N   Y +L+  F + G
Sbjct: 445 SASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG 504

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +     +++  M   G + D    N  ++   K  EVE+  +++ +M S G  P V +Y+
Sbjct: 505 RKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYS 564

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GL +  Q      +F  M + G A D R Y   +DGLCK+G + +A E+   +++ 
Sbjct: 565 ILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
                +  Y  ++DGL K  RL  A+ LF       +  NV+ Y+ +I G    G++D+A
Sbjct: 625 HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +  +M +    P+V T++ L+   ++  E  +       MKE K  P+    SI+++ 
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILING 744

Query: 567 LVKNEISLKSLPSFLVQERQG 587
           L + +   K+   +   ++QG
Sbjct: 745 LCRVQKYNKAFVFWQEMQKQG 765



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 252/519 (48%), Gaps = 11/519 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF-----PNLYTYNILINCFCKIGRV 112
           LR     P V SFN +L  L K +  D  L    +      PN+ TYNI+I+  C  GRV
Sbjct: 342 LRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRV 401

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
           +  +     +  +   PN  + N ++  L   +++ EA  +F      GC PN +TY +L
Sbjct: 402 NEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSL 461

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+GL + G    A  LFE+M +   +       N + Y+++I      G  +    ++ +
Sbjct: 462 IDGLGKKGKIDDAYRLFEKMLDAGHD------ANPIIYTSLIRNFFMHGRKEDGHKIYKE 515

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M      PD+   N+ +  +  A +  + + +F +M   G  P V ++++++  L K  +
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             E S +   M Q+G   +A  YN ++DG C  GK+++A E+   M+         +Y  
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +++G  K   ++EA  L+ E  SKGI+  V+ Y++L  G  ++ +++ A  + +EM + G
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +  T+ + +D L K   I EA+  F++++ +KC  +   Y+ LI+GLC+  +   A+
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 755

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             +  +    L+PNVVTY  MI GL   G +  A  LF   + N   PD  +F+ LI G 
Sbjct: 756 VFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGM 815

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              N P +  ++  + + +    +      ++D L K E
Sbjct: 816 SNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTE 854



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 252/507 (49%), Gaps = 13/507 (2%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N ++      + +D       RL   G  P++ ++N ++ C  K  +V      
Sbjct: 314 PCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTL 373

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +++    PN +T+N +I  L    R+ EA  +  +++  G  PN+++ N +++ LC+
Sbjct: 374 FD-VMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCK 432

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  +FE  A+  G     C PN+VTY ++IDGL K+G +D A  LF +M D   
Sbjct: 433 ANQLEEAHRIFES-ASERG-----CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH 486

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + + + Y SLI          +  +++ EM+ +G +P +   N  MD + K  ++++   
Sbjct: 487 DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRA 546

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M   G  P+  +Y+ L+ G    G+      +F +M   G   D  +YN +++G C
Sbjct: 547 IFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLC 606

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+ +V++A  +  EM  K + PTV TY ++  GL +I +++ A  LF+E +  G+  +  
Sbjct: 607 KSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVI 666

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y++ IDG  K G I EA  +   +       ++  +N L+D L K+  +  A   F S+
Sbjct: 667 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSM 726

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PN  TY+I+I GLC   + +KA   + +M++    P+V+T+  +I G  ++   
Sbjct: 727 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNI 786

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD 565
           +    L  + K    +PD++  + +++
Sbjct: 787 TDAYSLFERFKTNGGIPDSASFNALIE 813



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 182/402 (45%), Gaps = 14/402 (3%)

Query: 150 AAALFTKLKAFGCEP-NVITYNTLINGLCRTGHTMIAL-NLFEEMAN-GNGEIGVVCKPN 206
           AA  F    A   +P     YN ++  L    H + AL  + EEM++ G G     C   
Sbjct: 91  AAPFFLLASASSSQPLPPDAYNAVLPFL---SHDLAALEKVLEEMSHLGYGLPNPAC--- 144

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
               + ++  L +   ++ A  +   M+     P    Y  LI  L  A     A  L  
Sbjct: 145 ----AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLR 200

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M D G + SV  F  ++  L +  +M+ A  L+D +    + P+   YN  +D F   G
Sbjct: 201 QMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 260

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A + F  +++ G + DDVSY  ++   CK   + EA  L+ +M ++   P    YN
Sbjct: 261 SVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYN 320

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+ +G     + + A KL + ++  G      ++ + +  L K   + EA+ LF  ++  
Sbjct: 321 TMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-K 379

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + +I  YN +ID LC +GR+  A+++   +    L PN+++ NIM+  LC   Q+++A
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA 439

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             +F    E    P+ +T+  LI G  +  +      L  KM
Sbjct: 440 HRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 132/256 (51%), Gaps = 13/256 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A+ + + M   H  P  V+++  ++  LAK    D          + G+  N+  Y+ 
Sbjct: 612 DKAYEVLEEMKVKHVHPT-VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ F K+GR+   ++    +++   TPN  T+NSL+  L     I EA   F  +K   
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK 730

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN  TY+ LINGLCR      A   ++EM       G++  PN VTY+T+I GL K G
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ----GLI--PNVVTYTTMISGLAKVG 784

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +  A +LF + K     PD  ++N+LI G+ +AN   EA ++F E   +G + +V T  
Sbjct: 785 NITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCI 844

Query: 282 VIMDELCKNRKMDEAS 297
            ++D L K   +++A+
Sbjct: 845 SLLDALNKTECLEQAA 860



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 2/230 (0%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E++   M  +G    + +   L+    +++ +E+A  +   M     +P    Y  L   
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L E  Q E AL+L  +MQ  G       +TT +  L + G +  A+ L   ++    E D
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN  ID   K+G +  AW+ F  L    L P+ V+Y  M+  LC  G++ +A +LF 
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            ME     P    ++ +I G+          +LL +++E+  +P  S+VS
Sbjct: 306 QMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIP--SVVS 353


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 262/519 (50%), Gaps = 12/519 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCF 106
           +F  M+      P V + + LL  L K +H+   +       + G+ P++Y Y  +I   
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C++  +S        +  +    N   +N LI GL  + ++ EA  +   L     +P+V
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TY TL+ GLC+     I L + +EM      + +   P+    S++++GL K G +++A
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGKIEEA 351

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L  ++ D  ++P++  YN+LI  LC    ++EA+ LF  M   G++P+ VT+++++D 
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            C+  K+D A   L  MV  G++ +   YN+L++G C  G I+ AE     M +   +  
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+Y  L+ GYC   ++ +AL LY EM  KGI P++ T+ TL  GLF    +  A+KLF+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           EM    V  +  TY   I+G C+ G + +A E  + +       D  +Y  LI GLC +G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +   A      L  G    N + Y  ++ G C +G++++A  +  +M +     D++ + 
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +LI G ++  +      LL +M ++ + PD  I + ++D
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 244/489 (49%), Gaps = 14/489 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +    L P + T + L++   K     L    F  ++     P+   +  +I+ L     
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A  +   ++A GC+ N++ YN LI+GLC+      A+ + +++A      G   KP+
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA------GKDLKPD 296

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDE----NINPDVVTYNSLIHGLCHANDWNEAK 262
            VTY T++ GLCK     +   + L+M DE      +P     +SL+ GL       EA 
Sbjct: 297 VVTYCTLVYGLCKV----QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            L   ++D GV P++  +N ++D LCK RK  EA  L D M + G+RPN  TY+ L+D F
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  GK++ A    G M   G K     YN LING+CK  ++  A     EM++K ++PTV
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY +L  G     ++  AL+L+ EM   G+A    T+TT + GL + G I +AV+LF  
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +     + +   YN +I+G C+ G +  A+E    +    +VP+  +Y  +I GLC  GQ
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
             +A+     + +     + I +  L+HGF R  +  +   +  +M ++ V  D     +
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652

Query: 563 VVDLLVKNE 571
           ++D  +K++
Sbjct: 653 LIDGSLKHK 661



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/595 (28%), Positives = 276/595 (46%), Gaps = 90/595 (15%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------G 91
           +E +I +   +E  C     LR  PS   VSS   L+  L K    +  LN        G
Sbjct: 311 QEFEIGLEMMDEMLC-----LRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFG 362

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PNL+ YN LI+  CK  +     + F R+ +    PN  T++ LI       ++  A 
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           +   ++   G + +V  YN+LING C+ G    A     EM N   E      P  VTY+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE------PTVVTYT 476

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           +++ G C +G ++KA  L+ +M  + I P + T+ +L+ GL  A    +A +LF EM + 
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            V+P+ VT+NV+++  C+   M +A   L  M ++G+ P+  +Y  L+ G CL G+ + A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL--- 388
           +     +    C+ +++ Y  L++G+C+  ++EEALS+ +EMV +G+   +V Y  L   
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656

Query: 389 ---------FLGLF-EIHQ----------------------VEHALKLFDEMQRDGVAAD 416
                    F GL  E+H                        + A  ++D M  +G   +
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLR-----------------ILKCELDIQ------ 453
             TYT  I+GLCK G++ EA  L   ++                 + K E+D+Q      
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776

Query: 454 ------------AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                        YN LI G C+ GR++ A EL   +    + P+ +TY  MI  LC   
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            + KA +L+  M E    PD + ++ LIHG     E  K  EL ++M  + ++P+
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 247/515 (47%), Gaps = 12/515 (2%)

Query: 67  VSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           +  +N+L+  L K +           L    L P++ TY  L+   CK+    +G     
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +L   F+P+ A  +SL++GL    +I EA  L  ++  FG  PN+  YN LI+ LC+  
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  LF+ M    G+IG+  +PN VTYS +ID  C+ G +D A +   +M D  +  
Sbjct: 382 KFHEAELLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V  YNSLI+G C   D + A+    EM+++ ++P+VVT+  +M   C   K+++A RL 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  +G+ P+  T+ TL+ G    G I  A +LF  M     K + V+YN++I GYC+ 
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ +A    +EM  KGI P   +Y  L  GL    Q   A    D + +     +   Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  + G C+ G + EA+ + + +     +LD+  Y  LIDG  K    K  + L   +  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+ V Y  MI      G   +A  ++  M      P+ +T+  +I+G  +    ++
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
              L  KM+    +P+       +D+L K E+ ++
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 181/396 (45%), Gaps = 41/396 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P + +F  LL+ L +        +A  LF         PN  TYN++I  +C+ G +S  
Sbjct: 505 PSIYTFTTLLSGLFRAGLIR---DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F     +      P+  ++  LI GL    +  EA      L    CE N I Y  L++G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVC-----------------------------KPN 206
            CR G    AL++ +EM     ++ +VC                             KP+
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+++ID   K G   +A  ++  M +E   P+ VTY ++I+GLC A   NEA+ L  
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M      P+ VT+   +D L K     + +  L   + +G+  N  TYN L+ GFC  G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I  A EL   M   G   D ++Y  +IN  C+  +V++A+ L+  M  KGI+P  V YN
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           TL  G     ++  A +L +EM R G+  + +T  T
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 56/302 (18%)

Query: 342 GCKHDDVSYNILING--------------------------------------------- 356
           G  H   S+ ILI+                                              
Sbjct: 99  GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158

Query: 357 -------YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
                  Y +++ V + + +++ M++K  + P V T + L  GL +      A++LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  D   YT  I  LC+   +  A E+   +    C+++I  YN LIDGLCK  ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A  +   L    L P+VVTY  ++ GLC   + +   ++  +M     +P       L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
           + G  +  +  +   L+ ++ +  V P+  + + ++D L K     K   + L+ +R G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR---KFHEAELLFDRMGK 395

Query: 589 VG 590
           +G
Sbjct: 396 IG 397


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 266/542 (49%), Gaps = 47/542 (8%)

Query: 65  PPVSSFNILLASLAK----NKHYDTR--LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +   LL+SL K     K Y+    +   G+ P+++ ++ +IN FCK  R       
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++ +    PN  T+N++I GL    R+ EA     K+      P++ITY+  INGL +
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  + +EM+    E+G V  PN V Y+T+IDG CK G + +A  +   M  + I
Sbjct: 339 LEKIDEANCVLKEMS----ELGFV--PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGI 392

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC---------- 288
           +P+ VT NSLI G C ++   +A+ +  EM+ +G+  +  +F+++++ LC          
Sbjct: 393 SPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALH 452

Query: 289 -------------------------KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                                    K  K  EA  L   ++ +G  PN  T N L+ G C
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLC 512

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G +    +L   M   G   D ++YN LI+G CK  +V+E   L  EMV KGI+P + 
Sbjct: 513 KAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIY 572

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+N L  GL    +++ A +L+ E +++G   +  TY   IDG CK   + E   L   L
Sbjct: 573 TFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNEL 632

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
              K EL+   YN LI   C +G +  A+ L   +    ++ +  TY+ ++ GLCN G +
Sbjct: 633 VSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLV 692

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A+ L  +M +    P+V+ +  +I G+ ++ + +KVN +L +M    + P+    +I+
Sbjct: 693 DDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIM 752

Query: 564 VD 565
           +D
Sbjct: 753 ID 754



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 156/519 (30%), Positives = 250/519 (48%), Gaps = 36/519 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA+   + M++   SP  ++ +++ +  L K +  D        ++  G  PN   YN 
Sbjct: 308 DEAYRFKEKMVKEKVSPSLIT-YSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNT 366

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ +CK+G +S        +L    +PN+ T NSLI+G     +I +A  +  ++   G
Sbjct: 367 LIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------------ANGNGE-I 199
              N  +++ +IN LC     + AL+   EM                     A   GE +
Sbjct: 427 LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAV 486

Query: 200 GVVCK-------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
            + C+       PN VT + +I GLCK G + +   L   M +  +  D +TYN+LI G 
Sbjct: 487 ELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGC 546

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      E   L  EM+ +G+QP + TFN+++  LC   K+DEASRL     + G  PN 
Sbjct: 547 CKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNV 606

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY  ++DG+C   K+   E L   + S   + + V YN LI  YC N  +  A  L  +
Sbjct: 607 YTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDD 666

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M S+G+  +  TY++L  GL  I  V+ A  L DEM+++G+  +   YTT I G  K G 
Sbjct: 667 MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQ 726

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + +   + + +       +   Y  +IDG CK G+ K A +L   +    ++P+ VTYN 
Sbjct: 727 MNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNA 786

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
              GLC +G++++A  +  +M   A   D IT+  LI G
Sbjct: 787 FTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 240/461 (52%), Gaps = 12/461 (2%)

Query: 111 RVSLGFIA--FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            +  GF A  F  + +    P+  T   L+  L   + + ++  ++  +   G  P+V  
Sbjct: 199 HLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHL 258

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           ++T+IN  C+      A+ LF +M     ++GV   PN VTY+ II GLCK G +D+A  
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKME----KLGVA--PNVVTYNNIIHGLCKSGRLDEAYR 312

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
              +M  E ++P ++TY+  I+GL      +EA  +  EM + G  P+ V +N ++D  C
Sbjct: 313 FKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYC 372

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K   + EA ++ D M+ +G+ PN+ T N+L+ GFC   +I +AE +   M   G   +  
Sbjct: 373 KMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQG 432

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           S++++IN  C       AL   REM+ + ++P      TL  GL +  +   A++L+  +
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRL 492

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G   +  T    I GLCK G + E ++L R +       D   YN LI G CK G++
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           K  +EL   +    + P++ T+N+++ GLCN  ++D+A  L+ + ++N   P+V T+ ++
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVM 612

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           I G+ + N+  +   LL+++  KK+     + S+V + L++
Sbjct: 613 IDGYCKANKVEEGENLLNELVSKKL----ELNSVVYNSLIR 649



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 107/206 (51%)

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A  ++  +  KG+ P++ T   L   L + ++++ + +++D +   G+  D   ++T I+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
             CK     +A+ LF  +  L    ++  YN +I GLCKSGRL  A+     +    + P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +++TY++ I GL    ++D+A  +  +M E    P+ + ++ LI G+ ++   S+  ++ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNE 571
             M  K + P++  ++ ++    K++
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSD 410


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 280/570 (49%), Gaps = 20/570 (3%)

Query: 11   FSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSF 70
            FS  S    + + +FS LL     L+    +  +I+  EA  +F + LR     P   S 
Sbjct: 469  FSAFSLSSPSLKHDFSYLL-----LSVLLNESKMIS--EAADLF-FALRNEGIFPSSDSL 520

Query: 71   NILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
             +LL  L K K +   +N       +   P+ + Y   I    K+  V  G   F R+  
Sbjct: 521  TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 580

Query: 125  SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               +P    +N LI GL    ++ +A  LF ++ A    P++ITYNTLI+G C+ G+   
Sbjct: 581  DRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEK 640

Query: 185  ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
            +  + E M   N E      P+ +T++T++ GL K G V+ A+ +  +MKD+   PD  T
Sbjct: 641  SFKVRERMKADNIE------PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFT 694

Query: 245  YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            ++ L  G    +  + A  ++   +D G++ +  T +++++ LCK  ++++A  +L   +
Sbjct: 695  FSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREM 754

Query: 305  QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             +G+ PN   YNT++DG+   G +  A     +ME  G K D ++YN LI  +C+  ++E
Sbjct: 755  AKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDME 814

Query: 365  EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
             A     +M  KG+ P+V TYN L  G    ++ +    L  EM+ +G   +  +Y T I
Sbjct: 815  NAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLI 874

Query: 425  DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            + LCK   ++EA  + R +       +++ YN LIDG C  G+++ A+     +    + 
Sbjct: 875  NCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIE 934

Query: 485  PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
             N+VTYN +I GL  +G++ +A D+ L++      PDV T++ LI G+       +   L
Sbjct: 935  LNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIAL 994

Query: 545  LHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
              +MK   + P      +++ L  K  I L
Sbjct: 995  YEEMKTSGIKPTLKTYHLLISLCTKEGIEL 1024



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 254/539 (47%), Gaps = 47/539 (8%)

Query: 65   PPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
            P V  +N+L+  L K +        +D  L A  L P+L TYN LI+ +CK G     F 
Sbjct: 585  PTVFIYNVLIDGLCKVRQMKDAEQLFDEML-ARRLLPSLITYNTLIDGYCKDGNPEKSFK 643

Query: 118  AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               R+      P+  TFN+L+KGL     + +A  + T++K  G  P+  T++ L +G  
Sbjct: 644  VRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYS 703

Query: 178  RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                   AL ++E   +         K N  T S +++ LCKEG ++KA+ +  +   + 
Sbjct: 704  SNDKADAALGVYETAVDSG------LKMNAYTCSILLNALCKEGQIEKAEEILGREMAKG 757

Query: 238  INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
            + P+ V YN++I G     D   A+     M  QG++P  + +N ++   C+   M+ A 
Sbjct: 758  LVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAE 817

Query: 298  RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            + ++ M  +GV P+  TYN L+ G+    + ++  +L   ME  G   + VSY  LIN  
Sbjct: 818  QEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCL 877

Query: 358  CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            CK  ++ EA  + R+M  +G+ P V  YN L  G     ++E A +  +EM + G+  + 
Sbjct: 878  CKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNL 937

Query: 418  RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             TY T IDGL  NG + EA ++   +     + D+  YN LI G   +G ++    L+  
Sbjct: 938  VTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997

Query: 478  LPHGVLVPNVVTYNIMIQGLCND--------------------------------GQMDK 505
            +    + P + TY+++I  LC                                  G MDK
Sbjct: 998  MKTSGIKPTLKTYHLLIS-LCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDK 1056

Query: 506  ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A +L   M E +   D  T++ LI G +++ +  +V  L+ +MK +++ P+A    I+V
Sbjct: 1057 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 235/499 (47%), Gaps = 24/499 (4%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P   +F+IL    + N   D  L        +GL  N YT +IL+N  CK G++      
Sbjct: 690  PDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEI 749

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             GR +     PN   +N++I G   +  ++ A      ++  G +P+ + YN LI   C 
Sbjct: 750  LGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCE 809

Query: 179  TGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
             G          +M N   E+  +      P+  TY+ +I G  ++   DK   L  +M+
Sbjct: 810  LG----------DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859

Query: 235  DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            D    P+VV+Y +LI+ LC  +   EA+ +  +M D+GV P+V  +N+++D  C   K++
Sbjct: 860  DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 295  EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            +A R  + M ++G+  N  TYNTL+DG  + GK+  AE++   +   G K D  +YN LI
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979

Query: 355  NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            +GY     V+  ++LY EM + GIKPT+ TY+ L + L     +E   K+F EM    + 
Sbjct: 980  SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTKEGIELTKKIFGEMS---LQ 1035

Query: 415  ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
             D   Y   +     +G + +A  L + +      LD   YN LI G  K G+L     L
Sbjct: 1036 PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 1095

Query: 475  FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
               +    + P   TY+I+++G C       A   + +M+E     DV   D L+ G   
Sbjct: 1096 IDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKE 1155

Query: 535  INEPSKVNELLHKMKEKKV 553
                 +   ++ +M  +K+
Sbjct: 1156 EWRSKEAENVISEMNGRKL 1174



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 245/520 (47%), Gaps = 19/520 (3%)

Query: 47   PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
            P ++F + + M +     P + +FN LL  L K    +      T +   G  P+ +T++
Sbjct: 638  PEKSFKVRERM-KADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFS 696

Query: 101  ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            IL + +    +       +   + S    NA T + L+  L  E +I +A  +  +  A 
Sbjct: 697  ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK 756

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            G  PN + YNT+I+G  R G  + A    + M           KP+ + Y+ +I   C+ 
Sbjct: 757  GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG------MKPDHLAYNCLIRTFCEL 810

Query: 221  GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
            G ++ A+    +MK + ++P V TYN LI G     ++++   L  EM D G  P+VV++
Sbjct: 811  GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870

Query: 281  NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
              +++ LCK  K+ EA  +   M  RGV PN   YN L+DG C  GKI  A      M  
Sbjct: 871  GTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFK 930

Query: 341  MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
             G + + V+YN LI+G   N ++ EA  +  E+  KG+KP V TYN+L  G      V+ 
Sbjct: 931  KGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQR 990

Query: 401  ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLI 459
             + L++EM+  G+    +TY   I  LC      E +EL + +   +  + D+  YN ++
Sbjct: 991  CIALYEEMKTSGIKPTLKTYHLLI-SLCTK----EGIELTKKIFGEMSLQPDLLVYNGVL 1045

Query: 460  DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
                  G +  A+ L   +    +  +  TYN +I G    G++ + R L  +M+     
Sbjct: 1046 HCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREME 1105

Query: 520  PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            P+  T+D+++ G   + +         +M+EK ++ D  I
Sbjct: 1106 PEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCI 1145



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 155/338 (45%), Gaps = 18/338 (5%)

Query: 54   FDYMLRMHP--SPPPVSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINC 105
            FD +  M    + P V S+  L+  L K             +   G+ PN+  YN+LI+ 
Sbjct: 852  FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911

Query: 106  FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
             C  G++   F     + +     N  T+N+LI GL    ++ EA  +  ++   G +P+
Sbjct: 912  CCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPD 971

Query: 166  VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
            V TYN+LI+G    G+    + L+EEM           KP   TY  +I    KEG ++ 
Sbjct: 972  VFTYNSLISGYRFAGNVQRCIALYEEMKTSG------IKPTLKTYHLLISLCTKEG-IEL 1024

Query: 226  AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
             K +F +M   ++ PD++ YN ++H      D ++A  L  +M+++ +     T+N ++ 
Sbjct: 1025 TKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLIL 1081

Query: 286  ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
               K  K+ E   L+D M  R + P A TY+ ++ G C M     A   +  M+  G   
Sbjct: 1082 GQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLL 1141

Query: 346  DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            D    + L++G  +    +EA ++  EM  + +   +V
Sbjct: 1142 DVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIV 1179



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 3/242 (1%)

Query: 332 EELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +ELF   S+ S   KHD  SY +L     ++K + EA  L+  + ++GI P+  +   L 
Sbjct: 466 KELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLL 524

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L +  Q    + +F  +           Y   I    K   + + +ELF  ++  +  
Sbjct: 525 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIS 584

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  YN LIDGLCK  ++K A +LF  +    L+P+++TYN +I G C DG  +K+  +
Sbjct: 585 PTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKV 644

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M+ +   P +ITF+ L+ G  +         +L +MK++  +PDA   SI+ D    
Sbjct: 645 RERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSS 704

Query: 570 NE 571
           N+
Sbjct: 705 ND 706


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 250/502 (49%), Gaps = 21/502 (4%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP    ++++L +  ++  +         ++A G   +    N+++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++       +  ++N+++KGL    R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 176 LCRTGHTMIALNLFE---EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           LCR G       LFE   E+     E G  C P+   Y+TIIDG+CKEG ++ A  +  +
Sbjct: 261 LCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    + P+VV YN+++ GLC A  W EA+ L  EM  +      VTFN+++D  C+N  
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D    LL+ M+  G  P+  TY T+++GFC  G I+ A  L  SM S GCK + VSY I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++ G C      +A  L  +M+ +G  P  VT+NTL   L +   VE A++L  +M  +G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
            + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   L + GR+    
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F ++    +  + V YN +I  LC   + D+A D F  M  N   P+  T+ MLI G 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 533 IRINEPSKVNELLHKMKEKKVM 554
                  +  ELL ++  +  +
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 251/522 (48%), Gaps = 20/522 (3%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP   +F  ++  L         L         G  P    Y++++   C+ G    G
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSG----G 161

Query: 116 FIAFGRILRSCF----TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           F    R+L +      T +    N ++  +  +  + EA  L  KL  FGCE ++++YN 
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++ GLC          L +EM      + V C PN VT++T+I  LC+ G  ++   +  
Sbjct: 222 VLKGLCMAKRWGDVEELMDEM------VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM +    PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +  EA  LL  M Q+    +  T+N L+D FC  G ++R  EL   M S GC  D ++Y 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+CK   ++EA+ L + M S G KP  V+Y  +  GL    +   A +L  +M + 
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+ + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            EL   + +  + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I  
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
             +  E  +  +    M     MP+ S  ++++  L    ++
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 241/508 (47%), Gaps = 46/508 (9%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            YN ++  +C+ G+++        +      PNA TF  +++GL    RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDG 216
              GC P    Y+ ++   CR+G    ++ + E M A G       C  +T   + +++ 
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNA 190

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + + L  EM+     P+
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250

Query: 277 VVTFNV-----------------------------------IMDELCKNRKMDEASRLLD 301
           +VTFN                                    I+D +CK   ++ A+ +L+
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G++PN   YNT++ G C   +   AEEL   M    C  DDV++NIL++ +C+N 
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V+  + L  +M+S G  P V+TY T+  G  +   ++ A+ L   M   G   +T +YT
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GLC  G  ++A EL   +    C  +   +N LI+ LCK G ++ A EL   +   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++++Y+ +I GL   G+ ++A +L   M     +P+ I +  +     R    +KV
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++   +K+  +  DA + + V+  L K
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCK 578



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 3/258 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            YN ++ G+C  G++  A        ++    +  ++  ++ G C    + +AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARR---LAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KG  P    Y+ +           +++++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EAV L R L    CE DI +YN ++ GLC + R     EL   +      PN+VT+N +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  LC +G  ++  ++   M E+   PD+  +  +I G  +       NE+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 554 MPDASIVSIVVDLLVKNE 571
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 250/502 (49%), Gaps = 21/502 (4%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP    ++++L +  ++  +         ++A G   +    N+++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++       +  ++N+++KGL    R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 176 LCRTGHTMIALNLFE---EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           LCR G       LFE   E+     E G  C P+   Y+TIIDG+CKEG ++ A  +  +
Sbjct: 261 LCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    + P+VV YN+++ GLC A  W EA+ L  EM  +      VTFN+++D  C+N  
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D    LL+ M+  G  P+  TY T+++GFC  G I+ A  L  SM S GCK + VSY I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++ G C      +A  L  +M+ +G  P  VT+NTL   L +   VE A++L  +M  +G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
            + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   L + GR+    
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F ++    +  + V YN +I  LC   + D+A D F  M  N   P+  T+ MLI G 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 533 IRINEPSKVNELLHKMKEKKVM 554
                  +  ELL ++  +  +
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 251/522 (48%), Gaps = 20/522 (3%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP   +F  ++  L         L         G  P    Y++++   C+ G    G
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSG----G 161

Query: 116 FIAFGRILRSCF----TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           F    R+L +      T +    N ++  +  +  + EA  L  KL  FGCE ++++YN 
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++ GLC          L +EM      + V C PN VT++T+I  LC+ G  ++   +  
Sbjct: 222 VLKGLCMAKRWGDVEELMDEM------VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM +    PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +  EA  LL  M Q+    +  T+N L+D FC  G ++R  EL   M S GC  D ++Y 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+CK   ++EA+ L + M S G KP  V+Y  +  GL    +   A +L  +M + 
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+ + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            EL   + +  + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I  
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
             +  E  +  +    M     MP+ S  ++++  L    ++
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 241/508 (47%), Gaps = 46/508 (9%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            YN ++  +C+ G+++        +      PNA TF  +++GL    RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDG 216
              GC P    Y+ ++   CR+G    ++ + E M A G       C  +T   + +++ 
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNA 190

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + + L  EM+     P+
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250

Query: 277 VVTFNV-----------------------------------IMDELCKNRKMDEASRLLD 301
           +VTFN                                    I+D +CK   ++ A+ +L+
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G++PN   YNT++ G C   +   AEEL   M    C  DDV++NIL++ +C+N 
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V+  + L  +M+S G  P V+TY T+  G  +   ++ A+ L   M   G   +T +YT
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GLC  G  ++A EL   +    C  +   +N LI+ LCK G ++ A EL   +   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++++Y+ +I GL   G+ ++A +L   M     +P+ I +  +     R    +KV
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++   +K+  +  DA + + V+  L K
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCK 578



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 3/258 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            YN ++ G+C  G++  A  L  ++       +  ++  ++ G C    + +AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KG  P    Y+ +           +++++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EAV L R L    CE DI +YN ++ GLC + R     EL   +      PN+VT+N +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  LC +G  ++  ++   M E+   PD+  +  +I G  +       NE+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 554 MPDASIVSIVVDLLVKNE 571
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 250/502 (49%), Gaps = 21/502 (4%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP    ++++L +  ++  +         ++A G   +    N+++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++       +  ++N+++KGL    R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 176 LCRTGHTMIALNLFE---EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           LCR G       LFE   E+     E G  C P+   Y+TIIDG+CKEG ++ A  +  +
Sbjct: 261 LCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    + P+VV YN+++ GLC A  W EA+ L  EM  +      VTFN+++D  C+N  
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D    LL+ M+  G  P+  TY T+++GFC  G I+ A  L  SM S GCK + VSY I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++ G C      +A  L  +M+ +G  P  VT+NTL   L +   VE A++L  +M  +G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
            + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   L + GR+    
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F ++    +  + V YN +I  LC   + D+A D F  M  N   P+  T+ MLI G 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 533 IRINEPSKVNELLHKMKEKKVM 554
                  +  ELL ++  +  +
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 251/522 (48%), Gaps = 20/522 (3%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP   +F  ++  L         L         G  P    Y++++   C+ G    G
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSG----G 161

Query: 116 FIAFGRILRSCF----TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           F    R+L +      T +    N ++  +  +  + EA  L  KL  FGCE ++++YN 
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++ GLC          L +EM      + V C PN VT++T+I  LC+ G  ++   +  
Sbjct: 222 VLKGLCMAKRWGDVEELMDEM------VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM +    PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +  EA  LL  M Q+    +  T+N L+D FC  G ++R  EL   M S GC  D ++Y 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+CK   ++EA+ L + M S G KP  V+Y  +  GL    +   A +L  +M + 
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+ + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            EL   + +  + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I  
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
             +  E  +  +    M     MP+ S  ++++  L    ++
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 241/508 (47%), Gaps = 46/508 (9%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            YN ++  +C+ G+++        +      PNA TF  +++GL    RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDG 216
              GC P    Y+ ++   CR+G    ++ + E M A G       C  +T   + +++ 
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNA 190

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + + L  EM+     P+
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250

Query: 277 VVTFNV-----------------------------------IMDELCKNRKMDEASRLLD 301
           +VTFN                                    I+D +CK   ++ A+ +L+
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G++PN   YNT++ G C   +   AEEL   M    C  DDV++NIL++ +C+N 
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V+  + L  +M+S G  P V+TY T+  G  +   ++ A+ L   M   G   +T +YT
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GLC  G  ++A EL   +    C  +   +N LI+ LCK G ++ A EL   +   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++++Y+ +I GL   G+ ++A +L   M     +P+ I +  +     R    +KV
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++   +K+  +  DA + + V+  L K
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCK 578



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 3/258 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            YN ++ G+C  G++  A  L  ++       +  ++  ++ G C    + +AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KG  P    Y+ +           +++++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EAV L R L    CE DI +YN ++ GLC + R     EL   +      PN+VT+N +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  LC +G  ++  ++   M E+   PD+  +  +I G  +       NE+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 554 MPDASIVSIVVDLLVKNE 571
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 264/536 (49%), Gaps = 72/536 (13%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRV--SLGF 116
           P   +FN+L+ SL ++   D       +++  G  PN +T  IL+  FC+ GR   +L F
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEF 208

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +  G++  +    N   +N+L+     +    EA  L  ++   G  P+V+T+N+ I+ L
Sbjct: 209 VD-GKMGGNV---NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISAL 264

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR G    A  +F +M   +GE+G+  KPN VT++ ++ G C+EG +++A++L   MK  
Sbjct: 265 CRAGKVFEASRIFRDMQM-DGELGLP-KPNVVTFNLMLKGFCQEGMMEEARSLVETMKKG 322

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
                + +YN+ + GL       E + +  EM++ G++P++ ++N++MD LC+N  M +A
Sbjct: 323 GNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDA 382

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI---------------------------- 328
            RL+DLMV  GV P+  TY TL+ G+C  GK+                            
Sbjct: 383 RRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNS 442

Query: 329 -------NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK-- 379
                  + AEE+   M     + D V+ NI++NG C+N E+E+A  +  EM + G    
Sbjct: 443 LWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSL 502

Query: 380 --------------------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
                               P V+TY TL  GL ++ ++E A K F EM    +  D+ T
Sbjct: 503 GKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVT 562

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y TF+   CK G I  A+ + + +    C   +Q YN LI GL   G++   + L   + 
Sbjct: 563 YDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMR 622

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFDMLIHGFIR 534
              + P++ TYN MI  LC  G+   A  L  +M ++   +P+V +F +LI  F +
Sbjct: 623 ERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCK 678



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 226/457 (49%), Gaps = 34/457 (7%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  ++++   P   TFN LI+ L   + +  A  LF K+   GC+PN  T   L+ G CR
Sbjct: 139 YTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCR 198

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  AL   +    GN         N V Y+T++   CK+   D+A+ L  +M ++ +
Sbjct: 199 AGRTKQALEFVDGKMGGN--------VNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGL 250

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG----VQPSVVTFNVIMDELCKNRKMD 294
            PDVVT+NS I  LC A    EA R+F +M   G     +P+VVTFN+++   C+   M+
Sbjct: 251 LPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMME 310

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L++ M + G   +  +YNT + G    GK+     +   M   G + +  SYNI++
Sbjct: 311 EARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVM 370

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G C+N  + +A  L   MVS G+ P  VTY TL  G     +V  A  + +EM R G  
Sbjct: 371 DGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCH 430

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +T T  T ++ L K G   EA E+ + +     +LD    N +++GLC++G L+ A E+
Sbjct: 431 PNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEV 490

Query: 475 FCSLP--------------------HGVL--VPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
              +                     H V   VP+V+TY  +I GLC  G++++A+  F++
Sbjct: 491 VSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIE 550

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           M      PD +T+D  +  F +  + S    +L  M+
Sbjct: 551 MMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDME 587



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 245/582 (42%), Gaps = 118/582 (20%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N L++S  K    D       R+   GL P++ T+N  I+  C+ G+V        RI 
Sbjct: 222 YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKV----FEASRIF 277

Query: 124 RSCF--------TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           R            PN  TFN ++KG   E  + EA +L   +K  G   ++ +YNT + G
Sbjct: 278 RDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLG 337

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L R G  +   ++ +EM     E G+  +PN  +Y+ ++DGLC+   +  A+ L   M  
Sbjct: 338 LLRNGKLLEGRSVLDEMV----ENGI--EPNIYSYNIVMDGLCRNHMMLDARRLMDLMVS 391

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + PD VTY +L+HG C      EAK +  EM+ +G  P+  T N +++ L K  +  E
Sbjct: 392 NGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSE 451

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH---------- 345
           A  +L  M ++  + +  T N +++G C  G++ +A E+   M + G             
Sbjct: 452 AEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGL 511

Query: 346 ------------DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
                       D ++Y  LING CK  ++EEA   + EM++K + P  VTY+T  L   
Sbjct: 512 VNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFC 571

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  ++  AL++  +M+R+G +   +TY + I GL   G I E   L   +R      DI 
Sbjct: 572 KQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDIC 631

Query: 454 AYN----CLIDG--------------------------------LCKSGRLKFAWELF-- 475
            YN    CL +G                                 CKSG  K A ELF  
Sbjct: 632 TYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDV 691

Query: 476 ---------------------------------CSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
                                             SL   +L  N + Y  +I  LC DG+
Sbjct: 692 ALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM-YEDLIDKLCKDGR 750

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           +D A  L   + +     D  +F  +I G  +     + +EL
Sbjct: 751 LDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 6/310 (1%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L+ +M+  GV P   TFN+++  LC++  +D A  L D M ++G +PN  T   L+ GFC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+  +A E       MG   + V YN L++ +CK    +EA  L   M  KG+ P VV
Sbjct: 198 RAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA----DTRTYTTFIDGLCKNGYIIEAVEL 439
           T+N+    L    +V  A ++F +MQ DG       +  T+   + G C+ G + EA  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
             T++     + +++YN  + GL ++G+L     +   +    + PN+ +YNI++ GLC 
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           +  M  AR L   M  N   PD +T+  L+HG+    +  +   +L++M  K   P+   
Sbjct: 376 NHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYT 435

Query: 560 VSIVVDLLVK 569
            + +++ L K
Sbjct: 436 CNTLLNSLWK 445



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 208/454 (45%), Gaps = 58/454 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY-DTR-----LNATGLFPNLYTYNIL 102
           E   + D M+  +   P + S+NI++  L +N    D R     + + G++P+  TY  L
Sbjct: 346 EGRSVLDEMVE-NGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTL 404

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ +C  G+V         ++R    PN  T N+L+  L  E R  EA  +  K+     
Sbjct: 405 LHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSY 464

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIG---------------VVCKPN 206
           + + +T N ++NGLCR G    A  +  EM  +G   +G                   P+
Sbjct: 465 QLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPD 524

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +TY+T+I+GLCK G +++AK  F++M  +N++PD VTY++ +   C     + A R+  
Sbjct: 525 VITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLK 584

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M   G   ++ T+N ++  L    ++ E   L+D M +RG+ P+ CTYN +++  C  G
Sbjct: 585 DMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGG 644

Query: 327 KINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLY--------------- 370
           K   A  L   M   G    +VS + ILI  +CK+ + + A  L+               
Sbjct: 645 KTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYS 704

Query: 371 ---------------REMVSKGIKPTVVTYNTLFLGLFEI----HQVEHALKLFDEMQRD 411
                          +E+    ++ ++++ N ++  L +      +++ A  L  ++   
Sbjct: 705 LMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDK 764

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           G   D  ++   IDGL K G   +A EL R + +
Sbjct: 765 GYCFDHSSFIPVIDGLSKRGNKQQADELGRIMEL 798



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 6/247 (2%)

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L+  M   G   +  ++N+LI   C++  ++ A  L+ +M  KG +P   T   L  G  
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              + + AL+  D   + G   +   Y T +   CK     EA +L   +       D+ 
Sbjct: 198 RAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPH----GVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +N  I  LC++G++  A  +F  +      G+  PNVVT+N+M++G C +G M++AR L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M++      + +++  + G +R  +  +   +L +M E  + P+    +IV+D L +
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 570 NEISLKS 576
           N + L +
Sbjct: 376 NHMMLDA 382



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LI  LC+S  L  A ELF  +      PN  T  I+++G C  G+  +A + F+D 
Sbjct: 153 TFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALE-FVDG 211

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
           +       V+ ++ L+  F + +   +  +L+ +M EK ++PD    +  +  L +    
Sbjct: 212 KMGGNVNRVV-YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKV 270

Query: 574 LKSLPSFLVQERQGEVG 590
            ++   F   +  GE+G
Sbjct: 271 FEASRIFRDMQMDGELG 287



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 38/82 (46%)

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +  R  +   L+  +    + P   T+N++IQ LC    +D AR+LF  M E    P+  
Sbjct: 128 QQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKF 187

Query: 524 TFDMLIHGFIRINEPSKVNELL 545
           T  +L+ GF R     +  E +
Sbjct: 188 TVGILVRGFCRAGRTKQALEFV 209


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 255/513 (49%), Gaps = 15/513 (2%)

Query: 49  EAFCIFDYMLRMHPSP-PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNI 101
           +A  + D M R   +P PP+  ++++L +  +   + +       L+A G   ++   N+
Sbjct: 177 DALAVLDEMPRRGCAPIPPM--YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNL 234

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  C  G V         +      P+  ++N+++KGL    R      L  ++    
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 294

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN++T+NTLI+ LCR G       +  +M          C P+   Y+TIIDG+CKEG
Sbjct: 295 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHG------CTPDIRMYATIIDGICKEG 348

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A  +  +M    + P+VV YN+L+ GLC A  W E + L  EM D+      VTFN
Sbjct: 349 HLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 408

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  C+N  +D    LL+ M++ G  P+  TY T+++GFC  G I+ A  L  SM + 
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 468

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GCK + +SY I++ G C  +   +A  L  +M+ +G     +T+NTL   L +   VE A
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++L  +M  +G + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L + GR+    ++F ++    +  + V YN +I  LC  G+ ++A +    M  +   P+
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 648

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             T+ +LI G        +  E+L ++  K  +
Sbjct: 649 ESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 251/514 (48%), Gaps = 22/514 (4%)

Query: 62  PSPP-PVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP   + F ++ A  A+ +  D       +   G  P    Y++++   C+ G    G
Sbjct: 154 PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGG----G 209

Query: 116 FIAFGRIL-----RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           F +  R+L     R C   +    N ++  +  +  + EA  L   L +FGCEP+V++YN
Sbjct: 210 FRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYN 268

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            ++ GLC          L EEM      + + C PN VT++T+I  LC+ G  ++   + 
Sbjct: 269 AVLKGLCMAKRWGCVQELMEEM------VRMACPPNIVTFNTLISYLCRNGLFERVHEVL 322

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            QM +    PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC  
Sbjct: 323 AQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSA 382

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            + +E   LL  M  +    +  T+N L+D FC  G ++R  EL   M   GC  D ++Y
Sbjct: 383 ERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITY 442

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             +ING+CK   ++EA+ L + M + G KP  ++Y  +  GL    +   A  L  +M +
Sbjct: 443 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 502

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+   
Sbjct: 503 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 562

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A EL   + +  + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I 
Sbjct: 563 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 622

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              +  E  +  E L  M     +P+ S  +I++
Sbjct: 623 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 656



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 238/503 (47%), Gaps = 9/503 (1%)

Query: 70  FNILLASLAKNKHYDT--RLNAT-GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           +N ++A   +    ++  RL A   + PN YTY  ++   C  GR++        + R  
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             P    ++ +++          A  +   L A GC  +V   N ++N +C  G    AL
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L  ++ +        C+P+ V+Y+ ++ GLC        + L  +M      P++VT+N
Sbjct: 250 HLLRDLPSFG------CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 303

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LI  LC    +     +  +M++ G  P +  +  I+D +CK   ++ A  +L+ M   
Sbjct: 304 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 363

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G++PN   YNTL+ G C   +    EEL   M    C  DDV++NIL++ +C+N  V+  
Sbjct: 364 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 423

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + L  +M+  G  P V+TY T+  G  +   ++ A+ L   M   G   +T +YT  + G
Sbjct: 424 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 483

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC     ++A +L   +    C L+   +N LI+ LCK G ++ A EL   +      P+
Sbjct: 484 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +++Y+ +I GL   G+ D+A +L   M     +P+ I +  +     R    +KV ++  
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            +++  +  DA + + V+  L K
Sbjct: 604 NIQDTTIRSDAVLYNAVISSLCK 626



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 194/432 (44%), Gaps = 26/432 (6%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G E   +  ++LI  LC  G T  A         G            V Y+ ++ G C+ 
Sbjct: 90  GGEGGSVRLSSLIRSLCAAGRTAEAARALSAAGGGA---------GVVAYNAMVAGYCRA 140

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G ++ A+ L   +    + P+  TY  ++  LC      +A  +  EM  +G  P    +
Sbjct: 141 GQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMY 197

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           +VI++  C+      A R+L+ +  RG   +    N +++  C  G ++ A  L   + S
Sbjct: 198 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS 257

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL-----GLFE- 394
            GC+ D VSYN ++ G C  K       L  EMV     P +VT+NTL       GLFE 
Sbjct: 258 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 317

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           +H+V        +M   G   D R Y T IDG+CK G++  A E+   +     + ++  
Sbjct: 318 VHEV------LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 371

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+ GLC + R +   EL   +       + VT+NI++   C +G +D+  +L   M 
Sbjct: 372 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 431

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE--I 572
           E+   PDVIT+  +I+GF +     +   LL  M      P+    +IV+  L   E  +
Sbjct: 432 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 491

Query: 573 SLKSLPSFLVQE 584
             + L S ++Q+
Sbjct: 492 DAEDLMSQMIQQ 503


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 258/517 (49%), Gaps = 23/517 (4%)

Query: 64  PPPVSSFNILLASL---AKNKHYDTRL----NATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P   S+F ++L  L   AK +H    L       GL P+    N ++   C     +   
Sbjct: 7   PSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAM 66

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F + +      N  T+ +LI  L     + EA  L   +K+ G  P  + +N +I GL
Sbjct: 67  ALFDK-MAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGL 125

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR G    AL ++ +M + +        P+ +TY+ ++ GL K G +  A  +  +M   
Sbjct: 126 CRAGRLRHALGVYRQMNDAH-------PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD  T   ++  LC  +  ++A+ L  EM+ +G+  + +T++ ++D LCK  ++DEA
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238

Query: 297 -SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            + LL  + +RG  P+  TY+T++DG C  G++  A ++F   E M C    ++YN LI 
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIG 295

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           GYC+  +++EA+ L  +MV     P V+TY TL     ++ +++ A +LF +M  + ++ 
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  T+T+ +DGLC  G + +A+EL   +    C   I  YNC++DG CKS +++ A EL 
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELV 415

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP---DVITFDMLIHGF 532
                   VPN VTYNI++ G C  G+ D+A   +LD   +   P    V  + +++   
Sbjct: 416 ADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ-YLDQLNSEGGPCPTSVAMYAIILDAL 474

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            R        +   +M ++  +P A+  + VV  L K
Sbjct: 475 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 511



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 223/466 (47%), Gaps = 13/466 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G+ P    +N++I   C+ GR+      + R +     P+  T+  L+ GL    R
Sbjct: 106 MKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKAGR 164

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A  +  ++ +    P+  T   ++  LC       A  L EEM +           N
Sbjct: 165 LRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG------MAAN 218

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFL-QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
            +TYS ++DGLCK   +D+A AL L ++      PD+VTY+++I GLC A    +A  +F
Sbjct: 219 AITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 278

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM      P+ +T+N ++   C+   MDEA RLL  MV     P+  TY TLM  FC M
Sbjct: 279 EEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKM 335

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+++ A ELF  M +     D V++  L++G C    +E+AL L  E+  +G  PT+ TY
Sbjct: 336 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 395

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +  G  + +QV  A +L  + +  G   +T TY   + G C+ G   +A++    L  
Sbjct: 396 NCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 455

Query: 446 L--KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C   +  Y  ++D LC+ GR   A + +  +     VP   T+  ++  LC   Q 
Sbjct: 456 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 515

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
            +A +L  +M +    P   T D ++  + R     K +EL  +++
Sbjct: 516 QQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 186/358 (51%), Gaps = 12/358 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G+  N  TY+ L++  CK  R+     +  G + R  FTP+  T++++I GL    R+ +
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F ++    C P  ITYN+LI G CR G    A+ L  +M + N      C P+ +T
Sbjct: 274 AVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN------CAPDVIT 324

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++   CK G +D A  LF QM    ++PDVVT+ SL+ GLC      +A  L  E+ 
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P++ T+N ++D  CK+ ++ +A  L+     RG  PN  TYN L+ G C  G+ +
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 330 RAEELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +A +    + S G  C      Y I+++  C++   ++A+  Y EM+ +G  P   T+ T
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 504

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           +   L + HQ + A +L +EM + G      T    +   C+ G I +A EL   LR+
Sbjct: 505 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 3/235 (1%)

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEE-ALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           M   G   D  ++ +++ G   + ++      L  E+  +G+ P  V  NT+   L +  
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
               A+ LFD+M   G A +  TY   I  LCK   + EA+ L   ++          +N
Sbjct: 61  DTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +I GLC++GRL+ A  ++  + +    P+ +TY  ++ GL   G++  A  +  +M   
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              PD  T  +++      +      EL+ +M  + +  +A   S +VD L K E
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 233


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/521 (31%), Positives = 254/521 (48%), Gaps = 44/521 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGR---VSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           R+    L PNL T N LIN   +      V L    F  +++     N  TFN LI G  
Sbjct: 164 RMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCC 223

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            E+++ EA  L  K+K F C P+ ++YNT+++ LC+ G    A +L  +M N NG +   
Sbjct: 224 IENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-NGLL--- 279

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
             PN  T++ ++ G CK G++ +A  +   M   N+ PDV TYN LI GLC     +EA 
Sbjct: 280 --PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           RL  EM +  + P VVT+N +++         +   L+D M  +GV+PNA TYN ++  +
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWY 397

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              GK++ A      ME  G   D V++N LINGYCK   + EA  +  EM  KG+K   
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 383 VT-----------------------------------YNTLFLGLFEIHQVEHALKLFDE 407
           VT                                   Y TL +G F+  +   A+KL+DE
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+   +     TY T I GLC +G   ++++    L       D   YN +I G C+ G+
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQ 577

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A++    +      P++ T NI+++GLC +G +DKA  LF        A D +T++ 
Sbjct: 578 VEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNT 637

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +I G  + +   +  +LL +M+EKK+ PD    + ++  L 
Sbjct: 638 IISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 271/558 (48%), Gaps = 53/558 (9%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK---------NKHYDTRLNATGLFPNLY 97
           P+ A  IF+ M R+H  P  ++  N L+ +L +         +K   + +   G+  N  
Sbjct: 155 PHHAAQIFNRMKRLHLKPNLLTC-NTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTN 213

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILR-SCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           T+NILI   C   ++S      G++   SCF P+  ++N+++  L  + ++ EA  L   
Sbjct: 214 TFNILIYGCCIENKLSEAIGLIGKMKDFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLD 272

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +K  G  PN  T+N L++G C+ G    A  + + MA  N        P+  TY+ +I G
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN------VLPDVWTYNMLIGG 326

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK+G +D+A  L  +M++  + PDVVTYN+LI+G    +   +   L  +M  +GV+P+
Sbjct: 327 LCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPN 386

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            VT+NV++    K  KMD A   L  M + G  P+  T+NTL++G+C  G+++ A  +  
Sbjct: 387 AVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMD 446

Query: 337 SMESMGCKH-----------------------------------DDVSYNILINGYCKNK 361
            M   G K                                    D+VSY  LI GY K+ 
Sbjct: 447 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDG 506

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +  EA+ L+ EM  K I P+++TYNT+  GL    + + ++   +E+   G+  D  TY 
Sbjct: 507 KSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYN 566

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I G C+ G + +A +    +     + D+   N L+ GLC  G L  A +LF +    
Sbjct: 567 TIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISK 626

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
               + VTYN +I GLC + + ++A DL  +MEE    PD  T++ ++          + 
Sbjct: 627 GKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEA 686

Query: 542 NELLHKMKEKKVMPDASI 559
            E + ++ E+  + D +I
Sbjct: 687 EEFMSRIVEQGKLQDQTI 704



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 246/534 (46%), Gaps = 70/534 (13%)

Query: 65  PPVSSFNILLASLAK----NKHYDTRLNA--TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+N +L  L K    N+  D  L+    GL PN  T+NIL++ +CK+G +      
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + ++   P+  T+N LI GL  + +I EA  L  +++     P+V+TYNTLING   
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              ++    L ++M       G   KPN VTY+ ++    KEG +D A     +M++   
Sbjct: 365 CSSSLKGFELIDKME------GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 418

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD VT+N+LI+G C A   +EA R+  EM  +G++ + VT N I+  LC  RK+D+A +
Sbjct: 419 SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 478

Query: 299 LL-----------------------------------DLMVQRGVRPNACTYNTLMDGFC 323
           LL                                   D M ++ + P+  TYNT++ G C
Sbjct: 479 LLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLC 538

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             GK +++ +    +   G   D+ +YN +I GYC+  +VE+A   + +MV K  KP + 
Sbjct: 539 HSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLF 598

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T N L  GL     ++ ALKLF+     G A D  TY T I GLCK     EA +L   +
Sbjct: 599 TCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEM 658

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLV------------------ 484
              K   D   YN ++  L  +GR+K A E    +   G L                   
Sbjct: 659 EEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETS 718

Query: 485 ----PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
               PN VT++  I  LC  G+   A  +  +  +        T+  L+ G I+
Sbjct: 719 QESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 240/465 (51%), Gaps = 9/465 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGL---HAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F R+ R    PN  T N+LI  L    ++  +  + A+F+ +   G + N  T+N LI G
Sbjct: 162 FNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYG 221

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C       A+ L  +M +        C P+ V+Y+TI+D LCK+G +++A+ L L MK+
Sbjct: 222 CCIENKLSEAIGLIGKMKD------FSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN 275

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + P+  T+N L+ G C      EA ++   M    V P V T+N+++  LCK+ K+DE
Sbjct: 276 NGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDE 335

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A RL D M    + P+  TYNTL++G        +  EL   ME  G K + V+YN+++ 
Sbjct: 336 AFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVK 395

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            Y K  +++ A +  R+M   G  P  VT+NTL  G  +  ++  A ++ DEM R G+  
Sbjct: 396 WYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKM 455

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           ++ T  T +  LC    + +A +L  +       +D  +Y  LI G  K G+   A +L+
Sbjct: 456 NSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLW 515

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    ++P+++TYN MI GLC+ G+ D++ D   ++ E+   PD  T++ +I G+ R 
Sbjct: 516 DEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCRE 575

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            +  K  +  +KM +K   PD    +I++  L    +  K+L  F
Sbjct: 576 GQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLF 620



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 168/328 (51%), Gaps = 3/328 (0%)

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE---ASRL 299
           V  ++ I      N  + A ++F  M    ++P+++T N +++ L +         +  +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              +++ GV+ N  T+N L+ G C+  K++ A  L G M+   C  D+VSYN +++  CK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
             ++ EA  L  +M + G+ P   T+N L  G  ++  ++ A ++ D M ++ V  D  T
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   I GLCK+G I EA  L   +  LK   D+  YN LI+G          +EL   + 
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + PN VTYN++++    +G+MD A +    MEE+  +PD +TF+ LI+G+ +    S
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS 439

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +   ++ +M  K +  ++  ++ ++  L
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNTILHTL 467



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 157/397 (39%), Gaps = 105/397 (26%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N+++    K    D       ++  +G  P+  T+N LIN +CK GR+S  F  
Sbjct: 385 PNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRM 444

Query: 119 FGRILRSCFTPNAATFNS-----------------------------------LIKGLHA 143
              + R     N+ T N+                                   LI G   
Sbjct: 445 MDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 504

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           + + +EA  L+ ++K     P++ITYNT+I GLC +G T  +++   E+     E G+V 
Sbjct: 505 DGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL----ESGLV- 559

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV--------------------- 242
            P+  TY+TII G C+EG V+KA     +M  ++  PD+                     
Sbjct: 560 -PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618

Query: 243 --------------VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
                         VTYN++I GLC  + + EA  L  EM ++ + P   T+N I+  L 
Sbjct: 619 LFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678

Query: 289 KNRKMDEASRLLDLMVQRG-----------------------VRPNACTYNTLMDGFCLM 325
              +M EA   +  +V++G                         PN+ T++  ++  C  
Sbjct: 679 DAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQ 738

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           GK   A  +       G      +Y  L+ G  K ++
Sbjct: 739 GKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 38/254 (14%)

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ---VEHALKLFDEMQR 410
           I  Y        A  ++  M    +KP ++T NTL   L        V  +  +F ++ +
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            GV  +T T+   I G C    + EA+ L   ++   C  D  +YN ++D LCK G+L  
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265

Query: 471 AWELFCSLPHGVLVPN-----------------------------------VVTYNIMIQ 495
           A +L   + +  L+PN                                   V TYN++I 
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           GLC DG++D+A  L  +ME     PDV+T++ LI+G    +   K  EL+ KM+ K V P
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385

Query: 556 DASIVSIVVDLLVK 569
           +A   ++VV   VK
Sbjct: 386 NAVTYNVVVKWYVK 399


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 277/577 (48%), Gaps = 53/577 (9%)

Query: 34  DLTTREGDINVITPNEAFCIFDYML-RMHPS--PPPVSSFNILLASLAKNKHYDT----- 85
           D+ T    INV+    +F    Y++ +M  S   P + ++N +L    K   +       
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291

Query: 86  -RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
             + + G+  ++ TYN+LI+  C+  R++ G++    + +    PN  T+N+LI G   E
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVC 203
            +++ A+ L  ++ +FG  PN +T+N LI+G    G+   AL +F  M A G        
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-------L 404

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY  +I GLC     +EA  
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  EM   G+ P +VT++ +++  CK  +   A  ++  + + G+ PN   Y+TL+   C
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            MG +  A  ++ +M   G   D  ++N+L+   CK  +V EA    R M S GI P  V
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +++ L  G     +   A  +FDEM + G      TY + + GLCK G++ EA +  ++L
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
             +   +D   YN L+  +CKSG L  A  LF  +    ++P+  TY  +I GLC  G+ 
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704

Query: 504 ---------DKARD----------LFLD-----------------MEENAAAPDVITFDM 527
                     +AR            F+D                 M+     PD++T + 
Sbjct: 705 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +I G+ R+ +  K N+LL +M  +   P+ +  +I++
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 245/483 (50%), Gaps = 12/483 (2%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G+ S  F A     R C   N + ++ LI+    E  I ++  +F  +  +G  P+V T 
Sbjct: 143 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 201

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N ++  + ++G  +   +  +EM         +C P+  T++ +I+ LC EG  +K+  L
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 255

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+     P +VTYN+++H  C    +  A  L   M  +GV   V T+N+++ +LC+
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           + ++ +   LL  M +R + PN  TYNTL++GF   GK+  A +L   M S G   + V+
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +N LI+G+      +EAL ++  M +KG+ P+ V+Y  L  GL +  + + A   +  M+
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R+GV     TYT  IDGLCKNG++ EAV L   +     + DI  Y+ LI+G CK GR K
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A E+ C +    L PN + Y+ +I   C  G + +A  ++  M       D  TF++L+
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI-SLKSLPSFLVQERQGE 588
               +  + ++  E +  M    ++P+    ++  D L+     S + L +F V +   +
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPN----TVSFDCLINGYGNSGEGLKAFSVFDEMTK 611

Query: 589 VGE 591
           VG 
Sbjct: 612 VGH 614



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 252/528 (47%), Gaps = 39/528 (7%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN  TYN LIN F   G+V +       +L    +PN  TFN+LI G  +E    EA 
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG--------NGEIGVV 202
            +F  ++A G  P+ ++Y  L++GLC+     +A   +  M  NG         G I  +
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 453

Query: 203 CK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           CK                    P+ VTYS +I+G CK G    AK +  ++    ++P+ 
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           + Y++LI+  C      EA R++  M+ +G      TFNV++  LCK  K+ EA   +  
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 573

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G+ PN  +++ L++G+   G+  +A  +F  M  +G      +Y  L+ G CK   
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + EA    + + +       V YNTL   + +   +  A+ LF EM +  +  D+ TYT+
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQA-YNCLIDGLCKSGRLK---FAWELFCSL 478
            I GLC+ G  + A+   +        L  +  Y C +DG+ K+G+ K   +  E   +L
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            H    P++VT N MI G    G+++K  DL  +M      P++ T+++L+HG+ +  + 
Sbjct: 754 GH---TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810

Query: 539 SKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKN--EISLKSLPSFLVQ 583
           S    L   +    ++PD  +  S+V+ +   N  EI LK L +F+ +
Sbjct: 811 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 858



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 230/459 (50%), Gaps = 9/459 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++YT N ++    K G     +     +L+    P+ ATFN LI  L AE    ++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           + L  K++  G  P ++TYNT+++  C+ G    A+ L + M +  G    VC     TY
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVC-----TY 306

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I  LC+   + K   L   M+   I+P+ VTYN+LI+G  +      A +L  EM+ 
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VTFN ++D         EA ++  +M  +G+ P+  +Y  L+DG C   + + 
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   +  M+  G     ++Y  +I+G CKN  ++EA+ L  EM   GI P +VTY+ L  
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  ++ + + A ++   + R G++ +   Y+T I   C+ G + EA+ ++  + +     
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   +N L+  LCK+G++  A E    +    ++PN V+++ +I G  N G+  KA  +F
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606

Query: 511 LDMEENAAAPDVITFDMLIHGFIR---INEPSKVNELLH 546
            +M +    P   T+  L+ G  +   + E  K  + LH
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 228/493 (46%), Gaps = 9/493 (1%)

Query: 97   YTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFT 155
            +T+N+L+   CK G+V+     F R + S    PN  +F+ LI G       ++A ++F 
Sbjct: 549  FTFNVLVTSLCKAGKVAEAE-EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607

Query: 156  KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
            ++   G  P   TY +L+ GLC+ GH   A    + +        V    +TV Y+T++ 
Sbjct: 608  EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH------AVPAAVDTVMYNTLLT 661

Query: 216  GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQ 274
             +CK G + KA +LF +M   +I PD  TY SLI GLC       A     E   +G V 
Sbjct: 662  AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721

Query: 275  PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            P+ V +   +D + K  +        + M   G  P+  T N ++DG+  MGKI +  +L
Sbjct: 722  PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781

Query: 335  FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
               M +     +  +YNIL++GY K K+V  +  LYR ++  GI P  +T ++L LG+ E
Sbjct: 782  LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841

Query: 395  IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             + +E  LK+       GV  D  T+   I   C NG I  A +L + +  L   LD   
Sbjct: 842  SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901

Query: 455  YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
             + ++  L ++ R + +  +   +    + P    Y  +I GLC  G +  A  +  +M 
Sbjct: 902  CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 961

Query: 515  ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
             +   P  +    ++    +  +  +   LL  M + K++P  +  + ++ L  KN   +
Sbjct: 962  AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 1021

Query: 575  KSLPSFLVQERQG 587
            ++L   +V    G
Sbjct: 1022 EALELRVVMSNCG 1034



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 234/492 (47%), Gaps = 14/492 (2%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
            +AF +FD M ++    P   ++  LL  L K  H      +   L+A     +   YN L
Sbjct: 601  KAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG- 161
            +   CK G ++     FG +++    P++ T+ SLI GL  + + + A     + +A G 
Sbjct: 660  LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              PN + Y   ++G+ + G     +   E+M N      +   P+ VT + +IDG  + G
Sbjct: 720  VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMG 773

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++K   L  +M ++N  P++ TYN L+HG     D + +  L+  ++  G+ P  +T +
Sbjct: 774  KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833

Query: 282  VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             ++  +C++  ++   ++L   + RGV  +  T+N L+   C  G+IN A +L   M S+
Sbjct: 834  SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893

Query: 342  GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
            G   D  + + +++   +N   +E+  +  EM  +GI P    Y  L  GL  +  ++ A
Sbjct: 894  GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953

Query: 402  LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
              + +EM    +       +  +  L K G   EA  L R +  +K    I ++  L+  
Sbjct: 954  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 1013

Query: 462  LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             CK+G +  A EL   + +  L  ++V+YN++I GLC  G M  A +L+ +M+ +    +
Sbjct: 1014 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073

Query: 522  VITFDMLIHGFI 533
              T+  LI G +
Sbjct: 1074 ATTYKALIRGLL 1085



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 47   PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYN 100
             +EA  +  +ML+M    P ++SF  L+    KN +    L      +  GL  +L +YN
Sbjct: 985  ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043

Query: 101  ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            +LI   C  G ++L F  +  +    F  NA T+ +LI+GL A       A +  K
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 250/502 (49%), Gaps = 21/502 (4%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP    ++++L +  ++  +         ++A G   +    N+++N  C+ G V   
Sbjct: 144 PIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++       +  ++N+++KGL    R  +   L  ++    C PN++T+NTLI  
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260

Query: 176 LCRTGHTMIALNLFE---EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           LCR G       LFE   E+     E G  C P+   Y+TIIDG+CKEG ++ A  +  +
Sbjct: 261 LCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    + P+VV YN+++ GLC A  W EA+ L  EM  +      VTFN+++D  C+N  
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D    LL+ M+  G  P+  TY T+++GFC  G I+ A  L  SM S GCK + VSY I
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++ G C      +A  L  +M+ +G  P  VT+NTL   L +   VE A++L  +M  +G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
            + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   L + GR+    
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F ++    +  + V YN +I  LC   + D+A D F  M  N   P+  T+ MLI G 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 533 IRINEPSKVNELLHKMKEKKVM 554
                  +  ELL ++  +  +
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 251/522 (48%), Gaps = 20/522 (3%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP   +F  ++  L         L         G  P    Y++++   C+ G    G
Sbjct: 106 PVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSG----G 161

Query: 116 FIAFGRILRSCF----TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           F    R+L +      T +    N ++  +  +  + EA  L  KL  FGCE ++++YN 
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNA 221

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++ GLC          L +EM      + V C PN VT++T+I  LC+ G  ++   +  
Sbjct: 222 VLKGLCMAKRWGDVEELMDEM------VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA 275

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM +    PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC   
Sbjct: 276 QMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAE 335

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           +  EA  LL  M Q+    +  T+N L+D FC  G ++R  EL   M S GC  D ++Y 
Sbjct: 336 RWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYT 395

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+CK   ++EA+ L + M S G KP  V+Y  +  GL    +   A +L  +M + 
Sbjct: 396 TVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ 455

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+ + A
Sbjct: 456 GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            EL   + +  + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I  
Sbjct: 516 LELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISS 575

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
             +  E  +  +    M     MP+ S  ++++  L    ++
Sbjct: 576 LCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 241/508 (47%), Gaps = 46/508 (9%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            YN ++  +C+ G+++        +      PNA TF  +++GL    RI +A  +  ++
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDG 216
              GC P    Y+ ++   CR+G    ++ + E M A G       C  +T   + +++ 
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNA 190

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           +C++G VD+A  L  ++       D+V+YN+++ GLC A  W + + L  EM+     P+
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250

Query: 277 VVTFNV-----------------------------------IMDELCKNRKMDEASRLLD 301
           +VTFN                                    I+D +CK   ++ A+ +L+
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G++PN   YNT++ G C   +   AEEL   M    C  DDV++NIL++ +C+N 
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V+  + L  +M+S G  P V+TY T+  G  +   ++ A+ L   M   G   +T +YT
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GLC  G  ++A EL   +    C  +   +N LI+ LCK G ++ A EL   +   
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++++Y+ +I GL   G+ ++A +L   M     +P+ I +  +     R    +KV
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++   +K+  +  DA + + V+  L K
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCK 578



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 3/258 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            YN ++ G+C  G++  A        ++    +  ++  ++ G C    + +AL +  EM
Sbjct: 81  AYNAMVAGYCRAGQLAAARR---LAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KG  P    Y+ +           +++++ + M   G   DT      ++ +C+ G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EAV L R L    CE DI +YN ++ GLC + R     EL   +      PN+VT+N +
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  LC +G  ++  ++   M E+   PD+  +  +I G  +       NE+L++M    +
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 554 MPDASIVSIVVDLLVKNE 571
            P+    + V+  L   E
Sbjct: 318 KPNVVCYNTVLKGLCSAE 335


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 256/508 (50%), Gaps = 13/508 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P + T+N +++  CK G V         +      PN  ++N L+ GL  +     A  L
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKEL 264

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-IGVVCKPNTVTYST 212
             ++   G + +  TYN LI G C+         +FEE  +   E +G    P  VTY+T
Sbjct: 265 IEQMSMLGLKVSAHTYNPLIRGFCKK-------EMFEEANDLRREMLGRGALPTVVTYNT 317

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+  LC+ G V  A+     M +E++ PD+V+YN+LI+G     ++ EA  LF E+  + 
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + PSVVT+N ++D  C+   +D A  + D M++ G+ P+  T+  L+ GFC MG +  A+
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           ELF  M S G K D ++Y   I G  K     +A  +  EM ++G  P ++TYN L  GL
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            ++   + A +L  +M+ +G+  D  TYT+ I     +G + +A E+F  +        +
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  LI      GRL FA + F  +    + PNV+TYN +I GLC +  MD A +LF +
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE- 571
           ME    +P+  T+ +LI+    +       +L   M ++++ PD+   S ++  L K+  
Sbjct: 618 MESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677

Query: 572 ----ISLKSLPSFLVQERQGEVGESNVK 595
               + L++LP  +V+     + E  VK
Sbjct: 678 LLAVLRLENLPLAIVEINSTWIAEGFVK 705



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 246/501 (49%), Gaps = 41/501 (8%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++LI  F K   +    + F +++ +   P+    N ++K L  +S + E   +++ +  
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
               P ++T+NT+++  C+ G    A+ + + M          C PN V+Y+ +++GL  
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFG------CDPNDVSYNVLVNGLSG 254

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G  D+AK L  QM    +     TYN LI G C    + EA  L  EM+ +G  P+VVT
Sbjct: 255 KGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVT 314

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N IM  LC+  ++ +A R LD+MV   + P+  +YNTL+ G+  +G    A  LF  + 
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374

Query: 340 SM---------------GC----------------KH----DDVSYNILINGYCKNKEVE 364
           S                GC                KH    D V++ IL+ G+C+   + 
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A  L+ EM+S+G+KP  + Y T  +G  ++     A  + +EM+ +G   D  TY   I
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GLCK G   +A EL + +R+     D   Y  +I     SG L+ A E+F  +    + 
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+VVTY ++I      G++D A+  F +M++   +P+VIT++ LI+G  + N       L
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNL 614

Query: 545 LHKMKEKKVMPDASIVSIVVD 565
             +M+ K V P+    +I+++
Sbjct: 615 FAEMESKGVSPNKYTYTILIN 635



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 197/375 (52%), Gaps = 4/375 (1%)

Query: 199 IGVVCKPNTVTYSTIIDGL----CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
           +G+ C  N+     ++D L     K+  ++K   +F +M +  + PDV   N ++  L  
Sbjct: 125 VGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKD 184

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
            +  NE + ++  M+   ++P++VTFN +MD  CK  ++  A  +LD+M   G  PN  +
Sbjct: 185 KSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVS 244

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN L++G    G+ +RA+EL   M  +G K    +YN LI G+CK +  EEA  L REM+
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            +G  PTVVTYNT+   L  + +V  A +  D M  + +  D  +Y T I G  + G   
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EA+ LF  LR       +  YN LIDG C++G L  A  +   +    L P+VVT+ I++
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +G C  G +  A++LF +M      PD I +   I G +++  PSK   +  +MK +   
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484

Query: 555 PDASIVSIVVDLLVK 569
           PD    +++++ L K
Sbjct: 485 PDLITYNVLINGLCK 499



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 201/378 (53%), Gaps = 6/378 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P + TYN ++   C++GRVS        ++     P+  ++N+LI G        EA
Sbjct: 307 GALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEA 366

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF++L++    P+V+TYNTLI+G CRTG+  IA  + ++M         +C P+ VT+
Sbjct: 367 LLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG-----LC-PDVVTF 420

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++ G C+ G +  AK LF +M    + PD + Y + I G     + ++A  +  EM  
Sbjct: 421 TILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKA 480

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P ++T+NV+++ LCK    D+A+ L+  M   G+ P+  TY +++    + G + +
Sbjct: 481 EGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRK 540

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AEE+F  M   G     V+Y +LI+ Y     ++ A   + EM  KG+ P V+TYN L  
Sbjct: 541 AEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIY 600

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL + + ++ A  LF EM+  GV+ +  TYT  I+      Y  +A++L++ +   + + 
Sbjct: 601 GLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKP 660

Query: 451 DIQAYNCLIDGLCKSGRL 468
           D   ++ L+  L K  +L
Sbjct: 661 DSCTHSALMKHLSKDYKL 678



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 194/382 (50%), Gaps = 14/382 (3%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V ++N ++ SL +        ++ D  +N   L P+L +YN LI  + ++G  +   +
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED-LMPDLVSYNTLIYGYSRLGNFAEALL 368

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  +      P+  T+N+LI G      +  A  +   +   G  P+V+T+  L+ G C
Sbjct: 369 LFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFC 428

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G+  +A  LF+EM +         KP+ + Y+T I G  K G   KA  +  +MK E 
Sbjct: 429 QMGNLPMAKELFDEMLSRG------LKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG 482

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD++TYN LI+GLC   ++++A  L  +M  +G+ P  VT+  I+     +  + +A 
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +   M+++G+ P+  TY  L+  + + G+++ A++ F  M+  G   + ++YN LI G 
Sbjct: 543 EVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGL 602

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   ++ A +L+ EM SKG+ P   TY  L      +   + ALKL+ +M    +  D+
Sbjct: 603 CKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDS 662

Query: 418 RTYTTFIDGLCKNGYIIEAVEL 439
            T++  +  L K+  ++  + L
Sbjct: 663 CTHSALMKHLSKDYKLLAVLRL 684



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 169/362 (46%), Gaps = 48/362 (13%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNIL 102
           EA  +F   LR     P V ++N L+    +  + D        +   GL P++ T+ IL
Sbjct: 365 EALLLFSE-LRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTIL 423

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +  FC++G + +    F  +L     P+   + + I G        +A  +  ++KA G 
Sbjct: 424 VRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGF 483

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P++ITYN LINGLC+ G+   A  L ++M       G+V  P+ VTY++II      G 
Sbjct: 484 PPDLITYNVLINGLCKLGNFDDANELVQKMRLE----GIV--PDHVTYTSIIHAHLISGL 537

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           + KA+ +F  M  + I+P VVTY  LIH        + AK+ F EM D+GV P+V+T+N 
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LCK   MD A  L   M  +GV PN  T                            
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYT---------------------------- 629

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
                  Y ILIN     +  ++AL LY++M+ + IKP   T++ L   L + +++   L
Sbjct: 630 -------YTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVL 682

Query: 403 KL 404
           +L
Sbjct: 683 RL 684


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 277/577 (48%), Gaps = 53/577 (9%)

Query: 34  DLTTREGDINVITPNEAFCIFDYML-RMHPS--PPPVSSFNILLASLAKNKHYDT----- 85
           D+ T    INV+    +F    Y++ +M  S   P + ++N +L    K   +       
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251

Query: 86  -RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
             + + G+  ++ TYN+LI+  C+  R++ G++    + +    PN  T+N+LI G   E
Sbjct: 252 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 311

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVC 203
            +++ A+ L  ++ +FG  PN +T+N LI+G    G+   AL +F  M A G        
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-------L 364

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY  +I GLC     +EA  
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  EM   G+ P +VT++ +++  CK  +   A  ++  + + G+ PN   Y+TL+   C
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            MG +  A  ++ +M   G   D  ++N+L+   CK  +V EA    R M S GI P  V
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +++ L  G     +   A  +FDEM + G      TY + + GLCK G++ EA +  ++L
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
             +   +D   YN L+  +CKSG L  A  LF  +    ++P+  TY  +I GLC  G+ 
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 664

Query: 504 ---------DKARD----------LFLD-----------------MEENAAAPDVITFDM 527
                     +AR            F+D                 M+     PD++T + 
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +I G+ R+ +  K N+LL +M  +   P+ +  +I++
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 245/483 (50%), Gaps = 12/483 (2%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G+ S  F A     R C   N + ++ LI+    E  I ++  +F  +  +G  P+V T 
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N ++  + ++G  +   +  +EM         +C P+  T++ +I+ LC EG  +K+  L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+     P +VTYN+++H  C    +  A  L   M  +GV   V T+N+++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           + ++ +   LL  M +R + PN  TYNTL++GF   GK+  A +L   M S G   + V+
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +N LI+G+      +EAL ++  M +KG+ P+ V+Y  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R+GV     TYT  IDGLCKNG++ EAV L   +     + DI  Y+ LI+G CK GR K
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A E+ C +    L PN + Y+ +I   C  G + +A  ++  M       D  TF++L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI-SLKSLPSFLVQERQGE 588
               +  + ++  E +  M    ++P+    ++  D L+     S + L +F V +   +
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPN----TVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 589 VGE 591
           VG 
Sbjct: 572 VGH 574



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 252/528 (47%), Gaps = 39/528 (7%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN  TYN LIN F   G+V +       +L    +PN  TFN+LI G  +E    EA 
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG--------NGEIGVV 202
            +F  ++A G  P+ ++Y  L++GLC+     +A   +  M  NG         G I  +
Sbjct: 354 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413

Query: 203 CK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           CK                    P+ VTYS +I+G CK G    AK +  ++    ++P+ 
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           + Y++LI+  C      EA R++  M+ +G      TFNV++  LCK  K+ EA   +  
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 533

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G+ PN  +++ L++G+   G+  +A  +F  M  +G      +Y  L+ G CK   
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + EA    + + +       V YNTL   + +   +  A+ LF EM +  +  D+ TYT+
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQA-YNCLIDGLCKSGRLK---FAWELFCSL 478
            I GLC+ G  + A+   +        L  +  Y C +DG+ K+G+ K   +  E   +L
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            H    P++VT N MI G    G+++K  DL  +M      P++ T+++L+HG+ +  + 
Sbjct: 714 GH---TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770

Query: 539 SKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKN--EISLKSLPSFLVQ 583
           S    L   +    ++PD  +  S+V+ +   N  EI LK L +F+ +
Sbjct: 771 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 230/459 (50%), Gaps = 9/459 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++YT N ++    K G     +     +L+    P+ ATFN LI  L AE    ++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           + L  K++  G  P ++TYNT+++  C+ G    A+ L + M +  G    VC     TY
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVC-----TY 266

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I  LC+   + K   L   M+   I+P+ VTYN+LI+G  +      A +L  EM+ 
Sbjct: 267 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VTFN ++D         EA ++  +M  +G+ P+  +Y  L+DG C   + + 
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   +  M+  G     ++Y  +I+G CKN  ++EA+ L  EM   GI P +VTY+ L  
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  ++ + + A ++   + R G++ +   Y+T I   C+ G + EA+ ++  + +     
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   +N L+  LCK+G++  A E    +    ++PN V+++ +I G  N G+  KA  +F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 511 LDMEENAAAPDVITFDMLIHGFIR---INEPSKVNELLH 546
            +M +    P   T+  L+ G  +   + E  K  + LH
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 228/493 (46%), Gaps = 9/493 (1%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           +T+N+L+   CK G+V+     F R + S    PN  +F+ LI G       ++A ++F 
Sbjct: 509 FTFNVLVTSLCKAGKVAEAE-EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++   G  P   TY +L+ GLC+ GH   A    + +        V    +TV Y+T++ 
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH------AVPAAVDTVMYNTLLT 621

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQ 274
            +CK G + KA +LF +M   +I PD  TY SLI GLC       A     E   +G V 
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+ V +   +D + K  +        + M   G  P+  T N ++DG+  MGKI +  +L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M +     +  +YNIL++GY K K+V  +  LYR ++  GI P  +T ++L LG+ E
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            + +E  LK+       GV  D  T+   I   C NG I  A +L + +  L   LD   
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
            + ++  L ++ R + +  +   +    + P    Y  +I GLC  G +  A  +  +M 
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
            +   P  +    ++    +  +  +   LL  M + K++P  +  + ++ L  KN   +
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 981

Query: 575 KSLPSFLVQERQG 587
           ++L   +V    G
Sbjct: 982 EALELRVVMSNCG 994



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 234/492 (47%), Gaps = 14/492 (2%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
            +AF +FD M ++    P   ++  LL  L K  H      +   L+A     +   YN L
Sbjct: 561  KAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG- 161
            +   CK G ++     FG +++    P++ T+ SLI GL  + + + A     + +A G 
Sbjct: 620  LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              PN + Y   ++G+ + G     +   E+M N      +   P+ VT + +IDG  + G
Sbjct: 680  VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMG 733

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++K   L  +M ++N  P++ TYN L+HG     D + +  L+  ++  G+ P  +T +
Sbjct: 734  KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 282  VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             ++  +C++  ++   ++L   + RGV  +  T+N L+   C  G+IN A +L   M S+
Sbjct: 794  SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 342  GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
            G   D  + + +++   +N   +E+  +  EM  +GI P    Y  L  GL  +  ++ A
Sbjct: 854  GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 402  LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
              + +EM    +       +  +  L K G   EA  L R +  +K    I ++  L+  
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973

Query: 462  LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             CK+G +  A EL   + +  L  ++V+YN++I GLC  G M  A +L+ +M+ +    +
Sbjct: 974  CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033

Query: 522  VITFDMLIHGFI 533
              T+  LI G +
Sbjct: 1034 ATTYKALIRGLL 1045



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 47   PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYN 100
             +EA  +  +ML+M    P ++SF  L+    KN +    L      +  GL  +L +YN
Sbjct: 945  ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003

Query: 101  ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            +LI   C  G ++L F  +  +    F  NA T+ +LI+GL A       A +  K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 226/439 (51%), Gaps = 6/439 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           ++N L++ L    R       +  + A GC PN  TY  L+  LC+      A ++F  M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           A         C PN  +YS +I GLC+   VD+A  L  +M D    P+VVTY SL+ GL
Sbjct: 79  AAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  LF  M+ +G  P  V +NV++D   K   M EA RL + M+++G  P  
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN+L+ GF   G+  R + LF  M   GC  +  ++N L++G+CK  ++ EA  L+ E
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M S G  P VV+YNTL  G+    +   A +L  EM R GV  D  +Y   IDG  K+G 
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A++LF  +     E D  +Y+ +ID LC++G++  A+ +F  +      P+      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           ++ GLC   ++ ++ +LF  M +    P +  +++L++   +      V E+ H++ E+ 
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 553 VMPDASIVSIVVDLLVKNE 571
             PD  I  ++++ L +++
Sbjct: 433 FSPDVEISKVILETLRRSD 451



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 224/444 (50%), Gaps = 12/444 (2%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           S+N LL  LAK+   D        + A G  PN YTY  L+   C+  R       F  +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                +PN  +++ LI GL    ++ EAA L  ++   G +PNV+TY +L++GLC+ G  
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A++LF  M          C P+ V Y+ +IDG  K+G + +A  LF +M ++   P V
Sbjct: 139 KEAVDLFSRMVYRG------CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TYNSL+ G     ++   + LF +M+ QG  P++ TFN ++D  CK   M EA RL   
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G  P+  +YNTL+ G C  GK + A+ L   M   G   D VSYNILI+GY K+  
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           ++ A+ L+ E+   G++P   +Y+T+   L    +V  A  +F +M  +G A D      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + GLC+   + E+ ELF+ +   +C   I  YN L+  LCK+ R     E+F  L    
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKA 506
             P+V    ++++ L      D A
Sbjct: 433 FSPDVEISKVILETLRRSDDKDAA 456



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 193/366 (52%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
            T++Y+ +++ L K G  D     +  M      P+  TY  L+  LC A  + EA+ +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M  QG  P+V ++++++  LC+ +K+DEA+ LL+ M+  G +PN  TY +L+ G C M
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK+  A +LF  M   GC  D V YN+LI+G+ K  ++ EA  L+ EM+ KG  PTV TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N+L  G     +      LF +M R G   +  T+   +DG CK G ++EA  LF  +R 
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           L C  D+ +YN LI G+C  G+   A  L   +    + P++V+YNI+I G    G +D 
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  LF ++ ++   PD  ++  +I    R  +      +   M      PDA++V  +V 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 566 LLVKNE 571
            L + E
Sbjct: 376 GLCRGE 381



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 172/342 (50%), Gaps = 2/342 (0%)

Query: 230 FLQMKDENI--NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           F Q     +  N   ++YN L+  L  +   +     + +M+  G  P+  T+  ++  L
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSL 62

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C+ ++ +EA  +   M  +G  PN  +Y+ L+ G C   K++ A EL   M   G + + 
Sbjct: 63  CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y  L++G CK  +++EA+ L+  MV +G  P  V YN L  G  +   +  A +LF+E
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G      TY + + G  + G       LF+ +    C  +I  +N L+DG CK G 
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A  LF  +      P+VV+YN +I+G+C+ G+  +A+ L  +M  +   PD++++++
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           LI G+ +        +L +++ +  + PDA   S ++D L +
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCR 344



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 124/279 (44%), Gaps = 27/279 (9%)

Query: 4   ESCCNRSFSFASAPISAF--RSNFSSLLVHFRDLTTREGDINVITPN---EAFCIFDYML 58
           + C    F++ S  +S F  +  F  +   F+D+  +    N+ T N   + FC    M+
Sbjct: 186 KGCIPTVFTYNSL-LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 59  RMH---------PSPPPVSSFNILLASL-AKNKHYDTR-----LNATGLFPNLYTYNILI 103
             H           PP V S+N L+  + +K K ++ +     +  +G+ P++ +YNILI
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + + K G +      F  I +S   P+A +++++I  L    ++  A  +F  + A G  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+      L+ GLCR      +  LF+ M      +   C P    Y+ ++  LCK    
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAM------VKFECVPLIPEYNLLMYKLCKAKRS 418

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           D    +F ++ +   +PDV     ++  L  ++D + A+
Sbjct: 419 DDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 259/514 (50%), Gaps = 17/514 (3%)

Query: 49  EAFCIFDYM-LRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNI 101
           +A  + D M LR   + PP+   +++L +  +   + +       L+A G   +    N+
Sbjct: 126 DALTVLDEMPLRGCAATPPMC--HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNL 183

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++  C+ G V  G     ++      P+  ++N+++KGL    R  +   L  ++   G
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV-VCKPNTVTYSTIIDGLCKE 220
           C PNV T+NTLI  LCR G       LFE++     ++    C P+   Y+TIIDG+CK+
Sbjct: 244 CPPNVATFNTLIAYLCRNG-------LFEQVHEALSQMPEHGCTPDLRMYATIIDGICKD 296

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G  + A  +  +M    + P+VV YN+++ GLC A  W EA+ L  EM  +      VTF
Sbjct: 297 GHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTF 356

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N+++D  C+N  +D    LL+ M++ G  P+  TY T+++GFC  G ++ A  L  +M +
Sbjct: 357 NILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 416

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GCK + +SY I++ G C+ +   +A  L   M+ +G  P  VT+NTL   + +   VE 
Sbjct: 417 CGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQ 476

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A++L  +M  +G + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +  
Sbjct: 477 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 536

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            L + GR     ++F S+    +  +   YN +I  LC   + D+A D F  M  N   P
Sbjct: 537 ALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 596

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           +  T+ +LI G        +  +LL ++  ++ +
Sbjct: 597 NESTYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 234/506 (46%), Gaps = 41/506 (8%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCF-TP-----------NAATFNSLIKG 140
           PN YTY  ++   C  G ++        + LR C  TP               F S ++ 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 141 L---HAESRIM-------------------EAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           L   HA+   +                   E   L  KL +FGCEP++++YN ++ GLC 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                    L  EM      + V C PN  T++T+I  LC+ G  ++      QM +   
Sbjct: 226 AKRWDDVEELMVEM------VRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGC 279

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC   + +EA  
Sbjct: 280 TPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAED 339

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M Q     +  T+N L+D FC  G ++R  EL   M   GC  D ++Y  +ING+C
Sbjct: 340 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC 399

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   V+EA+ L + M + G KP  ++Y  +  GL    +   A +L   M + G   +  
Sbjct: 400 KEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV 459

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+ T I+ +CK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+ + A EL   +
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            +  + PN + Y+ M   L  +G+ DK   +F  +++     D   ++ +I    +  E 
Sbjct: 520 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 579

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVV 564
            +  +    M     MP+ S  +I++
Sbjct: 580 DRAIDFFAYMVSNGCMPNESTYTILI 605



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 238/497 (47%), Gaps = 11/497 (2%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           L +  +       L+  G    +  YN +I  +C+ G+V+        +      PNA T
Sbjct: 54  LCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYT 110

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM- 192
           +  +++ L A   I +A  +  ++   GC       + ++   CR G    A+   + + 
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           A G       C  ++   + ++  +C++G VD+   L  ++      PD+V+YN+++ GL
Sbjct: 171 AKG-------CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C A  W++ + L +EM+  G  P+V TFN ++  LC+N   ++    L  M + G  P+ 
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             Y T++DG C  G    A ++   M S G K + V YN ++ G C  +  EEA  L  E
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +      VT+N L     +   V+  ++L ++M   G   D  TYTT I+G CK G 
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + EAV L + +    C+ +  +Y  ++ GLC++ R   A EL   +     +PN VT+N 
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I  +C  G +++A +L   M  N  +PD+I++  +I G  +  +  +  ELL+ M  K 
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523

Query: 553 VMPDASIVSIVVDLLVK 569
           + P+  I S +   L +
Sbjct: 524 ITPNTIIYSSMASALSR 540



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 169/360 (46%), Gaps = 8/360 (2%)

Query: 211 STIIDGLCKEG-FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           S +I  LC  G   D A+AL            VV YN++I G C A    +         
Sbjct: 48  SALIRSLCAAGRTADAARAL----DTAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAA 100

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
              V P+  T+  I+  LC    + +A  +LD M  RG        + +++  C  G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A      + + GC  D  + N++++  C+   V+E + L R++ S G +P +V+YN + 
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    + +   +L  EM R G   +  T+ T I  LC+NG   +  E    +    C 
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D++ Y  +IDG+CK G  + A ++   +P   L PNVV YN +++GLC+  + ++A DL
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +M +     D +TF++L+  F +     +V ELL +M E   +PD    + V++   K
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 400


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 254/513 (49%), Gaps = 15/513 (2%)

Query: 49  EAFCIFDYMLRMHPSP-PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNI 101
           +A  + D M R   +P PP+  ++++L +  +   + +       L+A G   ++   N+
Sbjct: 140 DALAVLDEMPRRGCAPIPPM--YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNL 197

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  C  G V         +      P+  ++N+++KGL    R      L  ++    
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN++T+NTLI+ LCR G       +  +MA         C P+   Y+TIIDG+CKEG
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHG------CTPDIRMYATIIDGICKEG 311

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +  A  +  +M    + P+VV YN+L+ GLC A  W E + L  EM D+      VTFN
Sbjct: 312 HLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++D  C+N  +D    LL+ M+  G  P+  TY T+++GFC  G I+ A  L  SM + 
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GCK + +SY I++ G C  +   +A  L  +M+ +G     +T+NTL   L +   VE A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++L  +M  +G + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L + GR+    ++F ++    +  + V YN +I  LC  G+ ++A +    M  +   P+
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             T+ +LI G        +  E+L ++  K  +
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 251/514 (48%), Gaps = 22/514 (4%)

Query: 62  PSPP-PVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P PP   + F ++ A  A+ +  D       +   G  P    Y++++   C+ G    G
Sbjct: 117 PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGG----G 172

Query: 116 FIAFGRIL-----RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           F +  R+L     R C   +    N ++  +  +  + +A  L   L +FGCEP+V++YN
Sbjct: 173 FRSAVRVLEDLHARGCAL-DVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYN 231

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            ++ GLC          L EEM      + + C PN VT++T+I  LC+ G  ++   + 
Sbjct: 232 AVLKGLCMAKRWGCVQELMEEM------VRMACPPNIVTFNTLISYLCRNGLFERVHEVL 285

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            QM +    PD+  Y ++I G+C       A  +   M   G++P+VV +N ++  LC  
Sbjct: 286 AQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSA 345

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            + +E   LL  M  +    +  T+N L+D FC  G ++R  EL   M   GC  D ++Y
Sbjct: 346 ERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITY 405

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             +ING+CK   ++EA+ L + M + G KP  ++Y  +  GL    +   A  L  +M +
Sbjct: 406 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+   
Sbjct: 466 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A EL   + +  + PN + Y+ +   L  +G+++K   +F ++++     D + ++ +I 
Sbjct: 526 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 585

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              +  E  +  E L  M     +P+ S  +I++
Sbjct: 586 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILI 619



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 236/509 (46%), Gaps = 50/509 (9%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFT--PNAATFNSLIKGLHAESRIMEAAALFTK 156
           YN ++  +C+ G++        R L +     PNA T+  +++ L A  RI +A A+  +
Sbjct: 93  YNAMVAGYCRAGQLE-----SARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDE 147

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIID 215
           +   GC P    Y+ ++   CR G    A+ + E++ A G       C  +    + +++
Sbjct: 148 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-------CALDVGNCNLVLN 200

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            +C +G VDKA  L   +      PDVV+YN+++ GLC A  W   + L  EM+     P
Sbjct: 201 AICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 260

Query: 276 SVVTFNV-----------------------------------IMDELCKNRKMDEASRLL 300
           ++VTFN                                    I+D +CK   +  A  +L
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M   G++PN   YNTL+ G C   +    EEL   M    C  DDV++NIL++ +C+N
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             V+  + L  +M+  G  P V+TY T+  G  +   ++ A+ L   M   G   +T +Y
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  + GLC     ++A +L   +    C L+   +N LI+ LCK G ++ A EL   +  
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
               P++++Y+ +I GL   G+ D+A +L   M     +P+ I +  +     R    +K
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           V ++   +++  +  DA + + V+  L K
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCK 589



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 180/383 (46%), Gaps = 17/383 (4%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ ++ G C+ G ++ A+ L   +    + P+  TY  ++  LC      +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P    ++VI++  C+      A R+L+ +  RG   +    N +++  C  G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A  L   + S GC+ D VSYN ++ G C  K       L  EMV     P +VT+NTL 
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 390 L-----GLFE-IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
                 GLFE +H+V        +M   G   D R Y T IDG+CK G++  A E+   +
Sbjct: 270 SYLCRNGLFERVHEV------LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                + ++  YN L+ GLC + R +   EL   +       + VT+NI++   C +G +
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+  +L   M  +   PDVIT+  +I+GF +     +   LL  M      P+    +IV
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 564 VDLLVKNE--ISLKSLPSFLVQE 584
           +  L   E  +  + L S ++Q+
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQ 466


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 269/548 (49%), Gaps = 56/548 (10%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILIN--- 104
           FD M+R  PSP  V+ F+ L+    K    D   +        G+ P+L  Y+ILIN   
Sbjct: 263 FDMMVRSGPSPNLVT-FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 105 --------------------------------CFCKIGRVSLGFIAFGRILRSCFTPNAA 132
                                            + ++G +      + R+L+   +PN  
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T++ LI GL    R++EA  +F ++   G EP+V+TY++LI+G C++          E +
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS----------ENL 431

Query: 193 ANGNGEIGVVCK----PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            +G G  G++ +    P+ V  S +I+GL ++G +D+A   F Q     +  +   +N+L
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I G        +  +++I M    V P VVT+ V++  L +  ++DEA  L   ++++G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+   Y TL+DGFC         ++F  M+S G   D   YN+LIN + +   VE  L 
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L RE++  G++P +VTYNT+  G   +     A+KLF+ ++      +  T+T  ID  C
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+G + +A+ +F ++     E +I  Y+CLIDG  K+   + A+EL+  +    + PN+V
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV 731

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +Y+I+I GLC  G M++A   F         PDVI + +LI G+ ++   ++   L   M
Sbjct: 732 SYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHM 791

Query: 549 KEKKVMPD 556
               +MPD
Sbjct: 792 LVNGIMPD 799



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 240/480 (50%), Gaps = 6/480 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  PNL T++ LIN +CK  R+   F  +  ++     P+   ++ LI GL    ++ E
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
             +LF+   A G + +V+ ++++++   R G    A+ ++  M            PN VT
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG------ISPNVVT 382

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I+GLC+ G V +A  +F Q+  + + P V+TY+SLI G C + +  +   L+  M+
Sbjct: 383 YSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIML 442

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P VV  +++++ L +   MDEA R     V+RG+  N   +N L+DG   + +  
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
              +++  M       D V+Y +L+ G  +   ++EAL+L+ +++ KG  P  + Y TL 
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +       L++F  MQ +G+  D   Y   I+   + G +   +EL R +     E
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DI  YN +I G C       A +LF  L  G   PN +T+ I+I   C DG+MD A  +
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  M E    P+++T+  LI G+ +        EL  KM   +V P+    SI++D L K
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 208/424 (49%), Gaps = 10/424 (2%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            FNS +K    E  +    AL  +    G  P ++  N ++ GLC      +A + F+ M
Sbjct: 211 VFNSFLKRGEVEKGLNFHRALVER----GLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN VT+ST+I+  CKE  +D+A +L+  M ++ I PD+V Y+ LI+GL
Sbjct: 267 VRSGPS------PNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGL 320

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A    E   LF   + +GV+  VV F+ IMD   +   + +A  +   M++ G+ PN 
Sbjct: 321 FRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNV 380

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY+ L++G C  G++  A  +FG +   G +   ++Y+ LI+G+CK++ + +   LY  
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGI 440

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+ KG  P VV  + L  GL     ++ AL+ F +  + G+  +   +   IDG  +   
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKR 500

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             + ++++  + + K   D+  Y  L+ GL + GRL  A  LF  L      P+ + Y  
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G C          +F  M+ N   PD+  +++LI+ F R      V ELL ++ +  
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620

Query: 553 VMPD 556
           + PD
Sbjct: 621 LEPD 624



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/565 (23%), Positives = 247/565 (43%), Gaps = 73/565 (12%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD--TRL--NATGLFPNLYTYNIL 102
           P  A   F++         PV SF  +   L +++ +D  TR+     G F NL      
Sbjct: 69  PTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEV---- 124

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR---IMEAAALFTKLKA 159
                 +G     F  +G         N +T  S +  LH   R   +  A   F  +  
Sbjct: 125 ------LGEFHGSFRNYG--------SNPSTVYSFL--LHCYCRNGMVDRAVDTFAWMSK 168

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G   +    + +++ L  +    + L  +EEM  G G            Y  + +   K
Sbjct: 169 MGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLG-----------VYEFVFNSFLK 217

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G V+K       + +  + P +V  N ++ GLC  N    A   F  M+  G  P++VT
Sbjct: 218 RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVT 277

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F+ +++  CK  ++DEA  L +LM+++G+ P+   Y+ L++G    GK+     LF    
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           + G K D V ++ +++ Y +  ++ +A+ +Y  M+ +GI P VVTY+ L  GL    +V 
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKN----------------------------- 430
            A  +F ++ + G+     TY++ IDG CK+                             
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457

Query: 431 ------GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
                 G + EA+  F         L+   +N LIDG  +  R +   +++  +    ++
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+VVTY ++++GL   G++D+A  LF  + +   +PD I +  LI GF +  +P+   ++
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVK 569
              M+   + PD  I ++++++  +
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 188/374 (50%), Gaps = 13/374 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           + F ++  MLR     P V   ++L+  L++    D  L         GL  N Y +N L
Sbjct: 433 DGFGLYGIMLR-KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+   ++ R   G   +  +      P+  T+  L+KGL  + R+ EA ALF +L   G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ I Y TLI+G C+       L +F+ M + NG       P+   Y+ +I+   +EG 
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQS-NGIF-----PDICIYNVLINMFFREGC 605

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V+    L  ++    + PD+VTYN++I G C    +++A +LF  +     QP+ +TF +
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK+ +MD+A  +   M++RG  PN  TY+ L+DG+        A EL+  M    
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + VSY+ILI+G CK   +EEA   ++  + + + P V+ Y  L  G  ++ ++  A+
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 403 KLFDEMQRDGVAAD 416
            L+D M  +G+  D
Sbjct: 786 MLYDHMLVNGIMPD 799



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 12/298 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIG 110
           ++ M+   P V ++ +L+  LA+    D       +L   G  P+   Y  LI+ FCK  
Sbjct: 510 LMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKR 569

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
             + G   F  +  +   P+   +N LI     E  +     L  ++  +G EP+++TYN
Sbjct: 570 DPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYN 629

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           T+I G C       A+ LFE +  G        +PN +T++ +ID  CK+G +D A  +F
Sbjct: 630 TMICGYCSLKIFSKAIKLFEVLKCGR------TQPNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             M +    P+++TY+ LI G     +   A  L+ +M+   V P++V++++++D LCK 
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             M+EAS      + R + P+   Y  L+ G+C +G++  A  L+  M   G   DD+
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDL 801



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 172/366 (46%), Gaps = 25/366 (6%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-----------------GVQPSVVTFNVIM 284
           V ++  + H L     ++ A R+F  M+ Q                 G  PS V ++ ++
Sbjct: 89  VQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTV-YSFLL 147

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              C+N  +D A      M + GV  +    + ++D   L+   +R + +  + E M CK
Sbjct: 148 HCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLD---LLIDSDRIDVILENYEEM-CK 203

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              V Y  + N + K  EVE+ L+ +R +V +G+ P +V  N +  GL   +Q+  A   
Sbjct: 204 GLGV-YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDF 262

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           FD M R G + +  T++T I+  CK   + EA  L+  +       D+  Y+ LI+GL +
Sbjct: 263 FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFR 322

Query: 465 SGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +G+L+    LF  +L  GV + +VV ++ ++      G + KA +++  M +   +P+V+
Sbjct: 323 AGKLEEGNSLFSMALARGVKM-DVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           T+ +LI+G  R     +   +  ++ ++ + P     S ++D   K+E        + + 
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 584 ERQGEV 589
            R+G V
Sbjct: 442 LRKGHV 447



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  IF  ML   P P  + +++ L+    K ++ ++      ++    + PN+ +Y+I
Sbjct: 677 DDAMLIFSSMLERGPEPN-ILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  CK G +    +AF   +     P+   +  LI+G     R+ EA  L+  +   G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 162 CEPN 165
             P+
Sbjct: 796 IMPD 799


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 259/520 (49%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S++++L  L        A N  YD  + + G+ P ++T
Sbjct: 163 PGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYD--MLSKGVSPTVFT 220

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + I++   C    V         + +    PN+  + +LI  L  ++++ EA  L  ++ 
Sbjct: 221 FGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMF 280

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+V T+N +I+GLC+      A  L + M            P+ +TY  ++ GLC
Sbjct: 281 VMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG------FYPDNMTYGFLLHGLC 334

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-MMDQGVQPSV 277
           + G +++A+ + +++      P+    N+LI+G   +    EA+    E M++ G QP +
Sbjct: 335 RIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+N++M  LCK   +  A  L++ M +RG  PN  TY  L++G C  G +  A  +   
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHE 450

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G   + V YN LI   C+ ++V  AL+L  EM +KG KP + TYN+L  GL ++ +
Sbjct: 451 MSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDR 510

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A +LF  M  DG  A+  TY T I  L + G   +A+ L   +    C LD   YN 
Sbjct: 511 IDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNG 570

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI   CK G ++   EL+  +    L  + ++ NIMI GLC  G++D A +   D     
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
             PD++T++ +++G  ++    +   L  +++ + V PDA
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 224/440 (50%), Gaps = 17/440 (3%)

Query: 65  PPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN ++  L K NK +D      R+   G +P+  TY  L++  C+IG+++     
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA--- 342

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEPNVITYNTLINGLC 177
             +IL     PN A  N+LI G     ++ EA +   + +  FG +P++ TYN L++GLC
Sbjct: 343 -RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC 401

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A +L  EM+         C+PN +TY+ +++GLCK G +++A  +  +M    
Sbjct: 402 KEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           +  + V YN LI  LC     + A  L  EM  +G +P + T+N ++  LCK  ++DEA 
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           RL   M+  G   N  TYNTL+      G   +A  L   M   GC  D ++YN LI  +
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   +E+ L LY +M+  G+    ++ N +  GL ++ +V++A +   +    G   D 
Sbjct: 576 CKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDI 635

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY + ++GLCK G I EA+ LF  L++     D   YN  I   CK G +  A   F  
Sbjct: 636 VTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYR 695

Query: 478 LPHGVLVPNVVTYNIMIQGL 497
                 VP+ +T+N+++  L
Sbjct: 696 GIENGFVPSNLTWNVLVYTL 715



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 238/480 (49%), Gaps = 15/480 (3%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSL 114
           H   P    +  L+ +L++       L         G  P++ T+N +I+  CK+ ++  
Sbjct: 247 HGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHD 306

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                 R+L   F P+  T+  L+ GL    ++ EA  +  K+      PN    NTLIN
Sbjct: 307 ATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLIN 362

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G   +G    A +   E       I    +P+  TY+ ++ GLCKEG +  A+ L  +M 
Sbjct: 363 GYVMSGQLKEAQSFLNETM-----INFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                P+V+TY  L++GLC A    EA  +  EM  +G+  + V +N ++  LC+  K+ 
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  LL  M  +G +P+  TYN+L+ G C + +I+ A  LF +M   G   ++V+YN LI
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +   +    ++AL+L  +M+ +G     +TYN L     ++  +E  L+L+++M  DG+ 
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
           ADT +    I+GLCK G +  A E  R         DI  YN +++GLCK GR+K A  L
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  L    + P+  TYN  I   C +G ++ A   F    EN   P  +T+++L++  ++
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 222/477 (46%), Gaps = 11/477 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P   +Y++++          +    F  +L    +P   TF  ++K L   + +  A +L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              +   GC PN I Y TLI+ L +      AL L EEM        + C P+  T++ +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM------FVMGCMPDVQTFNDV 294

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I GLCK   +  A  L  +M      PD +TY  L+HGLC     NEA+++ I++     
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----P 350

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            P+    N +++    + ++ EA   L + M+  G +P+  TYN LM G C  G ++ A 
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M   GC+ + ++Y IL+NG CK   +EEA  +  EM ++G+    V YN L   L
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               +V  AL L  EM   G   D  TY + I GLCK   I EA  LF  + +     + 
Sbjct: 471 CRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANN 530

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI  L + G  + A  L   +       + +TYN +I+  C  G ++K  +L+  
Sbjct: 531 VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQ 590

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M  +    D I+ +++I+G  ++ +     E L     +  +PD    + V++ L K
Sbjct: 591 MIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 170/350 (48%), Gaps = 12/350 (3%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++NIL+  L K       +     ++  G  PN+ TY IL+N  CK G +    + 
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +     T N+  +N LI  L  + ++  A  L +++   GC+P++ TYN+LI GLC+
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  LF  M   +G +      N VTY+T+I  L + G   KA  L   M     
Sbjct: 508 VDRIDEAFRLFHNMLL-DGAVA-----NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGC 561

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D +TYN LI   C   +  +   L+ +M+  G+    ++ N++++ LCK  K+D A  
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE 621

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L   + RG  P+  TYN++++G C +G+I  A  LF  ++  G + D  +YN  I+  C
Sbjct: 622 FLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC 681

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           K   V +A S +   +  G  P+ +T+N L   L +    E+   + DE+
Sbjct: 682 KEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 187/390 (47%), Gaps = 15/390 (3%)

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTI--IDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           L +FE +    G     C    V Y  I  +  + K   +DK   L +QMK+E I     
Sbjct: 96  LEIFERVGGQKG----YCHTFDVYYVFINKLGAIGKFKLIDK---LLMQMKEEGIVFRES 148

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            +  ++     A    +A RL ++M    + +P+  +++++++ L        A+ +   
Sbjct: 149 IFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYD 208

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+ +GV P   T+  +M   C+  +++ A  L   M   GC  + + Y  LI+   +  +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V EAL L  EM   G  P V T+N +  GL +++++  A KL D M   G   D  TY  
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC-SLPHG 481
            + GLC+ G + EA ++   L  + C  +    N LI+G   SG+LK A      ++ + 
Sbjct: 329 LLHGLCRIGKLNEARKI---LIKIPCP-NNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++ TYNI++ GLC +G +  ARDL  +M      P+VIT+ +L++G  +     + 
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +LH+M  + +  ++ I + ++  L + E
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKE 474


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 259/520 (49%), Gaps = 21/520 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYT 98
           P +A  +   M  ++   P   S++++L  L        A N  YD  + + G+ P ++T
Sbjct: 163 PGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYD--MLSKGVSPTVFT 220

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + I++   C    V         + +    PN+  + +LI  L  ++++ EA  L  ++ 
Sbjct: 221 FGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMF 280

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+V T+N +I+GLC+      A  L + M            P+ +TY  ++ GLC
Sbjct: 281 VMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG------FYPDNMTYGFLLHGLC 334

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-MMDQGVQPSV 277
           + G +++A+ + +++      P+    N+LI+G   +    EA+    E M++ G QP +
Sbjct: 335 RIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+N++M  LCK   +  A  L++ M +RG  PN  TY  L++G C  G +  A  +   
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHE 450

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M + G   + V YN LI   C+ ++V  AL+L  EM +KG KP + TYN+L  GL ++ +
Sbjct: 451 MSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDR 510

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A +LF  M  DG  A+  TY T I  L + G   +A+ L   +    C LD   YN 
Sbjct: 511 IDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNG 570

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI   CK G ++   EL+  +    L  + ++ NIMI GLC  G++D A +   D     
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
             PD++T++ +++G  ++    +   L  +++ + V PDA
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 224/440 (50%), Gaps = 17/440 (3%)

Query: 65  PPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN ++  L K NK +D      R+   G +P+  TY  L++  C+IG+++     
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA--- 342

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEPNVITYNTLINGLC 177
             +IL     PN A  N+LI G     ++ EA +   + +  FG +P++ TYN L++GLC
Sbjct: 343 -RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC 401

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A +L  EM+         C+PN +TY+ +++GLCK G +++A  +  +M    
Sbjct: 402 KEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           +  + V YN LI  LC     + A  L  EM  +G +P + T+N ++  LCK  ++DEA 
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           RL   M+  G   N  TYNTL+      G   +A  L   M   GC  D ++YN LI  +
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   +E+ L LY +M+  G+    ++ N +  GL ++ +V++A +   +    G   D 
Sbjct: 576 CKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDI 635

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY + ++GLCK G I EA+ LF  L++     D   YN  I   CK G +  A   F  
Sbjct: 636 VTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYR 695

Query: 478 LPHGVLVPNVVTYNIMIQGL 497
                 VP+ +T+N+++  L
Sbjct: 696 GIENGFVPSNLTWNVLVYTL 715



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 238/480 (49%), Gaps = 15/480 (3%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSL 114
           H   P    +  L+ +L++       L         G  P++ T+N +I+  CK+ ++  
Sbjct: 247 HGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHD 306

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                 R+L   F P+  T+  L+ GL    ++ EA  +  K+      PN    NTLIN
Sbjct: 307 ATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLIN 362

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G   +G    A +   E       I    +P+  TY+ ++ GLCKEG +  A+ L  +M 
Sbjct: 363 GYVMSGQLKEAQSFLNETM-----INFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                P+V+TY  L++GLC A    EA  +  EM  +G+  + V +N ++  LC+  K+ 
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  LL  M  +G +P+  TYN+L+ G C + +I+ A  LF +M   G   ++V+YN LI
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +   +    ++AL+L  +M+ +G     +TYN L     ++  +E  L+L+++M  DG+ 
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
           ADT +    I+GLCK G +  A E  R         DI  YN +++GLCK GR+K A  L
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  L    + P+  TYN  I   C +G ++ A   F    EN   P  +T+++L++  ++
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 222/477 (46%), Gaps = 11/477 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P   +Y++++          +    F  +L    +P   TF  ++K L   + +  A +L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              +   GC PN I Y TLI+ L +      AL L EEM        + C P+  T++ +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM------FVMGCMPDVQTFNDV 294

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I GLCK   +  A  L  +M      PD +TY  L+HGLC     NEA+++ I++     
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----P 350

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            P+    N +++    + ++ EA   L + M+  G +P+  TYN LM G C  G ++ A 
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFAR 410

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M   GC+ + ++Y IL+NG CK   +EEA  +  EM ++G+    V YN L   L
Sbjct: 411 DLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICAL 470

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               +V  AL L  EM   G   D  TY + I GLCK   I EA  LF  + +     + 
Sbjct: 471 CRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANN 530

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI  L + G  + A  L   +       + +TYN +I+  C  G ++K  +L+  
Sbjct: 531 VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQ 590

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M  +    D I+ +++I+G  ++ +     E L     +  +PD    + V++ L K
Sbjct: 591 MIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 12/350 (3%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++NIL+  L K       +     ++  G  PN+ TY IL+N  CK G +    + 
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +     T N+  +N LI  L  + ++  A  L +++   GC+P++ TYN+LI GLC+
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  LF  M   +G +      N VTY+T+I  L + G   KA  L   M     
Sbjct: 508 VDRIDEAFRLFHNMLL-DGAVA-----NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGC 561

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D +TYN LI   C   +  +   L+ +M+  G+    ++ N++++ LCK  K+D A  
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE 621

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L   + RG  P+  TYN++++G C +G+I  A  LF  ++  G + D  +YN  I+  C
Sbjct: 622 FLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQC 681

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           K   V +A   +   +  G  P+ +T+N L   L +    E+   + DE+
Sbjct: 682 KEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 187/390 (47%), Gaps = 15/390 (3%)

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTI--IDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           L +FE +    G     C    V Y  I  +  + K   +DK   L +QMK+E I     
Sbjct: 96  LEIFERVGGQKG----YCHTFDVYYVFINKLGAIGKFKLIDK---LLMQMKEEGIVFRES 148

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            +  ++     A    +A RL ++M    + +P+  +++++++ L        A+ +   
Sbjct: 149 IFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYD 208

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+ +GV P   T+  +M   C+  +++ A  L   M   GC  + + Y  LI+   +  +
Sbjct: 209 MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQ 268

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V EAL L  EM   G  P V T+N +  GL +++++  A KL D M   G   D  TY  
Sbjct: 269 VSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGF 328

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC-SLPHG 481
            + GLC+ G + EA ++   L  + C  +    N LI+G   SG+LK A      ++ + 
Sbjct: 329 LLHGLCRIGKLNEARKI---LIKIPCP-NNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P++ TYNI++ GLC +G +  ARDL  +M      P+VIT+ +L++G  +     + 
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +LH+M  + +  ++ I + ++  L + E
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKE 474


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 219/427 (51%), Gaps = 7/427 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P AATFN++  G     R+ +   ++  +   G       Y  LI+ LC+ G+   A  L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              M           K   + YSTII+ LCK   V++A+ L  +M      PD +TY  +
Sbjct: 68  LHTMRLKR------FKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPI 120

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           +  LC     ++A     EM  +G++P    +N ++  LC+  K++EA  L + MV++ +
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            PN  TYNTL++G C   +I  A ELF  M   G    +VSYN LI+G+CK K++  A  
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++ +MV     P VVTY TL  GL +  +V+ A ++ D M + GV  +  TY+  IDG C
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K   + EA +L   +        +  YN L++ LC++ +L+ A++LF  +      P VV
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TYN +++ LC+  Q+D A  L+ +M      PD IT+D L  G  R  +  +  EL+ KM
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420

Query: 549 KEKKVMP 555
           K  K  P
Sbjct: 421 KLTKRNP 427



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 214/429 (49%), Gaps = 7/429 (1%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P   T+N + + F K GR+      +  ++ + +T  A+ +  LI  L       EA 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L   ++    +   I Y+T+IN LC+      A  L E+MA           P+ +TY 
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-------YAPPDALTYG 118

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            I++ LCK   +D A A   +M    I PD   YN ++ GLC      EA+ LF +M+ Q
Sbjct: 119 PIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P+VVT+N +++ LCK  +++ A  L   M  +G  P   +YNTL+DGFC    +  A
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +++F  M    C  + V+Y  LI+G  K+ +V+ A  +   MV KG+ P V TY+ L  G
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDG 298

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             ++ +V+ A KL ++M   G+A    TY   ++ LC+   + +A +LFR +   +C   
Sbjct: 299 FCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPT 358

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN L+  LC   +L  A  L+  +      P+ +TY+ +  GL   G++ +A++L  
Sbjct: 359 VVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELME 418

Query: 512 DMEENAAAP 520
            M+     P
Sbjct: 419 KMKLTKRNP 427



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 176/331 (53%), Gaps = 14/331 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNIL 102
           EA  + + M R   +PP   ++  ++  L K K  D  L         G+ P+ + YN +
Sbjct: 98  EARELIEKMARY--APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFV 155

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  C+  +V    + F ++++    PN  T+N+LI GL    RI  A  LF ++   G 
Sbjct: 156 LSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 215

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P  ++YNTLI+G C+    + A ++F++M   N      C PN VTY+T+IDGL K G 
Sbjct: 216 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN------CVPNVVTYTTLIDGLSKSGK 269

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V  A  +   M  + + P+V TY+ LI G C     +EA +L  +M+ QG+ P+VVT+N+
Sbjct: 270 VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNI 329

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LC+  K+++A +L   M QR   P   TYNTL+   C   +++ A  L+  M + G
Sbjct: 330 LLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           C  D ++Y+ L  G  +  +V EA  L  +M
Sbjct: 390 CPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 160/304 (52%), Gaps = 18/304 (5%)

Query: 36  TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPN 95
           T  E     I P+ AF I++++L        V    +L   + K      R+N     PN
Sbjct: 136 TVEEMATRGIKPD-AF-IYNFVLSGLCQEEKVEEARLLFEKMVKQ-----RIN-----PN 183

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           + TYN LIN  CK  R+   +  F  +    + P   ++N+LI G   +  ++ A  +F 
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           K+    C PNV+TY TLI+GL ++G    A     E+ +G  + GV   PN  TYS +ID
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAA----AEVLDGMVKKGVT--PNVATYSCLID 297

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           G CK   VD+A  L  QM  + I P VVTYN L++ LC A+   +A +LF  M  +   P
Sbjct: 298 GFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VVT+N ++  LC ++++D A RL   M+ +G  P+A TY+TL  G    GK++ A+EL 
Sbjct: 358 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417

Query: 336 GSME 339
             M+
Sbjct: 418 EKMK 421



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 169/339 (49%), Gaps = 1/339 (0%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    + P   T+N++  G   A    + K ++  M++ G       + +++  LCK   
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            DEA +LL  M  +  +  A  Y+T+++  C + ++  A EL   M       D ++Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++   CK K +++AL+   EM ++GIKP    YN +  GL +  +VE A  LF++M +  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +  TY T I+GLCK   I  A ELF+ +          +YN LIDG CK   L  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F  +     VPNVVTY  +I GL   G++  A ++   M +    P+V T+  LI GF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            ++    + ++LL +M  + + P     +I+++ L + +
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 338


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 277/577 (48%), Gaps = 53/577 (9%)

Query: 34  DLTTREGDINVITPNEAFCIFDYML-RMHPS--PPPVSSFNILLASLAKNKHYDT----- 85
           D+ T    INV+    +F    Y++ +M  S   P + ++N +L    K   +       
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251

Query: 86  -RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
             + + G+  ++ TYN+LI+  C+  R++ G++    + +    PN  T+N+LI G   E
Sbjct: 252 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 311

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVC 203
            +++ A+ L  ++ +FG  PN +T+N LI+G    G+   AL +F  M A G        
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-------L 364

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+ V+Y  ++DGLCK    D A+  +++MK   +    +TY  +I GLC     +EA  
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  EM   G+ P +VT++ +++  CK  +   A  ++  + + G+ PN   Y+TL+   C
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            MG +  A  ++ +M   G   D  ++N+L+   CK  +V EA    R M S GI P  V
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +++ L  G     +   A  +FDEM + G      TY + + GLCK G++ EA +  ++L
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
             +   +D   YN L+  +CKSG L  A  LF  +    ++P+  TY  +I GLC  G+ 
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 664

Query: 504 ---------DKARD----------LFLD-----------------MEENAAAPDVITFDM 527
                     +AR            F+D                 M+     PD++T + 
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +I G+ R+ +  K N+LL +M  +   P+ +  +I++
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 245/483 (50%), Gaps = 12/483 (2%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G+ S  F A     R C   N + ++ LI+    E  I ++  +F  +  +G  P+V T 
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N ++  + ++G  +   +  +EM         +C P+  T++ +I+ LC EG  +K+  L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+     P +VTYN+++H  C    +  A  L   M  +GV   V T+N+++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           + ++ +   LL  M +R + PN  TYNTL++GF   GK+  A +L   M S G   + V+
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +N LI+G+      +EAL ++  M +KG+ P+ V+Y  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R+GV     TYT  IDGLCKNG++ EAV L   +     + DI  Y+ LI+G CK GR K
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A E+ C +    L PN + Y+ +I   C  G + +A  ++  M       D  TF++L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI-SLKSLPSFLVQERQGE 588
               +  + ++  E +  M    ++P+    ++  D L+     S + L +F V +   +
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPN----TVSFDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 589 VGE 591
           VG 
Sbjct: 572 VGH 574



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 252/528 (47%), Gaps = 39/528 (7%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN  TYN LIN F   G+V +       +L    +PN  TFN+LI G  +E    EA 
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG--------NGEIGVV 202
            +F  ++A G  P+ ++Y  L++GLC+     +A   +  M  NG         G I  +
Sbjct: 354 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413

Query: 203 CK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           CK                    P+ VTYS +I+G CK G    AK +  ++    ++P+ 
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           + Y++LI+  C      EA R++  M+ +G      TFNV++  LCK  K+ EA   +  
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 533

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G+ PN  +++ L++G+   G+  +A  +F  M  +G      +Y  L+ G CK   
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + EA    + + +       V YNTL   + +   +  A+ LF EM +  +  D+ TYT+
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQA-YNCLIDGLCKSGRLK---FAWELFCSL 478
            I GLC+ G  + A+   +        L  +  Y C +DG+ K+G+ K   +  E   +L
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            H    P++VT N MI G    G+++K  DL  +M      P++ T+++L+HG+ +  + 
Sbjct: 714 GH---TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770

Query: 539 SKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKN--EISLKSLPSFLVQ 583
           S    L   +    ++PD  +  S+V+ +   N  EI LK L +F+ +
Sbjct: 771 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 230/459 (50%), Gaps = 9/459 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++YT N ++    K G     +     +L+    P+ ATFN LI  L AE    ++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           + L  K++  G  P ++TYNT+++  C+ G    A+ L + M +  G    VC     TY
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVC-----TY 266

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I  LC+   + K   L   M+   I+P+ VTYN+LI+G  +      A +L  EM+ 
Sbjct: 267 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VTFN ++D         EA ++  +M  +G+ P+  +Y  L+DG C   + + 
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   +  M+  G     ++Y  +I+G CKN  ++EA+ L  EM   GI P +VTY+ L  
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  ++ + + A ++   + R G++ +   Y+T I   C+ G + EA+ ++  + +     
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   +N L+  LCK+G++  A E    +    ++PN V+++ +I G  N G+  KA  +F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566

Query: 511 LDMEENAAAPDVITFDMLIHGFIR---INEPSKVNELLH 546
            +M +    P   T+  L+ G  +   + E  K  + LH
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 228/493 (46%), Gaps = 9/493 (1%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           +T+N+L+   CK G+V+     F R + S    PN  +F+ LI G       ++A ++F 
Sbjct: 509 FTFNVLVTSLCKAGKVAEAE-EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++   G  P   TY +L+ GLC+ GH   A    + +        V    +TV Y+T++ 
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH------AVPAAVDTVMYNTLLT 621

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQ 274
            +CK G + KA +LF +M   +I PD  TY SLI GLC       A     E   +G V 
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+ V +   +D + K  +        + M   G  P+  T N ++DG+  MGKI +  +L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M +     +  +YNIL++GY K K+V  +  LYR ++  GI P  +T ++L LG+ E
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            + +E  LK+       GV  D  T+   I   C NG I  A +L + +  L   LD   
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
            + ++  L ++ R + +  +   +    + P    Y  +I GLC  G +  A  +  +M 
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
            +   P  +    ++    +  +  +   LL  M + K++P  +  + ++ L  KN   +
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 981

Query: 575 KSLPSFLVQERQG 587
           ++L   +V    G
Sbjct: 982 EALELRVVMSNCG 994



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 234/492 (47%), Gaps = 14/492 (2%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
            +AF +FD M ++    P   ++  LL  L K  H      +   L+A     +   YN L
Sbjct: 561  KAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG- 161
            +   CK G ++     FG +++    P++ T+ SLI GL  + + + A     + +A G 
Sbjct: 620  LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              PN + Y   ++G+ + G     +   E+M N      +   P+ VT + +IDG  + G
Sbjct: 680  VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMG 733

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++K   L  +M ++N  P++ TYN L+HG     D + +  L+  ++  G+ P  +T +
Sbjct: 734  KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 282  VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             ++  +C++  ++   ++L   + RGV  +  T+N L+   C  G+IN A +L   M S+
Sbjct: 794  SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 342  GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
            G   D  + + +++   +N   +E+  +  EM  +GI P    Y  L  GL  +  ++ A
Sbjct: 854  GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 402  LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
              + +EM    +       +  +  L K G   EA  L R +  +K    I ++  L+  
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973

Query: 462  LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             CK+G +  A EL   + +  L  ++V+YN++I GLC  G M  A +L+ +M+ +    +
Sbjct: 974  CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033

Query: 522  VITFDMLIHGFI 533
              T+  LI G +
Sbjct: 1034 ATTYKALIRGLL 1045



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 47   PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYN 100
             +EA  +  +ML+M    P ++SF  L+    KN +    L      +  GL  +L +YN
Sbjct: 945  ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003

Query: 101  ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            +LI   C  G ++L F  +  +    F  NA T+ +LI+GL A       A +  K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 235/460 (51%), Gaps = 12/460 (2%)

Query: 54  FDYMLRMHPSP--PPVSSFNILLASL-AKNKHYDTRLNATGLFPNLYTYNILINCFCKIG 110
            D  LR+  S   P   +   L+  L A  +  + R       P++  YN ++  +C  G
Sbjct: 83  LDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMMAGYCGAG 142

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           +V     A           +A T ++LI+GL    R   A A+  ++    C P+V+TY 
Sbjct: 143 QVD---AARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT 199

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            L+   C+      A+ L +EM +        C P+ VTY+ +++G+C+EG VD A    
Sbjct: 200 ILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFL 253

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             +      P+ V+YN ++ GLC A  W +A+ L  EM  +G  P+VVTFN+++  LC+ 
Sbjct: 254 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 313

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
             ++ A  +L+ + + G  PN+ +YN L+  FC   K+++A      M S GC  D VSY
Sbjct: 314 GLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 373

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N L+   C++ EV+ A+ L  ++  KG  P +++YNT+  GL +  + + AL+L +EM  
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+  D  TY+T   GLC+   I +A+  F  ++ +    +   YN +I GLCK      
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           A +LF  +     +PN  TY I+I+GL  +G + +ARDL 
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 533



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 248/494 (50%), Gaps = 18/494 (3%)

Query: 74  LASLAKNKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           L SL +    D   RL  +   P+  T   LI      GR +       R+L +C  P+ 
Sbjct: 74  LRSLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEAR----RVLAAC-GPDV 128

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
             +N+++ G     ++ +AA  +   +A   E +  T +TLI GLC  G T  AL + +E
Sbjct: 129 MAYNAMMAGYCGAGQV-DAARRWCAERAV--ERDAYTCDTLIRGLCGRGRTANALAVLDE 185

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M          C P+ VTY+ +++  CK     +A  L  +M+D+   PD+VTYN +++G
Sbjct: 186 MLRRR------CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 239

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           +C     ++A      +   G +P+ V++N+++  LC   + ++A  L+  M Q+G  PN
Sbjct: 240 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 299

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             T+N L+   C  G +  A E+   +   GC  + +SYN L++ +CK K++++A++   
Sbjct: 300 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLD 359

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            MVS+G  P +V+YNTL   L    +V+ A++L  +++  G A    +Y T IDGL K G
Sbjct: 360 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
              EA+EL   +     + DI  Y+ +  GLC+  R++ A   F  +    + PN V YN
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 479

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM--K 549
            +I GLC   +   A DLF  M  N   P+  T+ +LI G        +  +LL ++  +
Sbjct: 480 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539

Query: 550 EKKVMPDASIVSIV 563
            ++++ D  ++ + 
Sbjct: 540 GEEILLDVHLIDVA 553



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 221/448 (49%), Gaps = 14/448 (3%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R++ S   P+A T  +LIK L A  R  EA  +        C P+V+ YN ++ G C  G
Sbjct: 88  RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCGAG 142

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A     E A          + +  T  T+I GLC  G    A A+  +M      P
Sbjct: 143 QVDAARRWCAERA---------VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVP 193

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DVVTY  L+   C  + + +A +L  EM D+G  P +VT+NV+++ +C+  ++D+A   L
Sbjct: 194 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 253

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             +   G  PN  +YN ++ G C   +   AEEL G M   GC  + V++N+LI+  C+ 
Sbjct: 254 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 313

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             VE AL +  ++   G  P  ++YN L     +  +++ A+   D M   G   D  +Y
Sbjct: 314 GLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 373

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T +  LC++G +  AVEL   L+   C   + +YN +IDGL K+G+ K A EL   +  
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+++TY+ +  GLC + +++ A   F  +++    P+ + ++ +I G  +  E   
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLV 568
             +L   M     MP+ S  +I+++ L 
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLA 521



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 195/409 (47%), Gaps = 14/409 (3%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  T   LI  L  +G T  A  +              C P+ + Y+ ++ G C  G 
Sbjct: 95  RPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMMAGYCGAGQ 143

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A+    +   E    D  T ++LI GLC       A  +  EM+ +   P VVT+ +
Sbjct: 144 VDAARRWCAERAVER---DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTI 200

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  CK     +A +LLD M  +G  P+  TYN +++G C  G+++ A E   ++ S G
Sbjct: 201 LLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 260

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C+ + VSYNI++ G C  +  E+A  L  EM  KG  P VVT+N L   L     VE AL
Sbjct: 261 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 320

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           ++ +++ + G + ++ +Y   +   CK   + +A+     +    C  DI +YN L+  L
Sbjct: 321 EVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 380

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+SG +  A EL   L      P +++YN +I GL   G+  +A +L  +M      PD+
Sbjct: 381 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 440

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           IT+  +  G  R +          K+++  + P+  + + ++  L K  
Sbjct: 441 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 489


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 158/526 (30%), Positives = 267/526 (50%), Gaps = 56/526 (10%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           R+G I      EA  +F+ M       P V S+N ++  L + +++D       R+   G
Sbjct: 88  RKGKIQ-----EAVDVFERM-DFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKG 141

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P++YT+ I +  FC+  R                 P+AA                   
Sbjct: 142 IVPDVYTFTIRMKSFCRTSR-----------------PHAAR------------------ 166

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L   + + GCE + + Y T+I G     H + A  LFEEM      +G+   P+ + ++
Sbjct: 167 RLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM------LGLGICPDIMAFN 220

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I  LC++G V +++ L  ++    ++P++ T N  I G C     NEA RL ++ + +
Sbjct: 221 KLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL-LDGVGR 279

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ P V+T+N ++  LCKN K+ EA   L  MV  G  P+  TYN+++DG+C +G +  A
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +++       G   D+ +Y  LING C++ +++ A++++ E + KG+KP +V  NTL  G
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL- 450
           L +   +  ALKL +EM  +G + D  TY   I+GLCK G + +A  L     I K  L 
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVID-AIAKGHLP 458

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  +N LIDG CK  +L  A E+   + +  + P+V+TYN ++ GLC  G+ +     F
Sbjct: 459 DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTF 518

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             M E    P++IT+++L   F +  +  +   L+ +M+ K + PD
Sbjct: 519 KLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 238/478 (49%), Gaps = 8/478 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++  +N LI+  C+ G V        ++L+   +PN  T N  I+G    + + EA
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEA 270

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   G  P+VITYNTLI GLC+    + A +   +M N   E      P+  TY
Sbjct: 271 IRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE------PDGFTY 323

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           ++IIDG CK G +  A  +      +   PD  TY SLI+GLC   D + A  +F E M+
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++P++V  N ++  L +   + +A +L++ M + G  P+  TYN +++G C +G ++ 
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSD 443

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+ L     + G   D  ++N LI+GYCK  +++ A+ +   M + G+ P V+TYN++  
Sbjct: 444 ADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILN 503

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  + E  +  F  M   G   +  TY    +  CK   + EA+ L   ++      
Sbjct: 504 GLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTP 563

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV-TYNIMIQGLCNDGQMDKARDL 509
           D+  +  L+ G C +G L  A++LF  +       + + TYNIMI        M+ A  L
Sbjct: 564 DVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKL 623

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           F  M EN  +PD  T+ ++I GF +    +     L    EK ++P  +    V++ L
Sbjct: 624 FNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 253/517 (48%), Gaps = 50/517 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EA  +F+ ML +   P  + +FN L+ +L +  H         ++   G+ PNL+T NI 
Sbjct: 199 EAHELFEEMLGLGICPD-IMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  FC+   ++        + R   TP+  T+N+LI GL    +++EA     K+   G 
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGRG-LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           EP+  TYN++I+G C+ G    A  +  + A      G V  P+  TY ++I+GLC++G 
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFK----GFV--PDESTYCSLINGLCQDGD 370

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A  +F +  ++ + P++V  N+L+ GL       +A +L  EM + G  P + T+N+
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++ LCK   + +A  L+   + +G  P+  T+NTL+DG+C   K++ A E+   M + G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++YN ++NG CK  + E+ +  ++ M+ KG  P ++TYN L     +  +VE AL
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR-------------TLRIL--- 446
            L +EMQ  G+  D   + T + G C NG +  A +LF+             T  I+   
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINA 610

Query: 447 ----------------KCE----LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
                            CE     D   Y  +IDG CK+G +   +          L+P+
Sbjct: 611 FAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPS 670

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           + T+  ++  LC   ++ +A  +   M      P+V+
Sbjct: 671 LTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 242/498 (48%), Gaps = 43/498 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNI 101
           NEA  + D + R     P V ++N L+  L KN      +HY  ++   G  P+ +TYN 
Sbjct: 268 NEAIRLLDGVGR--GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNS 325

Query: 102 LINCFCKIGRVSLGFIAFGRILR----SCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +I+ +CK+G +        +ILR      F P+ +T+ SLI GL  +  I  A  +F + 
Sbjct: 326 IIDGYCKLGMMQNA----DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G +PN++  NTL+ GL + G  + AL L  EM+  NG     C P+  TY+ +I+GL
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSE-NG-----CSPDIWTYNLVINGL 435

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G V  A  L +    +   PDV T+N+LI G C     + A  +   M + GV P V
Sbjct: 436 CKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDV 495

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +T+N I++ LCK  K ++      LM+++G  PN  TYN L + FC   K+  A  L   
Sbjct: 496 ITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIH 396
           M++ G   D V++  L+ G+C N +++ A  L++ +  +     T+ TYN +        
Sbjct: 556 MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKL 615

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQAY 455
            +  A KLF++M  +G + D+ TY   IDG CK G I      F  ++I K  +  +  +
Sbjct: 616 NMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYS-FLLVKIEKGLIPSLTTF 674

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             +++ LC   R+  A  +   + H  +VP VV                    +F   ++
Sbjct: 675 GRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN------------------TIFEADKK 716

Query: 516 NAAAPDVITFDMLIHGFI 533
             AAP ++  +++  G I
Sbjct: 717 EVAAPKIVVENLMKKGHI 734



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 226/481 (46%), Gaps = 47/481 (9%)

Query: 127 FTPNAATFNSLIK--GLHAESRIMEAAALFTKLKA-FGCEPNVITYNTLINGLCRTGHTM 183
           F     T+  +I+  G H E   ME     T++    G    V  Y   +    R G   
Sbjct: 36  FKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--YIGAMRNYGRKGKIQ 93

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV- 242
            A+++FE M   N      C+P+  +Y+ I++ L +  + D+A  ++++M+D+ I PDV 
Sbjct: 94  EAVDVFERMDFFN------CEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 243 ----------------------------------VTYNSLIHGLCHANDWNEAKRLFIEM 268
                                             V Y ++I G    N   EA  LF EM
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G+ P ++ FN ++  LC+   + E+ RLL+ +++RGV PN  T N  + GFC    +
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           N A  L   +   G   D ++YN LI G CKN +V EA    R+MV++G +P   TYN++
Sbjct: 268 NEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  ++  +++A ++  +    G   D  TY + I+GLC++G I  A+ +F        
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + ++   N L+ GL + G +  A +L   +      P++ TYN++I GLC  G +  A +
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           L +D       PDV TF+ LI G+ +  +     E++ +M    V PD    + +++ L 
Sbjct: 447 LVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLC 506

Query: 569 K 569
           K
Sbjct: 507 K 507


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 251/534 (47%), Gaps = 47/534 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N L+ SL K +++D       R+   GL PN  TY+ILI+ FC+ G++      
Sbjct: 365 PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G ++     P+   +NSLI G      I  A +L  ++     EP V+TY +L+ G C 
Sbjct: 425 LGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCS 484

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL L+ EM  G G +     P+  T++T++ GL + G +  A  LF +M + N+
Sbjct: 485 KGKINKALRLYHEM-TGKGIV-----PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VTYN +I G C   + ++A     EM+++G+ P   ++  ++  LC   +  EA  
Sbjct: 539 KPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            +D + +     N   Y  L+ GFC  GK+  A  +   M   G   D V Y +LI+G  
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSL 658

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+K+ +  L L +EM  +G+KP  V Y ++     +    + A  ++D M  +G   +  
Sbjct: 659 KHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLR---------ILKCELDI----------------- 452
           TYT  I+GLCK G++ EA  L   +R            C LDI                 
Sbjct: 719 TYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNA 778

Query: 453 ---------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                      YN LI G C+ GR++ A EL   +    + P+ +TY  MI  LC    +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDV 838

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            KA +L+  M E    PD + ++ LIHG     E  K  EL ++M  + + P+ 
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/515 (29%), Positives = 247/515 (47%), Gaps = 12/515 (2%)

Query: 67  VSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           +  +N+L+  L K +           L    L P++ TY  L+   CK+    +G     
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMID 321

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +LR  F+P+ A  +SL++GL    ++ EA  L  ++  FG  PN+  YN LI+ LC+  
Sbjct: 322 EMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +   A  LF+ M    G+IG+   PN VTYS +ID  C+ G +D A +   +M D  + P
Sbjct: 382 NFDEAELLFDRM----GKIGLC--PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V  YNSLI+G C   D + A+ L  EM+++ ++P+VVT+  +M   C   K+++A RL 
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  +G+ P+  T+ TL+ G    G I  A +LF  M     K + V+YN++I GYC+ 
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             + +A     EM+ KGI P   +Y  L  GL    Q   A    D + +     +   Y
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  + G C+ G + EA+ + + + +   +LD+  Y  LIDG  K    K    L   +  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHD 675

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P+ V Y  MI      G   +A  ++  M      P+ +T+  +I+G  +    ++
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
              L  KM+    +P+       +D+L K    +K
Sbjct: 736 AEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMK 770



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 240/485 (49%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +    L P + T + L++   K     L    F  ++     P+   +  +I+ L     
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A  +  +++A GC+ N++ YN LI+GLC+      A+ + +++A      G   KP+
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA------GKELKPD 296

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY T++ GLCK    +    +  +M     +P     +SL+ GL       EA  L  
Sbjct: 297 VVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVK 356

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            + + GV P++  +N ++D LCK R  DEA  L D M + G+ PN  TY+ L+D FC  G
Sbjct: 357 RVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRG 416

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K++ A    G M  MG K     YN LING+CK  ++  A SL  EM++K ++PTVVTY 
Sbjct: 417 KLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L  G     ++  AL+L+ EM   G+     T+TT + GL + G I +AV+LF  +   
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + +   YN +I+G C+ G +  A+E    +    +VP+  +Y  +I GLC  GQ  +A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           +     + +     + I +  L+HGF R  +  +   +   M  + V  D     +++D 
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656

Query: 567 LVKNE 571
            +K++
Sbjct: 657 SLKHK 661



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 163/534 (30%), Positives = 275/534 (51%), Gaps = 28/534 (5%)

Query: 53  IFDYMLRMH--PSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILIN 104
           + D MLR+   PS   VSS   L+  L K    +  LN        G+ PN++ YN LI+
Sbjct: 319 MIDEMLRLRFSPSEAAVSS---LVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALID 375

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             CK        + F R+ +    PN  T++ LI       ++  A +   ++   G +P
Sbjct: 376 SLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V  YN+LING C+ G    A +L  EM N   E      P  VTY++++ G C +G ++
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLE------PTVVTYTSLMGGYCSKGKIN 489

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           KA  L+ +M  + I P + T+ +L+ GL  A    +A +LF EM +  V+P+ VT+NV++
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           +  C+   M +A   L+ M+++G+ P+  +Y  L+ G CL G+ + A+     +    C+
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +++ Y  L++G+C+  ++EEALS+ ++M  +G+   +V Y  L  G  +    +  L L
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGL 669

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             EM   G+  D   YT+ ID   K G   EA  ++  +    C  +   Y  +I+GLCK
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729

Query: 465 SGRLKFAWELFCS-LPHGVLVPNVVTY----NIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G +  A E+ CS +  G  VPN VTY    +I+ +G+   G M KA +L   + +   A
Sbjct: 730 AGFVNEA-EILCSKMRPGNSVPNQVTYGCFLDILTKGV---GDMKKAVELHNAILKGLLA 785

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKNEI 572
            +  T++MLI GF R     + +EL+ +M    V PD  +  +++ +L  +N++
Sbjct: 786 -NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDV 838



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 230/525 (43%), Gaps = 85/525 (16%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EA  +FD M ++   P  V+ ++IL+    +    DT L+        GL P++Y YN 
Sbjct: 384 DEAELLFDRMGKIGLCPNDVT-YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNS 442

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN  CK G +S        ++     P   T+ SL+ G  ++ +I +A  L+ ++   G
Sbjct: 443 LINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P++ T+ TL++GL R G    A+ LF EMA  N       KPN VTY+ +I+G C+EG
Sbjct: 503 IVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN------VKPNRVTYNVMIEGYCEEG 556

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLI-------------------------------- 249
            + KA     +M ++ I PD  +Y  LI                                
Sbjct: 557 NMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616

Query: 250 ---HGLCHANDWNEA-------------------------------KRLFI----EMMDQ 271
              HG C      EA                               +++F+    EM D+
Sbjct: 617 GLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G++P  V +  ++D   K     EA  + DLM+  G  PN  TY  +++G C  G +N A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKN-KEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           E L   M       + V+Y   ++   K   ++++A+ L+  ++ KG+     TYN L  
Sbjct: 737 EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIR 795

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G     ++E A +L   M  DGV+ D  TYTT I  LC+   + +A+EL+ ++       
Sbjct: 796 GFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRP 855

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           D  AYN LI G C +G +  A EL   +    L PN  T    I 
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 53/282 (18%)

Query: 342 GCKHDDVSYNILING--------------------------------------------- 356
           G  H   S+ ILI+                                              
Sbjct: 99  GFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSSSSS 158

Query: 357 -------YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
                  Y +++ V + + +++ M++K  + P V T + L  GL +      A++LFD+M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G+  D   YT  I  LC+   +  A E+   +    C+++I  YN LIDGLCK  ++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A  +   L    L P+VVTY  ++ GLC   + +   ++  +M     +P       L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + G  +  +  +   L+ ++ E  V P+  + + ++D L K 
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKG 380


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 241/476 (50%), Gaps = 13/476 (2%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           H++  L+ T       +YN L     + G +      F  +L     PN  +FN+++   
Sbjct: 148 HHEFSLSVT-------SYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAH 200

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                ++ A A F  L  FG   +  TY +LI G C+      A  +FE M         
Sbjct: 201 CKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEG----- 255

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
            C  N V+Y+ +I G C+ G +D+A  LF QMK++   PDV TY  L+   C      EA
Sbjct: 256 -CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEA 314

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            + F EM++ G++P+V T+ V++D  CK  KMDE   +L  M+++G+  +   +N L+DG
Sbjct: 315 LKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDG 374

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +C  G +  A  +  SM+      +  +YN LI G+C+ K ++ A++L  +M    + P 
Sbjct: 375 YCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           +VTYNTL  GL +   V+ A +L   M +DG   D RT+  FID LCK G + +A ++F 
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFE 494

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           +L+    E +   Y  LIDG CK+ +   A  LF  +      PN +T+N+++ GL  +G
Sbjct: 495 SLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEG 554

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           +++ A  L   M +  A P V T+ +LI   +R ++  + N  L +M      P+ 
Sbjct: 555 KVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNV 610



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 241/500 (48%), Gaps = 32/500 (6%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G FP++ TY +L+  FC++G+ +     F  ++ +   PN  T+  LI       
Sbjct: 285 QMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVG 344

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ E   + + +   G   +V+ +N LI+G C+ G    A+ + + M     ++  VC P
Sbjct: 345 KMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSM-----KLNKVC-P 398

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N+ TY+ +I G C++  +D+A AL  +M +  ++P++VTYN+LIHGLC A   + A RL 
Sbjct: 399 NSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLH 458

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+  G  P   TF   +D LCK  K+++A ++ + + ++    N   Y  L+DG+C  
Sbjct: 459 HLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKA 518

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            K + A  LF  M   GC  + +++N+L++G  K  +VE+A+SL   M     KPTV TY
Sbjct: 519 EKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY 578

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L   +      + A    D+M   G   +  TYT FI   C+ G ++EA E+   ++ 
Sbjct: 579 TILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKE 638

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL-------- 497
               LD   Y+ L++     G+L  A+ +   +      P+  TY+I+++ L        
Sbjct: 639 EGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKE 698

Query: 498 ------------CNDGQMDKARD------LFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                        ++  + K  D      LF  M E    P+V T+  LI G  ++   S
Sbjct: 699 GMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLS 758

Query: 540 KVNELLHKMKEKKVMPDASI 559
               L + MKE  + P  +I
Sbjct: 759 LAFRLFNHMKESGISPSENI 778



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 232/512 (45%), Gaps = 39/512 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +A C+ D M +++   P   ++N L+    + K  D       ++    L PNL TYN L
Sbjct: 383 DAICVLDSM-KLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTL 441

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK   V   +     +++  F P+  TF + I  L    ++ +A  +F  LK    
Sbjct: 442 IHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA 501

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           E N   Y  LI+G C+      A  LF+ M      +   C PN++T++ ++DGL KEG 
Sbjct: 502 EANEFLYTALIDGYCKAEKFSDAHLLFKRM------LFEGCFPNSITFNVLLDGLRKEGK 555

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V+ A +L   M   +  P V TY  LI  +   +D++ A     +M+  G QP+VVT+  
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +   C+  ++ EA  ++  + + G+  ++  Y+ L++ +  +G+++ A  +   M   G
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSL--------------------------YREMVSK 376
           C+    +Y+IL+      K  +E + L                          + +MV +
Sbjct: 676 CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQ 735

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P V TY+ L  GL ++  +  A +LF+ M+  G++     + + +   CK G   EA
Sbjct: 736 GCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEA 795

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           + L  ++        +++Y  L+ GL + G  + A E+F SL       + V + +++ G
Sbjct: 796 LRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDG 855

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           L   G +D+   L   ME+        T  ML
Sbjct: 856 LVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 185/366 (50%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  +Y+ +   L + G +D+   LF  M ++ + P+++++N++++  C   +   AK  F
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             +M  G      T+  ++   CK  ++ +A ++ ++M Q G   N  +Y  L+ GFC +
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GKI+ A ELF  M+  GC  D  +Y +L+  +C+  +  EAL  + EMV  GI+P V TY
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTY 333

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L     ++ +++  +++   M   G+ +    +   IDG CK G + +A+ +  ++++
Sbjct: 334 TVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL 393

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            K   + + YN LI G C+   +  A  L   +    L PN+VTYN +I GLC    +D 
Sbjct: 394 NKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDS 453

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  L   M ++   PD  TF   I    ++ +  + +++   +KEK    +  + + ++D
Sbjct: 454 AWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALID 513

Query: 566 LLVKNE 571
              K E
Sbjct: 514 GYCKAE 519



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 149/533 (27%), Positives = 248/533 (46%), Gaps = 32/533 (6%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           P++ F I      + P      SFN L+ SL       T L++    PNL+    L   F
Sbjct: 42  PSQIFTIL-----LQPQWRKNPSFNTLIPSLTP-----THLSSLFNNPNLHPLTAL--NF 89

Query: 107 CKIGRVSLGFIAFGR--------ILRSCFTPNAATF-NSLIKGLHAESRIMEAAALFTKL 157
            K      GFI            ++R+ F   A    NS+IK   +     EA  +   L
Sbjct: 90  FKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSH---EARFVLNLL 146

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
                  +V +YN L   L R G  +  LN LF++M N   E      PN ++++T+++ 
Sbjct: 147 THHEFSLSVTSYNRLFMVLSRFG-LIDELNCLFKDMLNDGVE------PNLISFNTMVNA 199

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
            CK G V  AKA F  +       D  TY SLI G C  ++  +A ++F  M  +G   +
Sbjct: 200 HCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRN 259

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            V++  ++   C+  K+DEA  L   M + G  P+  TY  L+  FC +GK   A + F 
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   G + +  +Y +LI+ +CK  +++E + +   M+ KG+  +VV +N L  G  +  
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +E A+ + D M+ + V  ++RTY   I G C+   +  A+ L   +   K   ++  YN
Sbjct: 380 MMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYN 439

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI GLCK+  +  AW L   +     VP+  T+   I  LC  G++++A  +F  ++E 
Sbjct: 440 TLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK 499

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            A  +   +  LI G+ +  + S  + L  +M  +   P++   ++++D L K
Sbjct: 500 HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 193/415 (46%), Gaps = 33/415 (7%)

Query: 168 TYNTLINGLCRTG----------HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           ++NTLI  L  T           H + ALN F+ +   +G I  V      +Y  ++  L
Sbjct: 59  SFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTV-----HSYQPLLFIL 113

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            + GF+  A         EN+       NS+I     ++   EA+ +   +       SV
Sbjct: 114 VRNGFLRAA---------ENVR------NSMIKSCVSSH---EARFVLNLLTHHEFSLSV 155

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            ++N +   L +   +DE + L   M+  GV PN  ++NT+++  C +G +  A+  F  
Sbjct: 156 TSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCG 215

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +   G   D  +Y  LI GYCK  E+ +A  ++  M  +G     V+Y  L  G  E+ +
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ AL+LF +M+ DG   D  TYT  +   C+ G   EA++ F  +     E ++  Y  
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LID  CK G++    E+  ++    LV +VV +N +I G C  G M+ A  +   M+ N 
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
             P+  T++ LI GF R     +   LL+KM E K+ P+    + ++  L K  +
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARV 450


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 282/593 (47%), Gaps = 60/593 (10%)

Query: 9   RSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS 68
           R F  A A +S+   +   L  H  ++  R+   + ++       FD +LR H     +S
Sbjct: 114 RRFHDARALLSSLPPHAEPLFPHLAEVY-RDFTFSAVS-------FDLLLRAHADAGQLS 165

Query: 69  SFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFT 128
           S   +   + K           G  P+L + N L+N   + G   +  + +G++  +   
Sbjct: 166 SALNVFDGMGK----------VGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVL 215

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+  T   + K    + R+ +A     +++  G E N++ Y+ +++  C  G T  A  +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNS 247
            E +            PN VTY+ ++ G CK+G +++A+ +  +MK+  +I  D V Y  
Sbjct: 276 LESLQRKG------LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I+G C     ++A R+  EM D G+  ++  +N +++ LCK  +M+E  ++L  M   G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +RP+  +YNTL+DG+C  G + +A E+   M   G     ++YN L+ G+C    +++AL
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+  M+ +G+ P  ++ +TL  GLF+  + E AL L+ E    G+A +  T+ T I+GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH------- 480
           CK G + EA EL   ++ L+C  D   Y  L DG CK G+L  A  L   + H       
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 481 ----------------------------GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
                                         L PN+VTY  +I G C +G + +A +L+ +
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           M  N   P+V     L+  F +  +  + N +L K+    ++P  SI +I +D
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 237/491 (48%), Gaps = 32/491 (6%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL     TYN L+  FC +  +      +  +L+    PN  + ++L+ GL    +  +A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L+ +  A G   NVIT+NT+INGLC+ G    A  L + M        + C P+++TY
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE------LRCPPDSLTY 537

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T+ DG CK G +  A  L  +M+     P V  +NS I G   A  W++   +  EM  
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P++VT+  ++   CK   + EA  L   MV  G+ PN    + LM  F   GK++ 
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 331 AEELFGSMESM----GCK----------------------HDDVSYNILINGYCKNKEVE 364
           A  +   + ++    GC                         +V +N++I G CK+  + 
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A SL+  + +K   P   TY++L  G      ++ A  L D M   G+  +  TY + I
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GLCK+G +  AV LF  L+      +   YN LID  CK G+   A++L   +    + 
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P V+TY+I+I GLC  G M++A  L   M EN   P+ IT+  LIHG+I+     ++++L
Sbjct: 838 PTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 897

Query: 545 LHKMKEKKVMP 555
             +M  + ++P
Sbjct: 898 YDEMHIRGLLP 908



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 257/575 (44%), Gaps = 103/575 (17%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAES 145
           L   GL PN+ TY +L+  +CK GR+         +  +     +   +  +I G     
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R+ +A  +  +++  G   N+  YNT+INGLC+ G       + +EM +      V  +P
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VGMRP 392

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  +Y+T+IDG C+EG + KA  +   M    +    +TYN+L+ G C  +  ++A RL+
Sbjct: 393 DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452

Query: 266 IEMMDQGVQPS-----------------------------------VVTFNVIMDELCKN 290
             M+ +GV P+                                   V+TFN +++ LCK 
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK------ 344
            +M EA  LLD M +    P++ TY TL DG+C +G++  A  L   ME +G        
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572

Query: 345 -------------------HDD----------VSYNILINGYCKNKEVEEALSLYREMVS 375
                              H +          V+Y  LI G+CK   + EA +LY EMV+
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHA----LKLFD------------EMQRDGVAADTRT 419
            G+ P V   + L    ++  +V+ A     KL +            E+ +     DT  
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIA 692

Query: 420 ----------YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                     +   I GLCK+G I +A  LF +LR  +   D   Y+ LI G   SG + 
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+ L   +    L PN++TYN +I GLC  G++ +A +LF  ++    +P+ IT++ LI
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
             + +  + ++  +L  KM E+ + P     SI++
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILI 847



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 21/355 (5%)

Query: 65  PPVSSFNILLAS--LAKNKH----YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  FN  +    +AK  H      + ++A GL PNL TY  LI  +CK G +      
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  ++ +   PN    ++L+   + E ++ EA  +  KL      P        I+ +  
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS- 685

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                   ++ + +A+GN           V ++ II GLCK G +  AK+LF  ++++  
Sbjct: 686 --------HVVDTIADGNPHSA------NVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  TY+SLIHG   +   +EA  L   M+  G+ P+++T+N ++  LCK+ K+  A  
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + +  +G+ PN  TYNTL+D +C  GK   A +L   M   G +   ++Y+ILI G C
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLC 851

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
               +EEA+ L  +M+   + P  +TY TL  G  +   +E   KL+DEM   G+
Sbjct: 852 TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGL 906



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 141/306 (46%), Gaps = 14/306 (4%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLM-------------VQRGVRPNACTYNTLMD 320
           +PS+V+   ++  L + R+  +A  LL  +             V R    +A +++ L+ 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
                G+++ A  +F  M  +GC+    S N L+N   ++ +   A  +Y +M   G+ P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              T   +        +V  A++  +EM+  G+  +   Y   +D  C  G+  +A  + 
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH-GVLVPNVVTYNIMIQGLCN 499
            +L+      ++  Y  L+ G CK GR++ A  +   +   G +V + V Y +MI G C 
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G+MD A  +  +M +     ++  ++ +I+G  ++    +V ++L +M++  + PD   
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 560 VSIVVD 565
            + ++D
Sbjct: 397 YNTLID 402



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 114/223 (51%), Gaps = 1/223 (0%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           VS+++L+  +    ++  AL+++  M   G +P++ + N L   L +      A  ++ +
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+  GV  D  T        C++G + +AVE    +  +  E+++ AY+ ++D  C  G 
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA-AAPDVITFD 526
            + A  +  SL    L PNVVTY ++++G C DG+M++A  +  +M+E      D + + 
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M+I+G+ +         + ++M++  +  +  + + +++ L K
Sbjct: 329 MMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCK 371


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 224/427 (52%), Gaps = 11/427 (2%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +RL ++   PN++   +LI  F ++G V      + ++      P     N ++ GL  +
Sbjct: 117 SRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKK 171

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            R      ++  + A G  PNV+TY TLI+G CR G  + A  LF+EM      I     
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM------IEKKIF 225

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  V Y+ +I GLC E  + +A+++F  M++  + P++ TYN+++ G C      +A  L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           + EM+  G+ P+VVTF +++D LCK  +M  A + L  M   GV PN   YN L+DG+C 
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G ++ A  L   +E      D  +Y+ILI G C    +EEA  L +EM  KG  P  VT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNTL  G  +   +E A+++  +M   G+  +  T++T IDG CK G +  A+ L+  + 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           I     D+ AY  LIDG  K G  K A+ L   +    L PNV T + +I GLC DG++ 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 505 KARDLFL 511
            A  LFL
Sbjct: 526 DAIKLFL 532



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 143/420 (34%), Positives = 215/420 (51%), Gaps = 13/420 (3%)

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F    R+  S FTPN   F  LI        + EA  ++ K+      P +   N +++G
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDG 167

Query: 176 LCRTGHTMIALNLFEEMANGNGE-IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           L + G        F+ M    G+ +     PN VTY T+IDG C++G   KA  LF +M 
Sbjct: 168 LVKKGR-------FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           ++ I P VV Y  LI GLC  +  +EA+ +F  M + G+ P++ T+N +MD  CK   + 
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           +A  L   M+  G+ PN  T+  L+DG C   ++  A +    M S G   +   YN LI
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +GYCK   + EALSL+ E+    I P V TY+ L  GL  + ++E A  L  EM++ G  
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  TY T IDG CK G + +A+E+   +     E +I  ++ LIDG CK+G+++ A  L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           +  +    L+P+VV Y  +I G   DG   +A  L  +M+E    P+V T   LI G  +
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 214/431 (49%), Gaps = 11/431 (2%)

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY-----------STIIDGLCK 219
           ++ N L R   +    N+F  +     E+G+V +   V Y           + ++DGL K
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVK 170

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G  D    ++  M     +P+VVTY +LI G C   D+ +A RLF EM+++ + P+VV 
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + +++  LC   ++ EA  +   M   G+ PN  TYNT+MDG+C +  + +A EL+  M 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G   + V++ ILI+G CK  E+  A     +M S G+ P +  YN L  G  +   + 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL L  E+++  +  D  TY+  I GLC    + EA  L + ++      +   YN LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DG CK G ++ A E+   +    + PN++T++ +I G C  G+M+ A  L+ +M      
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PDV+ +  LI G  +     +   L  +M+E  + P+   +S ++D L K+     ++  
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 580 FLVQERQGEVG 590
           FL +      G
Sbjct: 531 FLAKTGTDTTG 541



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 30/292 (10%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLA--------SLAKNKHYDTRLNATGLFPNLYTY 99
           ++    F  +LR +PS   + SF+++ A        SL + K     +   G  P ++  
Sbjct: 612 SKVLLFFRILLRKNPSS--IDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQ 669

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
             LI+ +   G V+     F  I     + N  ++ S+I       R  +A  LF +++ 
Sbjct: 670 TSLISMYSATGNVADAHNMFDEIP----SKNLISWTSVISAYVDNQRPNKALQLFRQMQM 725

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
              +P+++T    ++     G    AL++ E +       G+    +    +++I+   K
Sbjct: 726 DDVQPDIVTVTVALSACADLG----ALDMGEWIHAYIRHRGL--DTDLCLNNSLINMYSK 779

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM-DQGVQPSVV 278
            G +  A+   L +      P+ VT+  ++    HA    E K+ F  M  D  ++P + 
Sbjct: 780 CGEIGTARRFSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRIS 833

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            F  ++D LC+   + EA    + +++  VRPNA  + TL+    L G  ++
Sbjct: 834 HFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLLGACSLQGMWDK 882



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 23/265 (8%)

Query: 129 PNAATFNSLIKGLHA---ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           P++    SL+  L A   +S ++E   +   +  FG EP +    +LI+    TG+   A
Sbjct: 626 PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADA 685

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
            N+F+E+ +           N ++++++I         +KA  LF QM+ +++ PD+VT 
Sbjct: 686 HNMFDEIPS----------KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTV 735

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
              +         +  + +   +  +G+   +   N +++   K  ++  A R       
Sbjct: 736 TVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF------ 789

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVE 364
             V PN  T+  ++      G +   ++ F SM E    +     +  +++  C+   + 
Sbjct: 790 SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLT 849

Query: 365 EALSLYREMVSKGIKPTVVTYNTLF 389
           EA   Y  ++   ++P  V + TL 
Sbjct: 850 EA---YEFILKMPVRPNAVVWRTLL 871



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 75/379 (19%), Positives = 144/379 (37%), Gaps = 49/379 (12%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   GL PN++T + LI+  CK GR+S     F  + ++      +  N L + L+    
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLYQMCS 556

Query: 147 IMEAAALF-------------TKLKAFGCEPNVITY--------NTLINGLCRTGHTMIA 185
           +  A +LF             TKL A   +P    +        N  +    ++ +T   
Sbjct: 557 L--ALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKV 614

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL----CKEGFVDKAKALFLQMKDENINPD 241
           L  F  +   N        P+++   +++  L     K   V+  K +   + +    P 
Sbjct: 615 LLFFRILLRKN--------PSSIDSFSLMFALKACTLKSSLVE-GKQMHALVINFGFEPI 665

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           +    SLI       +  +A  +F E+  +    +++++  ++     N++ ++A +L  
Sbjct: 666 IFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFR 721

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M    V+P+  T    +     +G ++  E +   +   G   D    N LIN Y K  
Sbjct: 722 QMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCG 781

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD-GVAADTRTY 420
           E+  A           + P  VT+  + +       VE   + F  M+ D  +      +
Sbjct: 782 EIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHF 835

Query: 421 TTFIDGLCKNGYIIEAVEL 439
              +D LC+ G + EA E 
Sbjct: 836 GCMVDLLCRAGLLTEAYEF 854



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 25/238 (10%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+ Y     V +A +++ E+ SK +    +++ ++     +  +   AL+LF +MQ D 
Sbjct: 672 LISMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKALQLFRQMQMDD 727

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  D  T T  +      G +     +   +R    + D+   N LI+   K G +  A 
Sbjct: 728 VQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR 787

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN-AAAPDVITFDMLIHG 531
                    +++PN VT+  ++    + G +++ +  F  M+E+ +  P +  F  ++  
Sbjct: 788 RF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDL 841

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-----------DLLVKNEISLKSLP 578
             R    ++  E + KM    V P+A +   ++            +LV+N+I  +  P
Sbjct: 842 LCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWDKKMLVRNQIKQRRDP 896



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 25/198 (12%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           PN+A  +F  M +M    P + +  + L++ A     D        +   GL  +L   N
Sbjct: 713 PNKALQLFRQM-QMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNN 771

Query: 101 ILINCFCKIGRVSLGFIAFGRILR-SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            LIN + K G +       G   R S   PN  TF  ++        + E    F  +K 
Sbjct: 772 SLINMYSKCGEI-------GTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKE 824

Query: 160 -FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
            +   P +  +  +++ LCR G    A     +M           +PN V + T++    
Sbjct: 825 DYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---------VRPNAVVWRTLLGACS 875

Query: 219 KEGFVDKAKALFLQMKDE 236
            +G  DK   +  Q+K  
Sbjct: 876 LQGMWDKKMLVRNQIKQR 893


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 282/593 (47%), Gaps = 60/593 (10%)

Query: 9   RSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS 68
           R F  A A +S+   +   L  H  ++  R+   + ++       FD +LR H     +S
Sbjct: 114 RRFHDARALLSSLPPHAEPLFPHLAEVY-RDFTFSAVS-------FDLLLRAHADAGQLS 165

Query: 69  SFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFT 128
           S   +   + K           G  P+L + N L+N   + G   +  + +G++  +   
Sbjct: 166 SALNVFDGMGK----------VGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVL 215

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+  T   + K    + R+ +A     +++  G E N++ Y+ +++  C  G T  A  +
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNS 247
            E +            PN VTY+ ++ G CK+G +++A+ +  +MK+  +I  D V Y  
Sbjct: 276 LESLQRKG------LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I+G C     ++A R+  EM D G+  ++  +N +++ LCK  +M+E  ++L  M   G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +RP+  +YNTL+DG+C  G + +A E+   M   G     ++YN L+ G+C    +++AL
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+  M+ +G+ P  ++ +TL  GLF+  + E AL L+ E    G+A +  T+ T I+GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH------- 480
           CK G + EA EL   ++ L+C  D   Y  L DG CK G+L  A  L   + H       
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 481 ----------------------------GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
                                         L PN+VTY  +I G C +G + +A +L+ +
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           M  N   P+V     L+  F +  +  + N +L K+    ++P  SI +I +D
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 259/566 (45%), Gaps = 71/566 (12%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAES 145
           L   GL PN+ TY +L+  +CK GR+         +  +     +   +  +I G     
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R+ +A  +  +++  G   N+  YNT+INGLC+ G       + +EM +      V  +P
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VGMRP 392

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  +Y+T+IDG C+EG + KA  +   M    +    +TYN+L+ G C  +  ++A RL+
Sbjct: 393 DKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW 452

Query: 266 IEMMDQGVQPS-----------------------------------VVTFNVIMDELCKN 290
             M+ +GV P+                                   V+TFN +++ LCK 
Sbjct: 453 FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKI 512

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            +M EA  LLD M +    P++ TY TL DG+C +G++  A  L   ME +G       +
Sbjct: 513 GRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N  I G+   K+  +   ++ EM ++G+ P +VTY  L  G  +   +  A  L+ EM  
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEA---------VELFRTLRILKCELDIQA------- 454
           +G+  +    +  +    K G + EA         +++     I   E+D  +       
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIA 692

Query: 455 ----------YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                     +N +I GLCKSGR+  A  LF SL +   +P+  TY+ +I G    G +D
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  L   M      P++IT++ LI+G  +  + S+   L +K++ K + P+    + ++
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812

Query: 565 DLLVKNEISLKSLPSFLVQERQGEVG 590
           D   K     K+  +F ++++  E G
Sbjct: 813 DEYCKEG---KTTEAFKLKQKMVEEG 835



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 243/508 (47%), Gaps = 50/508 (9%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+ Y+YN LI+ +C+ G +   F     ++R+       T+N+L+KG  +   I +A
Sbjct: 389 GMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDA 448

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVT 209
             L+  +   G  PN I+ +TL++GL + G T  ALNL++E +A G  +       N +T
Sbjct: 449 LRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAK-------NVIT 501

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++T+I+GLCK G + +A+ L  +MK+    PD +TY +L  G C       A  L  +M 
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  PSV  FN  +      ++  + + +   M  RG+ PN  TY  L+ G+C  G ++
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV------- 382
            A  L+  M + G   +    + L++ + K  +V+EA  + +++V+  + P         
Sbjct: 622 EACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI 681

Query: 383 -------------------VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                              V +N +  GL +  ++  A  LF+ ++      D  TY++ 
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I G   +G I EA  L   +       +I  YN LI GLCKSG+L  A  LF  L    +
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801

Query: 484 VPNVVTYNIMIQGLCNDGQ----------------MDKARDLFLDMEENAAAPDVITFDM 527
            PN +TYN +I   C +G+                M++A  L   M EN   P+ IT+  
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCT 861

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMP 555
           LIHG+I+     ++++L  +M  + ++P
Sbjct: 862 LIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 160/339 (47%), Gaps = 37/339 (10%)

Query: 65  PPVSSFNILLAS--LAKNKH----YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  FN  +    +AK  H      + ++A GL PNL TY  LI  +CK G +      
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  ++ +   PN    ++L+   + E ++ EA  +  KL      P        I+ +  
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS- 685

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                   ++ + +A+GN           V ++ II GLCK G +  AK+LF  ++++  
Sbjct: 686 --------HVVDTIADGNPHSA------NVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  TY+SLIHG   +   +EA  L   M+  G+ P+++T+N ++  LCK+ K+  A  
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV---------- 348
           L + +  +G+ PN  TYNTL+D +C  GK   A +L   M   G   + +          
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENN 851

Query: 349 ------SYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
                 +Y  LI+GY K+  +EE   LY EM  +G+ PT
Sbjct: 852 VDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 141/306 (46%), Gaps = 14/306 (4%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLM-------------VQRGVRPNACTYNTLMD 320
           +PS+V+   ++  L + R+  +A  LL  +             V R    +A +++ L+ 
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLR 156

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
                G+++ A  +F  M  +GC+    S N L+N   ++ +   A  +Y +M   G+ P
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLP 216

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              T   +        +V  A++  +EM+  G+  +   Y   +D  C  G+  +A  + 
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH-GVLVPNVVTYNIMIQGLCN 499
            +L+      ++  Y  L+ G CK GR++ A  +   +   G +V + V Y +MI G C 
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQ 336

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G+MD A  +  +M +     ++  ++ +I+G  ++    +V ++L +M++  + PD   
Sbjct: 337 RGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYS 396

Query: 560 VSIVVD 565
            + ++D
Sbjct: 397 YNTLID 402



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 114/223 (51%), Gaps = 1/223 (0%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           VS+++L+  +    ++  AL+++  M   G +P++ + N L   L +      A  ++ +
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+  GV  D  T        C++G + +AVE    +  +  E+++ AY+ ++D  C  G 
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA-AAPDVITFD 526
            + A  +  SL    L PNVVTY ++++G C DG+M++A  +  +M+E      D + + 
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M+I+G+ +         + ++M++  +  +  + + +++ L K
Sbjct: 329 MMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCK 371


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 213/379 (56%), Gaps = 15/379 (3%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V S N LL++L K   +         +    + PNL T+N +IN  CK+G+++       
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRI---MEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +    F PN  T+N+LI G     R+    +A A+  ++      PN +T+N LI+G C
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +  +   AL +FEEM +         KP  VTY+++++GLC EG +++AK L  +M   N
Sbjct: 315 KDENLSAALKVFEEMQSQG------LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P+V+TYN+LI+G C      EA+ LF  +  QG+ P+V+TFN ++   CK  KM+EA 
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L  +M+++G  PNA TYN L+ GFC  GK+   + L   M+  G K D V+YNILI+ +
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+ KE ++A  L  EM+ KG+KP+ +TYN L  G      +  AL L  +M+++G  A+ 
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548

Query: 418 RTYTTFIDGLCKNGYIIEA 436
            TY   I G C+ G + +A
Sbjct: 549 VTYNVLIQGYCRKGKLEDA 567



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 211/387 (54%), Gaps = 9/387 (2%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  ++R   +PN  TFN++I GL    ++ +A  +   +K +G  PNV+TYNTLI+G C
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYC 276

Query: 178 ---RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
              R G    A  + +EM            PN+VT++ +IDG CK+  +  A  +F +M+
Sbjct: 277 KMGRVGKMYKADAILKEMVENK------VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQ 330

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + + P VVTYNSL++GLC+    NEAK L  EM+   ++P+V+T+N +++  CK + ++
Sbjct: 331 SQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLE 390

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L D + ++G+ PN  T+NTL+ G+C  GK+  A  L   M   G   +  +YN LI
Sbjct: 391 EARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLI 450

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G+C+  ++EE  +L  EM  +G+K   VTYN L     E  + + A +L DEM   G+ 
Sbjct: 451 VGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLK 510

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
               TY   ++G C  G +  A+ L + +       ++  YN LI G C+ G+L+ A  L
Sbjct: 511 PSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGL 570

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDG 501
              +    L+PN  TY I+ + +   G
Sbjct: 571 LNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 228/440 (51%), Gaps = 9/440 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  N+   + L+      S+ +     F +   +  + +V++ N L++ L +        
Sbjct: 156 FCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVE 215

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +++EM      I     PN +T++T+I+GLCK G ++KA  +   MK     P+VVTYN
Sbjct: 216 FVYKEM------IRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYN 269

Query: 247 SLIHGLC---HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +LI G C         +A  +  EM++  V P+ VTFNV++D  CK+  +  A ++ + M
Sbjct: 270 TLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEM 329

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
             +G++P   TYN+L++G C  GK+N A+ L   M S   K + ++YN LINGYCK K +
Sbjct: 330 QSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLL 389

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           EEA  L+  +  +G+ P V+T+NTL  G  +  ++E A  L   M   G   +  TY   
Sbjct: 390 EEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCL 449

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I G C+ G + E   L   ++    + D   YN LI   C+    K A  L   +    L
Sbjct: 450 IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGL 509

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P+ +TYNI++ G C +G +  A +L   ME+     +V+T+++LI G+ R  +    N 
Sbjct: 510 KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANG 569

Query: 544 LLHKMKEKKVMPDASIVSIV 563
           LL++M EK ++P+ +   I+
Sbjct: 570 LLNEMLEKGLIPNRTTYEII 589



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 212/390 (54%), Gaps = 16/390 (4%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCF 106
           ++  M+R   SP  ++ FN ++  L K    NK  D    +   G +PN+ TYN LI+ +
Sbjct: 217 VYKEMIRRKISPNLIT-FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGY 275

Query: 107 CKIGRVSLGFIA---FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           CK+GRV   + A      ++ +  +PN+ TFN LI G   +  +  A  +F ++++ G +
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P V+TYN+L+NGLC  G    A  L +EM + N       KPN +TY+ +I+G CK+  +
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN------LKPNVITYNALINGYCKKKLL 389

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           ++A+ LF  +  + + P+V+T+N+L+HG C      EA  L   M+++G  P+  T+N +
Sbjct: 390 EEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCL 449

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C+  KM+E   LL+ M  RGV+ +  TYN L+  +C   +  +A  L   M   G 
Sbjct: 450 IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGL 509

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K   ++YNIL+NGYC    +  AL+L ++M  +G    VVTYN L  G     ++E A  
Sbjct: 510 KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANG 569

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           L +EM   G+  +  TY    + + + G++
Sbjct: 570 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 151/315 (47%), Gaps = 13/315 (4%)

Query: 267 EMMDQG-VQPSVVT--FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           ++M  G V P +V   FN    EL  N  ++   RLL+L+      P      +++D F 
Sbjct: 78  QLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKI---RSILDSF- 133

Query: 324 LMGKINRAEEL-FGSMESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           + G+ N +  L F S+     +   + +  ++L+  Y +N +    L  ++       K 
Sbjct: 134 VKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKL 193

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           +V++ N L   L + ++      ++ EM R  ++ +  T+ T I+GLCK G + +A ++ 
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV---LVPNVVTYNIMIQGL 497
             +++     ++  YN LIDG CK GR+   ++    L   V   + PN VT+N++I G 
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C D  +  A  +F +M+     P V+T++ L++G     + ++   LL +M    + P+ 
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 558 SIVSIVVDLLVKNEI 572
              + +++   K ++
Sbjct: 374 ITYNALINGYCKKKL 388


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 294/621 (47%), Gaps = 86/621 (13%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYN 100
           P++A  IF  M  +    P + S+N LL +L ++  +D            GL PNL TYN
Sbjct: 69  PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 128

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI   C+  +          +    F+P+  ++ +LI  L     + +A  LF ++   
Sbjct: 129 ILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 188

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+V  YN LI+G  + G  + A  ++E +  G         PN  +Y+ +I+GLCK 
Sbjct: 189 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS-----VYPNIPSYNVMINGLCKC 243

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP----- 275
           G  D++  ++ +MK      D+ TY++LIHGLC + + + A R++ EM + GV P     
Sbjct: 244 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 303

Query: 276 -----------------------------SVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
                                        +VV++N+++  L +N K+DEA  + +L+ ++
Sbjct: 304 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEK 363

Query: 307 GVRPNACTYNTLMDGFCLMGKINRA--------------------------------EEL 334
               ++ TY  L+ G C  G +N+A                                +E+
Sbjct: 364 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 423

Query: 335 FGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            G ++ M   GCK +    N +ING+ +  ++E+AL  +  MVSKG  PTVVTYNTL  G
Sbjct: 424 AGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 483

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  +   A  L  EM + G   +  TY+  ++GLC+   +  A+ L+        + D
Sbjct: 484 LSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 543

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           ++ +N +I GLC SG+++ A +L+  +     VPN+VT+N +++G       ++A  ++ 
Sbjct: 544 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWD 603

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            + +    PD+I++++ + G    +  S     L+   ++ V+P A    I  ++LV+  
Sbjct: 604 HILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA----ITWNILVQGY 659

Query: 572 ISLKSL--PSFLVQERQGEVG 590
           ++LK    P F+    +G  G
Sbjct: 660 LALKGYMEPVFVPASMKGNPG 680



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 236/485 (48%), Gaps = 39/485 (8%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA-LFTKL-KAFGCEPNVITYNTLINGL 176
           F  IL+  F P       L+   +A++ + + A  +F ++ + FGC+P + +YN+L+N L
Sbjct: 46  FHHILKRLFDPK------LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 99

Query: 177 CRTGHTMIALNLF---------EEMANGNGEIGVVCK--------------------PNT 207
             +     A + F           +   N  I + C+                    P+ 
Sbjct: 100 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDV 159

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +Y T+I+ L K G++  A  LF +M +  + PDV  YN LI G     D   A  ++  
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 219

Query: 268 MMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           ++    V P++ ++NV+++ LCK  K DE+  +   M +     +  TY+TL+ G C  G
Sbjct: 220 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 279

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A  ++  M   G   D V YN ++NGY +   +EE L L++ M  +G + TVV+YN
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYN 338

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GLFE  +V+ A+ +++ +      AD+ TY   + GLCKNGY+ +A+ +       
Sbjct: 339 ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENG 398

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           + +LD  AY+ +I+GLC+ GRL     +   +      PN    N +I G     +++ A
Sbjct: 399 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDA 458

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
              F +M      P V+T++ LI+G  +    S+   L+ +M +K   P+    S++++ 
Sbjct: 459 LRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNG 518

Query: 567 LVKNE 571
           L + +
Sbjct: 519 LCQGK 523


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 269/548 (49%), Gaps = 56/548 (10%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILIN--- 104
           FD M+R  PSP  V+ F+ L+    K    D   +        G+ P+L  Y+ILIN   
Sbjct: 263 FDMMVRSGPSPNLVT-FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 105 --------------------------------CFCKIGRVSLGFIAFGRILRSCFTPNAA 132
                                            + ++G +      + R+L+   +PN  
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T++ LI GL    R++EA  +F ++   G EP+V+TY++LI+G C++          E +
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS----------ENL 431

Query: 193 ANGNGEIGVVCK----PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            +G G  G++ +    P+ V  S +I+GL ++G +D+A   F Q     +  +   +N+L
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I G        +  +++I M    V P VVT+ V++  L +  ++DEA  L   ++++G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+   Y TL+DGFC         ++F  M+S G   D   YN+LIN + +   VE  L 
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLE 611

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L RE++  G++P +VTYNT+  G   +     A+KLF+ ++      +  T+T  ID  C
Sbjct: 612 LLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYC 671

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+G + +A+ +F ++     E +I  Y+CLIDG  K+   + A+EL+  +    + PN+V
Sbjct: 672 KDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV 731

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +Y+I+I GLC  G M++A   F         PDVI + +LI G+ ++   ++   L   M
Sbjct: 732 SYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHM 791

Query: 549 KEKKVMPD 556
               +MPD
Sbjct: 792 LVNGIMPD 799



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 240/480 (50%), Gaps = 6/480 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  PNL T++ LIN +CK  R+   F  +  ++     P+   ++ LI GL    ++ E
Sbjct: 269 SGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEE 328

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
             +LF+   A G + +V+ ++++++   R G    A+ ++  M            PN VT
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG------ISPNVVT 382

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I+GLC+ G V +A  +F Q+  + + P V+TY+SLI G C + +  +   L+  M+
Sbjct: 383 YSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIML 442

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P VV  +++++ L +   MDEA R     V+RG+  N   +N L+DG   + +  
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
              +++  M       D V+Y +L+ G  +   ++EAL+L+ +++ KG  P  + Y TL 
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +       L++F  MQ +G+  D   Y   I+   + G +   +EL R +     E
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DI  YN +I G C       A +LF  L  G   PN +T+ I+I   C DG+MD A  +
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  M E    P+++T+  LI G+ +        EL  KM   +V P+    SI++D L K
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/554 (24%), Positives = 267/554 (48%), Gaps = 21/554 (3%)

Query: 21  FRSNFSSLLVHFRDLTTREGDINVITPNEAFC-IFDYMLRMHPSPPPVSSFNILLASLAK 79
            RSN +S L  F      E  + +  P ++FC I   +LR     P    F+ ++     
Sbjct: 65  LRSNPTSALRFFE---WAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGN 121

Query: 80  NK---HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
            +    +       G  P+   Y+ L++C+C+ G V      F  + +   + +    + 
Sbjct: 122 LEVLGEFHGSFRNYGSNPST-VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASE 180

Query: 137 LIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           ++  L    RI      + ++ K  G       Y  + N   + G     LN    +   
Sbjct: 181 MLDLLIDSDRIDVILENYEEMCKGLG------VYEFVFNSFLKRGEVEKGLNFHRALV-- 232

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
             E G+V  P  V  + I+ GLC    +  A   F  M     +P++VT+++LI+  C  
Sbjct: 233 --ERGLV--PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
              +EA  L+  M+++G+ P +V ++++++ L +  K++E + L  + + RGV+ +   +
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           +++MD +  +G + +A E++  M   G   + V+Y+ILING C+N  V EA  ++ +++ 
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G++P+V+TY++L  G  +   +     L+  M R G   D    +  I+GL + G + E
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+  F         L+   +N LIDG  +  R +   +++  +    ++P+VVTY ++++
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVK 528

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           GL   G++D+A  LF  + +   +PD I +  LI GF +  +P+   ++   M+   + P
Sbjct: 529 GLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFP 588

Query: 556 DASIVSIVVDLLVK 569
           D  I ++++++  +
Sbjct: 589 DICIYNVLINMFFR 602



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 208/424 (49%), Gaps = 10/424 (2%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            FNS +K    E  +    AL  +    G  P ++  N ++ GLC      +A + F+ M
Sbjct: 211 VFNSFLKRGEVEKGLNFHRALVER----GLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN VT+ST+I+  CKE  +D+A +L+  M ++ I PD+V Y+ LI+GL
Sbjct: 267 VRSGPS------PNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGL 320

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A    E   LF   + +GV+  VV F+ IMD   +   + +A  +   M++ G+ PN 
Sbjct: 321 FRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNV 380

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY+ L++G C  G++  A  +FG +   G +   ++Y+ LI+G+CK++ + +   LY  
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGI 440

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+ KG  P VV  + L  GL     ++ AL+ F +  + G+  +   +   IDG  +   
Sbjct: 441 MLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKR 500

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             + ++++  + + K   D+  Y  L+ GL + GRL  A  LF  L      P+ + Y  
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G C          +F  M+ N   PD+  +++LI+ F R      V ELL ++ +  
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620

Query: 553 VMPD 556
           + PD
Sbjct: 621 LEPD 624



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 188/374 (50%), Gaps = 13/374 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           + F ++  MLR     P V   ++L+  L++    D  L         GL  N Y +N L
Sbjct: 433 DGFGLYGIMLR-KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+   ++ R   G   +  +      P+  T+  L+KGL  + R+ EA ALF +L   G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ I Y TLI+G C+       L +F+ M + NG       P+   Y+ +I+   +EG 
Sbjct: 552 SPDHIIYCTLIDGFCKKRDPATGLQIFKLMQS-NGIF-----PDICIYNVLINMFFREGC 605

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V+    L  ++    + PD+VTYN++I G C    +++A +LF  +     QP+ +TF +
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK+ +MD+A  +   M++RG  PN  TY+ L+DG+        A EL+  M    
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + VSY+ILI+G CK   +EEA   ++  + + + P V+ Y  L  G  ++ ++  A+
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 403 KLFDEMQRDGVAAD 416
            L+D M  +G+  D
Sbjct: 786 MLYDHMLVNGIMPD 799



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 12/298 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIG 110
           ++ M+   P V ++ +L+  LA+    D       +L   G  P+   Y  LI+ FCK  
Sbjct: 510 LMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKR 569

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
             + G   F  +  +   P+   +N LI     E  +     L  ++  +G EP+++TYN
Sbjct: 570 DPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYN 629

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           T+I G C       A+ LFE +  G        +PN +T++ +ID  CK+G +D A  +F
Sbjct: 630 TMICGYCSLKIFSKAIKLFEVLKCGR------TQPNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             M +    P+++TY+ LI G     +   A  L+ +M+   V P++V++++++D LCK 
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             M+EAS      + R + P+   Y  L+ G+C +G++  A  L+  M   G   DD+
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDL 801



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 172/366 (46%), Gaps = 25/366 (6%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-----------------GVQPSVVTFNVIM 284
           V ++  + H L     ++ A R+F  M+ Q                 G  PS V ++ ++
Sbjct: 89  VQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTV-YSFLL 147

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              C+N  +D A      M + GV  +    + ++D   L+   +R + +  + E M CK
Sbjct: 148 HCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLD---LLIDSDRIDVILENYEEM-CK 203

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              V Y  + N + K  EVE+ L+ +R +V +G+ P +V  N +  GL   +Q+  A   
Sbjct: 204 GLGV-YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDF 262

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           FD M R G + +  T++T I+  CK   + EA  L+  +       D+  Y+ LI+GL +
Sbjct: 263 FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFR 322

Query: 465 SGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +G+L+    LF  +L  GV + +VV ++ ++      G + KA +++  M +   +P+V+
Sbjct: 323 AGKLEEGNSLFSMALARGVKM-DVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           T+ +LI+G  R     +   +  ++ ++ + P     S ++D   K+E        + + 
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 584 ERQGEV 589
            R+G V
Sbjct: 442 LRKGHV 447



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  IF  ML   P P  + +++ L+    K ++ ++      ++    + PN+ +Y+I
Sbjct: 677 DDAMLIFSSMLERGPEPN-ILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  CK G +    +AF   +     P+   +  LI+G     R+ EA  L+  +   G
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 162 CEPN 165
             P+
Sbjct: 796 IMPD 799


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 253/516 (49%), Gaps = 16/516 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR--------LNATGLFPNLYTYN 100
           +A  + D M R   +P P     IL A+ ++      R        L+  G   ++   N
Sbjct: 133 DALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCN 192

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCF--TPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++N  C  G      +   R L + F   P+  ++N+++KGL    R      L  ++ 
Sbjct: 193 LVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV 252

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC PNV+T+NTLI  LCR G       +  +M +        C P+   Y+T++DG+C
Sbjct: 253 RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG------CTPDIRMYATVLDGVC 306

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           KEG ++ A  +  +M    + P+VV YN+++ GLC A  W +A+ L  EM D       V
Sbjct: 307 KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDV 366

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFN+++D  C+N  +     LL+ M++ G  P+  TY T+++GFC  G I+ A  L  SM
Sbjct: 367 TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            + GC+ + +SY I++ G C  +   +A  L  +M+ +G  P  VT+NT+   L +   V
Sbjct: 427 AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E A++L  +M  +G + D  +Y+T IDGL K G   EA+EL   +       +   Y+ +
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
              L K GR+    ++F ++    +  + V YN +I  LC  G  D+A +    M  +  
Sbjct: 547 ASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            P+  T+ +LI G        +  E+L ++  K  +
Sbjct: 607 MPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 236/511 (46%), Gaps = 46/511 (9%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILR----------------SCFTPNAATFNS- 136
           PN YTY  ++   C  GR++        + R                +C       F S 
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 137 --LIKGLHAES--------------------RIMEAAALFTKLK-AFGCEPNVITYNTLI 173
             +++ LH                        + EA  L   L  +FGC+P+V++YN ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
            GLC         +L EEM      + V C PN VT++T+I  LC+ G  ++   +  QM
Sbjct: 233 KGLCMAKRWGRVQDLMEEM------VRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM 286

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
            D    PD+  Y +++ G+C       A  +   M   G++P+VV +N ++  LC   + 
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           ++A  LL  M       +  T+N L+D FC  G + R  EL   M   GC  D ++Y  +
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING+CK   ++EA+ L + M + G +P  ++Y  +  GL    +   A  L  +M   G 
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGC 466

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           + +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +IDGL K+G+   A E
Sbjct: 467 SPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALE 526

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   + +  + PN + Y+ +   L  +G++++   +F ++++     D + ++ +I    
Sbjct: 527 LLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLC 586

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +     +  E L  M     MP+ S  +I++
Sbjct: 587 KRGGTDRAIEFLAYMVSSGCMPNESTYTILI 617



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 188/441 (42%), Gaps = 49/441 (11%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN +++G CR G    A  L            V   PN  TY  ++  LC  G +  A +
Sbjct: 86  YNAMVSGYCRAGQLASARRL---------AASVPVPPNAYTYFPVVRALCARGRIADALS 136

Query: 229 LFLQMKDENINP--------------------------------------DVVTYNSLIH 250
           +  +M+     P                                      DV   N +++
Sbjct: 137 VLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLN 196

Query: 251 GLC-HANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
            +C      +EA RL  ++    G  P VV++N ++  LC  ++      L++ MV+ G 
Sbjct: 197 AVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGC 256

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            PN  T+NTL+   C  G   R  ++   M   GC  D   Y  +++G CK   +E A  
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +   M S G+KP VV YNT+  GL    + E A +L  EM  +    D  T+   +D  C
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           +NG +   +EL   +    C  D+  Y  +I+G CK G +  A  L  S+      PN +
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +Y I+++GLC+  +   A DL   M E   +P+ +TF+ +I+   +     +  ELL +M
Sbjct: 437 SYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQM 496

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
                 PD    S V+D L K
Sbjct: 497 LLNGCSPDLISYSTVIDGLGK 517



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 169/373 (45%), Gaps = 20/373 (5%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ ++ G C+ G +  A+ L   +    + P+  TY  ++  LC      +A  +  EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 270 DQGVQPSVVTFNVIMDELCKNRK---MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +G  P    ++VI++  C          A R+L  +  RG   +    N +++  C  G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 327 -KINRAEELFGSME-SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             ++ A  L   +  S GC  D VSYN ++ G C  K       L  EMV  G  P VVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 385 YNTLFL-----GLFE-IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +NTL       GLFE +HQV        +M   G   D R Y T +DG+CK G++  A E
Sbjct: 263 FNTLIGYLCRNGLFERVHQV------LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +     + ++  YN ++ GLC + R + A EL   +       + VT+NI++   C
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G + +  +L   M E+   PDVIT+  +I+GF +     +   LL  M      P+  
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436

Query: 559 IVSIVVDLLVKNE 571
             +IV+  L   E
Sbjct: 437 SYTIVLKGLCSAE 449


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 257/511 (50%), Gaps = 13/511 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  F  L+ +LA+       L        + L P++  YN+ I+CF K G V +    F 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  ++ S+I  L    R+ EA  LF +++A    P    YNT+I G    G
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L E +          C P+ V++++I+  L K+  VD+A +LF  MK ++  P
Sbjct: 200 RFEDAYKLLERLRERG------CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 252

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  TYN +I  LC      EA R+  EM    + P+++T N+++D LCK RK++EA ++ 
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +   QRG  P+  TY +L+DG    G+++ A  LF  M   G   + V Y  LI  +  +
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 372

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+   +++E++ +G KP +   NT    +F+  +VE    +F++++  G   D R+Y
Sbjct: 373 GRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 432

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GL K G   E   +F  ++     LD +AYN ++DG CKSG++  A+E+   +  
Sbjct: 433 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 492

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P V TY  ++ GL    ++D+A  LF + +      +V+ +  LI GF ++    +
Sbjct: 493 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 552

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L +M +K + P+    + ++D LVK E
Sbjct: 553 AYLILEEMMKKGLTPNVYTWNSLLDALVKAE 583



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 259/531 (48%), Gaps = 13/531 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N+ +    K  + D        L A GL P+  +Y  +I   CK GR+      
Sbjct: 113 PDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL 172

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++      P A  +N++I G  +  R  +A  L  +L+  GC P+V+++N+++  L +
Sbjct: 173 FAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGK 232

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL+LFE M           +PN+ TY+ IID LC  G V++A  +  +M+  ++
Sbjct: 233 KRKVDEALSLFEVMKKD-------AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 285

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+++T N ++  LC A    EA ++F     +G  P  VT+  ++D L K  ++DEA R
Sbjct: 286 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 345

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M+  G   N   Y +L+  F + G+     ++F  +   GCK D    N  ++   
Sbjct: 346 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVF 405

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  EVE+   ++ ++ S G  P V +Y+ L  GL +  Q      +F  M++ G A D R
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   +DG CK+G + +A E+   ++    +  +  Y  ++DGL K  RL  A+ LF   
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 525

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  NVV Y+ +I G    G++D+A  +  +M +    P+V T++ L+   ++  E 
Sbjct: 526 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 585

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           ++       MKE K  P+    SI+++ L + +   K+   +   ++QG V
Sbjct: 586 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 237/484 (48%), Gaps = 11/484 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF-----PNLYTYNILINCFCKIGRV 112
           LR     P V SFN +L  L K +  D  L+   +      PN  TYNI+I+  C  GRV
Sbjct: 211 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRV 270

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
              +     +  +   PN  T N ++  L    ++ EA  +F      GC P+ +TY +L
Sbjct: 271 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 330

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+GL + G    A  LFE+M +           N V Y+++I      G  +    +F +
Sbjct: 331 IDGLGKKGQVDEAYRLFEKMLDAGH------NANPVVYTSLIRNFFIHGRKEDGHKVFKE 384

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +      PD+   N+ +  +  A +  + + +F ++   G  P V ++++++  L K  +
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             E S +   M Q+G   +A  YN ++DGFC  GK+++A E+   M+    +    +Y  
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +++G  K   ++EA  L+ E  SKGI+  VV Y++L  G  ++ +++ A  + +EM + G
Sbjct: 505 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +  T+ + +D L K   I EA+  F++++ +KC  +   Y+ LI+GLC+  +   A+
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             +  +    LVPNVVTY  MI GL   G +  A  LF   + N   PD  +F+ LI G 
Sbjct: 625 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 684

Query: 533 IRIN 536
              N
Sbjct: 685 SNAN 688



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 253/509 (49%), Gaps = 13/509 (2%)

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           S P   ++N ++        ++       RL   G  P++ ++N ++ C  K  +V    
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  +++    PN++T+N +I  L    R+ EA  +  +++     PN++T N +++ L
Sbjct: 241 SLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+      A  +FE  A+  G     C P+ VTY ++IDGL K+G VD+A  LF +M D 
Sbjct: 300 CKARKLEEAYKIFES-ASQRG-----CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 353

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             N + V Y SLI          +  ++F E++ +G +P +   N  MD + K  ++++ 
Sbjct: 354 GHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 413

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             + + +   G  P+  +Y+ L+ G    G+      +F +M+  G   D  +YN +++G
Sbjct: 414 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 473

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +CK+ +V +A  +  EM  K ++PTV TY  +  GL +I +++ A  LF+E +  G+  +
Sbjct: 474 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 533

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y++ IDG  K G I EA  +   +       ++  +N L+D L K+  +  A   F 
Sbjct: 534 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 593

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           S+      PN  TY+I+I GLC   + +KA   + DM++    P+V+T+  +I G  ++ 
Sbjct: 594 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 653

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +    L  + K    +PDA+  + +++
Sbjct: 654 NITDAYSLFERFKANGGIPDAASFNALIE 682



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 199/396 (50%), Gaps = 13/396 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA+ IF+   +   +P  V+ +  L+  L K    D       ++   G   N   Y  L
Sbjct: 307 EAYKIFESASQRGCNPDCVT-YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 365

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  F   GR   G   F  ++R    P+    N+ +  +     + +   +F  ++++G 
Sbjct: 366 IRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 425

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V +Y+ LI+GL + G      N+F  M      +      +   Y+ ++DG CK G 
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL------DARAYNAVVDGFCKSGK 479

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V KA  +  +MK++ + P V TY +++ GL   +  +EA  LF E   +G++ +VV ++ 
Sbjct: 480 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 539

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D   K  ++DEA  +L+ M+++G+ PN  T+N+L+D      +IN A   F SM+ M 
Sbjct: 540 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 599

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  +  +Y+ILING C+ ++  +A   +++M  +G+ P VVTY T+  GL ++  +  A 
Sbjct: 600 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 659

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            LF+  + +G   D  ++   I+G+      +EA +
Sbjct: 660 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 209/477 (43%), Gaps = 43/477 (9%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN A  + L   L    R+ +A      ++     P    Y  LI  L        AL L
Sbjct: 9   PNQACAD-LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M     E+GV        ++T++  L +EG V  A AL  ++K   + PD+V YN  
Sbjct: 68  LRQMQEVGYEVGVH------LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 121

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I     A + + A + F E+  QG++P  V++  ++  LCK  ++ EA  L   M     
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P A  YNT++ G+   G+   A +L   +   GC    VS+N ++    K ++V+EALS
Sbjct: 182 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 241

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L+ E++ K  +P   TYN +   L    +VE A ++ DEM+   +  +  T    +D LC
Sbjct: 242 LF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 300

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K   + EA ++F +     C  D   Y  LIDGL K G++  A+ LF  +       N V
Sbjct: 301 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 360

Query: 489 TY-----NIMIQGLCND------------------------------GQMDKARDLFLDM 513
            Y     N  I G   D                              G+++K R +F D+
Sbjct: 361 VYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 420

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                 PDV ++ +LIHG  +  +  + + + H MK++    DA   + VVD   K+
Sbjct: 421 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 477



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 97/215 (45%)

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +P    Y  L   L E  + E AL+L  +MQ  G       +TT +  L + G + +A+ 
Sbjct: 42  RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 101

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   ++    E DI  YN  ID   K+G +  A + F  L    L P+ V+Y  MI  LC
Sbjct: 102 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLC 161

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G++ +A +LF  ME   + P    ++ +I G+          +LL +++E+  +P   
Sbjct: 162 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 221

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESN 593
             + ++  L K     ++L  F V ++  E   S 
Sbjct: 222 SFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSST 256


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 226/416 (54%), Gaps = 6/416 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN LI+ F K  ++        R+    F P+  T+N +I    +  ++  A  +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F +L    CEP VITY  LI      G   +A+ L +EM +   E      P+T+TY+ I
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLE------PDTLTYNAI 249

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G+CKE  VDKA  L   +      PD++TYN L+  L     W+E ++L  EM+  G 
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P+VVT ++++  LC++ K++EA  LL  M ++G++P+A  Y+ L+ GFC  G+++ A E
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
               M S GC  D V+YN ++ G C+  + ++AL ++ ++   G  P V +YNTLF  L+
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                  AL++  ++   G+  D  TY + I  LC++G + EA+EL   ++  +   ++ 
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           +YN ++ GLCK  R   A E+  ++      PN  TY ++I+G+   G   +A +L
Sbjct: 490 SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 242/464 (52%), Gaps = 7/464 (1%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N  C+ G+ +        ++   +TP+      LIKG      I +A  +   L+ +G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+V  YN LI+G  +      A  + + M +     G +  P+ VTY+ +I   C  G
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSR----GFL--PDVVTYNIMIGSFCSRG 187

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  +F ++  +N  P V+TY  LI         + A +L  EM+ +G++P  +T+N
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+  +CK   +D+A  LL  +  RG +P+  TYN L+      GK +  E+L   M S+
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GCK + V+++ILI   C++ +VEEA++L R M  KG+KP    Y+ L  G     +++ A
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +  + M  DG   D   Y T + GLC+ G   +A+E+F  L  + C  ++ +YN L   
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L  SG    A E+   L +  + P+ +TYN +I  LC DG +D+A +L +DM+     P+
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           V+++++++ G  ++N  +   E+L  M EK   P+ +   ++++
Sbjct: 488 VVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 209/411 (50%), Gaps = 6/411 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL     P+   +N+LI G    +++  A  +  ++K+ G  P+V+TYN +I   C  G 
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +AL +FEE+   N      C+P  +TY+ +I+    +G +D A  L  +M  + + PD
Sbjct: 189 LDLALEIFEELLKDN------CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            +TYN++I G+C     ++A  L   +  +G +P ++T+N+++  L    K  E  +L+ 
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M+  G +PN  T++ L+   C  GK+  A  L  SM+  G K D   Y+ LI G+C+  
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A      M+S G  P +V YNT+  GL    + + AL++F+++   G   +  +Y 
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T    L  +G    A+E+   L     + D   YN LI  LC+ G +  A EL   +  G
Sbjct: 423 TLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
              PNVV+YNI++ GLC   + + A ++   M E    P+  T+ +LI G 
Sbjct: 483 RYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 202/420 (48%), Gaps = 47/420 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L++   K    +       R+ + G  P++ TYNI+I  FC  G++ L    
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 119 FGRILR-SC----------------------------------FTPNAATFNSLIKGLHA 143
           F  +L+ +C                                    P+  T+N++I+G+  
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E  + +A  L   L + GC+P++ITYN L+  L   G       L  EM      I + C
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM------ISIGC 309

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           KPN VT+S +I  LC++G V++A  L   MK++ + PD   Y+ LI G C     + A  
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
               M+  G  P +V +N IM  LC+  K D+A  + + + + G  PN  +YNTL     
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G   RA E+   + + G   D+++YN LI+  C++  V+EA+ L  +M S   +P VV
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +YN + LGL ++++   A+++   M   G   +  TY   I+G+  +G   EA+EL  +L
Sbjct: 490 SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 195/399 (48%), Gaps = 7/399 (1%)

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+N  CR G    +L   E M +          P+ +  + +I G      + KA  + +
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKG------YTPDVILCTKLIKGFFNSRNIGKATRV-M 127

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           ++ +    PDV  YN+LI G   AN    A R+   M  +G  P VVT+N+++   C   
Sbjct: 128 EILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRG 187

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+D A  + + +++    P   TY  L++   L G I+ A +L   M S G + D ++YN
Sbjct: 188 KLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYN 247

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I G CK   V++A  L R + S+G KP ++TYN L   L    +     KL  EM   
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  T++  I  LC++G + EAV L R+++    + D   Y+ LI G C+ GRL  A
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            E    +     +P++V YN ++ GLC  G+ D+A ++F  ++E    P+V +++ L   
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                +  +  E++ K+  + + PD    + ++  L ++
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRD 466



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 183/370 (49%), Gaps = 1/370 (0%)

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+ G  +++      M D+   PDV+    LI G  ++ +  +A R+ +E++++  +P V
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRV-MEILERYGKPDV 138

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             +N ++    K  +++ A+R+LD M  RG  P+  TYN ++  FC  GK++ A E+F  
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +    C+   ++Y ILI     +  ++ A+ L  EM+SKG++P  +TYN +  G+ +   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V+ A +L   +   G   D  TY   +  L   G   E  +L   +  + C+ ++  ++ 
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LC+ G+++ A  L  S+    L P+   Y+ +I G C +G++D A +    M  + 
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             PD++ ++ ++ G  R  +  +  E+  K+ E    P+ S  + +   L  +    ++L
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438

Query: 578 PSFLVQERQG 587
              L    QG
Sbjct: 439 EMILKLLNQG 448



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 13/295 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++NILL +L     +       + + + G  PN+ T++ILI   C+ G+V      
Sbjct: 276 PDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNL 335

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+A  ++ LI G   E R+  A      + + GC P+++ YNT++ GLCR
Sbjct: 336 LRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR 395

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           TG    AL +FE++     E+G  C PN  +Y+T+   L   G   +A  + L++ ++ I
Sbjct: 396 TGKADQALEVFEKL----DEVG--CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGI 449

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD +TYNSLI  LC     +EA  L ++M     +P+VV++N+I+  LCK  + ++A  
Sbjct: 450 DPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIE 509

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           +L  M ++G +PN  TY  L++G    G    A EL  S+  M    +D S+N L
Sbjct: 510 VLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISED-SFNRL 563



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 64  PPPVSSFNILLASL-AKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP VSS+N L ++L +    Y       +L   G+ P+  TYN LI+C C+ G V     
Sbjct: 415 PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +    + PN  ++N ++ GL   +R  +A  +   +   GC+PN  TY  LI G+ 
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIG 534

Query: 178 RTGHTMIALNLFEEMANGNG 197
            +G    A+ L   +   N 
Sbjct: 535 FSGLRAEAMELANSLHGMNA 554


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 225/439 (51%), Gaps = 6/439 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           ++N L++ L    R       +  +   GC PN  TY  L+  LC+      A ++F  M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           A         C PN  +YS +I GLC+   VD+A  L  +M D    P+VVTY SL+ GL
Sbjct: 79  AAQG------CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  LF  M+ +G  P  V +NV++D   K   M EA RL + M+++G  P  
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN+L+ GF   G+  R + LF  M   GC  +  ++N L++G+CK  ++ EA  L+ E
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M S G  P VV+YNTL  G+    +   A +L  EM R GV  D  +Y   IDG  K+G 
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A++LF  +     E D  +Y+ +ID LC++G++  A+ +F  +      P+      
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           ++ GLC   ++ ++ +LF  M +    P +  +++L++   +      V E+ H++ E+ 
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 553 VMPDASIVSIVVDLLVKNE 571
             PD  I  ++++ L +++
Sbjct: 433 FSPDVEISKVILETLRRSD 451



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/436 (33%), Positives = 223/436 (51%), Gaps = 14/436 (3%)

Query: 69  SFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           S+N LL  LAK+         Y+  L A G  PN YTY  L+   C+  R       F  
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGA-GCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     +PN  +++ LI GL    ++ EAA L  ++   G +PNV+TY +L++GLC+ G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A++LF  M          C P+ V Y+ +IDG  K+G + +A  LF +M ++   P 
Sbjct: 138 LKEAVDLFSRMVYRG------CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V TYNSL+ G     ++   + LF +M+ QG  P++ TFN ++D  CK   M EA RL  
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G  P+  +YNTLM G C  GK + A+ L   M   G   D VSYNILI+GY K+ 
Sbjct: 252 EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A+ L+ E+   G++P   +Y+T+   L    +V  A  +F +M  +G A D     
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVI 371

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             + GLC+   + E+ ELF+ +   +C   I  YN L+  LCK+ R     E+F  L   
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431

Query: 482 VLVPNVVTYNIMIQGL 497
              P+V    ++++ L
Sbjct: 432 GFSPDVEISKVILETL 447



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 193/366 (52%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
            T++Y+ +++ L K G  D     +  M      P+  TY  L+  LC A  + EA+ +F
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M  QG  P+V ++++++  LC+ +K+DEA+ LL+ M+  G +PN  TY +L+ G C M
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK+  A +LF  M   GC  D V YN+LI+G+ K  ++ EA  L+ EM+ KG  PTV TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N+L  G     +      LF +M R G   +  T+   +DG CK G ++EA  LF  +R 
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           L C  D+ +YN L+ G+C  G+   A  L   +    + P++V+YNI+I G    G +D 
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  LF ++ ++   PD  ++  +I    R  +      +   M      PDA++V  +V 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 566 LLVKNE 571
            L + E
Sbjct: 376 GLCRGE 381



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 172/342 (50%), Gaps = 2/342 (0%)

Query: 230 FLQMKDENI--NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           F Q     +  N   ++YN L+  L  +   +     + +M+  G  P+  T+  ++  L
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSL 62

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C+ ++ +EA  +   M  +G  PN  +Y+ L+ G C   K++ A EL   M   G + + 
Sbjct: 63  CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y  L++G CK  +++EA+ L+  MV +G  P  V YN L  G  +   +  A +LF+E
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G      TY + + G  + G       LF+ +    C  +I  +N L+DG CK G 
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A  LF  +      P+VV+YN +++G+C+ G+  +A+ L  +M  +   PD++++++
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           LI G+ +        +L +++ +  + PDA   S ++D L +
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCR 344



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 15/306 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYN 100
            EA  +F  M+     PP    +N+L+   +K        + ++  L   G  P ++TYN
Sbjct: 139 KEAVDLFSRMV-YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE-KGCIPTVFTYN 196

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            L++ F + G        F  +LR    PN  TFN+L+ G      ++EA  LF ++++ 
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           GC P+V++YNTL+ G+C  G    A  L  EM      +G    P+ V+Y+ +IDG  K 
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG--VG----PDIVSYNILIDGYSKS 310

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +D A  LF ++    + PD  +Y+++I  LC A     A  +F +M+  G  P     
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVV 370

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++  LC+  ++ E+  L   MV+    P    YN LM   C   + +   E+F  +  
Sbjct: 371 IPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430

Query: 341 MGCKHD 346
            G   D
Sbjct: 431 RGFSPD 436



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 27/279 (9%)

Query: 4   ESCCNRSFSFASAPISAF--RSNFSSLLVHFRDLTTREGDINVITPN---EAFCIFDYML 58
           + C    F++ S  +S F  +  F  +   F+D+  +    N+ T N   + FC    M+
Sbjct: 186 KGCIPTVFTYNSL-LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 59  RMH---------PSPPPVSSFNILLASL-AKNKHYDTR-----LNATGLFPNLYTYNILI 103
             H           PP V S+N L+  + +K K ++ +     +  +G+ P++ +YNILI
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + + K G +      F  I +S   P+A +++++I  L    ++  A  +F  + A G  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+      L+ GLCR      +  LF+ M      +   C P    Y+ ++  LCK    
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAM------VKFECVPLIPEYNLLMYKLCKAKRS 418

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           D    +F ++ +   +PDV     ++  L  ++D   A+
Sbjct: 419 DDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 217/444 (48%), Gaps = 12/444 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN  +Y  L+   C+ G++         + R    P+  T+N +I  L    RI  A   
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +     EP+V+TYNTL+ GLC+ G    A +LF  M       G    P+ VTY+T+
Sbjct: 68  FETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSME------GAGITPSDVTYTTL 117

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ID  CK    + A  L   M     +P V +Y S+I+GLC     ++A +LF EM   G 
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P  VT+N ++  LC  +++ EA  LL +MV+   +P+  T+  L++G C   +I  A  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           LF  M   GC  D V++ +L++  C  +++  ALS+ R          V+ Y  +F  L 
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELG 295

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                + A +L  +M R GVA +  TYT F  GL      + A   FR +     E D+ 
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           AYN L+DG CK+ RL  A ++   +    L PN+VTYN ++   C  G+++   +L   M
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 415

Query: 514 EENAAAPDVITFDMLIHGFIRINE 537
                 PDV T+  L+ G  R+ +
Sbjct: 416 VSRGRQPDVATWSTLVAGLFRVGQ 439



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 216/448 (48%), Gaps = 18/448 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+  L+ +L +    D   +         L P+++TYN++I+  CK  R+S     
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P+  T+N+L+ GL    R+ +A +LF  ++  G  P+ +TY TLI+  C+
Sbjct: 68  FETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  L + MA+        C P   +Y +II+GLCK   VD+A  LF +MK    
Sbjct: 124 MCQFETAYGLLQLMASRK------CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD VTYN+LIHGLC     +EAK L   M++   QP  +TF  +++ LC   ++ EA  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M ++G  P+  T+  L+   C+  K+  A  +  +  +  C    + Y  +     
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPA--CPEAVILYTPIFRELG 295

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + +  + A  L ++M  +G+ P VVTY   F GL +  +   A + F  M   G+  D  
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   +DG CK   +  A ++ R +       +I  YN L+   C+ G+++   EL  ++
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 415

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
                 P+V T++ ++ GL   GQ+D A
Sbjct: 416 VSRGRQPDVATWSTLVAGLFRVGQVDAA 443



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 205/441 (46%), Gaps = 43/441 (9%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C+PN ++Y  L+  LCRTG    A +   EMA           P+  TY+ +ID LCK  
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK------LVPDVFTYNVVIDTLCKAR 59

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A   F  M +    PDVVTYN+L+ GLC      +A  LF  M   G+ PS VT+ 
Sbjct: 60  RISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYT 115

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  CK  + + A  LL LM  R   P   +Y ++++G C   K+++A +LF  M+  
Sbjct: 116 TLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA 175

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GCK D V+YN LI+G C  + + EA  L   MV    +P  +T+  L  GL    +++ A
Sbjct: 176 GCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEA 235

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI-------------IEAVELF-------- 440
             LF  M + G A D  T+T  +  LC    +              EAV L+        
Sbjct: 236 FVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELG 295

Query: 441 ------RTLRILK------CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
                 R  R+L+         ++  Y     GL        A+  F  +    + P++V
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            YN+++ G C   ++D A  +   M+++   P+++T++ L+    R  +   + ELLH M
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 415

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
             +   PD +  S +V  L +
Sbjct: 416 VSRGRQPDVATWSTLVAGLFR 436



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 188/418 (44%), Gaps = 76/418 (18%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN--ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           P V ++N+++ +L K +     +    T   P++ TYN L+   CK GRV+     FG +
Sbjct: 43  PDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSM 102

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
             +  TP+  T+ +LI       +   A  L   + +  C P V +Y ++INGLC+    
Sbjct: 103 EGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKV 162

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  LFEEM          CKP+ VTY+T+I GLC +  + +AK L   M + +  PD 
Sbjct: 163 DQAYQLFEEMKLAG------CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDK 216

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM--------- 293
           +T+ +LI GLC  +   EA  LF  M  QG  P +VT  V++ +LC  RK+         
Sbjct: 217 ITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRN 276

Query: 294 ------------------------DEASRLLDLMVQRGVRPNACTY-------------- 315
                                   D A+RLL  M +RGV PN  TY              
Sbjct: 277 YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGM 336

Query: 316 ---------------------NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
                                N L+DGFC   +++ AE++   M+  G   + V+YN L+
Sbjct: 337 RAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLV 396

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
             +C+  +VE    L   MVS+G +P V T++TL  GLF + QV+ A    +     G
Sbjct: 397 GHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 172/368 (46%), Gaps = 37/368 (10%)

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            ++  P+ ++Y  L+  LC     ++A     EM  + + P V T+NV++D LCK R++ 
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A    + M +    P+  TYNTL+ G C  G++ +A  LFGSME  G    DV+Y  LI
Sbjct: 63  RAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 118

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           + +CK  + E A  L + M S+   PTV +Y ++  GL +  +V+ A +LF+EM+  G  
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY T I GLC    + EA +L   +     + D   +  LI+GLC + R+K A+ L
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVL 238

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQM------------------------------- 503
           F  +      P++VT+ +++  LC   ++                               
Sbjct: 239 FQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRR 298

Query: 504 --DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
             D+A  L   M     AP+V+T+     G     E  +      +M E+ + PD    +
Sbjct: 299 GFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYN 358

Query: 562 IVVDLLVK 569
           ++VD   K
Sbjct: 359 VLVDGFCK 366



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 151/294 (51%), Gaps = 9/294 (3%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           +  Q  +P+ +++  ++  LC+  K+D+A   +  M +  + P+  TYN ++D  C   +
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I+RA E F +M     + D V+YN L+ G CKN  V +A SL+  M   GI P+ VTY T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L     ++ Q E A  L   M     +    +Y + I+GLCKN  + +A +LF  +++  
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ D   YN LI GLC   RL  A +L   +      P+ +T+  +I+GLC   ++ +A 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 508 DLFLDMEENAAAPDVITFDMLIHGF-IRINEPSKVNELLHKMKEKKVMPDASIV 560
            LF  M +   APD++T  +L+    IR     K+   L  ++     P+A I+
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIR----RKLRPALSVVRNYPACPEAVIL 286



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 4/248 (1%)

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           S  CK + +SY  L+   C+  ++++A S   EM  + + P V TYN +   L +  ++ 
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A++ F+ M       D  TY T + GLCKNG + +A  LF ++           Y  LI
Sbjct: 63  RAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 118

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           D  CK  + + A+ L   +      P V +Y  +I GLC + ++D+A  LF +M+     
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           PD +T++ LIHG        +  +LL  M E    PD    + +++ L   +   ++   
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVL 238

Query: 580 FLVQERQG 587
           F    +QG
Sbjct: 239 FQGMAKQG 246


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 248/499 (49%), Gaps = 22/499 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  S+++ ++  L      D        + +  + P+++TY ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R    PN  T+ +LI       ++  A  LF  + + GC PNV+TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 179 TGHTMIALNLFEEMANGNGEI-----------GVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +G    A  ++  M  GN +I           G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L   M  E   P+ + Y++LI G C     +EA+ +F +M ++G  P+V T++ ++D L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K++++D A ++L  M++    PN   Y  ++DG C +GK + A  L   ME  GC  + 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y  +I+G+ K  +V++ L L R+M +KG  P  VTY  L         ++ A +L DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M++         Y   I+G   N   I ++ L   +        I AY  LID  CK+GR
Sbjct: 837 MKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGR 894

Query: 468 LKFAWELFCSLPH--GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           L+ A EL   +         +   Y+ +I+ L    ++DKA +L+ DM +    P++  F
Sbjct: 895 LELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 526 DMLIHGFIRINEPSKVNEL 544
             L+ G IRIN   +  +L
Sbjct: 955 FYLVKGLIRINRWEEALQL 973



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 237/502 (47%), Gaps = 26/502 (5%)

Query: 85  TRLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           +R+ ++   PN+ TY IL+ C C    ++GR     I    I   C+ P+   FNSLI  
Sbjct: 323 SRMRSSSCIPNVVTYRILL-CGCLRKRQLGRCKR--ILSMMITEGCY-PSRRIFNSLIHA 378

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-I 199
                    A  L  K+   GC+P  + YN LI G+C     + +L++ E      GE +
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEML 437

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                 N V  S +   LC  G  +KA ++  +M  +   PD  TY+ +I  LC+A+  +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  LF EM    V P V T+ +++D  CK   + +A +  D MV+ G  PN  TY  L+
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-- 377
             +    K++ A ELF  M S GC  + V+Y  LI+G+CK+ ++E+A  +Y  M      
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 378 --------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                           P + TY  L  GL + H+V+ A  L D M  +G   +   Y   
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG CK G + EA  +F  +       ++  Y+ LID L K  RL  A ++   +     
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PNV+ Y  MI GLC  G+ D+A  L   MEE    P+V+T+  +I GF +  +  K  E
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLE 797

Query: 544 LLHKMKEKKVMPDASIVSIVVD 565
           L+ +M  K   P+     ++++
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLIN 819



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 246/526 (46%), Gaps = 36/526 (6%)

Query: 55  DYMLRMHPSP--PPVSSFNILLA------SLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D++ RM  S   P V ++ ILL        L + K   + +   G +P+   +N LI+ +
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG----- 161
           C+ G  S  +    ++      P    +N LI G+    ++     L    KA+G     
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 162 -CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
               N +  + L   LC  G    A ++  EM +  G I     P+T TYS +I  LC  
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS-KGFI-----PDTSTYSKVIGLLCNA 493

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             VD A  LF +MK  ++ PDV TY  LI   C      +A++ F EM+  G  P+VVT+
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++    K RKM  A+ L ++M+  G  PN  TY  L+DG C  G+I +A +++  M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 341 --------MGCKHDD--------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                   M  K DD         +Y  L++G CK  +V+EA  L   M  +G +P  + 
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  G  ++ +++ A  +F +M   G   +  TY++ ID L K+  +  A+++   + 
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  +IDGLCK G+   A+ L   +      PNVVTY  MI G    G++D
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           K  +L   M     AP+ +T+ +LI+           ++LL +MK+
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 243/543 (44%), Gaps = 40/543 (7%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
            N+L+    +N  ++       RL   G  P+  TYN L+  F +  R+   ++    + 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
            S F  +  T    +  L    R  EA AL  K + F  + + + Y  +I+GLC      
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK-EEF--KLDTVIYTQMISGLCEASLFE 316

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A++    M + +      C PN VTY  ++ G  ++  + + K +   M  E   P   
Sbjct: 317 EAMDFLSRMRSSS------CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM------DEAS 297
            +NSLIH  C + D++ A +L  +M D G QP  V +N+++  +C N K+      + A 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +    M+   V  N    + L    C  GK  +A  +   M S G   D  +Y+ +I   
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   +V+ A  L+ EM S  + P V TY  L     ++  ++ A K FDEM RDG A + 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYT  I    K   +  A ELF  +    C  ++  Y  LIDG CKSG+++ A +++  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 478 LPHGVLVP----------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +     +P                N+ TY  ++ GLC   ++ +ARDL   M      P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN---EISLKSLP 578
            I +D LI GF ++ +  +   +  KM E+   P+    S ++D L K+   +++LK L 
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730

Query: 579 SFL 581
             L
Sbjct: 731 RML 733



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 149/369 (40%), Gaps = 48/369 (13%)

Query: 244 TYNSLIHGL-CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR----KMDEASR 298
            Y++L+  L C  ND    ++   E+ D+  +      NV++ + C+N      ++E  R
Sbjct: 164 VYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGR 222

Query: 299 LLDLMVQRGVRPNACTYNTL--------------------------MDGFC------LMG 326
           L DL    G +P+  TYN L                          MDG+       L+ 
Sbjct: 223 LKDL----GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLC 278

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K  R  E    +E    K D V Y  +I+G C+    EEA+     M S    P VVTY 
Sbjct: 279 KAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G     Q+    ++   M  +G     R + + I   C++G    A +L + +   
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 447 KCELDIQAYNCLIDGLCKSGR------LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
            C+     YN LI G+C + +      L+ A + +  +    +V N V  + + + LC  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G+ +KA  +  +M      PD  T+  +I      ++      L  +MK   V+PD    
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 561 SIVVDLLVK 569
           +I++D   K
Sbjct: 519 TILIDSFCK 527



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 11/248 (4%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N+LI   C+N     AL     +   G KP+ +TYN L     E  +++ A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D  T   F+  LCK G   EA+ L         +LD   Y  +I GLC++   + 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +    +     +PNVVTY I++ G     Q+ + + +   M      P    F+ LIH
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF----LVQERQ 586
            + R  + S   +LL KM +    P   + +I++  +  NE     LPS     L ++  
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE----KLPSLDVLELAEKAY 433

Query: 587 GEVGESNV 594
           GE+ +++V
Sbjct: 434 GEMLDAHV 441


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 249/499 (49%), Gaps = 22/499 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  S+++ ++  L      D        + +  + P+++TY ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R    PN  T+ +LI       ++  A  LF  + + GC PNV+TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 179 TGHTMIALNLFEEMANGNGEI-----------GVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +G    A  ++  M  GN +I           G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L   M  E   P+ + Y++LI G C     +EA+ +F +M ++G  P+V T++ ++D L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K++++D A ++L  M++    PN   Y  ++DG C +GK + A  L   ME  GC  + 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y  +I+G+ K  +V++ L L R+M +KG  P  VTY  L         ++ A +L DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M++         Y   I+G  +  +II    L      +   + I AY  LID  CK+GR
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNRE-FIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGR 894

Query: 468 LKFAWELFCSLPH--GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           L+ A EL   +         +   Y+ +I+ L    ++DKA +L+ DM +    P++  F
Sbjct: 895 LELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 526 DMLIHGFIRINEPSKVNEL 544
             L+ G IRIN   +  +L
Sbjct: 955 FYLVKGLIRINRWEEALQL 973



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 237/502 (47%), Gaps = 26/502 (5%)

Query: 85  TRLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           +R+ ++   PN+ TY IL+ C C    ++GR     I    I   C+ P+   FNSLI  
Sbjct: 323 SRMRSSSCIPNVVTYRILL-CGCLRKRQLGRCKR--ILSMMITEGCY-PSRRIFNSLIHA 378

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-I 199
                    A  L  K+   GC+P  + YN LI G+C     + +L++ E      GE +
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEML 437

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                 N V  S +   LC  G  +KA ++  +M  +   PD  TY+ +I  LC+A+  +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  LF EM    V P V T+ +++D  CK   + +A +  D MV+ G  PN  TY  L+
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-- 377
             +    K++ A ELF  M S GC  + V+Y  LI+G+CK+ ++E+A  +Y  M      
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 378 --------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                           P + TY  L  GL + H+V+ A  L D M  +G   +   Y   
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG CK G + EA  +F  +       ++  Y+ LID L K  RL  A ++   +     
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PNV+ Y  MI GLC  G+ D+A  L   MEE    P+V+T+  +I GF +  +  K  E
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLE 797

Query: 544 LLHKMKEKKVMPDASIVSIVVD 565
           L+ +M  K   P+     ++++
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLIN 819



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 246/526 (46%), Gaps = 36/526 (6%)

Query: 55  DYMLRMHPSP--PPVSSFNILLA------SLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D++ RM  S   P V ++ ILL        L + K   + +   G +P+   +N LI+ +
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG----- 161
           C+ G  S  +    ++      P    +N LI G+    ++     L    KA+G     
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 162 -CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
               N +  + L   LC  G    A ++  EM +  G I     P+T TYS +I  LC  
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS-KGFI-----PDTSTYSKVIGLLCNA 493

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             VD A  LF +MK  ++ PDV TY  LI   C      +A++ F EM+  G  P+VVT+
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++    K RKM  A+ L ++M+  G  PN  TY  L+DG C  G+I +A +++  M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 341 --------MGCKHDD--------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                   M  K DD         +Y  L++G CK  +V+EA  L   M  +G +P  + 
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  G  ++ +++ A  +F +M   G   +  TY++ ID L K+  +  A+++   + 
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  +IDGLCK G+   A+ L   +      PNVVTY  MI G    G++D
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           K  +L   M     AP+ +T+ +LI+           ++LL +MK+
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 242/543 (44%), Gaps = 40/543 (7%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
            N+L+    +N  ++       RL   G  P+  TYN L+  F +  R+   ++    + 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
            S F  +  T    +  L    R  EA AL  K +    + + + Y  +I+GLC      
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFE 316

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A++    M + +      C PN VTY  ++ G  ++  + + K +   M  E   P   
Sbjct: 317 EAMDFLSRMRSSS------CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM------DEAS 297
            +NSLIH  C + D++ A +L  +M D G QP  V +N+++  +C N K+      + A 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +    M+   V  N    + L    C  GK  +A  +   M S G   D  +Y+ +I   
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   +V+ A  L+ EM S  + P V TY  L     ++  ++ A K FDEM RDG A + 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYT  I    K   +  A ELF  +    C  ++  Y  LIDG CKSG+++ A +++  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 478 LPHGVLVP----------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +     +P                N+ TY  ++ GLC   ++ +ARDL   M      P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN---EISLKSLP 578
            I +D LI GF ++ +  +   +  KM E+   P+    S ++D L K+   +++LK L 
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730

Query: 579 SFL 581
             L
Sbjct: 731 RML 733



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 149/369 (40%), Gaps = 48/369 (13%)

Query: 244 TYNSLIHGL-CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR----KMDEASR 298
            Y++L+  L C  ND    ++   E+ D+  +      NV++ + C+N      ++E  R
Sbjct: 164 VYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGR 222

Query: 299 LLDLMVQRGVRPNACTYNTL--------------------------MDGFC------LMG 326
           L DL    G +P+  TYN L                          MDG+       L+ 
Sbjct: 223 LKDL----GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLC 278

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K  R  E    +E    K D V Y  +I+G C+    EEA+     M S    P VVTY 
Sbjct: 279 KAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G     Q+    ++   M  +G     R + + I   C++G    A +L + +   
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 447 KCELDIQAYNCLIDGLCKSGR------LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
            C+     YN LI G+C + +      L+ A + +  +    +V N V  + + + LC  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G+ +KA  +  +M      PD  T+  +I      ++      L  +MK   V+PD    
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 561 SIVVDLLVK 569
           +I++D   K
Sbjct: 519 TILIDSFCK 527



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 11/248 (4%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N+LI   C+N     AL     +   G KP+ +TYN L     E  +++ A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D  T   F+  LCK G   EA+ L         +LD   Y  +I GLC++   + 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +    +     +PNVVTY I++ G     Q+ + + +   M      P    F+ LIH
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF----LVQERQ 586
            + R  + S   +LL KM +    P   + +I++  +  NE     LPS     L ++  
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE----KLPSLDVLELAEKAY 433

Query: 587 GEVGESNV 594
           GE+ +++V
Sbjct: 434 GEMLDAHV 441


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 253/496 (51%), Gaps = 17/496 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYN 100
           + A  + D M R    P  V  +N LL    K        + +D  +   G  PNL TYN
Sbjct: 210 DHALDLLDEMPRSRVQPD-VVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ++++  CK GR       + R++ +   P+  T+  LI GL     +  AA +++++   
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT 328

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   +   YN+L+ G C+ G    A   ++         G     N  TY+ +I GL   
Sbjct: 329 GLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA-------GFAGLRNLRTYNIMIKGLFDS 381

Query: 221 GFVDKAKALF-LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           G VD+A  L+ L  KD    PD VT+ +LIHGLC     N+A  +F E    G Q  V +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           ++ +++ LC   ++ +A ++ + M + G +PN+  YN L+ GFC + + + A  ++  M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             GC    ++YN LI+G CK ++ +EA S+ REMV  G  P + TY +L  GLF   +++
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCL 458
            AL ++ ++   G+  D   +   I GLC  G + EA+ +F  ++  K C  ++  YN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +DGL ++G +  A  L+ S+    L P++++YN  I+GLC+  ++ +   L  ++     
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 519 APDVITFDMLIHGFIR 534
            P VIT+++L+   I+
Sbjct: 682 IPTVITWNILVRAVIK 697



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 260/529 (49%), Gaps = 29/529 (5%)

Query: 44  VITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------- 93
            I P+ A   F  +  +    P + S N LL +  + + +    +A   F          
Sbjct: 96  AIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFS---DADAFFASLSHGAFGR 152

Query: 94  ---PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
              PNL TYNI++   C  G +      F  + R    P+  T+++L+ GL  + R+  A
Sbjct: 153 RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHA 212

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++     +P+V+ YN L+ G  + G     + +++++    G      +PN  TY
Sbjct: 213 LDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG-----ARPNLATY 267

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++DGLCK G   +   ++ +M   N+ PDV+TY  LIHGLC + D + A R++ E++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+      +N ++   C+  ++ EA +  D     G+R N  TYN ++ G    G ++ 
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 331 AEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           A EL+  +E  + C  D V++  LI+G C+N    +A +++ E    G +  V +Y+++ 
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL  + ++  A+K++++M +DG   ++  Y   I G C+     +AV ++  +    C 
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  YN LIDGLCK+ + + A  +   +      P++ TY  +I+GL +D ++D A  +
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH---KMKEKKVMP 555
           +  +       DV+  ++LIHG        KV+E LH    MKEKK  P
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLC---SAGKVDEALHVFSDMKEKKNCP 612



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 242/458 (52%), Gaps = 13/458 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           ++D +++   + P ++++N++L  L K   +        R+ A  L P++ TY ILI+  
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+ G V      +  I+++    +AA +NSL+KG     R+ EA   F     F    N+
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNL 368

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            TYN +I GL  +G    A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +KA
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKA 423

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +F + +      DV +Y+S+I+GLC+     +A +++ +M   G +P+   +N ++  
Sbjct: 424 FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            C+  +  +A R+   M   G  P   TYNTL+DG C   K   A  +   M   G   D
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             +Y  LI G   +K++++ALS++++++ KG+K  V+ +N L  GL    +V+ AL +F 
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603

Query: 407 EM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           +M ++     +  TY T +DGL + GYI +A  L+ ++     E DI +YN  I GLC  
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSC 663

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            R+    +L   +    ++P V+T+NI+++ +   G +
Sbjct: 664 DRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 225/434 (51%), Gaps = 13/434 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLK--AFG--CEPNVITYNTLINGLCRTGHTMI 184
           P   + N+L+       R  +A A F  L   AFG    PN+ TYN ++  LC  G    
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ LF+ +            P+ +TYST++ GL K+  +D A  L  +M    + PDVV 
Sbjct: 177 AVTLFDSLRRRQ------VAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVC 230

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           YN+L+ G   A ++ +  R++ +++ D G +P++ T+NV++D LCK  +  E   + + M
Sbjct: 231 YNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM 290

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V   ++P+  TY  L+ G C  G ++ A  ++  +   G   D   YN L+ G+C+   V
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTT 422
           +EA   +      G++  + TYN +  GLF+   V+ A++L+D +++D     DT T+ T
Sbjct: 351 QEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I GLC+NG+  +A  +F   R+   +LD+ +Y+ +I+GLC  GRL  A +++  +    
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             PN   YN +I G C   +   A  ++  M +N  +P VIT++ LI G  +  +  + +
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 543 ELLHKMKEKKVMPD 556
            +  +M E    PD
Sbjct: 530 SVAREMVENGFTPD 543



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 261/548 (47%), Gaps = 49/548 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++NI+L SL      D        L    + P+  TY+ L+    K  R+      
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDL 215

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLC 177
              + RS   P+   +N+L+ G        +   ++ KL K  G  PN+ TYN +++GLC
Sbjct: 216 LDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLC 275

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G       ++E M   N       +P+ +TY  +I GLC+ G VD A  ++ ++    
Sbjct: 276 KFGRFKEVGEVWERMVANN------LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIE-----------------------MMDQGVQ 274
           +  D   YNSL+ G C A    EA + +                         M+D+ ++
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE 389

Query: 275 ------------PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
                       P  VTF  ++  LC+N   ++A  + +     G + +  +Y+++++G 
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C +G++  A +++  M+  GCK +   YN LI+G+C+     +A+ +Y +M   G  PTV
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TYNTL  GL +  + + A  +  EM  +G   D  TY + I GL  +  I +A+ +++ 
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQ 569

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDG 501
           +     ++D+  +N LI GLC +G++  A  +F  +       PN+VTYN ++ GL   G
Sbjct: 570 ILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETG 629

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +DKA  L+  + E+   PD+I+++  I G    +   +  +LL ++  + ++P     +
Sbjct: 630 YIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689

Query: 562 IVVDLLVK 569
           I+V  ++K
Sbjct: 690 ILVRAVIK 697



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 221/437 (50%), Gaps = 9/437 (2%)

Query: 141 LHAESR-IMEAAAL--FTKLKA-FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L A SR IM  AAL  F  L +  GC P + ++N L++   R      A   F  +++G 
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG- 148

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
              G    PN  TY+ ++  LC  G +D+A  LF  ++   + PD +TY++L+ GL   +
Sbjct: 149 -AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR-GVRPNACTY 315
             + A  L  EM    VQP VV +N ++    K  + ++  R+ D +V+  G RPN  TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N ++DG C  G+     E++  M +   + D ++Y ILI+G C++ +V+ A  +Y E++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G+      YN+L  G  +  +V+ A K +D     G+  + RTY   I GL  +G + E
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 436 AVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           A+EL+  L + + C  D   +  LI GLC++G    A+ +F          +V +Y+ MI
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLCN G++  A  ++  M+++   P+   ++ LI GF ++   S    +  KM +    
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 555 PDASIVSIVVDLLVKNE 571
           P     + ++D L K E
Sbjct: 507 PTVITYNTLIDGLCKAE 523



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 149/318 (46%), Gaps = 36/318 (11%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EA  ++D + +     P   +F  L+  L +N   +           +G   ++++Y+ 
Sbjct: 385 DEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +IN  C +GR+      + ++ +    PN+  +N+LI G     R  +A  +++K+   G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC------------------ 203
           C P VITYNTLI+GLC+      A ++  EM        +                    
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564

Query: 204 -----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLIHG 251
                      K + + ++ +I GLC  G VD+A  +F  MK++ N  P++VTYN+L+ G
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           L      ++A  L+  + + G++P ++++N  +  LC   ++ E  +LLD ++ RG+ P 
Sbjct: 625 LYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPT 684

Query: 312 ACTYNTLMDGFCLMGKIN 329
             T+N L+      G I 
Sbjct: 685 VITWNILVRAVIKYGPIQ 702


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 273/538 (50%), Gaps = 18/538 (3%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLA--------SLAKNKHYDTRLNATGLFPNLYT 98
           P+ A  +F  M+R+   P  ++   +L+         S+A  +     +   G+  ++ T
Sbjct: 147 PHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKT 206

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +N+L+N +C  G++        R++      P+  T+N+++K +  + R+ +   L   +
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDM 266

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K  G  PN +TYN L+ G C+ G    A  + E M   N        P+  TY+ +I+G+
Sbjct: 267 KRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN------ILPDLCTYNILINGV 320

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G + +   L   MK   + PDVVTYN+LI G        EAK+L  +M + GV+P+ 
Sbjct: 321 CNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQ 380

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQ-RGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VT N+ +  LCK  K +E +R +  +V+  G  P+  TY+TL+  +  +G ++ A E+  
Sbjct: 381 VTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   G K + ++ N +++  CK ++V+EA +L      +G     VTY TL +G F   
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREE 500

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +VE A +++DEM+R  +     T+ + I GLC +G    A+E F  L       D   +N
Sbjct: 501 KVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFN 560

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +I G CK GR++ A+E +         P+  T NI++ GLC +G  +KA + F  +   
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITE 620

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKNEIS 573
               D +T++ +I  F +  +  +  +LL +M+EK++ PD  +  SI+  L+   ++S
Sbjct: 621 REV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLS 677



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 251/498 (50%), Gaps = 35/498 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNIL 102
           +A  + + M+      P   ++N +L +++K       K     +   GL PN  TYN L
Sbjct: 222 DALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNL 281

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +  +CK+G +   F     + ++   P+  T+N LI G+     I E   L   +K+   
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKL 341

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           +P+V+TYNTLI+G    G ++ A  L E+M N     GV  KPN VT++  +  LCKE  
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEAKKLMEQMEND----GV--KPNQVTHNISLKWLCKE-- 393

Query: 223 VDKAKALFLQMKD----ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            +K + +  ++K+       +PD+VTY++LI       D + A  +  EM  +G++ + +
Sbjct: 394 -EKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N I+D LCK RK+DEA  LLD   +RG   +  TY TL+ G+    K+ +A E++  M
Sbjct: 453 TLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEM 512

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           + +       ++N LI G C + + E A+  + E+   G+ P   T+N++ LG  +  +V
Sbjct: 513 KRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRV 572

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E A + ++E  +     D  T    ++GLCK G   +A+  F TL I + E+D   YN +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-ITEREVDTVTYNTM 631

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA------------ 506
           I   CK  +LK A++L   +    L P+  TYN +I  L  DG++ +A            
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFG 691

Query: 507 ---RDLFLDMEENAAAPD 521
              R+L L+ E+N A  +
Sbjct: 692 SMKRNLHLETEKNPATSE 709



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 278/555 (50%), Gaps = 36/555 (6%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTR---------------LNATGLFPNLYT-------- 98
           PS  P+   +++ + L+ +K  D +               L  + L PNL+         
Sbjct: 74  PSDSPLPLLSVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKAL 133

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL---HAESRIMEAAALFT 155
           ++I ++ +   G+  +    F +++R    PN  T N+L+ GL    +   I  A  +F 
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
            +   G   +V T+N L+NG C  G    AL + E M +   E  V   P+ VTY+TI+ 
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVS---EFNV--NPDNVTYNTILK 248

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQ 274
            + K+G +   K L L MK   + P+ VTYN+L++G C      EA ++ +E+M Q  + 
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELMKQTNIL 307

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P + T+N++++ +C    + E   L+D+M    ++P+  TYNTL+DG   +G    A++L
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKL 367

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYNTLFLGLF 393
              ME+ G K + V++NI +   CK ++ EE     +E+V   G  P +VTY+TL     
Sbjct: 368 MEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYL 427

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           ++  +  AL++  EM + G+  +T T  T +D LCK   + EA  L  +       +D  
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEV 487

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  LI G  +  +++ A+E++  +    + P V T+N +I GLC+ G+ + A + F ++
Sbjct: 488 TYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDEL 547

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
            E+   PD  TF+ +I G+ +     K  E  ++  +    PD    +I+++ L K  ++
Sbjct: 548 AESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607

Query: 574 LKSLPSF--LVQERQ 586
            K+L  F  L+ ER+
Sbjct: 608 EKALNFFNTLITERE 622



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 88/230 (38%), Gaps = 58/230 (25%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF ++D M R+  +P  V++FN L+  L  +   +        L  +GL P+  T+N +
Sbjct: 504 KAFEMWDEMKRIKITPT-VTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSI 562

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPN-------------------------------- 130
           I  +CK GRV   F  +   ++  F P+                                
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITERE 622

Query: 131 --AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA--- 185
               T+N++I     + ++ EA  L ++++    EP+  TYN++I  L   G    A   
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADEL 682

Query: 186 --------------LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
                         L+L  E      E     K   + YS +I+ LC  G
Sbjct: 683 LKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRG 732


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 246/522 (47%), Gaps = 43/522 (8%)

Query: 78  AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
           AK    + R    GL  N  TYN+LI   C+ G V   F     +      P+  T+ +L
Sbjct: 241 AKKVLVEMRERGCGL--NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 298

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           I GL    R  EA AL  ++     +PNV+ Y  LI+G  R G+   A  + +EM     
Sbjct: 299 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM----- 353

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
            +    +PN +TY  ++ GLCK G +D+A  L  QM  ++  PD +TYN +I G    + 
Sbjct: 354 -VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             +A RL  EM + G+ P+V T+++++  LC++ + ++AS LL+ M  +G++PNA  Y  
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 472

Query: 318 LMDGFCLMG--------------------------------KINRAEE---LFGSMESMG 342
           L+ G+C  G                                K+ R EE    F  M+  G
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              ++ +Y+ LI+GY KN ++E A  L + M+  G+KP  V Y  L    F+   +E   
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
             F  M   GV  D R Y   I  L  +G +  A  +   +       D+  Y+ LI GL
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK+   + A+ +   +    + PN+V YN +I GLC  G +  AR++F  +      P+ 
Sbjct: 653 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +T+  LI G  ++ + S    L ++M    + PDA + S++ 
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLT 754



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 245/526 (46%), Gaps = 51/526 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ PN  TY+ L+   CK+G++    +   +++R    P+  T+N +I+G        
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  L ++++  G  PNV TY+ +I+GLC++G    A +L EEM           KPN  
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAF 468

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+ +I G C+EG V  A  +F +M   N+ PD+  YNSLI GL       E+ + F +M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            ++G+ P+  T++ ++    KN  ++ A +L+  M+  G++PN   Y  L++ +     I
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 329 NRAEELFGSMESMGCKHDDVSYNILIN--------------------------------- 355
            +    F SM   G   D+  Y ILI+                                 
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 356 --GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
             G CK  + E+A  +  EM  KG+ P +V YN L  GL +   + +A  +F+ +   G+
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 708

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW- 472
             +  TYT+ IDG CK G I  A  L+  +       D   Y+ L  G   +G L+ A  
Sbjct: 709 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 768

Query: 473 ---ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
              E+F    H     ++ ++N ++ G C  G+M +   L   +      P+ +T + +I
Sbjct: 769 LIEEMFLR-GHA----SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 823

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDAS-IVSIVVDLLVKNEISL 574
            G     + S+V+ +  ++++K     A    S+ +D++ + +I L
Sbjct: 824 SGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 869



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 188/358 (52%), Gaps = 3/358 (0%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           + + ++  CK    D AK + ++M++     + VTYN LI GLC +    EA     +M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D G+ P   T+  +++ LCK+R+ +EA  LLD M    ++PN   Y  L+DGF   G  +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A ++   M + G + + ++Y+ L+ G CK  +++ A  L ++MV    +P  +TYN + 
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G F  H  + A +L  EM+  G++ +  TY+  I GLC++G   +A +L   +     +
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +   Y  LI G C+ G +  A E+F  +    ++P++  YN +I GL   G+++++   
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           F  M+E    P+  T+  LIHG+++  +     +L+ +M +  + P+     I +DLL
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND---VIYIDLL 579



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 231/545 (42%), Gaps = 101/545 (18%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGL 92
           EG     +  +AF +   M     SP  V +++I++  L ++   +        +   GL
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPN-VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PN + Y  LI+ +C+ G VSL    F ++ +    P+   +NSLI GL    R+ E+  
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            F +++  G  PN  TY+ LI+G  + G    A  L + M +         KPN V Y  
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG------LKPNDVIYID 577

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENIN--------------------------------- 239
           +++   K   ++K  + F  M D+ +                                  
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637

Query: 240 --PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDV  Y+SLI GLC   D  +A  +  EM  +GV P++V +N ++D LCK+  +  A 
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV--------- 348
            + + ++ +G+ PN  TY +L+DG C +G I+ A  L+  M + G   D           
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757

Query: 349 -------------------------SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                                    S+N L++G+CK  +++E L L   ++ +G+ P  +
Sbjct: 758 SSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT-FIDGL--------------- 427
           T   +  GL E  ++     +F E+Q+    +  R +++ F+D +               
Sbjct: 818 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIR 877

Query: 428 --CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLV 484
             CK G + +A+ L   +      +   +Y  ++D LC+ G+L  A  L   +   G L 
Sbjct: 878 DHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQ 937

Query: 485 PNVVT 489
           P +V 
Sbjct: 938 PTLVA 942


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 259/511 (50%), Gaps = 13/511 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  F  L+   A+    D  L+      +     +L  YN+ I+CF K+G+V + +  F 
Sbjct: 237 VHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFH 296

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  TF S+I  L    R+ EA  LF +L +    P V  YNT+I G    G
Sbjct: 297 ELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVG 356

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A +L E            C P+ + Y+ I+  L ++G V++A  +   MK  +  P
Sbjct: 357 KFNEAYSLLERQKRKG------CIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAP 409

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++ +YN LI  LC A +   A ++   M + G+ P+++T N+++D LCK +++DEA  + 
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             +  +   P++ T+ +L+DG    GK+N A  L+  M   G   + V Y  LI  + K 
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKC 529

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+   +Y+EM+ +G  P ++  N     +F+  ++E    LF+E++  G+  D R+Y
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GL K G+  +  +LF  ++     LD +AYN +IDG CKSG++  A++L   +  
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT 649

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P VVTY  +I GL    ++D+A  LF + +  A   +V+ +  LI GF ++    +
Sbjct: 650 KGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDE 709

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L ++ +K + P+    + ++D LVK E
Sbjct: 710 AYLILEELMQKGLTPNTYTWNCLLDALVKAE 740



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 268/529 (50%), Gaps = 20/529 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILL---ASLAK-NKHYD--TRLNATGLFPNLYTYNI 101
           +EA  +F+  L  + S P V ++N ++    S+ K N+ Y    R    G  P++  YN 
Sbjct: 324 DEAVELFEE-LDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNC 382

Query: 102 LINCFCKIGRVSLGFIAFGRILRSC---FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           ++ C  + G+V        RIL +      PN  ++N LI  L     +  A  +   +K
Sbjct: 383 ILTCLGRKGKVEEAL----RILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMK 438

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  PN+IT N +I+ LC+      A ++F  + +       VC P++VT+ ++IDGL 
Sbjct: 439 EAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHK------VCTPDSVTFCSLIDGLG 492

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           + G V+ A  L+ +M D    P+ V Y SLI          +  +++ EMM +G  P ++
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
             N  MD + K  ++++   L + +  +G+ P+  +Y+ L+ G    G      +LF  M
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +  G   D  +YNI+I+G+CK+ +V +A  L  EM +KG++PTVVTY ++  GL +I ++
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  LF+E +   V  +   Y++ IDG  K G I EA  +   L       +   +NCL
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +D L K+  +  A   F ++ +    PN VTY+IM+ GLC   + +KA   + +M++   
Sbjct: 733 LDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGL 792

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            P+ IT+  +I G  R+    +  +L  + K    +PD++  + +++ L
Sbjct: 793 KPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGL 841



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 261/529 (49%), Gaps = 12/529 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-----ATGLFPNLYTYNIL 102
           NEA+ + +   R     P V ++N +L  L +    +  L           PNL +YNIL
Sbjct: 359 NEAYSLLERQKR-KGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNIL 417

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK G +         +  +   PN  T N +I  L    R+ EA ++F  L    C
Sbjct: 418 IDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ +T+ +LI+GL R G    A  L+E+M + +G+      PN V Y+++I    K G 
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLD-SGQT-----PNAVVYTSLIRNFFKCGR 531

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            +    ++ +M     +PD++  N+ +  +  A +  + + LF E+  QG+ P V ++++
Sbjct: 532 KEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSI 591

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  L K     +  +L   M ++G+  +   YN ++DGFC  GK+N+A +L   M++ G
Sbjct: 592 LIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            +   V+Y  +I+G  K   ++EA  L+ E  SK +   VV Y++L  G  ++ +++ A 
Sbjct: 652 LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAY 711

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            + +E+ + G+  +T T+   +D L K   I EA+  F+ ++ LKC  +   Y+ +++GL
Sbjct: 712 LILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGL 771

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK  +   A+  +  +    L PN +TY  MI GL   G + +A+DLF   + +   PD 
Sbjct: 772 CKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDS 831

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             ++ +I G    N+      L  + + K     +    +++D L K +
Sbjct: 832 ACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKAD 880



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 245/501 (48%), Gaps = 7/501 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L + GL P+  T+  +I   CK  RV      F  +  +   P    +N++I G  +  +
Sbjct: 298 LKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGK 357

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA +L  + K  GC P+VI YN ++  L R G    AL + E M        +   PN
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-------MDAAPN 410

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             +Y+ +ID LCK G ++ A  +   MK+  + P+++T N +I  LC A   +EA  +F+
Sbjct: 411 LTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFL 470

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +  +   P  VTF  ++D L ++ K+++A  L + M+  G  PNA  Y +L+  F   G
Sbjct: 471 GLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCG 530

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +     +++  M   GC  D +  N  ++   K  E+E+  +L+ E+ ++G+ P V +Y+
Sbjct: 531 RKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYS 590

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GL +    +   KLF EM+  G+  DTR Y   IDG CK+G + +A +L   ++  
Sbjct: 591 ILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTK 650

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +  +  Y  +IDGL K  RL  A+ LF       +  NVV Y+ +I G    G++D+A
Sbjct: 651 GLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEA 710

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +  ++ +    P+  T++ L+   ++  E  +       MK  K  P+    SI+V+ 
Sbjct: 711 YLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNG 770

Query: 567 LVKNEISLKSLPSFLVQERQG 587
           L K     K+   +   ++QG
Sbjct: 771 LCKVRKFNKAFVFWQEMQKQG 791



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 227/485 (46%), Gaps = 82/485 (16%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKI------- 109
           + P ++S+NIL+  L K    +  L         GLFPN+ T NI+I+  CK        
Sbjct: 407 AAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466

Query: 110 ----------------------------GRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
                                       G+V+  ++ + ++L S  TPNA  + SLI+  
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526

Query: 142 HAESR-----------------------------------IMEAAALFTKLKAFGCEPNV 166
               R                                   I +  ALF ++KA G  P+V
Sbjct: 527 FKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDV 586

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            +Y+ LI+GL + G +     LF EM      +      +T  Y+ +IDG CK G V+KA
Sbjct: 587 RSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHL------DTRAYNIVIDGFCKSGKVNKA 640

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L  +MK + + P VVTY S+I GL   +  +EA  LF E   + V  +VV ++ ++D 
Sbjct: 641 YQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDG 700

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K  ++DEA  +L+ ++Q+G+ PN  T+N L+D      +I+ A   F +M+++ C  +
Sbjct: 701 FGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPN 760

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           +V+Y+I++NG CK ++  +A   ++EM  +G+KP  +TY T+  GL  +  V  A  LF+
Sbjct: 761 EVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFE 820

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
             +  G   D+  Y   I+GL      ++A  LF   R+  C +  +    L+D L K+ 
Sbjct: 821 RFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKAD 880

Query: 467 RLKFA 471
            L+ A
Sbjct: 881 CLEQA 885



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 187/402 (46%), Gaps = 11/402 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-----TRLNATGLFPNLYTYNIL 102
           N+A+ +++ ML    +P  V   +++       +  D       +   G  P+L   N  
Sbjct: 498 NDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNY 557

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++C  K G +  G   F  I     TP+  +++ LI GL       +   LF ++K  G 
Sbjct: 558 MDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGL 617

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             +   YN +I+G C++G    A  L EEM           +P  VTY ++IDGL K   
Sbjct: 618 HLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG------LQPTVVTYGSVIDGLAKIDR 671

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A  LF + K + ++ +VV Y+SLI G       +EA  +  E+M +G+ P+  T+N 
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D L K  ++DEA      M      PN  TY+ +++G C + K N+A   +  M+  G
Sbjct: 732 LLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG 791

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K + ++Y  +I+G  +   V EA  L+    S G  P    YN +  GL   ++   A 
Sbjct: 792 LKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAY 851

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            LF+E +  G    ++T    +D L K   + +A  +   LR
Sbjct: 852 ILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLR 893



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 188/398 (47%), Gaps = 9/398 (2%)

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            YN L+  + RT +      + EEM+  G G       P+  T   ++    K   + +A
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFG-------PSNNTCIEMVASFVKSRKLREA 186

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +   M+     P    Y +LI  L  A++ +    L  +M + G + +V  F  ++  
Sbjct: 187 FGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICV 246

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             +  ++D A  LLD M       +   YN  +D F  +GK++ A + F  ++S G   D
Sbjct: 247 FAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPD 306

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           DV++  +I   CK + V+EA+ L+ E+ S    P V  YNT+ +G   + +   A  L +
Sbjct: 307 DVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLE 366

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
             +R G       Y   +  L + G + EA+ +   ++ +    ++ +YN LID LCK+G
Sbjct: 367 RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAG 425

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            L+ A ++  S+    L PN++T NIMI  LC   ++D+A  +FL ++     PD +TF 
Sbjct: 426 ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            LI G  R  + +    L  KM +    P+A + + ++
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 1/328 (0%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            YN+L+  +    +    +++  EM   G  PS  T   ++    K+RK+ EA  +++ M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +   RP    Y TL+       + +    L   M+ +G +     +  LI  + +   V
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + ALSL  EM S      +V YN       ++ +V+ A K F E++  G+  D  T+T+ 
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I  LCK   + EAVELF  L   K    + AYN +I G    G+   A+ L         
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+V+ YN ++  L   G++++A  +   M+ + AAP++ ++++LI    +  E     +
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMD-AAPNLTSYNILIDMLCKAGELEAALK 432

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +   MKE  + P+   V+I++D L K +
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQ 460



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/211 (20%), Positives = 83/211 (39%)

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
           H   +YN L+    + + +E    +  EM   G  P+  T   +     +  ++  A  +
Sbjct: 130 HSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGV 189

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            + M++         YTT I  L         + L R ++ +  E+ +  +  LI    +
Sbjct: 190 IETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAR 249

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            GR+  A  L   +       ++V YN+ I      G++D A   F +++     PD +T
Sbjct: 250 EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           F  +I    +     +  EL  ++   K +P
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVP 340


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 246/492 (50%), Gaps = 22/492 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  S+++ ++  L      D        + +  + P+++TY ILI+ FCK+G +      
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R    PN  T+ +LI       ++  A  LF  + + GC PNV+TY  LI+G C+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 179 TGHTMIALNLFEEMANGNGEI-----------GVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +G    A  ++  M  GN +I           G +  PN  TY  ++DGLCK   V +A+
Sbjct: 598 SGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L   M  E   P+ + Y++LI G C     +EA+ +F +M ++G  P+V T++ ++D L
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRL 716

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K++++D A ++L  M++    PN   Y  ++DG C +GK + A  L   ME  GC  + 
Sbjct: 717 FKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNV 776

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y  +I+G+ K  +V++ L L R+M +KG  P  VTY  L         ++ A +L DE
Sbjct: 777 VTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDE 836

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M++         Y   I+G  +  +II    L      +   + I AY  LID  CK+GR
Sbjct: 837 MKQTYWPKHMAGYRKVIEGFNRE-FIISLGLLDEIAENVAVPI-IPAYRILIDSFCKAGR 894

Query: 468 LKFAWELFCSLPH--GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           L+ A EL   +         +   Y+ +I+ L    ++DKA +L+ DM +    P++  F
Sbjct: 895 LELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIF 954

Query: 526 DMLIHGFIRINE 537
             L+ G IRIN 
Sbjct: 955 FYLVKGLIRINR 966



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 237/502 (47%), Gaps = 26/502 (5%)

Query: 85  TRLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           +R+ ++   PN+ TY IL+ C C    ++GR     I    I   C+ P+   FNSLI  
Sbjct: 323 SRMRSSSCIPNVVTYRILL-CGCLRKRQLGRCKR--ILSMMITEGCY-PSRRIFNSLIHA 378

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-I 199
                    A  L  K+   GC+P  + YN LI G+C     + +L++ E      GE +
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEML 437

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                 N V  S +   LC  G  +KA ++  +M  +   PD  TY+ +I  LC+A+  +
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  LF EM    V P V T+ +++D  CK   + +A +  D MV+ G  PN  TY  L+
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-- 377
             +    K++ A ELF  M S GC  + V+Y  LI+G+CK+ ++E+A  +Y  M      
Sbjct: 558 HAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADI 617

Query: 378 --------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                           P + TY  L  GL + H+V+ A  L D M  +G   +   Y   
Sbjct: 618 PDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG CK G + EA  +F  +       ++  Y+ LID L K  RL  A ++   +     
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PNV+ Y  MI GLC  G+ D+A  L   MEE    P+V+T+  +I GF +  +  K  E
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLE 797

Query: 544 LLHKMKEKKVMPDASIVSIVVD 565
           L+ +M  K   P+     ++++
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLIN 819



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 246/526 (46%), Gaps = 36/526 (6%)

Query: 55  DYMLRMHPSP--PPVSSFNILLA------SLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D++ RM  S   P V ++ ILL        L + K   + +   G +P+   +N LI+ +
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG----- 161
           C+ G  S  +    ++      P    +N LI G+    ++     L    KA+G     
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 162 -CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
               N +  + L   LC  G    A ++  EM +  G I     P+T TYS +I  LC  
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS-KGFI-----PDTSTYSKVIGLLCNA 493

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             VD A  LF +MK  ++ PDV TY  LI   C      +A++ F EM+  G  P+VVT+
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++    K RKM  A+ L ++M+  G  PN  TY  L+DG C  G+I +A +++  M  
Sbjct: 554 TALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613

Query: 341 --------MGCKHDD--------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                   M  K DD         +Y  L++G CK  +V+EA  L   M  +G +P  + 
Sbjct: 614 NADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIV 673

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  G  ++ +++ A  +F +M   G   +  TY++ ID L K+  +  A+++   + 
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  +IDGLCK G+   A+ L   +      PNVVTY  MI G    G++D
Sbjct: 734 ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVD 793

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           K  +L   M     AP+ +T+ +LI+           ++LL +MK+
Sbjct: 794 KCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 242/543 (44%), Gaps = 40/543 (7%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
            N+L+    +N  ++       RL   G  P+  TYN L+  F +  R+   ++    + 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
            S F  +  T    +  L    R  EA AL  K +    + + + Y  +I+GLC      
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFE 316

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A++    M + +      C PN VTY  ++ G  ++  + + K +   M  E   P   
Sbjct: 317 EAMDFLSRMRSSS------CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRR 370

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM------DEAS 297
            +NSLIH  C + D++ A +L  +M D G QP  V +N+++  +C N K+      + A 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +    M+   V  N    + L    C  GK  +A  +   M S G   D  +Y+ +I   
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   +V+ A  L+ EM S  + P V TY  L     ++  ++ A K FDEM RDG A + 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYT  I    K   +  A ELF  +    C  ++  Y  LIDG CKSG+++ A +++  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 478 LPHGVLVP----------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +     +P                N+ TY  ++ GLC   ++ +ARDL   M      P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN---EISLKSLP 578
            I +D LI GF ++ +  +   +  KM E+   P+    S ++D L K+   +++LK L 
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS 730

Query: 579 SFL 581
             L
Sbjct: 731 RML 733



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 149/369 (40%), Gaps = 48/369 (13%)

Query: 244 TYNSLIHGL-CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR----KMDEASR 298
            Y++L+  L C  ND    ++   E+ D+  +      NV++ + C+N      ++E  R
Sbjct: 164 VYHALLEVLGCGGND-RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGR 222

Query: 299 LLDLMVQRGVRPNACTYNTL--------------------------MDGFC------LMG 326
           L DL    G +P+  TYN L                          MDG+       L+ 
Sbjct: 223 LKDL----GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLC 278

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K  R  E    +E    K D V Y  +I+G C+    EEA+     M S    P VVTY 
Sbjct: 279 KAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G     Q+    ++   M  +G     R + + I   C++G    A +L + +   
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 447 KCELDIQAYNCLIDGLCKSGR------LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
            C+     YN LI G+C + +      L+ A + +  +    +V N V  + + + LC  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGA 458

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G+ +KA  +  +M      PD  T+  +I      ++      L  +MK   V+PD    
Sbjct: 459 GKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY 518

Query: 561 SIVVDLLVK 569
           +I++D   K
Sbjct: 519 TILIDSFCK 527



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 11/248 (4%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N+LI   C+N     AL     +   G KP+ +TYN L     E  +++ A  +  EM  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D  T   F+  LCK G   EA+ L         +LD   Y  +I GLC++   + 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLCEASLFEE 317

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +    +     +PNVVTY I++ G     Q+ + + +   M      P    F+ LIH
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF----LVQERQ 586
            + R  + S   +LL KM +    P   + +I++  +  NE     LPS     L ++  
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE----KLPSLDVLELAEKAY 433

Query: 587 GEVGESNV 594
           GE+ +++V
Sbjct: 434 GEMLDAHV 441


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 218/406 (53%), Gaps = 11/406 (2%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
            A+ +NSLI          +A A++  +   G  P+  T+N L+N   +         LF
Sbjct: 88  TASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLF 147

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           EEM N N      C PN +TYS +ID +CK G V+KA  +FL MK     P++ TY S+I
Sbjct: 148 EEMQNQN------CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            GL  +   ++A  LF EM  +G+  + V +N ++  L ++ + D A++L   M+ +G++
Sbjct: 202 DGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQ 261

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  T+ +L+ G  + G+ + A  +F     +GC  D   YN+LI+  CK+K ++EA  +
Sbjct: 262 PDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEI 321

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           + E+   G+ P V T+N L  GL +  ++  A  L  +M+R G   D   Y T IDGL K
Sbjct: 322 FGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRK 381

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +G + EA +L   ++ L  E D+  YN LID  CK GR++ A  LF  +       N VT
Sbjct: 382 SGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVT 440

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAA----APDVITFDMLIHG 531
           YN ++ GLC  G++D+A  LF  M++        PD +T+  L++G
Sbjct: 441 YNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 228/416 (54%), Gaps = 17/416 (4%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSL 114
           H      S++N L+ +  K  +    L        +GL P+ YT+N+L+N F K  RV  
Sbjct: 83  HRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDS 142

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            +  F  +     +PN  T++ LI  +     + +A  +F  +K+ GC PN+ TY ++I+
Sbjct: 143 VWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID 202

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GL ++GH   A  LFEEM +     G+V     V Y+++I GL + G  D A  LF +M 
Sbjct: 203 GLGKSGHVDKAFFLFEEMTSE----GLVA--TRVVYNSLIHGLGRSGRADAAAKLFREML 256

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + + PD VT+ SL++GL  A   +EA+R+F E  D G    V  +NV++D LCK++++D
Sbjct: 257 SKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLD 316

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  +   + + G+ P+  T+N LMDG C  G+I+ A  L G M+  GC  D   YN LI
Sbjct: 317 EAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLI 376

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G  K+  VEEA  L  EM S G +P VVTYNTL     +  ++E AL+LF+E+   G  
Sbjct: 377 DGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF- 435

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC----ELDIQAYNCLIDGLCKSG 466
           A+T TY T ++GLC  G + EA +LF  ++        + D   Y  L++G  ++G
Sbjct: 436 ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/416 (35%), Positives = 214/416 (51%), Gaps = 11/416 (2%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            YN LI+ F K G        +  + +S   P+  TFN L+       R+     LF ++
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           +   C PNVITY+ LI+ +C+ G    AL +F +M +        C+PN  TY+++IDGL
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRG------CRPNIFTYTSMIDGL 204

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            K G VDKA  LF +M  E +    V YNSLIHGL  +   + A +LF EM+ +G+QP  
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VTF  ++  L    +  EA R+       G   +   YN L+D  C   +++ A E+FG 
Sbjct: 265 VTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGE 324

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +E  G   D  ++N L++G CK+  + +A  L  +M   G  P V  YNTL  GL +  +
Sbjct: 325 LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGR 384

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           VE A +L  EMQ  G   D  TY T ID  CK G I +A+ LF  +   K   +   YN 
Sbjct: 385 VEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISA-KGFANTVTYNT 443

Query: 458 LIDGLCKSGRLKFAWELFCSLPH----GVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           +++GLC +GR+  A++LF  +      GV+ P+ VTY  ++ G    G  + A  L
Sbjct: 444 ILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 182/350 (52%)

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           G    G ++K+     +M+          YNSLI     A    +A  ++  M   G++P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
              TFNV+M+   K +++D   +L + M  +   PN  TY+ L+D  C  G + +A ++F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M+S GC+ +  +Y  +I+G  K+  V++A  L+ EM S+G+  T V YN+L  GL   
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            + + A KLF EM   G+  D  T+T+ + GL   G   EA  +F+  R + C LD+  Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N LID LCKS RL  AWE+F  L    LVP+V T+N ++ GLC  G++  A  L  DM+ 
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKR 362

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
               PDV  ++ LI G  +     +  +LL +M+     PD    + ++D
Sbjct: 363 AGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 188/356 (52%), Gaps = 14/356 (3%)

Query: 188 LFEEMANGNGEIGVV--------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +F E+A G    G++              C      Y+++ID   K G+  KA A++  M
Sbjct: 56  IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               + PD  T+N L++    A   +   +LF EM +Q   P+V+T+++++D +CK   +
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           ++A ++   M  RG RPN  TY +++DG    G +++A  LF  M S G     V YN L
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G  ++   + A  L+REM+SKG++P  VT+ +L  GL    +   A ++F E +  G 
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           A D   Y   ID LCK+  + EA E+F  L       D+  +N L+DGLCKSGR+  A+ 
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
           L   +      P+V  YN +I GL   G++++A  L L+M+     PDV+T++ LI
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 129/254 (50%)

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L  G+   G + ++ E    ME   C     +YN LI+ + K    ++AL++YR M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           ++P   T+N L     +  +V+   KLF+EMQ    + +  TY+  ID +CK G + +A+
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           ++F  ++   C  +I  Y  +IDGL KSG +  A+ LF  +    LV   V YN +I GL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G+ D A  LF +M      PD +TF  L++G       S+   +  + ++     D 
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 558 SIVSIVVDLLVKNE 571
           ++ ++++D L K++
Sbjct: 300 NLYNVLIDTLCKSK 313



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 35/295 (11%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
            A  YN+L+D F   G   +A  ++  M   G + D  ++N+L+N + K K V+    L+
Sbjct: 88  TASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLF 147

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EM ++   P V+TY+ L   + +   VE ALK+F +M+  G   +  TYT+ IDGL K+
Sbjct: 148 EEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKS 207

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT- 489
           G++ +A  LF  +           YN LI GL +SGR   A +LF  +    L P+ VT 
Sbjct: 208 GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267

Query: 490 ----------------------------------YNIMIQGLCNDGQMDKARDLFLDMEE 515
                                             YN++I  LC   ++D+A ++F ++EE
Sbjct: 268 TSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEE 327

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +   PDV TF+ L+ G  +         LL  MK     PD ++ + ++D L K+
Sbjct: 328 DGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKS 382



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 1/222 (0%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L  GY     +E+++   + M       T   YN+L     +    + AL ++  M + G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  DT T+   ++   K   +    +LF  ++   C  ++  Y+ LID +CK G ++ A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F  +      PN+ TY  MI GL   G +DKA  LF +M         + ++ LIHG 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 533 IRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDLLVKNEIS 573
            R        +L  +M  K + PD  +  S+V  L V    S
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRAS 281



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 12/151 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++AF +   M R   +P  V+ +N L+  L K+   +        + + G  P++ TYN 
Sbjct: 351 HDAFILLGDMKRAGCTPD-VTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNT 409

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  CK GR+      F  I    F  N  T+N+++ GL    R+ EA  LF  +K   
Sbjct: 410 LIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQET 468

Query: 162 CE----PNVITYNTLINGLCRTGHTMIALNL 188
            +    P+ +TY TL+NG  + G + +A +L
Sbjct: 469 VDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 35/170 (20%)

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
           R +     G    G + ++VE  + +   +C L   AYN LID   K+            
Sbjct: 55  RIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKA------------ 102

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
                                  G   KA  ++  M ++   PD  TF++L++ F +   
Sbjct: 103 -----------------------GYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKR 139

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              V +L  +M+ +   P+    SI++D + K     K+L  FL  + +G
Sbjct: 140 VDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRG 189


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 247/512 (48%), Gaps = 17/512 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S+N +++ LA     D        +   G  P++  +  LI+ FCK G+  +G   
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             + L+  F P+   + S+I G      +          KA     +VI+Y T+I GL  
Sbjct: 65  LNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKA---SLDVISYTTVIKGLAD 120

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +     A  LFEE+          C PN V Y+ +IDGL K G ++     F +M   + 
Sbjct: 121 SKRIDEACELFEELKTAG------CSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P   TY  +I GLC A    +A ++F +M+ +G  P  +T+  ++D   K  KMDEA +
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LLD+M+ +G  P A TY +++ GFC +  IN A+E+   M   GC+     +  L++ Y 
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                EEA  +  EM ++G  P V+ Y +L   LF   +V  A  +FD M   G A D  
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I    K G +  A E+   +       D  AYN L+DG  K  R+  A+ ++  +
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFDMLIHGFIRINE 537
               + PN VT+N+++ GL  DG+ D+A  LF +M E+    P ++++ +LI G  +   
Sbjct: 415 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGR 474

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            S+      +M ++ ++P+    + ++  L K
Sbjct: 475 VSEAFLQFQEMIDRGIIPECHTYTSLIYSLAK 506



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 241/508 (47%), Gaps = 76/508 (14%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA----TFNSLIKGLHAESRIME 149
           P+++ Y  +I+ +CK G +  G+           TP A+    ++ ++IKGL    RI E
Sbjct: 74  PDVFLYTSVIHGYCKAGDLDTGYF-------RAVTPKASLDVISYTTVIKGLADSKRIDE 126

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN------------- 196
           A  LF +LK  GC PNV+ Y  +I+GL + G     L  FEEM+  +             
Sbjct: 127 ACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVID 186

Query: 197 ----------------GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                             +   C P+T+TY+T+IDG  K   +D+A+ L   M  +   P
Sbjct: 187 GLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEP 246

Query: 241 DVVTYNSLIHGLCHANDWNEAKR-------------LFI--------------------- 266
             VTY S++HG C  +  NEAK              LFI                     
Sbjct: 247 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVL 306

Query: 267 -EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  +G  P V+ +  ++D L    ++ EA  + D M+++G  P+A TY T++  F  +
Sbjct: 307 TEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI 366

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G +  A E+   M   G   D  +YN L++GY K + V++A  +Y  MV+ GIKP  VT+
Sbjct: 367 GNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTF 426

Query: 386 NTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           N L  GLF+  + + A  LF EM +++ V     +YT  IDGL K G + EA   F+ + 
Sbjct: 427 NVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMI 486

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 +   Y  LI  L K+GR+  A +L   +    + P+V  Y+ +I GL +   +D
Sbjct: 487 DRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVD 546

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGF 532
            A D+F +M +   AP+ +T+ +L  GF
Sbjct: 547 TAWDVFQEMMKRGCAPNEVTYKVLRRGF 574



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 195/411 (47%), Gaps = 10/411 (2%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           GCEP +++YNT+I+GL        A   F  M + NG     C+P+ + ++T+I G CK 
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID-NG-----CEPDVIAFTTLIHGFCKA 55

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G       L  Q   +   PDV  Y S+IHG C A D +     +   +       V+++
Sbjct: 56  GQPQVGHKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISY 111

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++  L  ++++DEA  L + +   G  PN   Y  ++DG    G+I    + F  M  
Sbjct: 112 TTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSG 171

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
             C     +Y ++I+G CK + + +A  ++ +MV KG  P  +TY TL  G  +  +++ 
Sbjct: 172 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 231

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A KL D M   G      TY + + G CK   I EA E+   +R   CE  +  +  L+ 
Sbjct: 232 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 291

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
                GR + A+++   +      P+V+ Y  +I  L + G++ +AR +F  M E   AP
Sbjct: 292 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 351

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           D +T+  +I  F +I       E+L  M +  V PD    + ++D  VK E
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 402



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 214/442 (48%), Gaps = 10/442 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   ++N++I GL +  ++ EA   F  +   GCEP+VI + TLI+G C+ G   +   L
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +            +P+   Y+++I G CK G +D     + +      + DV++Y ++
Sbjct: 65  LNQALK-------RFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTV 114

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I GL  +   +EA  LF E+   G  P+VV +  ++D L K  ++++  +  + M     
Sbjct: 115 IKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P   TY  ++DG C    +  A ++F  M   GC  D ++Y  LI+G+ K  +++EA  
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L   M++KG +PT VTY ++  G  ++  +  A ++  +M+  G       +T+ +    
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
             G   EA ++   +    C  D+  Y  LID L  +GR+  A  +F S+      P+ +
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY  +IQ     G ++ A ++   M ++   PD   ++ L+ G++++    +   +  +M
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414

Query: 549 KEKKVMPDASIVSIVVDLLVKN 570
               + P+A   ++++  L K+
Sbjct: 415 VASGIKPNAVTFNVLMHGLFKD 436



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 179/379 (47%), Gaps = 9/379 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+  TY  LI+ F K  ++         +L     P A T+ S++ G      I EA
Sbjct: 208 GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA 267

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVT 209
             +  +++  GCEP +  + +L++     G    A  +  EM A G       C P+ + 
Sbjct: 268 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG-------CAPDVIL 320

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+++ID L   G V +A+ +F  M ++   PD +TY ++I       +   A  +   M 
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             GV P    +N +MD   K  ++D+A  + D MV  G++PNA T+N LM G    GK +
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 440

Query: 330 RAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           RA  LF  M E        VSY ILI+G  K   V EA   ++EM+ +GI P   TY +L
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSL 500

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +  ++  A KL ++M + GV  D + Y+  I GL  +  +  A ++F+ +    C
Sbjct: 501 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGC 560

Query: 449 ELDIQAYNCLIDGLCKSGR 467
             +   Y  L  G   +GR
Sbjct: 561 APNEVTYKVLRRGFRAAGR 579



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 177/390 (45%), Gaps = 14/390 (3%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCF 106
           +F+ M++    P  ++ +  L+   +K    D        +   G  P   TY  +++ F
Sbjct: 200 VFEQMVQKGCVPDTIT-YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 258

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK+  ++       ++      P    F SL+    ++ R  EA  + T++ A GC P+V
Sbjct: 259 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 318

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           I Y +LI+ L  TG    A ++F+ M          C P+ +TY TII    K G V+ A
Sbjct: 319 ILYTSLIDLLFSTGRVPEARHVFDSMIEKG------CAPDALTYGTIIQNFSKIGNVEAA 372

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +   M    + PD   YNSL+ G       ++A  ++  M+  G++P+ VTFNV+M  
Sbjct: 373 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 432

Query: 287 LCKNRKMDEASRLLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
           L K+ K D A  L   M+++  V P   +Y  L+DG    G+++ A   F  M   G   
Sbjct: 433 LFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIP 492

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +  +Y  LI    K   + EA  L  +MV  G+ P V  Y+ L  GL +   V+ A  +F
Sbjct: 493 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 552

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            EM + G A +  TY     G    G  ++
Sbjct: 553 QEMMKRGCAPNEVTYKVLRRGFRAAGRALD 582



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 153/310 (49%), Gaps = 23/310 (7%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAF-CIFDYMLRMHPSPPPVSSFNILLAS--LAKNK 81
           F+SLL ++      E    V+T   A  C  D +L         S  ++L ++  + + +
Sbjct: 286 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY-------TSLIDLLFSTGRVPEAR 338

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL----RSCFTPNAATFNSL 137
           H    +   G  P+  TY  +I  F KIG V     A G IL    +S   P+   +NSL
Sbjct: 339 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE----AAGEILELMAKSGVGPDCFAYNSL 394

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           + G     R+ +A  ++ ++ A G +PN +T+N L++GL + G T  A +LF+EM     
Sbjct: 395 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE- 453

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
           E+     P  V+Y+ +IDGL K G V +A   F +M D  I P+  TY SLI+ L  A  
Sbjct: 454 EV----PPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGR 509

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EAK+L  +M+  GV P V  ++ ++  L  +  +D A  +   M++RG  PN  TY  
Sbjct: 510 IPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 569

Query: 318 LMDGFCLMGK 327
           L  GF   G+
Sbjct: 570 LRRGFRAAGR 579



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 31/255 (12%)

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           MGC+   VSYN +I+G     +++EA   +  M+  G +P V+ + TL  G  +  Q + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 401 ALKLFDEMQR-------------------------------DGVAADTRTYTTFIDGLCK 429
             KL ++  +                                  + D  +YTT I GL  
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +  I EA ELF  L+   C  ++ AY  +IDGL K+GR++   + F  +     VP   T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y ++I GLC    +  A  +F  M +    PD IT+  LI GF + ++  +  +LL  M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 550 EKKVMPDASIVSIVV 564
            K   P A     +V
Sbjct: 241 TKGPEPTAVTYGSIV 255



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 18/203 (8%)

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY---- 432
           G +PT+V+YNT+  GL  I +++ A K F+ M  +G   D   +TT I G CK G     
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 433 ---IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
              + +A++ FR         D+  Y  +I G CK+G L   +      P   L  +V++
Sbjct: 62  HKLLNQALKRFRP--------DVFLYTSVIHGYCKAGDLDTGY-FRAVTPKASL--DVIS 110

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y  +I+GL +  ++D+A +LF +++    +P+V+ +  +I G ++        +   +M 
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170

Query: 550 EKKVMPDASIVSIVVDLLVKNEI 572
               +P  +  ++V+D L K ++
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQM 193


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 259/525 (49%), Gaps = 22/525 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++AF I   M+R     P  S+++ ++  L +    +        + + G+ P++YTY I
Sbjct: 437 DKAFQIIKLMMR-KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTI 495

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ FCK+G +      F  +     +P+  T+ +L+       ++ +A+ +F ++   G
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV----------VCKPNTVTYS 211
           C PN ITY+ L++GLC+ G +  A  ++ +M   +  +G              PN VTY 
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +IDGLCK   V  A+ L   M      P+ + Y++LI G C     + A+ +F  M   
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P+V T+  ++D + K+R++D A ++L  M++    PN  TY  ++DG C +G+  +A
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   ME  GC  + V+Y  LI+G  K+ +V+ +L L+ +M+++G  P  VTY  L   
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINH 795

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
                 ++ A  L  EM++       + Y + + G  K    I ++ L   L        
Sbjct: 796 CCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKK--FIASLGLLEELESHGMVSI 853

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV---TYNIMIQGLCNDGQMDKARD 508
              Y  LID   K+GRL+ A EL   +       N+    TY  +IQ LC   Q++KA +
Sbjct: 854 APVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFE 913

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           L+ ++      P++  F  LI G I++N+ ++  +L + M ++ V
Sbjct: 914 LYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/571 (26%), Positives = 266/571 (46%), Gaps = 72/571 (12%)

Query: 64  PPPVSSFNILLASLAKN-------------KHYDTRLNATGLFPNLYTYNILINCFCKIG 110
           PP    +NI + S+                K Y+  L ++ +   + T N    C C +G
Sbjct: 376 PPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN-FARCLCGMG 434

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           +    F     ++R  F P+ +T++ +I  L    ++ +A  LF ++K+ G  P+V TY 
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            LI+  C+ G    A + F+EM +      V C P+ VTY+ ++    K   V +A  +F
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMES------VGCSPSVVTYTALLHAYLKTKQVPQASDIF 548

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD----------------QGVQ 274
            +M D    P+ +TY++L+ GLC A +  +A  ++ +M+                   + 
Sbjct: 549 HRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIA 608

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+VVT+  ++D LCK  K+ +A  LLD+M   G  PN   Y+ L+DGFC +GK++ A+E+
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   G      +Y  LI+   K++ ++ A+ +  +M+     P VVTY  +  GL  
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           I + + ALKL   M++ G   +  TYT+ IDGL K+G +  +++LF  +    C  +   
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788

Query: 455 YNCLIDGLCKSGRLKFAWEL---------------FCSLPHGV----------------- 482
           Y  LI+  C +G L  A  L               +CS+  G                  
Sbjct: 789 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESH 848

Query: 483 -LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI---TFDMLIHGFIRINEP 538
            +V     Y ++I      G+++KA +L  +M E +++ ++    T+  LI      ++ 
Sbjct: 849 GMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQL 908

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            K  EL  ++  K V+P+ S    ++  L+K
Sbjct: 909 EKAFELYSEITRKGVVPELSAFICLIKGLIK 939



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 253/545 (46%), Gaps = 37/545 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           I   M+    +P P S FN L+ S    + Y        R+   G  P    YNI I   
Sbjct: 331 IISMMMNEGCNPNP-SLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSI 389

Query: 107 CKIGRV------SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           C    +      +L    +  +L S    N     +  + L    +  +A  +   +   
Sbjct: 390 CSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRK 449

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+  TY+ +I  LC       A  LF+EM +    +GV+  P+  TY+ +ID  CK 
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS----VGVI--PDVYTYTILIDSFCKV 503

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A++ F +M+    +P VVTY +L+H         +A  +F  M+D G  P+ +T+
Sbjct: 504 GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITY 563

Query: 281 NVIMDELCKNRKMDEASRLLDLMV----------------QRGVRPNACTYNTLMDGFCL 324
           + ++D LCK  +  +A  +   M+                   + PN  TY  L+DG C 
Sbjct: 564 SALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCK 623

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K+  A+EL   M S GC+ + + Y+ LI+G+CK  +++ A  ++  M   G  PTV T
Sbjct: 624 AHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHT 683

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   +F+  +++ A+K+  +M       +  TYT  IDGLC+ G   +A++L   + 
Sbjct: 684 YTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 743

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  LIDGL KSG++  + +LF  +      PN VTY ++I   C  G +D
Sbjct: 744 KRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLD 803

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  L  +M++      V  +  ++ GF +    S    LL +++   ++  A +  +++
Sbjct: 804 EAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASL--GLLEELESHGMVSIAPVYGLLI 861

Query: 565 DLLVK 569
           D   K
Sbjct: 862 DSFSK 866



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 247/586 (42%), Gaps = 72/586 (12%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +++N L+  LA     D        ++  G   + +T        CK GR S   + 
Sbjct: 205 PSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVM 264

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              I R  F  +      +I GL   S   EA +   +++   C PNV+TY TL+ G  +
Sbjct: 265 ---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLK 321

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                    +   M N        C PN   +++++   C       A  L  +M     
Sbjct: 322 KKQLGWCKRIISMMMNEG------CNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGC 375

Query: 239 NPDVVTYNSLIHGLCHAND----------------------------------------- 257
            P  V YN  I  +C   +                                         
Sbjct: 376 PPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 435

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           +++A ++   MM +G  P   T++ ++  LC+  K+++A  L   M   GV P+  TY  
Sbjct: 436 FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTI 495

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+D FC +G I +A   F  MES+GC    V+Y  L++ Y K K+V +A  ++  MV  G
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEM----------------QRDGVAADTRTYT 421
             P  +TY+ L  GL +  + + A +++ +M                  D +A +  TY 
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDGLCK   +++A EL   +    CE +   Y+ LIDG CK G+L  A E+F  +   
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
             +P V TY  +I  +  D ++D A  +   M E++  P+V+T+  +I G  RI E  K 
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +LL  M+++   P+    + ++D L K+     SL  F     QG
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 193/471 (40%), Gaps = 66/471 (14%)

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           +LK FG  P+  TYN L+  L   G   +   + +EM+    E+G      TV       
Sbjct: 197 RLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS----ELGFCTDKFTV--GCFAQ 250

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            LCKEG    A    + ++ E+   D V    +I GL  A+ ++EA      M      P
Sbjct: 251 ALCKEGRWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIP 307

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VVT+  ++    K +++    R++ +M+  G  PN   +N+L+  +C       A +L 
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEV-------------------------------- 363
             M   GC    V YNI I   C  +E+                                
Sbjct: 368 NRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 427

Query: 364 ---------EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
                    ++A  + + M+ KG  P   TY+ +   L E  +VE A  LF EM+  GV 
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVI 487

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TYT  ID  CK G I +A   F  +  + C   +  Y  L+    K+ ++  A ++
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM----------------EENAA 518
           F  +      PN +TY+ ++ GLC  G+  KA +++  M                  ++ 
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSI 607

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           AP+V+T+  LI G  + ++     ELL  M      P+  I   ++D   K
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCK 658



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 166/403 (41%), Gaps = 40/403 (9%)

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I+   C+ G   KA     ++KD    P   TYN+L+  L  A   +   R+  EM + G
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237

Query: 273 VQPSVVTFNVIMDELCKNRKM--------------------------------DEASRLL 300
                 T       LCK  +                                 DEA   L
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFL 297

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M      PN  TY TL+ GF    ++   + +   M + GC  +   +N L++ YC  
Sbjct: 298 HRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNA 357

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLG-------LFEIHQVEHALKLFDEMQRDGV 413
           ++   A  L   M   G  P  V YN +F+G       L     +  A K+++EM     
Sbjct: 358 RDYPYAYKLLNRMAGCGCPPGYVVYN-IFIGSICSGEELPSPDLLALAEKVYEEMLASSC 416

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +      F   LC  G   +A ++ + +       D   Y+ +I  LC++ +++ A+ 
Sbjct: 417 VLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFL 476

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  +    ++P+V TY I+I   C  G +++AR  F +ME    +P V+T+  L+H ++
Sbjct: 477 LFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL 536

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           +  +  + +++ H+M +    P+    S +VD L K   S K+
Sbjct: 537 KTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKA 579



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 132/367 (35%), Gaps = 46/367 (12%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN----RKMDEASRLL 300
           YN+L   L   +     +RL  E+ +   +      NVI+ + C++    + ++E  RL 
Sbjct: 140 YNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLK 199

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG---------------CKH 345
           D     G RP+  TYN L+      G+++    +   M  +G               CK 
Sbjct: 200 DF----GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKE 255

Query: 346 -----------------DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
                            D V    +I+G  +    +EA+S    M      P VVTY TL
Sbjct: 256 GRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTL 315

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +  Q+    ++   M  +G   +   + + +   C       A +L   +    C
Sbjct: 316 LAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGC 375

Query: 449 ELDIQAYNCLIDGLCKSGR------LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
                 YN  I  +C          L  A +++  +     V N V      + LC  G+
Sbjct: 376 PPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 435

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            DKA  +   M      PD  T+  +I       +  K   L  +MK   V+PD    +I
Sbjct: 436 FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTI 495

Query: 563 VVDLLVK 569
           ++D   K
Sbjct: 496 LIDSFCK 502



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 7/229 (3%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N+++   C++    +AL     +   G +P+  TYN L   L    Q++   ++  EM  
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D  T   F   LCK G   +A+ +         +LD      +I GL ++     
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDF---KLDTVLCTQMISGLMEASLFDE 292

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A      +     +PNVVTY  ++ G     Q+   + +   M      P+   F+ L+H
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
            +    +     +LL++M      P   + +I +  +   E     LPS
Sbjct: 353 SYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGE----ELPS 397


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 280/563 (49%), Gaps = 48/563 (8%)

Query: 13  FASAPISAF----RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS 68
           FAS    AF      N  +  +  R L  R GD++      A  +FD + R   +P  ++
Sbjct: 142 FASLSHGAFGRRIAPNLQTYNIVLRSLCAR-GDLD-----RAVTLFDSLRRRQVAPDCIT 195

Query: 69  SFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            ++ L+  LAK    D  L+       +G+ P++  YN L+    K G        + ++
Sbjct: 196 -YSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKL 254

Query: 123 LRSCFT-PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++     PN AT+N ++ GL    R  E   ++ ++ A   +P+VITY  LI+GLCR+G 
Sbjct: 255 VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGD 314

Query: 182 TMIALNLFEEM---------ANGNGEIGVVCKPNTV-------------------TYSTI 213
              A  ++ E+         A  N  +   C+   V                   TY+ +
Sbjct: 315 VDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIM 374

Query: 214 IDGLCKEGFVDKAKALF-LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I GL   G VD+A  L+ L  KD    PD VT+ +LIHGLC     N+A  +F E    G
Sbjct: 375 IKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            Q  V +++ +++ LC   ++ +A ++ + M + G +PN+  YN L+ GFC + + + A 
Sbjct: 435 KQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAV 494

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            ++  M   GC    ++YN LI+G CK ++ +EA S+ REMV  G  P + TY +L  GL
Sbjct: 495 RIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL 554

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-CELD 451
           F   +++ AL ++ ++   G+  D   +   I GLC  G + EA+ +F  ++  K C  +
Sbjct: 555 FSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN L+DGL ++G +  A  L+ S+    L P++++YN  I+GLC+  ++ +   L  
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 512 DMEENAAAPDVITFDMLIHGFIR 534
           ++      P VIT+++L+   I+
Sbjct: 675 EVLSRGIIPTVITWNILVRAVIK 697



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 261/529 (49%), Gaps = 29/529 (5%)

Query: 44  VITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------- 93
            I P+ A   F  +  +    P + S N LL +  + + +    +A   F          
Sbjct: 96  AIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFS---DADAFFASLSHGAFGR 152

Query: 94  ---PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
              PNL TYNI++   C  G +      F  + R    P+  T+++L+ GL  + R+  A
Sbjct: 153 RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHA 212

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++   G +P+V+ YN L+ G  + G     + +++++    G      +PN  TY
Sbjct: 213 LDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG-----ARPNLATY 267

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++DGLCK G   +   ++ +M   N+ PDV+TY  LIHGLC + D + A R++ E++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+      +N ++   C+  ++ EA +  D     G+R N  TYN ++ G    G ++ 
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 331 AEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           A EL+  +E  + C  D V++  LI+G C+N    +A +++ E    G +  V +Y+++ 
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL  + ++  A+K++++M +DG   ++  Y   I G C+     +AV ++  +    C 
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  YN LIDGLCK+ + + A  +   +      P++ TY  +I+GL +D ++D A  +
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH---KMKEKKVMP 555
           +  +       DV+  ++LIHG        KV+E LH    MKEKK  P
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLC---SAGKVDEALHVFSDMKEKKNCP 612



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 242/458 (52%), Gaps = 13/458 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           ++D +++   + P ++++N++L  L K   +        R+ A  L P++ TY ILI+  
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+ G V      +  I+++    +AA +NSL+KG     R+ EA   F     F    N+
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK-FWDSAGFAGLRNL 368

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            TYN +I GL  +G    A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +KA
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFANKA 423

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +F + +      DV +Y+S+I+GLC+     +A +++ +M   G +P+   +N ++  
Sbjct: 424 FTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISG 483

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            C+  +  +A R+   M   G  P   TYNTL+DG C   K   A  +   M   G   D
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             +Y  LI G   +K++++ALS++++++ KG+K  V+ +N L  GL    +V+ AL +F 
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603

Query: 407 EM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           +M ++     +  TY T +DGL + GYI +A  L+ ++     E DI +YN  I GLC  
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSC 663

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            R+    +L   +    ++P V+T+NI+++ +   G +
Sbjct: 664 DRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 225/434 (51%), Gaps = 13/434 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLK--AFG--CEPNVITYNTLINGLCRTGHTMI 184
           P   + N+L+       R  +A A F  L   AFG    PN+ TYN ++  LC  G    
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ LF+ +            P+ +TYST++ GL K+  +D A  L  +M    + PDVV 
Sbjct: 177 AVTLFDSLRRRQ------VAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVC 230

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           YN+L+ G   A ++ +  R++ +++ D G +P++ T+NV++D LCK  +  E   + + M
Sbjct: 231 YNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM 290

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V   ++P+  TY  L+ G C  G ++ A  ++  +   G   D   YN L+ G+C+   V
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTT 422
           +EA   +      G++  + TYN +  GLF+   V+ A++L+D +++D     DT T+ T
Sbjct: 351 QEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I GLC+NG+  +A  +F   R+   +LD+ +Y+ +I+GLC  GRL  A +++  +    
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             PN   YN +I G C   +   A  ++  M +N  +P VIT++ LI G  +  +  + +
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529

Query: 543 ELLHKMKEKKVMPD 556
            +  +M E    PD
Sbjct: 530 SVAREMVENGFTPD 543



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 222/437 (50%), Gaps = 9/437 (2%)

Query: 141 LHAESR-IMEAAAL--FTKLKA-FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L A SR IM  AAL  F  L +  GC P + ++N L++   R      A   F  +++G 
Sbjct: 90  LSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG- 148

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
              G    PN  TY+ ++  LC  G +D+A  LF  ++   + PD +TY++L+ GL   +
Sbjct: 149 -AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR-GVRPNACTY 315
             + A  L  EM   GVQP VV +N ++    K  + ++  R+ D +V+  G RPN  TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N ++DG C  G+     E++  M +   + D ++Y ILI+G C++ +V+ A  +Y E++ 
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G+      YN+L  G  +  +V+ A K +D     G+  + RTY   I GL  +G + E
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDE 386

Query: 436 AVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           A+EL+  L + + C  D   +  LI GLC++G    A+ +F          +V +Y+ MI
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLCN G++  A  ++  M+++   P+   ++ LI GF ++   S    +  KM +    
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 555 PDASIVSIVVDLLVKNE 571
           P     + ++D L K E
Sbjct: 507 PTVITYNTLIDGLCKAE 523



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 149/318 (46%), Gaps = 36/318 (11%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +EA  ++D + +     P   +F  L+  L +N   +           +G   ++++Y+ 
Sbjct: 385 DEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +IN  C +GR+      + ++ +    PN+  +N+LI G     R  +A  +++K+   G
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC------------------ 203
           C P VITYNTLI+GLC+      A ++  EM        +                    
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564

Query: 204 -----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLIHG 251
                      K + + ++ +I GLC  G VD+A  +F  MK++ N  P++VTYN+L+ G
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           L      ++A  L+  + + G++P ++++N  +  LC   ++ E  +LLD ++ RG+ P 
Sbjct: 625 LYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPT 684

Query: 312 ACTYNTLMDGFCLMGKIN 329
             T+N L+      G I 
Sbjct: 685 VITWNILVRAVIKYGPIQ 702


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 261/542 (48%), Gaps = 33/542 (6%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVS 113
           FD +LR H     +     +   + K           G    L + N L+N   + G + 
Sbjct: 97  FDLLLRAHADAGQLKDALYVFDEMGK----------AGSRRTLRSCNRLLNQLVQAGDIG 146

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                F ++  +   P+  T   + K    + R+  AA    +++  G + N++ Y+ ++
Sbjct: 147 TAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVM 206

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +G CR G T +A  L   +            PN VTY+ ++ G CKEG +++A+ +  ++
Sbjct: 207 DGYCRIGQTEVARKLLHSLQVKG------LSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI 260

Query: 234 KD-ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           K+ E I  D V Y +LI+G C      +A R+  EM+D GVQ ++  +N +++  CK  +
Sbjct: 261 KENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGR 320

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M E  +LL     RGV  +  +YNTL+DG+C  G + +A E    M   G     ++YN 
Sbjct: 321 MGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNT 380

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L+NG+C    +++AL L+  M+ +G+ P  ++ +TL  G F+  + E AL L+ E    G
Sbjct: 381 LLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARG 440

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +A +  T  T I+GLCKN  + EA ELF  ++   C  D   Y  LIDG CK G L  A 
Sbjct: 441 LARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRAT 500

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++   + +   VP+V  +N  I GL    Q  K  D+ ++M     +P+ +T+  LI G+
Sbjct: 501 QIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGW 560

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            +         L  +M EK + P+  I S++V                    R+G+V E+
Sbjct: 561 CKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFY----------------REGKVDEA 604

Query: 593 NV 594
           N+
Sbjct: 605 NL 606



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 232/491 (47%), Gaps = 32/491 (6%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G      TYN L+N FC  G +      +  +L+    PN  + ++L+ G     +  +A
Sbjct: 370 GFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQA 429

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L+ +  A G   NV+T NT+INGLC+      A  LF  M   +      C  +++TY
Sbjct: 430 LNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWS------CPCDSLTY 483

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T+IDG CK G + +A  + ++M++    P V  +NS I GL  A    +   + +EM  
Sbjct: 484 RTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSA 543

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P+ VT+  ++   CK   + +A  L   MV++G++PN    + L+  F   GK++ 
Sbjct: 544 KGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDE 603

Query: 331 AEELFGSM-----------------------ESM-GCKHDD--VSYNILINGYCKNKEVE 364
           A  +   +                       ES+ G  H    + +NI+I G CK   V 
Sbjct: 604 ANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVA 663

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A +L+ ++  KG  P   TY++L  G      ++ A  L DEM    +  +  TY + I
Sbjct: 664 DARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLI 723

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            GLCK+  +  AV LF  L+      +   YN LIDG CK G    A++L   +    + 
Sbjct: 724 YGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQ 783

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P V TY I+I GLC  G M++A  L   M EN   P+ IT+  LI G+ R      + +L
Sbjct: 784 PTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKL 843

Query: 545 LHKMKEKKVMP 555
            ++M    ++P
Sbjct: 844 YNEMHICGLLP 854



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 238/528 (45%), Gaps = 67/528 (12%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            Y  LIN +C+ GR+         ++ +    N   +N++I G     R+ E   L    
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQAN 331

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           +  G   +  +YNTL++G CR G    A    + M   NG  G      T+TY+T+++G 
Sbjct: 332 EYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVR-NGFTGT-----TLTYNTLLNGF 385

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G +D A  L+  M    + P+ ++ ++L+ G   A    +A  L+ E + +G+  +V
Sbjct: 386 CSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNV 445

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE----- 332
           VT N +++ LCKNR+M EA  L   M +     ++ TY TL+DG+C +G + RA      
Sbjct: 446 VTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIE 505

Query: 333 ----------ELFGS--------------------MESMGCKHDDVSYNILINGYCKNKE 362
                     E+F S                    M + G   + V+Y  LI G+CK   
Sbjct: 506 MENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGN 565

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA----LKLFD-EMQRDGVAADT 417
           + +A  LY EMV KG+KP +   + L    +   +V+ A     KL D +M +D  A+  
Sbjct: 566 LHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTL 625

Query: 418 RT---------------------YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
                                  +   I GLCK G + +A  LF  L++     D   Y+
Sbjct: 626 NIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYS 685

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI G   SG +  A+ L   +    L PN+VTYN +I GLC    + +A  LF  ++  
Sbjct: 686 SLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSK 745

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
             +P+ IT++ LI G  +    ++  +L  KM ++ + P     +I++
Sbjct: 746 GISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILI 793



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 170/354 (48%), Gaps = 27/354 (7%)

Query: 65  PPVSSFNILLASL----AKNKHYDTR--LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  FN  +  L       K  D R  ++A GL PN  TY  LI  +CK G +    I 
Sbjct: 513 PSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACIL 572

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI---TYNTLING 175
           +  ++     PN    + L+   + E ++ EA  +  KL     + ++I   + +TL  G
Sbjct: 573 YFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKL----ADTDMIQDCSASTLNIG 628

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
             +  H      + E +A GN +         + ++ +I GLCK G V  A+ LF  +K 
Sbjct: 629 --KVAH------IIESLAGGNHQ------SAKIMWNIVILGLCKLGRVADARNLFEDLKV 674

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           +   PD  TY+SLIHG   +   + A  L  EM+   + P++VT+N ++  LCK+  +  
Sbjct: 675 KGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSR 734

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L + +  +G+ PNA TYNTL+DG C  G    A +L   M   G +    +Y ILI+
Sbjct: 735 AVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIH 794

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           G C    +EEA+ L  +M+   + P  +TY TL  G      ++   KL++EM 
Sbjct: 795 GLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMH 848



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 12/229 (5%)

Query: 70  FNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +NI++  L K  +  D R     L   G  P+ +TY+ LI+     G + L F     +L
Sbjct: 649 WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEML 708

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
            +  TPN  T+NSLI GL     +  A +LF KL++ G  PN ITYNTLI+G C+ G+T 
Sbjct: 709 SARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTT 768

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  L ++M      I    +P   TY+ +I GLC +G++++A  L  QM + N++P+ +
Sbjct: 769 EAFKLKQKM------IKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFI 822

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           TY +LI G     +     +L+ EM   G+ P+  T +V   E   N K
Sbjct: 823 TYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWTGHVKQAEPVVNSK 871



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 17/312 (5%)

Query: 240 PDVVTYNSLIHGLCHANDW--------------NEAKRLFIEMMD--QGVQPSVVTFNVI 283
           P ++ +  L+H L HA  +              + A  LF ++++  +    S  +F+++
Sbjct: 41  PSLLAHAQLLHILAHARRFPAARALLASLLSAHSVAPTLFPDLVEVYKDFSFSAASFDLL 100

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +       ++ +A  + D M + G R    + N L++     G I  A  +F  M   G 
Sbjct: 101 LRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGT 160

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             DD +  I+   YC++  V  A    +EM   G+   +V Y+ +  G   I Q E A K
Sbjct: 161 LPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARK 220

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI-LKCELDIQAYNCLIDGL 462
           L   +Q  G++ +  TYT  + G CK G + EA ++ + ++   K  +D  AY  LI+G 
Sbjct: 221 LLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGY 280

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+ GR++ A  +   +    +  N+  YN MI G C  G+M +   L    E      D 
Sbjct: 281 CQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDE 340

Query: 523 ITFDMLIHGFIR 534
            +++ L+ G+ R
Sbjct: 341 YSYNTLVDGYCR 352


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 242/496 (48%), Gaps = 13/496 (2%)

Query: 67  VSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           +  +N LL SLA+       K     +    + PN+YTYN ++N +CK+G V        
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           +I+ +   P+  T+ SLI G      +  A  +F ++   GC  N + Y  LI+GLC   
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A++LF +M +        C P   TY+ +I  LC      +A  L  +M++  I P
Sbjct: 303 RIDEAMDLFVKMKDDE------CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++ TY  LI  LC    + +A+ L  +M+++G+ P+V+T+N +++  CK   +++A  ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +LM  R + PN  TYN L+ G+C    +++A  +   M       D V+YN LI+G C++
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              + A  L   M  +G+ P   TY ++   L +  +VE A  LFD +++ GV  +   Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  IDG CK G + EA  +   +    C  +   +N LI GLC  G+LK A  L   +  
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P V T  I+I  L  DG  D A   F  M  +   PD  T+   I  + R      
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655

Query: 541 VNELLHKMKEKKVMPD 556
             +++ KM+E  V PD
Sbjct: 656 AEDMMAKMRENGVSPD 671



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 239/486 (49%), Gaps = 25/486 (5%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           FP + TY +LI   C   R S        +  +   PN  T+  LI  L ++ +  +A  
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G  PNVITYN LING C+ G    A+++ E M +          PNT TY+ 
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNE 433

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I G CK   V KA  +  +M +  + PDVVTYNSLI G C + +++ A RL   M D+G
Sbjct: 434 LIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P   T+  ++D LCK+++++EA  L D + Q+GV PN   Y  L+DG+C  GK++ A 
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   M S  C  + +++N LI+G C + +++EA  L  +MV  G++PTV T   L   L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +    +HA   F +M   G   D  TYTTFI   C+ G +++A ++   +R      D+
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ----------------- 495
             Y+ LI G    G+  FA+++   +      P+  T+  +I+                 
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732

Query: 496 -GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             + N  + D   +L   M E++  P+  +++ LI G   +       ++   M+  + +
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792

Query: 555 PDASIV 560
             + +V
Sbjct: 793 SPSELV 798



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 221/437 (50%), Gaps = 7/437 (1%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +N+L+  L     + E   ++ ++      PN+ TYN ++NG C+ G+   A     ++ 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
               E G+   P+  TY+++I G C+   +D A  +F +M  +    + V Y  LIHGLC
Sbjct: 246 ----EAGL--DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A   +EA  LF++M D    P+V T+ V++  LC + +  EA  L+  M + G++PN  
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY  L+D  C   K  +A EL G M   G   + ++YN LINGYCK   +E+A+ +   M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+ + P   TYN L  G  +   V  A+ + ++M    V  D  TY + IDG C++G  
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A  L   +       D   Y  +ID LCKS R++ A +LF SL    + PNVV Y  +
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I G C  G++D+A  +   M      P+ +TF+ LIHG     +  +   L  KM +  +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598

Query: 554 MPDASIVSIVVDLLVKN 570
            P  S  +I++  L+K+
Sbjct: 599 QPTVSTDTILIHRLLKD 615



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 239/556 (42%), Gaps = 90/556 (16%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++ +L+ SL     ++       ++   GL PN+ TYN LIN +CK G +      
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +     +PN  T+N LIKG + +S + +A  +  K+      P+V+TYN+LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474

Query: 179 TGHTMIALNLFEEMANG---------NGEIGVVCK--------------------PNTVT 209
           +G+   A  L   M +             I  +CK                    PN V 
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +IDG CK G VD+A  +  +M  +N  P+ +T+N+LIHGLC      EA  L  +M+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+QP+V T  +++  L K+   D A      M+  G +P+A TY T +  +C  G++ 
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654

Query: 330 RAEELFGSMESMGCKHDDVSYNILING--------------------------------- 356
            AE++   M   G   D  +Y+ LI G                                 
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714

Query: 357 -------YCKNK-------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
                  Y K K             E +  + L  +MV   + P   +Y  L LG+ E+ 
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774

Query: 397 QVEHALKLFDEMQR-DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +  A K+FD MQR +G++     +   +   CK     EA ++   +  +     +++ 
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LI GL K G  +    +F +L       + + + I+I G+   G ++   +LF  ME+
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894

Query: 516 NAAAPDVITFDMLIHG 531
           N       T+ +LI G
Sbjct: 895 NGCKFSSQTYSLLIEG 910



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 180/343 (52%), Gaps = 1/343 (0%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN+L++ L      +E K++++EM++  V P++ T+N +++  CK   ++EA++ +  +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G+ P+  TY +L+ G+C    ++ A ++F  M   GC+ ++V+Y  LI+G C  + ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+ L+ +M      PTV TY  L   L    +   AL L  EM+  G+  +  TYT  I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D LC      +A EL   +       ++  YN LI+G CK G ++ A ++   +    L 
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PN  TYN +I+G C    + KA  +   M E    PDV+T++ LI G  R         L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           L  M ++ ++PD    + ++D L K++   ++   F   E++G
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 6/129 (4%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCF 106
           +FD+M R     P    FN LL+   K K ++            G  P L +  +LI   
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
            K G    G   F  +L+  +  +   +  +I G+  +  +     LF  ++  GC+ + 
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901

Query: 167 ITYNTLING 175
            TY+ LI G
Sbjct: 902 QTYSLLIEG 910


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 239/466 (51%), Gaps = 7/466 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y++LI   C++ R    F  F  +      P+    N ++      +R  +A  L+ ++ 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
               + +V+T+N +IN LC+ G    A      M      +G+  KPN VTY+TII G C
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLME----ALGI--KPNVVTYNTIIHGYC 237

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
             G V+ A+ +F  MK   + PD  TY S I G+C      EA  +  +M + G++P+ V
Sbjct: 238 SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++D  C    ++ A    D MV+ G+ P   TYN L+    L  K++ A+ +   M
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D V+YNILINGYC+   V++A +L+ EM+SKGI+PT VTY +L   L +  ++
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  LF+++ R G+  D   +   IDG C NG +  A  + + +  +K   D   +N L
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           + G C+ G+++ A EL   +    + P+ ++YN +I G    G M  A  +  +M     
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF 537

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP-DASIVSIV 563
            P ++T++ LI G  +  E     +LL +M  K + P D + +S++
Sbjct: 538 NPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 236/461 (51%), Gaps = 19/461 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLY---------T 98
           ++AF  FD M++     P V + N +L+   K+   +    A  L+  ++         T
Sbjct: 138 DDAFECFD-MMKGKGVIPHVHACNDMLSLFLKSNRTE---KAWVLYAEMFRMRIKSSVVT 193

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +NI+IN  CK G++       G +      PN  T+N++I G  +  R+  A  +F  +K
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMK 253

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G +P+  TY + I+G+C+ G    A  + E+M     EIG+  +P  VTY+T+IDG C
Sbjct: 254 CRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK----EIGL--RPTAVTYNTLIDGYC 307

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            +G ++ A     +M  E + P V TYN LIH L      +EA  +  EM ++G+ P  V
Sbjct: 308 NKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSV 367

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N++++  C+   + +A  L D M+ +G++P   TY +L+      G++ +A++LF  +
Sbjct: 368 TYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D + +N LI+G+C N  ++ A ++ +EM    + P  VT+NTL  G     +V
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKV 487

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E A +L +EM+  G+  D  +Y T I G  K G + +A  +   +  +     +  YN L
Sbjct: 488 EAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNAL 547

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           I GLCK+     A +L   +    + PN  TY  +I+G+ N
Sbjct: 548 IQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGN 588



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 225/438 (51%), Gaps = 6/438 (1%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           ++ LI+      R  +A   F  +K  G  P+V   N +++   ++  T  A  L+ EM 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                  +  K + VT++ +I+ LCKEG + KAK     M+   I P+VVTYN++IHG C
Sbjct: 184 R------MRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYC 237

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                  A+ +F  M  +GV+P   T+   +  +CK  K++EAS +L+ M + G+RP A 
Sbjct: 238 SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYNTL+DG+C  G +  A +    M   G      +YN+LI+    + +++EA  + +EM
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             KG+ P  VTYN L  G      V+ A  L DEM   G+     TYT+ I  L K G +
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A +LF  +       D+  +N LIDG C +G +  A+ +   +    +VP+ VT+N +
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +QG C +G+++ AR+L  +M+     PD I+++ LI G+ +  +      +  +M     
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF 537

Query: 554 MPDASIVSIVVDLLVKNE 571
            P     + ++  L KNE
Sbjct: 538 NPTLLTYNALIQGLCKNE 555



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 192/404 (47%), Gaps = 38/404 (9%)

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +F E+    G +G+      V Y  +I   C+    D A   F  MK + + P V   N 
Sbjct: 105 VFNELGVARGVLGI---KTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACND 161

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           ++     +N   +A  L+ EM    ++ SVVTFN++++ LCK  K+ +A   + LM   G
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           ++PN  TYNT++ G+C  G++  A  +F  M+  G K D  +Y   I+G CK  ++EEA 
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEAS 281

Query: 368 SLYREMVSKGIKPTVVTYNTLFLG-----------------------------------L 392
            +  +M   G++PT VTYNTL  G                                   L
Sbjct: 282 GMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F   +++ A  +  EM   G+  D+ TY   I+G C+ G + +A  L   +     +   
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTR 401

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  LI  L K GR+K A +LF  +    + P+++ +N +I G C +G MD+A  +  +
Sbjct: 402 VTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKE 461

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           M++    PD +TF+ L+ G  R  +     EL+ +MK + + PD
Sbjct: 462 MDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPD 505



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 154/294 (52%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           + V +++++   C+ ++ D+A    D+M  +GV P+    N ++  F    +  +A  L+
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M  M  K   V++NI+IN  CK  ++++A      M + GIKP VVTYNT+  G    
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +VE A  +FD M+  GV  D+ TY +FI G+CK G + EA  +   ++ +        Y
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N LIDG C  G L+ A++    +    L+P V TYN++I  L  D +MD+A  +  +M E
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               PD +T+++LI+G+ R     K   L  +M  K + P     + ++ +L K
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSK 413



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 3/205 (1%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +EV   L + R ++  GIK T V Y+ L     E+ + + A + FD M+  GV       
Sbjct: 103 REVFNELGVARGVL--GIK-TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHAC 159

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              +    K+    +A  L+  +  ++ +  +  +N +I+ LCK G+LK A E    +  
Sbjct: 160 NDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEA 219

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PNVVTYN +I G C+ G+++ AR +F  M+     PD  T+   I G  +  +  +
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279

Query: 541 VNELLHKMKEKKVMPDASIVSIVVD 565
            + +L KMKE  + P A   + ++D
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLID 304


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 242/496 (48%), Gaps = 13/496 (2%)

Query: 67  VSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           +  +N LL SLA+       K     +    + PN+YTYN ++N +CK+G V        
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            I+ +   P+  T+ SLI G      +  A  +F ++   GC  N + Y  LI+GLC   
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A++LF +M + +      C P   TY+ +I  LC      +A  L  +M+++ I P
Sbjct: 303 RIDEAMDLFVKMKDDD------CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKP 356

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++ TY  LI  LC      +A+ L  +M+++G+ P+V+T+N +++  CK   +++A  ++
Sbjct: 357 NIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVV 416

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +LM  R +RPN  TYN L+ G+C    +++A  +   M       D V+YN LI+G C++
Sbjct: 417 ELMESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              + A  L   M  +G+ P   TY ++   L +  +VE A  LFD +++  V  +   Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  IDG CK G + EA  +   +    C  +   +N LI GLC  G+LK A  L   +  
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK 595

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P V T  I+I  L  DG  D A   F  M  +   PD  T+   I  + R      
Sbjct: 596 IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQD 655

Query: 541 VNELLHKMKEKKVMPD 556
             +++ KMKE  V PD
Sbjct: 656 AEDMVAKMKENGVSPD 671



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 242/488 (49%), Gaps = 10/488 (2%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKG 140
            Y + +   GL P+ +TY  LI  +C+   +   F  F  + L+ C   N   +  LI G
Sbjct: 239 QYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGC-RRNEVAYTHLIHG 297

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L  E RI EA  LF K+K   C P V TY  LI  LC +     ALNL +EM     E G
Sbjct: 298 LCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME----EKG 353

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           +  KPN  TY+ +ID LC +  ++KA+ L  QM ++ + P+V+TYN+LI+G C      +
Sbjct: 354 I--KPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  +   M  + ++P+  T+N ++   CK R + +A  +L+ M++R V P+  TYN+L+D
Sbjct: 412 ALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLID 470

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G C  G  + A  L   M   G   D  +Y  +I+  CK+K VEEA  L+  +  K + P
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP 530

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VV Y  L  G  +  +V  A  + ++M       ++ T+   I GLC +G + EA  L 
Sbjct: 531 NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLE 590

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +  +  +  +     LI  L K G    A+  F  +      P+  TY   IQ  C +
Sbjct: 591 EKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCRE 650

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SI 559
           G++  A D+   M+EN  +PD+ T+  LI G+  +   +    +L +M +    P   + 
Sbjct: 651 GRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTF 710

Query: 560 VSIVVDLL 567
           +S++  LL
Sbjct: 711 LSLIKHLL 718



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 240/486 (49%), Gaps = 25/486 (5%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           +P + TY +LI   C   R S        +      PN  T+  LI  L ++ ++ +A  
Sbjct: 320 YPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARE 379

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G  PNVITYN LING C+ G    AL++ E M + N       +PNT TY+ 
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN------LRPNTRTYNE 433

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I G CK   V KA  +  +M +  + PDVVTYNSLI G C + +++ A RL   M D+G
Sbjct: 434 LIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P   T+  ++D LCK+++++EA  L D + Q+ V PN   Y  L+DG+C  GK+N A 
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   M S  C  + +++N LI+G C + +++EA  L  +MV   ++PTV T   L   L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +    +HA + F +M   G   D  TYTTFI   C+ G + +A ++   ++      D+
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ---------------GL 497
             Y+ LI G    GR   A+ +   +      P+  T+  +I+               G+
Sbjct: 673 FTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGV 732

Query: 498 C---NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           C   N  + D   +L   M E+   P+  +++ L+ G   I       ++   M++K+ +
Sbjct: 733 CVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGI 792

Query: 555 PDASIV 560
             + +V
Sbjct: 793 SPSELV 798



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 223/437 (51%), Gaps = 7/437 (1%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +N+L+  L     + E   ++ ++      PN+ TYN ++NG C+ G+   A N +  M 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEA-NQYVSMI 244

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
              G       P+  TY+++I G C+   +D A  +F +M  +    + V Y  LIHGLC
Sbjct: 245 VEAG-----LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC 299

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                +EA  LF++M D    P+V T+ V++  LC + +  EA  L+  M ++G++PN  
Sbjct: 300 VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIH 359

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY  L+D  C   K+ +A EL G M   G   + ++YN LINGYCK   +E+AL +   M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+ ++P   TYN L  G  +   V  A+ + ++M    V  D  TY + IDG C++G  
Sbjct: 420 ESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A  L   +       D   Y  +ID LCKS R++ A +LF SL    ++PNVV Y  +
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I G C  G++++A  +   M      P+ +TF+ LIHG     +  +   L  KM +  +
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598

Query: 554 MPDASIVSIVVDLLVKN 570
            P  S  +I++  L+K+
Sbjct: 599 QPTVSTDTILIHRLLKD 615



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 238/556 (42%), Gaps = 90/556 (16%)

Query: 65  PPVSSFNILLASLA------KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++ +L+ SL       K +    ++   GL PN+ TYN LIN +CK G +      
Sbjct: 356 PNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDV 415

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      PN  T+N LIKG + +  + +A  +  K+      P+V+TYN+LI+G CR
Sbjct: 416 VELMESRNLRPNTRTYNELIKG-YCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474

Query: 179 TGHTMIALNLFEEMANG---------NGEIGVVCK--------------------PNTVT 209
           +G+   A  L   M +             I  +CK                    PN V 
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVM 534

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +IDG CK G V++A  +  +M  +N  P+ +T+N+LIHGLC      EA  L  +M+
Sbjct: 535 YTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
              +QP+V T  +++  L K+   D A R    M+  G +P+A TY T +  +C  G++ 
Sbjct: 595 KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654

Query: 330 RAEELFGSMESMGCKHDDVSYNILING--------------------------------- 356
            AE++   M+  G   D  +Y+ LI G                                 
Sbjct: 655 DAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLI 714

Query: 357 -------YCKNK-------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
                  Y K K             E +  + L  +MV  G+ P   +Y  L LG+ EI 
Sbjct: 715 KHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIG 774

Query: 397 QVEHALKLFDEMQ-RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +  A K+FD MQ ++G++     +   +   CK     EA ++   +  +     +++ 
Sbjct: 775 NLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESC 834

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LI  L K G  +    +F +L       + + + I+I G+   G ++   +LF  ME+
Sbjct: 835 KILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894

Query: 516 NAAAPDVITFDMLIHG 531
           N       T+ +LI G
Sbjct: 895 NGCTFSSQTYSLLIEG 910



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 204/402 (50%), Gaps = 16/402 (3%)

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKP--------NTVTYSTIIDGLCKEGFVDKAKAL 229
           R  H++ +      +   NG +GVV K         ++V  +  +  LC++   D++  L
Sbjct: 118 RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFEL 177

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             ++        +  YN+L++ L      +E K++++EM++  V P++ T+N +++  CK
Sbjct: 178 KYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
              ++EA++ + ++V+ G+ P+  TY +L+ G+C    ++ A ++F  M   GC+ ++V+
Sbjct: 231 VGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA 290

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  LI+G C  + ++EA+ L+ +M      PTV TY  L   L    +   AL L  EM+
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G+  +  TYT  ID LC    + +A EL   +       ++  YN LI+G CK G ++
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A ++   +    L PN  TYN +I+G C    + KA  +   M E    PDV+T++ LI
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            G  R         LL  M ++ ++PD    + ++D L K++
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSK 511


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 162/558 (29%), Positives = 269/558 (48%), Gaps = 40/558 (7%)

Query: 48  NEAFCIFDYMLRMHP-SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           ++AF  F  +    P + P V  +N+LL S  K +  +        +   G+ P  YT+N
Sbjct: 92  DKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +LI   C    V      F  +      PN  TF  L++G        +   L   +++F
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  PN + YNT+++  CR G    +  + E+M     E G+V  P+ VT+++ I  LCKE
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR----EEGLV--PDIVTFNSRISALCKE 265

Query: 221 GFVDKAKALFLQMK-DENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           G V  A  +F  M+ DE +    P+ +TYN ++ G C      +AK LF  + +     S
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           + ++N+ +  L ++ K  EA  +L  M  +G+ P+  +YN LMDG C +G ++ A+ + G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M+  G   D V+Y  L++GYC   +V+ A SL +EM+     P   T N L   L+++ 
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL---------- 446
           ++  A +L  +M   G   DT T    +DGLC +G + +A+E+ + +R+           
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505

Query: 447 -------------KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
                         C  D+  Y+ L++GLCK+GR   A  LF  +    L P+ V YNI 
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I   C  G++  A  +  DME+      + T++ LI G    N+  +++ L+ +MKEK +
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625

Query: 554 MPDASIVSIVVDLLVKNE 571
            P+    +  +  L + E
Sbjct: 626 SPNICTYNTAIQYLCEGE 643



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 253/547 (46%), Gaps = 58/547 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF-------------PNLYTYNILINCFCKIGR 111
           P + +FN  +++L K       L+A+ +F             PN  TYN+++  FCK+G 
Sbjct: 250 PDIVTFNSRISALCKEGKV---LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +      F  I  +    +  ++N  ++GL    + +EA  +  ++   G  P++ +YN 
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L++GLC+ G    A  +   M   NG    VC P+ VTY  ++ G C  G VD AK+L  
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKR-NG----VC-PDAVTYGCLLHGYCSVGKVDAAKSLLQ 420

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M   N  P+  T N L+H L      +EA+ L  +M ++G     VT N+I+D LC + 
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480

Query: 292 KMDEASRLL-----------------------DLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           ++D+A  ++                       D +++    P+  TY+TL++G C  G+ 
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ LF  M     + D V+YNI I+ +CK  ++  A  + ++M  KG   ++ TYN+L
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
            LGL   +Q+     L DEM+  G++ +  TY T I  LC+   + +A  L   +     
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELF------CSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
             ++ ++  LI+  CK      A E+F      C    G+       Y++M   L   GQ
Sbjct: 661 APNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-------YSLMFNELLAAGQ 713

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           + KA +L   + +         +  L+    + +E    + +LHKM ++    D + +  
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMP 773

Query: 563 VVDLLVK 569
           V+D L K
Sbjct: 774 VIDGLGK 780



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 197/431 (45%), Gaps = 26/431 (6%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S+NIL+  L K       K     +   G+ P+  TY  L++ +C +G+V      
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++R+   PNA T N L+  L    RI EA  L  K+   G   + +T N +++GLC 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 179 TGHTMIALNLFEEMAN---------GNGEIGVV--------CKPNTVTYSTIIDGLCKEG 221
           +G    A+ + + M           GN  IG+V        C P+ +TYST+++GLCK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              +AK LF +M  E + PD V YN  IH  C     + A R+  +M  +G   S+ T+N
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  L    ++ E   L+D M ++G+ PN CTYNT +   C   K+  A  L   M   
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEH 400
               +  S+  LI  +CK  + + A  ++   VS  G K  +  Y+ +F  L    Q+  
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLK 716

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A +L + +   G    T  Y   ++ LCK   +  A  +   +       D  A   +ID
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776

Query: 461 GLCKSGRLKFA 471
           GL K G  K A
Sbjct: 777 GLGKMGNKKEA 787



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 13/284 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +++ LL  L K   +    N         L P+   YNI I+ FCK G++S  F  
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +     +  T+NSLI GL  +++I E   L  ++K  G  PN+ TYNT I  LC 
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A NL +EM   N        PN  ++  +I+  CK    D A+ +F +      
Sbjct: 642 GEKVEDATNLLDEMMQKN------IAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSIC 694

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
                 Y+ + + L  A    +A  L   ++D+G +     +  +++ LCK  +++ AS 
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +L  M+ RG   +      ++DG   MG    A      M  M 
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMA 798


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 235/477 (49%), Gaps = 9/477 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++   N ++       R       +G +L+    P   T+N+L+     E R  EA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 151 AALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           + L  ++  +  G   N +T+N +I+ L R GH   A+ L + M           K ++ 
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-------KASSF 309

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +I  L + GFV KA+AL ++M++E I P VVTYN++IHGL        A+  F EM
Sbjct: 310 TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM 369

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G+ P V+T+N +++  CK   + EA  LL  + + G+ P   TYNTL+DG+C +G +
Sbjct: 370 RAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDL 429

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L   M   GC  D  +Y IL+NG  K + +  A   + EM+SKG++P    YNT 
Sbjct: 430 AEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTR 489

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                 +     A +L + M   G+  DT TY   IDGLCK G + +A  L   +     
Sbjct: 490 ICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGL 549

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D   Y CLI   C+ G L+ A +L   +    L P+VVTY I++   C  G +  A  
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYG 609

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            F  M +    P+ IT+++LIH               H+M E+ + P+    ++++D
Sbjct: 610 WFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLID 666



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 235/488 (48%), Gaps = 16/488 (3%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT--------RLNATGLFPNLYTYNILIN 104
           ++  ML++   P  + ++N LL S  K    D              G   N  T+N++I+
Sbjct: 224 VYGEMLQLRVEPT-IVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVIS 282

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
              + G +    +     +R     ++ T+N LI  L     + +A AL  +++  G  P
Sbjct: 283 FLAREGHLE-NAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMP 341

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
            V+TYN +I+GL +      A   F EM      +G++  P+ +TY+++++  CK G + 
Sbjct: 342 TVVTYNAIIHGLLKCEQAEAAQVKFAEMR----AMGLL--PDVITYNSLLNRYCKAGNLK 395

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  L   ++   + P V+TYN+LI G C   D  EA+RL  EM++QG  P V T+ ++M
Sbjct: 396 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILM 455

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           +   K R +  A    D M+ +G++P+   YNT +     +     A +L   M   G  
Sbjct: 456 NGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIY 515

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D V+YN++I+G CK   +++A  L  +MVS G++P  +TY  L     E   +  A KL
Sbjct: 516 PDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKL 575

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            + M  DG+     TYT  +   C+ G +  A   FR +  +  E +   YN LI  LC 
Sbjct: 576 LNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCM 635

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +GR   A+  F  +    L PN  TY ++I G C +G    A  L+ +M +N   PD  T
Sbjct: 636 TGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCT 695

Query: 525 FDMLIHGF 532
            + L  GF
Sbjct: 696 HNALFKGF 703



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 211/455 (46%), Gaps = 5/455 (1%)

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
           +L   AF  +      P+    N +++ L   +R  +  A++ ++     EP ++TYNTL
Sbjct: 184 TLCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTL 243

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           ++   + G    A  L +EM    G   +    N VT++ +I  L +EG ++ A  L   
Sbjct: 244 LDSFLKEGRKDEASMLLKEMETQGGGFSL----NDVTFNVVISFLAREGHLENAVKLVDS 299

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+         TYN LI  L       +A+ L +EM ++G+ P+VVT+N I+  L K  +
Sbjct: 300 MRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQ 358

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            + A      M   G+ P+  TYN+L++ +C  G +  A  L G +   G     ++YN 
Sbjct: 359 AEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 418

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+GYC+  ++ EA  L  EMV +G  P V TY  L  G  ++  +  A + FDEM   G
Sbjct: 419 LIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG 478

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D   Y T I           A +L   + +     D   YN +IDGLCK+G LK A 
Sbjct: 479 LQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 538

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L   +    L P+ +TY  +I   C  G + +AR L   M  +   P V+T+ +L+H  
Sbjct: 539 RLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTC 598

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            R            KM +  + P+    ++++  L
Sbjct: 599 CRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 179/379 (47%), Gaps = 36/379 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++  L K +  +        + A GL P++ TYN L+N +CK G +      
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G + R+   P   T+N+LI G      + EA  L  ++   GC P+V TY  L+NG  +
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 179 TGHTMIALNLFEEMANGNGEIGV------VCK-----------------------PNTVT 209
             +  +A   F+EM +   +         +C                        P+TVT
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ IIDGLCK G +  AK L  +M  + + PD +TY  LIH  C      EA++L   M+
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+QPSVVT+ +++   C+   +  A      M+  G+ PN  TYN L+   C+ G+  
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A   F  M   G   +  +Y +LI+G C+     +A+ LY EM   GI P   T+N LF
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 700

Query: 390 LGLFEIHQVEHALKLFDEM 408
            G  E H + HA++  + +
Sbjct: 701 KGFDEGH-MYHAIEYMENI 718



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 3/345 (0%)

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           A F  +    + PDV   N ++  L  A  W++ + ++ EM+   V+P++VT+N ++D  
Sbjct: 188 AAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSF 247

Query: 288 CKNRKMDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            K  + DEAS LL  M  +G     N  T+N ++      G +  A +L  SM  +  K 
Sbjct: 248 LKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKA 306

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
              +YN LI    +   V +A +L  EM ++GI PTVVTYN +  GL +  Q E A   F
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM+  G+  D  TY + ++  CK G + EA+ L   LR       +  YN LIDG C+ 
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G L  A  L   +      P+V TY I++ G      +  AR+ F +M      PD   +
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +  I   + ++      +L   M  K + PD    ++++D L K 
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKT 531


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 265/517 (51%), Gaps = 25/517 (4%)

Query: 2   GLESCCNRSFSFASAPISAFRS--NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLR 59
           GL+     S  F+   ++   +  NF    +H      R G++      E     +YM  
Sbjct: 43  GLKGNLQHSERFSKGALNGVNTSLNFEESEIHHLCRLIRNGELE-----EGSRFLEYMTN 97

Query: 60  MHPSPPPVSSFNIL--LASLAKNKHYDTR----LNATGLFPNLYTYNILINCFCKIGRVS 113
               P  V+   ++     + + K+  TR    L  +G   +  +YN+LIN +CK G + 
Sbjct: 98  KGKIPDVVACTALIREFCKIGRTKNA-TRIMGILEESGAVIDANSYNVLINAYCKSGEIE 156

Query: 114 LGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                  R+L  +   PNAAT+++++  L    ++ +A  +  +     C P+V+T   L
Sbjct: 157 EAL----RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVL 212

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+  C+      A+ LF EM  G G     CKP+ VTY+ +I G CKEG +D+A     +
Sbjct: 213 IDATCKESGVGQAMKLFNEM-RGKG-----CKPDVVTYNVLIKGFCKEGRLDEAIIFLKK 266

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +       DV+++N ++  LC    W +A +L   M+ +G  PSVVTFN++++ LC+   
Sbjct: 267 LPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGL 326

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + +A  +L++M + G  PN+ ++N L+ GFC    I+RA E    M S GC  D V+YNI
Sbjct: 327 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNI 386

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L+   CK+ +V++A+ +  ++ SKG  P++++YNT+  GL ++ + E A++L +EM   G
Sbjct: 387 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 446

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D  T T+ + GL + G + EA++ F  L+    + +   YN ++ GLCK+ +   A 
Sbjct: 447 LKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAI 506

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           +    +      P   +Y  +I+G+  +G  ++A  L
Sbjct: 507 DFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKL 543



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 202/413 (48%), Gaps = 12/413 (2%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+    LI   C+ G T  A  +   +     E G V   N+  Y+ +I+  CK G +
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILE----ESGAVIDANS--YNVLINAYCKSGEI 155

Query: 224 DKAKALFLQMKDE-NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++A    L++ D  ++ P+  TY++++  LC      +A ++    +     P VVT  V
Sbjct: 156 EEA----LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTV 211

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK   + +A +L + M  +G +P+  TYN L+ GFC  G+++ A      + S G
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C+ D +S+N+++   C      +A+ L   M+ KG  P+VVT+N L   L +   +  AL
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKAL 331

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            + + M + G   ++R++   I G C    I  A+E    +    C  DI  YN L+  L
Sbjct: 332 NVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTAL 391

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G++  A  +   L      P++++YN +I GL   G+ + A +L  +M      PD+
Sbjct: 392 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 451

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV-SIVVDLLVKNEISL 574
           IT   ++ G  R  +  +  +  H +K   + P+A I  SI++ L    + SL
Sbjct: 452 ITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSL 504



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 38/307 (12%)

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            L +N +++E SR L+ M  +G  P+      L+  FC +G+   A  + G +E  G   
Sbjct: 78  RLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVI 137

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D  SYN+LIN YCK+ E+EE                                   AL++ 
Sbjct: 138 DANSYNVLINAYCKSGEIEE-----------------------------------ALRVL 162

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D      VA +  TY   +  LC  G + +A+++       KC  D+     LID  CK 
Sbjct: 163 DHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKE 219

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
             +  A +LF  +      P+VVTYN++I+G C +G++D+A      +       DVI+ 
Sbjct: 220 SGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISH 279

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           +M++             +LL  M  K   P     +I+++ L +  +  K+L    +  +
Sbjct: 280 NMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPK 339

Query: 586 QGEVGES 592
            G    S
Sbjct: 340 HGHTPNS 346


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 173/629 (27%), Positives = 290/629 (46%), Gaps = 81/629 (12%)

Query: 34  DLTTREGDINVITPNEAFCIFDYML-RMHPS--PPPVSSFNILLASLAKNKHYDT----- 85
           D+ T    INV+    +F    Y++ +M  S   P + ++N +L    K   +       
Sbjct: 192 DVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251

Query: 86  -RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
             +N  G+  ++ TYN+LI+  C+  R + G++    + +    PN  T+N+L+ G   E
Sbjct: 252 DHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNE 311

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV--- 201
            +++ A  L  ++  FG  PN +T+N LI+G    G+   AL +F  M    G IG    
Sbjct: 312 GKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH-MMEAKGLIGTEVS 370

Query: 202 -------VCK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
                  +CK                       +TY+ +IDGLCK GF+D+A  +  +M 
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMS 430

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + I+PD+VTY++LI+G C       AK +   +   G+ P+ + ++ ++   C+   + 
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           E  R+ + M+  G  P+  T+N L+   C  GK+  AEE    M S G   + VS++ LI
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLI 550

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTY----------------------------- 385
           NGY  + E  +A S++ EM   G  PT  TY                             
Sbjct: 551 NGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAA 610

Query: 386 ------NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
                 NTL   + +   ++ A+ LF EM +  +  D+ TYT+ I GLC+ G  + A+ L
Sbjct: 611 VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAI-L 669

Query: 440 FRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           F      +  L  +   Y C +DG+ K+G+ K  +     +    L  +VVT N MI G 
Sbjct: 670 FAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGY 729

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G+++K  DL  +M      P++ T+++L+HG+ +    S    L   M    ++PD 
Sbjct: 730 SRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDK 789

Query: 558 -SIVSIVVDLLVKN--EISLKSLPSFLVQ 583
            +  SI++ +   N  EI LK L +F+ +
Sbjct: 790 LTCYSIILGICESNMLEIGLKILKAFICR 818



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 242/483 (50%), Gaps = 12/483 (2%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G+ S  F A     R C   N + F+ LI+    E  I ++  +F  +  +G  P+V T 
Sbjct: 103 GKSSFVFGALMATYRLC-NSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N ++  + ++   +   +  +EM         +C P+  T++ +I+ LC EG   K+  L
Sbjct: 162 NAILGSIVKSCEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFKKSSYL 215

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+     P +VTYN+++H  C    +  A  L   M  +GV   V T+N+++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCR 275

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           + +  +   LL  M +R + PN  TYNTL++GF   GK+  A +L   M + G   + V+
Sbjct: 276 SNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT 335

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           +N LI+G+      +EAL ++  M +KG+  T V+Y  L  GL +  + + A   +  M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           R+GV     TYT  IDGLCKNG++ EAV +   +     + DI  Y+ LI+G C+ GRLK
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLK 455

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A E+ C +    L PN + Y+ +I   C  G + +   ++  M      PD  TF++L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLV 515

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN-EISLKSLPSFLVQERQGE 588
               +  + ++  E +  M    ++P+A    +  D L+     S + L +F V +   +
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNA----VSFDCLINGYGSSGEGLKAFSVFDEMTK 571

Query: 589 VGE 591
           VG 
Sbjct: 572 VGH 574



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 232/480 (48%), Gaps = 6/480 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++YT N ++    K       +     +L+    P+ ATFN LI  L AE    ++
Sbjct: 153 GFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKS 212

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           + L  K++  G  P ++TYNT+++  C+ G    A+ L + M N  G    VC     TY
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM-NLKGVNADVC-----TY 266

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I  LC+     K   L   M+   I+P+ VTYN+L++G  +      A++L  EM+ 
Sbjct: 267 NMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLT 326

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P+ VTFN ++D         EA ++  +M  +G+     +Y  L+DG C   + + 
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDL 386

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   +  M+  G     ++Y  +I+G CKN  ++EA+ +  EM   GI P +VTY+ L  
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALIN 446

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   + +++ A ++   + R G++ +   Y+T I   C+ G + E + ++  + +     
Sbjct: 447 GFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTP 506

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   +N L+  LCK+G++  A E    +    ++PN V+++ +I G  + G+  KA  +F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVF 566

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +M +    P   T+  L+ G  +        + L  ++      D  + + ++  + K+
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKS 626



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 225/479 (46%), Gaps = 9/479 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAA 152
           P+ +T+N+L+   CK G+V+     F R + S    PNA +F+ LI G  +    ++A +
Sbjct: 506 PDHFTFNVLVTSLCKAGKVAEA-EEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFS 564

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F ++   G  P   TY +L+ GLC+ GH + A    + + N      V    +TV  +T
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQN------VPAAVDTVMCNT 618

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I  +CK G +DKA +LF +M   +I PD  TY SLI GLC       A     E   +G
Sbjct: 619 LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 273 -VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P+ V +   +D + K  +          M + G+  +  T N ++DG+  MGKI + 
Sbjct: 679 NLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKT 738

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M +     +  +YNIL++GY K K V  +  LYR M+  GI P  +T  ++ LG
Sbjct: 739 HDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG 798

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           + E + +E  LK+       GV  D  T+   I   C NG I  A ++   +  L   LD
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLD 858

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
               + ++  L ++ R + +  +   +    + P    Y  ++ GLC  G +  A  +  
Sbjct: 859 KNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKE 918

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +M  +   P  +    ++    +  +  + + LL  M + K++P  +  + ++ L  KN
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKN 977



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 230/492 (46%), Gaps = 14/492 (2%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
            +AF +FD M ++    P   ++  LL  L K  H      +   L       +    N L
Sbjct: 561  KAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTL 619

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG- 161
            I   CK G +      FG +++    P++ T+ SLI GL  + + + A     + +A G 
Sbjct: 620  ITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGN 679

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              PN + Y   ++G+ + G         ++M     ++G+    + VT + +IDG  + G
Sbjct: 680  LVPNKVMYTCFVDGMFKAGQWKAGFYFRQQM----DKLGLT--RDVVTTNAMIDGYSRMG 733

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++K   L  +M ++N  P++ TYN L+HG       + +  L+  M+  G+ P  +T  
Sbjct: 734  KIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCY 793

Query: 282  VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             I+  +C++  ++   ++L   + RGV  +  T+N L+   C  G+IN A ++   M S+
Sbjct: 794  SIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSL 853

Query: 342  GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
            G   D  + + +++   +N   +E+  +  EM  +GI P    Y  L  GL  +  ++ A
Sbjct: 854  GISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTA 913

Query: 402  LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
              + +EM    +       +  +  L K G   EA  L R++  +K    I ++  L+  
Sbjct: 914  FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHL 973

Query: 462  LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             CK+G +  A EL   + +  L  ++V+YN++I GLC  G M  A +LF +M+ +    +
Sbjct: 974  FCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLAN 1033

Query: 522  VITFDMLIHGFI 533
            V T+  L+ G +
Sbjct: 1034 VTTYKALVGGIL 1045



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 176/447 (39%), Gaps = 83/447 (18%)

Query: 62   PSPPPVSSFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLG 115
            P+       N L+ ++ K+ + D  ++  G      + P+ +TY  LI+  C+ G+  + 
Sbjct: 608  PAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIA 667

Query: 116  FI-AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
             + A     R    PN   +   + G+    +         ++   G   +V+T N +I+
Sbjct: 668  ILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMID 727

Query: 175  GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            G  R G      +L  EM N N        PN  TY+ ++ G  K   V  +  L+  M 
Sbjct: 728  GYSRMGKIEKTHDLLFEMGNQNQ------GPNLTTYNILLHGYSKRKHVSTSFMLYRSMI 781

Query: 235  DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC------ 288
               I PD +T  S+I G+C +N      ++    + +GV+    TFN+++ + C      
Sbjct: 782  LSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEIN 841

Query: 289  -----------------------------KNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
                                         +N +  E+  +L  M ++G+ P +  Y  L+
Sbjct: 842  WAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLL 901

Query: 320  DGFCLMG-----------------------------------KINRAEELFGSMESMGCK 344
            +G C +G                                   K + A  L  SM  M   
Sbjct: 902  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLV 961

Query: 345  HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
                S+  L++ +CKN  V EAL L   M + G+K  +V+YN L  GL     +  A +L
Sbjct: 962  PTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFEL 1021

Query: 405  FDEMQRDGVAADTRTYTTFIDGLCKNG 431
            F+EM+RDG  A+  TY   + G+   G
Sbjct: 1022 FEEMKRDGFLANVTTYKALVGGILSQG 1048


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 237/498 (47%), Gaps = 23/498 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN++TYN L+  FC  G+V        ++      P+A T+N LI+G   +  I  A
Sbjct: 212 GCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESA 271

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   ++  G   +  TYN LIN LC+ G T  A +LF+ +           KPN VT+
Sbjct: 272 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG------IKPNAVTF 325

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +++I+GLCK G VD A     +M      PD  TY+S I  LC      E      EM+ 
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 385

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + V+PS V + +++ +L K R     +R    MV  G  P+  TY T M  +C+ G++N 
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE +   M   G   D ++YN L++G+    + + A+S+ ++M S    P   TY  L  
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 505

Query: 391 GLFEIHQVEHALKL-----------------FDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            L  +  VE  L L                 FD M+++    ++ TY++ ++G  ++G  
Sbjct: 506 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 565

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  L   ++     L+   Y  L+   CKS R   AW L CS+     +P++++Y  +
Sbjct: 566 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHL 625

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           + GL  +GQ DKA+++F++      +PD I + ++I G I+        E++  ++    
Sbjct: 626 LSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNC 685

Query: 554 MPDASIVSIVVDLLVKNE 571
            P     +++ + L   E
Sbjct: 686 RPSHQTYAMLTEELPDRE 703



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 243/516 (47%), Gaps = 45/516 (8%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TYN +I   C+   ++        ++RS + P+A TFNSLI G    +++  A  LF K+
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G   +V++Y  LI G C TG    A+ LF EM           +P+   Y+ ++ GL
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----------QPDMHMYAALVKGL 122

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G  ++   +  +MK+    P    Y +++   C      EA+ +  EM ++G+ P V
Sbjct: 123 CKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCV 182

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT   +++  CK  +M +A R+L+LM  RG +PN  TYN L+ GFC  GK+++A  L   
Sbjct: 183 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNK 242

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G   D V+YN+LI G C +  +E A  L R M   G+     TYN L   L +  +
Sbjct: 243 MRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGR 302

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            + A  LFD ++  G+  +  T+ + I+GLCK+G +  A +    +    C  D   Y+ 
Sbjct: 303 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS 362

Query: 458 LIDGLCK----SGRLKFAWEL-----------FCSLPHGVLV------------------ 484
            I+ LCK       L F  E+           +  + H +L                   
Sbjct: 363 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 422

Query: 485 --PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             P+VVTY   ++  C +G++++A ++ ++M +N    D + ++ L+ G   I +     
Sbjct: 423 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 482

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            +L +M     +P+     I++  LV+  +    LP
Sbjct: 483 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 518



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 226/495 (45%), Gaps = 23/495 (4%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ Y  L+   CK GR   G +   R+    + P+   + +++     E +  EA  +
Sbjct: 110 PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEM 169

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   G  P V+T   +IN  C+ G    AL + E M          CKPN  TY+ +
Sbjct: 170 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG------CKPNVWTYNAL 223

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + G C EG V KA AL  +M+   +NPD VTYN LI G C       A RL   M   G+
Sbjct: 224 VQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 283

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
                T+N +++ LCK+ + D+A  L D +  RG++PNA T+N+L++G C  GK++ A +
Sbjct: 284 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWK 343

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
               M S GC  D  +Y+  I   CK K  +E LS   EM+ K +KP+ V Y  +   L 
Sbjct: 344 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 403

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +        + + EM   G   D  TYTT +   C  G + EA  +   +      +D  
Sbjct: 404 KERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTM 463

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ-----------------G 496
           AYN L+DG    G+   A  +   +     VPN  TY I+++                 G
Sbjct: 464 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAG 523

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +    ++     LF  M++N   P+  T+  ++ GF       +   L+  MKE  +  +
Sbjct: 524 VWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 583

Query: 557 ASIVSIVVDLLVKNE 571
             I + +V    K++
Sbjct: 584 EDIYTALVTCFCKSK 598



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 182/386 (47%), Gaps = 5/386 (1%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +I  LC+   +  A      M      PD  T+NSLI G C  N  + A+ LF +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G    VV++  +++  C+  ++DEA  L   M Q    P+   Y  L+ G C  G+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
                +   M+ +G +    +Y  +++  C  ++ +EA  + +EM  KG+ P VVT   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                +  ++  AL++ + M+  G   +  TY   + G C  G + +A+ L   +R+   
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D   YN LI G C  G ++ A+ L   +    L+ +  TYN +I  LC DG+ D+A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  +E     P+ +TF+ LI+G  +  +     + L KM      PD    S  ++ L 
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 569 KNEISLKSLPSFLVQERQGEVGESNV 594
           K + S + L SF+ +  Q +V  S V
Sbjct: 369 KMKGSQEGL-SFIGEMLQKDVKPSTV 393


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 259/526 (49%), Gaps = 14/526 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F+  L  +   P   ++N ++        +D       R  A G  P++  YN 
Sbjct: 72  DEAVELFE-QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 130

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++ C  K  RV      F  + R    PN  T+N LI  L  E ++  A  +   ++  G
Sbjct: 131 ILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAG 189

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV+T N +I+ LC+      A ++FE M +       VC PN VT+S++IDGL K G
Sbjct: 190 LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK------VCTPNAVTFSSLIDGLGKCG 243

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A +L+ +M D    P  + Y SLI          +  +++ EM+  G  P +   N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             MD + K  + ++   L   +   G  P+A +Y+ L+ G    G  N   ELF +M+  
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D  +YN +I+G+CK+ +V +A  L  EM  KG  PTVVTY ++  GL +I +++ A
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 423

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF+E + +G+  +   Y++ IDG  K G I EA  +   L       ++  +NCL+D 
Sbjct: 424 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L K+  +  A   F S+      PN +TY+I+I GLC   + +KA   + +M++    P+
Sbjct: 484 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 543

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            IT+  +I G  +     + + L  + K    +PD++  + +++ L
Sbjct: 544 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 589



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 258/529 (48%), Gaps = 12/529 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-----ATGLFPNLYTYNIL 102
           +EA+ + +   +   S P V ++N +L  L K +  +  L           PN+ TYNIL
Sbjct: 107 DEAYGLLERQ-KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNIL 165

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C+ G+++        + R+   PN  T N +I  L    ++ EA ++F  +    C
Sbjct: 166 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC 225

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T+++LI+GL + G    A +L+E+M +  G +     P  + Y+++I    K G 
Sbjct: 226 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD-CGHV-----PGAIVYTSLIRSFFKCGR 279

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            +    ++ +M     +PD+   N+ +  +  A +  + + LF E+   G  P   ++++
Sbjct: 280 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 339

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  L K    +E   L   M ++G   +   YN ++DGFC  GK+N+A +L   M+  G
Sbjct: 340 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 399

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
                V+Y  +I+G  K   ++EA  L+ E  S GIK  VV Y++L  G  ++ +++ A 
Sbjct: 400 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY 459

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            + +E+ + G+  +  T+   +D L K   I EA+  F++++ LKC  +   Y+ LI+GL
Sbjct: 460 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 519

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+  +   A+  +  +    L PN +TY  MI GL   G + +A  LF   + N   PD 
Sbjct: 520 CRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDS 579

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +++ +I G    N+      L  + + K          +++D L K E
Sbjct: 580 ASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAE 628



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 243/521 (46%), Gaps = 27/521 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
           EAF I   M R     P  S++ IL+           ++    LFP +          CK
Sbjct: 28  EAFDIIQTM-RKFKFRPAFSAYTILIG----------KVGLMLLFPWV---------LCK 67

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
             R+      F ++ ++   P A  +N++I G  +  +  EA  L  + KA G  P+VI 
Sbjct: 68  ANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIA 127

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN ++  L +      AL +FEEM            PN  TY+ +ID LC+EG ++ A  
Sbjct: 128 YNCILTCLGKKRRVEEALRIFEEMKRD-------AVPNVPTYNILIDMLCREGKLNAALE 180

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +   M+   + P+V+T N +I  LC A    EA  +F  M D+   P+ VTF+ ++D L 
Sbjct: 181 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 240

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           K  ++D+A  L + M+  G  P A  Y +L+  F   G+     +++  M   GC  D  
Sbjct: 241 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 300

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
             N  ++   K  E E+  +L+RE+ + G  P   +Y+ L  GL +        +LF  M
Sbjct: 301 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 360

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +  G   DT  Y   IDG CK+G + +A +L   +++      +  Y  +IDGL K  RL
Sbjct: 361 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 420

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+ LF       +  NVV Y+ +I G    G++D+A  +  ++ +    P+V T++ L
Sbjct: 421 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 480

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +   ++  E ++       MK+ K  P+    SI+++ L +
Sbjct: 481 LDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCR 521



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 13/256 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           N+A+ + + M ++   PP V ++  ++  LAK    D          + G+  N+  Y+ 
Sbjct: 386 NKAYQLLEEM-KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 444

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ F K+GR+   ++    +++   TPN  T+N L+  L     I EA   F  +K   
Sbjct: 445 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 504

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN ITY+ LINGLCR      A   ++EM     ++G+  KPNT+TY+T+I GL K G
Sbjct: 505 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTITYTTMISGLAKAG 558

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A  LF + K     PD  +YN++I GL  AN   +A  LF E   +G      T  
Sbjct: 559 NILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCV 618

Query: 282 VIMDELCKNRKMDEAS 297
           V++D L K   +++A+
Sbjct: 619 VLLDALHKAECLEQAA 634



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 143/301 (47%), Gaps = 1/301 (0%)

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LCK  ++DEA  L + + Q    P A  YNT++ G+   GK + A  L    ++ G    
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            ++YN ++    K + VEEAL ++ EM    + P V TYN L   L    ++  AL++ D
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M+R G+  +  T    ID LCK   + EA  +F  +    C  +   ++ LIDGL K G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           R+  A+ L+  +     VP  + Y  +I+     G+ +    ++ +M     +PD+   +
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
             +    +  E  K   L  ++     +PDA   SI++  LVK  ++ ++   F   + Q
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363

Query: 587 G 587
           G
Sbjct: 364 G 364



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 11/291 (3%)

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM----------GKINRAEELFGSM 338
           K+RK+ EA  ++  M +   RP    Y  L+    LM           +++ A ELF  +
Sbjct: 22  KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           E         +YN +I GY    + +EA  L     +KG  P+V+ YN +   L +  +V
Sbjct: 82  EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E AL++F+EM+RD V  +  TY   ID LC+ G +  A+E+   +       ++   N +
Sbjct: 142 EEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           ID LCK+ +L+ A  +F  +   V  PN VT++ +I GL   G++D A  L+  M +   
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 260

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            P  I +  LI  F +       +++  +M      PD ++++  +D + K
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFK 311



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 11/172 (6%)

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG------ 461
           M   G    +      +    K+  + EA ++ +T+R  K      AY  LI        
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 462 ----LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
               LCK+ RL  A ELF  L     VP    YN MI G  + G+ D+A  L    +   
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + P VI ++ ++    +     +   +  +MK   V P+    +I++D+L +
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCR 171


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 259/526 (49%), Gaps = 14/526 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F+  L  +   P   ++N ++        +D       R  A G  P++  YN 
Sbjct: 317 DEAVELFE-QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 375

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++ C  K  RV      F  + R    PN  T+N LI  L  E ++  A  +   ++  G
Sbjct: 376 ILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAG 434

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV+T N +I+ LC+      A ++FE M +       VC PN VT+S++IDGL K G
Sbjct: 435 LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK------VCTPNAVTFSSLIDGLGKCG 488

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A +L+ +M D    P  + Y SLI          +  +++ EM+  G  P +   N
Sbjct: 489 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 548

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             MD + K  + ++   L   +   G  P+A +Y+ L+ G    G  N   ELF +M+  
Sbjct: 549 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D  +YN +I+G+CK+ +V +A  L  EM  KG  PTVVTY ++  GL +I +++ A
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF+E + +G+  +   Y++ IDG  K G I EA  +   L       ++  +NCL+D 
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L K+  +  A   F S+      PN +TY+I+I GLC   + +KA   + +M++    P+
Sbjct: 729 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 788

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            IT+  +I G  +     + + L  + K    +PD++  + +++ L
Sbjct: 789 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 834



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/557 (29%), Positives = 268/557 (48%), Gaps = 20/557 (3%)

Query: 21  FRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN 80
           FR  FS+  +    L+       V  P+    +F  M  +      V  F  L+   A+ 
Sbjct: 191 FRPAFSAYTILIGALS------EVREPDPMLILFHQMQELG-YEVNVHLFTTLIRVFARE 243

Query: 81  KHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
              D  L+      +  L  ++  YN+ I+CF K G+V + +  F  +      P+  T+
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
            S+I  L   +R+ EA  LF +L+     P    YNT+I G    G    A  L E    
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ-K 362

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
             G I     P+ + Y+ I+  L K+  V++A  +F +MK + + P+V TYN LI  LC 
Sbjct: 363 AKGSI-----PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCR 416

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
               N A  +  +M   G+ P+V+T N+++D LCK +K++EA  + + M  +   PNA T
Sbjct: 417 EGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVT 476

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           +++L+DG    G+++ A  L+  M   G     + Y  LI  + K    E+   +Y+EMV
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
             G  P +   NT    +F+  + E    LF E+   G   D R+Y+  I GL K G   
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 596

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           E  ELF  ++   C LD  AYN +IDG CKSG++  A++L   +      P VVTY  +I
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 656

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GL    ++D+A  LF + + N    +V+ +  LI GF ++    +   ++ ++ +K + 
Sbjct: 657 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 716

Query: 555 PDASIVSIVVDLLVKNE 571
           P+    + ++D LVK E
Sbjct: 717 PNVYTWNCLLDALVKAE 733



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 258/529 (48%), Gaps = 12/529 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-----ATGLFPNLYTYNIL 102
           +EA+ + +   +   S P V ++N +L  L K +  +  L           PN+ TYNIL
Sbjct: 352 DEAYGLLERQ-KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNIL 410

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C+ G+++        + R+   PN  T N +I  L    ++ EA ++F  +    C
Sbjct: 411 IDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC 470

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN +T+++LI+GL + G    A +L+E+M +     G V  P  + Y+++I    K G 
Sbjct: 471 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD----CGHV--PGAIVYTSLIRSFFKCGR 524

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            +    ++ +M     +PD+   N+ +  +  A +  + + LF E+   G  P   ++++
Sbjct: 525 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 584

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  L K    +E   L   M ++G   +   YN ++DGFC  GK+N+A +L   M+  G
Sbjct: 585 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 644

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
                V+Y  +I+G  K   ++EA  L+ E  S GIK  VV Y++L  G  ++ +++ A 
Sbjct: 645 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY 704

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            + +E+ + G+  +  T+   +D L K   I EA+  F++++ LKC  +   Y+ LI+GL
Sbjct: 705 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 764

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+  +   A+  +  +    L PN +TY  MI GL   G + +A  LF   + N   PD 
Sbjct: 765 CRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDS 824

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +++ +I G    N+      L  + + K          +++D L K E
Sbjct: 825 ASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAE 873



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 234/483 (48%), Gaps = 7/483 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + GL P+  TY  +I   CK  R+      F ++ ++   P A  +N++I G  +  +
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGK 350

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA  L  + KA G  P+VI YN ++  L +      AL +FEEM            PN
Sbjct: 351 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD-------AVPN 403

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ +ID LC+EG ++ A  +   M+   + P+V+T N +I  LC A    EA  +F 
Sbjct: 404 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M D+   P+ VTF+ ++D L K  ++D+A  L + M+  G  P A  Y +L+  F   G
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +     +++  M   GC  D    N  ++   K  E E+  +L+RE+ + G  P   +Y+
Sbjct: 524 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYS 583

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GL +        +LF  M+  G   DT  Y   IDG CK+G + +A +L   +++ 
Sbjct: 584 ILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK 643

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
                +  Y  +IDGL K  RL  A+ LF       +  NVV Y+ +I G    G++D+A
Sbjct: 644 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 703

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +  ++ +    P+V T++ L+   ++  E ++       MK+ K  P+    SI+++ 
Sbjct: 704 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILING 763

Query: 567 LVK 569
           L +
Sbjct: 764 LCR 766



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 211/463 (45%), Gaps = 7/463 (1%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           S F P++     L+       ++ EA  +   ++ F   P    Y  LI  L        
Sbjct: 154 SGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDP 213

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
            L LF +M     E+      N   ++T+I    +EG VD A +L  +MK  +++ D+V 
Sbjct: 214 MLILFHQMQELGYEV------NVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVL 267

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN  I     A   + + + F EM   G+ P  VT+  ++  LCK  ++DEA  L + + 
Sbjct: 268 YNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLE 327

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           Q    P A  YNT++ G+   GK + A  L    ++ G     ++YN ++    K + VE
Sbjct: 328 QNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVE 387

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EAL ++ EM    + P V TYN L   L    ++  AL++ D+M+R G+  +  T    I
Sbjct: 388 EALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMI 446

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D LCK   + EA  +F  +    C  +   ++ LIDGL K GR+  A+ L+  +     V
Sbjct: 447 DRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV 506

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P  + Y  +I+     G+ +    ++ +M     +PD+   +  +    +  E  K   L
Sbjct: 507 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL 566

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             ++     +PDA   SI++  LVK  ++ ++   F   + QG
Sbjct: 567 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 13/256 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           N+A+ + + M ++   PP V ++  ++  LAK    D          + G+  N+  Y+ 
Sbjct: 631 NKAYQLLEEM-KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 689

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ F K+GR+   ++    +++   TPN  T+N L+  L     I EA   F  +K   
Sbjct: 690 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 749

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN ITY+ LINGLCR      A   ++EM     ++G+  KPNT+TY+T+I GL K G
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTITYTTMISGLAKAG 803

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A  LF + K     PD  +YN++I GL  AN   +A  LF E   +G      T  
Sbjct: 804 NILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCV 863

Query: 282 VIMDELCKNRKMDEAS 297
           V++D L K   +++A+
Sbjct: 864 VLLDALHKAECLEQAA 879



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 161/361 (44%), Gaps = 36/361 (9%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            YNSL+  +    +++  +R+  EM   G  PS      ++    K+RK+ EA  ++  M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +   RP    Y  L+     + + +    LF  M+ +G + +   +  LI  + +   V
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + ALSL  EM S  +   +V YN       +  +V+ + K F EM+  G+  D  TYT+ 
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 424 IDGLCKNGYIIEAVELFRTL---RILKCEL------------------------------ 450
           I  LCK   + EAVELF  L   R + C                                
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 451 --DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
              + AYNC++  L K  R++ A  +F  +     VPNV TYNI+I  LC +G+++ A +
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALE 425

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +  DME     P+V+T +++I    +  +  +   +   M +K   P+A   S ++D L 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 569 K 569
           K
Sbjct: 486 K 486



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 6/277 (2%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI---LINGYCKNKEVEEALSLY 370
            YN+L+    +M +    + L   +E M       S NI   L+    K++++ EA  + 
Sbjct: 127 AYNSLL---MVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDII 183

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           + M     +P    Y  L   L E+ + +  L LF +MQ  G   +   +TT I    + 
Sbjct: 184 QTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G +  A+ L   ++    + DI  YN  ID   K+G++  +W+ F  +    L+P+ VTY
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             MI  LC   ++D+A +LF  +E+N   P    ++ +I G+    +  +   LL + K 
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 363

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           K  +P     + ++  L K     ++L  F   +R  
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 400


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 251/535 (46%), Gaps = 20/535 (3%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFC 107
           F  ML+   +PP   ++N L+ +  K            R+   GL P+ +TYN L+   C
Sbjct: 78  FGAMLK-SGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLC 136

Query: 108 KIGRVSLG---FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           + G ++     F+   R   +C+  +  ++  LIKGL A  RI +A  +F K+    C P
Sbjct: 137 RAGLLAAACGLFVQMPRRWGACY--DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
            V TY  L++GLC+      A  L  EM N     GVV  PN VTY+ +I GLC+EG  D
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNK----GVV--PNVVTYNALIGGLCQEGRFD 248

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
               L  +M+ +  +PD  TY  ++HGLC         ++  E + +GV   V+T+N ++
Sbjct: 249 DVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALI 308

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           +  CK   M  A  +L LM +  V P   T+N ++ GFC  GK+++A      M   G  
Sbjct: 309 NGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLS 368

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + V++N LI+G C   E + AL L   M   G+ P   TY      L +  Q+E A  L
Sbjct: 369 PNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSL 428

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F  +   G+ A    YT+ + G C+ G I  A  L   +    C  D+  YN LIDGLCK
Sbjct: 429 FSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCK 488

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
             RL  A +L   +    + P   T+NI+I+ +  D +   A  ++  M  +   PD  T
Sbjct: 489 VKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQT 548

Query: 525 FDMLIH--GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           + + I    F    +   ++  + +M E  V PD    + ++   V   +  K+ 
Sbjct: 549 YTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAF 603



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 252/512 (49%), Gaps = 17/512 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLN----------ATGLFPNLYTYNILINCFCKIGRVS 113
           P  V S N  L + +       RL            +G  PN  TYN LIN  CK+  ++
Sbjct: 48  PSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTL 172
               A  R+  +   P+  T+N L+ GL     +  A  LF ++ + +G   +  +Y  L
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I GLC  G    A  +F +M+ G       C+P   TY+ ++DGLCK   V +A+AL  +
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRG------WCRPGVHTYTVLLDGLCKVRRVGEAEALLGE 221

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M ++ + P+VVTYN+LI GLC    +++  +L  +M  Q   P   T+  ++  LCK+ K
Sbjct: 222 MVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGK 281

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +   +++L   + +GV     TYN L++G+C  G +  A ++   M+         ++N 
Sbjct: 282 VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNE 341

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I+G+C   +V +A++   +M   G+ P  VT+N+L  G   + + + AL+L D M+  G
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  D +TY  FID LC  G + EA  LF  L +   +     Y  L+ G C+ G +  A+
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L   +     +P+V TYN +I GLC   ++D+A DL   M++    P   TF++LI   
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +   + +   ++  +M      PD    ++ +
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKI 553



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 211/441 (47%), Gaps = 8/441 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           NAA      +G  A  R+    A F  +   G  PN  TYNTLIN  C+      A    
Sbjct: 55  NAALIAYSSRGSRA-PRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAAL 113

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSL 248
             M     E G+   P+T TY+ ++ GLC+ G +  A  LF+QM +      D  +Y  L
Sbjct: 114 VRMR----EAGLA--PDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I GLC A   ++A R+F +M     +P V T+ V++D LCK R++ EA  LL  MV +GV
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            PN  TYN L+ G C  G+ +   +L   ME      D  +Y  +++G CK+ +V     
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAK 287

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +  E + KG+   V+TYN L  G  +   ++ AL +   M+R+ V    +T+   I G C
Sbjct: 288 VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFC 347

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
             G + +A+     +       +   +N LI G C  G  K A  L   +    ++P+  
Sbjct: 348 CGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQ 407

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY I I  LC++GQ+++A  LF  +         + +  L+HG+ ++ +      L+ KM
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM 467

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
             +  MPD    + ++D L K
Sbjct: 468 ASENCMPDVHTYNTLIDGLCK 488



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 236/535 (44%), Gaps = 69/535 (12%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+   + TYN LIN +CK G +         + R+   P   TFN +I G     ++ +A
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            A  T++   G  PN +T+N+LI+G C  G   IAL L + M     E GV+  P+  TY
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLME----EYGVL--PDRQTY 409

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +  ID LC EG +++A +LF  +  + I    V Y SL+HG C   D + A  L  +M  
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +   P V T+N ++D LCK +++D A  LLD M ++G+ P  CT+N L+       K   
Sbjct: 470 ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHAD 529

Query: 331 AEELFGSMESMGCKHDDVSYNILIN-----GYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           A +++  M S GCK D  +Y + I+     G  K + ++ A+    EM   G+ P V TY
Sbjct: 530 AAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETY 586

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK--------NGYIIEAV 437
           N +     +    E A     +M    +  D  TY+  ++ +C         N  I + V
Sbjct: 587 NAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMV 646

Query: 438 ELFRTLRIL---KCELD----IQAYNCLIDGLCKSGRL---------------------- 468
           ++ R L+ L    CE D    I  Y  L+ GLC   RL                      
Sbjct: 647 DV-RNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMS 705

Query: 469 -------------KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
                        + A E F S+ H    P + +  +++ GLC+ G    A  +F DM  
Sbjct: 706 DYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLG 765

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD----ASIVSIVVDL 566
                D + + +LI             E+L  M  KK +      AS+V +V +L
Sbjct: 766 LGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAEL 820



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 156/356 (43%), Gaps = 24/356 (6%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++ +    P+++TYN LI+  CK+ R+        ++ +    P   TFN LIK +  + 
Sbjct: 466 KMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDK 525

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM---IALNLFEEMANGNGEIGVV 202
           +  +AA ++ ++ + GC+P+  TY   I+     G T    I + + E       E GV 
Sbjct: 526 KHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMH-----EAGVF 580

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND----- 257
             P+  TY+ II      G  +KA    ++M    I+PD  TY+ L++ +C+ +D     
Sbjct: 581 --PDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFD 638

Query: 258 ----WN-----EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
               W        + LF +M +    P + T+  ++  LC   +++E   LL  M    +
Sbjct: 639 NEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI 698

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
             +    + L+  +C +     A E F SM     +    S  +L++G C + +   A+S
Sbjct: 699 LLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVS 758

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           ++ +M+  G     V +  L   L E       L++   M      A TRTY + +
Sbjct: 759 IFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 1/205 (0%)

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           L+ +  M+  G  P   TYNTL     ++  +  A      M+  G+A DT TY   + G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 427 LCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           LC+ G +  A  LF  + R      D  +Y  LI GLC +GR+  A  +F  +  G   P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            V TY +++ GLC   ++ +A  L  +M      P+V+T++ LI G  +      V +LL
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKN 570
            KM+ ++  PD    + VV  L K+
Sbjct: 255 EKMEIQRHSPDCWTYTQVVHGLCKH 279


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 235/498 (47%), Gaps = 23/498 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN++TYN L+  FC  G+V        ++      P+A T+N LI+G   +  I  A
Sbjct: 354 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 413

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   ++  G   +  TYN LIN LC+ G T  A +LF+ +           KPN VT+
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG------IKPNAVTF 467

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +++I+GLCK G  D A     +M      PD  TY+S I  LC      E      EM+ 
Sbjct: 468 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 527

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + V+PS V + +++ +L K R     +R    MV  G  P+  TY T M  +C+ G++N 
Sbjct: 528 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE +   M   G   D ++YN L++G+    + + A+S+ ++M S    P   TY  L  
Sbjct: 588 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647

Query: 391 GLFEIHQVEHALKL-----------------FDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            L  +  VE  L L                 FD M+++    ++ TY++ ++G  ++G  
Sbjct: 648 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 707

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  L   ++     L+   Y  L+   CKS R   AW L CS+     +P +++Y  +
Sbjct: 708 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 767

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           + GL  +GQ DKA+++F++      +PD I + ++I G I+        E++  ++    
Sbjct: 768 LSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNC 827

Query: 554 MPDASIVSIVVDLLVKNE 571
            P     +++ + L   E
Sbjct: 828 RPSHQTYAMLTEELPDRE 845



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 264/573 (46%), Gaps = 64/573 (11%)

Query: 57  MLRMHP-SPPPVSS-----FNILLASLAKNKHYDTRLNATGLF----------PNLYTYN 100
           +LR+H  SPPP+       F  LLA L++   +     A  LF          P   TYN
Sbjct: 101 VLRLHSLSPPPLRPLFDRPFASLLAHLSR---FALAPLALRLFAHMHRHAPPAPTAPTYN 157

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +I   C+   ++        ++RS + P+A TFNSLI G    +++  A  LF K+   
Sbjct: 158 AVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR 217

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   +V++Y TLI GLC  G    A+ LF EM           +P+   Y+ ++ GLC  
Sbjct: 218 GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----------QPDMHMYAALVKGLCNA 267

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              ++   +  +MK+    P    Y +++   C      EA+ +  EM ++G+ P VVT 
Sbjct: 268 ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTC 327

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             +++  CK  +M +A R+L+LM  RG +PN  TYN L+ GFC  GK+++A  L   M +
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   D V+YN+LI G C +  +E A  L R M   G+     TYN L   L +  + + 
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 447

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  LFD ++  G+  +  T+ + I+GLCK+G    A +    +    C  D   Y+  I+
Sbjct: 448 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 507

Query: 461 GLCK----SGRLKFAWEL-----------FCSLPHGVLV--------------------P 485
            LCK       L F  E+           +  + H +L                     P
Sbjct: 508 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 567

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +VVTY   ++  C +G++++A ++ ++M +N    D + ++ L+ G   I +      +L
Sbjct: 568 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 627

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            +M     +P+     I++  LV+  +    LP
Sbjct: 628 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 660



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 169/647 (26%), Positives = 265/647 (40%), Gaps = 93/647 (14%)

Query: 9   RSFSFASAPISA-FRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           R  S +  P+   F   F+SLL H             + P  A  +F +M R  P  P  
Sbjct: 103 RLHSLSPPPLRPLFDRPFASLLAHLSRF--------ALAP-LALRLFAHMHRHAPPAPTA 153

Query: 68  SSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL------- 114
            ++N ++      A LA+   Y + +  +G  P+ YT+N LI  +C+  +V +       
Sbjct: 154 PTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDK 213

Query: 115 ------------------GFIAFGRILRSCF------TPNAATFNSLIKGLHAESRIMEA 150
                             G    GRI  +         P+   + +L+KGL    R  E 
Sbjct: 214 MPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEG 273

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV-------- 202
             +  ++K  G  P+   Y  +++  CR      A  + +EM        VV        
Sbjct: 274 LLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINA 333

Query: 203 ---------------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                                CKPN  TY+ ++ G C EG V KA  L  +M+   +NPD
Sbjct: 334 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPD 393

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTYN LI G C       A RL   M   G+     T+N +++ LCK+ + D+A  L D
Sbjct: 394 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 453

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            +  RG++PNA T+N+L++G C  GK + A +    M S GC  D  +Y+  I   CK K
Sbjct: 454 SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 513

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
             +E LS   EM+ K +KP+ V Y  +   L +        + + EM   G   D  TYT
Sbjct: 514 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 573

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T +   C  G + EA  +   +      +D  AYN L+DG    G+   A  +   +   
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 633

Query: 482 VLVPNVVTYNIMIQ-----------------GLCNDGQMDKARDLFLDMEENAAAPDVIT 524
             VPN  TY I+++                 G+    ++     LF  M++N   P+  T
Sbjct: 634 ASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGT 693

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +  ++ GF       +   L+  MKE  +  +  I + +V    K++
Sbjct: 694 YSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 740



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 208/459 (45%), Gaps = 22/459 (4%)

Query: 145 SRIMEAAALFTKLKAFGCEPNVI------TYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           SR + A AL   L+     P  +       + +L+  L R     +AL LF  M      
Sbjct: 90  SRHLLAVALPVVLRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPP 149

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                 P   TY+ +I  LC+   + +A      M      PD  T+NSLI G C  N  
Sbjct: 150 -----APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 204

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           + A+ LF +M  +G    VV++  +++ LC+  ++DEA  L   M Q    P+   Y  L
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAAL 260

Query: 319 MDGFCLMGKINRAEE---LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           + G C      R EE   +   M+ +G +    +Y  +++  C+ ++ +EA  + +EM  
Sbjct: 261 VKGLC---NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFE 317

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KG+ P VVT   +     +  ++  AL++ + M+  G   +  TY   + G C  G + +
Sbjct: 318 KGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHK 377

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+ L   +R      D   YN LI G C  G ++ A+ L   +    L+ +  TYN +I 
Sbjct: 378 AMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALIN 437

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            LC DG+ D+A  LF  +E     P+ +TF+ LI+G  +  +     + L KM      P
Sbjct: 438 ALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTP 497

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           D    S  ++ L K + S + L SF+ +  Q +V  S V
Sbjct: 498 DTYTYSSFIEHLCKMKGSQEGL-SFIGEMLQKDVKPSTV 535


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/443 (33%), Positives = 227/443 (51%), Gaps = 51/443 (11%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK--------HYDTRLNATGLFPNLYTYN 100
           +A  +FD +LR     P + S N  LA +A++         +   R  A+ + P ++TY 
Sbjct: 36  DALDVFDELLRRGIGAP-IRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYG 94

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKA 159
           ILI C C  GR+ LGF A G +++  F      FN L+KGL A+ R  +A  +  + +  
Sbjct: 95  ILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTE 154

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
             C PNV ++  ++ GLC    +  AL L   MA+  G     C PN V+YST+IDGL K
Sbjct: 155 LSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGG----CLPNVVSYSTVIDGLLK 210

Query: 220 EGFVDKAKALFLQMKDENINPDVV-----------------------------------T 244
            G  DKA A + +M D  I P+VV                                   T
Sbjct: 211 GGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFT 270

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y SL+HG C +    EA +   +M   GV+P+VVT++  MD LCKN +  EA ++ D MV
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMV 330

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RG++P+  TY++L+ G+ + G +     LF  M     + D   +N LI    K  +V+
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+ ++ +M  +G+KP  VTY+TL  G  +I ++E+AL LF EM  +GV+ +  TY   +
Sbjct: 391 EAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIML 450

Query: 425 DGLCKNGYIIEAVELFRTLRILK 447
            GL + G    A E +  ++I+K
Sbjct: 451 QGLFRTGRTATAKEFY--VQIIK 471



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 38/353 (10%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P V TY  LI   C A   +        ++ +G +   + FN ++  LC +++ D+A 
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 298 RL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM--ESMGCKHDDVSYNILI 354
            + L  M +    PN  ++  ++ G C   +   A EL   M  +  GC  + VSY+ +I
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVI 205

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +G  K  + ++A + YREM+ + I P VV Y+++   L +   ++ A+++ D M ++GV 
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  TYT+                                   L+ G C SG+L  A + 
Sbjct: 266 PNCFTYTS-----------------------------------LVHGFCSSGQLTEAIKF 290

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              +    + PNVVTY+  +  LC +G+  +AR +F  M +    PD+ T+  L+HG+  
Sbjct: 291 LEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAI 350

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
                +++ L   M +  + PD  + + ++    K     +++  F    +QG
Sbjct: 351 EGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQG 403


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 260/504 (51%), Gaps = 27/504 (5%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL-------HA 143
           G+FP++ T+N L++  CK G +  G     ++L++   PN  TFN  I+GL        A
Sbjct: 211 GIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGA 270

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
            S+++EA     K+   G EP+  TYNT+I G  + G    A  + ++ A   G +    
Sbjct: 271 NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD-AKFKGFV---- 325

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+  TY ++I G+C++G +D A ALF +   + + P +V YN+LI GL       +A +
Sbjct: 326 -PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQ 384

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  +M  +G+ P + T+N++++ LCK   + +A+ LL+  + +G  P+  T+NTL+DG+C
Sbjct: 385 LMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYC 444

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              K++ A  +  SM S G   D ++YN ++NG CK  + E+ +  ++ ++ KG  P ++
Sbjct: 445 KRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNII 504

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN L   L +  +V  AL L +E++  G+  D  ++ T I G C NG + EA +LFR +
Sbjct: 505 TYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM 564

Query: 444 -RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
            +  +    +  YN +I+   +   +  A +LF  +      P+  TY +MI G C  G 
Sbjct: 565 EQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGN 624

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV-- 560
           ++   D  L   E    P + TF  +I+     +   +   ++H M    V+P+A +   
Sbjct: 625 VNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIF 684

Query: 561 -----------SIVVDLLVKNEIS 573
                       IV DLL K+ I+
Sbjct: 685 DADKKAVAAPKIIVEDLLKKSHIT 708



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 245/482 (50%), Gaps = 60/482 (12%)

Query: 135 NSLIKGLHAES--------RIMEAAALFTKLKAFGCEPNVITYNTLIN------------ 174
           NSL++G++  +        ++ EA  +F ++  + CEP++ +YN ++N            
Sbjct: 72  NSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAH 131

Query: 175 -----------------------GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                                    CRT   + AL L   M +        C+ N V Y 
Sbjct: 132 KVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQG------CELNAVVYC 185

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I G  +E +  +A  LF +M    I P + T+N L+H LC      E ++L  +++  
Sbjct: 186 TVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKN 245

Query: 272 GVQPSVVTFNVIMDELCK-------NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           GV P++ TFN+ +  LC+       N K+ EA   L  MV +G+ P+  TYNT++ G+  
Sbjct: 246 GVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK 305

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +GKI  A  +    +  G   D+ +Y  LI G C++ +++ AL+L+ E + KG+KP++V 
Sbjct: 306 VGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVL 365

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNTL  GL +   V  AL+L ++M ++G++ D  TY   I+GLCK G + +A  L     
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA-A 424

Query: 445 ILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQ 502
           I K  L DI  +N LIDG CK  ++  A  +  S+  HGV  P+V+TYN ++ GLC   +
Sbjct: 425 IAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGV-TPDVITYNSILNGLCKAAK 483

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            +   + F  + E    P++IT+++LI    +  + ++  +LL +++ + ++PD      
Sbjct: 484 PEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGT 543

Query: 563 VV 564
           V+
Sbjct: 544 VI 545



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 249/509 (48%), Gaps = 37/509 (7%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++++YN ++N   + G  +     + R+      P+  TF   IK      R + A  L
Sbjct: 109 PSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRL 168

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHT---------MIALNLFEEMANGNGEIGVVCK 204
              + + GCE N + Y T+I+G     +          M+ L +F  +A  N  + ++CK
Sbjct: 169 LNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228

Query: 205 --------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQ-------MKDEN 237
                               PN  T++  I GLC++G ++ A +  ++       M ++ 
Sbjct: 229 KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PD  TYN++I+G        +A R+  +   +G  P   T+  ++  +C++  +D A 
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHAL 348

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L +  + +G++P+   YNTL+ G    G + +A +L   M   G   D  +YN++ING 
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK   V +A +L    ++KG  P + T+NTL  G  +  ++++A+ + D M   GV  D 
Sbjct: 409 CKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDV 468

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY + ++GLCK     + +E F+ +    C  +I  YN LI+ LCK+ ++  A +L   
Sbjct: 469 ITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEE 528

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN-AAAPDVITFDMLIHGFIRIN 536
           + +  L+P+ V++  +I G CN+G +D+A  LF  ME+       V T++++I+ F    
Sbjct: 529 IRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKL 588

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +     +L H+M +K   PD+    +++D
Sbjct: 589 DMDMAQKLFHEMGDKGCDPDSYTYRVMID 617



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 193/385 (50%), Gaps = 28/385 (7%)

Query: 65  PPVSSFNILLASLAKN-------------KHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           P + +FNI +  L +              ++Y  ++   GL P+ +TYN +I  + K+G+
Sbjct: 249 PNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGK 308

Query: 112 VSLGFIAFGRILRSC----FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           +        RIL+      F P+  T+ SLI G+  +  I  A ALF +    G +P+++
Sbjct: 309 IQDA----SRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIV 364

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
            YNTLI GL + G  + AL L  +M+           P+  TY+ +I+GLCK G V  A 
Sbjct: 365 LYNTLIKGLSQQGLVLKALQLMNDMSKEG------MSPDIWTYNLVINGLCKMGCVSDAN 418

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L      +   PD+ T+N+LI G C     + A  +   M   GV P V+T+N I++ L
Sbjct: 419 NLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGL 478

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK  K ++      +++++G  PN  TYN L++  C   K+  A +L   + + G   D 
Sbjct: 479 CKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDP 538

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           VS+  +I+G+C N +++EA  L+R M  +  I  TV TYN +     E   ++ A KLF 
Sbjct: 539 VSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFH 598

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNG 431
           EM   G   D+ TY   IDG CK G
Sbjct: 599 EMGDKGCDPDSYTYRVMIDGFCKVG 623



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 163/327 (49%), Gaps = 13/327 (3%)

Query: 65  PPVSSFNILLASLA------KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N L+  L+      K       ++  G+ P+++TYN++IN  CK+G VS     
Sbjct: 361 PSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL 420

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               +   + P+  TFN+LI G     ++  A  +   + + G  P+VITYN+++NGLC+
Sbjct: 421 LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK 480

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                  +  F+ +          C PN +TY+ +I+ LCK   V +A  L  ++++  +
Sbjct: 481 AAKPEDVMETFKMIMEKG------CLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEAS 297
            PD V++ ++I G C+  D +EA +LF  M  Q  +  +V T+N++++   +   MD A 
Sbjct: 535 IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQ 594

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L   M  +G  P++ TY  ++DGFC +G +N   +       +G      ++  +IN  
Sbjct: 595 KLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVT 384
           C    V EA+ +   MV  G+ P  V 
Sbjct: 655 CVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 193/425 (45%), Gaps = 50/425 (11%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV- 243
           AL++F  +   +G      K   +TY  +I+ L   G  D  + + ++M+  N++  ++ 
Sbjct: 23  ALSIFNSVKKEDG-----FKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR-LNVDNSLLE 76

Query: 244 -TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             Y S +          EA  +F  M     +PS+ ++N IM+ L +    ++A ++   
Sbjct: 77  GVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLR 136

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G+ P+ CT+   +  FC   +   A  L  +M S GC+ + V Y  +I+G+ +   
Sbjct: 137 MKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENY 196

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
             EA  L+ +M+  GI P + T+N L   L +   ++   KL +++ ++GV  +  T+  
Sbjct: 197 QVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNI 256

Query: 423 FIDGLCKNGY-------IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL- 474
           FI GLC+ G        ++EA      +     E D   YN +I G  K G+++ A  + 
Sbjct: 257 FIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRIL 316

Query: 475 --------------FCSLPHGV--------------------LVPNVVTYNIMIQGLCND 500
                         +CSL  GV                    L P++V YN +I+GL   
Sbjct: 317 KDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQ 376

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G + KA  L  DM +   +PD+ T++++I+G  ++   S  N LL+    K  +PD    
Sbjct: 377 GLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTF 436

Query: 561 SIVVD 565
           + ++D
Sbjct: 437 NTLID 441



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 14/218 (6%)

Query: 360 NKEVEEALSLYREMVSK-GIKPTVVTYNTL-----FLGLFE-IHQVEHALKL-FDEMQRD 411
            K+  +ALS++  +  + G K T +TY  +     F G F+ + +V   ++L  D    +
Sbjct: 17  QKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLE 76

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV      Y + +    + G + EAV++F  +    CE  I +YN +++ L + G    A
Sbjct: 77  GV------YVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQA 130

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +++  + H  + P+V T+ I I+  C   +   A  L  +M       + + +  +I G
Sbjct: 131 HKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISG 190

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F   N   +  EL +KM    + P  +  + ++ +L K
Sbjct: 191 FYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/269 (18%), Positives = 102/269 (37%), Gaps = 36/269 (13%)

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME-SMGCKHDDVSYNILINGYCKNKEV 363
           + G +    TY  +++     G+ +  E +   M  ++     +  Y   +  Y +  +V
Sbjct: 33  EDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKGKV 92

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA+ ++  M     +P++ +YN +   L E      A K++  M+ +G+A         
Sbjct: 93  QEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAP-------- 144

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
                                      D+  +   I   C++ R   A  L  ++P    
Sbjct: 145 ---------------------------DVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGC 177

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             N V Y  +I G   +    +A +LF  M      P + TF+ L+H   +     +  +
Sbjct: 178 ELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEK 237

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           LL+K+ +  V P+    +I +  L +  +
Sbjct: 238 LLNKVLKNGVCPNLFTFNIFIQGLCRKGV 266


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 164/541 (30%), Positives = 263/541 (48%), Gaps = 47/541 (8%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNA 131
           L   +   K + T L   GL P+ Y Y   +  +C+ G ++     F  + LR C    A
Sbjct: 84  LAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TA 142

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGC----------------------------- 162
            T+ +L+ GL     + EA A+F  ++A  C                             
Sbjct: 143 FTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202

Query: 163 ------EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
                 EPN++ YN LI+G C  G    AL +FE M +GN      C PN  TY+ +I G
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHG 256

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK G V++A  LF +M +  + P+VVTY +LI G C+      A RL   M   G+ P+
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
             TF+V++D LCK  K++EA   L  +V++GV+ N   Y +L+DG C  GKI+ A+EL  
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M S G   D  SY+ LI+G C+ K++ +A  +  +M+ KGI+ + VTY  +   L    
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             E   K+FD+M   G+  D  TYT F+   C+ G + +A  +   +       ++  YN
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--LDME 514
            LI G    G +  A+  F  +      PN  +Y ++++ +      D + D++   DM+
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556

Query: 515 E-NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-DLLVKNEI 572
           +   +  D I + +LI+G ++    ++ + LL  MKE    P  +I +++  ++ V NE+
Sbjct: 557 DLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEV 616

Query: 573 S 573
            
Sbjct: 617 Q 617



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 260/531 (48%), Gaps = 9/531 (1%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFP--NLYTYNILINCFCKIGRVSLGFIAFGRI 122
           PP+   N LL +LA+++ +    +     P  NL TY  LIN +C  G +         +
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSL 98

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L +   P++  + S + G      +  A  +F  +   GC     TY  L++GL   G  
Sbjct: 99  LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMV 158

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+ +F  M   +      C P+T  Y+T++ GLC+ G  ++A+ L  +       P++
Sbjct: 159 REAMAVFVGMRADS------CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN+LI G C+A +   A ++F  M      P+V T+  ++  LCK+ K++ A  L   
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV+ G+ PN  TY  L+ G C  G +  A  L   ME+ G   +D ++++LI+  CK ++
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           VEEA      +V KG+K   V Y +L  GL +  +++ A +L  +M  +G   D  +Y++
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDGLC+   + +A  +   +     +     Y  +ID L +    +   ++F  +    
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P++VTY + ++  C +G+M+ A  + + M +    P+++T++ LI G+  +   S+  
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESN 593
                M  K   P+    ++++ L+VK   S  S+  + + + + ++ ESN
Sbjct: 513 STFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK-DLQESN 562



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 171/357 (47%), Gaps = 15/357 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K+   +      +R+   GL PN+ TY  LI   C  G +   F  
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL 304

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  +   PN  TF+ LI  L    ++ EA      L   G + N + Y +LI+GLC+
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           TG    A  L ++M +     G V  P+  +YS++IDGLC++  + +A  +   M ++ I
Sbjct: 365 TGKIDAADELMQKMISE----GFV--PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
               VTY  +I  L         K++F +M+  G+ P +VT+ V +   C+  +M++A  
Sbjct: 419 QASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAES 478

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           ++  MV RGV PN  TYNTL+ G+  +G +++A   F  M   G K ++ SY +L+    
Sbjct: 479 MIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVV 538

Query: 359 KNKEVEEALSLYREMVSKGIKPT---VVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           K    + ++ +++    K ++ +    + +  L  GL +   V     L   M+  G
Sbjct: 539 KKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHG 595



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 17/244 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCK-IGRVSLGFI 117
           P   S++ L+  L + K           +   G+  +  TY I+I+   + +G      I
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F +++ +   P+  T+   ++    E R+ +A ++  ++   G  PN++TYNTLI G  
Sbjct: 445 -FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF--LQMKD 235
             G    A + FE M      +G   KPN  +Y+ ++  + K+   D +  ++    MKD
Sbjct: 504 NLGLVSQAFSTFEVM------VGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD 557

Query: 236 -ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            +  N D + +  LI+GL       E   L   M + G QPS     +I  E+    ++ 
Sbjct: 558 LQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQ 617

Query: 295 EASR 298
           E +R
Sbjct: 618 EIAR 621


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 247/484 (51%), Gaps = 22/484 (4%)

Query: 28  LLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR- 86
           +L +F+      G I+ +   E FC    +L +  +    +    LL S AKN HY    
Sbjct: 90  ILCYFKWTQKEFGAIHNV---EQFC---RLLHLLANAKNYNKIRALLDSFAKNAHYSNST 143

Query: 87  ----LNATGLF--PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
               L+  G +   N    ++L+  + K G + L    F R     F  +A + N ++  
Sbjct: 144 IFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS 203

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L  E RI    +++ ++       NV+T++ +INGLC+ G    A ++ E+M        
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG---- 259

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
               P+ +TY+TIIDG CK G + KA AL  +M  + I+P+ +T+N LI G C   +   
Sbjct: 260 --FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           AK++F EM  QG+QP+VVT+N +++ LC N K+DEA  L D M   G++PN  TYN L++
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GFC    +  A E+   +   G   + +++N LI+ Y K   +++A  L   M+  G+ P
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            V TYN L +G      V+ A KL  EM+ +G+ AD  TY   +D LCK G   +AV L 
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 441 RTLRILKCE---LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
             + +++ +    +I  YN LI G C  G+L+ A  L   +    L+PN  TY+I+   +
Sbjct: 498 DEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 557

Query: 498 CNDG 501
              G
Sbjct: 558 MEKG 561



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 253/510 (49%), Gaps = 31/510 (6%)

Query: 23  SNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH 82
           +N SSLL H  +   +        P+   C F +  +   +   V  F  LL  LA  K+
Sbjct: 71  TNPSSLLQHLFNSEAQ--------PDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKN 122

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG-RILRSCFTPNAATFNSLIKGL 141
           Y+ ++ A            L++ F K    S   I     +L S    N+   + L+   
Sbjct: 123 YN-KIRA------------LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAY 169

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                +  A   F +   +G   + ++ N ++  L + G   +  ++++EM      IGV
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR--RIGV 227

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
               N VT+  +I+GLCK G   KA  +   MK    +P V+TYN++I G C A    +A
Sbjct: 228 ----NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             L  EM+ + + P+ +TFN+++D  C++  +  A ++ + M ++G++PN  TYN+L++G
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  GK++ A  L   M  MG K + V+YN LING+CK K ++EA  +  ++  +G+ P 
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V+T+NTL     +  +++ A  L   M   GV  +  TY   I G C+ G + EA +L +
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF---CSLPHGVLVPNVVTYNIMIQGLC 498
            +     + D+  YN L+D LCK G  + A  L      +       N+VTYN++I+G C
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFC 523

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDML 528
           N G++++A  L  +M E    P+  T+D+L
Sbjct: 524 NKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 263/528 (49%), Gaps = 32/528 (6%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNI---LINCFCKIGRVSLGFI 117
           H    P  S  I     +K K      N + L  +L+       LI C+ K  +   G I
Sbjct: 45  HTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAI 104

Query: 118 ----AFGRILRSCFTPNAATFN-------SLIKGLH-AESRIMEAAALFTKLKAFGCEPN 165
                F R+L      NA  +N       S  K  H + S I  + ++   L ++GC  N
Sbjct: 105 HNVEQFCRLLH--LLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSV---LGSWGC-AN 158

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV-CKPNTVTYSTIIDGLCKEGFVD 224
            I  + L+    + G   +AL  F+   +    +  + C P  V+       L KEG + 
Sbjct: 159 SIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS-------LVKEGRIG 211

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
             ++++ +M    I  +VVT++ +I+GLC    + +A  +  +M   G  PSV+T+N I+
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D  CK  KM +A  LL  MV + + PN  T+N L+DGFC    +  A+++F  M+  G +
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + V+YN LING C N +++EAL L  +M   G+KP VVTYN L  G  +   ++ A ++
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            D++ + G+A +  T+ T ID   K G + +A  L   +       ++  YNCLI G C+
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM---EENAAAPD 521
            G +K A +L   +    L  ++VTYNI++  LC  G+  KA  L  +M   E+     +
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN 511

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++T+++LI GF    +  + N LL++M EK ++P+ +   I+ D +++
Sbjct: 512 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 559



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 188/342 (54%), Gaps = 9/342 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ T++++IN  CK+G+          +    F+P+  T+N++I G     ++ +A AL 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL 287

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++ A    PN IT+N LI+G CR  +   A  +FEEM           +PN VTY+++I
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG------LQPNVVTYNSLI 341

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +GLC  G +D+A  L  +M    + P+VVTYN+LI+G C      EA+ +  ++  +G+ 
Sbjct: 342 NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA 401

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+V+TFN ++D   K  +MD+A  L  +M+  GV PN  TYN L+ GFC  G +  A +L
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGIKPTVVTYNTLFLG 391
              ME  G K D V+YNIL++  CK  E  +A+ L  EM     KG +  +VTYN L  G
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKG 521

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
                ++E A +L +EM   G+  +  TY    D + + G+I
Sbjct: 522 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 182/367 (49%), Gaps = 24/367 (6%)

Query: 246 NSLIHGLCHANDWNEAKRLFIEMM---------------------DQGVQPSVVTFNVIM 284
           +++ H L     W  A  + ++M+                     D G + S ++ N ++
Sbjct: 142 STIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
             L K  ++     +   M++R +  N  T++ +++G C +GK  +A ++   M++ G  
Sbjct: 202 VSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              ++YN +I+GYCK  ++ +A +L +EMV+K I P  +T+N L  G      V  A K+
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F+EMQR G+  +  TY + I+GLC NG + EA+ L   +  +  + ++  YN LI+G CK
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
              LK A E+   +    L PNV+T+N +I      G+MD A  L   M +    P+V T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS---LPSFL 581
           ++ LI GF R     +  +L  +M+   +  D    +I+VD L K   + K+   L    
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMT 501

Query: 582 VQERQGE 588
           + E++G 
Sbjct: 502 LMEKKGR 508


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 147/439 (33%), Positives = 227/439 (51%), Gaps = 13/439 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN   F SLI  L   +R+ +AA     +   G  P+V+T+  LI G C+      A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK-DENINPDVVTYNS 247
           F+EM   N      C+P+   Y  +IDG CKE  +D+A  L  +M+ +  I PDVV YNS
Sbjct: 69  FQEMIKSNR-----CQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNS 123

Query: 248 LIHGLCHANDWNEAKRLFIE-MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           ++ GLC +N + EA +   E M+ QG  P+VVT+  ++   CK +KM  A  + + M++R
Sbjct: 124 IVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLER 183

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            ++P   +Y+ ++DG    G++  A  +   ME++GC+ + V Y  LI+G CK+  +++A
Sbjct: 184 KIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDA 243

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            +LYR M   G  P   TY TL        + E AL LFD + RD    D   YT  + G
Sbjct: 244 YALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSG 302

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVP 485
           LC+   + +A  LFR +R+     D  AYN L+ G  +SGR + A+ +   L      V 
Sbjct: 303 LCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVA 362

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           N++TYN +I G C +  M     LF +M +   APD  T+  LI   +   E  +  +L 
Sbjct: 363 NLLTYNTVIAGCCLESGM----VLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLC 418

Query: 546 HKMKEKKVMPDASIVSIVV 564
            +M    + P + ++  VV
Sbjct: 419 EEMLASGLSPPSGVLGRVV 437



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 226/481 (46%), Gaps = 24/481 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIG 110
           ML     PP   +F  L+ +L+K+        A       G+ P++ T+  LI  FCK  
Sbjct: 1   MLHSGTPPPNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNR 60

Query: 111 RVSLGFIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA-FGCEPNVI 167
            V   +  F  +++S  C  P+   +  LI G   E R+  A  L  +++     +P+V+
Sbjct: 61  MVERAWEIFQEMIKSNRC-QPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVV 119

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
            YN++++GLCR+   + A    +E     G     C P  VTY+++I G CK   +  A 
Sbjct: 120 IYNSIVDGLCRSNRFLEAWKFLDETMVRQG-----CSPTVVTYTSLIRGACKAKKMKLAM 174

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            ++  M +  I P +V+Y+ +I GL  A    +A R+  EM   G + +VV +  ++D L
Sbjct: 175 TIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGL 234

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK+  +D+A  L  +M + G  PN  TY TL+D FC   +   A  LF  +    C  D 
Sbjct: 235 CKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDV 293

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
             Y  +++G C+ + +++A +L+REM   G+      YN L  G F   + E A ++ +E
Sbjct: 294 AMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEE 353

Query: 408 MQRD-GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +  D G  A+  TY T I G C    ++    LF  +R      D   Y+ LID L  SG
Sbjct: 354 LGDDPGCVANLLTYNTVIAGCCLESGMV----LFYEMRQRGIAPDFATYSALIDRLLGSG 409

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            ++ A++L   +    L P       ++  LC   + D A  L   +E   A  D  +F 
Sbjct: 410 EIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKL---IEMAMAVDDTASFS 466

Query: 527 M 527
           +
Sbjct: 467 L 467



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN   + +L+D      ++  A      M   G   D V++  LI G+CKN+ VE A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 370 YREMV-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTRTYTTFIDGL 427
           ++EM+ S   +P    Y  L  G  +  +++ AL+L  EM+ +  +  D   Y + +DGL
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 428 CKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           C++   +EA +    T+    C   +  Y  LI G CK+ ++K A  ++ ++    + P 
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +V+Y+++I GL   G++  A  +  +ME      +V+ +  LI G  +         L  
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            MK     P+    + ++D   +N+ +  +L  F
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLF 282



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 3/242 (1%)

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           ++  LI+   K+  + +A      M   GI P VVT+  L  G  +   VE A ++F EM
Sbjct: 13  AFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEM 72

Query: 409 -QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI-LKCELDIQAYNCLIDGLCKSG 466
            + +    D   Y   IDG CK   +  A+EL R +R+  + + D+  YN ++DGLC+S 
Sbjct: 73  IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSN 132

Query: 467 RLKFAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           R   AW+    ++      P VVTY  +I+G C   +M  A  ++  M E    P ++++
Sbjct: 133 RFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSY 192

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
            ++I G  +         ++ +M+      +  I + ++D L K+     +   + + +R
Sbjct: 193 SVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKR 252

Query: 586 QG 587
            G
Sbjct: 253 SG 254


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 237/451 (52%), Gaps = 9/451 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+L  YN +I  FC+  R+   +    R+    F+P+  T+N LI  L +   +  A   
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             +L    C+P V+TY  LI      G    A+ L +EM   N       +P+  TY++I
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN------LQPDMFTYNSI 237

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G+C+EG+VD+A  +   +  +   PDV+TYN L+ GL +   W     L  +M+ +G 
Sbjct: 238 IRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGC 297

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           + +VVT++V++  +C++ K++E   LL  M ++G++P+   Y+ L+   C  G+++ A E
Sbjct: 298 EANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIE 357

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +   M S GC  D V+YN ++   CK K  +EALS++ ++   G  P   +YN++F  L+
Sbjct: 358 VLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALW 417

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI--LKCELD 451
                  AL +  EM   GV  D  TY + I  LC++G + EA+EL   + +   +C+  
Sbjct: 418 STGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPS 477

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + +YN ++ GLCK  R+  A E+  ++      PN  TY  +I+G+   G ++ ARDL  
Sbjct: 478 VVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLAT 537

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            +  N  A    +F+ L   F +++   ++N
Sbjct: 538 TL-VNMDAISEHSFERLYKTFCKLDVYRQLN 567



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 244/509 (47%), Gaps = 16/509 (3%)

Query: 59  RMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           R  P     ++ N  L+S++K + +      T L  +L          CK G  +     
Sbjct: 27  RTLPILNETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRS-------CKAGNFNESLYF 79

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     P+      LI GL     I +A  +   L+  G  P++I YN +I G CR
Sbjct: 80  LRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCR 138

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  + + M N          P+ VTY+ +I  LC  G +D A     Q+  EN 
Sbjct: 139 ANRIDSAYQVLDRMKNKG------FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENC 192

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P VVTY  LI         +EA +L  EM++  +QP + T+N I+  +C+   +D A +
Sbjct: 193 KPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQ 252

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           ++  +  +G  P+  TYN L+ G    GK     EL   M + GC+ + V+Y++LI+  C
Sbjct: 253 IISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVC 312

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           ++ +VEE + L ++M  KG+KP    Y+ L   L +  +V+ A+++ D M  DG   D  
Sbjct: 313 RDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIV 372

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y T +  LCK     EA+ +F  L  + C  +  +YN +   L  +G    A  +   +
Sbjct: 373 NYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEM 432

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA--APDVITFDMLIHGFIRIN 536
               + P+ +TYN +I  LC DG +D+A +L +DME  ++   P V+++++++ G  +++
Sbjct: 433 LDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVS 492

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             S   E+L  M +K   P+ +  + +++
Sbjct: 493 RVSDAIEVLAAMVDKGCRPNETTYTFLIE 521



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 194/416 (46%), Gaps = 37/416 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N ++    +    D+      R+   G  P++ TYNILI   C  G +      
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L+    P   T+  LI+    +  I EA  L  ++     +P++ TYN++I G+CR
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 179 TGHTMIALNLFEEMAN--------------------GNGEIGVV---------CKPNTVT 209
            G+   A  +   +++                    G  E G           C+ N VT
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I  +C++G V++   L   MK + + PD   Y+ LI  LC     + A  +   M+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P +V +N I+  LCK ++ DEA  + + + + G  PNA +YN++       G   
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY--REMVSKGIKPTVVTYNT 387
           RA  +   M   G   D ++YN LI+  C++  V+EA+ L    EM S   KP+VV+YN 
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           + LGL ++ +V  A+++   M   G   +  TYT  I+G+   G + +A +L  TL
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 184/367 (50%), Gaps = 1/367 (0%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           KP+ V  + +I GL     +DKA  + + + + + +PD++ YN++I G C AN  + A +
Sbjct: 89  KPDVVLCTKLIHGLFTSKTIDKAIQV-MHILENHGHPDLIAYNAIITGFCRANRIDSAYQ 147

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +   M ++G  P +VT+N+++  LC    +D A    + +++   +P   TY  L++   
Sbjct: 148 VLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATL 207

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           L G I+ A +L   M  +  + D  +YN +I G C+   V+ A  +   + SKG  P V+
Sbjct: 208 LQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVI 267

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN L  GL    + E   +L  +M   G  A+  TY+  I  +C++G + E V L + +
Sbjct: 268 TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM 327

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +    + D   Y+ LI  LCK GR+  A E+   +     VP++V YN ++  LC   + 
Sbjct: 328 KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRA 387

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A  +F  + E   +P+  +++ +           +   ++ +M +K V PD    + +
Sbjct: 388 DEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSL 447

Query: 564 VDLLVKN 570
           +  L ++
Sbjct: 448 ISCLCRD 454



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 170/338 (50%), Gaps = 4/338 (1%)

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C A ++NE+      ++++G +P VV    ++  L  ++ +D+A +++ ++   G  P+ 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
             YN ++ GFC   +I+ A ++   M++ G   D V+YNILI   C    ++ AL    +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           ++ +  KPTVVTY  L         ++ A+KL DEM    +  D  TY + I G+C+ GY
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A ++  ++       D+  YN L+ GL   G+ +  +EL   +       NVVTY++
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I  +C DG++++   L  DM++    PD   +D LI    +        E+L  M    
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
            +PD    + ++  L K + + ++L  F   E+ GEVG
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIF---EKLGEVG 401



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 22/317 (6%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++NILL  L     ++      + + A G   N+ TY++LI+  C+ G+V  G   
Sbjct: 264 PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGL 323

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +    P+   ++ LI  L  E R+  A  +   + + GC P+++ YNT++  LC+
Sbjct: 324 LKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCK 383

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL++FE++    GE+G  C PN  +Y+++   L   G   +A  + L+M D+ +
Sbjct: 384 QKRADEALSIFEKL----GEVG--CSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV 437

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFI--EMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           +PD +TYNSLI  LC     +EA  L +  EM     +PSVV++N+++  LCK  ++ +A
Sbjct: 438 DPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDA 497

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +L  MV +G RPN  TY  L++G    G +N A +L  ++ +M    +  S+  L   
Sbjct: 498 IEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEH-SFERLYKT 556

Query: 357 YCKNKEVEEALSLYREM 373
           +CK       L +YR++
Sbjct: 557 FCK-------LDVYRQL 566


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 256/525 (48%), Gaps = 44/525 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P    Y  LI  F +   V  G+     I +     +  T+ + +KG+ +   +  A
Sbjct: 380 GVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++ A GC PNV+ Y TLI    +      A+ + +EM     E G+   P+T  Y
Sbjct: 440 YNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR----EQGIA--PDTFCY 493

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +++I GL K   +D+A++  L+M +    PD  TY + I G   A ++  A +   EM++
Sbjct: 494 NSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLE 553

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV P+ V    +++E CK  K+ EA      MV++G+  +A TY  LM+G    GK+N 
Sbjct: 554 CGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVND 613

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AEE+F  M   G   D  SY  LI+G+ K   +++A S++ EMV  G+   V+ YN L  
Sbjct: 614 AEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLG 673

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G     ++E A +L DEM   G   +  TY T IDG CK+G + EA +LF  +++     
Sbjct: 674 GFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVP 733

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELF---------CSLPHGVLV----------------- 484
           D   Y  L+DG C+   ++ A  +F          S P   L+                 
Sbjct: 734 DSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMIN 793

Query: 485 ------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                       PN VTYNIMI  LC +G ++ A++LF  M++    P VIT+  L++G+
Sbjct: 794 RLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGY 853

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            ++   S++  +  ++    + PD  + S++++  +K  ++ K+L
Sbjct: 854 DKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKAL 898



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 226/482 (46%), Gaps = 12/482 (2%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+N+L+  L K K  +        +N+ GLF +   Y+ILI+   K          
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGL 337

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++   F+ +   ++  I  +  E  + +A ALF  +  FG  P    Y +LI G  R
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             +      L  E+   N    +V  P   TY T + G+C  G +D A  +  +M     
Sbjct: 398 EKNVRKGYELLVEIKKRN----IVISP--YTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VV Y +LI      + + +A R+  EM +QG+ P    +N ++  L K +KMDEA  
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L  MV+ G +P+A TY   + G+   G+   A++    M   G   + V    LIN YC
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V EA S +R MV +GI     TY  L  GL +  +V  A ++F EM+  G+A D  
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y T IDG  K G + +A  +F  +       ++  YN L+ G C+SG ++ A EL   +
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PN VTY  +I G C  G + +A  LF +M+     PD   +  L+ G  R+N+ 
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 751

Query: 539 SK 540
            +
Sbjct: 752 ER 753



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 244/516 (47%), Gaps = 32/516 (6%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            + A+G  PN+  Y  LI  F +  R          +      P+   +NSLI GL    
Sbjct: 445 EMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAK 504

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ EA +   ++   G +P+  TY   I+G    G    A    +EM     E GV+  P
Sbjct: 505 KMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML----ECGVI--P 558

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V  + +I+  CK+G V +A + F  M ++ I  D  TY  L++GL      N+A+ +F
Sbjct: 559 NKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIF 618

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  +G+ P V ++  ++D   K   M +AS + D MVQ G+  N   YN L+ GFC  
Sbjct: 619 HEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRS 678

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+I +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG+ P    Y
Sbjct: 679 GEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVY 738

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            TL  G   ++ VE A+ +F E    G A+ +  +   I+ + K G      ++    R+
Sbjct: 739 TTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMIN--RL 795

Query: 446 LKCELDI------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           +    D         YN +ID LCK G L+ A ELF  +    L+P V+TY  ++ G   
Sbjct: 796 MDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDK 855

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G+  +   +F ++      PD I + ++I+ F++    +K   LL +M  K  + D   
Sbjct: 856 MGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCK 915

Query: 560 VSI-----------------VVDLLVKNEISLKSLP 578
           +SI                 V + +V+N + LK +P
Sbjct: 916 LSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIP 951



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 203/439 (46%), Gaps = 6/439 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             P+  ++N LI GL  + R+ +A +L  ++ + G   + + Y+ LI+GL +  +   A 
Sbjct: 276 LVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAAN 335

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L  EM +    I      + + Y   I  + KEG ++KAKALF  M    + P    Y 
Sbjct: 336 GLVHEMVSHGFSI------DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYA 389

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           SLI G     +  +   L +E+  + +  S  T+   +  +C +  +D A  ++  M   
Sbjct: 390 SLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGAS 449

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G RPN   Y TL+  F    +   A  +   M   G   D   YN LI G  K K+++EA
Sbjct: 450 GCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEA 509

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            S   EMV  G KP   TY     G  E  +   A K   EM   GV  +    T  I+ 
Sbjct: 510 RSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINE 569

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            CK G +IEA   FR++       D + Y  L++GL K+G++  A E+F  +    + P+
Sbjct: 570 YCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPD 629

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V +Y  +I G    G M KA  +F +M +     +VI ++ML+ GF R  E  K  ELL 
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689

Query: 547 KMKEKKVMPDASIVSIVVD 565
           +M  K   P+A     ++D
Sbjct: 690 EMSGKGFPPNAVTYCTIID 708



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 214/501 (42%), Gaps = 57/501 (11%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
           +R     P    +N L+  L+K K  D        +   G  P+ +TY   I+ + + G 
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            +        +L     PN      LI     + +++EA + F  +   G   +  TY  
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+NGL + G    A  +F EM  G G       P+  +Y T+IDG  K G + KA ++F 
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEM-RGKG-----IAPDVFSYGTLIDGFSKLGNMQKASSIFD 654

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M    +  +V+ YN L+ G C + +  +AK L  EM  +G  P+ VT+  I+D  CK+ 
Sbjct: 655 EMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSG 714

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF---------------- 335
            + EA +L D M  +G+ P++  Y TL+DG C +  + RA  +F                
Sbjct: 715 DLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNA 774

Query: 336 -----------------------GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
                                  GS +  G K +DV+YNI+I+  CK   +E A  L+  
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHH 833

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M    + PTV+TY +L  G  ++ +      +FDE+   G+  D   Y+  I+   K G 
Sbjct: 834 MQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGM 893

Query: 433 IIEAVELFRTLRILK-----CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
             +A+ L   +         C+L I     L+ G  K G ++ A ++  ++     +P+ 
Sbjct: 894 TTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDS 953

Query: 488 VTYNIMIQGLCNDGQMDKARD 508
            T   +I   C       A D
Sbjct: 954 STVIELINESCISSNQRMAAD 974



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 210/461 (45%), Gaps = 22/461 (4%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCE--PNVITYNTLINGLCRTGHTMIALNLFEE 191
           F  LI G   +  + EA  +F+  K    +  P++   N L++ L +       L+LF +
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNR----LDLFWD 210

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           +  G  E  VV   +  +Y  +I   C++G V  AK + L+ ++E       T N     
Sbjct: 211 VYKGMVERNVVF--DVQSYEMLIGAHCRDGNVQLAKDVLLKTEEE---LGTATLNV---- 261

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
                  +EA  L   M  +G+ PS  ++N+++D LCK +++++A  LL  M   G+  +
Sbjct: 262 -------DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFAD 314

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
              Y+ L+DG       + A  L   M S G   D + Y+  I    K   +E+A +L+ 
Sbjct: 315 NVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFD 374

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            M++ G+ P    Y +L  G F    V    +L  E+++  +     TY T + G+C +G
Sbjct: 375 GMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSG 434

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            +  A  + + +    C  ++  Y  LI    +  R   A  +   +    + P+   YN
Sbjct: 435 DLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYN 494

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I GL    +MD+AR   L+M EN   PD  T+   I G+I   E +  ++ + +M E 
Sbjct: 495 SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC 554

Query: 552 KVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            V+P+  + + +++   K    +++  +F     QG +G++
Sbjct: 555 GVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 157/355 (44%), Gaps = 46/355 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYN 100
           N+A  IF  M R     P V S+  L+   +K       +  +D  + A GL  N+  YN
Sbjct: 612 NDAEEIFHEM-RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQA-GLTSNVIIYN 669

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +L+  FC+ G +         +    F PNA T+ ++I G      + EA  LF ++K  
Sbjct: 670 MLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG------------------------- 195
           G  P+   Y TL++G CR      A+ +FE    G                         
Sbjct: 730 GLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTT 789

Query: 196 -------NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
                  +G      KPN VTY+ +ID LCKEG ++ AK LF  M+  N+ P V+TY SL
Sbjct: 790 DMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSL 849

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           ++G       +E   +F E++  G++P  + ++VI++   K     +A  LLD M  +  
Sbjct: 850 LNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNA 909

Query: 309 RPNAC-----TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             + C     T   L+ GF  +G++  AE++  +M  +    D  +   LIN  C
Sbjct: 910 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 161/599 (26%), Positives = 284/599 (47%), Gaps = 80/599 (13%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYN 100
           P++A  IF  M  +    P + S+N LL +L ++  +D            GL PNL TYN
Sbjct: 94  PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 153

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI   C+  +          +    F+P+  ++ +LI  L     + +A  LF ++   
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+V  YN LI+G  + G  + A  ++E +  G         PN  +Y+ +I+GLCK 
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS-----VYPNIPSYNVMINGLCKC 268

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP----- 275
           G  D++  ++ +MK      D+ TY++LIHGLC + + + A R++ EM + GV P     
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328

Query: 276 -----------------------------SVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
                                        +VV++N+++  L +N K+DEA  + +L+ ++
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 307 GVRPNACTYNTLMDGFCLMGKINRA--------------------------------EEL 334
               ++ TY  L+ G C  G +N+A                                +E+
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 335 FGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            G ++ M   GCK +    N +ING+ +  ++E+AL  +  MVSKG  PTVVTYNTL  G
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  +   A  L  EM   G   +  TY+  ++GLC+   +  A+ L+        + D
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           ++ +N +I GLC SG+++ A +L+  +     VPN+VT+N +++G       ++A  ++ 
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWD 628

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            + +    PD+I++++ + G    +  S     L+   ++ V+P A   +I+V  ++ N
Sbjct: 629 HILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 224/444 (50%), Gaps = 8/444 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   ++NSL+  L   ++  EA + F   +  G  PN+ TYN LI   CR        + 
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQ----FDK 167

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            +E+ N   E G    P+  +Y T+I+ L K G++  A  LF +M +  + PDV  YN L
Sbjct: 168 AKELLNWMWEQGF--SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225

Query: 249 IHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           I G     D   A  ++  ++    V P++ ++NV+++ LCK  K DE+  +   M +  
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              +  TY+TL+ G C  G ++ A  ++  M   G   D V YN ++NGY +   +EE L
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L++ M  +G + TVV+YN L  GLFE  +V+ A+ +++ +      AD+ TY   + GL
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CKNGY+ +A+ +       + +LD  AY+ +I+GLC+ GRL     +   +      PN 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
              N +I G     +++ A   F +M      P V+T++ LI+G  +    S+   L+ +
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 548 MKEKKVMPDASIVSIVVDLLVKNE 571
           M  K   P+    S++++ L + +
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGK 548



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 221/444 (49%), Gaps = 7/444 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           ++     F+ ++K L     +   + +   ++   C+       T+I    +      AL
Sbjct: 39  YSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQAL 98

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           ++F+ M    G     C+P   +Y+++++ L +    D+A++ FL  +   ++P++ TYN
Sbjct: 99  DIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 153

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI   C    +++AK L   M +QG  P V ++  +++ L KN  M +A +L D M +R
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV-SYNILINGYCKNKEVEE 365
           GV P+   YN L+DGF   G I  A E++  +      + ++ SYN++ING CK  + +E
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           +  ++  M        + TY+TL  GL     ++ A +++ EM  +GV+ D   Y T ++
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           G  + G I E +EL++ +    C   + +YN LI GL ++ ++  A  ++  LP      
Sbjct: 334 GYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           + +TY +++ GLC +G ++KA  +  + E      D   +  +I+G  R     +V  +L
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452

Query: 546 HKMKEKKVMPDASIVSIVVDLLVK 569
            +M +    P+  + + V++  V+
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVR 476



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 2/318 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G   +   F+ I+  L   + +   SR+++L+  +  +       T++  +      ++A
Sbjct: 38  GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97

Query: 332 EELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
            ++F  M E  GC+    SYN L+N   ++ + +EA S +    + G+ P + TYN L  
Sbjct: 98  LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
                 Q + A +L + M   G + D  +Y T I+ L KNGY+ +A++LF  +       
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV-PNVVTYNIMIQGLCNDGQMDKARDL 509
           D+  YN LIDG  K G +  A E++  L  G  V PN+ +YN+MI GLC  G+ D++ ++
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +  M++N    D+ T+  LIHG            +  +M E  V PD  + + +++  ++
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337

Query: 570 NEISLKSLPSFLVQERQG 587
                + L  + V E++G
Sbjct: 338 AGRIEECLELWKVMEKEG 355


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 245/485 (50%), Gaps = 6/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G   N Y+YN LI+   K    +     + R++   F P+  T++SL+ GL    
Sbjct: 180 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRR 239

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I     L  +++  G +PNV T+   I  L R G    A  + + M +        C P
Sbjct: 240 DIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGP 293

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+ +ID LC    +D AK +F +MK     PD VTY +L+       D +   + +
Sbjct: 294 DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFW 353

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P VVTF +++D LCK     EA   LD+M  +G+ PN  TYNTL+ G   +
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +++ A E+F +MES+G K    +Y + I+ Y K+ +   AL  + +M +KGI P +V  
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 473

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N     L +  +   A ++F  ++  G+  D+ TY   +    K G I EA++L   +  
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVE 533

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             CE D+   N LI+ L K+ R+  AW++F  +    L P VVTYN ++ GL  +G++ +
Sbjct: 534 NCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 593

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A +LF  M +    P+ ITF+ L     + +E +   ++L KM +   +PD    + ++ 
Sbjct: 594 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 653

Query: 566 LLVKN 570
            LVKN
Sbjct: 654 GLVKN 658



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 238/476 (50%), Gaps = 13/476 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +++ L+  L K +  ++       +   GL PN+YT+ I I    + G+++  +  
Sbjct: 223 PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 282

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+      P+  T+  LI  L    ++  A  +F K+K    +P+ +TY TL++    
Sbjct: 283 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRF-S 341

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               + ++N F      +G +     P+ VT++ ++D LCK G   +A A    M+D+ I
Sbjct: 342 DNRDLDSVNQFWSEMEKDGHV-----PDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGI 396

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++ TYN+LI GL   +  ++A  +F  M   GV+P+  T+ V +D   K+     A  
Sbjct: 397 LPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 456

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             + M  +G+ PN    N  +      G+   A+++F  ++ +G   D V+YN+++  Y 
Sbjct: 457 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 516

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  E++EA+ L  EMV    +P V+  N+L   L++  +V+ A K+F  M+   +     
Sbjct: 517 KVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 576

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + GL KNG I EA+ELF  +    C  +   +N L D LCK+  +  A ++   +
Sbjct: 577 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 636

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
                VP+V TYN +I GL  +GQ+ +A   F  M++    PD +T   L+ G ++
Sbjct: 637 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVK 691



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 233/473 (49%), Gaps = 6/473 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T N ++      G++      F  + +     +  T+ ++ K L  +  + +A     K+
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           + FG   N  +YN LI+ L ++     A+ ++  M      I    +P+  TYS+++ GL
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM------ILDGFRPSLQTYSSLMVGL 235

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            K   ++    L  +M+   + P+V T+   I  L  A   NEA  +   M D+G  P V
Sbjct: 236 GKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 295

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT+ V++D LC  RK+D A  +   M     +P+  TY TL+D F     ++   + +  
Sbjct: 296 VTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSE 355

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME  G   D V++ IL++  CK     EA +    M  +GI P + TYNTL  GL  +H+
Sbjct: 356 MEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHR 415

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ AL++FD M+  GV     TY  FID   K+G  + A+E F  ++      +I A N 
Sbjct: 416 LDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 475

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            +  L K+GR + A ++F  L    LVP+ VTYN+M++     G++D+A  L  +M EN 
Sbjct: 476 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENC 535

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             PDVI  + LI+   + +   +  ++  +MKE K+ P     + ++  L KN
Sbjct: 536 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 588



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 157/553 (28%), Positives = 246/553 (44%), Gaps = 58/553 (10%)

Query: 65   PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P + + N  L SLAK       K     L   GL P+  TYN+++ C+ K+G +      
Sbjct: 468  PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 527

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
               ++ +C  P+    NSLI  L+   R+ EA  +F ++K    +P V+TYNTL+ GL +
Sbjct: 528  LSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 587

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G    A+ LFE M          C PNT+T++T+ D LCK   V  A  +  +M D   
Sbjct: 588  NGKIQEAIELFEGMVQKG------CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 641

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             PDV TYN++I GL       EA   F   M + V P  VT   ++  + K   +++A +
Sbjct: 642  VPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYK 700

Query: 299  LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILING 356
            ++ + +     +P    +  LM        I+ A      + + G C+  D     +I  
Sbjct: 701  IIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 760

Query: 357  YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
              K+     A  L+ +     G++P + TYN L  GL E   +E A  +F +++  G   
Sbjct: 761  SFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIP 820

Query: 416  DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE----------------------LDIQ 453
            D  TY   +D   K+G I E  E+++ +   +CE                      LD+ 
Sbjct: 821  DVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLY 880

Query: 454  --------------AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
                           Y  LIDGL KSGRL  A +LF  +      PN   YNI+I G   
Sbjct: 881  YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGK 940

Query: 500  DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH---KMKEKKVMPD 556
             G+ D A  LF  M +    PD+ T+ +L+     +    +V+E LH   ++KE  + PD
Sbjct: 941  AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV---GRVDEGLHYFRELKESGLNPD 997

Query: 557  ASIVSIVVDLLVK 569
                +++++ L K
Sbjct: 998  VVCYNLIINGLGK 1010



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 254/554 (45%), Gaps = 48/554 (8%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
            +EA+ +F  M  M   P  V ++N LLA L KN      +         G  PN  T+N 
Sbjct: 557  DEAWKMFMRMKEMKLKPT-VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 615

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            L +C CK   V+L      +++     P+  T+N++I GL    ++ EA   F ++K   
Sbjct: 616  LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL- 674

Query: 162  CEPNVITYNTLINGLCRTG-----HTMIA----------LNLFEEMANGN--GEIGVVCK 204
              P+ +T  TL+ G+ + G     + +IA           NLF E   G+   E G+   
Sbjct: 675  VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGI--- 731

Query: 205  PNTVTYST--IIDGLCKEG---------------FVDKAKALFLQM-KDENINPDVVTYN 246
             N V++S   + +G+C++G                   A+ LF +  KD  + P + TYN
Sbjct: 732  DNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYN 791

Query: 247  SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
             LI GL  A+    A+ +F+++ + G  P V T+N ++D   K+ K+DE   +   M   
Sbjct: 792  LLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851

Query: 307  GVRPNACTYNTLMDGFCLMGKINRAEELFGS-MESMGCKHDDVSYNILINGYCKNKEVEE 365
               PN  T+N ++ G    G ++ A +L+   M          +Y  LI+G  K+  + E
Sbjct: 852  ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911

Query: 366  ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
            A  L+  M   G +P    YN L  G  +  + + A  LF  M ++GV  D +TY+  +D
Sbjct: 912  AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 971

Query: 426  GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LV 484
             LC  G + E +  FR L+      D+  YN +I+GL K  RL+ A  LF  +     + 
Sbjct: 972  CLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGIT 1031

Query: 485  PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            P++ TYN +I  L   G +++A  ++ +++     P+V TF+ LI G+    +P     +
Sbjct: 1032 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1091

Query: 545  LHKMKEKKVMPDAS 558
               M      P+  
Sbjct: 1092 YQTMVTGGFSPNTG 1105



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 250/527 (47%), Gaps = 54/527 (10%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
             EA  +F+ M++    PP   +FN L   L KN      L         G  P+++TYN 
Sbjct: 592  QEAIELFEGMVQ-KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 650

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +I    K G+V      F ++ +  + P+  T  +L+ G+     I +A  +      + 
Sbjct: 651  IIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKAGLIEDAYKIIANF-LYS 708

Query: 162  C--EPNVITYNTLI---------------------NGLCRTGHTMI-------------- 184
            C  +P  + +  L+                     NG+CR G +++              
Sbjct: 709  CADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNAS 768

Query: 185  -ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
             A  LFE+      ++GV  +P   TY+ +I GL +   ++ A+ +FLQ+K+    PDV 
Sbjct: 769  GARMLFEKFTK---DLGV--QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVA 823

Query: 244  TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL-DL 302
            TYN L+     +   +E   ++ EM     +P+ +T N+++  L K   +D+A  L  DL
Sbjct: 824  TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883

Query: 303  MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
            M  R   P ACTY  L+DG    G++  A++LF  M   GC+ +   YNILING+ K  E
Sbjct: 884  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943

Query: 363  VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
             + A +L++ MV +G++P + TY+ L   L  + +V+  L  F E++  G+  D   Y  
Sbjct: 944  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNL 1003

Query: 423  FIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             I+GL K   + EA+ LF  ++  +    D+  YN LI  L  +G ++ A +++  +   
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063

Query: 482  VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             L PNV T+N +I+G    G+ + A  ++  M     +P+  T++ L
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 14/299 (4%)

Query: 65   PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V+++N LL +  K+   D        ++A    PN  T+NI+I+   K G V      
Sbjct: 820  PDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDL 879

Query: 119  FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  ++    F+P A T+  LI GL    R+ EA  LF  +  +GC PN   YN LING  
Sbjct: 880  YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFG 939

Query: 178  RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            + G    A  LF+ M       GV  +P+  TYS ++D LC  G VD+    F ++K+  
Sbjct: 940  KAGEADAACALFKRMVKE----GV--RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993

Query: 238  INPDVVTYNSLIHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEA 296
            +NPDVV YN +I+GL   +   EA  LF EM   +G+ P + T+N ++  L     ++EA
Sbjct: 994  LNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEA 1053

Query: 297  SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
             ++ + + + G+ PN  T+N L+ G+ L GK   A  ++ +M + G   +  +Y  L N
Sbjct: 1054 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 157/344 (45%), Gaps = 35/344 (10%)

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N +++ L  + K++E + + DLM +R ++ +  TY T+     + G + +A      M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   +  SYN LI+   K++   EA+ +YR M+  G +P++ TY++L +GL +   +
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E  + L  EM+  G+  +  T+T  I  L + G I EA E+ + +    C  D+  Y  L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVL----------------------------------- 483
           ID LC + +L  A E+F  +  G                                     
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP+VVT+ I++  LC  G   +A      M +    P++ T++ LI G +R++      E
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +   M+   V P A    + +D   K+  S+ +L +F   + +G
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 465



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 187/435 (42%), Gaps = 70/435 (16%)

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           T T + +++ L  +G +++   +F  M+   I  D  TY ++   L       +A     
Sbjct: 120 TETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALR 179

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF---- 322
           +M + G   +  ++N ++  L K+R   EA  +   M+  G RP+  TY++LM G     
Sbjct: 180 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRR 239

Query: 323 --------------------------CL-----MGKINRAEELFGSMESMGCKHDDVSYN 351
                                     C+      GKIN A E+   M+  GC  D V+Y 
Sbjct: 240 DIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 299

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           +LI+  C  ++++ A  ++ +M +   KP  VTY TL     +   ++   + + EM++D
Sbjct: 300 VLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD 359

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   D  T+T  +D LCK G   EA      +R      ++  YN LI GL +  RL  A
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 419

Query: 472 WELFCSLPH-GV----------------------------------LVPNVVTYNIMIQG 496
            E+F ++   GV                                  + PN+V  N  +  
Sbjct: 420 LEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 479

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L   G+  +A+ +F  +++    PD +T++M++  + ++ E  +  +LL +M E    PD
Sbjct: 480 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPD 539

Query: 557 ASIVSIVVDLLVKNE 571
             +V+ +++ L K +
Sbjct: 540 VIVVNSLINTLYKAD 554


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 270/534 (50%), Gaps = 17/534 (3%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLA--------SLAKNKHYDTRLNATGLFPNLYT 98
           P+ A  IF  M+R+   P  ++   +L+         S++  +     +   G+  N+ T
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQT 206

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +N+L+N +C  G++        R++      P+  T+N+++K +  + R+ +   L   +
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K  G  PN +TYN L+ G C+ G    A  + E M   N        P+  TY+ +I+GL
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN------VLPDLCTYNILINGL 320

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G + +   L   MK   + PDVVTYN+LI G        EA++L  +M + GV+ + 
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380

Query: 278 VTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VT N+ +  LCK  K +  +R + +L+   G  P+  TY+TL+  +  +G ++ A E+  
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   G K + ++ N +++  CK ++++EA +L      +G     VTY TL +G F   
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +VE AL+++DEM++  +     T+ + I GLC +G    A+E F  L       D   +N
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +I G CK GR++ A+E +         P+  T NI++ GLC +G  +KA + F  + E 
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               D +T++ +I  F +  +  +  +LL +M+EK + PD    +  + LL+++
Sbjct: 621 REV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED 673



 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 249/498 (50%), Gaps = 35/498 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNIL 102
           +A  + + M+      P   ++N +L +++K       K     +   GL PN  TYN L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +  +CK+G +   F     + ++   P+  T+N LI GL     + E   L   +K+   
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           +P+V+TYNTLI+G    G ++ A  L E+M N     GV  K N VT++  +  LCKE  
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMEND----GV--KANQVTHNISLKWLCKE-- 393

Query: 223 VDKAKALFLQMKD----ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            +K +A+  ++K+       +PD+VTY++LI       D + A  +  EM  +G++ + +
Sbjct: 394 -EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T N I+D LCK RK+DEA  LL+   +RG   +  TY TL+ GF    K+ +A E++  M
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           + +       ++N LI G C + + E A+  + E+   G+ P   T+N++ LG  +  +V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E A + ++E  +     D  T    ++GLCK G   +A+  F TL I + E+D   YN +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTM 631

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA------------ 506
           I   CK  +LK A++L   +    L P+  TYN  I  L  DG++ +             
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691

Query: 507 ---RDLFLDMEENAAAPD 521
              RDL ++ E+N A  +
Sbjct: 692 SMKRDLQVETEKNPATSE 709



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 256/500 (51%), Gaps = 13/500 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL---HAESRIMEA 150
           P+   ++I ++ +   G+  +    F +++R    PN  T N+L+ GL    +   I  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F  +   G   NV T+N L+NG C  G    AL + E M +   E  V   P+ VTY
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS---EFKV--NPDNVTY 243

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TI+  + K+G +   K L L MK   + P+ VTYN+L++G C      EA ++ +E+M 
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELMK 302

Query: 271 Q-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           Q  V P + T+N++++ LC    M E   L+D M    ++P+  TYNTL+DG   +G   
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYNTL 388
            A +L   ME+ G K + V++NI +   CK ++ E      +E+V   G  P +VTY+TL
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                ++  +  AL++  EM + G+  +T T  T +D LCK   + EA  L  +      
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
            +D   Y  LI G  +  +++ A E++  +    + P V T+N +I GLC+ G+ + A +
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
            F ++ E+   PD  TF+ +I G+ +     K  E  ++  +    PD    +I+++ L 
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602

Query: 569 KNEISLKSLPSF--LVQERQ 586
           K  ++ K+L  F  L++ER+
Sbjct: 603 KEGMTEKALNFFNTLIEERE 622



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 30/228 (13%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P + T+N LI   C  G+  L    F  +  S   P+ +TFNS+I G   E R+ +A   
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           + +      +P+  T N L+NGLC+ G T  ALN F  +           + +TVTY+T+
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-------EVDTVTYNTM 631

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM----- 268
           I   CK+  + +A  L  +M+++ + PD  TYNS I  L      +E   L  +      
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691

Query: 269 -MDQGVQ-----------------PSVVTFNVIMDELCKNRKMDEASR 298
            M + +Q                    + ++ ++DELC   ++ E SR
Sbjct: 692 SMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 166/565 (29%), Positives = 272/565 (48%), Gaps = 50/565 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N  +  L +    D  L         GL P+ +TY +L++ FCK  R     + 
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +  S   PN  T+ +LI G   E  I EA  +  ++   G + NV+TYN +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A++LF EM     E      P+T TY+ +IDG  K   + KA  L  +MK   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGIE------PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF------------------ 280
            P   TY+ LI GLCH++D  +A  +  +M+  GV+P+V  +                  
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 281 -----------------NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                            N ++  LC+ +K++EA  LL  M ++G++PNA TY   ++ + 
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+I  AE  F  M S G   ++V Y ILI G+C      EALS ++ M+ KG+ P + 
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y+ +   L +  + + A+ +F +  + GV  D   Y + I G CK G I +A +L+  +
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 444 RILKCELDIQAYNCLID--GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                  +I  YN LI+  G CKSG L  A++LF  +    + P+   Y I+I G   +G
Sbjct: 688 LHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 747

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            ++KA  LF + ++ +    +  F+ LI  F +  +  +  EL   M +KK+ P+    +
Sbjct: 748 NLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 806

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQ 586
           I++D   K E+  ++   FL  E +
Sbjct: 807 ILIDAYGKAEMMEEAEQLFLDMETR 831



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/524 (30%), Positives = 242/524 (46%), Gaps = 44/524 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  N+ TYN +I    K G ++     F  +L +   P+  T+N LI G      + +A
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKA 435

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++KA    P+  TY+ LI+GLC +     A  + ++M   NG      KPN   Y
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NG-----VKPNVFMY 489

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T+I    +E   + A  L   M    + PD+  YN LI GLC A    EAK L ++M +
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 549

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++P+  T+   ++   K+ ++  A R    M+  G+ PN   Y  L+ G C +G    
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609

Query: 331 AEELFGSM--------------------------ESMGC---------KHDDVSYNILIN 355
           A   F  M                          E+MG            D   YN LI+
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF--LGLFEIHQVEHALKLFDEMQRDGV 413
           G+CK  ++E+A  LY EM+  GI P +V YNTL    G  +   +  A KLFDEM   G+
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGI 729

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           + D   Y   IDG  K G + +A+ LF   +  K    + A+N LID  CK G++  A E
Sbjct: 730 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVGSLSAFNSLIDSFCKHGKVIEARE 788

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  +    L PN+VTY I+I        M++A  LFLDME     P+ +T+  L+  + 
Sbjct: 789 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 848

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           +I    K+  L   M+ + +  DA    ++     K   SL++L
Sbjct: 849 QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 892



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 274/580 (47%), Gaps = 45/580 (7%)

Query: 34  DLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVSSFNILLAS---- 76
           ++ TR   +NV+T N             +A  +F+ ML M    P   ++N+L+      
Sbjct: 371 EMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML-MAGIEPDTWTYNLLIDGYLKS 429

Query: 77  --LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
             +AK       + A  L P+ +TY++LI+  C    +        +++R+   PN   +
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
            +LIK    ESR   A  L   + A G  P++  YN LI GLCR      A  L  +M  
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-- 547

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
             GE G+  KPN  TY   I+   K G +  A+  F  M    I P+ V Y  LI G C 
Sbjct: 548 --GEKGI--KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
             +  EA   F  M+++G+ P +  ++ I+  L KN K  EA  +    ++ GV P+   
Sbjct: 604 VGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFL 663

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN--GYCKNKEVEEALSLYRE 372
           YN+L+ GFC  G I +A +L+  M   G   + V YN LIN  GYCK+  + EA  L+ E
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDE 723

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+SKGI P    Y  L  G  +   +E AL LF E Q+  V +    + + ID  CK+G 
Sbjct: 724 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGK 782

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +IEA ELF  +   K   +I  Y  LID   K+  ++ A +LF  +    ++PN +TY  
Sbjct: 783 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 842

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK----- 547
           ++      G   K   LF DME    A D I + ++   + +  +  +  +LL+K     
Sbjct: 843 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 902

Query: 548 MKEKKVMPDASI--------VSIVVDLLV---KNEISLKS 576
           +K +  + DA I        +S V++LL    K E+SL S
Sbjct: 903 IKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 942



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/575 (27%), Positives = 268/575 (46%), Gaps = 82/575 (14%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G FP L   N L+    K   + L +  +G ++ +   P+  T+ ++IK       ++
Sbjct: 200 SEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVI 259

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +   + ++++   C+PN+ TYN  I GLC+TG    AL + + M     E G+   P+  
Sbjct: 260 KGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM----EKGL--GPDGH 312

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINP---------------------------- 240
           TY+ ++DG CK+    +AK +F  M    +NP                            
Sbjct: 313 TYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372

Query: 241 -------DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD-------- 285
                  +VVTYN++I G+  A +  +A  LF EM+  G++P   T+N+++D        
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDM 432

Query: 286 ---------------------------ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
                                       LC +  + +A+ +LD M++ GV+PN   Y TL
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTL 492

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  +    +   A EL   M + G   D   YN LI G C+ K+VEEA  L  +M  KGI
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI 552

Query: 379 KPTVVTYNTLFLGLF-EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           KP   TY   F+ L+ +  +++ A + F +M   G+  +   YT  I G C  G  +EA+
Sbjct: 553 KPNAHTYGA-FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
             F+ +       DI+AY+ +I  L K+G+ K A  +F       +VP+V  YN +I G 
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLI--HGFIRINEPSKVNELLHKMKEKKVMP 555
           C +G ++KA  L+ +M  N   P+++ ++ LI  +G+ +    ++  +L  +M  K + P
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           D  I  I++D   K E +L+   S   + +Q  VG
Sbjct: 732 DGYIYCILIDGCGK-EGNLEKALSLFHEAQQKSVG 765



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 234/495 (47%), Gaps = 7/495 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           NL  ++I I+ F  +G ++     F   +   F P     N+L++ L   + +     ++
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +      P+V TY  +I   C+ G  +    +  EM          CKPN  TY+  I
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFI 283

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLC+ G VD+A  +   M ++ + PD  TY  L+ G C      EAK +F  M   G+ 
Sbjct: 284 GGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  T+  ++D   K   ++EA R+ D M+ RG++ N  TYN ++ G    G++ +A  L
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   G + D  +YN+LI+GY K+ ++ +A  L  EM ++ + P+  TY+ L  GL  
Sbjct: 404 FNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              ++ A ++ D+M R+GV  +   Y T I    +      A+EL + +       D+  
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YNCLI GLC++ +++ A  L   +    + PN  TY   I      G++  A   F DM 
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
            +   P+ + + +LI G   +    +       M EK ++PD    S ++  L KN  + 
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 575 KSLPSFLVQERQGEV 589
           +++  FL   + G V
Sbjct: 644 EAMGVFLKFLKTGVV 658



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 231/515 (44%), Gaps = 49/515 (9%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCF 106
           + D M+R +   P V  +  L+ +  +   Y+  +       A G+ P+L+ YN LI   
Sbjct: 473 VLDQMIR-NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+  +V    +    +      PNA T+ + I        I  A   F  + + G  PN 
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + Y  LI G C  G+T+ AL+ F+ M     E G++  P+   YS II  L K G   +A
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCML----EKGLI--PDIRAYSAIIHSLSKNGKTKEA 645

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +FL+     + PDV  YNSLI G C   D  +A +L+ EM+  G+ P++V +N ++++
Sbjct: 646 MGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIND 705

Query: 287 L--CKNRKMDEASRLLDLMVQRGVRPNACTY----------------------------- 315
              CK+  + EA +L D M+ +G+ P+   Y                             
Sbjct: 706 YGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG 765

Query: 316 -----NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
                N+L+D FC  GK+  A ELF  M       + V+Y ILI+ Y K + +EEA  L+
Sbjct: 766 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 825

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            +M ++ I P  +TY +L L   +I      + LF +M+  G+A D   Y       CK 
Sbjct: 826 LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 885

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G  +EA++L     +   +L+   ++ LI  LCK  ++    EL   +    L  +  T 
Sbjct: 886 GKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTC 945

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           N ++ G    G  D+A  +   M+     P  ++ 
Sbjct: 946 NTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 980



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 179/422 (42%), Gaps = 72/422 (17%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGL 92
           +G  +V    EA   F  ML      P + +++ ++ SL+KN      +        TG+
Sbjct: 599 KGHCDVGNTVEALSTFKCMLE-KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK--GLHAESRIMEA 150
            P+++ YN LI+ FCK G +      +  +L +   PN   +N+LI   G      + EA
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEA 717

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE--------MANGNGEIGVV 202
             LF ++ + G  P+   Y  LI+G  + G+   AL+LF E        ++  N  I   
Sbjct: 718 FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSF 777

Query: 203 CK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           CK                    PN VTY+ +ID   K   +++A+ LFL M+  NI P+ 
Sbjct: 778 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 837

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           +TY SL+       +  +   LF +M  +G+    + + V+    CK  K  EA +LL+ 
Sbjct: 838 LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN- 896

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
                         +L++G  L                     DDV ++ LI   CK K+
Sbjct: 897 -------------KSLVEGIKL--------------------EDDV-FDALIFHLCKEKQ 922

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +   L L  EM  + +  +  T NTL LG ++    + A K+   MQR G    + + T 
Sbjct: 923 ISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTD 982

Query: 423 FI 424
            I
Sbjct: 983 SI 984



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 60/353 (16%)

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRP-----------------NACTYNTLMDG 321
           +++++   LC +  + +A  +L+ ++Q    P                 N   ++  +D 
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F ++G +N A  +F +  S G     +  N L+    K   +     +Y  MV   I P 
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V TY  +     ++  V     +  EM+++    +  TY  FI GLC+ G + EA+E+ +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP---------------- 485
            +       D   Y  L+DG CK  R K A  +F S+P   L P                
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360

Query: 486 -------------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                              NVVTYN MI G+   G+M KA  LF +M      PD  T++
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYN 420

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-------DLLVKNEI 572
           +LI G+++ ++ +K  ELL +MK +K+ P     S+++       DL   NE+
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEV 473


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 161/544 (29%), Positives = 261/544 (47%), Gaps = 18/544 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
           +A  + D M+R +P+PP      ++L+S+    H     +  G  P     ++L++ + K
Sbjct: 138 QANGLLDQMIRAYPTPP------LVLSSV----HRALSGSDQGRRP--VVLDVLVDTYKK 185

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            GRV  G      +      P+    N L+K L     +     +   ++  G  P+V T
Sbjct: 186 TGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYT 245

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           Y+TLI   C+      A  + EEM     E G  C  N VTY+T+I GLC+ G +++A  
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMR----ETG--CSLNVVTYNTLIGGLCRAGAIEEAFG 299

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
              +M+D  + PD  TY ++I+GLC     ++AK L  EM   G+ P+VV ++ ++D   
Sbjct: 300 YKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFM 359

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +    DEA +++  M   GV+PN  TY+ L+ G C +G++ RA  +   M  +G   D +
Sbjct: 360 RQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTM 419

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN++I G+ +    EEA  L  EM   GI P V TY+ +  GL +I + E A  L ++M
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
             DG+  +   Y   I G C+ G    A E  + +       D+  YN LI GL   G++
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A E +  +      PN  TY  +I G    G ++KA  L   M  +   P+   +  +
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQI 599

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
           + G+ + +   KV+  L  M EK +MPD  +  IV+  L  +     ++    V E+ G 
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659

Query: 589 VGES 592
           V +S
Sbjct: 660 VPDS 663



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 255/581 (43%), Gaps = 78/581 (13%)

Query: 67  VSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++N L+  L +         Y   +   GL P+ +TY  +IN  CK GR         
Sbjct: 278 VVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLD 337

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +  +   PN   +++LI G   +    EA  +  ++ A G +PN ITY+ LI GLC+ G
Sbjct: 338 EMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLG 397

Query: 181 HTMIALNLFEEMANGNGEIGVVC---------------------------------KPNT 207
               A  + ++M     +IG +                                   PN 
Sbjct: 398 RMGRASRILKQMT----KIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNV 453

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TYS II+GLC+ G  ++A  L  QM  + + P+   Y  LI G C    ++ A     +
Sbjct: 454 YTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKK 513

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  + + P +  +N ++  L    KMDEA    D M+++G +PN  TY  L+ G+ + G 
Sbjct: 514 MTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGN 573

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + +AE+L   M + G   +D  Y  ++ GY K+  +E+  S  + M+ KG+ P    Y  
Sbjct: 574 LEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGI 633

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +   L     ++ A+ +   ++++G+  D+  Y + I G CK   + +AV L   +    
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E  I  YN LIDG CKS  +  A  +F S+    L PN VTY  +I G C  G +  A 
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753

Query: 508 DLFLDMEENAAAPD----------------------------------VITFDMLIHGFI 533
           DL+ +M     APD                                  + +F+ L+HGF 
Sbjct: 754 DLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFC 813

Query: 534 RINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDLLVKNEIS 573
           +  +  +  + LH M +K ++P   ++ +IV+ L    ++S
Sbjct: 814 KRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLS 854



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 237/485 (48%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P++YTY+ LI  +CK+  +         +  +  + N  T+N+LI GL     
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I EA     +++ +G  P+  TY  +INGLC+ G    A  L +EM+           PN
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG------LMPN 347

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V YST+IDG  ++G  D+A  +  +M    + P+ +TY++LI GLC       A R+  
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M   G     +T+N++++   +    +EA  LL+ M + G+ PN  TY+ +++G C +G
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +  RA  L   M + G K +   Y  LI+GYC+      A    ++M  + + P +  YN
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L +GL  + +++ A++ +DEM   G   +  TY   I G    G + +A +L   +   
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS 587

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               +   Y  +++G  KS  L+       S+    L+P+   Y I+I  L + G M  A
Sbjct: 588 GLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAA 647

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +   +E+N   PD + +  LI GF +  +  K   LL +M +K + P  S  + ++D 
Sbjct: 648 VSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDG 707

Query: 567 LVKNE 571
             K++
Sbjct: 708 FCKSD 712



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 224/494 (45%), Gaps = 35/494 (7%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGL 92
           EG +      EAF + + M R     P V +++I++  L +    +       ++ A GL
Sbjct: 426 EGHLRQHNKEEAFLLLNEM-RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGL 484

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PN + Y  LI+ +C+ G  SL      ++ R   TP+   +NSLI GL    ++ EA  
Sbjct: 485 KPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            + ++   G +PN  TY  LI+G    G+   A  L  +M N          PN   Y+ 
Sbjct: 545 YYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG------LNPNDFIYAQ 598

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I++G  K   ++K  +    M ++ + PD   Y  +IH L  +     A  +   +   G
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P  + +  ++   CK   M++A  LLD M ++G+ P    YN L+DGFC    I+ A 
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +F S+   G   + V+Y  LI+GYCK  ++ +A+ LY EM+++G+ P    Y+ L  G 
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGC 778

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                ++ AL + +EM   G A    ++ T + G CK G + E V+    +        +
Sbjct: 779 SNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSL 837

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHG--------------------VLVPNVVTYNI 492
                ++ GL ++G+L  A  +F  L                        LVP  V +N 
Sbjct: 838 LTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN- 896

Query: 493 MIQGLCNDGQMDKA 506
           MIQ  C  G +DKA
Sbjct: 897 MIQSHCKQGYLDKA 910



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 32/309 (10%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P+   Y I+I+     G +         I ++   P++  + SLI G    + + +A
Sbjct: 623 GLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKA 682

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNT 207
             L  ++   G EP +  YN LI+G C++     A N+F           ++CK   PN 
Sbjct: 683 VGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNS---------IICKGLPPNC 733

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+T+IDG CK G +  A  L+ +M  E + PD   Y+ L  G  ++ D  +A  +  E
Sbjct: 734 VTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEE 793

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ +G    + +FN ++   CK  K+ E  + L +M+ + + P+  T   ++ G    GK
Sbjct: 794 MIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGK 852

Query: 328 INRAEELFGSMESMGCKHDDVSY-------------------NILINGYCKNKEVEEALS 368
           ++ A  +F  ++     H D  +                   + +I  +CK   +++AL 
Sbjct: 853 LSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDKALM 912

Query: 369 LYREMVSKG 377
           L+  +V+KG
Sbjct: 913 LHDALVAKG 921


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 235/498 (47%), Gaps = 23/498 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN++TYN L+  FC  G+V        ++      P+A T+N LI+G   +  I  A
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 235

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   ++  G   +  TYN LIN LC+ G T  A +LF+ +           KPN VT+
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG------IKPNAVTF 289

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +++I+GLCK G  D A     +M      PD  TY+S I  LC      E      EM+ 
Sbjct: 290 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 349

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + V+PS V + +++ +L K R     +R    MV  G  P+  TY T M  +C+ G++N 
Sbjct: 350 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 409

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE +   M   G   D ++YN L++G+    + + A+S+ ++M S    P   TY  L  
Sbjct: 410 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 469

Query: 391 GLFEIHQVEHALKL-----------------FDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            L  +  VE  L L                 FD M+++    ++ TY++ ++G  ++G  
Sbjct: 470 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 529

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  L   ++     L+   Y  L+   CKS R   AW L CS+     +P +++Y  +
Sbjct: 530 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 589

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           + GL  +GQ DKA+++F++      +PD I + ++I G I+        E++  ++    
Sbjct: 590 LSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNC 649

Query: 554 MPDASIVSIVVDLLVKNE 571
            P     +++ + L   E
Sbjct: 650 RPSHQTYAMLTEELPDRE 667



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 45/492 (9%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++RS + P+A TFNSLI G    +++  A  LF K+   G   +V++Y TLI GLC  G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A+ LF EM           +P+   Y+ ++ GLC     ++   +  +MK+    P 
Sbjct: 61  IDEAVELFGEMD----------QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPS 110

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              Y +++   C      EA+ +  EM ++G+ P VVT   +++  CK  +M +A R+L+
Sbjct: 111 TRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLE 170

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LM  RG +PN  TYN L+ GFC  GK+++A  L   M + G   D V+YN+LI G C + 
Sbjct: 171 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 230

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +E A  L R M   G+     TYN L   L +  + + A  LFD ++  G+  +  T+ 
Sbjct: 231 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFN 290

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK----SGRLKFAWEL--- 474
           + I+GLCK+G    A +    +    C  D   Y+  I+ LCK       L F  E+   
Sbjct: 291 SLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQK 350

Query: 475 --------FCSLPHGVLV--------------------PNVVTYNIMIQGLCNDGQMDKA 506
                   +  + H +L                     P+VVTY   ++  C +G++++A
Sbjct: 351 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 410

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            ++ ++M +N    D + ++ L+ G   I +      +L +M     +P+     I++  
Sbjct: 411 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 470

Query: 567 LVKNEISLKSLP 578
           LV+  +    LP
Sbjct: 471 LVRMRLVEDVLP 482



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 232/524 (44%), Gaps = 25/524 (4%)

Query: 67  VSSFNILLASLAKNKHYDTRLNATGLF--PNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           V S+  L+  L +    D  +   G    P+++ Y  L+   C   R   G +   R+  
Sbjct: 45  VVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKE 104

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
             + P+   + +++     E +  EA  +  ++   G  P V+T   +IN  C+ G    
Sbjct: 105 LGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 164

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           AL + E M          CKPN  TY+ ++ G C EG V KA  L  +M+   +NPD VT
Sbjct: 165 ALRVLELMKLRG------CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVT 218

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN LI G C       A RL   M   G+     T+N +++ LCK+ + D+A  L D + 
Sbjct: 219 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLE 278

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            RG++PNA T+N+L++G C  GK + A +    M S GC  D  +Y+  I   CK K  +
Sbjct: 279 TRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQ 338

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           E LS   EM+ K +KP+ V Y  +   L +        + + EM   G   D  TYTT +
Sbjct: 339 EGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSM 398

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
              C  G + EA  +   +      +D  AYN L+DG    G+   A  +   +     V
Sbjct: 399 RAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV 458

Query: 485 PNVVTYNIMIQ-----------------GLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           PN  TY I+++                 G+    ++     LF  M++N   P+  T+  
Sbjct: 459 PNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSS 518

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++ GF       +   L+  MKE  +  +  I + +V    K++
Sbjct: 519 ILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 562



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 173/358 (48%), Gaps = 11/358 (3%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD  T+NSLI G C  N  + A+ LF +M  +G    VV++  +++ LC+  ++DEA  L
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE---LFGSMESMGCKHDDVSYNILING 356
              M Q    P+   Y  L+ G C      R EE   +   M+ +G +    +Y  +++ 
Sbjct: 68  FGEMDQ----PDMHMYAALVKGLC---NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            C+ ++ +EA  + +EM  KG+ P VVT   +     +  ++  AL++ + M+  G   +
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TY   + G C  G + +A+ L   +R      D   YN LI G C  G ++ A+ L  
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L+ +  TYN +I  LC DG+ D+A  LF  +E     P+ +TF+ LI+G  +  
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 300

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           +     + L KM      PD    S  ++ L K + S + L SF+ +  Q +V  S V
Sbjct: 301 KADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL-SFIGEMLQKDVKPSTV 357


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/439 (32%), Positives = 226/439 (51%), Gaps = 14/439 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK--------HYDTRLNATGLFPNLYTYN 100
           +A  +FD +LR     P + S N  LA +A++         +   R  A+ + P ++TY 
Sbjct: 36  DALDVFDELLRRGIGAP-IRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYG 94

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKA 159
           ILI C C  GR+ LGF A G +++  F      FN L+KGL A+ R  +A  +  + +  
Sbjct: 95  ILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTE 154

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNV ++  ++ GLC    +  AL L   MA+  G     C PN V+YST+ DGL K
Sbjct: 155 LGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGG----CLPNVVSYSTVTDGLLK 210

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G  DKA A + +M D  I P+VVTY+S+I  LC     ++A  +   M+  GV P+  T
Sbjct: 211 GGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFT 270

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +  ++   C + ++ EA + L+ M   GV PN  TY++ MD  C  G+   A ++F SM 
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMV 330

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G K D  +Y+ L++GY     + E   L+  MV   ++P    +NTL     +  +V+
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+ +F +M+  G+  +  TY T I+G CK   +  A+ LF+ +       +   YN ++
Sbjct: 391 EAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIML 450

Query: 460 DGLCKSGRLKFAWELFCSL 478
            GL ++GR   A E +  +
Sbjct: 451 QGLFRTGRTGTAKEFYVQI 469



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 198/422 (46%), Gaps = 14/422 (3%)

Query: 131 AATFNSLIKGLHAESRIMEAAAL--FTKLKAFGCE---PNVITYNTLINGLCRTGHTMIA 185
            A   SL   L   +R   AAA+  F ++   G     P V TY  LI   C  G   + 
Sbjct: 50  GAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLG 109

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINPDVVT 244
                 +     + G   +P  + ++ ++ GLC +   D A  + L+ M +    P+V +
Sbjct: 110 FAALGHVV----KKGFRVEP--IIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFS 163

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           +  ++ GLCH N   EA  L   M D G    P+VV+++ + D L K    D+A      
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYRE 223

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+ R + PN  TY++++   C    +++A E+   M   G   +  +Y  L++G+C + +
Sbjct: 224 MLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + EA+    +M S G++P VVTY++    L +  +   A K+F  M + G+  D  TY++
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSS 343

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + G    G ++E   LF  +     + D   +N LI    K G++  A  +F  + H  
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQG 403

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L PN VTYN +I G C   +M+ A  LF +M  N  +P+ IT+++++ G  R        
Sbjct: 404 LKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAK 463

Query: 543 EL 544
           E 
Sbjct: 464 EF 465


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 235/477 (49%), Gaps = 9/477 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++   N ++       R       +  +L+    P   T+N+L+     E R  EA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 151 AALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           + L  ++  +  GC  N +TYN +I+ L R GH   A  L + M           K ++ 
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-------KASSF 315

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +I  L + GFV K +AL ++M++E I P +VTYN++IHGL  +     A+  F EM
Sbjct: 316 TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM 375

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G+ P ++T+N +++  CK   + EA  LL  + + G+ P   TYNTL+DG+C +G +
Sbjct: 376 RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGL 435

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L   M   GC  D  +Y IL+NG  K + +  A   + EM+SKG++P    YNT 
Sbjct: 436 EEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTR 495

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                 +     A +L + M   G+  DT TY   IDGLCK G + +A +L   +     
Sbjct: 496 ICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGL 555

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D   Y CLI   C+ G L  A +L   +    L P+VVTY I+I   C  G +  A  
Sbjct: 556 QPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYG 615

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            F  M +    P+ IT+++LIH   R           H+M E+ + P+    ++++D
Sbjct: 616 WFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLID 672



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 233/476 (48%), Gaps = 15/476 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT--------RLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P + ++N LL S  K    D              G   N  TYN++I+   + G +    
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLE-NA 299

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                 +R     ++ T+N LI  L     + +  AL  +++  G  P ++TYN +I+GL
Sbjct: 300 AKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL 359

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            ++     A   F EM      +G++  P+ +TY+++++G CK G + +A  L   ++  
Sbjct: 360 LKSEQVEAAQLKFAEMR----AMGLL--PDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + P V+TYN+LI G C      EA+RL  EM++QG  P V T+ ++M+   K R +  A
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
               D M+ +G++P+   YNT +    ++G  ++A +L   M   G   D V+YN++I+G
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDG 533

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK   +++A  L  +MVS G++P  +TY  L     E   +  A KL + M  DG+   
Sbjct: 534 LCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPS 593

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT  I   C+ G +  A   FR +  +  E +   YN LI  LC++GR   A+  F 
Sbjct: 594 VVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFH 653

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            +    L PN  TY ++I G C +G    A  L+ +M +N   PD  T + L  GF
Sbjct: 654 EMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 221/468 (47%), Gaps = 5/468 (1%)

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
           +L   AF  +      P+    N +++ L   +R  +  A++ ++     EP ++TYNTL
Sbjct: 190 TLCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTL 249

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           ++   + G    A  L +EM    G     C  N VTY+ +I  L +EG ++ A  L   
Sbjct: 250 LDSFLKEGRKDEASMLLKEMETQGGG----CLLNDVTYNVVISFLAREGHLENAAKLVDS 305

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+         TYN LI  L       + + L +EM ++G+ P++VT+N I+  L K+ +
Sbjct: 306 MRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQ 364

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           ++ A      M   G+ P+  TYN++++G+C  G +  A  L G +   G     ++YN 
Sbjct: 365 VEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 424

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+GYC+   +EEA  L  EMV +G  P V TY  L  G  ++  +  A + FDEM   G
Sbjct: 425 LIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKG 484

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D   Y T I      G   +A +L   + +     D   YN +IDGLCK+G LK A 
Sbjct: 485 LQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 544

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +L   +    L P+ +TY  +I   C  G + +AR L   M  +   P V+T+ +LIH  
Sbjct: 545 DLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTC 604

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            R            KM +  + P+    ++++  L +   +L +   F
Sbjct: 605 CRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHF 652



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 182/379 (48%), Gaps = 36/379 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N ++  L K++  +        + A GL P+L TYN ++N +CK G +      
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G + R+   P   T+N+LI G      + EA  L  ++   GC P+V TY  L+NG  +
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466

Query: 179 TGHTMIALNLFEEMANGNGE---------------IGVVCK--------------PNTVT 209
             +  +A   F+EM +   +               +G   K              P+TVT
Sbjct: 467 VRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVT 526

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ IIDGLCK G +  AK L ++M  + + PD +TY  LIH  C     +EA++L   M+
Sbjct: 527 YNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMV 586

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+QPSVVT+ +++   C+   +  A      M+  G+ PN  TYN L+   C  G+  
Sbjct: 587 SDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTL 646

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A   F  M   G   +  +Y +LI+G C+     +A+ LY EM   GI P   T+N LF
Sbjct: 647 LAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706

Query: 390 LGLFEIHQVEHALKLFDEM 408
            G F+   + HA++  + +
Sbjct: 707 KG-FDKGHMYHAIEYLENI 724


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 264/549 (48%), Gaps = 56/549 (10%)

Query: 72  ILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
           ++L  L K       +   G+ P+++ YN+++   CK+ R+      F  +++    PN 
Sbjct: 168 VMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNT 227

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL--- 188
            T+N+LI G      I EA     ++K    E N++TYN+L+NGLC +G    A  +   
Sbjct: 228 VTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLE 287

Query: 189 ---------------FEEMANGNGEIGVV----CKPNTVTYSTIIDGLCKEGFVDKAKAL 229
                          F++ +NG G+ G+      + +  TY  +++GLC+ G ++KA+ +
Sbjct: 288 MEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEV 347

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             ++ +  + P  ++YN L++  C   D  +A     +M ++G++P+ +TFN ++ + C+
Sbjct: 348 LAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCE 407

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             ++D A   +  MV++GV P   TYN+L++G+   G   R  E    M+  G K + +S
Sbjct: 408 TGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVIS 467

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  LIN  CK++++ +A  +  +M+ +G+ P    YN L      + +++ A + FDEM 
Sbjct: 468 YGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMI 527

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
           + G+ A   TY T I+GL +NG + +A +LF  +    C  D+  YN LI G  KS   +
Sbjct: 528 QSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQ 587

Query: 470 FAWELFCSL--------------------PHGV--------------LVPNVVTYNIMIQ 495
              EL+  +                      GV              LVP+   YN MI 
Sbjct: 588 KCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIY 647

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
               DG + KA  L   M +     D +T++ LI  ++R    S++  L+  MK K ++P
Sbjct: 648 SYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVP 707

Query: 556 DASIVSIVV 564
                +I++
Sbjct: 708 KVDTYNILI 716



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 255/570 (44%), Gaps = 53/570 (9%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
             +L+   R +T R    +++    AF      L  H S P  S   + L S++K     
Sbjct: 48  LETLISRGRTITARRFLRSLLLTKTAFSSLSE-LHAHVSKPFFSDNLLWLCSVSKMLDEA 106

Query: 85  TRLNAT----GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           T L +T    G  P+  + N L+               F  ++ S   P+A  +   ++ 
Sbjct: 107 TDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQA 166

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
                 + +   L   +   G  P+V  YN ++ GLC+      A  LF+EM   N    
Sbjct: 167 AVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN---- 222

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
               PNTVTY+T+IDG CK G +++A     +MK++N+  ++VTYNSL++GLC +   ++
Sbjct: 223 --MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDD 280

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A+ + +EM   G  P      V  D    N   D+      L   + +R +  TY  L++
Sbjct: 281 AREVLLEMEGSGFLPGGFLSFVFDDH--SNGAGDDG-----LFDGKEIRIDERTYCILLN 333

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G C +G+I +AEE+   +   G     +SYNIL+N YC+  +V++A+    +M  +G++P
Sbjct: 334 GLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEP 393

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
             +T+NT+     E  +V+HA      M   GV+    TY + I+G  + G+ +   E  
Sbjct: 394 NRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFL 453

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ----- 495
             +     + ++ +Y  LI+ LCK  +L  A  +   +    + PN   YN++I+     
Sbjct: 454 DEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSL 513

Query: 496 ------------------------------GLCNDGQMDKARDLFLDMEENAAAPDVITF 525
                                         GL  +G++ KA DLFL M      PDVIT+
Sbjct: 514 SKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITY 573

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           + LI G+ +     K  EL  KMK   + P
Sbjct: 574 NSLISGYAKSVNTQKCLELYDKMKILGIKP 603



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 230/464 (49%), Gaps = 23/464 (4%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TY IL+N  C++GR+        +++ +  TP+  ++N L+     E  + +A     ++
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           +  G EPN IT+NT+I+  C TG    A      M     E GV   P   TY+++I+G 
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV----EKGV--SPTVETYNSLINGY 440

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            ++G   +      +M    I P+V++Y SLI+ LC      +A+ +  +M+ +GV P+ 
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             +N++++  C   K+ +A R  D M+Q G+     TYNTL++G    G++ +AE+LF  
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQ 560

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   GC  D ++YN LI+GY K+   ++ L LY +M   GIKPTV T++ L     +   
Sbjct: 561 MAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRK-EG 619

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V    K+F EM +  +  D   Y   I    ++G +++A+ L + +     + D   YN 
Sbjct: 620 VVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNS 679

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI    +  R+     L   +    LVP V TYNI+I+GLC+    + A   + +M E  
Sbjct: 680 LILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERG 739

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
              +V                S   +L+  ++E+ ++ +A IVS
Sbjct: 740 LLLNV----------------SMCYQLISGLREEGMLREAQIVS 767



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 184/398 (46%), Gaps = 20/398 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN +++   +    D       R+   G+ P + TYN LIN + + G     F  
Sbjct: 393 PNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEF 452

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + ++   PN  ++ SLI  L  + ++++A  +   +   G  PN   YN LI   C 
Sbjct: 453 LDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCS 512

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A   F+EM               VTY+T+I+GL + G V KA+ LFLQM  +  
Sbjct: 513 LSKLKDAFRFFDEMIQSG------IDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NPDV+TYNSLI G   + +  +   L+ +M   G++P+V TF+ ++   C+   +    +
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMDK 625

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M+Q  + P+   YN ++  +   G + +A  L   M   G   D V+YN LI  Y 
Sbjct: 626 MFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL 685

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +++ V E   L  +M +KG+ P V TYN L  GL ++     A   + EM   G+  +  
Sbjct: 686 RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVS 745

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
                I GL + G + EA       +I+  EL I   N
Sbjct: 746 MCYQLISGLREEGMLREA-------QIVSSELSIGGLN 776



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 200/441 (45%), Gaps = 36/441 (8%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  L++ ++  G  P+  + N L+  L  + H    L +F ++ +         +P+ V
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSG------TRPDAV 158

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y   +        +DK   L   M  + + P V  YN ++ GLC      +A++LF EM
Sbjct: 159 AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + + + P+ VT+N ++D  CK   ++EA    + M ++ V  N  TYN+L++G C  G++
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRV 278

Query: 329 NRAEELFGSMESMG----------------------------CKHDDVSYNILINGYCKN 360
           + A E+   ME  G                             + D+ +Y IL+NG C+ 
Sbjct: 279 DDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRV 338

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +E+A  +  ++V  G+ P+ ++YN L     +   V+ A+   ++M+  G+  +  T+
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF 398

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I   C+ G +  A    R +        ++ YN LI+G  + G     +E    +  
Sbjct: 399 NTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PNV++Y  +I  LC D ++  A  +  DM     +P+   ++MLI     +++   
Sbjct: 459 AGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKD 518

Query: 541 VNELLHKMKEKKVMPDASIVS 561
                 +M +  +  DA++V+
Sbjct: 519 AFRFFDEMIQSGI--DATLVT 537



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 174/368 (47%), Gaps = 11/368 (2%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+T + + ++  L      +K  A+F  + D    PD V Y   +       D ++   L
Sbjct: 120 PSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL 179

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M+  G+ PSV  +N+++  LCK R++ +A +L D M+QR + PN  TYNTL+DG+C 
Sbjct: 180 MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCK 239

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +G I  A      M+    + + V+YN L+NG C +  V++A  +  EM   G  P    
Sbjct: 240 VGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPG--- 296

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
                 G       +H+    D+   DG  +  D RTY   ++GLC+ G I +A E+   
Sbjct: 297 ------GFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           L          +YN L++  C+ G +K A      +    L PN +T+N +I   C  G+
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGE 410

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D A      M E   +P V T++ LI+G+ +     +  E L +M +  + P+      
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGS 470

Query: 563 VVDLLVKN 570
           +++ L K+
Sbjct: 471 LINCLCKD 478


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 247/516 (47%), Gaps = 19/516 (3%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAK----NKHYDTR--------LNATGLFPNLYTYN 100
           +F+ M    P PP V ++ I++    K        DTR        +   G  P + TY+
Sbjct: 236 LFEEMKSTGP-PPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
             I   C++G V         ++ +    N   +N++I GL  +  + EA  +  ++K+ 
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+V TY+ LI+G C+ G     L L EEM   N E      P+ V+YS++  GLCK+
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME------PSLVSYSSLFHGLCKK 408

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              D +  +F  +       D   Y+ LI G C   D + A +L  EM+   + P    F
Sbjct: 409 RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++   CK      A    ++M++ G+ P+  T N ++D  C  G++  A  L   M++
Sbjct: 469 ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   +  +YN +IN  CK ++ E AL L+  M+ + + P+VV Y+TL  G  +    + 
Sbjct: 529 QGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQK 588

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL L+  M + GV  D   YT  I+ LC    + EA  LF+ +       D  +Y  +I 
Sbjct: 589 ALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIA 648

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G C+ G ++ AW LF  +     +P VVTY  ++ G C   ++D A  L  +M+     P
Sbjct: 649 GFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITP 708

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           DV+T+++LI    R     K  E+L++MKE  V+PD
Sbjct: 709 DVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 254/508 (50%), Gaps = 18/508 (3%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCK--IGRVSLGFIAFG 120
           S N LL  LA+    +        + +TG  PN++TY I++N +CK   G   +      
Sbjct: 216 SCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQAT 275

Query: 121 RIL----RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
            IL    R+  +P   T+++ I GL     +  A      L +     NV  YN +I+GL
Sbjct: 276 EILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+ G    AL + EEM +     G+   P+  TYS +I G CK+G V+K   L  +MK  
Sbjct: 336 CKKGELDEALKVLEEMKS----CGI--SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYS 389

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           N+ P +V+Y+SL HGLC     + +  +F ++   G +     +++++   C    +D A
Sbjct: 390 NMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSA 449

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            +L++ MV+  + P+   + +L+ GFC MG    A E F  M   G      + N++I+ 
Sbjct: 450 HKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDA 509

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +C+   VEEAL+L  EM ++GI P + TYN +   L +  + E AL+LF  M +  V   
Sbjct: 510 HCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPS 569

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y+T IDG  K     +A+ L+  +  +    D+ AY  LI+ LC   R+  A+ LF 
Sbjct: 570 VVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFK 629

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    + P+ ++Y  +I G C  G M KA  LF +M +    P V+T+  L+ G+ ++N
Sbjct: 630 KMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMN 689

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVV 564
                + L+ +MK K + PD    ++++
Sbjct: 690 RIDIADMLIDEMKRKGITPDVVTYNVLI 717



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 249/497 (50%), Gaps = 18/497 (3%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATG 91
           E DI+     E   I + M R   SP  V +++  +  L +  + ++ L+       A G
Sbjct: 266 EADIDTRQATE---ILEEMERNGESPT-VVTYSTYIYGLCRVGYVESALDFVRSLISANG 321

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L  N+Y YN +I+  CK G +         +     +P+  T++ LI G   +  + +  
Sbjct: 322 LV-NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGL 380

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L  ++K    EP++++Y++L +GLC+   + I+L++F ++    G  G   K +   YS
Sbjct: 381 YLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL----GAAGY--KYDQTAYS 434

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I G C +G +D A  L  +M   N+ PD   + SL+HG C    W  A   F  M++ 
Sbjct: 435 ILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEG 494

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ PS+ T NVI+D  C+  +++EA  L++ M  +G+ PN  TYN +++  C   K  RA
Sbjct: 495 GILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERA 554

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            ELF  M         V Y+ LI+G+ K    ++AL LY  M+  G+ P +V Y  L   
Sbjct: 555 LELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINI 614

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    ++  A  LF +M  +G+  D  +YT+ I G C+ G + +A  LF  +        
Sbjct: 615 LCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPT 674

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  L+DG CK  R+  A  L   +    + P+VVTYN++I      G +DKA ++  
Sbjct: 675 VVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLN 734

Query: 512 DMEENAAAPDVITFDML 528
           +M+EN   PD +T+ ML
Sbjct: 735 EMKENGVLPDHMTYMML 751



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/573 (28%), Positives = 271/573 (47%), Gaps = 32/573 (5%)

Query: 15  SAPISAFRSNFSSLLVH---------FRDLTTREGDINVITPNEAFCIFDYMLRM-HPSP 64
           S  I AFR+  + L +           RD+      +N+    +AF +F  +L     + 
Sbjct: 121 SRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNL----DAFELFPILLESPKDAA 176

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
             V  F++L+   A N   +  ++       TGL  +  + N L+ C  +  R       
Sbjct: 177 RSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSL 236

Query: 119 FGRILRSCFTPNAATFNSLI----KGLHAESRI--MEAAALFTKLKAFGCEPNVITYNTL 172
           F  +  +   PN  T+  ++    KG   E+ I   +A  +  +++  G  P V+TY+T 
Sbjct: 237 FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTY 296

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I GLCR G+   AL+    + + NG + V C      Y+ II GLCK+G +D+A  +  +
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGLVNVYC------YNAIIHGLCKKGELDEALKVLEE 350

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           MK   I+PDV TY+ LIHG C   D  +   L  EM    ++PS+V+++ +   LCK R 
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            D +  +   +   G + +   Y+ L+ GFC+ G ++ A +L   M       D  ++  
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L++G+CK      AL  +  M+  GI P++ T N +        +VE AL L +EMQ  G
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +  TY   I+ LCK      A+ELF  +        +  Y+ LIDG  K    + A 
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L+  +    + P++V Y I+I  LC+  +M +A +LF  M EN   PD I++  +I GF
Sbjct: 591 MLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGF 650

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            RI +  K   L ++M ++  +P     + +VD
Sbjct: 651 CRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 228/485 (47%), Gaps = 21/485 (4%)

Query: 95  NLYTYNILINCFCKIGRVSL-GFIAFGRILRSCFTPNAAT-----FNSLIKGLHAESRIM 148
           ++  Y +L +  C   +V+L  F  F  +L S   P  A      F+ LIK   A S + 
Sbjct: 140 HMEVYALLRDIVCYYNKVNLDAFELFPILLES---PKDAARSVIVFDLLIKVFAANSMLE 196

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  +F + K  G E +  + N L+  L          +LFEEM +          PN  
Sbjct: 197 NAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPP------PNVF 250

Query: 209 TYSTIIDGLCKEGF------VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           TY+ +++  CK  F        +A  +  +M+    +P VVTY++ I+GLC       A 
Sbjct: 251 TYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESAL 310

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
                ++      +V  +N I+  LCK  ++DEA ++L+ M   G+ P+  TY+ L+ GF
Sbjct: 311 DFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGF 370

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G + +   L   M+    +   VSY+ L +G CK +  + +L ++R++ + G K   
Sbjct: 371 CKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQ 430

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
             Y+ L  G      ++ A KL +EM R+ +A D   + + + G CK G  + A+E F  
Sbjct: 431 TAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNM 490

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +        I   N +ID  C+ GR++ A  L   +    + PN+ TYN +I  LC + +
Sbjct: 491 MLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERK 550

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            ++A +LF  M +    P V+ +  LI GF + +   K   L  +M +  V PD    +I
Sbjct: 551 SERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTI 610

Query: 563 VVDLL 567
           ++++L
Sbjct: 611 LINIL 615



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 180/357 (50%), Gaps = 6/357 (1%)

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHAN------DWNEAKRLFIEMMDQGVQPSVVTF 280
           ++LF +MK     P+V TY  +++  C  N      D  +A  +  EM   G  P+VVT+
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           +  +  LC+   ++ A   +  ++      N   YN ++ G C  G+++ A ++   M+S
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   D  +Y+ILI+G+CK  +VE+ L L  EM    ++P++V+Y++LF GL +    + 
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           +L +F ++   G   D   Y+  I G C  G +  A +L   +       D   +  L+ 
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G CK G    A E F  +  G ++P++ T N++I   C +G++++A +L  +M+     P
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP 533

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           ++ T++ +I+   +  +  +  EL   M ++ V+P   + S ++D   K   S K+L
Sbjct: 534 NLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 237/478 (49%), Gaps = 11/478 (2%)

Query: 90  TGLFP-NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           +GLF   LY++N L+    K   V+     + +I  S   P+  TFN++I  L  + ++ 
Sbjct: 155 SGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQ 214

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  +F K+  F   P+  TY +LI G CR      A  +F+ M          C PN+V
Sbjct: 215 EAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG------CNPNSV 268

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TYST+I+GLC EG + +A  +  +M ++ I P V TY   I  LC     ++A  L   M
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G  PSV T+  I+  L +  KM+ A  +   M++ G+ PN  TYN L++  C  G+ 
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF 388

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A ++F  ME  G   +  +YN +I G     ++E+A+ ++ +M+  G  PTVVTYNTL
Sbjct: 389 GIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
            +   +   + +A +    M+      D RTY   I G CK G +  A   F    +LKC
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFF--YEMLKC 506

Query: 449 EL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            +  +   Y  +IDG CK G++  A  LF  +       ++ TYN +I GL    +  +A
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
                 M E    P+ IT+  LI+G  +    +   ++ H+M++K  +P+A   + ++
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLI 624



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 231/438 (52%), Gaps = 6/438 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           +FN+L+  L     +  A  ++ ++ + G +P+++T+NT+IN LC+ G    A+ +F ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              +     +C P+  TY+++I G C+   +DKA  +F +M  +  NP+ VTY++LI+GL
Sbjct: 224 FQFD-----LC-PDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C+     EA  +  EM ++G++P+V T+ V +  LC   ++D+A  L+  M ++G  P+ 
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY  ++ G    GK+  A  ++  M   G   + V+YN LIN  C       AL ++  
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW 397

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G      TYN +  GLF +  +E A+ +F++M +DG +    TY T I    K GY
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           +  A      ++   CE D + Y  LI G CK G+L  A   F  +    + PN  TY  
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           MI G C +G++D A  LF  MEEN  +  + T++ +I G  + N  S+  +   KM E+ 
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577

Query: 553 VMPDASIVSIVVDLLVKN 570
           + P+    + +++ L KN
Sbjct: 578 LQPNTITYTSLINGLCKN 595



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 256/559 (45%), Gaps = 44/559 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           ++AF +FD M++   +P  V+ ++ L+  L         ++        G+ P +YTY +
Sbjct: 249 DKAFEVFDRMVKDGCNPNSVT-YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I+  C IGRV         + +   +P+  T+ ++I GL    ++  A  ++ K+   G
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN +TYN LIN LC  G   IAL +F+ M  G+G +      N  TY+ II GL    
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWM-EGHGTLA-----NAQTYNQIIKGLFGMD 421

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++KA  +F +M  +  +P VVTYN+LI         N A R    M +   +P   T+ 
Sbjct: 422 DIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYC 481

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   CK  K+D A+     M++ G+ PN  TY  ++DG+C  GKI+ A  LF  ME  
Sbjct: 482 ELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEEN 541

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC     +YN +I+G  K     EA     +M  +G++P  +TY +L  GL +      A
Sbjct: 542 GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLA 601

Query: 402 LKLFDEMQR-------------------------------DGVAADTRTYTTFIDGLCKN 430
            K+F EM++                               +G      TY+T + GLC+ 
Sbjct: 602 FKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCRE 661

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G   EA +L   ++       ++ Y  L+   CKS ++  A E+F  +      P++  Y
Sbjct: 662 GRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIY 721

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            ++I  LC   + ++A ++F  + +     D+I + +L+ G ++  +     + L+ M+ 
Sbjct: 722 KVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMES 781

Query: 551 KKVMPDASIVSIVVDLLVK 569
           +   P      I+   L K
Sbjct: 782 RNCTPSLHTYIILARELSK 800



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 229/492 (46%), Gaps = 16/492 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  +++ L +    +       ++   GL PN  TYN LIN  C  GR  +    
Sbjct: 335 PSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKI 394

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +       NA T+N +IKGL     I +A  +F K+   G  P V+TYNTLI    +
Sbjct: 395 FDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLK 454

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A      M   N      C+P+  TY  +I G CK G +D A + F +M    I
Sbjct: 455 RGYLNNATRFLYMMKESN------CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P+  TY ++I G C     + A  LF  M + G   S+ T+N I+  L K  +  EA +
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK 568

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M ++G++PN  TY +L++G C     N A ++F  ME   C  +  +Y  LI G C
Sbjct: 569 FCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLC 628

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  +V+ A      +   G +PT+ TY+TL  GL    +   A +L + M+  G++    
Sbjct: 629 QEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSME 684

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y + +   CK+  +  A+E+F  + +   +  +  Y  LI  LC   R + A  +F SL
Sbjct: 685 IYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSL 744

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  +++ + +++ GL  +G  D        ME     P + T+ +L     ++ + 
Sbjct: 745 LKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKS 804

Query: 539 SKVNELLHKMKE 550
              +++ ++++E
Sbjct: 805 IGTDQIGNRLRE 816



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 17/402 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD--TR----LNATGLFPNLYTYNIL 102
           +A  +F+ ML+  PSP  V ++N L+    K  + +  TR    +  +   P+  TY  L
Sbjct: 425 KAMVVFNKMLKDGPSPT-VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ FCK G++      F  +L+   +PN  T+ ++I G   E +I  A +LF +++  GC
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             ++ TYN +I+GL +      A     +M     E G+  +PNT+TY+++I+GLCK   
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMT----EQGL--QPNTITYTSLINGLCKNTA 597

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            + A  +F +M+ +N  P+  TY SLI+GLC     + A+RL     + G +P++ T++ 
Sbjct: 598 TNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYST 653

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LC+  + +EAS+L++ M ++G+ P+   Y +L+   C   K++ A E+F  M   G
Sbjct: 654 LVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKG 713

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            +     Y +LI   C     EEAL++++ ++ K     ++ +  L  GL +    +  +
Sbjct: 714 FQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCM 773

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           K    M+         TY      L K G  I   ++   LR
Sbjct: 774 KFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLR 815


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 214/401 (53%), Gaps = 36/401 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F+ ML MH +PP V  F  +L  LAK KHY T      ++   G+ PNL T NI
Sbjct: 34  DDAISQFNGMLLMHHTPPIVE-FGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC +G++S  F   G+IL+  + PN  T  +L+KGL  +  + ++     K+ A G
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 162 CEPNVITYNTLINGLCRTGHTMIA---LNLFEEMANG------NGEIGVVCK-------- 204
            + N ++Y TL+NGLC+ G T  A   L + E+ + G      N  I  +CK        
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN +TY+T+I G C  G +  A +L  +M  +NINP+V TY  LI  L
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDAL 272

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EAK L  EM  +G    VVT+  ++D  CKN+ +D+A+ L   M + G++PN 
Sbjct: 273 CKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNK 332

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY  L+DG C  G++  A++LF  +   GC  D  +YN++I G CK   ++EAL++  +
Sbjct: 333 YTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSK 392

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           M   G  P VVT+  +   LF+  + + A KL  EM   G+
Sbjct: 393 MEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 204/395 (51%), Gaps = 6/395 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L    TP    F  ++  L        A +L  +++  G EPN++T N LIN  C 
Sbjct: 40  FNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCH 99

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    + ++  ++      + +  +PNT+T +T++ GLC +G V K+     ++  +  
Sbjct: 100 LGQMSFSFSVLGKI------LKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGF 153

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             + V+Y +L++GLC   +   A +    + D     +VV +N I+D LCK++ ++EA  
Sbjct: 154 QMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYD 213

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M  RG+ PN  TY TL+ GFCL G++  A  L   M       +  +Y ILI+  C
Sbjct: 214 FYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALC 273

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V+EA +L  EM  +G    VVTY +L  G  +   ++ A  LF +M+  G+  +  
Sbjct: 274 KEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKY 333

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  IDGLCK G + +A +LF+ L +  C +D+  YN +I GLCK G L  A  +   +
Sbjct: 334 TYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKM 393

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
                +PNVVT+ I+I+ L    + DKA  L  +M
Sbjct: 394 EDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 205/391 (52%), Gaps = 6/391 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P ++ +  ++  L +  H   A++L ++M     E+  + +PN VT + +I+  C  G +
Sbjct: 50  PPIVEFGEILGYLAKMKHYSTAISLSKQM-----EVKGI-EPNLVTLNILINCFCHLGQM 103

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             + ++  ++      P+ +T  +L+ GLC   +  ++     +++ QG Q + V++  +
Sbjct: 104 SFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTL 163

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++ LCK  +   A + L ++       N   YNT++DG C    +N A + +  M + G 
Sbjct: 164 LNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGI 223

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + ++Y  LI G+C   ++  A SL  EM+ K I P V TY  L   L +  +V+ A  
Sbjct: 224 FPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKN 283

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  EM   G  AD  TYT+ +DG CKN  + +A  LF  ++    + +   Y  LIDGLC
Sbjct: 284 LLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLC 343

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K GRLK A +LF  L       +V TYN+MI GLC +G +D+A  +   ME+N   P+V+
Sbjct: 344 KGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVV 403

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           TF+++I    + +E  K  +LLH+M  K ++
Sbjct: 404 TFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 164/347 (47%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A + F  M   +  P +V +  ++  L     ++ A  L  +M  +G++P++VT N+
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   +M  +  +L  +++ G +PN  T  TLM G CL G++ ++      + + G
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + + VSY  L+NG CK  E   A+   R +        VV YNT+  GL +   V  A 
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
             + EM   G+  +  TYTT I G C  G +  A  L   + +     ++  Y  LID L
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDAL 272

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK G++K A  L   + +     +VVTY  ++ G C +  +DKA  LF+ M+E    P+ 
Sbjct: 273 CKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNK 332

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            T+  LI G  +        +L   +  K    D    ++++  L K
Sbjct: 333 YTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCK 379


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 267/549 (48%), Gaps = 51/549 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++NI+L SL      D        L   GL P+  TY+ L++ F K  R+      
Sbjct: 157 PNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYL 216

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLC 177
              +      P+A  +N+L+ G        +A  ++ +L +  G  PN+ TYN +++GLC
Sbjct: 217 LDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLC 276

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A +++E M   N +      P+ +TY T+I GLC+   VD A  ++ +M    
Sbjct: 277 KLGMFKEAGDVWERMVANNHQ------PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PDVV YNSL+ G CHA    EA + +  M   G++ +V ++N+++  L     +D+A+
Sbjct: 331 LVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKAT 389

Query: 298 RLLDLMVQR-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            L +L+ +   + P+  T++T++ G C  G  N++ ++     + G + D+ SY+ +I+G
Sbjct: 390 DLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISG 449

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK+  +++A+ LY ++     KP    YN L  G  +  +   A++++ +M  +  +  
Sbjct: 450 LCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPT 509

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           T TY T I GLCK    +EA    R +    C LD+  Y  LI GLC+  ++  A  L+ 
Sbjct: 510 TITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWN 569

Query: 477 SL----------PHGVLV--------------------------PNVVTYNIMIQGLCND 500
            +           H +L+                          PNVVTYN ++ G    
Sbjct: 570 QILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYET 629

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G  DKA  L++ + EN   PD+I+++  I G    N   +  +LL++M    ++P A   
Sbjct: 630 GCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITW 689

Query: 561 SIVVDLLVK 569
           +I+V  ++K
Sbjct: 690 NILVRAVIK 698



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 254/491 (51%), Gaps = 19/491 (3%)

Query: 56  YMLRMHPS---PPPVSSFNILLASLAKNKHYDTRLNA-------TGLFPNLYTYNILINC 105
           Y+L   PS    P    +N LL    +N  ++  +          G  PNL TYN++++ 
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDG 274

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK+G        + R++ +   P+  T+ ++I GL   + +  AA +++++   G  P+
Sbjct: 275 LCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPD 334

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           V+ YN+L+ G C  G    A   ++ M+       V    N  +Y+ ++ GL   G VDK
Sbjct: 335 VVIYNSLLKGFCHAGRVGEAWKFWDSMS-------VSGIRNVTSYNIMLKGLFDGGMVDK 387

Query: 226 AKALF-LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           A  L+ L  KD++++PD+VT++++IHGLC     N++ ++  E    G +    +++ ++
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
             LCK+ ++D+A +L + +     +PN+  YN L++GFC   K + A  ++  M    C 
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              ++YN LI+G CK ++  EA    REM+ KG    V TY +L  GL    +++ AL L
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL 567

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL-KCELDIQAYNCLIDGLC 463
           ++++   G+  D   +   I GLC  G + EA +L   ++    C  ++  YN L+DG  
Sbjct: 568 WNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFY 627

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++G    A  L+ ++    LVP++++YN  I+GLC+  +  +   L  +M  +   P  I
Sbjct: 628 ETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAI 687

Query: 524 TFDMLIHGFIR 534
           T+++L+   I+
Sbjct: 688 TWNILVRAVIK 698



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 257/537 (47%), Gaps = 33/537 (6%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINC 105
           TP +   +F  + R+  S P  S    LL  L + +H      +  L        ++++ 
Sbjct: 45  TPPQPL-LFHLLRRLATSSP--SRLPRLLGILPRLRHRPRFSESAAL--------VVLSA 93

Query: 106 FCKIGRVSLGFIAFGRI--LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK--AFG 161
           F +         AF R+     C  P   + N+L+       R  +A A F  L   AFG
Sbjct: 94  FSRALMPDAALAAFRRLPSFLGC-NPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFG 152

Query: 162 --CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIIDG 216
               PN+ TYN ++  LC  G    A+ LF+ +          C+   P+ +TYST++ G
Sbjct: 153 RRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLR---------CRGLAPDRITYSTLMSG 203

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM-DQGVQP 275
             K   +D A  L  +M    + PD V YN+L+ G     ++ +A R++ +++ D G  P
Sbjct: 204 FVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASP 263

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           ++ T+NV++D LCK     EA  + + MV    +P+  TY T++ G C    ++ A  ++
Sbjct: 264 NLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVY 323

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M   G   D V YN L+ G+C    V EA   +  M   GI+  V +YN +  GLF+ 
Sbjct: 324 SEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDG 382

Query: 396 HQVEHALKLFDEMQRD-GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             V+ A  L++ +++D  ++ D  T++T I GLC+ G+  +++++    R    ELD  +
Sbjct: 383 GMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFS 442

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y+ +I GLCK GRL  A +L+  +      PN   YN +I G C   +   A  ++  M 
Sbjct: 443 YSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMA 502

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           EN  +P  IT++ LIHG  +  +  + +    +M EK  M D +    ++  L +++
Sbjct: 503 ENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDK 559



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 249/485 (51%), Gaps = 23/485 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGR--------VSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           G  P + ++N L++ F +  R         SL   AFGR +     PN  T+N +++ L 
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRI----APNLQTYNIMLRSLC 170

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               +  A  LF  L+  G  P+ ITY+TL++G  +      AL L +EM +        
Sbjct: 171 VRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPS------YE 224

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEA 261
            +P+ V Y+ ++ G  + G  +KA  ++ Q+ +D   +P++ TYN ++ GLC    + EA
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEA 284

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             ++  M+    QP ++T+  ++  LC++  +D A+R+   M++ G+ P+   YN+L+ G
Sbjct: 285 GDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKG 344

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK--GIK 379
           FC  G++  A + + SM   G + +  SYNI++ G      V++A  L+ E++ K   + 
Sbjct: 345 FCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLS 402

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P +VT++T+  GL E      +L++ +E +  G   D  +Y++ I GLCK+G + +AV+L
Sbjct: 403 PDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKL 462

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           +  + +   + +   YN LI+G C++ +   A  ++  +      P  +TYN +I GLC 
Sbjct: 463 YEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCK 522

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
             +  +A     +M E     DV T+  LI G  R  +      L +++ +K +  D  +
Sbjct: 523 AEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVM 582

Query: 560 VSIVV 564
            +I++
Sbjct: 583 HNILI 587



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 222/442 (50%), Gaps = 9/442 (2%)

Query: 141 LHAESR-IMEAAAL--FTKLKAF-GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L A SR +M  AAL  F +L +F GC P V ++N L++   R      A   F  +++G 
Sbjct: 91  LSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHG- 149

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
              G    PN  TY+ ++  LC  G +D+A  LF  ++   + PD +TY++L+ G    N
Sbjct: 150 -AFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR-GVRPNACTY 315
             + A  L  EM    VQP  V +N ++    +N + ++A R+ + +V+  G  PN  TY
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N ++DG C +G    A +++  M +   + D ++Y  +I+G C++ +V+ A  +Y EM+ 
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G+ P VV YN+L  G     +V  A K +D M   G+  +  +Y   + GL   G + +
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDK 387

Query: 436 AVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           A +L+  L +      D+  ++ +I GLC+ G    + ++           +  +Y+ MI
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLC DG++D A  L+  +  ++  P+   ++ LI+GF + ++ S    +  +M E    
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507

Query: 555 PDASIVSIVVDLLVKNEISLKS 576
           P     + ++  L K E  L++
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEA 529



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 199/406 (49%), Gaps = 38/406 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++  ++  L ++   D+       +  TGL P++  YN L+  FC  GRV   +  
Sbjct: 298 PDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAW-K 356

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLC 177
           F   +      N  ++N ++KGL     + +A  L+  L K     P+++T++T+I+GLC
Sbjct: 357 FWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC 416

Query: 178 RTGHTMIALNLFEEMANGNGE---------IGVVCK--------------------PNTV 208
             G    +L + EE      E         I  +CK                    PN+ 
Sbjct: 417 EKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSH 476

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+ +I+G C+      A  ++ QM + + +P  +TYN+LIHGLC A  + EA R   EM
Sbjct: 477 IYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREM 536

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +++G    V T+  ++  LC+++K+D A  L + ++ +G++ +   +N L+ G C  GK+
Sbjct: 537 LEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKV 596

Query: 329 NRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + A +L   M E   C  + V+YN L++G+ +    ++A SL+  ++  G+ P +++YNT
Sbjct: 597 DEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNT 656

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
              GL   ++    ++L +EM   G+     T+   +  + K G I
Sbjct: 657 RIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+ TYN L++ F + G        +  IL +   P+  ++N+ IKGL + +R  E   L
Sbjct: 614 PNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQL 673

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
             ++ A G  P  IT+N L+  + + G   I
Sbjct: 674 LNEMLASGIIPTAITWNILVRAVIKYGPIQI 704


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 259/527 (49%), Gaps = 44/527 (8%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A+GL P    Y  LI  +C+   V  G+     + +     +  T+ +++KG+ +   + 
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  +  ++ A GC PNV+ Y TLI    +      A+ + +EM     E G+   P+  
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIF 488

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+++I GL K   +D+A++  ++M +  + P+  TY + I G   A+++  A +   EM
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            + GV P+ V    +++E CK  K+ EA      MV +G+  +A TY  LM+G     K+
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + AEE+F  M   G   D  SY +LING+ K   +++A S++ EMV +G+ P V+ YN L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G     ++E A +L DEM   G+  +  TY T IDG CK+G + EA  LF  +++   
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELF---------CSLPHGVLV--------------- 484
             D   Y  L+DG C+   ++ A  +F          + P   L+               
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788

Query: 485 --------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
                         PN VTYNIMI  LC +G ++ A++LF  M+     P VIT+  L++
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           G+ ++   +++  +  +     + PD  + S++++  +K  ++ K+L
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 237/483 (49%), Gaps = 21/483 (4%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A+G  PN+  Y  LI  F +  R          +      P+   +NSLI GL    R+ 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA +   ++   G +PN  TY   I+G         A    +EM     E GV+  PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
             + +I+  CK+  V +A + +  M D+ I  D  TY  L++GL   +  ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G+ P V ++ V+++   K   M +AS + D MV+ G+ PN   YN L+ GFC  G+I
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG+ P    Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   ++ VE A+ +F    + G A+ T  +   I+ + K G      E+    R++  
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLN--RLMDG 795

Query: 449 ELDI------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
             D         YN +ID LCK G L+ A ELF  + +  L+P V+TY  ++ G     +
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY---DK 852

Query: 503 MDKARDLFLDMEENAAA---PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           M +  ++F   +E  AA   PD I + ++I+ F++    +K   L+ +M  K  + D   
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912

Query: 560 VSI 562
           +SI
Sbjct: 913 LSI 915



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 244/514 (47%), Gaps = 23/514 (4%)

Query: 69  SFNILLASLAKNKHYDTRLNATGLFPNLYTYNILIN------CFC---KIGRVSLGFIAF 119
           ++++L+  L K ++ D    A GL   + ++ I I       C C   K G +      F
Sbjct: 314 TYSLLIDGLLKGRNADA---AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             ++ S   P A  + SLI+G   E  + +   L  ++K      +  TY T++ G+C +
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A N+ +EM      I   C+PN V Y+T+I    +      A  +  +MK++ I 
Sbjct: 431 GDLDGAYNIVKEM------IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD+  YNSLI GL  A   +EA+   +EM++ G++P+  T+   +    +  +   A + 
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M + GV PN      L++ +C   K+  A   + SM   G   D  +Y +L+NG  K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N +V++A  ++REM  KGI P V +Y  L  G  ++  ++ A  +FDEM  +G+  +   
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + G C++G I +A EL   + +     +   Y  +IDG CKSG L  A+ LF  + 
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVP+   Y  ++ G C    +++A  +F    +   A     F+ LI+   +  +  
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 540 KVNELLHKMKEKKV----MPDASIVSIVVDLLVK 569
              E+L+++ +        P+    +I++D L K
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 238/535 (44%), Gaps = 47/535 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLY-------------TYNILINCFCKIGR 111
           P +S   +LL +L        R N   LF ++Y             TY++LI   C+ G 
Sbjct: 184 PRLSRCKVLLDAL-------LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN 236

Query: 112 VSLG---FIAFGRILRSC------------------FTPNAATFNSLIKGLHAESRIMEA 150
           V LG        +  R+                     P   T++ LI GL    R+ +A
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +L  ++ + G   +  TY+ LI+GL +  +   A  L  EM +     G+  KP    Y
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH----GINIKP--YMY 350

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
              I  + KEG ++KAKALF  M    + P    Y SLI G C   +  +   L +EM  
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + +  S  T+  ++  +C +  +D A  ++  M+  G RPN   Y TL+  F    +   
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +   M+  G   D   YN LI G  K K ++EA S   EMV  G+KP   TY     
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  E  +   A K   EM+  GV  +    T  I+  CK   +IEA   +R++       
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILG 590

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D + Y  L++GL K+ ++  A E+F  +    + P+V +Y ++I G    G M KA  +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +M E    P+VI ++ML+ GF R  E  K  ELL +M  K + P+A     ++D
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 218/485 (44%), Gaps = 59/485 (12%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N L+  L+K K  D        +   GL PN +TY   I+ + +    +     
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DK 543

Query: 119 FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           + + +R C   PN      LI     + +++EA + +  +   G   +  TY  L+NGL 
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +      A  +F EM  G G       P+  +Y  +I+G  K G + KA ++F +M +E 
Sbjct: 604 KNDKVDDAEEIFREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P+V+ YN L+ G C + +  +AK L  EM  +G+ P+ VT+  I+D  CK+  + EA 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC-------------- 343
           RL D M  +G+ P++  Y TL+DG C +  + RA  +FG+ +  GC              
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776

Query: 344 -------------------------KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
                                    K +DV+YNI+I+  CK   +E A  L+ +M +  +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            PTV+TY +L  G  ++ +      +FDE    G+  D   Y+  I+   K G   +A+ 
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896

Query: 439 LFRTLRILK-----CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
           L   +         C+L I     L+ G  K G ++ A ++  ++     +P+  T   +
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956

Query: 494 IQGLC 498
           I   C
Sbjct: 957 INESC 961



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 209/465 (44%), Gaps = 20/465 (4%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           + +   F  L  G  A+  I EA  +F+        P +     L++ L R       L+
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           LF ++  G  E  VV   +  TY  +I   C+ G V   K +  + + E       T N 
Sbjct: 204 LFWDVYKGMVERNVVF--DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF---RTATLN- 257

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            + G         A +L   M+ +G+ P   T++V++D LCK +++++A  LL  M   G
Sbjct: 258 -VDG---------ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           V  +  TY+ L+DG       + A+ L   M S G       Y+  I    K   +E+A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +L+  M++ G+ P    Y +L  G      V    +L  EM++  +     TY T + G+
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C +G +  A  + + +    C  ++  Y  LI    ++ R   A  +   +    + P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             YN +I GL    +MD+AR   ++M EN   P+  T+   I G+I  +E +  ++ + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           M+E  V+P+  + + +++   K E  +++  ++     QG +G++
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 158/330 (47%), Gaps = 17/330 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNI 101
            +A  IFD M+      P V  +N+LL        + K K     ++  GL PN  TY  
Sbjct: 644 QKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+ +CK G ++  F  F  +      P++  + +L+ G    + +  A  +F   K  G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-G 761

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  +   +N LIN + + G T +   +   + +G+       KPN VTY+ +ID LCKEG
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--FDRFGKPNDVTYNIMIDYLCKEG 819

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ AK LF QM++ N+ P V+TY SL++G        E   +F E +  G++P  + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNAC-----TYNTLMDGFCLMGKINRAEELFG 336
           VI++   K     +A  L+D M  +    + C     T   L+ GF  +G++  AE++  
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939

Query: 337 SMESMGCKHDDVSYNILINGYC--KNKEVE 364
           +M  +    D  +   LIN  C   N+ VE
Sbjct: 940 NMVRLQYIPDSATVIELINESCISSNQRVE 969



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 147/349 (42%), Gaps = 52/349 (14%)

Query: 227 KALFLQMKDENINPDVVTYNSL-IHGLCHANDWNE---AKRLFIEMMDQGVQPSVVTFNV 282
           +A FL  +  ++N + ++  S  I G+    +W +   +  L IE     + P VV    
Sbjct: 15  RANFLLFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIE-----INPEVVL--- 66

Query: 283 IMDELCKNRKMDEASRLLDLM----VQRGVRPNACTYNTLMDGFCLMGKINRA------- 331
               + +++++D+ S+LL        Q+       +++ L    C  G   +A       
Sbjct: 67  ---SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM 123

Query: 332 -------EELFGSM-----ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
                   E++ S+     E +G   D V + IL +GY     +EEA+ ++   +   + 
Sbjct: 124 IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELV 183

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P +     L   L   ++++    ++  M    V  D +TY   I   C+ G     V+L
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG----NVQL 239

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            + + + K E + +     +D     G LK    + C      LVP   TY+++I GLC 
Sbjct: 240 GKDV-LFKTEKEFRTATLNVD-----GALKLKESMICK----GLVPLKYTYDVLIDGLCK 289

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             +++ A+ L ++M+    + D  T+ +LI G ++         L+H+M
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 21/179 (11%)

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G + D   +    DG    GYI EAV +F +   L+    +     L+D L +  RL   
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE---------------- 515
           W+++  +    +V +V TY+++I   C  G +   +D+    E+                
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 516 -----NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                    P   T+D+LI G  +I        LL +M    V  D    S+++D L+K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/577 (29%), Positives = 264/577 (45%), Gaps = 85/577 (14%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNL------YTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N+L+  L KN      +    +  N+       TY  L+  FC++  + +       ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R  F P+ A  + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  LF+EMA G G      +PN VTY+ +I  LCK G ++ A  LF +M+D+ I   V 
Sbjct: 356 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV------------------------- 278
            YNSLI+G C     + A+ L   M+ +G+ P+                           
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM 469

Query: 279 ----------TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                     TF  +++  CK++KMDEA+RL D M+   V PN  T+N +++G+CL+G I
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA---------------------- 366
            +A +L+  M  MG K D+ +Y  LI+G C    V +A                      
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589

Query: 367 -------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
                          L+ EM  +G+K  +V++  +     + H  E +  LF EM+  GV
Sbjct: 590 LYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   YT  ID L K   +I+A+  +  + I     +   +  LI+ LCKSG L  A E
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA-E 708

Query: 474 LFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           L C  +  G ++PN  TYN  +     +G M+KA+DL   M +   A  +++F++LI G 
Sbjct: 709 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGL 767

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  +  +L+ K+ E    PD    S ++  L K
Sbjct: 768 CKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCK 804



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 153/514 (29%), Positives = 250/514 (48%), Gaps = 42/514 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L   G+ PN++ YN LI+  CK  R       F  +      PN  T+  LI  L    
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I +A  LF K++  G +  V  YN+LING C+ G    A  L   M            P
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------LTP 441

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              +YS +I GLC+ G +  A  L  +M +  I  +  T+ +LI+G C     +EA RLF
Sbjct: 442 TAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M+D  V P+ VTFNV+++  C    + +A +L D MV+ G++P+  TY +L+ G CL 
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561

Query: 326 GKINRAEE-----------------------------------LFGSMESMGCKHDDVSY 350
             +++A E                                   L+  M   G K D VS+
Sbjct: 562 SGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSF 621

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            I++    K  + E++  L+REM  +G+KP  + Y  +   L +   +  AL  +D+M  
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVI 681

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           DG + +T T+T  I+ LCK+GY+  A  L + +       +   YNC +D     G ++ 
Sbjct: 682 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +L  ++  G L  ++V++NI+I+GLC  G++ +A DL   + E+  +PD I++  +IH
Sbjct: 742 AKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIH 800

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              ++ + +K  EL ++M  K + PD    +I +
Sbjct: 801 ELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 244/488 (50%), Gaps = 6/488 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G+  + Y Y   I  +C+   +        R+       +A  +N L+ GL    R+ E
Sbjct: 192 SGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQE 251

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +   +   G   + +TY TL+ G CR     +AL +  +M      +G V  P+   
Sbjct: 252 AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEAN 305

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            S +ID L K+  V++A +L  ++ D  + P+V  YN+LI  LC    +++A RLF EM 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P+ VT+ +++  LCK   +++A  L D M  +G++     YN+L++G+C  G ++
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  L   M   G      SY+ LI G C+N ++  A+ L+REM  +GI     T+  L 
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALI 485

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +++ A +LFD+M    V  +  T+   I+G C  G I +A +L+  +  +  +
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  LI GLC +  +  A E    L +   V N  +   ++ GL  +G+  +   L
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHL 605

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +M       D+++F ++++  ++ ++  K   L  +MKE+ V PD    + ++D L K
Sbjct: 606 WDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 665

Query: 570 NEISLKSL 577
            E  +++L
Sbjct: 666 EENMIQAL 673



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 239/500 (47%), Gaps = 8/500 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           ++G+  N YT + ++    KI + +L    F ++L+S    +   + + I+  + ESR +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRA-YCESRNL 214

Query: 149 EAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           + A  L  ++++ G + + + YN L+ GLC+      A+ +   M N    IGV    + 
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN----IGVTA--DE 268

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY T++ G C+   ++ A  +   M      P     + +I  L       EA  L  +
Sbjct: 269 VTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACK 328

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           + D G+ P+V  +N ++D+LCKN + D+A RL   M  RG+ PN  TY  L+   C  G 
Sbjct: 329 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I  A  LF  M   G K     YN LINGYCK   ++ A  L   MV +G+ PT  +Y+ 
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL     +  A++L  EM   G+A +  T+T  I+G CK+  + EA  LF  +    
Sbjct: 449 LIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   +N +I+G C  G ++ A++L+  +    L P+  TY  +I GLC    + KA 
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +   D+E + A  +  +   L++G  R    ++   L  +M  + V  D    +I+V   
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628

Query: 568 VKNEISLKSLPSFLVQERQG 587
           +K     KS   F   + QG
Sbjct: 629 LKQHDKEKSCVLFREMKEQG 648



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 235/542 (43%), Gaps = 81/542 (14%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L KN+ +D        +   GL PN  TY ILI+  CK G +      
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++           +NSLI G   +  +  A  L + +   G  P   +Y+ LI GLCR
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ L  EMA    E G+    N  T++ +I+G CK+  +D+A  LF +M D N+
Sbjct: 456 NGDLSSAMELHREMA----ERGIAW--NNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC---------- 288
            P+ VT+N +I G C   +  +A +L+ +M++ G++P   T+  ++  LC          
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569

Query: 289 -------------------------KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                                    +  +  E   L D M  RGV+ +  ++  ++    
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                 ++  LF  M+  G K DD+ Y  +I+   K + + +AL+ + +MV  G  P  V
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTV 689

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID------------------ 425
           T+  L   L +   +  A  L  EM    V  +  TY  F+D                  
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 426 ----------------GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                           GLCK G I EA++L R +       D  +Y+ +I  LCK G + 
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+EL+  + +  L P+VV YNI I+     G+ DKA  ++ +M  +   P+  T+  L+
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 530 HG 531
            G
Sbjct: 870 SG 871



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 211/439 (48%), Gaps = 13/439 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +S++ L+A L +N    +       +   G+  N YT+  LIN FCK  ++      
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++ S   PN  TFN +I+G      I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           T     A     ++ N    +      N  + + ++ GL +EG   +   L+ +M    +
Sbjct: 561 TSGVSKANEFVADLENSYAVL------NNFSLTALLYGLFREGRFTETYHLWDEMAVRGV 614

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D+V++  +++     +D  ++  LF EM +QGV+P  + +  ++D L K   M +A  
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D MV  G  PN  T+  L++  C  G +  AE L   M +     +  +YN  ++ + 
Sbjct: 675 CWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++E+A  L+  M+ +G   ++V++N L  GL +  +++ A+ L  ++   G + D  
Sbjct: 735 TEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCI 793

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y+T I  LCK G I +A EL+  +     + D+ AYN  I      G    A  ++ ++
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 479 PHGVLVPNVVTYNIMIQGL 497
               + PN  TY  ++ G+
Sbjct: 854 IRSGVQPNWDTYRALLSGI 872



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 179/386 (46%), Gaps = 49/386 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNI------LLASLAKNKHYDTRLNATGLFPNLYTYNI 101
           +EA  +FD M+  +  P  V+ FN+      L+ ++ K      ++   GL P+ YTY  
Sbjct: 495 DEAARLFDKMIDSNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------------ 149
           LI+  C    VS        +  S    N  +  +L+ GL  E R  E            
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRG 613

Query: 150 -----------------------AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
                                  +  LF ++K  G +P+ I Y  +I+ L +  + + AL
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           N +++M            PNTVT++ +I+ LCK G++  A+ L  +M   N+ P+  TYN
Sbjct: 674 NCWDQMVIDG------YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
             +       D  +AK L   M+ QG   S+V+FN+++  LCK  K+ EA  L+  + + 
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITES 786

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+  +Y+T++   C MG IN+A EL+  M   G K D V+YNI I     + E ++A
Sbjct: 787 GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGL 392
           L +Y  M+  G++P   TY  L  G+
Sbjct: 847 LGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 145/302 (48%)

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G+  +  T + I+  L K R+   A  L D M+Q GV  +   Y   +  +C    +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   + ++E AL++  +M R G        +  ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             ++ AYN LID LCK+ R   A  LF  +    L PN VTY I+I  LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  M +      V  ++ LI+G+ +     +   LL  M ++ + P A+  S ++  L 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 569 KN 570
           +N
Sbjct: 455 RN 456



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 40/278 (14%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           H    +   G+  +L ++ I++    K        + F  +      P+   +  +I  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
             E  +++A   + ++   G  PN +T+  LIN LC++G+   A  L +EM  GN     
Sbjct: 664 SKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN----- 718

Query: 202 VCKPNTVTYSTIID----------------------------------GLCKEGFVDKAK 227
              PN  TY+  +D                                  GLCK G + +A 
Sbjct: 719 -VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAI 777

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  ++ +   +PD ++Y+++IH LC   D N+A  L+ EM+ +G++P VV +N+ +   
Sbjct: 778 DLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             + + D+A  +   M++ GV+PN  TY  L+ G  LM
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 162/518 (31%), Positives = 247/518 (47%), Gaps = 53/518 (10%)

Query: 67  VSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCF-------------- 106
           V + N LL   A+ K +    N      AT   P++ T+N+LI  +              
Sbjct: 59  VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118

Query: 107 ----------------------CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
                                 CK G+V      F     +  T +  T+ +++  L   
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKN 178

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            +I +A AL  K+ A GC P + TYN L+NGLC+ G    A++L  ++ + NG     C 
Sbjct: 179 KKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CT 232

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ VTY+++IDGL KE    +A  LF +M    +  D V Y +LI GL  A    +A  +
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           +  M  QG  P VVT + ++D LCK  ++  A R+   M  RG+ PN   Y+ L+ G C 
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K++ A E+   M+   C  D ++YNILI+G CK+ +VE A + + EM+  G KP V T
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 412

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L  G  +    + A  +FD+M     + +  TY T I GLCK   + +A   F+ ++
Sbjct: 413 YNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMK 472

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  D   Y+ L+DGLCKSG+L+    LF  +     V N  T   +I  LC   ++D
Sbjct: 473 ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVD 531

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           +A  LF  + +    P    ++ +I   I+    +KVN
Sbjct: 532 EAVSLFNAIRKE-GMPHPYAYNSIISTLIK---SAKVN 565



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 239/483 (49%), Gaps = 7/483 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   +++T N L++ F +  R           L + F P+  T+N LI G        EA
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 151 AALFTKLKA-FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
            A+  +++  +G  P++ T+N +++GLC++G  + A++ FE     NG     C  +  T
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT-NG-----CTIDIHT 167

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ I+D L K   +  A AL  ++      P + TYN+L++GLC      EA  L  +++
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 227

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D G  P VVT+  ++D L K ++  EA +L   M  RG+  +   Y  L+ G    GKI 
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A  ++ +M S GC  D V+ + +I+G CK   +  A+ +++ M ++G+ P  V Y+ L 
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  +++ AL++  +M++     DT TY   IDGLCK+G +  A   F  +    C+
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+  YN L+ G CK+G    A  +F  +      PNVVTY  +I GLC   Q+ KA   
Sbjct: 408 PDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  M+E    PD   +  L+ G  +  +      L  +M+   V    +   ++  L   
Sbjct: 468 FQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKA 527

Query: 570 NEI 572
           N +
Sbjct: 528 NRV 530



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 205/429 (47%), Gaps = 7/429 (1%)

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           FG + +V T N L++   RT     A NL +       E+     P+  T++ +I G C 
Sbjct: 53  FGFQHSVHTGNALLDVFARTKRHREAGNLLKN------ELATTFLPDVETWNVLITGYCL 106

Query: 220 EGFVDKAKALFLQMK-DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
               ++A A+  +M+ D  + P + T+N ++HGLC +     A   F      G    + 
Sbjct: 107 AREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIH 166

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+  I+D L KN+K+ +A  L++ +   G  P   TYN L++G C MG++  A +L   +
Sbjct: 167 TYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 226

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              GC  D V+Y  LI+G  K K   EA  L++EM  +G+    V Y  L  GL +  ++
Sbjct: 227 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKI 286

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A  ++  M   G   D  T +T IDGLCK G I  AV +F+++       +   Y+ L
Sbjct: 287 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 346

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I GLCK+ ++  A E+   +      P+ +TYNI+I GLC  G ++ AR  F +M E   
Sbjct: 347 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 406

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            PDV T+++L+ GF +         +   M      P+      ++  L K     K+  
Sbjct: 407 KPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASL 466

Query: 579 SFLVQERQG 587
            F   + +G
Sbjct: 467 YFQHMKERG 475



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 3/242 (1%)

Query: 331 AEELFGSMES--MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           A ELF  + S   G +H   + N L++ + + K   EA +L +  ++    P V T+N L
Sbjct: 41  AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVL 100

Query: 389 FLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
             G     + E A  +  EM+ D GVA   +T+   + GLCK+G ++ A++ F T     
Sbjct: 101 ITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNG 160

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C +DI  Y  ++D L K+ +++ A  L   +      P + TYN ++ GLC  G++++A 
Sbjct: 161 CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           DL   + +N   PDV+T+  LI G  +     +  +L  +M  + ++ D    + ++  L
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGL 280

Query: 568 VK 569
           ++
Sbjct: 281 LQ 282


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 224/444 (50%), Gaps = 6/444 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G  PN   YN+LI+ +C+ G V  G +  G +      P   T+ +L+  L  +  + 
Sbjct: 287 GAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLE 346

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           + A+L ++++     PNV  YN++I+ LC+      AL + ++M  G       C P+ +
Sbjct: 347 KIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG------CDPDAI 400

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T+ST+I GLC+EG V +A+ L  +     +NP++ +Y SLIHG C   +   A  L +EM
Sbjct: 401 TFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEM 460

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           M++G  P VVTF  ++  L    ++ EA  + + M  R + P+A  YN L+ G C    +
Sbjct: 461 MERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKML 520

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L   M       D   Y  LI+G+ +N+ ++EA  ++  M  KGI P VV YN +
Sbjct: 521 PAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAM 580

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +   +  A++    M++ G   D  TYTT I G  K G I  A+ L   +   +C
Sbjct: 581 IKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRC 640

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + ++ AY+ LI+G CK G    A  LF S+    L PNV+TY I+I  L    ++ +A  
Sbjct: 641 QPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAM 700

Query: 509 LFLDMEENAAAPDVITFDMLIHGF 532
            F  M  N  +P+  T   L+ G 
Sbjct: 701 YFEYMLLNQCSPNDYTLHSLVTGL 724



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 242/530 (45%), Gaps = 29/530 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L++ L +    +      + +    L PN+  YN +I+  CK    S   + 
Sbjct: 327 PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++      P+A TF++LI GL  E R+ EA  L  +   +   PN+ +Y +LI+G C 
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  ++A NL  EM            P+ VT+  +I GL   G V +A  +  +M    +
Sbjct: 447 RGEVIVASNLLVEMMERGH------TPDVVTFGALIHGLVVAGQVSEALLVREKMAARQL 500

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD   YN LI GLC       A+ L  EM++Q V P    +  ++D   +N  +DEA +
Sbjct: 501 LPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARK 560

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M Q+G+ P+   YN ++ G+C  G +N A E   +M  +G   D+ +Y  LI GY 
Sbjct: 561 IFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYA 620

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +  ALSL  +M+ +  +P VV Y++L  G  ++   + A  LF  M+  G+  +  
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS------------- 465
           TYT  I  L K   ++ A   F  + + +C  +    + L+ GLC S             
Sbjct: 681 TYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740

Query: 466 ---GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
              G+     ++F +L +    P    YN +I  LC    + +A DL   M      PD 
Sbjct: 741 NLHGKGAL-LDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDS 799

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            TF  L++GF  + +  +   +L    ++  +  AS   I+ D  V   +
Sbjct: 800 ATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILFDQYVVKSV 849



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 210/435 (48%), Gaps = 6/435 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           +++GL  E  + +   L       GC PN + YN LI+G CR G     + L  EM    
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEM-EAK 323

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           G +     P  VTY T++  L ++G ++K  +L  +M++  + P+V  YNS+I  LC   
Sbjct: 324 GLL-----PTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCR 378

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             ++A  +  +M   G  P  +TF+ ++  LC+  ++ EA RLL    +  + PN  +Y 
Sbjct: 379 SASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYT 438

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +L+ GFC+ G++  A  L   M   G   D V++  LI+G     +V EAL +  +M ++
Sbjct: 439 SLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAAR 498

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            + P    YN L  GL +   +  A  L +EM    V  D   YTT IDG  +N  + EA
Sbjct: 499 QLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEA 558

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            ++F  +       D+  YN +I G C+ G +  A E   ++     +P+  TY  +I G
Sbjct: 559 RKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGG 618

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               G +  A  L  DM +    P+V+ +  LI+G+ ++ +      L   M+ + + P+
Sbjct: 619 YAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPN 678

Query: 557 ASIVSIVVDLLVKNE 571
               +I++  L K +
Sbjct: 679 VITYTILIGSLFKKD 693



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 156/302 (51%)

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G  P     N ++  L + R+ D+A +L D M+      +  +   ++ G CL G + +
Sbjct: 218 HGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEK 277

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
             +L  +    GC  + V YN+LI+GYC+  +V   + L  EM +KG+ PTVVTY TL  
Sbjct: 278 GLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMS 337

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L     +E    L  EM+   +  + + Y + ID LCK     +A+ + + +    C+ 
Sbjct: 338 WLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDP 397

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   ++ LI GLC+ GR++ A  L        L PN+ +Y  +I G C  G++  A +L 
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           ++M E    PDV+TF  LIHG +   + S+   +  KM  ++++PDA+I ++++  L K 
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKK 517

Query: 571 EI 572
           ++
Sbjct: 518 KM 519



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 185/420 (44%), Gaps = 4/420 (0%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           ++ L+  L R G          +M+       V   P       ++      G   KA  
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAV---PTRACLGALVATYADAGMEAKAAE 209

Query: 229 LFLQMKDENIN-PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           +  + ++ +   P     N L+  L     W++A++L+ EM+ +       +  V++  L
Sbjct: 210 MCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGL 269

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C    +++  +L++     G  PNA  YN L+DG+C  G + R   L G ME+ G     
Sbjct: 270 CLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTV 329

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+Y  L++   +  ++E+  SL  EM  + + P V  YN++   L +      AL +  +
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M   G   D  T++T I GLC+ G + EA  L R     +   ++ +Y  LI G C  G 
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A  L   +      P+VVT+  +I GL   GQ+ +A  +   M      PD   +++
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LI G  +         L+ +M E+ V PD  + + ++D  ++NE   ++   F   E++G
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 152/333 (45%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A+ L+ +M  E    D  +   ++ GLC      +  +L       G  P+ V +NV+
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D  C+   +     LL  M  +G+ P   TY TLM      G + +   L   M     
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +   YN +I+  CK +   +AL + ++M + G  P  +T++TL  GL +  +V+ A +
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  E  R  +  +  +YT+ I G C  G +I A  L   +       D+  +  LI GL 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            +G++  A  +   +    L+P+   YN++I GLC    +  AR+L  +M E    PD  
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            +  LI GFIR     +  ++   M++K + PD
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPD 573


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/375 (37%), Positives = 203/375 (54%), Gaps = 39/375 (10%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIG 110
           MLRM P PP +  F+ LL S+ + KHY T      ++++ G+  N YT NILIN FC + 
Sbjct: 1   MLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 59

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           R+   F   G IL+  + P+ ATF +LI+GL  E +I EA  LF K+   G +P+V+TY 
Sbjct: 60  RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119

Query: 171 TLINGLCRTGHTMIALNLFEEM-ANG--------NGEIGVVC------------------ 203
           TLINGLC+      AL+LF +M A G        +  I  +C                  
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179

Query: 204 --KPNTVTYSTIIDGLCKEGFV---DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
              P+ +T++T++D LCKEG +   DKA  LF +M  + + PD VTYN+LIHGLCH    
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
            +A  LF EM+  G  P +VT+ ++ D LCKN ++ EA  LL ++    + P+   Y+ +
Sbjct: 240 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 299

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           MDG C  G++  A +LF  + S G   D  +Y I+ING C+   + EA  L+ EM    I
Sbjct: 300 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359

Query: 379 KPTVVTYNTLFLGLF 393
           +         F G+F
Sbjct: 360 ESYSTFSRNAFKGIF 374



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 183/352 (51%), Gaps = 3/352 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V +S ++  + +        +L+ QM    I  +  T N LI+  CH N    A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             +++  G QPS  TF  ++  LC   K+ EA +L D M   G +P+  TY TL++G C 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             ++  A  LF  M + G   ++ +Y+ LI+G C     +EA+ L+  M+ + I P  +T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 385 YNTLFLGLFE---IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           +NTL   L +   I  ++ A+ LF+EM + G+  DT TY T I GLC  G + +A+ LF 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            + +     D+  Y  L D LCK+ RL  A  L   +    L P++  Y+I++ G+C  G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +++ ARDLF  +      PDV T+ ++I+G  +    ++ ++L  +M E  +
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 187/359 (52%), Gaps = 9/359 (2%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P +V ++ L+  +     ++    L+ +M   G+  +  T N++++  C   ++  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L  +++ G +P+  T+ TL+ G C+ GKI  A +LF  M   G + D ++Y  LING CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           ++++ EALSL+ +M++KGI P   TY++L  GL  +   + A++LF  M    +  D  T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 420 YTTFIDGLCKNGYII---EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           + T +D LCK G I    +A+ LF  +       D   YN LI GLC  GRL+ A  LF 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +     +P++VTY I+   LC + ++ +A  L   +E     PD+  + +++ G  R  
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNVK 595
           E     +L  K+  K + PD    +I+++ L +  +  ++   F      GE+ E++++
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF------GEMDENDIE 360


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 163/508 (32%), Positives = 248/508 (48%), Gaps = 29/508 (5%)

Query: 58  LRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
            R+ P P    S N LL  L+K      ++ +   + A G+  +++TYNI+I+  CK G 
Sbjct: 15  FRVFPKP---RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGD 71

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           + +    F ++  + FTP+  T+NSLI G      + E   +F ++K   C+P+VITYN 
Sbjct: 72  LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 131

Query: 172 LINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           LIN  C+      A     EM ANG        KPN VTYST ID  CKEG + +A   F
Sbjct: 132 LINCFCKFERMPKAFEFLHEMKANG-------LKPNVVTYSTFIDAFCKEGMLQEAIKFF 184

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           + M+   + P+  TY SLI   C A +  EA +L  E++  G++ +VVT+  ++D LC+ 
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            +M EA  +   M+  GV PN  TY  L+ GF    ++  A+++   M+    K D + Y
Sbjct: 245 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 304

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             ++ G C    +EEA  L  E+   GI    V Y TL    F+  Q   AL L +EM  
Sbjct: 305 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM-- 362

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
                        +DGLCKN     A +LF  +       D  AY  LIDG  K G L+ 
Sbjct: 363 ----------LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 412

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  L   +    +  ++  Y  +I GL + GQ+ KAR+L  +M      PD + +  LI 
Sbjct: 413 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +  + +  +  EL ++M ++ ++   S
Sbjct: 473 KYYALGKVDEALELQNEMAKRGMITGLS 500



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 239/468 (51%), Gaps = 18/468 (3%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           +FP   + N L++   K+GR  L    F  +  +    +  T+N +I  L  E  +  A 
Sbjct: 17  VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMAR 76

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           +LFT++K  G  P+++TYN+LI+G  + G     + +FE+M + +      C P+ +TY+
Sbjct: 77  SLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD------CDPDVITYN 130

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I+  CK   + KA     +MK   + P+VVTY++ I   C      EA + F++M   
Sbjct: 131 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV 190

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P+  T+  ++D  CK   + EA +L++ ++Q G++ N  TY  L+DG C  G++  A
Sbjct: 191 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 250

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           EE+F +M + G   +  +Y  L++G+ K KE+E A  + +EM  K IKP ++ Y T+  G
Sbjct: 251 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 310

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    ++E A  L  E++  G+  +   YTT +D   K+G   EA+ L   +      LD
Sbjct: 311 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM------LD 364

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
                 L+DGLCK+   + A +LF  +    ++P+ + Y  +I G    G + +A +L  
Sbjct: 365 ------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 418

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            M E     D+  +  LI G     +  K   LL +M  K V+PD  +
Sbjct: 419 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 466



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 206/417 (49%), Gaps = 18/417 (4%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA+  F K++ F   P   + N L++ L + G   ++   F++M    G  G+  K +  
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM----GAAGI--KRSVF 57

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +ID LCKEG ++ A++LF QMK+    PD+VTYNSLI G       +E   +F +M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            D    P V+T+N +++  CK  +M +A   L  M   G++PN  TY+T +D FC  G +
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A + F  M  +    ++ +Y  LI+  CK   + EAL L  E++  GIK  VVTY  L
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL E  +++ A ++F  M   GVA +  TYT  + G  K   +  A ++ + ++    
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D+  Y  ++ GLC   RL+ A  L   +    +  N V Y  ++      GQ  +A  
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           L  +M +            L+ G  + N      +L  +M +K +MPD    + ++D
Sbjct: 358 LLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALID 402



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 195/355 (54%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A   FL+M+   + P   + N+L+H L      + +++ F +M   G++ SV T+N+
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LCK   ++ A  L   M + G  P+  TYN+L+DG   +G ++    +F  M+   
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  D ++YN LIN +CK + + +A     EM + G+KP VVTY+T      +   ++ A+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           K F +M+R  +  +  TYT+ ID  CK G + EA++L   +     +L++  Y  L+DGL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+ GR+K A E+F ++ +  + PN  TY  ++ G     +M+ A+D+  +M+E    PD+
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           + +  ++ G    +   +   L+ ++KE  +  +A I + ++D   K+  + ++L
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 200/421 (47%), Gaps = 38/421 (9%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILL------A 75
            + F+  +V +  L    G + ++  +E  CIF+ M +     P V ++N L+       
Sbjct: 84  EAGFTPDIVTYNSLIDGHGKLGLL--DECICIFEQM-KDADCDPDVITYNALINCFCKFE 140

Query: 76  SLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFN 135
            + K   +   + A GL PN+ TY+  I+ FCK G +      F  + R   TPN  T+ 
Sbjct: 141 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 200

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           SLI        + EA  L  ++   G + NV+TY  L++GLC  G    A  +F  M N 
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 260

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
               GV   PN  TY+ ++ G  K   ++ AK +  +MK++ I PD++ Y +++ GLC+ 
Sbjct: 261 ----GVA--PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 314

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE-----------------------LCKNRK 292
           +   EAK L  E+ + G+  + V +  +MD                        LCKN  
Sbjct: 315 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNC 374

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            + A +L D M+ +G+ P+   Y  L+DG    G +  A  L   M  +G + D  +Y  
Sbjct: 375 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 434

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI G   + +V++A +L  EM+ KG+ P  V Y  L    + + +V+ AL+L +EM + G
Sbjct: 435 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494

Query: 413 V 413
           +
Sbjct: 495 M 495



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 1/189 (0%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A + F +M++  V    R+    +  L K G    + + F+ +     +  +  YN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +ID LCK G L+ A  LF  +      P++VTYN +I G    G +D+   +F  M++  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             PDVIT++ LI+ F +     K  E LH+MK   + P+    S  +D   K E  L+  
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK-EGMLQEA 180

Query: 578 PSFLVQERQ 586
             F V  R+
Sbjct: 181 IKFFVDMRR 189


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 255/511 (49%), Gaps = 13/511 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  F  L+ +LA+    +  L        + L P++  YN+ I+CF K G V + +  F 
Sbjct: 217 VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 276

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  ++ S+I  L    R+ EA  LF +++     P    YNT+I G    G
Sbjct: 277 ELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L +++          C P+ V++++I+  L K+  VD+A  LF  MK ++  P
Sbjct: 337 QFENAYKLLDQLKERG------CIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEP 389

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  TYN +I  LC A    EA  +  EM   G+ P+++T N+++D LCK +K + A  + 
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +   QRG  PN+ TY +L+DG    G ++ A  LF +M   G   + V Y  LI  +  +
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMH 509

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+   +++EM  +G +P +   NT    +F+   VE    +F++++  G   D R+Y
Sbjct: 510 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 569

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GL K G   E   +F  ++     LD +AYN ++DG CKSG+L  A+E+   +  
Sbjct: 570 SILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKV 629

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P V TY  +I GL    ++D+A  LF + +      +VI +  LI GF ++    +
Sbjct: 630 KRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 689

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L +M +K + P+    + ++D LVK E
Sbjct: 690 AYLILEEMMKKGLTPNVYTWNSLMDALVKAE 720



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 258/531 (48%), Gaps = 13/531 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N+ +    K  + D        L + GL P+  +Y  +I   CK GR+S     
Sbjct: 250 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEEL 309

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG++      P A  +N++I G  +  +   A  L  +LK  GC P+V+++N+++  L +
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGK 369

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL LFE M           +PN+ TY+ IID LC  G V++A  +  +M+   +
Sbjct: 370 KRKVDEALTLFEAMKKD-------AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGL 422

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+++T N ++  LC A  +  A  +F     +G  P+ VT+  ++D L K   +D+A R
Sbjct: 423 FPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYR 482

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + M+  G   N   Y +L+  F + G+     ++F  M   GC+ D    N  ++   
Sbjct: 483 LFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVF 542

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +VE+  +++ ++   G  P V +Y+ L  GL +  Q      +F  M++ G A D R
Sbjct: 543 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDAR 602

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   +DG CK+G + +A E+   +++ +    +  Y  +IDGL K  RL  A+ LF   
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 662

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  NV+ Y+ +I G    G++D+A  +  +M +    P+V T++ L+   ++  E 
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           ++       MKE K  P+    SI+++ L + +   K+   +   ++QG V
Sbjct: 723 NEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLV 773



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 240/497 (48%), Gaps = 20/497 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF--------PNLYTYNILINCFCKIGRVSLGF 116
           P V SFN +L  L K +  D  L    LF        PN  TYNI+I+  C  G+V   +
Sbjct: 355 PSVVSFNSILTCLGKKRKVDEALT---LFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAY 411

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +    +  +   PN  T N ++  L    +   A  +F      GC PN +TY +LI+GL
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G+   A  LFE M +           N V Y+++I      G  +    +F +M   
Sbjct: 472 GKKGNVDDAYRLFENMLDTGH------NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRR 525

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD+   N+ +  +  A D  + + +F ++   G  P V ++++++  L K  +  E 
Sbjct: 526 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 585

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
           S +   M Q+G   +A  YN ++DGFC  GK+++A E+   M+         +Y  +I+G
Sbjct: 586 SSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
             K   ++EA  L+ E  SKGI+  V+ Y++L  G  ++ +++ A  + +EM + G+  +
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T+ + +D L K   I EA+  F++++ +KC  +   Y+ LI+GLC+  +   A+  + 
Sbjct: 706 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 765

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    LVPNVVTY  MI GL   G +  A  LF   + N   PD  +F+ LI G    N
Sbjct: 766 EMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHAN 825

Query: 537 EPSKVNELLHKMKEKKV 553
              +  E  H  +E ++
Sbjct: 826 ---RAIEAYHVFEETRL 839



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 241/480 (50%), Gaps = 7/480 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L   G  P++ ++N ++ C  K  +V      F   ++    PN++T+N +I  L    
Sbjct: 347 QLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNIIIDMLCMAG 405

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ EA  +  +++  G  PN++T N +++ LC+      A  +FE  A+  G     C P
Sbjct: 406 KVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE-TASQRG-----CNP 459

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N+VTY ++IDGL K+G VD A  LF  M D   N + V Y SLI          +  ++F
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIF 519

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  +G QP +   N  MD + K   +++   + + +   G  P+  +Y+ L+ G    
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKA 579

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+      +F +M+  G   D  +YN +++G+CK+ ++++A  +  EM  K + PTV TY
Sbjct: 580 GQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATY 639

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            ++  GL +I +++ A  LF+E +  G+  +   Y++ IDG  K G I EA  +   +  
Sbjct: 640 GSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMK 699

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++  +N L+D L K+  +  A   F S+      PN  TY+I+I GLC   + +K
Sbjct: 700 KGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNK 759

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A   + +M++    P+V+T+  +I G  ++   +    L  + K     PDA+  + +++
Sbjct: 760 AFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIE 819



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 195/376 (51%), Gaps = 6/376 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           TG   N   Y  LI  F   GR   G   F  + R    P+    N+ +  +     + +
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK 549

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
             A+F  +K +G  P+V +Y+ LI+GL + G      ++F  M      +      +   
Sbjct: 550 GRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFAL------DARA 603

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ ++DG CK G +DKA  +  +MK + + P V TY S+I GL   +  +EA  LF E  
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++ +V+ ++ ++D   K  ++DEA  +L+ M+++G+ PN  T+N+LMD      +IN
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEIN 723

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A   F SM+ M C  +  +Y+ILING C+ ++  +A   ++EM  +G+ P VVTY T+ 
Sbjct: 724 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMI 783

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL ++  +  A  LF+  + +G   D  ++   I+G+      IEA  +F   R+  C 
Sbjct: 784 AGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCR 843

Query: 450 LDIQAYNCLIDGLCKS 465
           ++++A   L+D L K+
Sbjct: 844 INVKACISLLDALNKA 859



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 1/322 (0%)

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++  L +   +D A+ +   M+     P    Y  LI  +  A     A  L  +M +
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G +  V  F  ++  L +  +++ A  L+D +    + P+   YN  +D F   G ++ 
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A + F  ++S G K DDVSY  +I   CK   + EA  L+ +M ++   P    YNT+ +
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G     Q E+A KL D+++  G      ++ + +  L K   + EA+ LF  ++    E 
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEP 389

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   YN +ID LC +G+++ A+ +   + H  L PN++T NIM+  LC   + + A ++F
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449

Query: 511 LDMEENAAAPDVITFDMLIHGF 532
               +    P+ +T+  LI G 
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGL 471



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 132/256 (51%), Gaps = 13/256 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A+ + + M ++   PP V+++  ++  LAK    D          + G+  N+  Y+ 
Sbjct: 618 DKAYEVLEEM-KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ F K+GR+   ++    +++   TPN  T+NSL+  L     I EA   F  +K   
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN  TY+ LINGLCR      A   ++EM       G+V  PN VTY+T+I GL K G
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ----GLV--PNVVTYTTMIAGLAKVG 790

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +  A +LF + K     PD  ++N+LI G+ HAN   EA  +F E   +G + +V    
Sbjct: 791 NITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACI 850

Query: 282 VIMDELCKNRKMDEAS 297
            ++D L K   +++A+
Sbjct: 851 SLLDALNKAECLEQAA 866



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 164/347 (47%), Gaps = 6/347 (1%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            YN+++  L H  D    +++  EM   G          ++  L + R++D+A R++  M
Sbjct: 116 AYNAVLPFLSH--DLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAM 173

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +   RP    Y  L+       +  RA EL   M+ +G +     +  L+    +   V
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           E AL+L  E+    ++P +V YN       +   V+ A K F E++  G+  D  +YT+ 
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSM 293

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I  LCK G + EA ELF  +   +      AYN +I G   +G+ + A++L   L     
Sbjct: 294 IWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGC 353

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+VV++N ++  L    ++D+A  LF  M+++ A P+  T++++I       +  +   
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD-AEPNSSTYNIIIDMLCMAGKVEEAYM 412

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           +  +M+   + P+   V+I+VD L K +   K  P++ + E   + G
Sbjct: 413 IRDEMEHAGLFPNLLTVNIMVDRLCKAK---KFEPAYEMFETASQRG 456



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 116/262 (44%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E++   M  +G    + +   L++   + + +++A  +   M     +P    Y  L   
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           + E  Q E AL+L  +MQ  G       +TT +  L + G +  A+ L   ++    E D
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN  ID   K+G +  AW+ F  L    L P+ V+Y  MI  LC  G++ +A +LF 
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            ME   A P    ++ +I G+    +     +LL ++KE+  +P     + ++  L K  
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371

Query: 572 ISLKSLPSFLVQERQGEVGESN 593
              ++L  F   ++  E   S 
Sbjct: 372 KVDEALTLFEAMKKDAEPNSST 393


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 218/453 (48%), Gaps = 12/453 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN  +Y  L+   C+ G++         + R    P+  T+N +I  L    RI  A   
Sbjct: 33  PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 92

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +     EP+V+TYNTL+ GLC+ G    A +LF  M       G    P+ VTY+T+
Sbjct: 93  FETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSME------GAGITPSDVTYTTL 142

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ID  CK    + A  L   M     +P V +Y S+I+GLC     ++A +LF EM   G 
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P  VT+N ++  LC  +++ EA  LL +MV+ G +P+  T+  L++G C   +I  A  
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFV 262

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           LF  M   GC  D V++ +L++  C  +++  ALS+ R          V+ Y  +F  L 
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYTPIFRELG 320

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                + A +L  +M R GV  +  TYT F  GL      + A   FR +     E D+ 
Sbjct: 321 RRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 380

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           AYN L+DG CK+ RL  A ++   +    L PN+VTYN ++   C  G+++   +L   M
Sbjct: 381 AYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 440

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
                 PDV T+  L+ G   + +       L+
Sbjct: 441 VSRGRQPDVATWSTLVAGLFMVGQADAAYSFLN 473



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 217/448 (48%), Gaps = 18/448 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+  L+ +L +    D   +         L P+++TYN++I+  CK  R+S     
Sbjct: 33  PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 92

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F     +   P+  T+N+L+ GL    R+ +A +LF  ++  G  P+ +TY TLI+  C+
Sbjct: 93  F----ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 148

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  L + MA+        C P   +Y +II+GLCK   VD+A  LF +MK    
Sbjct: 149 MCQFETAYGLLQLMASRK------CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD VTYN+LIHGLC     +EAK L   M++ G QP  +TF  +++ LC   ++ EA  
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFV 262

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M ++G  P+  T+  L+   C++ K+  A  +  +  +  C    + Y  +     
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPA--CPEAVILYTPIFRELG 320

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + +  + A  L ++M  +G+ P VVTY   F GL +  +   A + F  M   G+  D  
Sbjct: 321 RRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 380

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   +DG CK   +  A ++ R +       +I  YN L+   C+ G+++   EL  ++
Sbjct: 381 AYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 440

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
                 P+V T++ ++ GL   GQ D A
Sbjct: 441 VSRGRQPDVATWSTLVAGLFMVGQADAA 468



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 216/465 (46%), Gaps = 43/465 (9%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T N+L+  L    R  +   +F ++ +  C+PN ++Y  L+  LCRTG    A +   EM
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           A           P+  TY+ +ID LCK   + +A   F  M +    PDVVTYN+L+ GL
Sbjct: 62  AREK------LVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGL 111

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      +A  LF  M   G+ PS VT+  ++D  CK  + + A  LL LM  R   P  
Sbjct: 112 CKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTV 171

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            +Y ++++G C   K+++A +LF  M+  GCK D V+YN LI+G C  + + EA  L   
Sbjct: 172 YSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTV 231

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC---- 428
           MV  G +P  +T+  L  GL    +++ A  LF  M + G A D  T+T  +  LC    
Sbjct: 232 MVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRK 291

Query: 429 ---------KNGYIIEAVELF--------------RTLRILK------CELDIQAYNCLI 459
                          EAV L+              R  R+L+         ++  Y    
Sbjct: 292 LRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFF 351

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            GL        A+  F  +    + P++V YN+++ G C   ++D A  +   M+++   
Sbjct: 352 KGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLP 411

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           P+++T++ L+    R  +   + ELLH M  +   PD +  S +V
Sbjct: 412 PNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 456



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 193/405 (47%), Gaps = 12/405 (2%)

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +T N L++ L R   +   + +F  + + +      CKPN ++Y  ++  LC+ G +DKA
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQD------CKPNALSYCYLVKALCRTGKIDKA 54

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
            +   +M  E + PDV TYN +I  LC A   + A    IE  +   +P VVT+N ++  
Sbjct: 55  CSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA----IEFFETMPEPDVVTYNTLLGG 110

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LCKN ++ +A  L   M   G+ P+  TY TL+D FC M +   A  L   M S  C   
Sbjct: 111 LCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPT 170

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             SY  +ING CKN++V++A  L+ EM   G KP  VTYNTL  GL    ++  A  L  
Sbjct: 171 VYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLT 230

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M  +G   D  T+T  I+GLC    I EA  LF+ +    C  D+  +  L+  LC   
Sbjct: 231 VMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILR 290

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +L+ A  +  + P       V+ Y  + + L      D+A  L   M      P+V+T+ 
Sbjct: 291 KLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYT 348

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               G     E  +      +M E+ + PD    +++VD   K +
Sbjct: 349 AFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAD 393



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 185/418 (44%), Gaps = 76/418 (18%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN--ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           P V ++N+++ +L K +     +    T   P++ TYN L+   CK GRV+     FG +
Sbjct: 68  PDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSM 127

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
             +  TP+  T+ +LI       +   A  L   + +  C P V +Y ++INGLC+    
Sbjct: 128 EGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKV 187

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  LFEEM          CKP+ VTY+T+I GLC +  + +AK L   M +    PD 
Sbjct: 188 DQAYQLFEEMKLAG------CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDK 241

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC-------------- 288
           +T+ +LI GLC  +   EA  LF  M  QG  P +VT  V++ +LC              
Sbjct: 242 ITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRN 301

Query: 289 -------------------KNRKMDEASRLLDLMVQRGVRPNACTY-------------- 315
                              + R  D A+RLL  M +RGV PN  TY              
Sbjct: 302 YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGM 361

Query: 316 ---------------------NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
                                N L+DGFC   +++ AE++   M+  G   + V+YN L+
Sbjct: 362 RAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLV 421

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
             +C+  +VE    L   MVS+G +P V T++TL  GLF + Q + A    +     G
Sbjct: 422 GHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 10/277 (3%)

Query: 314 TYNTLMDGFCLMGKINRAEEL---FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           T N L+D   L+ +  R+E++   F  + S  CK + +SY  L+   C+  ++++A S  
Sbjct: 2   TCNALLD---LLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTI 58

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EM  + + P V TYN +   L +  ++  A++ F+ M       D  TY T + GLCKN
Sbjct: 59  AEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKN 114

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G + +A  LF ++           Y  LID  CK  + + A+ L   +      P V +Y
Sbjct: 115 GRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSY 174

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             +I GLC + ++D+A  LF +M+     PD +T++ LIHG        +  +LL  M E
Sbjct: 175 CSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVE 234

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               PD    + +++ L   +   ++   F    +QG
Sbjct: 235 NGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 271


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/473 (31%), Positives = 234/473 (49%), Gaps = 8/473 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP-NAATFNSLIKGLHAES 145
           +   G  P + TY   I+  C+ G V    +   R LR    P N+  +N++I       
Sbjct: 279 MEMNGESPTVVTYGAYIHGLCRAGCVEFA-LRLIRDLRIRNQPLNSYCYNAVIHEFCRNG 337

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            + EA  L   +++ G  P   +Y+ LI+GLC+ G    AL+L EEM   N       KP
Sbjct: 338 ELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN------VKP 391

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTYS++ DGLCK G  + + ++F  +  E    DV++YN+LI+G     D   A +L 
Sbjct: 392 SLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLV 451

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G  P+  TFN ++   CK +++D+A  +  +M++ GV+ N  T N + D F   
Sbjct: 452 HEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNRE 511

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G    A +L   ++ +G   +  +YNI+I   CK ++ E+A  +   M+   + P  + Y
Sbjct: 512 GHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHY 571

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           NTL  G  +      AL L+ +M + G+     TYT  I+       + EA  LF+ +  
Sbjct: 572 NTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIK 631

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D   + C+I G CK G +K AW L+  +      PNVVTY  +I G     +MDK
Sbjct: 632 KGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDK 691

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           A  LF  M+ +   PD +T+  LI G+  +    +V E+ ++MKE  V P+ +
Sbjct: 692 ADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYT 744



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 224/438 (51%), Gaps = 11/438 (2%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N LIK     + +++AA +F + + FG E N+++ N L+N       T    +LFEE+ +
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGF-----VDKAKALFLQMKDENINPDVVTYNSLI 249
                     PN  TY+ +++  CK  F     + KA  +  +M+    +P VVTY + I
Sbjct: 242 SGPS------PNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           HGLC A     A RL  ++  +    +   +N ++ E C+N ++ EA  LL+ M   G+ 
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P A +Y+ L+DG C  G++ +A +L   M     K   V+Y+ L +G CK+   E +LS+
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  + ++G K  V++YNTL  G      +  A KL  EM+ +G   ++ T+   I G CK
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
              + +A+E+F  +  +  +L+I   N + D   + G    A +L   +    +VPN  T
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YNI+I+ LC + + +KA ++   M +N   P  I ++ LI G+ + + P+K   L  KM 
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 550 EKKVMPDASIVSIVVDLL 567
           +  + P     ++++++ 
Sbjct: 596 KVGIPPSIVTYTMLINMF 613



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 228/470 (48%), Gaps = 11/470 (2%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+LI  F +   +      F +  R     N  + N L+      ++     +LF +LK 
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 160 FGCEPNVITYNTLINGLCRTGH-----TMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            G  PNV TY  ++N  C+         + A  + EEM   NGE      P  VTY   I
Sbjct: 242 SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEM-EMNGE-----SPTVVTYGAYI 295

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLC+ G V+ A  L   ++  N   +   YN++IH  C   + +EA  L  +M   G+ 
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  ++++++D LCK  ++++A  L++ MVQ  V+P+  TY++L DG C  G    +  +
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F ++ + G KHD +SYN LING+   +++  A  L  EM   G  P   T+N L  G  +
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +++ AL++F  M + GV  +  T     D   + G+  EA++L   ++ L    +   
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN +I  LCK  + + AWE+   +    + P  + YN +I G        KA  L+  M 
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +    P ++T+ MLI+ F   ++  +   L  +M +K ++PD  I + ++
Sbjct: 596 KVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCII 645



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 233/510 (45%), Gaps = 52/510 (10%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF----NSLIKGLHAES- 145
           GL  N+ + N L+NCF +  +       F  +  S  +PN  T+    N   KG   ++ 
Sbjct: 208 GLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNI 267

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I++A  +  +++  G  P V+TY   I+GLCR G    AL L  ++   N  +   C  
Sbjct: 268 DIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYC-- 325

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
               Y+ +I   C+ G + +A  L   M+   I+P   +Y+ LI GLC      +A  L 
Sbjct: 326 ----YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLI 381

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM+   V+PS+VT++ + D LCK+   + +  +   +   G + +  +YNTL++GF L 
Sbjct: 382 EEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQ 441

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
             +  A +L   M   G   +  ++N LI+G+CK + +++AL ++  M+  G++  + T 
Sbjct: 442 RDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTC 501

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-- 443
           N +            ALKL +E+Q  G+  ++ TY   I  LCK     +A E+   +  
Sbjct: 502 NIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLK 561

Query: 444 -RILKCELDIQAYNCLIDGLCKS-----------------------------------GR 467
             +  C +    YN LIDG  K                                     +
Sbjct: 562 NNVFPCAIH---YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSK 618

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A+ LF  +    LVP+ + +  +I G C  G M  A  L+ +M +   +P+V+T+  
Sbjct: 619 MQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTC 678

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           LI G+ +I    K + L +KMK   V PD 
Sbjct: 679 LIDGYFKIKRMDKADFLFNKMKRDNVTPDG 708



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 220/455 (48%), Gaps = 42/455 (9%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G+ P  Y+Y+ILI+  CK G+V         +++S   P+  T++SL  GL     
Sbjct: 349 MRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGL 408

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              + ++F  L A G + +VI+YNTLING         A  L  EM   NG +     PN
Sbjct: 409 TEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEM-RMNGSV-----PN 462

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + T++ +I G CK   +DKA  +F  M    +  ++ T N +         + EA +L  
Sbjct: 463 SFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLIN 522

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           E+ D G+ P+  T+N+++  LCK +K ++A  +L +M++  V P A  YNTL+DG+    
Sbjct: 523 EVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQS 582

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              +A  L+  M  +G     V+Y +LIN +    +++EA  L++EM+ KG+ P  + + 
Sbjct: 583 NPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFT 642

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  G  ++  ++ A  L++EM + G + +  TYT  IDG             F+  R+ 
Sbjct: 643 CIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDG------------YFKIKRMD 690

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           K +                        LF  +    + P+ +TY  +I G  + G  D+ 
Sbjct: 691 KADF-----------------------LFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRV 727

Query: 507 RDLFLDMEENAAAPDVITFDML-IHGFIRINEPSK 540
           R++F +M+EN   P+   +  L +H  +   EP+K
Sbjct: 728 REMFNEMKENGVFPNYTAYATLGLHLGVVREEPAK 762



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 179/356 (50%), Gaps = 5/356 (1%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  +F+Q +   +  ++++ N L++    AN     + LF E+ D G  P+V T+ ++M+
Sbjct: 197 AADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMN 256

Query: 286 ELCK-----NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             CK     N  + +A+ +L+ M   G  P   TY   + G C  G +  A  L   +  
Sbjct: 257 YYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRI 316

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
                +   YN +I+ +C+N E+ EA  L  +M S GI PT  +Y+ L  GL +  QVE 
Sbjct: 317 RNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEK 376

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL L +EM +  V     TY++  DGLCK+G    ++ +F  L     + D+ +YN LI+
Sbjct: 377 ALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLIN 436

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G      +  A +L   +     VPN  T+N +I G C   ++DKA ++F  M +     
Sbjct: 437 GFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQL 496

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           ++ T +++   F R     +  +L++++++  ++P++   +IV+  L K + + K+
Sbjct: 497 NIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKA 552



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 145/310 (46%), Gaps = 8/310 (2%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           ++ R+N  G  PN +T+N LI+ FCK  R+      F  +L+     N  T N +    +
Sbjct: 452 HEMRMN--GSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFN 509

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            E    EA  L  +++  G  PN  TYN +I  LC+   T  A  +   M   N      
Sbjct: 510 REGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNN------ 563

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
             P  + Y+T+IDG  K+    KA  L+ +M    I P +VTY  LI+   + +   EA 
Sbjct: 564 VFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAY 623

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF EM+ +G+ P  + F  I+   CK   M  A  L + M Q G  PN  TY  L+DG+
Sbjct: 624 YLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGY 683

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
             + ++++A+ LF  M+      D ++Y  LI GY      +    ++ EM   G+ P  
Sbjct: 684 FKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNY 743

Query: 383 VTYNTLFLGL 392
             Y TL L L
Sbjct: 744 TAYATLGLHL 753



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 156/323 (48%), Gaps = 5/323 (1%)

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D  +  S++  NV++    +N  + +A+ +     + G+  N  + N L++ F    +  
Sbjct: 171 DAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTE 230

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCK-----NKEVEEALSLYREMVSKGIKPTVVT 384
               LF  ++  G   +  +Y I++N YCK     N ++ +A  +  EM   G  PTVVT
Sbjct: 231 FIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVT 290

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y     GL     VE AL+L  +++      ++  Y   I   C+NG + EA EL   +R
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                    +Y+ LIDGLCK G+++ A +L   +    + P++VTY+ +  GLC  G  +
Sbjct: 351 SHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTE 410

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            +  +F ++       DVI+++ LI+GF+   +     +L+H+M+    +P++   + ++
Sbjct: 411 ISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLI 470

Query: 565 DLLVKNEISLKSLPSFLVQERQG 587
               K +   K+L  F +  + G
Sbjct: 471 HGFCKRQRLDKALEVFTIMLKVG 493



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 12/308 (3%)

Query: 52  CIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINC 105
           C   + +RM+ S P   +FN L+    K +  D  L         G+  N++T NI+ + 
Sbjct: 448 CKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADE 507

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           F + G           +      PN+ T+N +IK L  E +  +A  +   +      P 
Sbjct: 508 FNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPC 567

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
            I YNTLI+G  +  +   AL L+ +M      + V   P+ VTY+ +I+       + +
Sbjct: 568 AIHYNTLIDGYAKQSNPTKALLLYAKM------LKVGIPPSIVTYTMLINMFSNRSKMQE 621

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A  LF +M  + + PD + +  +I G C   D   A  L+ EM   G  P+VVT+  ++D
Sbjct: 622 AYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLID 681

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
              K ++MD+A  L + M +  V P+  TY  L+ G+  +G  +R  E+F  M+  G   
Sbjct: 682 GYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFP 741

Query: 346 DDVSYNIL 353
           +  +Y  L
Sbjct: 742 NYTAYATL 749


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/443 (32%), Positives = 239/443 (53%), Gaps = 16/443 (3%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++L+  +    R  LGF AF R     +  +A +   L+  L  E+R  +   ++ ++  
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
              +PNV T+N +IN LC+TG    A ++ E+M          C PN V+Y+T+IDG CK
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG------CSPNVVSYNTLIDGYCK 270

Query: 220 ---EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
               G + KA A+  +M + +++P++ T+N LI G    ++   + ++F EM+DQ V+P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V+++N +++ LC   K+ EA  + D MV  GV+PN  TYN L++GFC    +  A ++FG
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           S++  G       YN+LI+ YCK  ++++  +L  EM  +GI P V TYN L  GL    
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +E A KLFD++   G+  D  T+   ++G C+ G   +A  L + +  +  +     YN
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 457 CLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
            ++ G CK G LK A  +   +     L  NV +YN+++QG    G+++ A  L  +M E
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569

Query: 516 NAAAPDVITF-----DMLIHGFI 533
               P+ IT+     +M+  GF+
Sbjct: 570 KGLVPNRITYEIVKEEMVDQGFV 592



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 191/339 (56%), Gaps = 5/339 (1%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+  L   N   + + ++ EM+ + +QP+V TFNV+++ LCK  KM++A  +++ M   G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 308 VRPNACTYNTLMDGFCLMG---KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             PN  +YNTL+DG+C +G   K+ +A+ +   M       +  ++NILI+G+ K+  + 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            ++ +++EM+ + +KP V++YN+L  GL    ++  A+ + D+M   GV  +  TY   I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +G CKN  + EA+++F +++        + YN LID  CK G++   + L   +    +V
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V TYN +I GLC +G ++ A+ LF D   +   PD++TF +L+ G+ R  E  K   L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYCRKGESRKAAML 492

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           L +M +  + P     +IV+    K E +LK+  +   Q
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCK-EGNLKAATNMRTQ 530



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 194/376 (51%), Gaps = 29/376 (7%)

Query: 32  FRDLTTREGDINVITPN---EAFCIFDYM---------LRMHPSPPPVSSFNILLASLAK 79
           ++++  R+   NV T N    A C    M         ++++   P V S+N L+    K
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270

Query: 80  ----NKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
                K Y        +    + PNL T+NILI+ F K   +      F  +L     PN
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
             ++NSLI GL    +I EA ++  K+ + G +PN+ITYN LING C+      AL++F 
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
            +  G G +     P T  Y+ +ID  CK G +D   AL  +M+ E I PDV TYN LI 
Sbjct: 391 SV-KGQGAV-----PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           GLC   +   AK+LF ++  +G+ P +VTF+++M+  C+  +  +A+ LL  M + G++P
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSL 369
              TYN +M G+C  G +  A  +   ME     + +  SYN+L+ GY +  ++E+A  L
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563

Query: 370 YREMVSKGIKPTVVTY 385
             EM+ KG+ P  +TY
Sbjct: 564 LNEMLEKGLVPNRITY 579



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 180/335 (53%), Gaps = 11/335 (3%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           CKP       ++  L KE      + ++ +M    I P+V T+N +I+ LC     N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCK---NRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            +  +M   G  P+VV++N ++D  CK   N KM +A  +L  MV+  V PN  T+N L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DGF     +  + ++F  M     K + +SYN LING C   ++ EA+S+  +MVS G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P ++TYN L  G  +   ++ AL +F  ++  G    TR Y   ID  CK G I +   L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              +       D+  YNCLI GLC++G ++ A +LF  L    L P++VT++I+++G C 
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
            G+  KA  L  +M +    P  +T+++++ G+ +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 204/391 (52%), Gaps = 18/391 (4%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCF 106
           ++  M+R     P V +FN+++ +L K    NK  D    +   G  PN+ +YN LI+ +
Sbjct: 210 VYKEMIR-RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268

Query: 107 CKIGRVSLGFIA---FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           CK+G     + A      ++ +  +PN  TFN LI G   +  +  +  +F ++     +
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PNVI+YN+LINGLC  G    A+++ ++M +     GV  +PN +TY+ +I+G CK   +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDML 382

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A  +F  +K +   P    YN LI   C     ++   L  EM  +G+ P V T+N +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+N  ++ A +L D +  +G+ P+  T++ LM+G+C  G+  +A  L   M  MG 
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           K   ++YNI++ GYCK   ++ A ++  +M   + ++  V +YN L  G  +  ++E A 
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            L +EM   G+  +  TY    + +   G++
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 135/279 (48%), Gaps = 8/279 (2%)

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKH---DDVSYNILINGYCKNKEVEEALSLYREM 373
           + +DGF   G  ++   +F ++ SM C +   + +  ++L+  Y  N   E     ++  
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAI-SM-CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRS 179

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
              G K + ++   L + L + ++      ++ EM R  +  +  T+   I+ LCK G +
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM 239

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCK---SGRLKFAWELFCSLPHGVLVPNVVTY 490
            +A ++   +++  C  ++ +YN LIDG CK   +G++  A  +   +    + PN+ T+
Sbjct: 240 NKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF 299

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           NI+I G   D  +  +  +F +M +    P+VI+++ LI+G     + S+   +  KM  
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
             V P+    + +++   KN++  ++L  F   + QG V
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 248/475 (52%), Gaps = 7/475 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++  +++LIN   K+G +   +  + R+      PN    NSL++G H ++ +  A
Sbjct: 355 GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHA 414

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF +    G   NV+TYN L+  L   G    A NL+E+M +          P+ V+Y
Sbjct: 415 YGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKG------ITPSLVSY 467

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I G CK+G +DKA ++   + +  + P+ VTY  LI G     D   A  +F +MM 
Sbjct: 468 NNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMA 527

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             + P+  TFN +++ L K  ++ E    L+  +++G    + TYN+++DGF   G ++ 
Sbjct: 528 ANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDS 587

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   +  M   G   D ++Y  LI+G CK+ ++  AL ++ +M  KG+K  VV Y+ L  
Sbjct: 588 ALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALID 647

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  ++H +E A K F E+   G+  +T  Y + I G      +  A+ L + +   K   
Sbjct: 648 GFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPC 707

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+Q Y  +I GL K G+L  A +L+  +    +VP++V Y ++I GL N+GQ++ A  + 
Sbjct: 708 DLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKIL 767

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +M+ N   P V+ +++LI G  R     +   L  +M +K ++PD +   I+V+
Sbjct: 768 KEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 264/503 (52%), Gaps = 19/503 (3%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----NKHYD--TRLNATGLF 93
           GD+N+     A  +FD ++      P V  F++L+   +K     K Y+  TR+   G+ 
Sbjct: 339 GDVNL-----ALQLFDEVVE-GGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQ 392

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN++  N L+  F +   +   +  F   +    T N  T+N L+K L    ++ EA  L
Sbjct: 393 PNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNL 451

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           + K+ + G  P++++YN LI G C+ G    A ++ + +     E G+  KPN VTY+ +
Sbjct: 452 WEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSIL----ERGL--KPNAVTYTLL 505

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDG  K+G  ++A  +F QM   NI P   T+N++I+GL      +E +      + QG 
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGF 565

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             + +T+N I+D   K   +D A      M + G+ P+  TY +L+DG C   KI  A E
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALE 625

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +   M+  G K D V+Y+ LI+G+CK  ++E A   + E++  G+ P  V YN++  G  
Sbjct: 626 MHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFI 685

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
            ++ +E AL L  EM ++ V  D + YT+ I GL K G +  A++L+  +       DI 
Sbjct: 686 HLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIV 745

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  LI+GL  +G+L+ A ++   +    + P+V+ YNI+I G   +G + +A  L  +M
Sbjct: 746 MYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEM 805

Query: 514 EENAAAPDVITFDMLIHGFIRIN 536
            +    PD  T+D+L++G ++++
Sbjct: 806 LDKGLVPDDTTYDILVNGKLKVS 828



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 155/514 (30%), Positives = 253/514 (49%), Gaps = 40/514 (7%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  +   Y+IL+   C+   ++L       +    + P+  T+ ++I     +   +EA
Sbjct: 250 GLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEA 309

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++ + G   NVI   +L+ G C  G   +AL LF+E+  G    GVV  P+ V +
Sbjct: 310 LRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEG----GVV--PDVVIF 363

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN-------------- 256
           S +I+G  K G ++KA  L+ +MK   I P+V   NSL+ G    N              
Sbjct: 364 SVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVE 423

Query: 257 -------------DW-------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
                         W       NEA  L+ +M+ +G+ PS+V++N ++   CK   MD+A
Sbjct: 424 HGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKA 483

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +L  +++RG++PNA TY  L+DGF   G   RA  +F  M +      D ++N +ING
Sbjct: 484 YSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVING 543

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
             K   V E        + +G   T +TYN++  G F+   V+ AL  + EM   G++ D
Sbjct: 544 LGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPD 603

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT+ IDGLCK+  I  A+E+   ++    +LD+ AY+ LIDG CK   ++ A + F 
Sbjct: 604 VITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFT 663

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            L    L PN V YN MI G  +   M+ A +L  +M +N    D+  +  +I G ++  
Sbjct: 664 ELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEG 723

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + S   +L  +M  K ++PD  + +++++ L  N
Sbjct: 724 KLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNN 757



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 204/446 (45%), Gaps = 7/446 (1%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R  F  ++  FN L+K     ++I +A   F  +      P V   N L+  + R     
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  L++EM     E G+    +  T   ++    KEG  ++ +  F + K   +  D  
Sbjct: 203 DARQLYDEMV----ERGIY--GDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y+ L+  +C   D N A  L  EM + G  PS  T+  ++    K     EA RL D M
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V  G+  N     +LM G+C++G +N A +LF  +   G   D V +++LING  K  ++
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           E+A  LY  M   GI+P V   N+L  G  E + +EHA  LFDE    G+  +  TY   
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNIL 435

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +  L + G + EA  L+  +        + +YN LI G CK G +  A+ +  S+    L
Sbjct: 436 LKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGL 495

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN VTY ++I G    G  ++A  +F  M     AP   TF+ +I+G  +    S+  +
Sbjct: 496 KPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQD 555

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
            L+   ++  +  +   + ++D   K
Sbjct: 556 KLNNFIKQGFVSTSITYNSIIDGFFK 581



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 174/352 (49%), Gaps = 3/352 (0%)

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           F  M + ++ P V   N+L+  +   N   +A++L+ EM+++G+     T +V+M    K
Sbjct: 173 FRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMK 232

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             K +E  +       RG+  +A  Y+ L+   C    +N A EL   M   G      +
Sbjct: 233 EGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGT 292

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  +I    K     EAL L  EMVS G+   V+   +L  G   +  V  AL+LFDE+ 
Sbjct: 293 YTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVV 352

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             GV  D   ++  I+G  K G + +A EL+  ++++  + ++   N L++G  +   L+
Sbjct: 353 EGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLE 412

Query: 470 FAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            A+ LF  ++ HG+   NVVTYNI+++ L   G++++A +L+  M      P +++++ L
Sbjct: 413 HAYGLFDEAVEHGI--TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNL 470

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           I G  +     K   +L  + E+ + P+A   ++++D   K   S ++   F
Sbjct: 471 ILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVF 522



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 43/92 (46%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P++  Y +LIN     G++         +  +  TP+   +N LI G   E  + EA 
Sbjct: 740 IVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAF 799

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
            L  ++   G  P+  TY+ L+NG  +  HT+
Sbjct: 800 RLHDEMLDKGLVPDDTTYDILVNGKLKVSHTL 831


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 249/506 (49%), Gaps = 42/506 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA-------TGLFPNLYTYN 100
           N  + +F  M+++       +  N LL  LA+  +++ R+N          + PN+ T+ 
Sbjct: 287 NRGWDLFTEMIKLGAVLESAAC-NSLLTGLAREGNFN-RMNELMEKMVEMDIQPNVVTFG 344

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILIN  CK  RV                      +  ++ L   S   E+  +     + 
Sbjct: 345 ILINHMCKFRRV----------------------DDALEVLEKMSGGKESGGI-----SV 377

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
             EP+V+ YNTLI+GLC+ G     L L E M +  G     C P+T+TY+ +IDG CK 
Sbjct: 378 SVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKG-----CAPDTITYNCLIDGFCKA 432

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G ++K K LF +M  E + P+VVT N+L+ G+C     + A   F+E   +G++   VT+
Sbjct: 433 GEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTY 492

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             +++  C     ++A  L + M++ G  P+A  Y TL+ GF   G++  A  +   ++ 
Sbjct: 493 TALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKK 552

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           +G + D V YN LI G+C+  +      + +EM   G+KP  +TYNTL     +   ++ 
Sbjct: 553 LGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKF 612

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL-KCELDIQAYNCLI 459
           A K+  +M + GV     TY   I+  C NG   EA+E+F+ ++   K   +   YN LI
Sbjct: 613 AQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILI 672

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           + LCK+ ++K A  L   +    + PN  TYN + +GL ++  ++K  +    M E+A  
Sbjct: 673 NSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACN 732

Query: 520 PDVITFDMLIHGFIRINEPSKVNELL 545
           PD IT ++L      + E  ++ + +
Sbjct: 733 PDYITMEILTEWLSAVGEIERLKKFV 758



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 253/527 (48%), Gaps = 14/527 (2%)

Query: 47  PNEAF--CIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILIN 104
           PN+A    +F ++L+   +   +S   I+   L   +H        G+  + +    LI 
Sbjct: 227 PNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEH--------GVLISSFWMGRLIT 278

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             C+  + + G+  F  +++      +A  NSL+ GL  E        L  K+     +P
Sbjct: 279 RLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQP 338

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANG--NGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           NV+T+  LIN +C+      AL + E+M+ G  +G I V  +P+ V Y+T+IDGLCK G 
Sbjct: 339 NVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGR 398

Query: 223 VDKAKALFLQMKDEN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             +   L  +M+ +    PD +TYN LI G C A +  + K LF EM  +GV P+VVT N
Sbjct: 399 QQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVN 458

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  +C+  ++  A        +RG++ +A TY  L++ FC +    +A ELF  M   
Sbjct: 459 TLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKS 518

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D + Y  LI+G+ +   + +A  +  E+   GI+P  V YNTL  G    ++    
Sbjct: 519 GCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRV 578

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++  EM+  G+  DT TY T I    KNG +  A ++ R +        +  Y  +I+ 
Sbjct: 579 FEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINA 638

Query: 462 LCKSGRLKFAWELFCSLPHGVLVP-NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            C +G    A E+F  +     VP N V YNI+I  LC + ++  A  L  DM+     P
Sbjct: 639 YCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTP 698

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +  T++ +  G     +  KV E + +M E    PD   + I+ + L
Sbjct: 699 NTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWL 745



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 234/498 (46%), Gaps = 30/498 (6%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRS-----CFTPNAAT----FNSLIKGLHAES 145
           N Y  N+ ++   + GRV         +  S     C  PN AT    F+ L+K    E 
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNC-RPNDATGDILFSFLLKRERNEE 247

Query: 146 RIME--AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
            + E     L  K    G   +      LI  LCR   T    +LF EM     ++G V 
Sbjct: 248 LLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMI----KLGAVL 303

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +  +   ++++ GL +EG  ++   L  +M + +I P+VVT+  LI+ +C     ++A  
Sbjct: 304 E--SAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALE 361

Query: 264 LFIEMMDQG---------VQPSVVTFNVIMDELCKNRKMDEASRLLDLM-VQRGVRPNAC 313
           + +E M  G         V+P VV +N ++D LCK  +  E   L++ M  Q+G  P+  
Sbjct: 362 V-LEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTI 420

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TYN L+DGFC  G+I + +ELF  M   G   + V+ N L+ G C+   V  A++ + E 
Sbjct: 421 TYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEA 480

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             +G+K   VTY  L      ++  E A++LF+EM + G + D   Y T I G  + G +
Sbjct: 481 QRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRM 540

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A  +   L+ L    D   YN LI G C++ +    +E+   +    L P+ +TYN +
Sbjct: 541 ADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTL 600

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK-EKK 552
           I     +G +  A+ +   M +    P V T+  +I+ +      ++  E+   MK   K
Sbjct: 601 IAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK 660

Query: 553 VMPDASIVSIVVDLLVKN 570
           V P+  I +I+++ L KN
Sbjct: 661 VPPNTVIYNILINSLCKN 678



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 137/323 (42%), Gaps = 37/323 (11%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCF 106
           +FD M +     P V + N L+  + +     + +N        G+  +  TY  LIN F
Sbjct: 441 LFDEMNK-EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C +         F  +L+S  +P+A  + +LI G     R+ +A+ +  +LK  G  P+ 
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDT 559

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEM------------------ANGNGEIGVVCK---- 204
           + YNTLI G CRT        + +EM                  A+ NG++    K    
Sbjct: 560 VCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRK 619

Query: 205 -------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-INPDVVTYNSLIHGLCHAN 256
                  P   TY  +I+  C  G  ++A  +F  MK  + + P+ V YN LI+ LC  N
Sbjct: 620 MIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNN 679

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
               A  L  +M   GV P+  T+N I   L   + +++    +D M++    P+  T  
Sbjct: 680 KVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITME 739

Query: 317 TLMDGFCLMGKINRAEELFGSME 339
            L +    +G+I R ++     E
Sbjct: 740 ILTEWLSAVGEIERLKKFVAGCE 762



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 15/276 (5%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS------LYREMVSKGIKPTVVTY 385
           +E+F S +   C+ +D + +IL +   K +  EE LS      L  +    G+  +    
Sbjct: 214 DEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWM 273

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L   L    +      LF EM + G   ++    + + GL + G      EL   +  
Sbjct: 274 GRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVE 333

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG--------VLVPNVVTYNIMIQGL 497
           +  + ++  +  LI+ +CK  R+  A E+   +  G         + P+VV YN +I GL
Sbjct: 334 MDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGL 393

Query: 498 CNDGQMDKARDLFLDME-ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           C  G+  +   L   M  +   APD IT++ LI GF +  E  K  EL  +M ++ V P+
Sbjct: 394 CKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN 453

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
              V+ +V  + +      ++  F+  +R+G  G++
Sbjct: 454 VVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDA 489


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 259/527 (49%), Gaps = 44/527 (8%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A+GL P    Y  LI  +C+   V  G+     + +     +  T+ +++KG+ +   + 
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  +  ++ A GC PNV+ Y TLI    +      A+ + +EM     E G+   P+  
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIF 488

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+++I GL K   +D+A++  ++M +  + P+  TY + I G   A+++  A +   EM
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            + GV P+ V    +++E CK  K+ EA      MV +G+  +A TY  LM+G     K+
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + AEE+F  M   G   D  SY +LING+ K   +++A S++ EMV +G+ P V+ YN L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G     ++E A +L DEM   G+  +  TY T IDG CK+G + EA  LF  +++   
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELF---------CSLPHGVLV--------------- 484
             D   Y  L+DG C+   ++ A  +F          + P   L+               
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788

Query: 485 --------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
                         PN VTYNIMI  LC +G ++ A++LF  M+     P VIT+  L++
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           G+ ++   +++  +  +     + PD  + S++++  +K  ++ K+L
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 238/483 (49%), Gaps = 21/483 (4%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A+G  PN+  Y  LI  F +  R          +      P+   +NSLI GL    R+ 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA +   ++   G +PN  TY   I+G         A    +EM     E GV+  PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
             + +I+  CK+G V +A + +  M D+ I  D  TY  L++GL   +  ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G+ P V ++ V+++   K   M +AS + D MV+ G+ PN   YN L+ GFC  G+I
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG+ P    Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   ++ VE A+ +F    + G A+ T  +   I+ + K G      E+    R++  
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLN--RLMDG 795

Query: 449 ELDI------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
             D         YN +ID LCK G L+ A ELF  + +  L+P V+TY  ++ G     +
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY---DK 852

Query: 503 MDKARDLFLDMEENAAA---PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           M +  ++F   +E  AA   PD I + ++I+ F++    +K   L+ +M  K  + D   
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912

Query: 560 VSI 562
           +SI
Sbjct: 913 LSI 915



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 245/514 (47%), Gaps = 23/514 (4%)

Query: 69  SFNILLASLAKNKHYDTRLNATGLFPNLYTYNILIN------CFC---KIGRVSLGFIAF 119
           ++++L+  L K ++ D    A GL   + ++ I I       C C   K G +      F
Sbjct: 314 TYSLLIDGLLKGRNADA---AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             ++ S   P A  + SLI+G   E  + +   L  ++K      +  TY T++ G+C +
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A N+ +EM      I   C+PN V Y+T+I    +      A  +  +MK++ I 
Sbjct: 431 GDLDGAYNIVKEM------IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD+  YNSLI GL  A   +EA+   +EM++ G++P+  T+   +    +  +   A + 
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M + GV PN      L++ +C  GK+  A   + SM   G   D  +Y +L+NG  K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N +V++A  ++REM  KGI P V +Y  L  G  ++  ++ A  +FDEM  +G+  +   
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + G C++G I +A EL   + +     +   Y  +IDG CKSG L  A+ LF  + 
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVP+   Y  ++ G C    +++A  +F    +   A     F+ LI+   +  +  
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 540 KVNELLHKMKEKKV----MPDASIVSIVVDLLVK 569
              E+L+++ +        P+    +I++D L K
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 239/535 (44%), Gaps = 47/535 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLY-------------TYNILINCFCKIGR 111
           P +S   +LL +L        R N   LF ++Y             TY++LI   C+ G 
Sbjct: 184 PRLSRCKVLLDAL-------LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN 236

Query: 112 VSLG---FIAFGRILRSC------------------FTPNAATFNSLIKGLHAESRIMEA 150
           V LG        +  R+                     P   T++ LI GL    R+ +A
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +L  ++ + G   +  TY+ LI+GL +  +   A  L  EM +     G+  KP    Y
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH----GINIKP--YMY 350

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
              I  + KEG ++KAKALF  M    + P    Y SLI G C   +  +   L +EM  
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + +  S  T+  ++  +C +  +D A  ++  M+  G RPN   Y TL+  F    +   
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +   M+  G   D   YN LI G  K K ++EA S   EMV  G+KP   TY     
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  E  +   A K   EM+  GV  +    T  I+  CK G +IEA   +R++       
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D + Y  L++GL K+ ++  A E+F  +    + P+V +Y ++I G    G M KA  +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +M E    P+VI ++ML+ GF R  E  K  ELL +M  K + P+A     ++D
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 218/485 (44%), Gaps = 59/485 (12%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N L+  L+K K  D        +   GL PN +TY   I+ + +    +     
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DK 543

Query: 119 FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           + + +R C   PN      LI     + +++EA + +  +   G   +  TY  L+NGL 
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +      A  +F EM  G G       P+  +Y  +I+G  K G + KA ++F +M +E 
Sbjct: 604 KNDKVDDAEEIFREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P+V+ YN L+ G C + +  +AK L  EM  +G+ P+ VT+  I+D  CK+  + EA 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC-------------- 343
           RL D M  +G+ P++  Y TL+DG C +  + RA  +FG+ +  GC              
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776

Query: 344 -------------------------KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
                                    K +DV+YNI+I+  CK   +E A  L+ +M +  +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            PTV+TY +L  G  ++ +      +FDE    G+  D   Y+  I+   K G   +A+ 
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896

Query: 439 LFRTLRILK-----CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
           L   +         C+L I     L+ G  K G ++ A ++  ++     +P+  T   +
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956

Query: 494 IQGLC 498
           I   C
Sbjct: 957 INESC 961



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 208/465 (44%), Gaps = 20/465 (4%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           + +   F  L  G  A+  I EA  +F+        P +     L++ L R       L+
Sbjct: 148 SDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           LF ++  G  E  VV   +  TY  +I   C+ G V   K +  + + E       T N 
Sbjct: 204 LFWDVYKGMVERNVVF--DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF---RTATLN- 257

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            + G         A +L   M+ +G+ P   T++V++D LCK +++++A  LL  M   G
Sbjct: 258 -VDG---------ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           V  +  TY+ L+DG       + A+ L   M S G       Y+  I    K   +E+A 
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +L+  M++ G+ P    Y +L  G      V    +L  EM++  +     TY T + G+
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C +G +  A  + + +    C  ++  Y  LI    ++ R   A  +   +    + P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             YN +I GL    +MD+AR   ++M EN   P+  T+   I G+I  +E +  ++ + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           M+E  V+P+  + + +++   K    +++  ++     QG +G++
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 158/330 (47%), Gaps = 17/330 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNI 101
            +A  IFD M+      P V  +N+LL        + K K     ++  GL PN  TY  
Sbjct: 644 QKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+ +CK G ++  F  F  +      P++  + +L+ G    + +  A  +F   K  G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-G 761

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  +   +N LIN + + G T +   +   + +G+       KPN VTY+ +ID LCKEG
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--FDRFGKPNDVTYNIMIDYLCKEG 819

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ AK LF QM++ N+ P V+TY SL++G        E   +F E +  G++P  + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNAC-----TYNTLMDGFCLMGKINRAEELFG 336
           VI++   K     +A  L+D M  +    + C     T   L+ GF  +G++  AE++  
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939

Query: 337 SMESMGCKHDDVSYNILINGYC--KNKEVE 364
           +M  +    D  +   LIN  C   N+ VE
Sbjct: 940 NMVRLQYIPDSATVIELINESCISSNQRVE 969



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 148/349 (42%), Gaps = 52/349 (14%)

Query: 227 KALFLQMKDENINPDVVTYNSL-IHGLCHANDWNE---AKRLFIEMMDQGVQPSVVTFNV 282
           +A FL  +  ++N + ++  S  I G+    +W +   +  L IE     + P VV    
Sbjct: 15  RANFLLFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIE-----INPEVVL--- 66

Query: 283 IMDELCKNRKMDEASRLLDLM----VQRGVRPNACTYNTLMDGFCLMGKINRA------- 331
               + +++++D+ S+LL        Q+       +++ L    C  G   +A       
Sbjct: 67  ---SVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERM 123

Query: 332 -------EELFGSM-----ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
                   E++ S+     E +G   D V + IL +GY   + +EEA+ ++   +   + 
Sbjct: 124 IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELV 183

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P +     L   L   ++++    ++  M    V  D +TY   I   C+ G     V+L
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG----NVQL 239

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            + + + K E + +     +D     G LK    + C      LVP   TY+++I GLC 
Sbjct: 240 GKDV-LFKTEKEFRTATLNVD-----GALKLKESMICK----GLVPLKYTYDVLIDGLCK 289

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             +++ A+ L ++M+    + D  T+ +LI G ++         L+H+M
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 21/179 (11%)

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G + D   +    DG     YI EAV +F +   L+    +     L+D L +  RL   
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE---------------- 515
           W+++  +    +V +V TY+++I   C  G +   +D+    E+                
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 516 -----NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                    P   T+D+LI G  +I        LL +M    V  D    S+++D L+K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 234/465 (50%), Gaps = 6/465 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N A++N +   L    R++EA  L  +++  GC P+VI+Y+T+ING C+ G     L L 
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           EEM           KPN  TY+ +I  LCK G V +A+ +  +M  E I PD V Y +LI
Sbjct: 312 EEMQIKG------LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 365

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C   + + A RLF EM  + + P  +T+  ++  LC+  ++ EA +L   MV + + 
Sbjct: 366 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 425

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  TY  L+DG+C  GK+  A  L   M  MG   + V+Y  L +G CK  EV+ A  L
Sbjct: 426 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 485

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EM  KG++  + TYN+L  GL +   ++ A+KL  +M+  G   D  TYTT +D  CK
Sbjct: 486 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 545

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +  ++ A EL R +   + +  +  +N L++G C SG L+   +L   +    ++PN  T
Sbjct: 546 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 605

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YN +I+  C    M    +++  M      PD  T+++LI G  +     +   L   M 
Sbjct: 606 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMV 665

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
            K      S  + ++    K +  L++   F    R+G V +  +
Sbjct: 666 GKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 230/460 (50%), Gaps = 12/460 (2%)

Query: 68  SSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           +S+NI+  SL +            ++   G  P++ +Y+ +IN +C++G +         
Sbjct: 254 ASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEE 313

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +      PN  T+N +I  L    ++ EA  +  ++ + G  P+ + Y TLI+G C+ G+
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A  LF+EM            P+ +TY+ +I GLC+ G V +A  LF +M  + + PD
Sbjct: 374 VSSAYRLFDEMQKRK------ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY +LI G C      EA  L  +M+  G+ P++VT+  + D LCK  ++D A+ LL 
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M ++G+  N  TYN+L++G C  G I++A +L   ME  G   D V+Y  L++ YCK++
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           E+  A  L R+M+ + ++PTVVT+N L  G      +E   KL   M   G+  +  TY 
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + I   C    +    E++R +       D   YN LI G CK+  +K AW L   +   
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 667

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
                V +YN +I+G     +  +AR+LF  M       D
Sbjct: 668 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 707



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 240/478 (50%), Gaps = 8/478 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKGLHAESRIM 148
            G+  N  +YNI+ +  C++GRV        ++ LR C  P+  +++++I G      + 
Sbjct: 247 VGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI-PDVISYSTVINGYCQVGELQ 305

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
               L  +++  G +PN  TYN +I  LC+TG    A  +  EM      I     P+ V
Sbjct: 306 RVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM------ISEGIAPDGV 359

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+T+IDG CK G V  A  LF +M+   I+PD +TY ++I GLC      EA +LF EM
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + + ++P  VT+  ++D  CK  KM EA  L + M+Q G+ PN  TY  L DG C  G++
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A EL   M   G + +  +YN L+NG CK   +++A+ L ++M   G  P  VTY TL
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                +  ++  A +L  +M    +     T+   ++G C +G + +  +L + +     
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             +   YN LI   C    ++   E++  +    +VP+  TYNI+I+G C    M +A  
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 659

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           L  DM        V +++ LI GF +  +  +  EL  +M+ + ++ D  I +I  D+
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 717



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 216/415 (52%), Gaps = 6/415 (1%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F +    G   N  +YN + + LC+ G  + A  L  +M          C P+ ++
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRG------CIPDVIS 290

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YST+I+G C+ G + +   L  +M+ + + P+  TYN +I  LC      EA+R+  EM+
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P  V +  ++D  CK   +  A RL D M +R + P+  TY  ++ G C  G++ 
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A++LF  M     + D+V+Y  LI+GYCK  +++EA SL+ +M+  G+ P +VTY  L 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  +V+ A +L  EM R G+  +  TY + ++GLCK G I +AV+L + + +    
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  L+D  CKS  +  A EL   +    L P VVT+N+++ G C  G ++    L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              M E    P+  T++ LI  +   N      E+   M  K V+PD +  +I++
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 212/398 (53%), Gaps = 32/398 (8%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSLGF 116
           + P+P   +   +LL    K    +  L    + G+ P+   Y  LI+ FCK+G VS  +
Sbjct: 319 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 378

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  + +   +P+  T+ ++I GL    R+MEA  LF ++     EP+ +TY  LI+G 
Sbjct: 379 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438

Query: 177 CRTGHTMIALNLFEEM---------------ANGNGEIGVV----------CKP----NT 207
           C+ G    A +L  +M               A+G  + G V          C+     N 
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+++++GLCK G +D+A  L   M+    +PD VTY +L+   C + +   A  L  +
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 558

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+D+ +QP+VVTFNV+M+  C +  +++  +LL  M+++G+ PNA TYN+L+  +C+   
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 618

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +    E++  M + G   D  +YNILI G+CK + ++EA  L+R+MV KG   TV +YN 
Sbjct: 619 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 678

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           L  G ++  +   A +LF++M+R+G+ AD   Y  F D
Sbjct: 679 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/441 (32%), Positives = 220/441 (49%), Gaps = 12/441 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   GL PN YTYN +I   CK G+V+        ++     P+   + +LI G      
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-- 204
           +  A  LF +++     P+ ITY  +I GLC+TG  M A  LF EM         VCK  
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM---------VCKRL 424

Query: 205 -PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+ VTY+ +IDG CKEG + +A +L  QM    + P++VTY +L  GLC   + + A  
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  EM  +G++ ++ T+N +++ LCK   +D+A +L+  M   G  P+A TY TLMD +C
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              ++ RA EL   M     +   V++N+L+NG+C +  +E+   L + M+ KGI P   
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN+L       + +    +++  M   GV  D  TY   I G CK   + EA  L R +
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 664

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                 L + +YN LI G  K  +   A ELF  +    LV +   YNI      ++G+M
Sbjct: 665 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 724

Query: 504 DKARDLFLDMEENAAAPDVIT 524
           +   +L  +  E     D+ T
Sbjct: 725 ELTLELCDEAIEKCLVGDIQT 745



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 202/414 (48%), Gaps = 9/414 (2%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV-VCKPNTVTYS 211
           L    K +G +P V  ++     L   G    A  LF++M N    I V  C       S
Sbjct: 171 LIYTYKDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLS 228

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
             +DG      +  A  +F++  +  +  +  +YN + H LC      EA +L ++M  +
Sbjct: 229 EDLDG------IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR 282

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P V++++ +++  C+  ++    +L++ M  +G++PN  TYN ++   C  GK+  A
Sbjct: 283 GCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEA 342

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E +   M S G   D V Y  LI+G+CK   V  A  L+ EM  + I P  +TY  +  G
Sbjct: 343 ERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICG 402

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  +V  A KLF EM    +  D  TYT  IDG CK G + EA  L   +  +    +
Sbjct: 403 LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  Y  L DGLCK G +  A EL   +    L  N+ TYN ++ GLC  G +D+A  L  
Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 522

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           DME     PD +T+  L+  + +  E  + +ELL +M ++++ P     +++++
Sbjct: 523 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 205/382 (53%), Gaps = 4/382 (1%)

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE-AKRLFIEMMDQGVQP 275
           L + G +D+A+ LF +M +  +   V + N  I  L    D  + A ++F+E  + GV  
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW 251

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +  ++N+I   LC+  ++ EA +LL  M  RG  P+  +Y+T+++G+C +G++ R  +L 
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M+  G K +  +YN +I   CK  +V EA  + REM+S+GI P  V Y TL  G  ++
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
             V  A +LFDEMQ+  ++ D  TYT  I GLC+ G ++EA +LF  +   + E D   Y
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LIDG CK G++K A+ L   +    L PN+VTY  +  GLC  G++D A +L  +M  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
                ++ T++ L++G  +     +  +L+  M+     PDA   + ++D   K+   ++
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 576 S---LPSFLVQERQGEVGESNV 594
           +   L   L +E Q  V   NV
Sbjct: 552 AHELLRQMLDRELQPTVVTFNV 573



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 19/384 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
           + A+ +FD M +   SP  ++ +  ++  L +       + A  LF         P+  T
Sbjct: 375 SSAYRLFDEMQKRKISPDFIT-YTAVICGLCQTGRV---MEADKLFHEMVCKRLEPDEVT 430

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y  LI+ +CK G++   F    ++L+   TPN  T+ +L  GL     +  A  L  ++ 
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 490

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G E N+ TYN+L+NGLC+ G+   A+ L ++M            P+ VTY+T++D  C
Sbjct: 491 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH------PDAVTYTTLMDAYC 544

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   + +A  L  QM D  + P VVT+N L++G C +    + ++L   M+++G+ P+  
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++ + C    M   + +   M  +GV P+  TYN L+ G C    +  A  L   M
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 664

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G      SYN LI G+ K K+  EA  L+ +M  +G+      YN      ++  ++
Sbjct: 665 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 724

Query: 399 EHALKLFDEMQRDGVAADTRTYTT 422
           E  L+L DE     +  D +T  T
Sbjct: 725 ELTLELCDEAIEKCLVGDIQTKNT 748


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 259/527 (49%), Gaps = 44/527 (8%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A+GL P    Y  LI  +C+   V  G+     + +     +  T+ +++KG+ +   + 
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  +  ++ A GC PNV+ Y TLI    +      A+ + +EM     E G+   P+  
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIF 488

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+++I GL K   +D+A++  ++M +  + P+  TY + I G   A+++  A +   EM
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            + GV P+ V    +++E CK  K+ EA      MV +G+  +A TY  LM+G     K+
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + AEE+F  M   G   D  SY +LING+ K   +++A S++ EMV +G+ P V+ YN L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G     ++E A +L DEM   G+  +  TY T IDG CK+G + EA  LF  +++   
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELF---------CSLPHGVLV--------------- 484
             D   Y  L+DG C+   ++ A  +F          + P   L+               
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788

Query: 485 --------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
                         PN VTYNIMI  LC +G ++ A++LF  M+     P VIT+  L++
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           G+ ++   +++  +  +     + PD  + S++++  +K  ++ K+L
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 238/483 (49%), Gaps = 21/483 (4%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A+G  PN+  Y  LI  F +  R          +      P+   +NSLI GL    R+ 
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA +   ++   G +PN  TY   I+G         A    +EM     E GV+  PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
             + +I+  CK+G V +A + +  M D+ I  D  TY  L++GL   +  ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G+ P V ++ V+++   K   M +AS + D MV+ G+ PN   YN L+ GFC  G+I
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A+EL   M   G   + V+Y  +I+GYCK+ ++ EA  L+ EM  KG+ P    Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   ++ VE A+ +F    + G A+ T  +   I+ + K G      E+    R++  
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLN--RLMDG 795

Query: 449 ELDI------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
             D         YN +ID LCK G L+ A ELF  + +  L+P V+TY  ++ G     +
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY---DK 852

Query: 503 MDKARDLFLDMEENAAA---PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           M +  ++F   +E  AA   PD I + ++I+ F++    +K   L+ +M  K  + D   
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912

Query: 560 VSI 562
           +SI
Sbjct: 913 LSI 915



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 245/514 (47%), Gaps = 23/514 (4%)

Query: 69  SFNILLASLAKNKHYDTRLNATGLFPNLYTYNILIN------CFC---KIGRVSLGFIAF 119
           ++++L+  L K ++ D    A GL   + ++ I I       C C   K G +      F
Sbjct: 314 TYSLLIDGLLKGRNADA---AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             ++ S   P A  + SLI+G   E  + +   L  ++K      +  TY T++ G+C +
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A N+ +EM      I   C+PN V Y+T+I    +      A  +  +MK++ I 
Sbjct: 431 GDLDGAYNIVKEM------IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD+  YNSLI GL  A   +EA+   +EM++ G++P+  T+   +    +  +   A + 
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M + GV PN      L++ +C  GK+  A   + SM   G   D  +Y +L+NG  K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N +V++A  ++REM  KGI P V +Y  L  G  ++  ++ A  +FDEM  +G+  +   
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   + G C++G I +A EL   + +     +   Y  +IDG CKSG L  A+ LF  + 
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVP+   Y  ++ G C    +++A  +F    +   A     F+ LI+   +  +  
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTE 783

Query: 540 KVNELLHKMKEKKV----MPDASIVSIVVDLLVK 569
              E+L+++ +        P+    +I++D L K
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 239/535 (44%), Gaps = 47/535 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLY-------------TYNILINCFCKIGR 111
           P +S   +LL +L        R N   LF ++Y             TY++LI   C+ G 
Sbjct: 184 PRLSRCKVLLDAL-------LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN 236

Query: 112 VSLG---FIAFGRILRSC------------------FTPNAATFNSLIKGLHAESRIMEA 150
           V LG        +  R+                     P   T++ LI GL    R+ +A
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +L  ++ + G   +  TY+ LI+GL +  +   A  L  EM +     G+  KP    Y
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH----GINIKP--YMY 350

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
              I  + KEG ++KAKALF  M    + P    Y SLI G C   +  +   L +EM  
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + +  S  T+  ++  +C +  +D A  ++  M+  G RPN   Y TL+  F    +   
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +   M+  G   D   YN LI G  K K ++EA S   EMV  G+KP   TY     
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  E  +   A K   EM+  GV  +    T  I+  CK G +IEA   +R++       
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D + Y  L++GL K+ ++  A E+F  +    + P+V +Y ++I G    G M KA  +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +M E    P+VI ++ML+ GF R  E  K  ELL +M  K + P+A     ++D
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 218/485 (44%), Gaps = 59/485 (12%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N L+  L+K K  D        +   GL PN +TY   I+ + +    +     
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DK 543

Query: 119 FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           + + +R C   PN      LI     + +++EA + +  +   G   +  TY  L+NGL 
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +      A  +F EM  G G       P+  +Y  +I+G  K G + KA ++F +M +E 
Sbjct: 604 KNDKVDDAEEIFREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P+V+ YN L+ G C + +  +AK L  EM  +G+ P+ VT+  I+D  CK+  + EA 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC-------------- 343
           RL D M  +G+ P++  Y TL+DG C +  + RA  +FG+ +  GC              
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776

Query: 344 -------------------------KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
                                    K +DV+YNI+I+  CK   +E A  L+ +M +  +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            PTV+TY +L  G  ++ +      +FDE    G+  D   Y+  I+   K G   +A+ 
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896

Query: 439 LFRTLRILK-----CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
           L   +         C+L I     L+ G  K G ++ A ++  ++     +P+  T   +
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956

Query: 494 IQGLC 498
           I   C
Sbjct: 957 INESC 961



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 195/468 (41%), Gaps = 33/468 (7%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           + +   F  L  G  A+  I EA  +F+        P +     L++ L R       L+
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE------NIN-- 239
           LF ++  G  E  VV   +  TY  +I   C+ G V   K +  + + E      N++  
Sbjct: 204 LFWDVYKGMVERNVVF--DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261

Query: 240 -------------PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                        P   TY+ LI GLC      +AK L +EM   GV     T+++++D 
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK---INRAEELFGSMESMGC 343
           L K R  D A  L+  MV  G+      Y+  +   C+M K   + +A+ LF  M + G 
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGL 378

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
                +Y  LI GYC+ K V +   L  EM  + I  +  TY T+  G+     ++ A  
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +  EM   G   +   YTT I    +N    +A+ + + ++      DI  YN LI GL 
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K+ R+  A      +    L PN  TY   I G     +   A     +M E    P+ +
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               LI+ + +  +  +       M ++ ++ DA   +++++ L KN+
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/499 (22%), Positives = 212/499 (42%), Gaps = 69/499 (13%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP-------------NTVT 209
           E  + +++ L   LC  G    AL++ E M   N  +  V                + V 
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +  + DG   +G++++A  +F       + P +     L+  L   N  +    ++  M+
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213

Query: 270 DQGVQPSVVTFNVIM-------------DELCKNRK--------MDEASRLLDLMVQRGV 308
           ++ V   V T+++++             D L K  K        +D A +L + M+ +G+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P   TY+ L+DG C + ++  A+ L   M+S+G   D+ +Y++LI+G  K +  + A  
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L  EMVS GI      Y+     + +   +E A  LFD M   G+    + Y + I+G C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           +   + +  EL   ++     +    Y  ++ G+C SG L  A+ +   +      PNVV
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 489 TYNIMIQ-----------------------------------GLCNDGQMDKARDLFLDM 513
            Y  +I+                                   GL    +MD+AR   ++M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
            EN   P+  T+   I G+I  +E +  ++ + +M+E  V+P+  + + +++   K    
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573

Query: 574 LKSLPSFLVQERQGEVGES 592
           +++  ++     QG +G++
Sbjct: 574 IEACSAYRSMVDQGILGDA 592



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 158/330 (47%), Gaps = 17/330 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNI 101
            +A  IFD M+      P V  +N+LL        + K K     ++  GL PN  TY  
Sbjct: 644 QKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+ +CK G ++  F  F  +      P++  + +L+ G    + +  A  +F   K  G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-G 761

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  +   +N LIN + + G T +   +   + +G+       KPN VTY+ +ID LCKEG
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--FDRFGKPNDVTYNIMIDYLCKEG 819

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ AK LF QM++ N+ P V+TY SL++G        E   +F E +  G++P  + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNAC-----TYNTLMDGFCLMGKINRAEELFG 336
           VI++   K     +A  L+D M  +    + C     T   L+ GF  +G++  AE++  
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939

Query: 337 SMESMGCKHDDVSYNILINGYC--KNKEVE 364
           +M  +    D  +   LIN  C   N+ VE
Sbjct: 940 NMVRLQYIPDSATVIELINESCISSNQRVE 969



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 130/292 (44%), Gaps = 38/292 (13%)

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           +W +++++  + +D        +F+ +  +LC     ++A  +++ M++R   P A  ++
Sbjct: 85  NWVDSQKVTEQKLD--------SFSFLALDLCNFGSFEKALSVVERMIERN-WPVAEVWS 135

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +++   C             S E +G   D V + IL +GY     +EEA+ ++   +  
Sbjct: 136 SIVR--C-------------SQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGL 180

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            + P +     L   L   ++++    ++  M    V  D +TY   I   C+ G     
Sbjct: 181 ELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG----N 236

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           V+L + + + K E + +     +D     G LK    + C      LVP   TY+++I G
Sbjct: 237 VQLGKDV-LFKTEKEFRTATLNVD-----GALKLKESMICK----GLVPLKYTYDVLIDG 286

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           LC   +++ A+ L ++M+    + D  T+ +LI G ++         L+H+M
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 237/470 (50%), Gaps = 7/470 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +N LI+ +CK+  ++       R+     + +   +N+L+ G         A  +  ++K
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A G EP+V+T+ TLI   C+      A  L+E M       GV+  P+ VT S ++DGLC
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS----GVL--PDVVTLSALVDGLC 305

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           ++G   +A ALF +M    + P+ VTY + I  L      NE+  L  EM+ +GV   +V
Sbjct: 306 RDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLV 365

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +  +MD L K  K++EA  +L   +   + PN  TY  L+D  C  G I+ AE++   M
Sbjct: 366 MYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           E      + V+++ ++NG  K   + +A    R+M   GI P VVTY TL  G F+    
Sbjct: 426 EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E AL ++ +M  +GV A+     + ++GL KNG I EA  LF+ +      LD   Y  L
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +DGL K+G +  A ++   L    L P+ V YN+ I  LC  G+  +A+    +M     
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDLL 567
            PD  T++ +I    R    SK  +LL++MK   + P+  +  ++VV LL
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLL 655



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 254/507 (50%), Gaps = 12/507 (2%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  +N L+A    +   D       R+ A G+ P++ T+  LI  +CK+ R+   F  + 
Sbjct: 224 VVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYE 283

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++RS   P+  T ++L+ GL  + R  EA ALF ++   G  PN +TY T I+ L +  
Sbjct: 284 GMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQ 343

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               +L L  EM +     GV    + V Y+T++D L KEG +++AK +      +NI P
Sbjct: 344 RVNESLGLLGEMVSR----GVAM--DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITP 397

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           + VTY  L+   C A + + A+++ ++M ++ V P+VVTF+ I++ L K   + +A+  +
Sbjct: 398 NCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYM 457

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M   G+ PN  TY TL+DGF        A +++  M   G + ++   + L+NG  KN
Sbjct: 458 RKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKN 517

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +EEA +L+++M  +G+    V Y TL  GLF+   +  ALK+  E+    ++ D   Y
Sbjct: 518 GNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVY 577

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
             FI+ LC+ G   EA    + +R    E D   YN +I   C+ G    A +L   +  
Sbjct: 578 NVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKW 637

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PN++TY  ++ GL   G ++KA+ L  +M      P  +T+  ++        P  
Sbjct: 638 SSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYV 697

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
           + E+   M    +  D ++ + +V +L
Sbjct: 698 ILEVHELMMGAGLHADITVYNTLVHVL 724



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 244/534 (45%), Gaps = 68/534 (12%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN  TY +L++  C+ G +        ++     +PN  TF+S++ GL     I +AA  
Sbjct: 397 PNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGY 456

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM--------------------A 193
             K+K  G  PNV+TY TLI+G  +      AL+++ +M                     
Sbjct: 457 MRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRK 516

Query: 194 NGN-----------GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           NGN           GE G++   + V Y+T++DGL K G +  A  +  ++ + N++PD 
Sbjct: 517 NGNIEEAEALFKDMGERGLLL--DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDA 574

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN  I+ LC    ++EAK    EM + G++P   T+N ++   C+     +A +LL+ 
Sbjct: 575 VVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNE 634

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--------------CK---- 344
           M    ++PN  TY TL+ G    G + +A+ L   M S G              C     
Sbjct: 635 MKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRS 694

Query: 345 ----------------HDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
                           H D++ YN L++  C +    +A  +  EM+ +GI P  +T+N 
Sbjct: 695 PYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNA 754

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L LG  +   +++A   + +M   G++ +  T+ T + GL   G I EA  +   ++ + 
Sbjct: 755 LILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMG 814

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E +   Y+ L+ G  K      A  L+C +     +P   TYN +I      G M++A+
Sbjct: 815 LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAK 874

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           +LF +M+         T+D+L++G+ ++   ++V  LL  MKE    P    +S
Sbjct: 875 ELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTIS 928



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 238/515 (46%), Gaps = 14/515 (2%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           P+PPP      L+ +LA +           +  +  T N +I  +C +  +         
Sbjct: 46  PAPPPARLLRRLIPALASSGLVAAASRFRPVPGDPLTLNSIILSYCSLHALRPAL----S 101

Query: 122 ILRSCFTP------NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           +LRS   P      +  ++N  + GL  +     A  + +++   G   + +T +T + G
Sbjct: 102 LLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVG 161

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L RTG    A  L E +  G G  G+      V ++ +IDG CK   +  A A+  +M  
Sbjct: 162 LSRTGLVGEAAALAEMLVRGRGIDGL----GVVGWNALIDGYCKVQDMAAALAVVERMTT 217

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + ++ DVV YN+L+ G  ++ D + A  +   M   GV+PSVVT   ++ E CK ++++E
Sbjct: 218 QGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEE 277

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L + MV+ GV P+  T + L+DG C  G+ + A  LF  M+ +G   + V+Y   I+
Sbjct: 278 AFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFID 337

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
              K + V E+L L  EMVS+G+   +V Y T+   L +  ++E A  +      D +  
Sbjct: 338 SLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITP 397

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TYT  +D  C+ G I  A ++   +       ++  ++ +++GL K G +  A    
Sbjct: 398 NCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYM 457

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + PNVVTY  +I G       + A D++ DM       +    D L++G  + 
Sbjct: 458 RKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKN 517

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               +   L   M E+ ++ D    + ++D L K 
Sbjct: 518 GNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKT 552



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 231/526 (43%), Gaps = 49/526 (9%)

Query: 65  PPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +F+ +L  L      AK   Y  ++  +G+ PN+ TY  LI+ F K          
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +L      N    +SL+ GL     I EA ALF  +   G   + + Y TL++GL +
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551

Query: 179 TGHTMIALNLFEEMANGNGE---------IGVVCK--------------------PNTVT 209
           TG+   AL + +E+   N           I  +C+                    P+  T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T+I   C+EG   KA  L  +MK  +I P+++TY +L+ GL  A    +AK L  EM 
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P+ +T+  ++     +R       + +LM+  G+  +   YNTL+   C  G   
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTR 731

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A  +   M   G   D +++N LI G+CK+  ++ A + Y +M+ +G+ P + T+NTL 
Sbjct: 732 KATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLL 791

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    ++  A  +  EM++ G+  +  TY   + G  K    +EA+ L+       CE
Sbjct: 792 GGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLY-------CE 844

Query: 450 L-------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +           YN LI    K+G +  A ELF  +    ++    TY+I++ G      
Sbjct: 845 MVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRN 904

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             + R L  DM+E    P   T   +   F +     +   LL  +
Sbjct: 905 GTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 220/474 (46%), Gaps = 8/474 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +YNI +    + G   L       + +     +  T ++ + GL     + EAAAL   L
Sbjct: 119 SYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEML 178

Query: 158 -KAFGCEP-NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
            +  G +   V+ +N LI+G C+      AL + E M      + VV       Y+T++ 
Sbjct: 179 VRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVV------GYNTLVA 232

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           G    G  D A  +  +MK + + P VVT+ +LI   C      EA  L+  M+  GV P
Sbjct: 233 GFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLP 292

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            VVT + ++D LC++ +  EA  L   M + GV PN  TY T +D    + ++N +  L 
Sbjct: 293 DVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLL 352

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
           G M S G   D V Y  +++   K  ++EEA  + R  +S  I P  VTY  L       
Sbjct: 353 GEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRA 412

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
             ++ A ++  +M+   V+ +  T+++ ++GL K G I +A    R ++      ++  Y
Sbjct: 413 GNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LIDG  K    + A +++  + H  +  N    + ++ GL  +G +++A  LF DM E
Sbjct: 473 GTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGE 532

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                D + +  L+ G  +        ++  ++ E+ + PDA + ++ ++ L +
Sbjct: 533 RGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCR 586


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/505 (32%), Positives = 242/505 (47%), Gaps = 32/505 (6%)

Query: 85  TRLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           TR+ A+   PN+ TY IL+ C C    K+GR     I    I   C+ P+   FNSL+  
Sbjct: 66  TRMRASSCLPNVLTYRILL-CGCLNKEKLGRCKR--ILSMMITEGCY-PSPRIFNSLVHA 121

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT-MIALNLFEEMANGNGEI 199
                    A  L  K+   GC+P  + YN LI G+C +       L+L E+      E 
Sbjct: 122 YCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEA 181

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GVV   N V  S     LC  G  +KA  +  +M  +   PD  TY+ +I  LC+A+   
Sbjct: 182 GVVL--NKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVE 239

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +A +LF EM   G+ P V  +  ++D  CK   +++A    D M + G  PN  TY  L+
Sbjct: 240 KAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALI 299

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
             +    K+++A E++  M S GC  + V+Y  LI+G CK  ++E+A  +Y+ M  + ++
Sbjct: 300 HAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVE 359

Query: 380 -----------------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
                            P V TY  L  GL + +QV+ A  L   M  +G   +   Y  
Sbjct: 360 IPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDA 419

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELD--IQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            IDG CK G + EA E+F T+  L+C  D  +  Y+ LID L K  RL  A ++   +  
Sbjct: 420 LIDGCCKAGKLDEAQEVFTTM--LECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
               PNVV Y  MI GLC  G+ D+A  L + MEE    P+V+T+  +I GF +     K
Sbjct: 478 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEK 537

Query: 541 VNELLHKMKEKKVMPDASIVSIVVD 565
             ELL +M  K   P+     ++++
Sbjct: 538 CLELLQQMSSKGCAPNFVTYRVLIN 562



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 234/475 (49%), Gaps = 19/475 (4%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            +   G+ P++Y Y  LI+ FCK G +      F  + R    PN  T+ +LI       
Sbjct: 247 EMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSR 306

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI------ 199
           ++ +A  ++  + + GC PN++TY  LI+GLC+ G    A  +++ M   N EI      
Sbjct: 307 KVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMH 366

Query: 200 -----GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                G   +PN  TY  ++DGLCK   V +A+ L   M  E   P+ V Y++LI G C 
Sbjct: 367 FRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCK 426

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           A   +EA+ +F  M++ G  P+V T++ ++D L K++++D A ++L  M++    PN   
Sbjct: 427 AGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVI 486

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y  ++DG C +GK + A +L   ME  GC  + V+Y  +I+G+ K+  VE+ L L ++M 
Sbjct: 487 YTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMS 546

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           SKG  P  VTY  L         ++ A KL +EM++         Y   I+G   N   I
Sbjct: 547 SKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFI 604

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL----PHGVLVPNVVTY 490
            ++ L   +           Y  LID   K+GRL+ A EL   L    P      N+  +
Sbjct: 605 ASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNI--H 662

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
             +I+ L    + DKA +L+ DM    + P++     LI G +R+N   +  +LL
Sbjct: 663 ITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 243/494 (49%), Gaps = 28/494 (5%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+   Y  +I+  C+            R+  S   PN  T+  L+ G   + ++     +
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
            + +   GC P+   +N+L++  CR+G    A  L ++M          C+P  V Y+ +
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCG------CQPGYVVYNIL 153

Query: 214 IDGLCK-----EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           I G+C      +  +D A+  + +M +  +  + V  ++    LC    + +A  +  EM
Sbjct: 154 IGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREM 213

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           M +G  P   T++ ++  LC   K+++A +L   M + G+ P+   Y TL+D FC  G I
Sbjct: 214 MSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFI 273

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A   F  ME  GC  + V+Y  LI+ Y K+++V +A  +Y  M+SKG  P +VTY  L
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTAL 333

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGV-----------------AADTRTYTTFIDGLCKNG 431
             GL +  ++E A +++  M+++ V                   +  TY   +DGLCK  
Sbjct: 334 IDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAY 393

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EA +L +++ +  CE +   Y+ LIDG CK+G+L  A E+F ++      PNV TY+
Sbjct: 394 QVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYS 453

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I  L  D ++D A  +   M EN+ AP+V+ +  +I G  ++ +  +  +L+  M+EK
Sbjct: 454 SLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEK 513

Query: 552 KVMPDASIVSIVVD 565
              P+    + ++D
Sbjct: 514 GCNPNVVTYTAMID 527



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 240/523 (45%), Gaps = 31/523 (5%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++  G   + +T     +  CK G+      A   + +  F P+   +  +I GL   S 
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWRE---ALSLLEKEEFVPDTVLYTKMISGLCEASL 57

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA    T+++A  C PNV+TY  L+ G C     +        M    G     C P+
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCG-CLNKEKLGRCKRILSMMITEG-----CYPS 111

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE-----A 261
              +++++   C+ G    A  L  +M      P  V YN LI G+C + +  +     A
Sbjct: 112 PRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLA 171

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           ++ + EM++ GV  + V  +     LC   K ++A  ++  M+ +G  P+  TY+ ++  
Sbjct: 172 EKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGY 231

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C   K+ +A +LF  M+  G   D   Y  LI+ +CK   +E+A + + EM   G  P 
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTY  L     +  +V  A ++++ M   G   +  TYT  IDGLCK G I +A ++++
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351

Query: 442 TLRILKCEL-----------------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            ++    E+                 ++  Y  L+DGLCK+ ++K A +L  S+      
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE 411

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           PN V Y+ +I G C  G++D+A+++F  M E    P+V T+  LI    +        ++
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKV 471

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           L KM E    P+  I + ++D L K   + ++    ++ E +G
Sbjct: 472 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG 514



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 162/351 (46%), Gaps = 43/351 (12%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN++TY  L++  CK  +V         +      PN   +++LI G     ++ EA  +
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           FT +   G +PNV TY++LI+ L +     +AL +  +M   +      C PN V Y+ +
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS------CAPNVVIYTEM 490

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGLCK G  D+A  L + M+++  NP+VVTY ++I G   +    +   L  +M  +G 
Sbjct: 491 IDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGC 550

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR-------GVR----------------- 309
            P+ VT+ V+++  C    +DEA +LL+ M Q        G R                 
Sbjct: 551 APNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLS 610

Query: 310 ---------PNACTYNTLMDGFCLMGKINRAEEL---FGSMESMGCKHDDVSYNILINGY 357
                    P A  Y  L+D F   G++  A EL     S       + ++   ++ N  
Sbjct: 611 FEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLS 670

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
             +K  ++A  LY +M+S+G  P +     L  GL  +++ E AL+L D +
Sbjct: 671 LAHK-ADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 264/539 (48%), Gaps = 23/539 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTY 99
           P EAF +   M       P + + N++L  L K+        H++    +  +  +  T+
Sbjct: 170 PEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV--SAATF 227

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           +ILIN   K G +            +  T +  T+ +++  L    +I EA AL  K+ A
Sbjct: 228 SILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITA 287

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ VTY+++IDGL K
Sbjct: 288 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVVTYTSLIDGLGK 341

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           E    +A  LF +M    +  D V Y +LI GL       +A  ++  M   G  P VVT
Sbjct: 342 EKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVT 401

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
            + ++D L K  ++  A R+   M  RG+ PN   Y+ L+ G C   K++ A E+   M+
Sbjct: 402 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 461

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
              C  D ++YNILI+G CK+ +VE A + + EM+  G KP V TYN L  GL +    +
Sbjct: 462 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTD 521

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A  + D+M     ++    Y++ +DGLCK+G +     LF  +       + Q    LI
Sbjct: 522 AACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLI 575

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
             LCK+ R+  A  LF ++    + P+   YN +I  L   G++++ + ++ +M      
Sbjct: 576 FHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWK 633

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
           PD +T++ L++G I  N   + +    +M  +  +P  SI+  + D  +K+     S P
Sbjct: 634 PDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADDRLKDMPGPASRP 692



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 213/447 (47%), Gaps = 11/447 (2%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R  F  +  T N+L+       R  EA  L     A    P+V T+N LI G C      
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  +  EM     + GV   P+  T++ ++ GLCK G V  A   F  ++  ++     
Sbjct: 172 EAFAVIREMEE---DFGVA--PSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAA 225

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T++ LI+GL  A    +A  L  E    G    + T+  I++ L KN+K+ EA  L++ +
Sbjct: 226 TFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKI 285

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G  P   TYN L++G C MG++  A +L   +   GC  D V+Y  LI+G  K K  
Sbjct: 286 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 345

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            EA  L++EM S+G+    V Y  L  GL +  ++  A  ++  M   G   D  T +T 
Sbjct: 346 FEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 405

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGL K G I  AV +F+++       +   Y+ LI GLCK+ ++  A E+   +     
Sbjct: 406 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 465

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P+ +TYNI+I GLC  G ++ AR  F +M E    PDV T+++LI G  +         
Sbjct: 466 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACG 525

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +L  M   +      + S +VD L K+
Sbjct: 526 VLDDMSSSRF-----VYSSLVDGLCKS 547



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 37/277 (13%)

Query: 331 AEELFGSMES--MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           A ELF  + S   G +H   + N L++ + + K   EA +L +  ++   +P V T+N L
Sbjct: 101 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVL 160

Query: 389 FLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR--- 444
             G     + E A  +  EM+ D GVA   +T+   + GLCK+G ++ A++ F  +R   
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSM 220

Query: 445 -------------ILK------------------CELDIQAYNCLIDGLCKSGRLKFAWE 473
                        ++K                  C +DI  Y  +++ L K+ +++ A  
Sbjct: 221 PVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVA 280

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   +      P + TYN ++ GLC  G++++A DL   + +N   PDV+T+  LI G  
Sbjct: 281 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 340

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +     +  +L  +M  + +  D    + ++  L++ 
Sbjct: 341 KEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQT 377


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 264/577 (45%), Gaps = 85/577 (14%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNL------YTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N+L+  L KN      +    +  N+       TY  L+  FC++  + +       ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R  F P+ A  + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  LF+EMA G G      +PN VTY+ +I  LCK G ++ A  LF +M+D+ I   V 
Sbjct: 356 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV------------------------- 278
            YNSLI+G C     + A+ L   M+ +G+ P+                           
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 279 ----------TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                     TF  +++  CK++KMDEA+RL D M+   V PN  T+N +++G+CL+G I
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA---------------------- 366
            +A +L+  M  MG K D+ +Y  LI+G C    V +A                      
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589

Query: 367 -------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
                          L+ EM  +G+K  +V++  +     + H  E +  LF EM+  GV
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   YT  ID L K   +I+A+  +  + +     +   +  LI+ LCKSG L  A E
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA-E 708

Query: 474 LFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           L C  +  G ++PN  TYN  +     +G M+KA+DL   M +   A  +++F++LI G 
Sbjct: 709 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGL 767

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  +  +L+ K+ E    PD    S ++  L K
Sbjct: 768 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCK 804



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 249/514 (48%), Gaps = 42/514 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L   G+ PN++ YN LI+  CK  R       F  +      PN  T+  LI  L    
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I +A  LF K++  G +  V  YN+LING C+ G    A  L   M            P
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------LTP 441

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              +YS +I GLC+ G +     L  +M +  I  +  T+ +LI+G C     +EA RLF
Sbjct: 442 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M+D  V P+ VTFNV+++  C    + +A +L D MV+ G++P+  TY +L+ G CL 
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561

Query: 326 GKINRAEE-----------------------------------LFGSMESMGCKHDDVSY 350
             +++A E                                   L+  M   G K D VS+
Sbjct: 562 SGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSF 621

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            I++    K  + E++  L+REM  +G+KP  + Y  +   L +   +  AL  +D+M  
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV 681

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           DG + +T T+T  I+ LCK+GY+  A  L + +       +   YNC +D     G ++ 
Sbjct: 682 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +L  ++  G L  ++V++NI+I+GLC  G++ +A DL   + E+  +PD I++  +IH
Sbjct: 742 AKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIH 800

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              ++ + +K  EL ++M  K + PD    +I +
Sbjct: 801 ELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 242/488 (49%), Gaps = 6/488 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G+  + Y Y   I  +C+   +        R+       +A  +N L+ GL    R+ E
Sbjct: 192 SGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQE 251

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +   +   G   + +TY TL+ G CR     +AL +  +M      +G V  P+   
Sbjct: 252 AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEAN 305

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            S +ID L K+  V++A +L  ++ D  + P+V  YN+LI  LC    +++A RLF EM 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P+ VT+ +++  LCK   +++A  L D M  +G++     YN+L++G+C  G ++
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  L   M   G      SY+ LI G C+N ++   + L+REM  +GI     T+  L 
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +++ A +LFD+M    V  +  T+   I+G C  G I +A +L+  +  +  +
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  LI GLC +  +  A E    L +   V N  +   ++ G   +G+  +   L
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHL 605

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +M       D+++F ++++  ++ ++  K   L  +MKE+ V PD    + ++D L K
Sbjct: 606 WDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 665

Query: 570 NEISLKSL 577
            E  +++L
Sbjct: 666 EENMIQAL 673



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 239/500 (47%), Gaps = 8/500 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           ++G+  N YT + ++    KI + +L    F ++L+S    +   + + I+  + ESR +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRA-YCESRNL 214

Query: 149 EAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           + A  L  ++++ G + + + YN L+ GLC+      A+ +   M N    IGV    + 
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN----IGVTA--DE 268

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY T++ G C+   ++ A  +   M      P     + +I  L       EA  L  +
Sbjct: 269 VTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACK 328

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           + D G+ P+V  +N ++D+LCKN + D+A RL   M  RG+ PN  TY  L+   C  G 
Sbjct: 329 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I  A  LF  M   G K     YN LINGYCK   ++ A  L   MV +G+ PT  +Y+ 
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL     +   ++L  EM   G+A +  T+T  I+G CK+  + EA  LF  +    
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   +N +I+G C  G ++ A++L+  +    L P+  TY  +I GLC    + KA 
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +   D+E + A  +  +   L++GF R    ++   L  +M  + V  D    +I+V   
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628

Query: 568 VKNEISLKSLPSFLVQERQG 587
           +K     KS   F   + QG
Sbjct: 629 LKQHDKEKSCVLFREMKEQG 648



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 233/542 (42%), Gaps = 81/542 (14%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L KN+ +D        +   GL PN  TY ILI+  CK G +      
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++           +NSLI G   +  +  A  L + +   G  P   +Y+ LI GLCR
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     + L  EMA    E G+    N  T++ +I+G CK+  +D+A  LF +M D N+
Sbjct: 456 NGDLSSCMELHREMA----ERGIAW--NNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC---------- 288
            P+ VT+N +I G C   +  +A +L+ +M++ G++P   T+  ++  LC          
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569

Query: 289 -------------------------KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                                    +  +  E   L D M  RGV+ +  ++  ++    
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                 ++  LF  M+  G K DD+ Y  +I+   K + + +AL+ + +MV  G  P  V
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID------------------ 425
           T+  L   L +   +  A  L  EM    V  +  TY  F+D                  
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 426 ----------------GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                           GLCK G I EA++L   +       D  +Y+ +I  LCK G + 
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+EL+  + +  L P+VV YNI I+     G+ DKA  ++ +M  +   P+  T+  L+
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 530 HG 531
            G
Sbjct: 870 SG 871



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 210/439 (47%), Gaps = 13/439 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +S++ L+A L +N    +       +   G+  N YT+  LIN FCK  ++      
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++ S   PN  TFN +I+G      I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           T     A     ++ N    +      N  + + ++ G  +EG   +   L+ +M    +
Sbjct: 561 TSGVSKANEFVADLENSYAVL------NNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D+V++  +++     +D  ++  LF EM +QGV+P  + +  ++D L K   M +A  
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D MV  G  PN  T+  L++  C  G +  AE L   M +     +  +YN  ++ + 
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++E+A  L+  M+ +G   ++V++N L  GL +  +++ A+ L  ++   G + D  
Sbjct: 735 TEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 793

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y+T I  LCK G I +A EL+  +     + D+ AYN  I      G    A  ++ ++
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 479 PHGVLVPNVVTYNIMIQGL 497
               + PN  TY  ++ G+
Sbjct: 854 IRSGVQPNWDTYRALLSGI 872



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 49/386 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNI------LLASLAKNKHYDTRLNATGLFPNLYTYNI 101
           +EA  +FD M+  +  P  V+ FN+      L+ ++ K      ++   GL P+ YTY  
Sbjct: 495 DEAARLFDKMIDSNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------------ 149
           LI+  C    VS        +  S    N  +  +L+ G   E R  E            
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 613

Query: 150 -----------------------AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
                                  +  LF ++K  G +P+ I Y  +I+ L +  + + AL
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           N +++M            PNTVT++ +I+ LCK G++  A+ L  +M   N+ P+  TYN
Sbjct: 674 NCWDQMVVDG------YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
             +       D  +AK L   M+ QG   S+V+FN+++  LCK  K+ EA  L+  + + 
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITES 786

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+  +Y+T++   C MG IN+A EL+  M   G K D V+YNI I     + E ++A
Sbjct: 787 GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGL 392
           L +Y  M+  G++P   TY  L  G+
Sbjct: 847 LGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 145/302 (48%)

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G+  +  T + I+  L K R+   A  L D M+Q GV  +   Y   +  +C    +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   + ++E AL++  +M R G        +  ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             ++ AYN LID LCK+ R   A  LF  +    L PN VTY I+I  LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  M +      V  ++ LI+G+ +     +   LL  M ++ + P A+  S ++  L 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 569 KN 570
           +N
Sbjct: 455 RN 456



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 40/278 (14%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           H    +   G+  +L ++ I++    K        + F  +      P+   +  +I  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
             E  +++A   + ++   G  PN +T+  LIN LC++G+   A  L +EM  GN     
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN----- 718

Query: 202 VCKPNTVTYSTIID----------------------------------GLCKEGFVDKAK 227
              PN  TY+  +D                                  GLCK G + +A 
Sbjct: 719 -VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAI 777

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  ++ +   +PD ++Y+++IH LC   D N+A  L+ EM+ +G++P VV +N+ +   
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             + + D+A  +   M++ GV+PN  TY  L+ G  LM
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 264/577 (45%), Gaps = 85/577 (14%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNL------YTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N+L+  L KN      +    +  N+       TY  L+  FC++  + +       ++
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 318

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R  F P+ A  + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 319 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 378

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  LF+EMA G G      +PN VTY+ +I  LCK G ++ A  LF +M+D+ I   V 
Sbjct: 379 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV------------------------- 278
            YNSLI+G C     + A+ L   M+ +G+ P+                           
Sbjct: 433 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 279 ----------TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                     TF  +++  CK++KMDEA+RL D M+   V PN  T+N +++G+CL+G I
Sbjct: 493 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 552

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA---------------------- 366
            +A +L+  M  MG K D+ +Y  LI+G C    V +A                      
Sbjct: 553 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 612

Query: 367 -------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
                          L+ EM  +G+K  +V++  +     + H  E +  LF EM+  GV
Sbjct: 613 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 672

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   YT  ID L K   +I+A+  +  + +     +   +  LI+ LCKSG L  A E
Sbjct: 673 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA-E 731

Query: 474 LFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           L C  +  G ++PN  TYN  +     +G M+KA+DL   M +   A  +++F++LI G 
Sbjct: 732 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGL 790

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  +  +L+ K+ E    PD    S ++  L K
Sbjct: 791 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCK 827



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 249/514 (48%), Gaps = 42/514 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L   G+ PN++ YN LI+  CK  R       F  +      PN  T+  LI  L    
Sbjct: 351 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 410

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I +A  LF K++  G +  V  YN+LING C+ G    A  L   M            P
Sbjct: 411 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------LTP 464

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              +YS +I GLC+ G +     L  +M +  I  +  T+ +LI+G C     +EA RLF
Sbjct: 465 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 524

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M+D  V P+ VTFNV+++  C    + +A +L D MV+ G++P+  TY +L+ G CL 
Sbjct: 525 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 584

Query: 326 GKINRAEE-----------------------------------LFGSMESMGCKHDDVSY 350
             +++A E                                   L+  M   G K D VS+
Sbjct: 585 SGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSF 644

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            I++    K  + E++  L+REM  +G+KP  + Y  +   L +   +  AL  +D+M  
Sbjct: 645 TIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV 704

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           DG + +T T+T  I+ LCK+GY+  A  L + +       +   YNC +D     G ++ 
Sbjct: 705 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 764

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +L  ++  G L  ++V++NI+I+GLC  G++ +A DL   + E+  +PD I++  +IH
Sbjct: 765 AKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIH 823

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              ++ + +K  EL ++M  K + PD    +I +
Sbjct: 824 ELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 242/488 (49%), Gaps = 6/488 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G+  + Y Y   I  +C+   +        R+       +A  +N L+ GL    R+ E
Sbjct: 215 SGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQE 274

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +   +   G   + +TY TL+ G CR     +AL +  +M      +G V  P+   
Sbjct: 275 AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEAN 328

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            S +ID L K+  V++A +L  ++ D  + P+V  YN+LI  LC    +++A RLF EM 
Sbjct: 329 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 388

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P+ VT+ +++  LCK   +++A  L D M  +G++     YN+L++G+C  G ++
Sbjct: 389 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 448

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  L   M   G      SY+ LI G C+N ++   + L+REM  +GI     T+  L 
Sbjct: 449 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 508

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +++ A +LFD+M    V  +  T+   I+G C  G I +A +L+  +  +  +
Sbjct: 509 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 568

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  LI GLC +  +  A E    L +   V N  +   ++ G   +G+  +   L
Sbjct: 569 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHL 628

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +M       D+++F ++++  ++ ++  K   L  +MKE+ V PD    + ++D L K
Sbjct: 629 WDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 688

Query: 570 NEISLKSL 577
            E  +++L
Sbjct: 689 EENMIQAL 696



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 239/500 (47%), Gaps = 8/500 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           ++G+  N YT + ++    KI + +L    F ++L+S    +   + + I+  + ESR +
Sbjct: 179 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRA-YCESRNL 237

Query: 149 EAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           + A  L  ++++ G + + + YN L+ GLC+      A+ +   M N    IGV    + 
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN----IGVTA--DE 291

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY T++ G C+   ++ A  +   M      P     + +I  L       EA  L  +
Sbjct: 292 VTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACK 351

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           + D G+ P+V  +N ++D+LCKN + D+A RL   M  RG+ PN  TY  L+   C  G 
Sbjct: 352 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 411

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I  A  LF  M   G K     YN LINGYCK   ++ A  L   MV +G+ PT  +Y+ 
Sbjct: 412 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 471

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL     +   ++L  EM   G+A +  T+T  I+G CK+  + EA  LF  +    
Sbjct: 472 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 531

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   +N +I+G C  G ++ A++L+  +    L P+  TY  +I GLC    + KA 
Sbjct: 532 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 591

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +   D+E + A  +  +   L++GF R    ++   L  +M  + V  D    +I+V   
Sbjct: 592 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 651

Query: 568 VKNEISLKSLPSFLVQERQG 587
           +K     KS   F   + QG
Sbjct: 652 LKQHDKEKSCVLFREMKEQG 671



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 233/542 (42%), Gaps = 81/542 (14%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L KN+ +D        +   GL PN  TY ILI+  CK G +      
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 418

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++           +NSLI G   +  +  A  L + +   G  P   +Y+ LI GLCR
Sbjct: 419 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 478

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     + L  EMA    E G+    N  T++ +I+G CK+  +D+A  LF +M D N+
Sbjct: 479 NGDLSSCMELHREMA----ERGIAW--NNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 532

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC---------- 288
            P+ VT+N +I G C   +  +A +L+ +M++ G++P   T+  ++  LC          
Sbjct: 533 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 592

Query: 289 -------------------------KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                                    +  +  E   L D M  RGV+ +  ++  ++    
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 652

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                 ++  LF  M+  G K DD+ Y  +I+   K + + +AL+ + +MV  G  P  V
Sbjct: 653 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 712

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID------------------ 425
           T+  L   L +   +  A  L  EM    V  +  TY  F+D                  
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 426 ----------------GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                           GLCK G I EA++L   +       D  +Y+ +I  LCK G + 
Sbjct: 773 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 832

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+EL+  + +  L P+VV YNI I+     G+ DKA  ++ +M  +   P+  T+  L+
Sbjct: 833 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 892

Query: 530 HG 531
            G
Sbjct: 893 SG 894



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 210/439 (47%), Gaps = 13/439 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +S++ L+A L +N    +       +   G+  N YT+  LIN FCK  ++      
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++ S   PN  TFN +I+G      I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 524 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 583

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           T     A     ++ N    +      N  + + ++ G  +EG   +   L+ +M    +
Sbjct: 584 TSGVSKANEFVADLENSYAVL------NNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 637

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D+V++  +++     +D  ++  LF EM +QGV+P  + +  ++D L K   M +A  
Sbjct: 638 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 697

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D MV  G  PN  T+  L++  C  G +  AE L   M +     +  +YN  ++ + 
Sbjct: 698 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 757

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++E+A  L+  M+ +G   ++V++N L  GL +  +++ A+ L  ++   G + D  
Sbjct: 758 TEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 816

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y+T I  LCK G I +A EL+  +     + D+ AYN  I      G    A  ++ ++
Sbjct: 817 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 876

Query: 479 PHGVLVPNVVTYNIMIQGL 497
               + PN  TY  ++ G+
Sbjct: 877 IRSGVQPNWDTYRALLSGI 895



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 49/386 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNI------LLASLAKNKHYDTRLNATGLFPNLYTYNI 101
           +EA  +FD M+  +  P  V+ FN+      L+ ++ K      ++   GL P+ YTY  
Sbjct: 518 DEAARLFDKMIDSNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 576

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------------ 149
           LI+  C    VS        +  S    N  +  +L+ G   E R  E            
Sbjct: 577 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 636

Query: 150 -----------------------AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
                                  +  LF ++K  G +P+ I Y  +I+ L +  + + AL
Sbjct: 637 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 696

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           N +++M            PNTVT++ +I+ LCK G++  A+ L  +M   N+ P+  TYN
Sbjct: 697 NCWDQMVVDG------YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 750

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
             +       D  +AK L   M+ QG   S+V+FN+++  LCK  K+ EA  L+  + + 
Sbjct: 751 CFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITES 809

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+  +Y+T++   C MG IN+A EL+  M   G K D V+YNI I     + E ++A
Sbjct: 810 GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 869

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGL 392
           L +Y  M+  G++P   TY  L  G+
Sbjct: 870 LGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 145/302 (48%)

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G+  +  T + I+  L K R+   A  L D M+Q GV  +   Y   +  +C    +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   + ++E AL++  +M R G        +  ID L K   + EA  L   L  L  
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             ++ AYN LID LCK+ R   A  LF  +    L PN VTY I+I  LC  G ++ A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  M +      V  ++ LI+G+ +     +   LL  M ++ + P A+  S ++  L 
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 477

Query: 569 KN 570
           +N
Sbjct: 478 RN 479



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 40/278 (14%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           H    +   G+  +L ++ I++    K        + F  +      P+   +  +I  L
Sbjct: 627 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 686

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
             E  +++A   + ++   G  PN +T+  LIN LC++G+   A  L +EM  GN     
Sbjct: 687 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN----- 741

Query: 202 VCKPNTVTYSTIID----------------------------------GLCKEGFVDKAK 227
              PN  TY+  +D                                  GLCK G + +A 
Sbjct: 742 -VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAI 800

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  ++ +   +PD ++Y+++IH LC   D N+A  L+ EM+ +G++P VV +N+ +   
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 860

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             + + D+A  +   M++ GV+PN  TY  L+ G  LM
Sbjct: 861 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 898


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 230/445 (51%), Gaps = 23/445 (5%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           Y  N+ I+  C++ R    +  F   L SC        N L+  L   +   E   ++ +
Sbjct: 140 YVTNLEIHSACEVFRRVQDY-GFKLSLNSC--------NPLLSALVKGNETGEMQYVYKE 190

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +     +PN+ T+N  INGLC+ G    A ++ E++            PN VTY+T+IDG
Sbjct: 191 MIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIK------AWGFSPNIVTYNTLIDG 244

Query: 217 LCKEGFVDK---AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            CK+G   K   A A+  +M    I P+ +T+N+LI G C   +   AK  F EM  QG+
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGL 304

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P++VT+N +++ L  N K+DEA  L D MV  G++PN  T+N L++GFC    I  A +
Sbjct: 305 KPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARK 364

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           LF  +       + +++N +I+ +CK   +EE  +L+  M+ +GI P V TYN L  GL 
Sbjct: 365 LFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLC 424

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
               V  A KL +EM+   + AD  TY   I G CK+G   +A +L   +  +  + +  
Sbjct: 425 RNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHV 484

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN L+DG C  G LK A ++   +       NVVTYN++I+G C  G+++ A  L  +M
Sbjct: 485 TYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEM 544

Query: 514 EENAAAP-----DVITFDMLIHGFI 533
            E    P     DV+  +ML  GFI
Sbjct: 545 LEKGLNPNRTTYDVVRLEMLEKGFI 569



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/412 (33%), Positives = 219/412 (53%), Gaps = 11/412 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G   +L + N L++   K          +  +++    PN  TFN  I GL    
Sbjct: 155 RVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAG 214

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN----LFEEMANGNGEIGV 201
           ++ +A  +   +KA+G  PN++TYNTLI+G C+ G           L E +AN       
Sbjct: 215 KLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK------ 268

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +C PN +T++T+IDG CK+  V  AK  F +M+ + + P++VTYNSLI+GL +    +EA
Sbjct: 269 IC-PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEA 327

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             L+ +M+  G++P++VTFN +++  CK + + EA +L D + ++ + PNA T+NT++D 
Sbjct: 328 IALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDA 387

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           FC  G +     L  SM   G   +  +YN LI G C+N+ V  A  L  EM +  +K  
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTYN L  G  +  +   A KL  EM   GV  +  TY T +DG C  G +  A+++  
Sbjct: 448 VVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRT 507

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +       ++  YN LI G CK+G+L+ A  L   +    L PN  TY+++
Sbjct: 508 QMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 181/306 (59%), Gaps = 6/306 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A  + PN  T+N LI+ FCK   V     AF  + R    PN  T+NSLI GL    ++ 
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLD 325

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA AL+ K+   G +PN++T+N LING C+      A  LF+++A    E  +V  PN +
Sbjct: 326 EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA----EQDLV--PNAI 379

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T++T+ID  CK G +++  AL   M DE I P+V TYN LI GLC   +   AK+L  EM
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +  ++  VVT+N+++   CK+ +  +A +LL  M+  GV+PN  TYNTLMDG+C+ G +
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A ++   ME  G + + V+YN+LI G+CK  ++E+A  L  EM+ KG+ P   TY+ +
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559

Query: 389 FLGLFE 394
            L + E
Sbjct: 560 RLEMLE 565



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 213/378 (56%), Gaps = 15/378 (3%)

Query: 65  PPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +++FNI +  L K    NK  D    + A G  PN+ TYN LI+  CK G     + A
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257

Query: 119 ---FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                 +L +   PN  TFN+LI G   +  ++ A   F +++  G +PN++TYN+LING
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L   G    A+ L+++M      +G+  KPN VT++ +I+G CK+  + +A+ LF  + +
Sbjct: 318 LSNNGKLDEAIALWDKM------VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAE 371

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           +++ P+ +T+N++I   C A    E   L   M+D+G+ P+V T+N ++  LC+N+ +  
Sbjct: 372 QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRA 431

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A +LL+ M    ++ +  TYN L+ G+C  G+ ++AE+L G M ++G K + V+YN L++
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMD 491

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           GYC    ++ AL +  +M  +G +  VVTYN L  G  +  ++E A +L +EM   G+  
Sbjct: 492 GYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551

Query: 416 DTRTYTTFIDGLCKNGYI 433
           +  TY      + + G+I
Sbjct: 552 NRTTYDVVRLEMLEKGFI 569



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 232/443 (52%), Gaps = 11/443 (2%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R C   NA   + L+        I  A  +F +++ +G + ++ + N L++ L +   T 
Sbjct: 125 RPC--ANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETG 182

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
               +++EM      I    +PN  T++  I+GLCK G ++KA+ +   +K    +P++V
Sbjct: 183 EMQYVYKEM------IKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIV 236

Query: 244 TYNSLIHGLCH---ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           TYN+LI G C    A     A  +  EM+   + P+ +TFN ++D  CK+  +  A    
Sbjct: 237 TYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAF 296

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M ++G++PN  TYN+L++G    GK++ A  L+  M  +G K + V++N LING+CK 
Sbjct: 297 EEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK 356

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K ++EA  L+ ++  + + P  +T+NT+     +   +E    L + M  +G+  +  TY
Sbjct: 357 KMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTY 416

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              I GLC+N  +  A +L   +   + + D+  YN LI G CK G    A +L   + +
Sbjct: 417 NCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLN 476

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PN VTYN ++ G C +G +  A  +   ME+     +V+T+++LI GF +  +   
Sbjct: 477 VGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLED 536

Query: 541 VNELLHKMKEKKVMPDASIVSIV 563
            N LL++M EK + P+ +   +V
Sbjct: 537 ANRLLNEMLEKGLNPNRTTYDVV 559



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 3/158 (1%)

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           I  A E+FR ++    +L + + N L+  L K         ++  +    + PN+ T+NI
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV---NELLHKMK 549
            I GLC  G+++KA D+  D++    +P+++T++ LI G  +     K+   + +L +M 
Sbjct: 206 FINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML 265

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             K+ P+    + ++D   K+E  L +  +F   +RQG
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQG 303


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 264/577 (45%), Gaps = 85/577 (14%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNL------YTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N+L+  L KN      +    +  N+       TY  L+  FC++  + +       ++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R  F P+ A  + +I  L  +  + EA +L  KL   G  PNV  YN LI+ LC+     
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  LF+EMA G G      +PN VTY+ +I  LCK G ++ A  LF +M+D+ I   V 
Sbjct: 356 DADRLFKEMA-GRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV------------------------- 278
            YNSLI+G C     + A+ L   M+ +G+ P+                           
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 279 ----------TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                     TF  +++  CK++KMDEA+RL D M+   V PN  T+N +++G+CL+G I
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA---------------------- 366
            +A +L+  M  MG K D+ +Y  LI+G C    V +A                      
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589

Query: 367 -------------LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
                          L+ EM  +G+K  +V++  +     + H  E +  LF EM+  GV
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   YT  ID L K   +I+A+  +  + +     +   +  LI+ LCKSG L  A E
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA-E 708

Query: 474 LFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           L C  +  G ++PN  TYN  +     +G M+KA+DL   M +   A  +++F++LI G 
Sbjct: 709 LLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGL 767

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  +  +L+ K+ E    PD    S ++  L K
Sbjct: 768 CKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCK 804



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 249/514 (48%), Gaps = 42/514 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L   G+ PN++ YN LI+  CK  R       F  +      PN  T+  LI  L    
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRG 387

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I +A  LF K++  G +  V  YN+LING C+ G    A  L   M            P
Sbjct: 388 MIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG------LTP 441

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              +YS +I GLC+ G +     L  +M +  I  +  T+ +LI+G C     +EA RLF
Sbjct: 442 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M+D  V P+ VTFNV+++  C    + +A +L D MV+ G++P+  TY +L+ G CL 
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561

Query: 326 GKINRAEE-----------------------------------LFGSMESMGCKHDDVSY 350
             +++A E                                   L+  M   G K D VS+
Sbjct: 562 SGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSF 621

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            I++    K  + E++  L+REM  +G+KP  + Y  +   L +   +  AL  +D+M  
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV 681

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           DG + +T T+T  I+ LCK+GY+  A  L + +       +   YNC +D     G ++ 
Sbjct: 682 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +L  ++  G L  ++V++NI+I+GLC  G++ +A DL   + E+  +PD I++  +IH
Sbjct: 742 AKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIH 800

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              ++ + +K  EL ++M  K + PD    +I +
Sbjct: 801 ELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 242/488 (49%), Gaps = 6/488 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G+  + Y Y   I  +C+   +        R+       +A  +N L+ GL    R+ E
Sbjct: 192 SGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQE 251

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +   +   G   + +TY TL+ G CR     +AL +  +M      +G V  P+   
Sbjct: 252 AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI----RLGFV--PSEAN 305

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            S +ID L K+  V++A +L  ++ D  + P+V  YN+LI  LC    +++A RLF EM 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P+ VT+ +++  LCK   +++A  L D M  +G++     YN+L++G+C  G ++
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  L   M   G      SY+ LI G C+N ++   + L+REM  +GI     T+  L 
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +++ A +LFD+M    V  +  T+   I+G C  G I +A +L+  +  +  +
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  LI GLC +  +  A E    L +   V N  +   ++ G   +G+  +   L
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHL 605

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +M       D+++F ++++  ++ ++  K   L  +MKE+ V PD    + ++D L K
Sbjct: 606 WDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 665

Query: 570 NEISLKSL 577
            E  +++L
Sbjct: 666 EENMIQAL 673



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 239/500 (47%), Gaps = 8/500 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           ++G+  N YT + ++    KI + +L    F ++L+S    +   + + I+  + ESR +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRA-YCESRNL 214

Query: 149 EAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           + A  L  ++++ G + + + YN L+ GLC+      A+ +   M N    IGV    + 
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN----IGVTA--DE 268

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY T++ G C+   ++ A  +   M      P     + +I  L       EA  L  +
Sbjct: 269 VTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACK 328

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           + D G+ P+V  +N ++D+LCKN + D+A RL   M  RG+ PN  TY  L+   C  G 
Sbjct: 329 LGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM 388

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I  A  LF  M   G K     YN LINGYCK   ++ A  L   MV +G+ PT  +Y+ 
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL     +   ++L  EM   G+A +  T+T  I+G CK+  + EA  LF  +    
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +   +N +I+G C  G ++ A++L+  +    L P+  TY  +I GLC    + KA 
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +   D+E + A  +  +   L++GF R    ++   L  +M  + V  D    +I+V   
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628

Query: 568 VKNEISLKSLPSFLVQERQG 587
           +K     KS   F   + QG
Sbjct: 629 LKQHDKEKSCVLFREMKEQG 648



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 233/542 (42%), Gaps = 81/542 (14%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+  L KN+ +D        +   GL PN  TY ILI+  CK G +      
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++           +NSLI G   +  +  A  L + +   G  P   +Y+ LI GLCR
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     + L  EMA    E G+    N  T++ +I+G CK+  +D+A  LF +M D N+
Sbjct: 456 NGDLSSCMELHREMA----ERGIAW--NNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC---------- 288
            P+ VT+N +I G C   +  +A +L+ +M++ G++P   T+  ++  LC          
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569

Query: 289 -------------------------KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                                    +  +  E   L D M  RGV+ +  ++  ++    
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                 ++  LF  M+  G K DD+ Y  +I+   K + + +AL+ + +MV  G  P  V
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID------------------ 425
           T+  L   L +   +  A  L  EM    V  +  TY  F+D                  
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 426 ----------------GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                           GLCK G I EA++L   +       D  +Y+ +I  LCK G + 
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+EL+  + +  L P+VV YNI I+     G+ DKA  ++ +M  +   P+  T+  L+
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 530 HG 531
            G
Sbjct: 870 SG 871



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 210/439 (47%), Gaps = 13/439 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +S++ L+A L +N    +       +   G+  N YT+  LIN FCK  ++      
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++ S   PN  TFN +I+G      I +A  L+ ++   G +P+  TY +LI+GLC 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           T     A     ++ N    +      N  + + ++ G  +EG   +   L+ +M    +
Sbjct: 561 TSGVSKANEFVADLENSYAVL------NNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D+V++  +++     +D  ++  LF EM +QGV+P  + +  ++D L K   M +A  
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D MV  G  PN  T+  L++  C  G +  AE L   M +     +  +YN  ++ + 
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
              ++E+A  L+  M+ +G   ++V++N L  GL +  +++ A+ L  ++   G + D  
Sbjct: 735 TEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 793

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y+T I  LCK G I +A EL+  +     + D+ AYN  I      G    A  ++ ++
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 479 PHGVLVPNVVTYNIMIQGL 497
               + PN  TY  ++ G+
Sbjct: 854 IRSGVQPNWDTYRALLSGI 872



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 49/386 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNI------LLASLAKNKHYDTRLNATGLFPNLYTYNI 101
           +EA  +FD M+  +  P  V+ FN+      L+ ++ K      ++   GL P+ YTY  
Sbjct: 495 DEAARLFDKMIDSNVIPNEVT-FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------------ 149
           LI+  C    VS        +  S    N  +  +L+ G   E R  E            
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 613

Query: 150 -----------------------AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
                                  +  LF ++K  G +P+ I Y  +I+ L +  + + AL
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           N +++M            PNTVT++ +I+ LCK G++  A+ L  +M   N+ P+  TYN
Sbjct: 674 NCWDQMVVDG------YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
             +       D  +AK L   M+ QG   S+V+FN+++  LCK  K+ EA  L+  + + 
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITES 786

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+  +Y+T++   C MG IN+A EL+  M   G K D V+YNI I     + E ++A
Sbjct: 787 GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKA 846

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGL 392
           L +Y  M+  G++P   TY  L  G+
Sbjct: 847 LGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 145/302 (48%)

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G+  +  T + I+  L K R+   A  L D M+Q GV  +   Y   +  +C    +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  L   MES G K   V YN+L+ G CKN  V+EA+ +   MV+ G+    VTY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G   + ++E AL++  +M R G        +  ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             ++ AYN LID LCK+ R   A  LF  +    L PN VTY I+I  LC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           LF  M +      V  ++ LI+G+ +     +   LL  M ++ + P A+  S ++  L 
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 569 KN 570
           +N
Sbjct: 455 RN 456



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 40/278 (14%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           H    +   G+  +L ++ I++    K        + F  +      P+   +  +I  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
             E  +++A   + ++   G  PN +T+  LIN LC++G+   A  L +EM  GN     
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN----- 718

Query: 202 VCKPNTVTYSTIID----------------------------------GLCKEGFVDKAK 227
              PN  TY+  +D                                  GLCK G + +A 
Sbjct: 719 -VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAI 777

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  ++ +   +PD ++Y+++IH LC   D N+A  L+ EM+ +G++P VV +N+ +   
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             + + D+A  +   M++ GV+PN  TY  L+ G  LM
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 243/487 (49%), Gaps = 10/487 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +N LI+ +CK+  ++       R+       +   +NSL+ G         A  +  ++K
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           A G EPNV+TY  LI   C+      A +L+E M       GV+  P+ VT S ++DGLC
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS----GVL--PDVVTLSALVDGLC 303

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           ++G   +A ALF +M    + P+ VTY +LI  L  A   +E+  L  EM+ +GV   +V
Sbjct: 304 RDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLV 363

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +  +MD L K  K++EA  +L       + PN  TY  L+D  C  G I+ AE++   M
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM 423

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           E      + V+++ +ING  K   + +A    R+M   GI P VVTY TL  G F+    
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           E AL ++ +M  +GV A+     + ++GL KNG I  A  LF+ +      LD   Y  L
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +DGL K+G +  A+++   L    L P+ V YN+ I  LC  G+  +A+    +M     
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDLLVKNEISLKSL 577
            PD  T++ +I    R  + SK  +LL +MK   + P+  +  ++VV LL   E  +   
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLL---EAGVVKK 660

Query: 578 PSFLVQE 584
             FL+ E
Sbjct: 661 AKFLLNE 667



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 251/507 (49%), Gaps = 12/507 (2%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  +N L+A    +   D       R+ A G+ PN+ TY  LI  +CK   +   F  + 
Sbjct: 222 VVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYE 281

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            ++RS   P+  T ++L+ GL  + +  EA ALF ++   G  PN +TY TLI+ L +  
Sbjct: 282 GMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKAR 341

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               +L L  EM +     GVV   + V Y+ ++D L KEG +++AK +    + +NI P
Sbjct: 342 RGSESLGLLGEMVSR----GVVM--DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITP 395

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           + VTY  L+   C A + + A+++ ++M ++ V P+VVTF+ I++ L K   + +A+  +
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYM 455

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M   G+ PN  TY TL+DGF        A +++  M   G + ++   + L+NG  KN
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKN 515

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             +E A +L+++M  +G+    V Y TL  GLF+   +  A K+  E+    ++ D   Y
Sbjct: 516 GNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVY 575

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
             FI+ LC  G   EA    + +R    E D   YN +I   C+ G+   A +L   +  
Sbjct: 576 NVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKR 635

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PN++TY  ++ GL   G + KA+ L  +M     AP  +T   ++        P  
Sbjct: 636 NSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDV 695

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
           + E+   M    +  D ++ + +V +L
Sbjct: 696 ILEIHELMMGAGLHADITVYNTLVHVL 722



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 241/494 (48%), Gaps = 6/494 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN  TY +L++  C+ G +        ++      PN  TF+S+I GL     + +AA  
Sbjct: 395 PNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADY 454

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             K+K  G  PNV+TY TLI+G  +      AL+++ +M +   E       N     ++
Sbjct: 455 MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVE------ANNFVVDSL 508

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ++GL K G ++ A+ALF  M +  +  D V Y +L+ GL    +   A ++  E+M++ +
Sbjct: 509 VNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNL 568

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P  V +NV ++ LC   K  EA   L  M   G+ P+  TYNT++   C  GK ++A +
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALK 628

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M+    K + ++Y  L+ G  +   V++A  L  EM S G  PT +T+  +     
Sbjct: 629 LLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACS 688

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              + +  L++ + M   G+ AD   Y T +  LC +G    A  +   +       D  
Sbjct: 689 GSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTI 748

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LI G CKS  L  A+ ++  + H  L PN+ T+N ++ GL + G++ +A  +  DM
Sbjct: 749 TFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDM 808

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
           ++    P+ +T+D+L+ G+ + +   +   L  +M  K  +P AS  + ++    K  + 
Sbjct: 809 KKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMM 868

Query: 574 LKSLPSFLVQERQG 587
            ++   F   +R+G
Sbjct: 869 NQAKELFSEMKRRG 882



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 212/441 (48%), Gaps = 4/441 (0%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           +  ++N  +  L  +     A  + +++   G   + +T +T + GLCRTG    A  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           E +  G G  G+    + V ++ +IDG CK   +  A A+  +M  + +  DVV YNSL+
Sbjct: 174 EMLVRGRGIDGL----DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLV 229

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G  H+ D + A  +   M   GV+P+VVT+  ++ E CK + MDEA  L + MV+ GV 
Sbjct: 230 AGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  T + L+DG C  G+ + A  LF  M+ +G   + V+Y  LI+   K +   E+L L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EMVS+G+   +V Y  L   L +  ++E A  +    Q D +  +  TYT  +D  C+
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G I  A ++   +       ++  ++ +I+GL K G L  A +    +    + PNVVT
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y  +I G       + A D++ DM       +    D L++G  +         L   M 
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 550 EKKVMPDASIVSIVVDLLVKN 570
           E+ ++ D    + ++D L K 
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKT 550



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 185/395 (46%), Gaps = 41/395 (10%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++  GL  +   Y  L++   K G +   F     ++    +P+A  +N  I  L    +
Sbjct: 528 MDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGK 587

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA +   +++  G EP+  TYNT+I   CR G T  AL L +EM   +       KPN
Sbjct: 588 FSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNS------IKPN 641

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP-------------------------- 240
            +TY+T++ GL + G V KAK L  +M      P                          
Sbjct: 642 LITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHE 701

Query: 241 ---------DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
                    D+  YN+L+H LC       A  +  EM+ +G+ P  +TFN ++   CK+ 
Sbjct: 702 LMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSS 761

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +D A  +   M+ +G+ PN  T+NTL+ G    G+I  A+ +   M+ +G + ++++Y+
Sbjct: 762 HLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYD 821

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL+ GY K     EAL LY EMVSKG  P   TYN+L     +   +  A +LF EM+R 
Sbjct: 822 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           GV   + TY   ++G  K    IE   L + ++ L
Sbjct: 882 GVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKEL 916



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 183/402 (45%), Gaps = 48/402 (11%)

Query: 28  LLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL------LASLAKNK 81
           LL H    T  +G         AF +   ++  + SP  V  +N+       L   ++ K
Sbjct: 534 LLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVV-YNVFINCLCTLGKFSEAK 592

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
            +   +  TGL P+  TYN +I   C+ G+ S        + R+   PN  T+ +L+ GL
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVIT--------------------------------- 168
                + +A  L  ++ + G  P  +T                                 
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADI 712

Query: 169 --YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
             YNTL++ LC  G    A  + +EM            P+T+T++ +I G CK   +D A
Sbjct: 713 TVYNTLVHVLCCHGMARNATVVLDEMLTRG------IAPDTITFNALILGHCKSSHLDNA 766

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
            A++ QM  + ++P++ T+N+L+ GL  A    EA  +  +M   G++P+ +T+++++  
Sbjct: 767 FAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTG 826

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K     EA RL   MV +G  P A TYN+LM  F   G +N+A+ELF  M+  G  H 
Sbjct: 827 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHT 886

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             +Y+IL+NG+ K +   E   L ++M   G KP+  T +++
Sbjct: 887 SSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSM 928



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 169/381 (44%), Gaps = 29/381 (7%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P+   YN+ INC C +G+ S        +  +   P+ AT+N++I     E +  +A 
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG---------------- 195
            L  ++K    +PN+ITY TL+ GL   G    A  L  EMA+                 
Sbjct: 628 KLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQAC 687

Query: 196 NGE-------------IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
           +G              +G     +   Y+T++  LC  G    A  +  +M    I PD 
Sbjct: 688 SGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDT 747

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           +T+N+LI G C ++  + A  ++ +M+ QG+ P++ TFN ++  L    ++ EA  +L  
Sbjct: 748 ITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSD 807

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M + G+ PN  TY+ L+ G+        A  L+  M S G      +YN L++ + K   
Sbjct: 808 MKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGM 867

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + +A  L+ EM  +G+  T  TY+ L  G  ++        L  +M+  G      T ++
Sbjct: 868 MNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISS 927

Query: 423 FIDGLCKNGYIIEAVELFRTL 443
                 + G   EA  L +TL
Sbjct: 928 MSRAFSRPGMTGEARRLLKTL 948



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 10/280 (3%)

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELF----GSMESMGCKHDDVSYNILINGYCKNK 361
           R V  +  T N+++  +C +  +  A  L     G         D VSYNI +    +  
Sbjct: 70  RPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQG 129

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR----DGVAADT 417
               A  +  EM  +G+    VT +T  +GL     V  A  L + + R    DG+  D 
Sbjct: 130 HGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL--DV 187

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             +   IDG CK   +  A+ +   +      LD+  YN L+ G   SG    A E+   
Sbjct: 188 VGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVER 247

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + PNVVTY  +I   C    MD+A  L+  M  +   PDV+T   L+ G  R  +
Sbjct: 248 MKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQ 307

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            S+   L  +M +  V P+      ++D L K     +SL
Sbjct: 308 FSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESL 347


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 245/504 (48%), Gaps = 10/504 (1%)

Query: 66  PVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
           PVS+    L    +   Y   ++   + P  +T+ +     C++GR          + R 
Sbjct: 129 PVSASQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARH 188

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
              P+A  + ++I  L  +  + EAA L  ++   GC  +V T++ ++ G+C  G    A
Sbjct: 189 GCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 248

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L + M          C P  +TY  ++ GLC+    D+A+A+  ++ + N    VV +
Sbjct: 249 ARLVDRMMTKG------CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN----VVLF 298

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N++I G        EA  L+  M  +G QP   T++++M  LCK  ++  A RLL  M +
Sbjct: 299 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 358

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +G  PN  TY  ++  FC  G  +    L   M + G   +   YN +I   CK+  ++E
Sbjct: 359 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 418

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+ L +EM S+G  P + +YNT+   L    Q+E A  +F+ +  +GV A+  TY T I 
Sbjct: 419 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 478

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            L ++G   +AV L + + +  C LD+ +YN LI  +CK G +  +  L   +    + P
Sbjct: 479 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 538

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           N V+YNI+I  LC + ++  A +L   M     APD++T++ LI+G  ++        LL
Sbjct: 539 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 598

Query: 546 HKMKEKKVMPDASIVSIVVDLLVK 569
            K+  + V PD    +I++    K
Sbjct: 599 EKLHNENVHPDIITYNILISWHCK 622



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 237/492 (48%), Gaps = 16/492 (3%)

Query: 51  FCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILIN 104
           F ++  M+     PP   +F +   +L +    D  L         G  P+   Y  +I+
Sbjct: 143 FALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH 202

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             C  G V+        +L      +  TF+ +++G+    R+ EAA L  ++   GC P
Sbjct: 203 ALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMP 262

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
            V+TY  L+ GLCR            +       +G V + N V ++T+I G   EG + 
Sbjct: 263 GVMTYGFLLQGLCR----------VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLA 312

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  L+  M  +   PD  TY+ L+HGLC       A RL  EM  +G  P+VVT+ +++
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              CKN   D+   LL+ M  +G+  N+  YN ++   C  G+++ A  L   M S GC 
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D  SYN +I   C N+++EEA  ++  ++ +G+    +TYNT+   L    + + A++L
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             EM   G + D  +Y   I  +CK+G +  ++ L   +     + +  +YN LI  LCK
Sbjct: 493 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 552

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
             R++ A EL   + +  L P++VTYN +I GLC  G M  A +L   +      PD+IT
Sbjct: 553 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 612

Query: 525 FDMLIHGFIRIN 536
           +++LI    ++ 
Sbjct: 613 YNILISWHCKVR 624



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 193/384 (50%), Gaps = 33/384 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  P + TY  L+   C++ +        GR+       N   FN++I G  AE 
Sbjct: 254 RMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEG 309

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV--- 202
           ++ EA  L+  +   GC+P+  TY+ L++GLC+ G    A+ L  EM        VV   
Sbjct: 310 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYT 369

Query: 203 ------CKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
                 CK                     N+  Y+ +I  LCK+G +D+A  L  +M+ +
Sbjct: 370 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQ 429

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             NPD+ +YN++I+ LC+     EA+ +F  ++++GV  + +T+N I+  L ++ +  +A
Sbjct: 430 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 489

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            RL   M+  G   +  +YN L+   C  G ++R+  L   M   G K ++VSYNILI+ 
Sbjct: 490 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 549

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK + V +AL L ++M+++G+ P +VTYNTL  GL ++  +  AL L +++  + V  D
Sbjct: 550 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609

Query: 417 TRTYTTFIDGLCKNGYIIEAVELF 440
             TY   I   CK   + +A  L 
Sbjct: 610 IITYNILISWHCKVRLLDDAAMLL 633



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 136/299 (45%), Gaps = 4/299 (1%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P+  TF V    LC+  + DEA  LL  M + G  P+A  Y T++   C  G +  A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   M  MGC  D  +++ ++ G C    V EA  L   M++KG  P V+TY  L  GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
             + Q + A  +   +    V      + T I G    G + EA EL+ T+ +  C+ D 
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y+ L+ GLCK GR+  A  L   +      PNVVTY I++   C +G  D  R L  +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           M       +   ++ +I+   +     +   L+ +M+ +   PD    + ++  L  NE
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNE 449



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 150/291 (51%), Gaps = 16/291 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD-TR-----LNATGLFPNLYTYNILINCFCKIGRV--SLGF 116
           P V ++ I+L S  KN  +D TR     ++A GL  N   YN +I   CK GR+  ++G 
Sbjct: 363 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 422

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           I   R  + C  P+  ++N++I  L    ++ EA  +F  L   G   N ITYNT+I+ L
Sbjct: 423 IQEMRS-QGC-NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 480

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            R G    A+ L +EM      I   C  + V+Y+ +I  +CK+G VD++  L  +M ++
Sbjct: 481 LRDGRWQDAVRLAKEM------ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I P+ V+YN LI  LC      +A  L  +M++QG+ P +VT+N +++ LCK   M  A
Sbjct: 535 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 594

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
             LL+ +    V P+  TYN L+   C +  ++ A  L     +  C   D
Sbjct: 595 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGD 645


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 244/463 (52%), Gaps = 21/463 (4%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ TY  LIN +C+ GR++    A   I      P+  T+N+++KGL    +  +A  L 
Sbjct: 177 NVVTYTALINGYCRSGRLA---DALNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELM 233

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++    C PN +T+ T I   C+ G    A+ L E M          C P+ V YST++
Sbjct: 234 EEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYG------CTPDVVIYSTLV 287

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G  ++G VD A  L   M      P+ V YN+ + GLC A  W +   L  EM+ +   
Sbjct: 288 NGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCP 344

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  TF+++   LC++  +D A  +++ M + G RP+   YNTL++ F   G+++ A  L
Sbjct: 345 PNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALML 404

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ++SM C  D +S+N  +   C+ +   +   L  +M+ +      +T+N L   L +
Sbjct: 405 ---LDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQ 461

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              V HA+++F++M +     D  TY++ I+G  + G +  A+ELF+++    C+ DI +
Sbjct: 462 HGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFS 518

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN ++ GLC++ R + A EL  ++      PN +T+NI+I  LC  G  D+A ++F  M 
Sbjct: 519 YNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMP 578

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           E  + PD+ T++ LI+GF   +E  ++++ L+ +      PDA
Sbjct: 579 EYGSTPDIFTYNALINGF---SEQGRLDDALNLLSTMSCKPDA 618



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 215/478 (44%), Gaps = 24/478 (5%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P  P   ++N +L  L   K ++        +      PN  T+   I  FC+ G +   
Sbjct: 205 PVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHA 264

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                R+ R   TP+   +++L+ G   + R+ +A  L   L    C+PN + YN  + G
Sbjct: 265 VQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVL---LNTMLCKPNTVCYNAALKG 321

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC          L  EM   +      C PN  T+S +   LC+ G VD A  +  QM+ 
Sbjct: 322 LCMAERWKDVGELIAEMVRKD------CPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQK 375

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
               PDVV YN+LI+        ++A  L   M+     P  ++FN  +  LC+  +  +
Sbjct: 376 YGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYD 432

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
              L+  M++        T+N L+D  C  G +N A E+F  M    C  D V+Y+ LIN
Sbjct: 433 VEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLIN 492

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+ +   VE A+ L++ M     KP + +YN +  GL    + E A +L   M R     
Sbjct: 493 GFSEQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T+   I+ LC+ G+   A+E+F+ +       DI  YN LI+G  + GRL  A  L 
Sbjct: 550 NEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLL 609

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            ++      P+ ++YN  ++GLC   +  +A ++  +M      P+ +TF      FI
Sbjct: 610 STMS---CKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYANQLFI 664



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 229/487 (47%), Gaps = 20/487 (4%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P +   NILI   C   R++         L+   + +A + N+L+ G   + R+ +A  +
Sbjct: 108 PAVIACNILIKKLCAHRRLADAERVLD-ALKESGSADAVSHNTLVAGYCRDGRLADAERV 166

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
               K  G   NV+TY  LING CR+G    ALNL   M            P+T TY+T+
Sbjct: 167 LEAAKVSGAA-NVVTYTALINGYCRSGRLADALNLIASMP---------VAPDTYTYNTV 216

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC     +KA+ L  +M   N +P+ VT+ + I   C     + A +L   M   G 
Sbjct: 217 LKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGC 276

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VV ++ +++   +  ++D+A  LL+ M+    +PN   YN  + G C+  +     E
Sbjct: 277 TPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGE 333

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M    C  ++ ++++L +  C++  V+ A+ +  +M   G +P VV YNTL     
Sbjct: 334 LIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFS 393

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           E  +V+ AL L D M  +    DT ++   +  LC+     +  EL   +    C L   
Sbjct: 394 EQGRVDDALMLLDSMLCN---PDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEM 450

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LID LC+ G +  A E+F  +P     P++VTY+ +I G    G ++ A +LF  M
Sbjct: 451 TFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSM 510

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
                 PD+ +++ ++ G  R        EL+  M  K   P+    +I+++ L +   +
Sbjct: 511 ---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFA 567

Query: 574 LKSLPSF 580
            +++  F
Sbjct: 568 DRAIEVF 574



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 216/449 (48%), Gaps = 25/449 (5%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           + + M+R +  P  V+ F   + S  +N   D       R+   G  P++  Y+ L+N F
Sbjct: 232 LMEEMIRNNCHPNEVT-FATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGF 290

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
            + GRV    +    +L     PN   +N+ +KGL    R  +   L  ++    C PN 
Sbjct: 291 SEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNE 347

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            T++ L + LC+ G    A+ + E+M          C+P+ V Y+T+I+   ++G VD A
Sbjct: 348 ATFSMLTSCLCQHGLVDCAMEVVEQMQKYG------CRPDVVIYNTLINYFSEQGRVDDA 401

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L   M     NPD +++N+ +  LC    W + + L  +M+ +      +TFN+++D 
Sbjct: 402 LMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDS 458

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LC++  ++ A  + + M +    P+  TY++L++GF   G +  A ELF   +SM CK D
Sbjct: 459 LCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELF---QSMPCKPD 515

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             SYN ++ G C+    E+A  L   M  K   P  +T+N L   L +    + A+++F 
Sbjct: 516 IFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFK 575

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   G   D  TY   I+G  + G + +A+ L  T+    C+ D  +YN  + GLC++ 
Sbjct: 576 QMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM---SCKPDAISYNSTLKGLCRAE 632

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           R K A E+   +      PN VT+    Q
Sbjct: 633 RWKEAEEIVAEMLRKKCPPNEVTFKYANQ 661



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 161/317 (50%), Gaps = 9/317 (2%)

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           +  L    D + A RL +  M     P+V+  N+++ +LC +R++ +A R+LD + + G 
Sbjct: 83  LRRLVQLEDLDAALRL-VGSMPSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESG- 140

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
             +A ++NTL+ G+C  G++  AE +  + +  G   + V+Y  LINGYC++  + +AL+
Sbjct: 141 SADAVSHNTLVAGYCRDGRLADAERVLEAAKVSG-AANVVTYTALINGYCRSGRLADALN 199

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L   + S  + P   TYNT+  GL    Q E A +L +EM R+    +  T+ T I   C
Sbjct: 200 L---IASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFC 256

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           +NG +  AV+L   +    C  D+  Y+ L++G  + GR+  A  L  ++   +  PN V
Sbjct: 257 QNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTM---LCKPNTV 313

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            YN  ++GLC   +     +L  +M      P+  TF ML     +        E++ +M
Sbjct: 314 CYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQM 373

Query: 549 KEKKVMPDASIVSIVVD 565
           ++    PD  I + +++
Sbjct: 374 QKYGCRPDVVIYNTLIN 390



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 51/282 (18%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-KHYDTR-LNATGLFPNL----YTYNI 101
           ++A  + D ML      P   SFN  L +L +  + YD   L A  L  +      T+NI
Sbjct: 399 DDALMLLDSML----CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNI 454

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+  C+ G V+     F ++ +   TP+  T++SLI G   +  +  A  LF   ++  
Sbjct: 455 LIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELF---QSMP 511

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C+P++ +YN ++ GLCR      A  L   MA  +      C PN +T++ +I+ LC++G
Sbjct: 512 CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKD------CPPNEITFNILINSLCQKG 565

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHG------------------------------ 251
           F D+A  +F QM +    PD+ TYN+LI+G                              
Sbjct: 566 FADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCKPDAISYNSTL 625

Query: 252 --LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
             LC A  W EA+ +  EM+ +   P+ VTF         NR
Sbjct: 626 KGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYANQLFIPNR 667


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/408 (33%), Positives = 219/408 (53%), Gaps = 9/408 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+A + N L+  L A  R+  A   F         P++ T+N +I+GLC+TG    A ++
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK---AKALFLQMKDENINPDVVTY 245
            +++            P+ VTY+TIIDG CK G   +     AL  +M +  I+P+ VT+
Sbjct: 208 AKDIRAWG------LAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTF 261

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N L++G C  ++   A R+F EM  QG+  SVVT++ ++  LC   K++E  +L+D M  
Sbjct: 262 NVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKD 321

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ PN  T N++++GFC  G +  AE    SME    K + V+Y IL++GY +  ++++
Sbjct: 322 LGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKD 381

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           AL++   M  KG++P    YN L  G            L DEM+  GV AD  TY   I 
Sbjct: 382 ALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIG 441

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LC  G + +AV+L   + ++  E     YN +I+G C+ G +K A+E+   +  G    
Sbjct: 442 ALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRA 501

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           NVVTYN+ I+ LC  G+M++  +L  +M E    P+ +T+D +  G +
Sbjct: 502 NVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMM 549



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 232/454 (51%), Gaps = 18/454 (3%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +L +  +  P++S+   L  LA + H   R       P+ ++ N L++      RV L  
Sbjct: 120 VLALASASQPLASYEAFL--LAGDAHPRHR-------PSAFSVNRLLSALVAAERVDLAE 170

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
            AF   LR   +P+  TFN +I GL    ++ +A  +   ++A+G  P+V+TYNT+I+G 
Sbjct: 171 RAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGY 230

Query: 177 CRTGHT--MIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           C+ G    M  ++ L +EM     E G+   PN VT++ +++G CK+     A  +F +M
Sbjct: 231 CKRGRAGRMYHVDALLKEMV----EAGI--SPNEVTFNVLVNGYCKDSNTAAAVRVFEEM 284

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           K + I   VVTY++L+ GLC      E  +L  EM D G+ P++ T N +++  CK   M
Sbjct: 285 KQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMM 344

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A   +D M Q+ V+PN  TY  L+DG+  + K+  A  +  +M   G + +   YN L
Sbjct: 345 TDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCL 404

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I G+ +N +      L  EM  KG++  +VTYN L   L    +V  A+KL DEM   G+
Sbjct: 405 IAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGL 464

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
                TY T I+G C+ G I  A E+   +   K   ++  YN  I  LC+ G+++   E
Sbjct: 465 EPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNE 524

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           L   +    LVPN VTY+ + +G+   G     R
Sbjct: 525 LLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVR 558



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 169/351 (48%), Gaps = 38/351 (10%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P   + N L+  L  A   + A+R F   + + V P + TFN+++  LCK  ++ +A  +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINR---AEELFGSMESMGCKHDDVSYNILING 356
              +   G+ P+  TYNT++DG+C  G+  R    + L   M   G   ++V++N+L+NG
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           YCK+     A+ ++ EM  +GI  +VVTY+ L  GL    +VE  +KL DEM+  G+  +
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 417 TRTYTTFIDGLCKNGYIIEA----------------------VELFRTLRILKCELDIQA 454
             T  + ++G CK G + +A                      V+ +R L  +K  L ++ 
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 455 -------------YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                        YNCLI G  ++G  +    L   +    +  ++VTYN++I  LC  G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           ++ KA  L  +M      P  +T++ +I+G+          E+  +M++ K
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGK 498



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 152/303 (50%), Gaps = 4/303 (1%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +PS  + N ++  L    ++D A R     ++R V P+  T+N ++ G C  G++ +A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL---SLYREMVSKGIKPTVVTYNTLFL 390
           +   + + G     V+YN +I+GYCK           +L +EMV  GI P  VT+N L  
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +      A+++F+EM++ G+AA   TY+  + GLC  G + E V+L   ++ L    
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++   N +++G CK G +  A     S+    + PNVVTY I++ G     +M  A  + 
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL-VK 569
             M      P+   ++ LI GF R  +   V+ LL +M+ K V  D    ++++  L VK
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446

Query: 570 NEI 572
            E+
Sbjct: 447 GEV 449


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 219/386 (56%), Gaps = 15/386 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F+ ML M  +PP V  FN +L S A  KHY T      RL   G+ P+ +T NI
Sbjct: 52  DDAVSQFNSMLCMRHTPP-VIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+NCFC +G+++ GF    +IL+  + P+  TF +LIKGL  + ++ +A     KL A G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            + + ++Y TLING+C+ G T  A+ L  ++       G + KPN   Y+TIID LCK  
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKID------GRLTKPNVEMYNTIIDALCKYQ 224

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A  LF +M  + I+ +VV+YN +I G C +   +EA  LF EM  + + P++VT+ 
Sbjct: 225 LVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYG 284

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            +MD LCK+ ++     L+D M  RG+  +  TYN+L+DG C  G ++RA  LF  M+  
Sbjct: 285 SLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDX 344

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
             + D +++ IL++G CK   +++A  +++++++K     V  YN +  G  +   +E A
Sbjct: 345 --RFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEA 402

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGL 427
           L +  +M+ +G      T+   I+ L
Sbjct: 403 LTMRSKMEDNGCIPSAVTFEIIINAL 428



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 216/400 (54%), Gaps = 8/400 (2%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A + F  +      P VI +N +++      H   A++L   +     E+  + +P+  
Sbjct: 53  DAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRL-----ELKGI-QPDFF 106

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T + +++  C  G ++   ++  ++      P  +T+ +LI GLC     N+A     ++
Sbjct: 107 TLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 166

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + QG++   V++  +++ +CK      A +L+  +  R  +PN   YNT++D  C    +
Sbjct: 167 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 226

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  LF  M + G   + VSYNI+I G+CK+K V+EAL+L++EM  K + PT+VTY +L
Sbjct: 227 SEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSL 286

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +  ++ +  +L DEM   G+ AD  TY + IDGLCKNG++  A+ LF  ++  + 
Sbjct: 287 MDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXR- 345

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D   +  L+DGLCK GRLK A E+F  L       +V  YN+MI G C  G +++A  
Sbjct: 346 -FDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALT 404

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +   ME+N   P  +TF+++I+     +E  K  +LLH+M
Sbjct: 405 MRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 175/343 (51%), Gaps = 2/343 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A + F  M      P V+ +N ++        ++ A  L   +  +G+QP   T N+
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +M+  C   +++    +L  +++RG +P+  T+ TL+ G CL G++N+A      + + G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D VSY  LING CK  +   A+ L R++  +  KP V  YNT+   L +   V  A 
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF EM   G++A+  +Y   I G CK+  + EA+ LF+ +        I  Y  L+DGL
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CKSGR+ + WEL   +    +  +V+TYN +I GLC +G +D+A  LF  M++     D 
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DR 348

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +TF +L+ G  +        E+   +  K+   D    +++++
Sbjct: 349 LTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMIN 391



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 35/253 (13%)

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           ++ A   F SM  M      + +N +++ +   K    A+SL   +  KGI+P   T N 
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L      + Q+     +  ++ + G    T T+TT I GLC  G + +A+          
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFH------- 163

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
                       D L   G +KF               + V+Y  +I G+C  G    A 
Sbjct: 164 ------------DKLLAQG-IKF---------------DQVSYGTLINGVCKIGDTRGAI 195

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            L   ++     P+V  ++ +I    +    S+   L  +M  K +  +    +I++   
Sbjct: 196 KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGF 255

Query: 568 VKNEISLKSLPSF 580
            K+++  ++L  F
Sbjct: 256 CKSKMVDEALNLF 268


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 262/513 (51%), Gaps = 13/513 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  F  L+   AK    D+ L+      ++ L  ++  YN+ I+ F K+G+V + +  
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  I  +   P+  T+ S+I  L   +R+ EA  +F  L+     P    YNT+I G   
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A +L E      G I     P+ + Y+ I+  L K G VD+A  +F +MK ++ 
Sbjct: 321 AGKFDEAYSLLERQ-RAKGSI-----PSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDA 373

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++ TYN LI  LC A   + A  L   M   G+ P+V T N+++D LCK++K+DEA  
Sbjct: 374 APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M  +   P+  T+ +L+DG   +G+++ A +++  M    C+ + + Y  LI  + 
Sbjct: 434 IFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFF 493

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            +   E+   +Y++MV++   P +   NT    +F+  + E    +F+E++      D R
Sbjct: 494 NHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR 553

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y+  I GL K G+  E  ELF +++   C LD +AYN +IDG CK G++  A++L   +
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P VVTY  +I GL    ++D+A  LF + +      +V+ +  LI GF ++   
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +   +L ++ +K + P+    + ++D LVK E
Sbjct: 674 DEAYLILEELMQKGLTPNVYTWNSLLDALVKAE 706



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 267/546 (48%), Gaps = 14/546 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F++ L  +   P   ++N ++        +D       R  A G  P++  YN 
Sbjct: 290 DEAVEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++ C  K+G+V      F  + +    PN +T+N LI  L    ++  A  L   ++  G
Sbjct: 349 ILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAG 407

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV T N +++ LC++     A  +FE+M         VC P+ +T+ ++IDGL K G
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYK------VCTPDEITFCSLIDGLGKVG 461

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A  ++ +M D +   + + Y SLI    +     +  +++ +M++Q   P +   N
Sbjct: 462 RVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLN 521

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             MD + K  + ++   + + +  R   P+A +Y+ L+ G    G  N   ELF SM+  
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D  +YNI+I+G+CK  +V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF+E +   +  +   Y++ IDG  K G I EA  +   L       ++  +N L+D 
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDA 701

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L K+  +  A   F S+      PN VTY I+I GLC   + +KA   + +M++    P 
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            I++  +I G  +    ++   L  + K    +PD++  + +++ L     ++ +   F 
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

Query: 582 VQERQG 587
              R+G
Sbjct: 822 ETRRRG 827



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 261/529 (49%), Gaps = 12/529 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNIL 102
           +EA+ + +   R   S P V ++N +L  L K    D  L           PNL TYNIL
Sbjct: 325 DEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNIL 383

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C+ G++   F     + ++   PN  T N ++  L    ++ EA A+F ++    C
Sbjct: 384 IDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVC 443

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ IT+ +LI+GL + G    A  ++E+M + +      C+ N++ Y+++I      G 
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD------CRTNSIVYTSLIKNFFNHGR 497

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            +    ++  M ++N +PD+   N+ +  +  A +  + + +F E+  +   P   ++++
Sbjct: 498 KEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSI 557

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  L K    +E   L   M ++G   +   YN ++DGFC  GK+N+A +L   M++ G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            +   V+Y  +I+G  K   ++EA  L+ E  SK I+  VV Y++L  G  ++ +++ A 
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            + +E+ + G+  +  T+ + +D L K   I EA+  F++++ LKC  +   Y  LI+GL
Sbjct: 678 LILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK  +   A+  +  +    + P+ ++Y  MI GL   G + +A  LF   + N   PD 
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             ++ +I G    N       L  + + + +        +++D L KN+
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKND 846



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 266/557 (47%), Gaps = 36/557 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           N A   F +  R    P    S+N LL  +A+ +++D        ++  G  P++ T   
Sbjct: 79  NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIE 138

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++    K  ++  GF     + +  F P  + + +LI    A +       LF +++  G
Sbjct: 139 MVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---------------GEIGVV---- 202
            EP V  + TLI G  + G    AL+L +EM + +               G++G V    
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258

Query: 203 ----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                      KP+ VTY+++I  LCK   +D+A  +F  ++     P    YN++I G 
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A  ++EA  L      +G  PSV+ +N I+  L K  K+DEA R+ + M ++   PN 
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNL 377

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN L+D  C  GK++ A EL  SM+  G   +  + NI+++  CK+++++EA +++ +
Sbjct: 378 STYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQ 437

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  K   P  +T+ +L  GL ++ +V+ A K++++M       ++  YT+ I     +G 
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             +  ++++ +    C  D+Q  N  +D + K+G  +    +F  +     VP+  +Y+I
Sbjct: 498 KEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSI 557

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I GL   G  ++  +LF  M+E     D   ++++I GF +  + +K  +LL +MK K 
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617

Query: 553 VMPDASIVSIVVDLLVK 569
             P       V+D L K
Sbjct: 618 FEPTVVTYGSVIDGLAK 634



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 244/524 (46%), Gaps = 13/524 (2%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N+ + S  K    D        + A GL P+  TY  +I   CK  R+      F  + 
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           ++   P    +N++I G  +  +  EA +L  + +A G  P+VI YN ++  L + G   
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            AL +FEEM            PN  TY+ +ID LC+ G +D A  L   M+   + P+V 
Sbjct: 361 EALRVFEEMKKDAA-------PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVR 413

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T N ++  LC +   +EA  +F +M  +   P  +TF  ++D L K  ++D+A ++ + M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKM 473

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +    R N+  Y +L+  F   G+     +++  M +  C  D    N  ++   K  E 
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           E+  +++ E+ S+   P   +Y+ L  GL +        +LF  M+  G   DTR Y   
Sbjct: 534 EKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG CK G + +A +L   ++    E  +  Y  +IDGL K  RL  A+ LF       +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             NVV Y+ +I G    G++D+A  +  ++ +    P+V T++ L+   ++  E ++   
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALV 713

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               MKE K  P+     I+++ L K     K+   +   ++QG
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 222/469 (47%), Gaps = 7/469 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G +  + F P+  T   ++      +++ E   +   ++ F   P    Y TLI     
Sbjct: 121 LGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSA 180

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             H+ + L LF++M     E+G   +P    ++T+I G  KEG VD A +L  +MK  ++
Sbjct: 181 VNHSDMMLTLFQQMQ----ELGY--EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + D+V YN  I         + A + F E+   G++P  VT+  ++  LCK  ++DEA  
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + + +    P    YNT++ G+   GK + A  L     + G     ++YN ++    
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR 354

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V+EAL ++ EM  K   P + TYN L   L    +++ A +L D MQ+ G+  + R
Sbjct: 355 KMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVR 413

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T    +D LCK+  + EA  +F  +    C  D   +  LIDGL K GR+  A++++  +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKM 473

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                  N + Y  +I+   N G+ +    ++ DM     +PD+   +  +    +  EP
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            K   +  ++K ++ +PDA   SI++  L+K   + ++   F   + QG
Sbjct: 534 EKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 169/351 (48%), Gaps = 6/351 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+L   N  ++C  K G    G   F  I    F P+A +++ LI GL       E   L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYEL 574

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +K  GC  +   YN +I+G C+ G    A  L EEM     E      P  VTY ++
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE------PTVVTYGSV 628

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGL K   +D+A  LF + K + I  +VV Y+SLI G       +EA  +  E+M +G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+V T+N ++D L K  +++EA      M +    PN  TY  L++G C + K N+A  
Sbjct: 689 TPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            +  M+  G K   +SY  +I+G  K   + EA +L+    + G  P    YN +  GL 
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
             ++   A  LF+E +R G+    +T    +D L KN  + +A  +   LR
Sbjct: 809 NGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 165/331 (49%), Gaps = 7/331 (2%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +YNSL+  +    +++   ++  EM   G  PSV T   ++    K  K+ E   ++  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +   RP    Y TL+  F  +   +    LF  M+ +G +     +  LI G+ K   V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + ALSL  EM S  +   +V YN       ++ +V+ A K F E++ +G+  D  TYT+ 
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 424 IDGLCKNGYIIEAVELFRTL---RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           I  LCK   + EAVE+F  L   R + C     AYN +I G   +G+   A+ L      
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPC---TYAYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
              +P+V+ YN ++  L   G++D+A  +F +M+++ AAP++ T+++LI    R  +   
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDC 395

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             EL   M++  + P+   V+I+VD L K++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 5/231 (2%)

Query: 328 INRAEELFGSMES-MGCKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +NRA E F   E      H   SYN  +L+   C+N +  +   +  EM   G  P+V T
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMSVAGFGPSVNT 135

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
              + L   + +++     +   M++         YTT I       +    + LF+ ++
Sbjct: 136 CIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            L  E  +  +  LI G  K GR+  A  L   +    L  ++V YN+ I      G++D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            A   F ++E N   PD +T+  +I    + N   +  E+   +++ + +P
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 234/477 (49%), Gaps = 9/477 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++   N ++       R          +L+    P+  T+N+L+     E R  + 
Sbjct: 191 GVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKI 250

Query: 151 AALFTKLKAFG--CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
             L  +++A G  C PN +TYN +I GL R G+   A  L EEM           K ++ 
Sbjct: 251 DMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-------KASSF 303

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +I GL   GFV K   L L+M++E I P VVTYN++IHGL  +     A+  F+EM
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G+ P V+T+N +++  CK     EA  L   + + G+ P   TYN L+DG+C +G +
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 423

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L   M   GC  D  +Y IL+ G      +      + EM+SKG++P    YNT 
Sbjct: 424 EEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTR 483

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                 +  +  + +L + +  +G+++DT TY   IDGLCK G + +A EL   +     
Sbjct: 484 ICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGL 543

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D   Y CLI   C+ G L+ A + F  +    L P+ VTY ++I   C  G +  A  
Sbjct: 544 QPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYG 603

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            F  M E    P+ IT+++LIH   R+          ++M E+ ++P+    ++++D
Sbjct: 604 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLID 660



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/440 (31%), Positives = 217/440 (49%), Gaps = 15/440 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATG--LFPNLYTYNILINCFCKIGRVSLGF 116
           P + ++N LL S +K    D        + A G    PN  TYN++I    + G      
Sbjct: 229 PSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKG-YLEEA 287

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                 +R     ++ T+N LI GL A   + +   L  +++  G  P V+TYN +I+GL
Sbjct: 288 AELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGL 347

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            ++G    A   F EM      +G++  P+ +TY+++++G CK G   +A  LF  ++  
Sbjct: 348 LQSGQIEAAQAKFVEMR----AMGLL--PDVITYNSLLNGYCKAGNQKEALLLFGDLRRA 401

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + P V+TYN LI G C   D  EA+RL  EM++QG  P V T+ ++M        +   
Sbjct: 402 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMT 461

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
               D M+ +G+RP+   YNT +     +G I+++ +L   +   G   D V+YNILI+G
Sbjct: 462 REFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDG 521

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK   +++A  L  +M+S G++P  +TY  L     E   +  A K F++M  DG+   
Sbjct: 522 LCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPS 581

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT  I   C+ G +  A   FR +     E +   YN LI  LC+ GR + A+  F 
Sbjct: 582 AVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFY 641

Query: 477 SLPHGVLVPNVVTYNIMIQG 496
            +    LVPN  TY ++I G
Sbjct: 642 EMLERGLVPNKYTYTLLIDG 661


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 246/507 (48%), Gaps = 18/507 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N LL +L     +       T +   GL PN++TYNIL+   CK  RV      
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P+A T+ +++  L    +I +A  L  + K     P+V  YN LI+G+C+
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +A+ L  EM + NG       PN V+YS II+ LC  G V+ A ALF QM     
Sbjct: 257 EGRIEVAIKLLGEMMD-NG-----VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + ++ T+  LI G        EA  L+  M+  G +P+VV +N ++  LC N  ++EA +
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + D M + G  PN  TY+ L+DGF   G +  A E +  M S GC+ + V+Y  +++  C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           KN   ++A SL  +M  +G  P  +T+NT   GL    +VE A+KL + MQ  G   +  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +D L +     EA  LF+ +     + ++  YN ++ G  ++G +  A +LF   
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE-NAAAPDVITFDMLIHGFIRINE 537
                 P+ +TYN MI   C  G++  A  L   +       PD+IT+  LI G      
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMN 610

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
             +    L K   + + P+ +  + +V
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 237/491 (48%), Gaps = 47/491 (9%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +IN + ++G        F RI      P    +N L+  L +E++      L+T +K  G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV TYN L+  LC+      A  LF EM+N        C P+ VTY+T++  LCK G
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG------CPPDAVTYTTMVSSLCKAG 228

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A+ L  + K     P V  YN+LI G+C       A +L  EMMD GV P+VV+++
Sbjct: 229 KIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 282 VIMDELCKN-----------------------------------RKMDEASRLLDLMVQR 306
            I++ LC +                                    K+ EA  L  LM+Q 
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  PN   YNTL+ G C  G +  A ++   M+  GC  +  +Y+ILI+G+ K+ ++  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
              +  M+S G +P VVTY  +   L +    + A  L ++M  +G   +T T+ TFI G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC NG +  A++L   ++   C  +I  YN L+D L +  + + A+ LF  +    L PN
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +VTYN ++ G    G M +A  LF        APD IT++ +IH + +  +     +L+ 
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 547 KMKE-KKVMPD 556
           ++   K+  PD
Sbjct: 584 RVSSMKEWHPD 594



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 234/476 (49%), Gaps = 20/476 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++NILL +L KN   D        ++  G  P+  TY  +++  CK G++      
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            GR     F P+   +N+LI G+  E RI  A  L  ++   G +PNV++Y+ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G+  +A  LF +M          C  N  T++ +I G    G + +A  L+  M  +  
Sbjct: 292 SGNVELAFALFAQMFLRG------CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VV YN+LIHGLC      EA ++  +M   G  P+V T+++++D   K+  +  AS 
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             + M+  G RPN  TY  ++D  C     ++A  L   M   GC  + +++N  I G C
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLC 465

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            N  VE A+ L   M   G  P + TYN L   LF +++ E A  LF E++   +  +  
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + G  + G + EA++LF    +     D   YN +I   CK G++K A +L   +
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 479 PH-GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA-APDVITFDMLIHGF 532
                  P+++TY  +I G CN   +++A   FLD   N    P+  T++ L+  F
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAM-AFLDKAINQGICPNFATWNALVRCF 640



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 219/434 (50%), Gaps = 8/434 (1%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLF-PNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           PP   ++  +++SL K    D      G F P++  YN LI+  CK GR+ +     G +
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           + +   PN  +++ +I  L     +  A ALF ++   GC+ N+ T+  LI G    G  
Sbjct: 271 MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL+L++ M          C+PN V Y+T+I GLC  G +++A  +  QM+     P+V
Sbjct: 331 YEALDLWKLMIQDG------CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ LI G   + D   A   +  M+  G +P+VVT+  ++D LCKN   D+A+ L++ 
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G  PN  T+NT + G C  G++  A +L   M+  GC  +  +YN L++   +  +
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            EEA  L++E+ ++ ++P +VTYNT+  G      +  AL+LF +    G A D+ TY T
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564

Query: 423 FIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            I   CK G +  A +L   +  +K    DI  Y  LI G C    ++ A        + 
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624

Query: 482 VLVPNVVTYNIMIQ 495
            + PN  T+N +++
Sbjct: 625 GICPNFATWNALVR 638



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 218/423 (51%), Gaps = 11/423 (2%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F  +I G        +A  +F ++  FGC+P V  YN L++ L       +   L+  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
             +G I     PN  TY+ ++  LCK   VD A  LF++M ++   PD VTY +++  LC
Sbjct: 172 K-DGLI-----PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A   ++A+ L         +PSV  +N ++D +CK  +++ A +LL  M+  GV PN  
Sbjct: 226 KAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y+ +++  C+ G +  A  LF  M   GC  +  ++  LI G     ++ EAL L++ M
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +  G +P VV YNTL  GL     +E AL++ D+MQR G   +  TY+  IDG  K+G +
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
           + A E +  +    C  ++  Y C++D LCK+     A  L   +      PN +T+N  
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I+GLC +G+++ A  L   M+ +   P++ T++ L+    R+N+  +   L  +++ + +
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 554 MPD 556
            P+
Sbjct: 521 QPN 523



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 196/387 (50%), Gaps = 10/387 (2%)

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           L  F  +AN N       +    TY  +I+ L +E  +D  + +  QMK + IN     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             +I+G        +A ++F  + + G +P+V  +N ++D L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ PN  TYN L+   C   +++ A +LF  M + GC  D V+Y  +++  CK  ++++
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A    RE+  +  KP+V  YN L  G+ +  ++E A+KL  EM  +GV  +  +Y+  I+
Sbjct: 233 A----RELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LC +G +  A  LF  + +  C+ +I  +  LI G    G+L  A +L+  +      P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NVV YN +I GLC++G +++A  +   M+ +   P+V T+ +LI GF +  +    +E  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEI 572
           ++M      P+    + +VD+L KN +
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSM 434



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 166/323 (51%), Gaps = 7/323 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+  YN LI+  C  G +        ++ RS   PN  T++ LI G      ++ A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           +  + ++ + GC PNV+TY  +++ LC+      A +L E+M          C PNT+T+
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG------CTPNTITF 457

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T I GLC  G V+ A  L  +M+     P++ TYN L+  L   N + EA  LF E+  
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + +QP++VT+N ++    +   M EA +L    + RG  P++ TYNT++  +C  GK+  
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577

Query: 331 AEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           A +L   + SM   H D ++Y  LI G C    +EEA++   + +++GI P   T+N L 
Sbjct: 578 AAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637

Query: 390 LGLFEIHQVEHALKLFDEMQRDG 412
              F+       + + D++ R G
Sbjct: 638 RCFFDSLGHMGPIHILDDILRKG 660


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 236/471 (50%), Gaps = 16/471 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +  TG+ P++YTY ILI+CF K G +         ++R    P   T+ +LI       +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI------- 199
           +  A  LF  + A GC PNVITY  LI+G C++G+   A  ++  M  G+ +I       
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYF 633

Query: 200 ----GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                V  KPN VTY  ++DGLCK   V  A+ L   M  +   P+ + Y++LI G C A
Sbjct: 634 KIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
              +EA+ +F +M+++G  P+V T++ ++D L K++++D   ++L  M++    PN   Y
Sbjct: 694 AKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIY 753

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             ++DG   + K + A +L   ME  GCK + V+Y  +I+G+ K  +V++ L L+REM S
Sbjct: 754 TEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGS 813

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KG  P  VTY  L         ++ A  L +EM++        +Y   I+G  K  +I+ 
Sbjct: 814 KGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFIL- 871

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT--YNIM 493
           ++ L   +        I  Y  LID   K+GRL+ A EL   +    +        Y  +
Sbjct: 872 SLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSL 931

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           I       ++D A +LF DM  +   PD+ TF  L+ G IR+    +  +L
Sbjct: 932 IYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 233/503 (46%), Gaps = 30/503 (5%)

Query: 86  RLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           R+ +T   PN+ TY IL+ C C    ++GR     I    I   C+ P+   FNSL+   
Sbjct: 333 RMRSTSCIPNVQTYRILL-CGCLNKKQLGRCKR--ILSMMIAEGCY-PSYTIFNSLVHAY 388

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM--IALNLFEEMANGNGEI 199
                   A  L  K++   C+P  + YN LI  +C  G     +   L E+  N     
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448

Query: 200 GVVC-KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
           G V  K N V+++     LC  G  +KA  +  +M      PD  TY+ +I  LC+A+  
Sbjct: 449 GTVLNKVNVVSFARC---LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRV 505

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
             A  LF EM   GV P V T+ +++D   K   + +A   LD MV+ G  P   TY TL
Sbjct: 506 ENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTL 565

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  +    K++ A ELF  M + GC  + ++Y  LI+GYCK+  +E+A  +Y  M     
Sbjct: 566 IHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625

Query: 379 ----------------KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
                           KP VVTY  L  GL + H+V+ A  L + M  DG   +T  Y  
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG CK   + EA E+F  +       ++  Y+ LID L K  RL    ++   +    
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             PN+V Y  MI GL    + D+A  L L MEE    P+V+T+  +I GF +  +  K  
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 543 ELLHKMKEKKVMPDASIVSIVVD 565
           EL  +M  K   P+    +++++
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLIN 828



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 231/518 (44%), Gaps = 28/518 (5%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
           F   L  + K +   + +      PN   YN +I+  C+            R+  +   P
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  T+  L+ G   + ++     + + + A GC P+   +N+L++  C++     A  L 
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV------DKAKALFLQMKDENINPDVV 243
           ++M          CKP  V Y+ +I  +C  G +      + A+  + +M       + V
Sbjct: 402 KKMEKCE------CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
              S    LC    + +A ++  EMM  G  P   T++ ++  LC   +++ A  L   M
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              GV P+  TY  L+D F   G I +A      M   GC+   V+Y  LI+ Y K K+V
Sbjct: 516 KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV 575

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR----- 418
             A  L+  M++KG  P V+TY  L  G  +   +E A +++  M+ D    D       
Sbjct: 576 SVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKI 635

Query: 419 -----------TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
                      TY   +DGLCK   + +A +L  T+ +  CE +   Y+ LIDG CK+ +
Sbjct: 636 KNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L  A E+F  +      PNV TY+ +I  L  D ++D    +   M EN+ AP+++ +  
Sbjct: 696 LDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +I G  ++ +  +  +L+  M+EK   P+    + ++D
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 793



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 226/530 (42%), Gaps = 37/530 (6%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
            N+L+    +N  ++       RL   G  P   TYN L+  F +  ++    +    + 
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
               + +  T     + L    +  EA +L  K       PN I YN +I+GLC      
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV---PNTILYNKMISGLCEASFFE 325

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A++    M + +      C PN  TY  ++ G   +  + + K +   M  E   P   
Sbjct: 326 EAMDFLNRMRSTS------CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYT 379

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM------DEAS 297
            +NSL+H  C ++D++ A +L  +M     +P  V +N+++  +C   ++      + A 
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +  + M+  G   N     +     C  GK  +A ++   M   G   D  +Y+ +I   
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    VE A  L++EM   G+ P V TY  L     +   ++ A    DEM RDG     
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYTT I    K   +  A ELF  +    C  ++  Y  LIDG CKSG ++ A +++  
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 478 LPHGVLVP----------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +     +P                NVVTY  ++ GLC   ++  ARDL   M  +   P+
Sbjct: 620 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 679

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            I +D LI GF +  +  +  E+ HKM E+   P+    S ++D L K++
Sbjct: 680 TIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDK 729



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 246/551 (44%), Gaps = 37/551 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+    +    DT       ++  GL  + +T        CK+G+      A
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWRE---A 295

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              I +  F PN   +N +I GL   S   EA     ++++  C PNV TY  L+ G C 
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-CL 354

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               +        M    G     C P+   +++++   CK      A  L  +M+    
Sbjct: 355 NKKQLGRCKRILSMMIAEG-----CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC 409

Query: 239 NPDVVTYNSLIHGLCHAND------WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            P  V YN LI  +C   +      +  A++ + EM+  G   + V        LC   K
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK 469

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            ++A +++  M+  G  P+  TY+ ++   C   ++  A  LF  M+  G   D  +Y I
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+ + K   +++A +   EMV  G +PTVVTY TL     +  +V  A +LF+ M   G
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLR----ILKCEL------------DIQAYN 456
              +  TYT  IDG CK+G I +A +++  +R    I   ++            ++  Y 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+DGLCK+ ++K A +L  ++      PN + Y+ +I G C   ++D+A+++F  M E 
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVER 709

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              P+V T+  LI    +      V ++L KM E    P+  I + ++D L K   + ++
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769

Query: 577 LPSFLVQERQG 587
               L+ E +G
Sbjct: 770 YKLMLMMEEKG 780



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 194/441 (43%), Gaps = 59/441 (13%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+ +  K K           + A G FPN+ TY  LI+ +CK G +      
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616

Query: 119 FGRILRSC----------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           + R+                      PN  T+ +L+ GL    ++ +A  L   +   GC
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV-------------------- 202
           EPN I Y+ LI+G C+      A  +F +M        V                     
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLK 736

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN V Y+ +IDGL K    D+A  L L M+++   P+VVTY ++I G  
Sbjct: 737 VLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A   ++   LF EM  +G  P+ VT+ V+++  C    +DEA  LL+ M Q     +  
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y  +++G+    +   +  L   +E  G     + Y +LI+ + K   +E AL L++E+
Sbjct: 857 SYCKVIEGY--KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEV 914

Query: 374 VSKGIKPTVVT--YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           +S  +  T     Y +L        +++HA +LF +M RDGV  D  T+   + GL +  
Sbjct: 915 ISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 974

Query: 432 YIIEAVELFRTLRILKCELDI 452
              EA++L  +L    C++DI
Sbjct: 975 RWEEALQLSDSL----CQMDI 991


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 269/545 (49%), Gaps = 49/545 (8%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFC 107
           F+ ++R+ P P  V +F+ L+ +  K  + D        +   G+ P+L  Y+ILI+   
Sbjct: 295 FNMVVRIGPKPN-VVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLF 353

Query: 108 KIGRVS------------------LGFIA-----------------FGRILRSCFTPNAA 132
           K GR+                   +GF +                 + R+L    +PN  
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           + + LIKG     RI+EA  LF ++   G EP+++TY+ LI G C++G+      L+E+M
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                 I   C+P+T+ YS +I+GLCK+G V  A   F Q  +  ++P+V T N+L+   
Sbjct: 474 ------IKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSF 527

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C       A +++  M    ++   VT+ +++    +  ++DEA  L   M+++  +P+ 
Sbjct: 528 CRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDV 587

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY TL+DG C + K +    +F  M       D   YN+LIN + +   +E AL L+  
Sbjct: 588 ITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVH 647

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           +V +G KP V T+NT+        +++ A++LF +M  + +  +  T+T  ID  C+ G 
Sbjct: 648 VVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGR 707

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKS-GRLKFAWELFCSLPHGVLVPNVVTYN 491
           + +A+ +F  +     E ++  Y+CLI G  KS   ++   +L+  +    + PN+V+Y+
Sbjct: 708 MDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYS 767

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           I+I GLC  G M +A   F    +    PDVI + +LI G+ ++   ++   L   M   
Sbjct: 768 ILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLN 827

Query: 552 KVMPD 556
           ++ PD
Sbjct: 828 RLTPD 832



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 247/477 (51%), Gaps = 7/477 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+ T++ LI+ +CK G +   F+ F  +  +  TP+   ++ LI GL    R+ +   L
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRL 364

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
                  G + +V+ +++ ++   + G     + +++ M N          PN V+ S +
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG------ISPNVVSCSIL 418

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G C+ G + +A  LF+Q+      P ++TY++LI G C + +  +   L+ +M+ +  
Sbjct: 419 IKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRC 478

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P  + ++V+++ LCK   + +A R     V RG+ PN  T NTL+D FC +  I  A +
Sbjct: 479 EPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMK 538

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           ++  M  +  K D V+Y ILI G  +   V+EAL L+ +M+ K  KP V+TY TL  GL 
Sbjct: 539 VYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLC 598

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           ++ +    L +FD M ++ VA D   Y   I+   + G++  A+ LF  +     + D+ 
Sbjct: 599 KLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVF 658

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N +I   C   RL  A +LF  +    L PN +T+ I+I   C +G+MD A  +F  M
Sbjct: 659 TFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKM 718

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVN-ELLHKMKEKKVMPDASIVSIVVDLLVK 569
            E    P+++T+  LIHG+ +     +   +L ++M E  + P+    SI++D L K
Sbjct: 719 LEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCK 775



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 240/468 (51%), Gaps = 6/468 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            Y  ++N F   G V +G      +++  F  +  T N ++KG+  ++ I  A   F  +
Sbjct: 239 VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMV 298

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G +PNV+T++TLI+  C+ G+   A  LF+ MA GNG       P+ + YS +IDGL
Sbjct: 299 VRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMA-GNG-----VTPDLIVYSILIDGL 352

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            K G ++  + L L   D+ I  DVV ++S +       D     +++  M+++G+ P+V
Sbjct: 353 FKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNV 412

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           V+ ++++   C+N ++ EA  L   +++ G  P+  TY+ L+ GFC  G +     L+  
Sbjct: 413 VSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYED 472

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M    C+ D + Y++LING CK   V +AL  + + V++G+ P V T NTL      +  
Sbjct: 473 MIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKC 532

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +  A+K++  M    + ADT TYT  I G  + G + EA+ LF  +     + D+  Y  
Sbjct: 533 IVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCT 592

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LIDGLCK  +      +F  +    + P++  YN++I     +G ++ A  LF+ + E  
Sbjct: 593 LIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERG 652

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             PDV TF+ +I  +          +L  KM  +++ P+A   +I++D
Sbjct: 653 PKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILID 700



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 13/331 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNL------YTYNILINCFCKIGRVSLGFIA 118
           P V + N LL S  + K     +    L   L       TY ILI    + GRV    + 
Sbjct: 515 PNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALML 574

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++L+  F P+  T+ +LI GL    +      +F  +      P++  YN LIN   R
Sbjct: 575 FFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSR 634

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            GH   AL LF  +           KP+  T++T+I   C    +D A  LF +M  E +
Sbjct: 635 EGHLEAALGLFVHVVERGP------KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQL 688

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS- 297
            P+ +T+  LI   C     ++A  +F +M+++G +P++VT++ ++    K++ M E+  
Sbjct: 689 RPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGL 748

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L + M++  + PN  +Y+ L+DG C  G +  A   F          D ++Y ILI GY
Sbjct: 749 KLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGY 808

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           CK   + EA+ LY  M+   + P      TL
Sbjct: 809 CKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 177/394 (44%), Gaps = 35/394 (8%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQ--MKDENINPDVV--TYNSLIHGLC-------- 253
           ++V Y  +I+  C++G  DK+  +F+   +K   ++P+VV     SLI   C        
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 254 -----------------------HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
                                  +  +     R    ++  G    ++T N I+  +   
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQ 285

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
             +  A    +++V+ G +PN  T++TL+D +C  G +++A  LF  M   G   D + Y
Sbjct: 286 NDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVY 345

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           +ILI+G  K   +E+   L    + KGIK  VV +++      +I  +   ++++  M  
Sbjct: 346 SILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLN 405

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           +G++ +  + +  I G C+NG I+EA  LF  +  L  E  I  Y+ LI G CKSG L+ 
Sbjct: 406 EGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRD 465

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
            + L+  +      P+ + Y+++I GLC  G +  A   F        +P+V T + L+ 
Sbjct: 466 GFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            F R+       ++ + M    +  D    +I++
Sbjct: 526 SFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILI 559



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 18/280 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL--------NATGLFPNLYTY 99
           +EA  +F  ML+     P V ++  L+  L K K     L        NA    P++  Y
Sbjct: 569 DEALMLFFQMLK-KDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVA--PDIAIY 625

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+LIN   + G +      F  ++     P+  TFN++I       R+ +A  LF K+ +
Sbjct: 626 NVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTS 685

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
               PN IT+  LI+  CR G    A+ +F +M     E      PN VTYS +I G  K
Sbjct: 686 EQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPE------PNLVTYSCLIHGYFK 739

Query: 220 -EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            +  ++    L+ +M + NI P++V+Y+ LI GLC      EA   F   +D+ + P V+
Sbjct: 740 SQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVI 799

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
            + +++   CK  ++ EA  L D M+   + P+     TL
Sbjct: 800 AYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/297 (19%), Positives = 124/297 (41%), Gaps = 43/297 (14%)

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNAC--TYNTLMDGFCLMGKINRAEE 333
           V +  +++  C+    D++  +   +  +G  V PN       +L+D  C+   +++  E
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L  +M     +     Y  ++N +    EVE  L  ++ +V  G    ++T N +  G++
Sbjct: 228 LCSAMR----EQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIW 283

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
             + +  A   F+ + R G   +  T++T                               
Sbjct: 284 MQNDIGVADDYFNMVVRIGPKPNVVTFST------------------------------- 312

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
               LID  CK G L  A+ LF  +    + P+++ Y+I+I GL   G+++  + L L  
Sbjct: 313 ----LIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVA 368

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +     DV+ F   +  +++I +  +V ++  +M  + + P+    SI++    +N
Sbjct: 369 LDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQN 425


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 237/491 (48%), Gaps = 47/491 (9%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +IN + ++G        F RI      P    +N L+  L +E++      L+T +K  G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV TYN L+  LC+      A  LF EM+N        C P+ VTY+T++  LCK G
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG------CPPDAVTYTTMVSSLCKAG 228

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A+ L  + K     P V  YN+LI G+C       A +L  EMMD GV P+VV+++
Sbjct: 229 KIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 282 VIMDELCKN-----------------------------------RKMDEASRLLDLMVQR 306
            I++ LC +                                    K+ EA  L  LM+Q 
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  PN   YNTL+ G C  G +  A ++   M+  GC  +  +Y+ILI+G+ K+ ++  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
              +  M+S G +P VVTY  +   L +    + A  L ++M  +G   +T T+ TFI G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC NG +  A++L   ++   C  +I  YN L+D L +  + + A+ LF  +    L PN
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +VTYN ++ G    G M +A  LF        APD IT++ +IH + +  +     +L+ 
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 547 KMKE-KKVMPD 556
           ++   K+  PD
Sbjct: 584 RVSSMKEWHPD 594



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 246/507 (48%), Gaps = 18/507 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N LL +L     +       T +   GL PN++TYNIL+   CK  RV      
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKL 201

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      P+A T+ +++  L    +I +A  L  + K     P+V  YN LI+G+C+
Sbjct: 202 FVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCK 256

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +A+ L  EM + NG       PN V+YS II+ LC  G V+ A ALF QM     
Sbjct: 257 EGRIEVAIKLLGEMMD-NG-----VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + ++ T+  LI G        EA  L+  M+  G +P+VV +N ++  LC N  ++EA +
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + D M + G  PN  TY+ L+DGF   G +  A E +  M S GC+ + V+Y  +++  C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           KN   ++A SL  +M  +G  P  +T+NT   GL    +VE A+KL + MQ  G   +  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +D L +     EA  LF+ +     + ++  YN ++ G  ++G +  A +LF   
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE-NAAAPDVITFDMLIHGFIRINE 537
                 P+ +TYN MI   C  G++  A  L   +       PD+IT+  LI G      
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMN 610

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
             +    L K   + + P+ +  + +V
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 234/476 (49%), Gaps = 20/476 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++NILL +L KN   D        ++  G  P+  TY  +++  CK G++      
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            GR     F P+   +N+LI G+  E RI  A  L  ++   G +PNV++Y+ +IN LC 
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G+  +A  LF +M          C  N  T++ +I G    G + +A  L+  M  +  
Sbjct: 292 SGNVELAFALFAQMFLRG------CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VV YN+LIHGLC      EA ++  +M   G  P+V T+++++D   K+  +  AS 
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             + M+  G RPN  TY  ++D  C     ++A  L   M   GC  + +++N  I G C
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLC 465

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            N  VE A+ L   M   G  P + TYN L   LF +++ E A  LF E++   +  +  
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T + G  + G + EA++LF    +     D   YN +I   CK G++K A +L   +
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585

Query: 479 PH-GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA-APDVITFDMLIHGF 532
                  P+++TY  +I G CN   +++A   FLD   N    P+  T++ L+  F
Sbjct: 586 SSMKEWHPDIITYTSLIWGACNWMNIEEAM-AFLDKAINQGICPNFATWNALVRCF 640



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 219/434 (50%), Gaps = 8/434 (1%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLF-PNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           PP   ++  +++SL K    D      G F P++  YN LI+  CK GR+ +     G +
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           + +   PN  +++ +I  L     +  A ALF ++   GC+ N+ T+  LI G    G  
Sbjct: 271 MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKL 330

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL+L++ M          C+PN V Y+T+I GLC  G +++A  +  QM+     P+V
Sbjct: 331 YEALDLWKLMIQDG------CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ LI G   + D   A   +  M+  G +P+VVT+  ++D LCKN   D+A+ L++ 
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G  PN  T+NT + G C  G++  A +L   M+  GC  +  +YN L++   +  +
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            EEA  L++E+ ++ ++P +VTYNT+  G      +  AL+LF +    G A D+ TY T
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564

Query: 423 FIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            I   CK G +  A +L   +  +K    DI  Y  LI G C    ++ A        + 
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624

Query: 482 VLVPNVVTYNIMIQ 495
            + PN  T+N +++
Sbjct: 625 GICPNFATWNALVR 638



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 218/423 (51%), Gaps = 11/423 (2%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F  +I G        +A  +F ++  FGC+P V  YN L++ L       +   L+  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
             +G I     PN  TY+ ++  LCK   VD A  LF++M ++   PD VTY +++  LC
Sbjct: 172 K-DGLI-----PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A   ++A+ L         +PSV  +N ++D +CK  +++ A +LL  M+  GV PN  
Sbjct: 226 KAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVV 280

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y+ +++  C+ G +  A  LF  M   GC  +  ++  LI G     ++ EAL L++ M
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +  G +P VV YNTL  GL     +E AL++ D+MQR G   +  TY+  IDG  K+G +
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
           + A E +  +    C  ++  Y C++D LCK+     A  L   +      PN +T+N  
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTF 460

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I+GLC +G+++ A  L   M+ +   P++ T++ L+    R+N+  +   L  +++ + +
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNL 520

Query: 554 MPD 556
            P+
Sbjct: 521 QPN 523



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 180/358 (50%), Gaps = 5/358 (1%)

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           II+G  + G  ++A  +F ++ +    P V  YN L+  L   N +     L+  M   G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+V T+N+++  LCKN ++D A +L   M  +G  P+A TY T++   C  GKI+ A 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           EL G       K     YN LI+G CK   +E A+ L  EM+  G+ P VV+Y+ +   L
Sbjct: 235 ELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                VE A  LF +M   G  A+  T+T  I G    G + EA++L++ +    CE ++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            AYN LI GLC +G L+ A ++   +     +PNV TY+I+I G    G +  A + +  
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           M  +   P+V+T+  ++    + +   + N L+ KM  +   P+    +  +  L  N
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGN 467



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 196/387 (50%), Gaps = 10/387 (2%)

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           L  F  +AN N       +    TY  +I+ L +E  +D  + +  QMK + IN     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             +I+G        +A ++F  + + G +P+V  +N ++D L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ PN  TYN L+   C   +++ A +LF  M + GC  D V+Y  +++  CK  ++++
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A    RE+  +  KP+V  YN L  G+ +  ++E A+KL  EM  +GV  +  +Y+  I+
Sbjct: 233 A----RELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LC +G +  A  LF  + +  C+ +I  +  LI G    G+L  A +L+  +      P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NVV YN +I GLC++G +++A  +   M+ +   P+V T+ +LI GF +  +    +E  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEI 572
           ++M      P+    + +VD+L KN +
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSM 434



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 166/323 (51%), Gaps = 7/323 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+  YN LI+  C  G +        ++ RS   PN  T++ LI G      ++ A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           +  + ++ + GC PNV+TY  +++ LC+      A +L E+M          C PNT+T+
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG------CTPNTMTF 457

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T I GLC  G V+ A  L  +M+     P++ TYN L+  L   N + EA  LF E+  
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + +QP++VT+N ++    +   M EA +L    + RG  P++ TYNT++  +C  GK+  
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKI 577

Query: 331 AEELFGSMESMGCKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           A +L   + SM   H D ++Y  LI G C    +EEA++   + +++GI P   T+N L 
Sbjct: 578 AAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637

Query: 390 LGLFEIHQVEHALKLFDEMQRDG 412
              F+       + + D++ R G
Sbjct: 638 RCFFDSLGHMGPIHILDDILRKG 660


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 238/475 (50%), Gaps = 12/475 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ PN  +Y +++  +CK+G V       G ++   F  + AT + +++    +  + 
Sbjct: 195 ARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVT 254

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A   F +    G  PN+I +  +I GLC+ G    A  + EEM      +G   KPN  
Sbjct: 255 RALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEM------VGRGWKPNVY 308

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           T++ +IDGLCK+G+ +KA  LFL++ + EN  P+V+TY ++I G C     N A+ L   
Sbjct: 309 THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSR 368

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M +QG+ P+  T+  ++D  CK    + A  L+++M + G  PN CTYN ++DG C  G+
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A ++  S    G   D V+Y ILI+ +CK  E+++AL L+ +MV  GI+P + +Y T
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTT 488

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L        +++ +   F+E  R G+    +TYT+ I G C+ G +  A++ F  +    
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C  D   Y  LI GLCK  +L  A  L+ ++    L P  VT   +    C   ++D   
Sbjct: 549 CASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC---KIDDGC 605

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
              + +E       V T + L+       +        HK+ +K   P+ + V+I
Sbjct: 606 SAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKD--PNVNRVTI 658



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 246/525 (46%), Gaps = 18/525 (3%)

Query: 41  DINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNL- 96
           D N +T ++A  I   +     S   +S FN  +AS +K +H+ TRL    A  L  N  
Sbjct: 70  DPNSLTHDQAVTIVASLASDAGSMVALSFFNWAIAS-SKFRHF-TRLYIACAASLISNKN 127

Query: 97  -----YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
                     ++  F +IGRV         +      P+  T N ++K +     +  A 
Sbjct: 128 FEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAE 187

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            LF ++ A G +PN ++Y  ++ G C+ G+ + +    +    G  E G V   +  T S
Sbjct: 188 NLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLES----DRWLGGMIERGFVV--DNATLS 241

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            I+   C++GFV +A   F +  +  + P+++ +  +I GLC      +A  +  EM+ +
Sbjct: 242 LIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR 301

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           G +P+V T   ++D LCK    ++A RL L L+     +PN  TY  ++ G+C   K+NR
Sbjct: 302 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNR 361

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE L   M+  G   +  +Y  LI+G+CK    E A  L   M  +G  P V TYN +  
Sbjct: 362 AEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVD 421

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +V+ A K+     R+G+ AD  TYT  I   CK   I +A+ LF  +     + 
Sbjct: 422 GLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQP 481

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI +Y  LI   C+  R+K +   F       LVP   TY  MI G C +G +  A   F
Sbjct: 482 DIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFF 541

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             M ++  A D IT+  LI G  + ++  +   L   M EK + P
Sbjct: 542 HRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTP 586



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 187/397 (47%), Gaps = 10/397 (2%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           Y  R    GL PNL  +  +I   CK G V   F     ++   + PN  T  +LI GL 
Sbjct: 259 YFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLC 318

Query: 143 AESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
            +    +A  LF KL ++   +PNV+TY  +I+G CR       +N  E + +   E G+
Sbjct: 319 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDE----KMNRAEMLLSRMKEQGL 374

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              PNT TY+T+IDG CK G  ++A  L   M +E  +P+V TYN+++ GLC      EA
Sbjct: 375 A--PNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            ++       G+    VT+ +++ E CK  ++ +A  L + MV+ G++P+  +Y TL+  
Sbjct: 433 YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAV 492

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           FC   ++  +E  F      G    + +Y  +I GYC+   +  AL  +  M   G    
Sbjct: 493 FCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASD 552

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            +TY  L  GL +  +++ A  L+D M   G+     T  T     CK   I +      
Sbjct: 553 SITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCK---IDDGCSAMV 609

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            L  L+ +L ++  N L+  LC   ++  A   F  L
Sbjct: 610 VLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKL 646



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 206/469 (43%), Gaps = 18/469 (3%)

Query: 113 SLGFIAFGRILRSC---------FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           S  F  F R+  +C         F         ++K      R+ EA  +  ++   G  
Sbjct: 105 SSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLA 164

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           P+  T N ++  +   G    A NLF+EM A G        +PN V+Y  ++ G CK G 
Sbjct: 165 PSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG-------VQPNCVSYRVMVVGYCKLGN 217

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V ++      M +     D  T + ++   C       A   F    + G++P+++ F  
Sbjct: 218 VLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTC 277

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESM 341
           +++ LCK   + +A  +L+ MV RG +PN  T+  L+DG C  G   +A  LF  +  S 
Sbjct: 278 MIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSE 337

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
             K + ++Y  +I+GYC+++++  A  L   M  +G+ P   TY TL  G  +    E A
Sbjct: 338 NHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERA 397

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L + M  +G + +  TY   +DGLCK G + EA ++ ++      + D   Y  LI  
Sbjct: 398 YELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISE 457

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            CK   +K A  LF  +    + P++ +Y  +I   C + +M ++   F +       P 
Sbjct: 458 HCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPT 517

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             T+  +I G+ R        +  H+M +     D+     ++  L K 
Sbjct: 518 NKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQ 566



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 199/428 (46%), Gaps = 19/428 (4%)

Query: 163 EPNVITYN---TLINGLCRTGHTMIALNLFEEMANGNG-----EIGVVCKPNTVT----- 209
           +PN +T++   T++  L     +M+AL+ F      +       + + C  + ++     
Sbjct: 70  DPNSLTHDQAVTIVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFE 129

Query: 210 -----YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
                   ++    + G V +A  + ++M ++ + P   T N ++  +        A+ L
Sbjct: 130 KAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENL 189

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F EM  +GVQP+ V++ V++   CK   + E+ R L  M++RG   +  T + ++  FC 
Sbjct: 190 FDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCE 249

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G + RA   F     MG + + +++  +I G CK   V++A  +  EMV +G KP V T
Sbjct: 250 KGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYT 309

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQR-DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +  L  GL +    E A +LF ++ R +    +  TYT  I G C++  +  A  L   +
Sbjct: 310 HTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRM 369

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +      +   Y  LIDG CK+G  + A+EL   +      PNV TYN ++ GLC  G++
Sbjct: 370 KEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRV 429

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A  +      N    D +T+ +LI    +  E  +   L +KM +  + PD    + +
Sbjct: 430 QEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTL 489

Query: 564 VDLLVKNE 571
           + +  + +
Sbjct: 490 IAVFCREK 497


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 259/538 (48%), Gaps = 45/538 (8%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYN 100
           P++A  IF  M  +    P + S+N LL +L ++  +D            GL PNL TYN
Sbjct: 94  PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYN 153

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ILI   C+  +          +    F+P+  ++ +LI  L     + +A  LF ++   
Sbjct: 154 ILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPER 213

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+V  YN LI+G  + G  + A  ++E +  G         PN  +Y+ +I+GLCK 
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS-----VYPNIPSYNVMINGLCKC 268

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP----- 275
           G  D++  ++ +MK      D+ TY++LIHGLC + + + A R++ EM + GV P     
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328

Query: 276 -----------------------------SVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
                                        +VV++N+++  L +N K+DEA  + +L+ ++
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
               ++ TY  L+ G C  G +N+A  +    E+     D  +Y+ +ING C+   ++E 
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             +  +M   G KP     N +  G     ++E AL+ F  M   G      TY T I+G
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           L K     EA  L + +     + ++  Y+ L++GLC+  +L  A  L+C        P+
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           V  +NI+I GLC+ G+++ A  L+ +M++    P+++T + L+ GF ++ +  + +++
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKI 626



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 224/444 (50%), Gaps = 8/444 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   ++NSL+  L   ++  EA + F   +  G  PN+ TYN LI   CR        + 
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQ----FDK 167

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            +E+ N   E G    P+  +Y T+I+ L K G++  A  LF +M +  + PDV  YN L
Sbjct: 168 AKELLNWMWEQGF--SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225

Query: 249 IHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           I G     D   A  ++  ++    V P++ ++NV+++ LCK  K DE+  +   M +  
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              +  TY+TL+ G C  G ++ A  ++  M   G   D V YN ++NGY +   +EE L
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L++ M  +G + TVV+YN L  GLFE  +V+ A+ +++ +      AD+ TY   + GL
Sbjct: 346 ELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CKNGY+ +A+ +       + +LD  AY+ +I+GLC+ GRL     +   +      PN 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
              N +I G     +++ A   F +M      P V+T++ LI+G  +    S+   L+ +
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKE 524

Query: 548 MKEKKVMPDASIVSIVVDLLVKNE 571
           M  K   P+    S++++ L + +
Sbjct: 525 MLHKGWKPNMITYSLLMNGLCQGK 548



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 223/453 (49%), Gaps = 16/453 (3%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHT 182
           + C  P      ++IK     S   +A  +F ++ + FGC+P + +YN+L+N L  +   
Sbjct: 72  QKCKCPEDVAL-TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 130

Query: 183 MIALNLF---EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
             A + F   E M            PN  TY+ +I   C++   DKAK L   M ++  +
Sbjct: 131 DEAESFFLYFETMG---------LSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PDV +Y +LI+ L      ++A +LF EM ++GV P V  +N+++D   K   +  AS +
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 300 LDLMVQ-RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            + +++   V PN  +YN +++G C  GK + + E++  M+      D  +Y+ LI+G C
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            +  ++ A  +Y+EM   G+ P VV YNT+  G     ++E  L+L+  M+++G      
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT-VV 360

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y   I GL +N  + EA+ ++  L    C  D   Y  L+ GLCK+G L  A  +    
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            +G    +   Y+ MI GLC +G++D+   +   M ++   P+    + +I+GF+R ++ 
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
                    M  K   P     + +++ L K E
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 183/326 (56%), Gaps = 7/326 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++  YN ++N + + GR+    +   +++         ++N LI+GL   +++ EA
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIE-ECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEA 378

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +++  L    C  + +TY  L++GLC+ G+   AL++ EE  NG G++      +T  Y
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL------DTFAY 432

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S++I+GLC+EG +D+   +  QM      P+    N++I+G   A+   +A R F  M+ 
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P+VVT+N +++ L K  +  EA  L+  M+ +G +PN  TY+ LM+G C   K++ 
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  L+      G K D   +NI+I+G C + +VE+AL LY EM  +   P +VT+NTL  
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLME 612

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAAD 416
           G +++   E A K++D + +   +++
Sbjct: 613 GFYKVRDFERASKIWDHILQSWSSSN 638



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 2/318 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G   +   F+ I+  L   + +   SR+++L+  +  +       T++  +      ++A
Sbjct: 38  GYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQA 97

Query: 332 EELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
            ++F  M E  GC+    SYN L+N   ++ + +EA S +    + G+ P + TYN L  
Sbjct: 98  LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 157

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
                 Q + A +L + M   G + D  +Y T I+ L KNGY+ +A++LF  +       
Sbjct: 158 ISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 217

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV-PNVVTYNIMIQGLCNDGQMDKARDL 509
           D+  YN LIDG  K G +  A E++  L  G  V PN+ +YN+MI GLC  G+ D++ ++
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +  M++N    D+ T+  LIHG            +  +M E  V PD  + + +++  ++
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337

Query: 570 NEISLKSLPSFLVQERQG 587
                + L  + V E++G
Sbjct: 338 AGRIEECLELWKVMEKEG 355



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 15/254 (5%)

Query: 69  SFNILLASLAKNKHYDTRL-------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           ++ +L+  L KN + +  L       N  G   + + Y+ +IN  C+ GR+        +
Sbjct: 396 TYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAYSSMINGLCREGRLDEVAGVLDQ 454

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           + +    PN    N++I G    S++ +A   F  + + GC P V+TYNTLINGL +   
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A  L +EM +         KPN +TYS +++GLC+   +D A  L+ Q  ++   PD
Sbjct: 515 FSEAYALVKEMLHKGW------KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V  +N +IHGLC +    +A +L+ EM  +   P++VT N +M+   K R  + AS++ D
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWD 628

Query: 302 LMVQRGVRPNACTY 315
            ++Q     N C Y
Sbjct: 629 HILQSWSSSN-CYY 641



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 2/211 (0%)

Query: 361 KEVEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           K    ALS++  +    G   T   ++ +   LF+   V H  ++ + ++          
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 420 YTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
             T I    KN    +A+++F R   I  C+  I++YN L++ L +S +   A   F   
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 140

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L PN+ TYNI+I+  C   Q DKA++L   M E   +PDV ++  LI+   +    
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           S   +L  +M E+ V PD +  +I++D   K
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFK 231


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 232/441 (52%), Gaps = 16/441 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN YTYN LI+  C+ G+V         +L     P+  T+N L++         +A  L
Sbjct: 165 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 224

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              ++A GC PN +TYN L++G+C  G    AL L   + +        CKP+TV Y+T+
Sbjct: 225 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG------CKPSTVNYNTV 278

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC       A  L  +M  EN  P+  T+N +I+ LC      +A +L  +M   G 
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             ++VT+N I++ LC+ R +D A  LL  M   G +P+  TYNTL+ G C   +   AEE
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L  +M   GC  D+V++N LI   C+   + +A+ ++++M  KG  P  +TY+T+  GL 
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  +++ AL+LF+EM   G   D + Y    + L  +  I EA++  R L+         
Sbjct: 459 KATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 517

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++ GLC++G+ +FA ++   +     +P+ +TY I+I+GL  +G +++AR+L + +
Sbjct: 518 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577

Query: 514 EENAAAPDVITFDMLIHGFIR 534
                     + D+L++  I+
Sbjct: 578 ---------CSRDVLVNSLIK 589



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 239/505 (47%), Gaps = 52/505 (10%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT---FNSLIKGLHAESRIMEA 150
           P+    N L+   C+ GR         R++ +C    AAT   + +L  G     R+ +A
Sbjct: 101 PDAALANRLVRDLCRRGRPD----DAERVVGACGP--AATVVAYGALTDGYCRAGRLGDA 154

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +   +     +PN  TYN LI+ LC  G    AL++ ++M      +   C P+ VTY
Sbjct: 155 RRVVGGMPV---QPNAYTYNPLIHTLCERGQVRDALSVLDDM------LCRGCAPDVVTY 205

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +++  CK     +A  L   M+ E   P+ VTYN L+ G+C   D ++A  L   +  
Sbjct: 206 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS 265

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G +PS V +N ++  LC   +  +A  L+  M++    PN  T+N ++   C  G + +
Sbjct: 266 HGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQ 325

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   M   GC  + V+YN +ING C+ + V+ A+ L  +M S G KP +VTYNTL  
Sbjct: 326 AIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK 385

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL    Q   A +L D M ++G   D  T+ T I  LC+ G +++A+E+F+ +    C  
Sbjct: 386 GLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTP 445

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPH------------------------------ 480
           +   Y+ +I GL K+ +L  A ELF  + H                              
Sbjct: 446 NSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVR 505

Query: 481 ----GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
                 + P+ V YN ++ GLC +G+ + A D+   M  +   PD +T+ +LI G     
Sbjct: 506 KLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEG 565

Query: 537 EPSKVNELLHKMKEKKVMPDASIVS 561
             ++  ELL K+  + V+ ++ I S
Sbjct: 566 YLNEARELLIKLCSRDVLVNSLIKS 590



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 167/327 (51%), Gaps = 13/327 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           L  H   P   ++N +L  L   + +       T +      PN  T+N++I   C+ G 
Sbjct: 263 LPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGL 322

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +        ++ +   T N  T+N++I GL  +  +  A  L +K+K++GC+P+++TYNT
Sbjct: 323 LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNT 382

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+ GLC     + A  L + M   NG     C P+ VT++T+I  LC++G +  A  +F 
Sbjct: 383 LLKGLCSAAQWVDAEELMDNMTQ-NG-----CLPDNVTFNTLIGFLCQKGLMVDAIEVFK 436

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM D+   P+ +TY+++I GL  A   ++A  LF EM  +G  P  + + ++ + L  + 
Sbjct: 437 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDD 495

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            ++EA + +  +   G+ P+   YN ++ G C  GK   A ++   M S GC  DD++Y 
Sbjct: 496 TIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYV 555

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGI 378
           ILI G      + EA  L  ++ S+ +
Sbjct: 556 ILIEGLAYEGYLNEARELLIKLCSRDV 582



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 6/348 (1%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD    N L+  LC     ++A+R+       G   +VV +  + D  C+  ++ +A R+
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRV 157

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M    V+PNA TYN L+   C  G++  A  +   M   GC  D V+YNIL+   CK
Sbjct: 158 VGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            +   +A+ L   M ++G  P  VTYN L  G+     V+ AL+L   +   G    T  
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T + GLC      +A EL   +    C  +   +N +I  LC+ G L+ A +L   + 
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                 N+VTYN +I GLC    +D A  L   M+     PD++T++ L+ G     +  
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              EL+  M +   +PD    + ++  L +  + + ++  F     +G
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 442


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 262/513 (51%), Gaps = 13/513 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  F  L+   AK    D+ L+      ++ L  ++  YN+ I+ F K+G+V + +  
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  I  +   P+  T+ S+I  L   +R+ EA  +F  L+     P    YNT+I G   
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A +L E      G I     P+ + Y+ I+  L K G VD+A  +F +MK ++ 
Sbjct: 321 AGKFDEAYSLLERQ-RAKGSI-----PSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDA 373

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++ TYN LI  LC A   + A  L   M   G+ P+V T N+++D LCK++K+DEA  
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M  +   P+  T+ +L+DG   +G+++ A +++  M    C+ + + Y  LI  + 
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            +   E+   +Y++M+++   P +   NT    +F+  + E    +F+E++      D R
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y+  I GL K G+  E  ELF +++   C LD +AYN +IDG CK G++  A++L   +
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P VVTY  +I GL    ++D+A  LF + +      +V+ +  LI GF ++   
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +   +L ++ +K + P+    + ++D LVK E
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 267/546 (48%), Gaps = 14/546 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  +F++ L  +   P   ++N ++        +D       R  A G  P++  YN 
Sbjct: 290 DEAVEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++ C  K+G+V      F  + +    PN +T+N LI  L    ++  A  L   ++  G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV T N +++ LC++     A  +FEEM         VC P+ +T+ ++IDGL K G
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK------VCTPDEITFCSLIDGLGKVG 461

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A  ++ +M D +   + + Y SLI    +     +  +++ +M++Q   P +   N
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             MD + K  + ++   + + +  R   P+A +Y+ L+ G    G  N   ELF SM+  
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D  +YNI+I+G+CK  +V +A  L  EM +KG +PTVVTY ++  GL +I +++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             LF+E +   +  +   Y++ IDG  K G I EA  +   L       ++  +N L+D 
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L K+  +  A   F S+      PN VTY I+I GLC   + +KA   + +M++    P 
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            I++  +I G  +    ++   L  + K    +PD++  + +++ L     ++ +   F 
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821

Query: 582 VQERQG 587
              R+G
Sbjct: 822 ETRRRG 827



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 261/529 (49%), Gaps = 12/529 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNIL 102
           +EA+ + +   R   S P V ++N +L  L K    D  L           PNL TYNIL
Sbjct: 325 DEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNIL 383

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C+ G++   F     + ++   PN  T N ++  L    ++ EA A+F ++    C
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ IT+ +LI+GL + G    A  ++E+M + +      C+ N++ Y+++I      G 
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD------CRTNSIVYTSLIKNFFNHGR 497

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            +    ++  M ++N +PD+   N+ +  +  A +  + + +F E+  +   P   ++++
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  L K    +E   L   M ++G   +   YN ++DGFC  GK+N+A +L   M++ G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            +   V+Y  +I+G  K   ++EA  L+ E  SK I+  VV Y++L  G  ++ +++ A 
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            + +E+ + G+  +  T+ + +D L K   I EA+  F++++ LKC  +   Y  LI+GL
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK  +   A+  +  +    + P+ ++Y  MI GL   G + +A  LF   + N   PD 
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             ++ +I G    N       L  + + + +        +++D L KN+
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 239/477 (50%), Gaps = 9/477 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P    Y  LI  F  +    +    F ++    + P    F +LI+G   E R+  A +L
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYST 212
             ++K+   + +++ YN  I+   + G   +A   F E+ ANG        KP+ VTY++
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG-------LKPDEVTYTS 278

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I  LCK   +D+A  +F  ++     P    YN++I G   A  ++EA  L      +G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             PSV+ +N I+  L K  K+DEA ++ + M ++   PN  TYN L+D  C  GK++ A 
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAF 397

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           EL  SM+  G   +  + NI+++  CK+++++EA +++ EM  K   P  +T+ +L  GL
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            ++ +V+ A K++++M       ++  YT+ I     +G   +  ++++ +    C  D+
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           Q  N  +D + K+G  +    +F  +     VP+  +Y+I+I GL   G  ++  +LF  
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M+E     D   ++++I GF +  + +K  +LL +MK K   P       V+D L K
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 244/524 (46%), Gaps = 13/524 (2%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N+ + S  K    D        + A GL P+  TY  +I   CK  R+      F  + 
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           ++   P    +N++I G  +  +  EA +L  + +A G  P+VI YN ++  L + G   
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            AL +FEEM            PN  TY+ +ID LC+ G +D A  L   M+   + P+V 
Sbjct: 361 EALKVFEEMKKD-------AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T N ++  LC +   +EA  +F EM  +   P  +TF  ++D L K  ++D+A ++ + M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +    R N+  Y +L+  F   G+     +++  M +  C  D    N  ++   K  E 
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           E+  +++ E+ ++   P   +Y+ L  GL +        +LF  M+  G   DTR Y   
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG CK G + +A +L   ++    E  +  Y  +IDGL K  RL  A+ LF       +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             NVV Y+ +I G    G++D+A  +  ++ +    P++ T++ L+   ++  E ++   
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
               MKE K  P+     I+++ L K     K+   +   ++QG
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 169/351 (48%), Gaps = 6/351 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+L   N  ++C  K G    G   F  I    F P+A +++ LI GL       E   L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +K  GC  +   YN +I+G C+ G    A  L EEM     E      P  VTY ++
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE------PTVVTYGSV 628

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           IDGL K   +D+A  LF + K + I  +VV Y+SLI G       +EA  +  E+M +G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P++ T+N ++D L K  +++EA      M +    PN  TY  L++G C + K N+A  
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            +  M+  G K   +SY  +I+G  K   + EA +L+    + G  P    YN +  GL 
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
             ++   A  LF+E +R G+    +T    +D L KN  + +A  +   LR
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 6/375 (1%)

Query: 197 GEIGVVC-KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
           GE+ V    P+  T   ++ G  K   + +   +   M+     P    Y +LI      
Sbjct: 122 GEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
           N  +    LF +M + G +P+V  F  ++    K  ++D A  LLD M    +  +   Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N  +D F  +GK++ A + F  +E+ G K D+V+Y  +I   CK   ++EA+ ++  +  
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
               P    YNT+ +G     + + A  L +  +  G       Y   +  L K G + E
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+++F  ++      ++  YN LID LC++G+L  A+EL  S+    L PNV T NIM+ 
Sbjct: 362 ALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            LC   ++D+A  +F +M+     PD ITF  LI G  ++    +V++  +K+ EK +  
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV---GRVDD-AYKVYEKMLDS 476

Query: 556 DASIVSIVVDLLVKN 570
           D    SIV   L+KN
Sbjct: 477 DCRTNSIVYTSLIKN 491



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 36/326 (11%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +YNSL+  +    +++   ++  EM   G  PSV T   ++    K  K+ E   ++ +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +   RP    Y TL+  F                      H D+               
Sbjct: 160 RKFKFRPAFSAYTTLIGAFS------------------AVNHSDM--------------- 186

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
              L+L+++M   G +PTV  + TL  G  +  +V+ AL L DEM+   + AD   Y   
Sbjct: 187 --MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ID   K G +  A + F  +     + D   Y  +I  LCK+ RL  A E+F  L     
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP    YN MI G  + G+ D+A  L        + P VI ++ ++    ++ +  +  +
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
           +  +MK K   P+ S  +I++D+L +
Sbjct: 365 VFEEMK-KDAAPNLSTYNILIDMLCR 389



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 5/231 (2%)

Query: 328 INRAEELFGSMESMG-CKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +NRA E F   E      H   SYN  +L+   C+N +  +   +  EM   G  P+V T
Sbjct: 78  VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMSVAGFGPSVNT 135

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
              + LG  + +++     +   M++         YTT I       +    + LF+ ++
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            L  E  +  +  LI G  K GR+  A  L   +    L  ++V YN+ I      G++D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            A   F ++E N   PD +T+  +I    + N   +  E+   +++ + +P
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 227/433 (52%), Gaps = 40/433 (9%)

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTIIDGLCKEGFVDKAK 227
           ++NG C+ G+ ++  NL  ++ +      ++    C+ N V+Y+ +I GLC+ G VD+  
Sbjct: 1   MVNGYCKLGN-LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F +M++++  P V TY  ++H L  +    EA  LF EM ++G +P++ T+ V+++ +
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK  K++E  R+LD MV++G+ P+  TYN L+DG+C  G +  A+E+   M S  C  ++
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            +YN LI G+C+ K V  A++L  +M+   + P+VVTYN+L  G  +I  ++ A +L + 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M  +GV  D  TY+ FID LCK G I EA  LF +L+    + +   Y  LIDG CK+G+
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLC----------------------------- 498
           +  A  L   +     +PN  TYN +I GLC                             
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 499 ------NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
                  +G  D A  +   M  +   PDV  +   IH F       +  +++  M E+ 
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 553 VMPDASIVSIVVD 565
           VMPDA   ++V+D
Sbjct: 420 VMPDALTYTLVID 432



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 225/444 (50%), Gaps = 6/444 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N  +Y  LI+  C++GRV  G   F ++      P   T+  ++  L    R MEA
Sbjct: 34  GCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEA 93

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF++++  GCEPN+ TY  +IN +C+         + +EM     E G+V  P+  TY
Sbjct: 94  INLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV----EKGLV--PSVPTY 147

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +IDG CKEG V+ A+ +   M   + NP+  TYN LI G C   + + A  L  +M++
Sbjct: 148 NALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLE 207

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             + PSVVT+N ++   CK   +D A RLL+LM + GV P+  TY+  +D  C  G+I  
Sbjct: 208 SRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEE 267

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  LF S++  G K ++V Y  LI+GYCK  ++++A SL   M+++   P   TYN L  
Sbjct: 268 ANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALID 327

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +V+ AL L + M + G+     TYT  I  + K G    A  +   +     + 
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQP 387

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  Y   I   C  G +K A ++   +    ++P+ +TY ++I      G ++ A D+ 
Sbjct: 388 DVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVL 447

Query: 511 LDMEENAAAPDVITFDMLIHGFIR 534
             M +    P   T+  LI   ++
Sbjct: 448 KRMFDTGCDPSHHTYSCLIKHLLK 471



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 232/485 (47%), Gaps = 19/485 (3%)

Query: 102 LINCFCKIGR---------VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           ++N +CK+G          V+  F  F  + +     N  ++ +LI GL    R+ E   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F K++   C P V TY  +++ L  +G  M A+NLF EM     E G  C+PN  TY+ 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR----ERG--CEPNIHTYTV 114

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I+ +CKE  +++ + +  +M ++ + P V TYN+LI G C       A+ +   M    
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P+  T+N ++   C+ + +  A  LL  M++  + P+  TYN+L+ G C +G ++ A 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   M   G   D  +Y++ I+  CK   +EEA  L+  +  KGIK   V Y  L  G 
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL--RILKCEL 450
            +  +++ A  L D M  +    ++ TY   IDGLCK   + EA+ L  ++  + LKC  
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKC-- 352

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
            +  Y  LI  + K G   +A  +   +      P+V  Y   I   C  G + +A D+ 
Sbjct: 353 TVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMM 412

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             M E    PD +T+ ++I  +  +   +   ++L +M +    P     S ++  L+K 
Sbjct: 413 SMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE 472

Query: 571 EISLK 575
           E++ K
Sbjct: 473 ELTKK 477



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 161/566 (28%), Positives = 249/566 (43%), Gaps = 40/566 (7%)

Query: 8   NRSFS-FASAPISAFRSNFSSL--LVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
           N +FS F   P    R N  S   L+H        G   V   +E   IF  M R     
Sbjct: 21  NSAFSVFNMMPKKGCRRNEVSYTNLIH--------GLCEVGRVDEGINIFKKM-REDDCY 71

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P V ++ +++ +L ++     R+ A  LF         PN++TY ++IN  CK  ++  G
Sbjct: 72  PTVRTYTVIVHALFESGR---RMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG 128

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                 ++     P+  T+N+LI G   E  +  A  +   + +  C PN  TYN LI G
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG 188

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            CR  +   A+ L  +M            P+ VTY+++I G CK G++D A  L   M +
Sbjct: 189 FCRKKNVHRAMALLSKMLESR------LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE 242

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + PD  TY+  I  LC      EA  LF  + ++G++ + V +  ++D  CK  KMD+
Sbjct: 243 NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDD 302

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A+ LLD M+     PN+ TYN L+DG C   K+  A  L  SM   G K    +Y ILI 
Sbjct: 303 ANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIV 362

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
              K  + + A  +  +MVS G +P V  Y            ++ A  +   M   GV  
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG-RLKFAWEL 474
           D  TYT  ID     G +  A ++ + +    C+     Y+CLI  L K     K+    
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVA 482

Query: 475 FC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            C S+P+         + +M        + + A +LF  M E+  +P++ T+  LI G  
Sbjct: 483 LCDSIPNVFFADVADVWKMM--------KFETALELFEKMLEHGCSPNINTYAKLIIGLC 534

Query: 534 RINEPSKVNELLHKMKEKKVMPDASI 559
           ++       +L   M E+ V P  +I
Sbjct: 535 KVGRLGVAQKLFDHMNERGVSPSEAI 560



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 251/574 (43%), Gaps = 42/574 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  +F  M R     P + ++ +++ ++ K    +        +   GL P++ TYN L
Sbjct: 92  EAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNAL 150

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ +CK G V         +  +   PN  T+N LI G   +  +  A AL +K+     
Sbjct: 151 IDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL 210

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V+TYN+LI+G C+ G+   A  L   M     E GVV  P+  TYS  ID LCK+G 
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLM----NENGVV--PDQWTYSVFIDTLCKKGR 264

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A  LF  +K++ I  + V Y +LI G C A   ++A  L   M+ +   P+  T+N 
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LCK RK+ EA  L++ M+Q+G++    TY  L+      G  + A  +   M S G
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D   Y   I+ +C    ++EA  +   M  +G+ P  +TY  +      +  +  A 
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAF 444

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCK-----------------NGYIIE---------- 435
            +   M   G      TY+  I  L K                 N +  +          
Sbjct: 445 DVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKF 504

Query: 436 --AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A+ELF  +    C  +I  Y  LI GLCK GRL  A +LF  +    + P+   YN +
Sbjct: 505 ETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSL 564

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +   C  G    A  L   M E+   P + + ++L  G        K   +   + +   
Sbjct: 565 LNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGY 624

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             D     I++D L+KN +S        V E +G
Sbjct: 625 NDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 214/475 (45%), Gaps = 20/475 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+    K  + D+       +N  G+ P+ +TY++ I+  CK GR+    + 
Sbjct: 212 PSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVL 271

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +       N   + +LI G     ++ +A +L  ++    C PN  TYN LI+GLC+
Sbjct: 272 FNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCK 331

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL L E M     + G+ C     TY+ +I  + KEG  D A  +  QM     
Sbjct: 332 ERKVQEALLLMESMI----QKGLKC--TVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDV  Y + IH  C   +  EA+ +   M ++GV P  +T+ +++D       ++ A  
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILINGY 357
           +L  M   G  P+  TY+      CL+  + + EEL    +++  C      +   +   
Sbjct: 446 VLKRMFDTGCDPSHHTYS------CLIKHLLK-EELTKKYKNVALCDSIPNVFFADVADV 498

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K  + E AL L+ +M+  G  P + TY  L +GL ++ ++  A KLFD M   GV+   
Sbjct: 499 WKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSE 558

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y + ++  C+ G   +AV L   +        +++ N L  GL + G  + A  +F +
Sbjct: 559 AIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSN 618

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           L       + V + I+I GL  +G  D   +L   ME         T+ MLI G 
Sbjct: 619 LLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 238/465 (51%), Gaps = 7/465 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y ++IN + +   +      F  ++   F P +  FN+L+  +   S   +    F + K
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
               + +V ++  +I G C  G    + +L  E+     E G    PN V Y+T+IDG C
Sbjct: 157 -IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELR----EFGF--SPNVVIYTTLIDGCC 209

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G ++KAK LF +M    +  +  TY  LIHGL       +   ++ +M + GV P++ 
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N +M++ CK+ +  +A +L D M +RGV  N  TYNTL+ G C   K N A ++   M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S G   + ++YN LI+G+C   ++ +ALSL R++ S+G+ P++VTYN L  G  +    
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A K+  EM+  G+     TYT  ID   +   + +A++L   +  L    D+  Y+ L
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I G C  G++  A  LF  +    L PN V YN M+ G C +G   +A  LF +MEE   
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            P+V ++  +I    +  +  +   L+ KM +  + P  SI++++
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 198/376 (52%), Gaps = 12/376 (3%)

Query: 67  VSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V SF I++    +     K +D    L   G  PN+  Y  LI+  CK G +      F 
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFF 222

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + +     N  T+  LI GL       +   ++ K++  G  PN+ TYN ++N  C+ G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDG 282

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            T  A  LF+EM     E GV C  N VTY+T+I GLC+E   ++A  +  QMK + INP
Sbjct: 283 RTKDAFKLFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++TYN+LI G C      +A  L  ++  +G+ PS+VT+N+++   CK      A +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +RG++P+  TY  L+D F  M  + +A +L   ME +G   D  +Y++LI+G+C  
Sbjct: 397 KEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIK 456

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ EA  L++ MV+K ++P  V YNT+ LG  +      AL+LF EM+   +  +  +Y
Sbjct: 457 GQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516

Query: 421 TTFIDGLCKNGYIIEA 436
              I+ LCK     EA
Sbjct: 517 RYMIEVLCKERKSKEA 532



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 192/377 (50%), Gaps = 6/377 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++Y++ I+I   C+ G +   F     +    F+PN   + +LI G      I +A  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++  FG   N  TY  LI+GL + G       ++E+M     E GV   PN  TY+ ++
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ----EDGVF--PNLYTYNCVM 275

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +  CK+G    A  LF +M++  ++ ++VTYN+LI GLC     NEA ++  +M   G+ 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+++T+N ++D  C   K+ +A  L   +  RG+ P+  TYN L+ GFC  G  + A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ME  G K   ++Y ILI+ + +   +E+A+ L   M   G+ P V TY+ L  G   
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             Q+  A +LF  M    +  +   Y T + G CK G    A+ LFR +   +   ++ +
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 455 YNCLIDGLCKSGRLKFA 471
           Y  +I+ LCK  + K A
Sbjct: 516 YRYMIEVLCKERKSKEA 532



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 173/323 (53%), Gaps = 6/323 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  N +TY +LI+   K G    GF  + ++      PN  T+N ++     + R  +A
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDA 287

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF +++  G   N++TYNTLI GLCR      A  + ++M +          PN +TY
Sbjct: 288 FKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG------INPNLITY 341

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+IDG C  G + KA +L   +K   ++P +VTYN L+ G C   D + A ++  EM +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++PS +T+ +++D   +   M++A +L   M + G+ P+  TY+ L+ GFC+ G++N 
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  LF  M +   + + V YN ++ GYCK      AL L+REM  K + P V +Y  +  
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521

Query: 391 GLFEIHQVEHALKLFDEMQRDGV 413
            L +  + + A  L ++M   G+
Sbjct: 522 VLCKERKSKEAEGLVEKMIDTGI 544



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 169/320 (52%), Gaps = 14/320 (4%)

Query: 69  SFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           ++ +L+  L KN       + Y+ ++   G+FPNLYTYN ++N  CK GR    F  F  
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYE-KMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDE 293

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +     + N  T+N+LI GL  E +  EA  +  ++K+ G  PN+ITYNTLI+G C  G 
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL+L  ++ +          P+ VTY+ ++ G CK+G    A  +  +M++  I P 
Sbjct: 354 LGKALSLCRDLKSRG------LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            +TY  LI      ++  +A +L   M + G+ P V T++V++   C   +M+EASRL  
Sbjct: 408 KITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFK 467

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           LMV + + PN   YNT++ G+C  G   RA  LF  ME      +  SY  +I   CK +
Sbjct: 468 LMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527

Query: 362 EVEEALSLYREMVSKGIKPT 381
           + +EA  L  +M+  GI P+
Sbjct: 528 KSKEAEGLVEKMIDTGIDPS 547



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 187/368 (50%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  ++  +I G C+ G ++K+  L +++++   +P+VV Y +LI G C   +  +AK LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM   G+  +  T+ V++  L KN    +   + + M + GV PN  TYN +M+  C  
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+   A +LF  M   G   + V+YN LI G C+  +  EA  +  +M S GI P ++TY
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           NTL  G   + ++  AL L  +++  G++    TY   + G CK G    A ++ + +  
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              +     Y  LID   +   ++ A +L   +    L P+V TY+++I G C  GQM++
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  LF  M      P+ + ++ ++ G+ +     +   L  +M+EK++ P+ +    +++
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521

Query: 566 LLVKNEIS 573
           +L K   S
Sbjct: 522 VLCKERKS 529



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 204/421 (48%), Gaps = 13/421 (3%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY---STIIDGLCKEGFVDK 225
           Y  +IN   ++     +++ F EM +     G  C  N +T+   S+  +   +  F ++
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR--FFNE 154

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           +K          ++ DV ++  +I G C A +  ++  L +E+ + G  P+VV +  ++D
Sbjct: 155 SKI--------KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLID 206

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             CK  ++++A  L   M + G+  N  TY  L+ G    G   +  E++  M+  G   
Sbjct: 207 GCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFP 266

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +  +YN ++N +CK+   ++A  L+ EM  +G+   +VTYNTL  GL    +   A K+ 
Sbjct: 267 NLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVM 326

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D+M+ DG+  +  TY T IDG C  G + +A+ L R L+       +  YN L+ G CK 
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKK 386

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G    A ++   +    + P+ +TY I+I        M+KA  L   MEE    PDV T+
Sbjct: 387 GDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTY 446

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
            +LIHGF    + ++ + L   M  KK+ P+  I + +V    K   S ++L  F   E 
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEE 506

Query: 586 Q 586
           +
Sbjct: 507 K 507



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 175/386 (45%), Gaps = 34/386 (8%)

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I G  +  F   +  L    + E        Y  +I+    +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKG 124

Query: 273 VQPS----------------------------------VVTFNVIMDELCKNRKMDEASR 298
             P                                   V +F +++   C+  +++++  
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFD 184

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  + + G  PN   Y TL+DG C  G+I +A++LF  M   G   ++ +Y +LI+G  
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           KN   ++   +Y +M   G+ P + TYN +     +  + + A KLFDEM+  GV+ +  
Sbjct: 245 KNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIV 304

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I GLC+     EA ++   ++      ++  YN LIDG C  G+L  A  L   L
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L P++VTYNI++ G C  G    A  +  +MEE    P  IT+ +LI  F R++  
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNM 424

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVV 564
            K  +L   M+E  + PD    S+++
Sbjct: 425 EKAIQLRSPMEELGLTPDVHTYSVLI 450



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 97/223 (43%), Gaps = 18/223 (8%)

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT-RTYTTFI 424
           A SL  +++S  I+    T ++L   + E    E   +L++ M    V + +  +  ++ 
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYF 117

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           + +   G++  +                  +N L+  +  S      W  F      V +
Sbjct: 118 NEMVDKGFVPGS----------------NCFNNLLTFVVGSSSFNQWWRFFNESKIKVDL 161

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            +V ++ I+I+G C  G+++K+ DL +++ E   +P+V+ +  LI G  +  E  K  +L
Sbjct: 162 -DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDL 220

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             +M +  ++ +    ++++  L KN I  +    +   +  G
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDG 263


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 225/406 (55%), Gaps = 8/406 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PNV+++N +I  +C+ G    A+ +F EMA         C+P+  TY T++DGLCKE  +
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK------CEPDVFTYCTLMDGLCKEDRI 239

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A  L  +M+ E   P  VT+N LI+GLC   D     +L   M  +G  P+ VT+N I
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++ LC   K+D+A  LLD MV     PN  TY TL++G    G+      L  S+E  G 
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             ++ +Y+ LI+G  K ++ EEA+ L+++MV KG +P +V Y+ L  GL    +++ A +
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +  EM   G   +  TY++ I G  K G   +A+ +++ +    C  +   Y+ LI GLC
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM--EENAAAPD 521
           + G+L+ A  ++  +    L P+VV Y+ MI GLCN G ++    LF +M  +E+ + PD
Sbjct: 480 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 539

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           V+T+++L+    + N  S   +LL+ M ++   PD    +I ++ L
Sbjct: 540 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 231/461 (50%), Gaps = 51/461 (11%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL--------NATGLFPNLYT 98
           P +A  +F  M+        V SFN +L  + +   +   L          T + PN+ +
Sbjct: 131 PEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLS 190

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +N++I   CK+G V      F  +      P+  T+ +L+ GL  E RI EA  L  +++
Sbjct: 191 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQ 250

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+ +T+N LINGLC+ G  +    L + M          C PN VTY+TII+GLC
Sbjct: 251 IEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG------CVPNEVTYNTIINGLC 304

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC--------------------HANDW 258
            +G +DKA +L  +M      P+ VTY +LI+GL                     HAN++
Sbjct: 305 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 364

Query: 259 ---------------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
                           EA  L+ +M+++G QP++V ++ ++D LC+  K+DEA  +L  M
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V +G  PNA TY++L+ GF   G   +A  ++  M    C  +++ Y++LI+G C++ ++
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRTYT 421
            EA+ ++  M+ +G++P VV Y+++  GL     VE  LKLF+EM  Q      D  TY 
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 544

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
             +  LCK   I  A++L  ++    C  D+   N  ++ L
Sbjct: 545 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 38/349 (10%)

Query: 260 EAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV--QRGVRPNACTYN 316
           +A  LF  M+D+   + +V +FN +++ + +      A    +  V  +  + PN  ++N
Sbjct: 133 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFN 192

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++   C +G ++RA E+F  M    C+ D  +Y  L++G CK   ++EA+ L  EM  +
Sbjct: 193 LVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE 252

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P+ VT+N L  GL +   +    KL D M   G   +  TY T I+GLC  G + +A
Sbjct: 253 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 312

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL----------PHGVLV-- 484
           V L   +   KC  +   Y  LI+GL K GR      L  SL           +  L+  
Sbjct: 313 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 372

Query: 485 -----------------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
                                  PN+V Y+ +I GLC +G++D+A+++  +M      P+
Sbjct: 373 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPN 432

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             T+  LI GF +     K   +  +M +   +P+    S+++  L ++
Sbjct: 433 AFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 481



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 156/346 (45%), Gaps = 71/346 (20%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
           ++A  + D M+     P  V+ +  L+  L K        H  + L   G   N Y Y+ 
Sbjct: 310 DKAVSLLDRMVASKCVPNDVT-YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 368

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+   K  +       + +++     PN   +++LI GL  E ++ EA  +  ++   G
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN  TY++LI G  +TG++  A+ +++EMA  N      C PN + YS +I GLC++G
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN------CVPNEICYSVLIHGLCEDG 482

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ--GVQPSVVT 279
            + +A  ++  M    + PDVV Y+S+IHGLC+A       +LF EM+ Q    QP VVT
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 542

Query: 280 FNVIM----------------------------------------------------DEL 287
           +N+++                                                    DEL
Sbjct: 543 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDEL 602

Query: 288 C----KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
                K +++  A++++++M+Q+ + PNA T+  ++   C   K+ 
Sbjct: 603 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 3/277 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T+ +L++ +   G      ++F  M+       + ++ ++   Y K    E+A+ L+  M
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 374 VSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFD--EMQRDGVAADTRTYTTFIDGLCKN 430
           V +   + TV ++N++   + +      AL+ ++     +  ++ +  ++   I  +CK 
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G +  A+E+FR + I KCE D+  Y  L+DGLCK  R+  A  L   +      P+ VT+
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N++I GLC  G M +   L  +M      P+ +T++ +I+G     +  K   LL +M  
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            K +P+      +++ LVK   S+  +      E +G
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 234/463 (50%), Gaps = 6/463 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN + YNI+IN  C  GR S     F  ++     P   TFN++I     E  ++EA  L
Sbjct: 299 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 358

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  LK  G  PN I YNTL+NG  +      A  L+EEM            P+ +T++ +
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKG------IAPDGITFNIL 412

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + G  K G  +    L   +    + PD   ++  + GLC A   +EA    ++M+++G+
Sbjct: 413 VSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGL 472

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            PS++ FN ++    +    D+A     LMV  G+ P+  T ++L+ G  + G++  A E
Sbjct: 473 SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 532

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L G M   G   +++++ +L++ + K  +V  A SL+ EM  +GI P VV ++    GL 
Sbjct: 533 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 592

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   VE A  +F EM R G+  +   Y + I G CK G + EA++L + +R      DI 
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
             N +I GLCK GR++ A  +F  +    L P+++TYN +I G C    M  A +L   M
Sbjct: 653 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 712

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             + + PD+ T+++ IHGF      ++   +L ++    ++P+
Sbjct: 713 YASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPN 755



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 250/516 (48%), Gaps = 45/516 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G+ P+     IL     ++G     +  F  ++R    P   TF+ +I G   + 
Sbjct: 221 RMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKG 280

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I    +L   +  F CEPN   YN +IN  C  G T  AL  F  M      I   C P
Sbjct: 281 CIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM------IERGCNP 334

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             VT++T+I+  CKEG V +A+ LF  +K+   +P+ + YN+L++G     + ++A  L+
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  +G+ P  +TFN+++    K  + ++  RLL  +   G+ P+   ++  + G C  
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+++ A E    M   G     +++N +I  Y +    ++A   Y+ MV  G+ P+  T 
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 514

Query: 386 NTLFLGL-----------------------------------FEIHQVEHALKLFDEMQR 410
           ++L +GL                                   F+   V  A  L+ EM+R
Sbjct: 515 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 574

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRL 468
            G+  D   ++ FIDGL K G + EA  +F  L +L+  L  +  AYN LI G CK G+L
Sbjct: 575 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVF--LEMLRKGLIPNNFAYNSLICGFCKCGKL 632

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A +L   + H  L+P++ T N++I GLC  G+M  A ++F+DM +   +PD+IT++ L
Sbjct: 633 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 692

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           I+G+ +  +    + L+++M      PD +  +I +
Sbjct: 693 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 728



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 236/526 (44%), Gaps = 27/526 (5%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPN---EAFC----------IFDYMLRMHPSPPPVS 68
           R   S  L  F  +  R  +  V+T N    AFC          +FD +  M  SP  + 
Sbjct: 314 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 373

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            +N L+    K +  D        +   G+ P+  T+NIL++   K GR   G      I
Sbjct: 374 -YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P+ + F+  + GL    R+ EA      +   G  P++I +N++I    + G  
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A   ++ M +     G+   P+T   S+++ GL   G + +A  L  QM ++ ++ + 
Sbjct: 493 DKAFEAYKLMVH----FGLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLSVNN 546

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           + +  L+       D   A+ L+ EM  +G+ P VV F+  +D L K   ++EA  +   
Sbjct: 547 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 606

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+++G+ PN   YN+L+ GFC  GK+N A +L   M   G   D  + N++I G CK   
Sbjct: 607 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 666

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  A++++ +M   G+ P ++TYNTL  G  +   + +A  L + M   G   D  TY  
Sbjct: 667 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 726

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G C +  +  AV +   L       +   YN +++G+C S  L  A  L   L    
Sbjct: 727 RIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMILTARLLKMA 785

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            VPNVVT N+++      G  ++       + E   A D IT+ ++
Sbjct: 786 FVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 149/321 (46%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D    +SL+    +A    +A  +   M + GV+PS     ++   L +        +L 
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             +++RG +P   T++ ++ GFC  G I+  E L   M    C+ +  +YNI+IN  C  
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
               +AL+ +  M+ +G  PTVVT+NT+     +   V  A KLFD ++  G + +   Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T ++G  K   I +A  L+  +R      D   +N L+ G  K GR +    L   +  
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L+P+   ++I + GLC  G++D+A +  +DM E   +P +I F+ +I  + +     K
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 541 VNELLHKMKEKKVMPDASIVS 561
             E    M    + P  S  S
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCS 515


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 253/517 (48%), Gaps = 21/517 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVS-SFNILLASLAKN-------KHYDTRLNATGLFPNLYTY 99
           +EA  +   M R   +PPP + S+N+++A L ++       K +D  ++  G+ PN  TY
Sbjct: 175 DEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD-RGVAPNQITY 233

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N +I+   K G +  GF    ++L+    PN  T+N L+ GL    R+ E  AL  ++ +
Sbjct: 234 NTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS 293

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           +   P+  TY+ L +GL RTG +   L+LF E       IG        T S +++GLCK
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAY------TCSILLNGLCK 347

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +G V KA+ +   +    + P    YN+LI+G C   D   A  +F +M  + ++P  +T
Sbjct: 348 DGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHIT 407

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N +++ LCK   + EA  L+  M + GV P+  T+NTL+D +   G++ +   +   M+
Sbjct: 408 YNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQ 467

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G K + +S+  ++  +CKN ++ EA+++  +M+ K + P    YN++     E    E
Sbjct: 468 DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTE 527

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A  L ++M+  GV+A   TY   + GLCKN  I EA EL   L       D+ +YN +I
Sbjct: 528 QAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTII 587

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
              C  G    A EL   +    + P + TY+ ++  L + G++     L+  M      
Sbjct: 588 SACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVE 647

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           P    +        R    SKV  L  +M EK +  D
Sbjct: 648 PSSSIYG------TRCENESKVASLKKEMSEKGIAFD 678



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 243/500 (48%), Gaps = 43/500 (8%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+L + N+L+     +GR +    AFG ++ +   P+   +N  ++   A   + EA A
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 153 LFTKL-KAFGCEP-NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
           +  ++ ++ G  P +  +YN +I GL R+G    AL +F+EM +     GV   PN +TY
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR----GVA--PNQITY 233

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+IDG  K G ++    L  QM  +   P+VVTYN L+ GLC A   +E + L  EM  
Sbjct: 234 NTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS 293

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             + P   T++++ D L +         L    +++GV   A T + L++G C  GK+ +
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK 353

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE++   +   G       YN LINGYC+ ++++ A S++ +M S+ I+P  +TYN L  
Sbjct: 354 AEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALIN 413

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID------------------------- 425
           GL ++  +  A  L  EM++ GV     T+ T ID                         
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473

Query: 426 ----------GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
                       CKNG I EAV +   +       + Q YN +ID   +SG  + A+ L 
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLV 533

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    +  ++ TYN++++GLC + Q+D+A +L  ++      PDV++++ +I      
Sbjct: 534 EKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNK 593

Query: 536 NEPSKVNELLHKMKEKKVMP 555
            +  +  ELL +M +  + P
Sbjct: 594 GDTDRALELLQEMHKYDIRP 613



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 210/442 (47%), Gaps = 4/442 (0%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ ++ N L++ L +  R  +  A F  L A G  P+   +N  +      G    AL +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              M    G       P+  +Y+ +I GL + G    A  +F +M D  + P+ +TYN++
Sbjct: 181 LRRMGRSEG----APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I G     D     RL  +M+  G +P+VVT+NV++  LC+  +MDE   L+D M    +
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  TY+ L DG    G       LFG     G      + +IL+NG CK+ +V +A  
Sbjct: 297 LPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQ 356

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +   +V  G+ PT   YNTL  G  ++  ++ A  +F++M+   +  D  TY   I+GLC
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC 416

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K   I EA +L   +     +  ++ +N LID   ++G+L+  + +   +    +  NV+
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVI 476

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           ++  +++  C +G++ +A  +  DM      P+   ++ +I  +I      +   L+ KM
Sbjct: 477 SFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM 536

Query: 549 KEKKVMPDASIVSIVVDLLVKN 570
           K   V       ++++  L KN
Sbjct: 537 KSSGVSASIFTYNLLLKGLCKN 558



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 152/316 (48%), Gaps = 4/316 (1%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           PS+ + N++++ L    +  +      L+V  G RP+   +N  +      G ++ A  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 335 FGSM-ESMGCKHDDV-SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
              M  S G    D  SYN++I G  ++ +  +AL ++ EMV +G+ P  +TYNT+  G 
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +   +E   +L D+M +DG   +  TY   + GLC+ G + E   L   +       D 
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 453 QAYNCLIDGLCKSGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             Y+ L DGL ++G  +    LF  SL  GV++    T +I++ GLC DG++ KA  +  
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVII-GAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +      P    ++ LI+G+ ++ +      +  +MK + + PD    + +++ L K E
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 572 ISLKSLPSFLVQERQG 587
           +  ++    +  E+ G
Sbjct: 420 MITEAEDLVMEMEKSG 435


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 235/492 (47%), Gaps = 6/492 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  T   LI  FC  G+V+ G+    + L++   P   T+N LI G          + + 
Sbjct: 227 NTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVL 286

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             + A    P + TY  +INGLC+    + A  +F ++ +          P+ V Y+T+I
Sbjct: 287 HTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRG------YAPDRVMYTTMI 340

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLC+ G   +A+ L+ +M D+ + P+  TYN+++HG   + D+  A  L+ EM ++G  
Sbjct: 341 HGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYG 400

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            + VT N I+ ELC   K DEA  +   M + G++ +A TYN+L+ GFC  GK++    L
Sbjct: 401 TTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNL 460

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              + +   +     Y +LI   CK+ + E A  L  +M SKG+ P   TY+T+  G  +
Sbjct: 461 LNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLK 520

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
               EH  +L++E    G    T T    I  LC  G   EA E+F+ +     + D   
Sbjct: 521 SGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAIT 580

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN LI G CK G++  +  L   L    L P+  +Y  +I  LC +G  + A+ L+ DM 
Sbjct: 581 YNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMV 640

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
                P     + LI G  +    ++  + L  M E K+ P  +    + + L+++E S 
Sbjct: 641 SKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLIQSESSG 700

Query: 575 KSLPSFLVQERQ 586
              PS    +RQ
Sbjct: 701 SVGPSPSRSQRQ 712



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 215/479 (44%), Gaps = 39/479 (8%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F P++A+    +K L     I EA  ++ +LK  G   +++  N++++G  + G T +  
Sbjct: 152 FIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLF 211

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
             ++EM       G     NT T   +I   C  G V +   L  Q     ++P   TYN
Sbjct: 212 EFYQEMIKA----GTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYN 267

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI G C A ++     +   M+ +   P++ T+  I++ LCKN +  EA R+ + +  R
Sbjct: 268 KLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDR 327

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+   Y T++ G C MG    A +L+  M   G + +  +YN +++G  K+ + E A
Sbjct: 328 GYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERA 387

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             LY EM +KG   T VT N +   L    + + A ++F +M   G+ AD  TY + I G
Sbjct: 388 CELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRG 447

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            CK G + E + L   L     +  +  Y  LI   CK G  + A  L   +    L PN
Sbjct: 448 FCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPN 507

Query: 487 VVTYNIMIQG-----------------------------------LCNDGQMDKARDLFL 511
             TY+ M+ G                                   LC+ G+ D+A ++F 
Sbjct: 508 AYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFK 567

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            M E     D IT++ LI GF +  +  K   LL+++  + + P AS  + ++  L +N
Sbjct: 568 KMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQN 626



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 9/257 (3%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +++ TG+  +  TYN LI  FCK G+V         ++     P+ + +  LI     + 
Sbjct: 428 KMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDG 487

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN-GNGEIGVVCK 204
               A  L   + + G  PN  TY+T+++G  ++G       L+ E  N G G       
Sbjct: 488 DFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYG------- 540

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
             T T + II  LC  G  D+A  +F +M +  I  D +TYNSLI G C      ++  L
Sbjct: 541 TTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNL 600

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             E++ QG+QPS  ++  ++ +LC+N   + A RL   MV +G+ P+A     L+ G C 
Sbjct: 601 LNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCK 660

Query: 325 MGKINRA-EELFGSMES 340
            G+     + L G +E+
Sbjct: 661 QGRATEGMDRLMGMLEN 677



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 156/368 (42%), Gaps = 42/368 (11%)

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKM 293
           + +  PD ++ N L   L  A     AK +     D  G  P   +    +  LC    +
Sbjct: 117 NHDCTPDPISSNMLFEALLDAKAVRAAKMV----RDIAGFIPDSASLEQYVKCLCGVGFI 172

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDG-------------------------------- 321
           +EA  +   + + G+R +    N+++ G                                
Sbjct: 173 EEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVG 232

Query: 322 -----FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
                FC  G++ R  EL       G    + +YN LI G+C+ K       +   M+++
Sbjct: 233 CLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIAR 292

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
              PT+ TY  +  GL +  +   A ++F++++  G A D   YTT I GLC+ G   EA
Sbjct: 293 NHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEA 352

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            +L+  +     + +   YN ++ G  KSG  + A EL+  + +       VT N +I  
Sbjct: 353 RKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISE 412

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LC+ G+ D+A ++F  M E     D IT++ LI GF +  +  +   LL+++  +   P 
Sbjct: 413 LCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPS 472

Query: 557 ASIVSIVV 564
            S+  +++
Sbjct: 473 VSLYELLI 480


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 254/517 (49%), Gaps = 12/517 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFC 107
           + D M+ +   P   +  +++     K K  D      R+   G  P+L+ YN LIN  C
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           K G+     + F  +       N  T++ LI       ++  A     K+   G +  V 
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
            YN+LING C+ G+   A++ F+EM +         KP  V+Y+++I G C +G + +A 
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKG------LKPTVVSYTSLISGYCNKGKLHEAF 491

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L+ +M  + I P+  T+ +LI  L  AN   +A RLF EM++Q + P+ VT+NV+++  
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           CK     +A  LL+ MVQ+G+ P+  TY  L+   C  G++  A++    +     K ++
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           + Y+ L++GYCK   + +AL + REMV +G+   +V Y  L  G  +         L   
Sbjct: 612 MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKN 671

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M    +  D   YT+ IDG  K G + +A  ++  +    C  +I  Y  LI+ LCK+G 
Sbjct: 672 MHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGL 731

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           +  A  L+  +      PN VTY   +  L  +G M+KA  L  DM +   A + +++++
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLA-NTVSYNI 790

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           L+ GF ++    +  +LL +M +  + PD    S ++
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTII 827



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 242/517 (46%), Gaps = 12/517 (2%)

Query: 59  RMHPSPPPVSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRV 112
           RM  S   V  +N+L+  L KNK           L   GL  +  TY  L+   CK+   
Sbjct: 253 RMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
            +G      ++   F P  A  +SL++GL  + ++++A  L  ++K  G  P++  YN L
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           IN LC+ G    A  LF+EM    GE G+    N VTYS +ID  C+ G +D A     +
Sbjct: 373 INSLCKDGKFDEAELLFKEM----GEKGLC--ANDVTYSILIDSFCRRGKLDTAIHFLGK 426

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    I   V  YNSLI+G C   + + A   F EM+D+G++P+VV++  ++   C   K
Sbjct: 427 MIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGK 486

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + EA RL   M  +G+ PN  T+ TL+       ++  A  LF  M       ++V+YN+
Sbjct: 487 LHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNV 546

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I G+CK     +A  L  +MV KG+ P   TY  L   L    +V  A K  D++ R+ 
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +   Y+  + G CK G + +A+ + R +     ++D+  Y  LIDG  K       +
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVF 666

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L  ++    L P+ V Y  MI G    G + KA  ++  M +    P+++T+  LI+  
Sbjct: 667 GLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINEL 726

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +     K   L  +M      P+       +D L +
Sbjct: 727 CKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 247/509 (48%), Gaps = 14/509 (2%)

Query: 69  SFNILLASLAKNKH-YDTRL-----NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            F++L+ S  + K  +D+ L         L P + T   ++N   KI RV +  + FG I
Sbjct: 160 GFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEI 219

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L     P+   + ++I+         +A  +  ++++   + NV+ YN LI+GLC+    
Sbjct: 220 LSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMES--SDLNVVVYNVLIHGLCKNKRV 277

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+    E+ NG  + G+    + VTY T++ GLCK    +    +  +M +    P  
Sbjct: 278 WEAV----EIKNGLIQKGLT--ASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTE 331

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
              +SL+ GL       +A  L   +   G  PS+  +N +++ LCK+ K DEA  L   
Sbjct: 332 AALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKE 391

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M ++G+  N  TY+ L+D FC  GK++ A    G M   G K     YN LING+CK   
Sbjct: 392 MGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGN 451

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  A+S + EM+ KG+KPTVV+Y +L  G     ++  A +L+ EM   G+A +T T+TT
Sbjct: 452 LSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I  L +   + +A  LF  +       +   YN +I+G CK G    A+EL   +    
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           LVP+  TY  +I  LC+ G++ +A+    D+       + + +  L+HG+ +        
Sbjct: 572 LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDAL 631

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +  +M ++ V  D    ++++D  +K +
Sbjct: 632 GVCREMVKRGVDMDLVCYAVLIDGTIKEQ 660



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 231/508 (45%), Gaps = 50/508 (9%)

Query: 69  SFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +++IL+ S  +    DT ++        G+   +Y YN LIN  CK+G +S     F  +
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +     P   ++ SLI G   + ++ EA  L+ ++   G  PN  T+ TLI+ L R    
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  LF+EM   N        PN VTY+ +I+G CKEG   KA  L  QM  + + PD 
Sbjct: 523 TDAFRLFDEMLEQN------MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDT 576

Query: 243 VTYNSLIHGLCHANDWNEAKRLFI------------------------------------ 266
            TY  LI  LC      EAK+ FI                                    
Sbjct: 577 YTYRPLISSLCSTGRVCEAKK-FIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +GV   +V + V++D   K +       LL  M  + +RP+   Y +++DG+   G
Sbjct: 636 EMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAG 695

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            + +A  ++  M   GC  + V+Y  LIN  CK   +++A  L++EM+     P  VTY 
Sbjct: 696 SVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYC 755

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
                L     +E A++L ++M + G+ A+T +Y   + G CK G + EA +L   +   
Sbjct: 756 CFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDN 814

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D   Y+ +I   C+ G L  A E + ++ +  L P+ + YN +I G C  G++ KA
Sbjct: 815 AIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKA 874

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIR 534
            +L  DM      P+  T   L HG  R
Sbjct: 875 FELRDDMIRRGVKPNQATHKSLSHGASR 902



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 215/452 (47%), Gaps = 12/452 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILIN 104
           A   FD M+     P  VS  +++     K K ++       +   G+ PN YT+  LI+
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
              +  R++  F  F  +L     PN  T+N +I+G   E   ++A  L  ++   G  P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +  TY  LI+ LC TG    A    +++   + ++  +C      YS ++ G CKEG + 
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMC------YSALLHGYCKEGRLR 628

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A  +  +M    ++ D+V Y  LI G     D +    L   M DQ ++P  V +  ++
Sbjct: 629 DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMI 688

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D   K   + +A  + D+M+  G  PN  TY TL++  C  G +++AE L+  M      
Sbjct: 689 DGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST 748

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + V+Y   ++   +   +E+A+ L+ +M+ KG+    V+YN L  G  ++ +VE A KL
Sbjct: 749 PNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKL 807

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            DEM  + +  D  TY+T I   C+ G +  A+E + T+     + D  AYN LI G C 
Sbjct: 808 LDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCI 867

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           +G L  A+EL   +    + PN  T+  +  G
Sbjct: 868 AGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 195/384 (50%), Gaps = 14/384 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN----KHYD--TRLNATGLFPNLYTYNIL 102
           +AF +FD ML  +  P  V+ +N+++    K     K ++   ++   GL P+ YTY  L
Sbjct: 524 DAFRLFDEMLEQNMMPNEVT-YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPL 582

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C  GRV         + R  F  N   +++L+ G   E R+ +A  +  ++   G 
Sbjct: 583 ISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + +++ Y  LI+G  +   T     L + M +         +P+ V Y+++IDG  K G 
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR------LRPDKVIYTSMIDGYSKAGS 696

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V KA  ++  M DE   P++VTY +LI+ LC A   ++A+ L+ EM+     P+ VT+  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +D L +   M++A +L + M+ +G+  N  +YN L+ GFC +G++  A +L   M    
Sbjct: 757 FLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNA 815

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++Y+ +I   C+   ++ A+  +  M++KG+KP  + YN L  G     ++  A 
Sbjct: 816 IFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAF 875

Query: 403 KLFDEMQRDGVAADTRTYTTFIDG 426
           +L D+M R GV  +  T+ +   G
Sbjct: 876 ELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 178/393 (45%), Gaps = 33/393 (8%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +++ +  +I    +E  +  +  +F  M+   + P V T   +++GL      +    LF
Sbjct: 157 SSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLF 216

Query: 266 IEMMDQGVQP---------------------------------SVVTFNVIMDELCKNRK 292
            E++  G++P                                 +VV +NV++  LCKN++
Sbjct: 217 GEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKR 276

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + EA  + + ++Q+G+  +  TY TL+ G C + +      +   M  +G    + + + 
Sbjct: 277 VWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSS 336

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           L+ G  +  +V +A  L   +   G  P++  YN L   L +  + + A  LF EM   G
Sbjct: 337 LVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           + A+  TY+  ID  C+ G +  A+     + +   ++ +  YN LI+G CK G L  A 
Sbjct: 397 LCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAV 456

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             F  +    L P VV+Y  +I G CN G++ +A  L+ +M     AP+  TF  LI   
Sbjct: 457 SFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISAL 516

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            R N  +    L  +M E+ +MP+    +++++
Sbjct: 517 FRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIE 549



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 51/371 (13%)

Query: 236 ENINPDVVTYNSLIHGLCHAN-DWNEAKRLFIEMMDQGVQP-----------------SV 277
           +N N   +++  LIH L +AN  W  +  L   ++  G+ P                 S 
Sbjct: 99  KNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISS 158

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           + F++++    + ++M ++  +  LM Q  + P   T   +++G   + +++    LFG 
Sbjct: 159 LGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGE 218

Query: 338 MESMGCKHD---------------------------------DVSYNILINGYCKNKEVE 364
           + SMG + D                                  V YN+LI+G CKNK V 
Sbjct: 219 ILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVW 278

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EA+ +   ++ KG+  + VTY TL LGL ++ + E    + DEM   G        ++ +
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +GL + G +++A +L   ++ +     +  YN LI+ LCK G+   A  LF  +    L 
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N VTY+I+I   C  G++D A      M        V  ++ LI+G  ++   S     
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 545 LHKMKEKKVMP 555
             +M +K + P
Sbjct: 459 FDEMIDKGLKP 469


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 167/536 (31%), Positives = 254/536 (47%), Gaps = 22/536 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNAT 90
           R GD++      A  + D M R +   P   +F   +  L + +        +D      
Sbjct: 65  RAGDLDA-----AMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETC 119

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--SCFTPNAATFNSLIKGLHAESRIM 148
              P++  YN LI  +CK G        F R+ +  SC  PNA +F++L+  L   SR  
Sbjct: 120 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSC-KPNAVSFDTLVIFLCKMSRAT 178

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A A+F ++   G + +V   NTLI+  CR G    A  L   M          C  +  
Sbjct: 179 DALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMT------AHACARDAF 232

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY  +++  C+ G + +  +     + +      V YN +I G        EA +LF   
Sbjct: 233 TYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFEST 292

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           M +   P V T+N+++  LCK+++++EA  L     Q GV  +  TY+ LMD F   G+ 
Sbjct: 293 MTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRA 351

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A E+F +M+  GC  D V YN+LI+   K  +V+EAL L  +M  KGI P   TYN +
Sbjct: 352 AKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 411

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L    + E A   F  M+R   + D  TY T ++GL K     EA +LF  ++  KC
Sbjct: 412 IDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKC 471

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D+  +  LID L K+GR++ A E    L      PN   YN +I G C  GQ+DK  +
Sbjct: 472 MPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYE 531

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           LF DM E +  PD IT+ +L+ GF R    S   ELL +M  +   P  +  ++++
Sbjct: 532 LFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLI 587



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 238/496 (47%), Gaps = 12/496 (2%)

Query: 76  SLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFN 135
           +LA  KH    L   GL  + +T   ++   CK+GR  L       + +     +  T  
Sbjct: 2   ALATYKH----LLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCT 57

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
             I+       +  A  +   ++    C+P+ + +   ++ LC       A+ LF++M  
Sbjct: 58  ECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRE 117

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLIHGLC 253
                   C P+ V Y+T+I G CK G  D+A  +F ++K E +  P+ V++++L+  LC
Sbjct: 118 T-----CDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLC 172

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             +   +A  +F EM+  G++  V   N ++   C+   + +A RLL  M       +A 
Sbjct: 173 KMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAF 232

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY  L++  C  G+++            GC    V+YN +I G+ +   + EA  L+   
Sbjct: 233 TYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFEST 292

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           ++K   P V TYN L + L +  Q+E AL LF E ++ GV  D  TY+  +D   K G  
Sbjct: 293 MTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRA 351

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A+E+F  ++   C  D   YN LI  L K G++  A EL   +    ++P+  TYNI+
Sbjct: 352 AKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 411

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  L + G+ +KA   F  M+    +PDV+T++ L++G  ++    +  +L  +M+  K 
Sbjct: 412 IDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKC 471

Query: 554 MPDASIVSIVVDLLVK 569
           MPD +    ++D L K
Sbjct: 472 MPDLTTFGTLIDTLAK 487



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 226/522 (43%), Gaps = 49/522 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG-LFPNLYTYNI 101
           +A  +FD M       P V ++N L+A   K    D       RL   G   PN  +++ 
Sbjct: 107 QAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDT 166

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+   CK+ R +     F  +L +    +    N+LI        + +A  L   + A  
Sbjct: 167 LVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHA 226

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  +  TY  L+N  CR G  M  +  F E+A  +G     C  + V Y+ II G  + G
Sbjct: 227 CARDAFTYGILVNAHCRAGQ-MHEVASFMELARHDG-----CALSAVNYNFIIQGFIRCG 280

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE-------------- 267
            + +A  LF     +   PDV TYN LI  LC +    EA  LF E              
Sbjct: 281 RLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYS 339

Query: 268 ---------------------MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
                                M   G  P  V +NV++  L K  K+DEA  LL+ M ++
Sbjct: 340 YLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 399

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P+  TYN ++D     G+  +A   FG M+      D V+YN L+NG  K +  +EA
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 459

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L+ EM +    P + T+ TL   L +  ++E AL+    + + G A ++  Y   I G
Sbjct: 460 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISG 519

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            C++G + +  ELF+ +    C  D   Y  L+ G  + G    A EL   +      P 
Sbjct: 520 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 579

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           + TYN++I+ L   GQ++ A  LF +M      PD+ T+  L
Sbjct: 580 LATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 130/277 (46%), Gaps = 6/277 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G  P+   YN+LI+C  K G+V         + R    P+  T+N +I  L +  R
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A + F  +K     P+V+TYNTL+NGL +   T  A +LF+EM          C P+
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK------CMPD 474

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             T+ T+ID L K G ++ A     ++      P+   YN+LI G C +   ++   LF 
Sbjct: 475 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ 534

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M++    P  +T+ +++    +      A  LL  MV+ G  P   TYN L+    + G
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           ++  A  LF  M + G   D  +Y+ L N    NK V
Sbjct: 595 QVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKSV 631



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 4/328 (1%)

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           +  ++  G+     T   ++ E+CK  + +  + LL  + Q+GV  +  T    +  F  
Sbjct: 6   YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65

Query: 325 MGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTV 382
            G ++ A  +   M     C+ D V++   ++  C+ + VE+A++L+ +M       P V
Sbjct: 66  AGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDV 125

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V YNTL  G  +    + AL +F  ++++G    +  ++ T +  LCK     +A+ +F+
Sbjct: 126 VAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQ 185

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     + D+   N LI   C+ G L+ A  L   +       +  TY I++   C  G
Sbjct: 186 EMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAG 245

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           QM +          +  A   + ++ +I GFIR    ++  +L      K+ +PD    +
Sbjct: 246 QMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN 305

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQGEV 589
           +++ L    ++  ++L  F   E+ G V
Sbjct: 306 LLIALCKSKQLE-EALTLFQEAEQGGVV 332


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 251/534 (47%), Gaps = 34/534 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P  ++ NILL SL +   +     A      G+ P++Y +   IN FCK G+V      F
Sbjct: 216 PSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELF 275

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            ++  +   PN  T+N++I GL    R  EA     K+   G EP +ITY+ L+ GL + 
Sbjct: 276 SKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKA 335

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTV-----------------------------TY 210
                A  + +EM        V+   N +                             TY
Sbjct: 336 KRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTY 395

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I G CK G  D A+ L  +M     N +  ++ S+I  LC  + ++ A R   EM+ 
Sbjct: 396 NTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLL 455

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P       ++  LCK+ K  +A  L    + +G   +  T N L+ G C  GK+  
Sbjct: 456 RNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEE 515

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
              +   +   G   D VSYN LI+G C NK+++EA     EMV KG+KP   TY+ L  
Sbjct: 516 GFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIR 575

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL  +++VE A++ + + +R+G+  D  TY+  IDG CK     E  +LF  +     + 
Sbjct: 576 GLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQP 635

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   YN LI   C+SGRL  A EL   + H  + PN  TY  +I+G+    ++++A+ L 
Sbjct: 636 NTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLL 695

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            +M      P+V  +  LI G+ ++ +  KV  LL +M  K V P+    ++++
Sbjct: 696 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 749



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 242/505 (47%), Gaps = 35/505 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++  L  +  YD       ++   G+ P L TY+IL+    K  R+   +  
Sbjct: 285 PNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCV 344

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +    F PN   +N+LI  L     + +A  +   + + G      TYNTLI G C+
Sbjct: 345 LKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 404

Query: 179 TGHTMIALNLFEEM------ANGNGEIGVVC-----------------------KPNTVT 209
           +G   IA  L +EM       N      V+C                        P    
Sbjct: 405 SGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGL 464

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            +T+I GLCK G   KA  L+L+  ++    D  T N+L+HGLC A    E  R+  E++
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL 524

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G     V++N ++   C N+K+DEA   +D MV++G++P+  TY+ L+ G   M K+ 
Sbjct: 525 GRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVE 584

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A + +G  +  G   D  +Y+++I+G CK +  EE   L+ EM+S  ++P  V YN L 
Sbjct: 585 EAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLI 644

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                  ++  AL+L ++M+  G++ ++ TYT+ I G+     + EA  L   +R+   E
Sbjct: 645 GAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLE 704

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y  LIDG  K G++     L   +    + PN +TY +MI G   DG + +A  L
Sbjct: 705 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 764

Query: 510 FLDMEENAAAPDVITFDMLIHGFIR 534
             +M E    PD IT+   I+G+++
Sbjct: 765 LHEMREKGIVPDSITYKEFIYGYLK 789



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 216/425 (50%), Gaps = 13/425 (3%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PN 206
           A  +F  L   G  P+  T N L+  L R          F           VVCK   P+
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFH----------VVCKGVSPD 251

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
              ++T I+  CK G V++A  LF +M++  + P+VVTYN++I GL  +  ++EA     
Sbjct: 252 VYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKE 311

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+++GV+P+++T+++++  L K +++ +A  +L  M ++G  PN   YN L+D     G
Sbjct: 312 KMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAG 371

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +N+A E+   M S G      +YN LI GYCK+ + + A  L +EM+S G      ++ 
Sbjct: 372 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFT 431

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           ++   L   H  + AL+   EM    ++      TT I GLCK+G   +AVEL+      
Sbjct: 432 SVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNK 491

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              +D +  N L+ GLC++G+L+  + +   +     V + V+YN +I G C + ++D+A
Sbjct: 492 GFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEA 551

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
                +M +    PD  T+ +LI G + +N+  +  +     K   ++PD    S+++D 
Sbjct: 552 FMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDG 611

Query: 567 LVKNE 571
             K E
Sbjct: 612 CCKAE 616


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 213/400 (53%), Gaps = 7/400 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+  +Y +++  +CKIG +         +L   F  + ATF  +I     +     A
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
              F +L   G EPN+I +  +I GLC+ G    A  + EEM      +G   KPN  T+
Sbjct: 260 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEM------VGKGWKPNVYTH 313

Query: 211 STIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +++IDGLCK+G+ +KA  LFL++ + EN  P+V+TY ++I G C  +  N A+ L   M 
Sbjct: 314 TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +QG+ P+  T+  ++D  CK    + A  L++LM   G  PN CTYN +++G C  G++ 
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A ++       G K D  +YNIL++ +CK + + +AL+L+ +M+  GI+P + +Y TL 
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 493

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                 ++++ +   F+E  R G+    +TYT+ I G C+ G +  A++ F  L    C 
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            D   Y  +I GLCK  +   A  L+ S+    LVP  VT
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVT 593



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 215/449 (47%), Gaps = 7/449 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++  GL PN  T N +I    ++G V    + F  +      P++ ++  ++        
Sbjct: 161 MHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGN 220

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I+EA    + +   G   +  T+  +I+     G+T  AL  F  + +   E      PN
Sbjct: 221 ILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLE------PN 274

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            + ++ +I+GLCK G + +A  +  +M  +   P+V T+ SLI GLC      +A RLF+
Sbjct: 275 LINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFL 334

Query: 267 EMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +++  +  +P+V+T+  ++   C+  K++ A  LL  M ++G+ PN  TY TL+DG C  
Sbjct: 335 KLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKA 394

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G   RA +L   M S G   +  +YN ++NG CK   V+EA  +  +    G+KP   TY
Sbjct: 395 GNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTY 454

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L     +   +  AL LF++M + G+  D  +YTT I   C+   + E+   F     
Sbjct: 455 NILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 514

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +      + Y  +I G C+ G L  A + F  L      P+ +TY  +I GLC   + D+
Sbjct: 515 IGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDE 574

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           AR L+  M E    P  +T   L + + +
Sbjct: 575 ARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 217/455 (47%), Gaps = 7/455 (1%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++  F ++GR+         +      PN  T N +IK       +  A  LF ++   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+ I+Y  ++   C+ G+ + A      M     E G V   +  T++ II     +G
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVML----ERGFVV--DNATFTLIISRFSGKG 254

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
           +  +A   F ++ D  + P+++ +  +I GLC      +A  +  EM+ +G +P+V T  
Sbjct: 255 YTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314

Query: 282 VIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            ++D LCK    ++A RL L L+     +PN  TY  ++ G+C   K+NRAE L   M+ 
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   +  +Y  LI+G+CK    E A  L   M S+G  P + TYN +  GL +  +V+ 
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A K+ ++  ++G+  D  TY   +   CK   I +A+ LF  +  +  + DI +Y  LI 
Sbjct: 435 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
             C+  R+K +   F       ++P   TY  MI G C +G +  A   F  + ++  AP
Sbjct: 495 VFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAP 554

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           D IT+  +I G  + ++  +   L   M EK ++P
Sbjct: 555 DSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 173/348 (49%), Gaps = 7/348 (2%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           Y  RL   GL PNL  +  +I   CK G +   F     ++   + PN  T  SLI GL 
Sbjct: 262 YFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLC 321

Query: 143 AESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
            +    +A  LF KL ++   +PNV+TY  +I+G CR       LN  E + +   E G+
Sbjct: 322 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRED----KLNRAEMLLSRMKEQGL 377

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           V  PNT TY+T+IDG CK G  ++A  L   M  E  +P++ TYN++++GLC      EA
Sbjct: 378 V--PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEA 435

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            ++  +    G++P   T+N++M E CK   + +A  L + M++ G++P+  +Y TL+  
Sbjct: 436 YKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAV 495

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           FC   ++  +E  F     +G    + +Y  +I GYC+   +  A+  +  +   G  P 
Sbjct: 496 FCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPD 555

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
            +TY  +  GL +  + + A  L+D M   G+     T  T     CK
Sbjct: 556 SITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 196/435 (45%), Gaps = 7/435 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           +++      R+ EA  +  ++   G  PN  T N +I      G    A  LFEEM    
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR- 199

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
              GV  +P++++Y  ++   CK G + +A      M +     D  T+  +I       
Sbjct: 200 ---GV--QPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKG 254

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
               A   F  ++D G++P+++ F  +++ LCK   + +A  +L+ MV +G +PN  T+ 
Sbjct: 255 YTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314

Query: 317 TLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           +L+DG C  G   +A  LF  +  S   K + ++Y  +I+GYC+  ++  A  L   M  
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G+ P   TY TL  G  +    E A  L + M  +G + +  TY   ++GLCK G + E
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A ++         + D   YN L+   CK   ++ A  LF  +    + P++ +Y  +I 
Sbjct: 435 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             C + +M ++   F +       P   T+  +I G+ R    +   +  H++ +    P
Sbjct: 495 VFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAP 554

Query: 556 DASIVSIVVDLLVKN 570
           D+     ++  L K 
Sbjct: 555 DSITYGAIISGLCKQ 569



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 162/325 (49%), Gaps = 5/325 (1%)

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
            EA  + IEM +QG+ P+  T N I+    +   ++ A  L + M  RGV+P++ +Y  +
Sbjct: 152 KEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVM 211

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  +C +G I  A++    M   G   D+ ++ ++I+ +        AL  +R +V  G+
Sbjct: 212 VVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGL 271

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +P ++ +  +  GL +   ++ A ++ +EM   G   +  T+T+ IDGLCK G+  +A  
Sbjct: 272 EPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFR 331

Query: 439 LFRTLRILKCE---LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           LF  L++++ E    ++  Y  +I G C+  +L  A  L   +    LVPN  TY  +I 
Sbjct: 332 LF--LKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLID 389

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C  G  ++A DL   M     +P++ T++ +++G  +     +  ++L    +  + P
Sbjct: 390 GHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKP 449

Query: 556 DASIVSIVVDLLVKNEISLKSLPSF 580
           D    +I++    K E   ++L  F
Sbjct: 450 DKFTYNILMSEHCKQENIRQALALF 474



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 62/128 (48%)

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           +   C+++   + GRLK A E+   + +  LVPN  T N +I+     G ++ A  LF +
Sbjct: 136 EVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEE 195

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M      PD I++ +++  + +I    + ++ L  M E+  + D +  ++++        
Sbjct: 196 MCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGY 255

Query: 573 SLKSLPSF 580
           + ++L  F
Sbjct: 256 TTRALWYF 263


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 174/597 (29%), Positives = 276/597 (46%), Gaps = 67/597 (11%)

Query: 19  SAFRSNFSSLLVHFRDLTTREGDINVITPNE------------AFC-IFDYMLRMHPSPP 65
           S+ R +    +  F  L++R    +V T N             A C +FD M       P
Sbjct: 168 SSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTP 227

Query: 66  PVSSFNILLASLAKNKHYD------TRLNATGL--FPNLYTYNILINCFCKIGRVSLGFI 117
              S+  ++ +L K    D      + L   GL        YN+L++  CK GRV     
Sbjct: 228 NGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIR 287

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             GR+  S   P+  TF  LI GL    R  E  AL  +++  G  PN +  N LI+  C
Sbjct: 288 LKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHC 347

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           R GH   A+ LF+EM +         K   VTY+ I   LCKEG +++A+ +  +M    
Sbjct: 348 RKGHFTEAIRLFDEMVSKE------MKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401

Query: 238 INPDVVTYNSLIHGLCHANDWNEAK-RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           +      +NS++ GL       E+  RL  EM+ +G++P+         +LC+ R+  EA
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             +   M+++G+  N  T N L+ G C    +  A E+  +M + G + D+++YNI+I G
Sbjct: 462 VGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQG 521

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK+ ++EEAL L  +M+ KG KP    +N++     ++ ++E AL L  +M+ +GV  D
Sbjct: 522 CCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPD 581

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA--YNCLIDGLCKSGRLKFAWEL 474
             +Y T IDG CK   I +A E    L  + C L   A  YN LI G  ++G +  A  +
Sbjct: 582 VVSYGTIIDGYCKAKDIQKANEYLNEL--MACGLKPNAVIYNALIGGYGRNGNISGAIGV 639

Query: 475 ---------------FCSLPHGV--------------------LVPNVVTYNIMIQGLCN 499
                          +CSL H +                    +   VV Y IMIQGLC 
Sbjct: 640 LDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCK 699

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            G+MD+A + F +M   +  P+ IT+  L++ + +     + ++L  +M    ++PD
Sbjct: 700 IGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPD 756



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 220/459 (47%), Gaps = 10/459 (2%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE---PNV 166
           G + L   AF  +     +P+  T N+L++ L     +     +F +++   C+   PN 
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMR--DCKTVTPNG 229

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            +Y ++I  LC+ G       +  ++ +     G+      V Y+ ++D LCK G VD+A
Sbjct: 230 YSYTSMIKALCKVGKVDDGFKILSDLIHA----GLQQSAGAVPYNLLMDALCKSGRVDEA 285

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L  +M++  + P +VT+  LI+GL  ++ + E   L  EM   G+ P+ V  N ++D 
Sbjct: 286 IRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDW 345

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            C+     EA RL D MV + ++  A TYN +    C  G++ RAE +   M S G    
Sbjct: 346 HCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIH 405

Query: 347 DVSYNILINGYC-KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
              +N ++ G   +   +E  + L  EMV +G+KP           L +  + + A+ ++
Sbjct: 406 SGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIW 465

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            +M   G+  +  T    I GLC+   +  A E+ RT+     ELD   YN +I G CK 
Sbjct: 466 LKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKD 525

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            +++ A +L   +      P+   +N +I   C+ G+M++A  L   M+     PDV+++
Sbjct: 526 SKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSY 585

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
             +I G+ +  +  K NE L+++    + P+A I + ++
Sbjct: 586 GTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALI 624



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 206/424 (48%), Gaps = 18/424 (4%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PN 206
           A   F  L +    P+V T N L+  L RTG+      +F+EM +        CK   PN
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRD--------CKTVTPN 228

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENI--NPDVVTYNSLIHGLCHANDWNEAKRL 264
             +Y+++I  LCK G VD    +   +    +  +   V YN L+  LC +   +EA RL
Sbjct: 229 GYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRL 288

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M +  V PS+VTF ++++ L ++ +  E   LL  M   G+ PN    N L+D  C 
Sbjct: 289 KGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCR 348

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G    A  LF  M S   K   V+YN++    CK  E+E A  +  EM+S G+      
Sbjct: 349 KGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGL 408

Query: 385 YNTLFLGLFE-IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +N++  GL +   ++E  ++L  EM + G+  +    T     LC+     EAV ++  L
Sbjct: 409 FNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIW--L 466

Query: 444 RILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           ++L+  L  +I   N LI GLC+   +K A E+  ++ +  +  + +TYNIMIQG C D 
Sbjct: 467 KMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDS 526

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++++A  L  DM      PD   F+ +IH +  + +  +   LL +MK + V PD     
Sbjct: 527 KIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYG 586

Query: 562 IVVD 565
            ++D
Sbjct: 587 TIID 590



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 142/279 (50%), Gaps = 8/279 (2%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TYNI+I   CK  ++         ++R  F P+A  FNS+I       ++ EA  L  ++
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDG 216
           K  G +P+V++Y T+I+G C+      A     E MA G        KPN V Y+ +I G
Sbjct: 574 KIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACG-------LKPNAVIYNALIGG 626

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
             + G +  A  +   M+   I P  VTY SL+H +CHA   +EAK +F +     ++  
Sbjct: 627 YGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVG 686

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VV + +++  LCK  KMDEA    + M  R + PN  TY TLM  +C  G    A +LF 
Sbjct: 687 VVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFD 746

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
            M S G   D+VSYN L+ G+ +   +++A+    E+ S
Sbjct: 747 EMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISS 785



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 151/293 (51%), Gaps = 13/293 (4%)

Query: 69  SFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++NI++    K+   +  L         G  P+ Y +N +I+ +C +G++       G++
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P+  ++ ++I G      I +A     +L A G +PN + YN LI G  R G+ 
Sbjct: 574 KIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNI 633

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+ + + M +    IG+  +P  VTY +++  +C  G VD+AK +F Q +  +I   V
Sbjct: 634 SGAIGVLDTMES----IGI--QPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGV 687

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V Y  +I GLC     +EA   F EM  + + P+ +T+  +M   CK+   +EAS+L D 
Sbjct: 688 VGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDE 747

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           MV  G+ P+  +YNTL+ GF  +  +++A E    + S+  ++D +  N+L+N
Sbjct: 748 MVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDCLD-NVLVN 799


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 220/429 (51%), Gaps = 12/429 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKA------FGCEPNVITYNTLINGLCRTGHT 182
           P+  TF  L+  L    RI EA  +F +L+        G EP+V+ +NTLI+GLC+ G  
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
              L+L EEM  GN     + +PNTVTY+ +IDG  K G  D+A  LF QM +E + P+V
Sbjct: 374 EDGLSLLEEMKMGN-----INRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNV 428

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           +T N+L+ GLC     + A   F EM  +G++ +  T+  ++   C    ++ A +  + 
Sbjct: 429 ITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEE 488

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+  G  P+A  Y +L+ G C+ G++N A  +   ++  G   D   YN+LI+G+CK K+
Sbjct: 489 MLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKK 548

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +E    L  EM   G+KP  +TYNTL   L +      A K+ ++M ++G+     TY  
Sbjct: 549 LERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGA 608

Query: 423 FIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            I   C    + E +++F  +    K   +   YN LID LC++  +  A  L   +   
Sbjct: 609 IIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            + PN  TYN +++G+ +   + KA +L   M E A  PD IT ++L      + E  K+
Sbjct: 669 RVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKL 728

Query: 542 NELLHKMKE 550
              +   ++
Sbjct: 729 KHFVEGYQD 737



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 202/430 (46%), Gaps = 14/430 (3%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           E   L  KL   G  P+      L+  LC      +A  +   +    G +      +  
Sbjct: 229 EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAV------DAA 282

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           + + ++  L +   + +   L  +M+   I P VVT+  L++ LC A   +EA ++F  +
Sbjct: 283 SCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRL 342

Query: 269 MDQG------VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV-RPNACTYNTLMDG 321
             +G      V+P VV FN ++D LCK  K ++   LL+ M    + RPN  TYN L+DG
Sbjct: 343 RGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDG 402

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F   G  +RA ELF  M   G + + ++ N L++G CK+  V  A+  + EM  KG+K  
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TY  L      ++ +  A++ F+EM   G + D   Y + I GLC  G + +A  +  
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            L++    LD   YN LI G CK  +L+  +EL   +    + P+ +TYN +I  L   G
Sbjct: 523 KLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM-KEKKVMPDASIV 560
               A  +   M +    P V+T+  +IH +       +  ++  +M    KV P+  I 
Sbjct: 583 DFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIY 642

Query: 561 SIVVDLLVKN 570
           +I++D L +N
Sbjct: 643 NILIDALCRN 652



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 13/362 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+    K  ++D       ++N  G+ PN+ T N L++  CK GRV      
Sbjct: 391 PNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +       NAAT+ +LI      + I  A   F ++ + GC P+ + Y +LI+GLC 
Sbjct: 451 FNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCI 510

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +  ++      +   C      Y+ +I G CK+  +++   L  +M++  +
Sbjct: 511 AGRMNDASVVVSKLKLAGFSLDRSC------YNVLISGFCKKKKLERVYELLTEMEETGV 564

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD +TYN+LI  L    D+  A ++  +M+ +G++PSVVT+  I+   C  + +DE  +
Sbjct: 565 KPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMK 624

Query: 299 LLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +   M     V PN   YN L+D  C    ++RA  L   M+    + +  +YN ++ G 
Sbjct: 625 IFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGV 684

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
              K + +A  L   MV +  +P  +T   L   L  + ++E      +  Q     A +
Sbjct: 685 RDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSSYPASS 744

Query: 418 RT 419
           +T
Sbjct: 745 QT 746


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 225/406 (55%), Gaps = 8/406 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PNV+++N +I  +C+ G    A+ +F EMA         C+P+  TY T++DGLCKE  +
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK------CEPDVFTYCTLMDGLCKEDRI 223

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A  L  +M+ E   P  VT+N LI+GLC   D     +L   M  +G  P+ VT+N I
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++ LC   K+D+A  LLD MV     PN  TY TL++G    G+      L  S+E  G 
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             ++ +Y+ LI+G  K ++ EEA+ L+++MV KG +P +V Y+ L  GL    +++ A +
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +  EM   G   +  TY++ I G  K G   +A+ +++ +    C  +   Y+ LI GLC
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM--EENAAAPD 521
           + G+L+ A  ++  +    L P+VV Y+ MI GLCN G ++    LF +M  +E+ + PD
Sbjct: 464 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 523

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           V+T+++L+    + N  S   +LL+ M ++   PD    +I ++ L
Sbjct: 524 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 231/461 (50%), Gaps = 51/461 (11%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL--------NATGLFPNLYT 98
           P +A  +F  M+        V SFN +L  + +   +   L          T + PN+ +
Sbjct: 115 PEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLS 174

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +N++I   CK+G V      F  +      P+  T+ +L+ GL  E RI EA  L  +++
Sbjct: 175 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQ 234

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             GC P+ +T+N LINGLC+ G  +    L + M          C PN VTY+TII+GLC
Sbjct: 235 IEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG------CVPNEVTYNTIINGLC 288

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC--------------------HANDW 258
            +G +DKA +L  +M      P+ VTY +LI+GL                     HAN++
Sbjct: 289 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 348

Query: 259 ---------------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
                           EA  L+ +M+++G QP++V ++ ++D LC+  K+DEA  +L  M
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V +G  PNA TY++L+ GF   G   +A  ++  M    C  +++ Y++LI+G C++ ++
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRTYT 421
            EA+ ++  M+ +G++P VV Y+++  GL     VE  LKLF+EM  Q      D  TY 
Sbjct: 469 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 528

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
             +  LCK   I  A++L  ++    C  D+   N  ++ L
Sbjct: 529 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 38/349 (10%)

Query: 260 EAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV--QRGVRPNACTYN 316
           +A  LF  M+D+   + +V +FN +++ + +      A    +  V  +  + PN  ++N
Sbjct: 117 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFN 176

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++   C +G ++RA E+F  M    C+ D  +Y  L++G CK   ++EA+ L  EM  +
Sbjct: 177 LVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE 236

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P+ VT+N L  GL +   +    KL D M   G   +  TY T I+GLC  G + +A
Sbjct: 237 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKA 296

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL----------PHGVLV-- 484
           V L   +   KC  +   Y  LI+GL K GR      L  SL           +  L+  
Sbjct: 297 VSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISG 356

Query: 485 -----------------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
                                  PN+V Y+ +I GLC +G++D+A+++  +M      P+
Sbjct: 357 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPN 416

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             T+  LI GF +     K   +  +M +   +P+    S+++  L ++
Sbjct: 417 AFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 156/346 (45%), Gaps = 71/346 (20%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
           ++A  + D M+     P  V+ +  L+  L K        H  + L   G   N Y Y+ 
Sbjct: 294 DKAVSLLDRMVASKCVPNDVT-YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+   K  +       + +++     PN   +++LI GL  E ++ EA  +  ++   G
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C PN  TY++LI G  +TG++  A+ +++EMA  N      C PN + YS +I GLC++G
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN------CVPNEICYSVLIHGLCEDG 466

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ--GVQPSVVT 279
            + +A  ++  M    + PDVV Y+S+IHGLC+A       +LF EM+ Q    QP VVT
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVT 526

Query: 280 FNVIM----------------------------------------------------DEL 287
           +N+++                                                    DEL
Sbjct: 527 YNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDEL 586

Query: 288 C----KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
                K +++  A++++++M+Q+ + PNA T+  ++   C   K+ 
Sbjct: 587 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 3/277 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T+ +L++ +   G      ++F  M+       + ++ ++   Y K    E+A+ L+  M
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 374 VSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFD--EMQRDGVAADTRTYTTFIDGLCKN 430
           V +   + TV ++N++   + +      AL+ ++     +  ++ +  ++   I  +CK 
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G +  A+E+FR + I KCE D+  Y  L+DGLCK  R+  A  L   +      P+ VT+
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N++I GLC  G M +   L  +M      P+ +T++ +I+G     +  K   LL +M  
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            K +P+      +++ LVK   S+  +      E +G
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 257/499 (51%), Gaps = 11/499 (2%)

Query: 93  FP-NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           FP ++ T NI++N  C  G++S       + +++C  PNA T+N+++     + R   A 
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRCKSAL 284

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +   ++  G E ++ TYN +I+ LC+   +  A  L + M   N        P+  +Y+
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN------LTPDECSYN 338

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I G   EG ++ A  +F QM  +++ P V TY +LI G C     +EA+R+  EM   
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           GV+PS +T++ +++  CK+ K+  A  L+  +  R +  N   Y  L+DGFC +G++++A
Sbjct: 399 GVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKA 458

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +++   M + G   D ++Y+ LING CK   + E   +   M   G+ P  V Y TL   
Sbjct: 459 KQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFY 518

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +    + ALK F ++ R G+ A++  +   +    + G I EA +  + +  +K   D
Sbjct: 519 FCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFD 578

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + ++NC+ID  C+ G +  A+ ++ ++      P++ TY  +++GLC  G + +A++  +
Sbjct: 579 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 638

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            + E A A D  T + L+ G  +     +  +L  KM  + ++PD    +I++D   K  
Sbjct: 639 YLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG 698

Query: 572 ISLKSLPSFLVQERQGEVG 590
              K +P+ ++ +   E G
Sbjct: 699 ---KVVPALILLQMMLEKG 714



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 254/509 (49%), Gaps = 13/509 (2%)

Query: 69  SFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           ++NI++  L K K          R+    L P+  +YN LI+ F   G+++L    F ++
Sbjct: 301 TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           LR    P+ AT+ +LI G     R  EA  +  +++  G  P+ +TY+ L+NG C+    
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKL 420

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL+L + + + +  I      N   Y+ +IDG C+ G V KAK +   M  + I+PDV
Sbjct: 421 GPALDLIKYLRSRSISI------NRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDV 474

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           +TY++LI+G+C     +E K +   M   GV P+ V +  ++   CK     EA +    
Sbjct: 475 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           + + G+  N+  +N L+  F   G I  AE+    M  M    D  S+N +I+ YC+   
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 594

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V EA S+Y  MV  G  P + TY +L  GL +   +  A +    +     A D +T  T
Sbjct: 595 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 654

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + G+CK+G + EA++L   +       D   Y  L+DG CK G++  A  L   +    
Sbjct: 655 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKG 714

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAPDVITFDMLIHGFIRINEPSKV 541
           LVP+ + Y  ++ GL N+GQ+  A  +F ++  +     D I ++ +++G+++  + +++
Sbjct: 715 LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 774

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             L+  M E +V P ++  +I++   +K 
Sbjct: 775 ERLMRNMHENEVYPSSASYNILMHGYIKK 803



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 254/552 (46%), Gaps = 64/552 (11%)

Query: 65   PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V +++ L+  + K       K   +R+  +G+ PN   Y  L+  FCK G        
Sbjct: 472  PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 531

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  I RS    N+   N+L+   + E  I EA      +       +V ++N +I+  C+
Sbjct: 532  FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 591

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G+ + A ++++ M            P+  TY +++ GLC+ G + +AK   + + ++  
Sbjct: 592  RGNVLEAFSVYDNMVRHGWP------PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKAC 645

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              D  T N+L+ G+C     +EA  L  +M+ + + P   T+ +++D  CK  K+  A  
Sbjct: 646  AIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALI 705

Query: 299  LLDLMVQRGVRPNACTY------------------------------------NTLMDGF 322
            LL +M+++G+ P+   Y                                    N++M+G+
Sbjct: 706  LLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGY 765

Query: 323  CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
               G+IN  E L  +M          SYNIL++GY K  ++   L LYR+MV +GIKP  
Sbjct: 766  LKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDN 825

Query: 383  VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            VTY  L  GL E   +E A+K  ++M  +GV  D   +   I    +   +  A++LF  
Sbjct: 826  VTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSY 885

Query: 443  LRIL-------KCELDIQAY---------NCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            ++ +       + + D++A          + ++ GLCK G+++ A  +F S+    +VP 
Sbjct: 886  MKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPT 945

Query: 487  VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            + T+  ++ GLC + ++D A  L   ME      DV+T+++LI G           +L  
Sbjct: 946  IATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYE 1005

Query: 547  KMKEKKVMPDAS 558
            +MK K ++P+ +
Sbjct: 1006 EMKSKGLLPNIT 1017



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 249/500 (49%), Gaps = 26/500 (5%)

Query: 73   LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
            ++A   + K Y +R+  +    ++ ++N +I+ +C+ G V   F  +  ++R  + P+  
Sbjct: 559  MIAEAEQFKQYMSRMKISF---DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 615

Query: 133  TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            T+ SL++GL     +++A      L    C  +  T NTL+ G+C+ G    AL+L E+M
Sbjct: 616  TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 675

Query: 193  ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
               N        P+T TY+ ++DG CK G V  A  L   M ++ + PD + Y  L++GL
Sbjct: 676  VTRN------ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGL 729

Query: 253  CHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
             +      A  +F E++  +G+    + +N +M+   K  +++E  RL+  M +  V P+
Sbjct: 730  VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPS 789

Query: 312  ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
            + +YN LM G+   G+++R   L+  M   G K D+V+Y +LI G C+   +E A+    
Sbjct: 790  SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 849

Query: 372  EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF----------------DEMQRDGVAA 415
            +MV +G+ P  + ++ L     E  ++ +AL+LF                ++M+  GV  
Sbjct: 850  KMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVP 909

Query: 416  DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
                 ++ + GLCK G + EA+ +F ++        I  +  L+ GLCK  ++  A+ L 
Sbjct: 910  SEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLK 969

Query: 476  CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
              +    L  +VVTYN++I GLCN   +  A DL+ +M+     P++ T+  L       
Sbjct: 970  QLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYAT 1029

Query: 536  NEPSKVNELLHKMKEKKVMP 555
                   +LL  ++++ ++P
Sbjct: 1030 GTMQDGEKLLKDIEDRGIVP 1049



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 186/392 (47%), Gaps = 4/392 (1%)

Query: 203 CKP-NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           C P N  +   +++   KEG V  A A    M +      + + N++++ L   N     
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR-PNACTYNTLMD 320
                E +D+     V T N++++ LC   K+ +A  +L  M  +  R PNA TYNT+++
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILN 272

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            +   G+   A  +   ME  G + D  +YNI+I+  CK K    A  L + M    + P
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTP 332

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              +YNTL  G F   ++  A+ +F++M R  +     TYT  IDG C+NG   EA  + 
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             ++I         Y+ L++G CK  +L  A +L   L    +  N   Y I+I G C  
Sbjct: 393 YEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQL 452

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++ KA+ +   M  +   PDVIT+  LI+G  ++    +  E+L +M++  V+P+  + 
Sbjct: 453 GEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLY 512

Query: 561 SIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           + +V    K   + ++L  F+   R G V  S
Sbjct: 513 TTLVFYFCKAGHAKEALKYFVDIYRSGLVANS 544



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 215/464 (46%), Gaps = 36/464 (7%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
            EAF ++D M+R H  PP + ++  LL  L +  H      +   L       +  T N L
Sbjct: 597  EAFSVYDNMVR-HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 655

Query: 103  INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
            +   CK G +        +++     P+  T+  L+ G     +++ A  L   +   G 
Sbjct: 656  LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL 715

Query: 163  EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK----PNTVTYSTIIDGLC 218
             P+ I Y  L+NGL   G    A  +F+E         ++CK     + + Y+++++G  
Sbjct: 716  VPDTIAYTCLLNGLVNEGQVKAASYMFQE---------IICKEGLYADCIAYNSMMNGYL 766

Query: 219  KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            K G +++ + L   M +  + P   +YN L+HG       +    L+ +M+ +G++P  V
Sbjct: 767  KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 826

Query: 279  TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG-- 336
            T+ +++  LC+   ++ A + L+ MV  GV P+   ++ L+  F    K++ A +LF   
Sbjct: 827  TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 886

Query: 337  --------------SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
                           M+++G    +V+ + ++ G CK  +VEEA+ ++  ++  G+ PT+
Sbjct: 887  KWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 946

Query: 383  VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
             T+ TL  GL +  +++ A  L   M+  G+  D  TY   I GLC    I +A++L+  
Sbjct: 947  ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEE 1006

Query: 443  LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            ++      +I  Y  L   +  +G ++   +L   +    +VP+
Sbjct: 1007 MKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 224/420 (53%), Gaps = 7/420 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN YTYN LI+  C+ G+V         +L     P+  T+N L++         +A  L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              ++A GC PN +TYN L++G+C  G    AL L   + +        CKP+TV Y+T+
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG------CKPSTVNYNTV 118

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC       A  L  +M  EN  P+  T+N +I+ LC      +A +L  +M   G 
Sbjct: 119 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 178

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             ++VT+N I++ LC+ R +D A  LL  M   G +P+  TYNTL+ G C   +   AEE
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L  +M   GC  D+V++N LI   C+   + +A+ ++++M  KG  P  +TY+T+  GL 
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  +++ AL+LF+EM   G   D + Y    + L  +  I EA++  R L+         
Sbjct: 299 KATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 357

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN ++ GLC++G+ +FA ++   +     +P+ +TY I+I+GL  +G +++AR+L + +
Sbjct: 358 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/426 (33%), Positives = 206/426 (48%), Gaps = 23/426 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           +A  + D ML      P V ++NILL +  K + Y   +       A G  PN  TYN+L
Sbjct: 25  DALSVLDDML-CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL 83

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  C  G V         +      P+   +N+++KGL +  R  +A  L T++    C
Sbjct: 84  MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 143

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN  T+N +I  LCR G    A+ L E+M+         C  N VTY+ II+GLC++  
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG------CTANIVTYNAIINGLCEQRN 197

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  L  +MK     PD+VTYN+L+ GLC A  W +A+ L   M   G  P  VTFN 
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LC+   M +A  +   M  +G  PN+ TY+T++ G     K+++A ELF  M   G
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D + Y +L      +  +EEA+   R++   GI P  V YN + LGL    + E A+
Sbjct: 318 FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 376

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +   M   G   D  TY   I+GL   GY+ EA EL   L    C  D+     L++ L
Sbjct: 377 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL----CSRDV-----LVNSL 427

Query: 463 CKSGRL 468
            KS  L
Sbjct: 428 IKSEAL 433



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 212/433 (48%), Gaps = 40/433 (9%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           +PN  TYN LI+ LC  G    AL++ ++M      +   C P+ VTY+ +++  CK   
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDM------LCRGCAPDVVTYNILLEATCKGRG 57

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             +A  L   M+ E   P+ VTYN L+ G+C   D ++A  L   +   G +PS V +N 
Sbjct: 58  YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LC   +  +A  L+  M++    PN  T+N ++   C  G + +A +L   M   G
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  + V+YN +ING C+ + V+ A+ L  +M S G KP +VTYNTL  GL    +   A 
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L D M ++G   D  T+ T I  LC+ G +++A+E+F+ +    C  +   Y+ +I GL
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297

Query: 463 CKSGRLKFAWELFCSLPH----------------------------------GVLVPNVV 488
            K+ +L  A ELF  + H                                    + P+ V
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 357

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            YN ++ GLC +G+ + A D+   M  +   PD +T+ +LI G       ++  ELL K+
Sbjct: 358 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417

Query: 549 KEKKVMPDASIVS 561
             + V+ ++ I S
Sbjct: 418 CSRDVLVNSLIKS 430



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 167/319 (52%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P+  TYN LIH LC      +A  +  +M+ +G  P VVT+N++++  CK R   +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L+DLM   G  PN  TYN LMDG C  G ++ A EL  ++ S GCK   V+YN ++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C  +   +A  L  EM+ +   P   T+N +   L     ++ A++L ++M + G  A+ 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   I+GLC+   +  A+ L   ++   C+ DI  YN L+ GLC + R   A EL  +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P+ VT+N +I  LC  G M  A ++F  M +    P+ IT+  +I G  +  +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 538 PSKVNELLHKMKEKKVMPD 556
             +  EL ++M  K   PD
Sbjct: 303 LDQALELFNEMGHKGFNPD 321



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 182/367 (49%), Gaps = 1/367 (0%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +PN  TY+ +I  LC+ G V  A ++   M      PDVVTYN L+   C    + +A  
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L   M  +G  P+ VT+NV+MD +C    +D+A  LL  +   G +P+   YNT++ G C
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              +   A+EL   M    C  ++ ++N++I   C+   +++A+ L  +M   G    +V
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN +  GL E   V+ A+ L  +M+  G   D  TY T + GLC     ++A EL   +
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C  D   +N LI  LC+ G +  A E+F  +P     PN +TY+ +I GL    ++
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A +LF +M      PD I + +L       +   +  + + K+++  + P   + + +
Sbjct: 304 DQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362

Query: 564 VDLLVKN 570
           +  L +N
Sbjct: 363 LLGLCRN 369



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 129/280 (46%)

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           V+PNA TYN L+   C  G++  A  +   M   GC  D V+YNIL+   CK +   +A+
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   M ++G  P  VTYN L  G+     V+ AL+L   +   G    T  Y T + GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C      +A EL   +    C  +   +N +I  LC+ G L+ A +L   +       N+
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTYN +I GLC    +D A  L   M+     PD++T++ L+ G           EL+  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           M +   +PD    + ++  L +  + + ++  F     +G
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 282


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 139/392 (35%), Positives = 205/392 (52%), Gaps = 5/392 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
            R  A  + PNLYTY++LI C C+ GR+ LGF A G +++  F   A TF  L+KGL A+
Sbjct: 73  ARAGADEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCAD 132

Query: 145 SRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
            R  +A  +   ++   GC PNV +   L+ GLC    +  AL L + M +  G+    C
Sbjct: 133 KRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGD----C 188

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+ V Y+T+I+G  KEG  DKA A + +M D+ I PDVVTY+S+I  LC A   ++A  
Sbjct: 189 PPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAME 248

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +   M+  GV P+  T+N I+   C + ++ EA   L +M   GV P+  T N LMD  C
Sbjct: 249 VLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLC 308

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              +   A ++F SM   G K D  +Y  L+ GY     + E   L   MV  GI+P   
Sbjct: 309 KNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHH 368

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            +N L     +  +V+ A+ +F +M++ G++ +   Y T ID LCK G + +AV   + +
Sbjct: 369 VFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQM 428

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
                  DI  Y  LI G C   + + A EL 
Sbjct: 429 INEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 200/439 (45%), Gaps = 25/439 (5%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL--FTKLKAFGCE---PNVITYNTLI 173
           F  +LR       AT   L + L   +R   AAA+  + ++   G +   PN+ TY+ LI
Sbjct: 35  FDELLRR---GKGATIYGLNRALDDVARHSPAAAVSRYNRMARAGADEVTPNLYTYSVLI 91

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN----TVTYSTIIDGLCKEGFVDKAKAL 229
              CR G     L+L      G   +G V K       +T++ ++ GLC +     A  +
Sbjct: 92  GCCCRAGR----LDL------GFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 141

Query: 230 FL-QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDE 286
            L +M      P+V +   L+ GLC  N   EA  L   M D G    P VV +N +++ 
Sbjct: 142 VLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVING 201

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K    D+A      M  +G+ P+  TY++++   C    +++A E+  +M   G   +
Sbjct: 202 FFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPN 261

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             +YN +++GYC + ++ EA+   + M S G++P VVT N L   L +  +   A K+F+
Sbjct: 262 CRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFN 321

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M + G+  D  TY T + G    G ++E  +L   +     + +   +N LI    K  
Sbjct: 322 SMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQE 381

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           ++  A  +F  +    L PN V Y  +I  LC  G++  A      M      PD+I + 
Sbjct: 382 KVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYT 441

Query: 527 MLIHGFIRINEPSKVNELL 545
            LIHGF   ++  K  EL+
Sbjct: 442 PLIHGFCTCDKWEKAEELI 460



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 170/337 (50%), Gaps = 3/337 (0%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + P++ TY+ LI   C A   +        ++ +G +   +TF  ++  LC +++  +
Sbjct: 78  DEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 137

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNI 352
           A  + L  M Q G  PN  +   L+ G C   +   A EL   M   G  C  D V YN 
Sbjct: 138 AMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNT 197

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +ING+ K  + ++A + Y EM  +GI P VVTY+++   L +   ++ A+++ + M ++G
Sbjct: 198 VINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 257

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  + RTY + + G C +G + EA+   + +     E D+   N L+D LCK+ R   A 
Sbjct: 258 VMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEAR 317

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F S+    L P++ TY  ++QG    G + +  DL   M  N   P+   F++LI  +
Sbjct: 318 KIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAY 377

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +  +   +  KM+++ + P+A     V+D+L K
Sbjct: 378 AKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCK 414



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 155/318 (48%), Gaps = 3/318 (0%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V P++ T++V++   C+  ++D     L  ++++G R  A T+  L+ G C   + + A 
Sbjct: 80  VTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 139

Query: 333 EL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLF 389
           ++    M  +GC  +  S  IL+ G C     +EAL L + M   G    P VV YNT+ 
Sbjct: 140 DIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVI 199

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G F+    + A   + EM   G+  D  TY++ I  LCK   + +A+E+  T+      
Sbjct: 200 NGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 259

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            + + YN ++ G C SG+L  A      +    + P+VVT N+++  LC + +  +AR +
Sbjct: 260 PNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKI 319

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F  M +    PD+ T+  L+ G+       ++++LL  M    + P+  + +I++    K
Sbjct: 320 FNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAK 379

Query: 570 NEISLKSLPSFLVQERQG 587
            E   +++  F    +QG
Sbjct: 380 QEKVDEAMLVFSKMRQQG 397



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 130/271 (47%), Gaps = 22/271 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TG 91
           +EGD     P++A+  +  M       P V +++ ++A+L K +  D  +         G
Sbjct: 204 KEGD-----PDKAYATYHEMFD-QGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 257

Query: 92  LFPNLYTYNILINCFCKIGRVS--LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  G+++  +GF+    +      P+  T N L+  L    R  E
Sbjct: 258 VMPNCRTYNSIVHGYCSSGQLTEAIGFLKM--MCSDGVEPDVVTCNLLMDYLCKNRRCTE 315

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F  +   G +P++ TY TL+ G    G  +   +L + M   NG      +PN   
Sbjct: 316 ARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMV-WNG-----IQPNHHV 369

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++ +I    K+  VD+A  +F +M+ + ++P+ V Y ++I  LC      +A     +M+
Sbjct: 370 FNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMI 429

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++G+ P ++ +  ++   C   K ++A  L+
Sbjct: 430 NEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 269/546 (49%), Gaps = 16/546 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILI 103
           A C+ + M R       V ++NI++  L + K          R+    L P+  TYN LI
Sbjct: 279 ALCVLEDMER-DSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLI 337

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N F + G+++     F  +LR    P+ AT+ ++I G     RI +A ++ ++++  G  
Sbjct: 338 NGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVM 397

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ +TY+ L+NG C+      A+ L E++ +    I      N    + +IDG C+ G +
Sbjct: 398 PSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITI------NKTMRTILIDGFCQVGEI 451

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            KAK +   M ++ I+PDV+TY++LI+G+C     +E K +   M   G+ P+ V +  +
Sbjct: 452 SKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 511

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   CK   + EA +    + +RG+  N   +N L+  F   G I  AE     M  M  
Sbjct: 512 ICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNI 571

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D VS+N +I+ YC    +  A S+Y +MV  G  P V TY  L  GL +   +  A +
Sbjct: 572 SFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQ 631

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
               +     A D +T+   + G+C+ G + EA++L   +    C  DI  Y  L+ G C
Sbjct: 632 FMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFC 691

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM--EENAAAPD 521
           + G++  A  +   +    +VP+ V Y  ++ GL N+GQ+  A  +F ++  +E   A D
Sbjct: 692 RKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYA-D 750

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            I ++ L++G+++    + +  ++  M + +V P+++  +I++   VK     KSL  + 
Sbjct: 751 CIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYK 810

Query: 582 VQERQG 587
              R+G
Sbjct: 811 YMVRKG 816



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 252/530 (47%), Gaps = 15/530 (2%)

Query: 66  PVSSFNIL--LASLAKNKHYDT--RLNATGLFP-NLYTYNILINCFCKIGRVSLGFIAFG 120
           PVS   IL  L    ++KH     R +    FP  + T NIL+N  C  G          
Sbjct: 191 PVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQ 250

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           + ++SC   N+ T+N+++     + R   A  +   ++    + +V TYN +I+ LCR  
Sbjct: 251 K-MKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIK 309

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            +  A  L + M   +        P+  TY+T+I+G  +EG ++ A+ +F  M  +N+ P
Sbjct: 310 RSTRAFLLLKRMRKDD------LTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVP 363

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            V TY ++I G C     ++A  +  EM   GV PS +T++ +++  CK   +  A  L+
Sbjct: 364 SVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLM 423

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + +  RG+  N      L+DGFC +G+I++A+++  SM   G   D ++Y+ LING C+ 
Sbjct: 424 EDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRM 483

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ E   +   M   GI P  V Y TL     +   V+ ALK F ++ R G+ A+   +
Sbjct: 484 AKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIH 543

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              +    + G I EA    + +  +    D  ++N +ID  C  G +  A+ ++  +  
Sbjct: 544 NALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVR 603

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
               PNV TY  +++GLC  G + +AR     + +   A D  TF+ L+ G  R     +
Sbjct: 604 YGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDE 663

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
             +L  KM +   +PD    +I++    +     K LP+ ++ +   E G
Sbjct: 664 ALDLCEKMIKNNCLPDIHTYTILLSGFCRKG---KILPALVILQMMLEKG 710



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 244/467 (52%), Gaps = 13/467 (2%)

Query: 81   KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
            + Y +R+N +  F ++ ++N +I+ +C  G +   F  +  ++R  ++PN  T+ +L++G
Sbjct: 563  RQYMSRMNIS--FDSV-SFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRG 619

Query: 141  LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
            L     +++A    + L       +  T+N L+ G+CR G    AL+L E+M   N    
Sbjct: 620  LCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN---- 675

Query: 201  VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
              C P+  TY+ ++ G C++G +  A  +   M ++ + PD V Y  L++GL +      
Sbjct: 676  --CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKA 733

Query: 261  AKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  +F E++  +G+    + +N +M+   K+R ++   R++  M Q  V PN+ +YN LM
Sbjct: 734  ASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILM 793

Query: 320  DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
             G+   G+ +++  L+  M   G + D+V+Y +LI G  +   ++ A+    +MV +GI 
Sbjct: 794  HGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIF 853

Query: 380  PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
            P  + ++ L     E  ++ +AL++F+ M+   ++  ++T++  I+GL + GY+  + ++
Sbjct: 854  PDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKV 913

Query: 440  FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
               +  +  + +   Y  L++  C+ G +  A+ L   +    +VP  V  + +I+GLC 
Sbjct: 914  LHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR 973

Query: 500  DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
             G++++A  +F  M  +   P V TF  L+H   +    SK+ + LH
Sbjct: 974  CGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCK---ESKIADALH 1017



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 222/459 (48%), Gaps = 13/459 (2%)

Query: 69   SFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            +FN LL  + +    D  L+           P+++TY IL++ FC+ G++    +    +
Sbjct: 647  TFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMM 706

Query: 123  LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF-GCEPNVITYNTLINGLCRTGH 181
            L     P+   +  L+ GL  E ++  A+ +F ++    G   + I YN+L+NG  ++ +
Sbjct: 707  LEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRN 766

Query: 182  TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                  +  +M            PN+ +Y+ ++ G  K G   K+  L+  M  + I PD
Sbjct: 767  VNTIKRMMSDMYQNE------VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPD 820

Query: 242  VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             VTY  LI GL      + A +   +M+ +G+ P  + F++++    +  KM  A ++ +
Sbjct: 821  NVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFN 880

Query: 302  LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
             M    + P++ T++ +++G    G ++ + ++   M  +G + +   Y  L+N  C+  
Sbjct: 881  CMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVG 940

Query: 362  EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            E++ A  L  EM + GI P  V  +++  GL    ++E A+ +F  M R G+     T+T
Sbjct: 941  EIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFT 1000

Query: 422  TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            T +  LCK   I +A+ L R + + +  +D+ +YN LI GLCK   +  A +L+  +   
Sbjct: 1001 TLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSK 1060

Query: 482  VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
             L PN+ TY  +   + + G++    +L  D+EE    P
Sbjct: 1061 GLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 256/534 (47%), Gaps = 31/534 (5%)

Query: 38   REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---- 93
            REG   +IT  E F    YM RM+ S   VS FN ++ S      Y  R N  G F    
Sbjct: 552  REG---MITEAEHF--RQYMSRMNISFDSVS-FNRIIDS------YCHRGNIVGAFSVYD 599

Query: 94   --------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
                    PN+ TY  L+   C+ G +         +L   F  +  TFN+L+ G+    
Sbjct: 600  DMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYG 659

Query: 146  RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
             + EA  L  K+    C P++ TY  L++G CR G  + AL + + M     E GVV  P
Sbjct: 660  TLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMML----EKGVV--P 713

Query: 206  NTVTYSTIIDGLCKEGFVDKAKALFLQMK-DENINPDVVTYNSLIHGLCHANDWNEAKRL 264
            +TV Y+ +++GL  EG V  A  +F ++   E +  D + YNSL++G   + + N  KR+
Sbjct: 714  DTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRM 773

Query: 265  FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              +M    V P+  ++N++M    K  +  ++  L   MV++G+RP+  TY  L+ G   
Sbjct: 774  MSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 833

Query: 325  MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             G I+ A +    M   G   D + ++ILI  + +  ++  AL ++  M    + P+  T
Sbjct: 834  CGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKT 893

Query: 385  YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            ++ +  GL     ++H+ K+  EM + G+  +   Y   ++  C+ G I  A  L   ++
Sbjct: 894  FSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMK 953

Query: 445  ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
             +       A + +I GLC+ G+L+ A  +F S+    +VP V T+  ++  LC + ++ 
Sbjct: 954  AIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIA 1013

Query: 505  KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             A  L   ME      DV+++++LI G  +    S   +L  +MK K + P+ +
Sbjct: 1014 DALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNIT 1067



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 217/436 (49%), Gaps = 13/436 (2%)

Query: 119 FGRILR--SCFTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F  +LR  S F P N   F  L+K    E ++++AA     +   G + + ++ NT++N 
Sbjct: 141 FTSLLRTISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNA 200

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L   G +        E       +GV       T + +++ LC  G   KA+ +  +MK 
Sbjct: 201 LVEEGESKHVWLFLRESLARKFPLGV------TTCNILLNSLCTNGEFRKAEDMLQKMKS 254

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
            +I+ + VTYN+++H       +  A  +  +M    VQ  V T+N+++D+LC+ ++   
Sbjct: 255 CHIS-NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTR 313

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  LL  M +  + P+ CTYNTL++GF   GKIN A  +F  M          +Y  +I+
Sbjct: 314 AFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMID 373

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           GYC+N+ +++ALS+  EM   G+ P+ +TY+ L  G  ++  +  A+ L ++++  G+  
Sbjct: 374 GYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITI 433

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +    T  IDG C+ G I +A ++ +++     + D+  Y+ LI+G+C+  ++    E+ 
Sbjct: 434 NKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEIL 493

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR- 534
             +    ++PN V Y  +I   C  G + +A   F+D+       + +  + L+H F R 
Sbjct: 494 SRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYRE 553

Query: 535 --INEPSKVNELLHKM 548
             I E     + + +M
Sbjct: 554 GMITEAEHFRQYMSRM 569



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 234/532 (43%), Gaps = 42/532 (7%)

Query: 74   LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
            +A + + K   +R+  +G+ PN   Y  LI  +CK G V      F  I R     N   
Sbjct: 483  MAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVI 542

Query: 134  FNSLIKGLHAESRIMEAA-----------------------------------ALFTKLK 158
             N+L+   + E  I EA                                    +++  + 
Sbjct: 543  HNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMV 602

Query: 159  AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             +G  PNV TY  L+ GLC+ GH + A      + +    I      +  T++ ++ G+C
Sbjct: 603  RYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAI------DEKTFNALLLGIC 656

Query: 219  KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            + G +D+A  L  +M   N  PD+ TY  L+ G C       A  +   M+++GV P  V
Sbjct: 657  RYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTV 716

Query: 279  TFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             +  +++ L    ++  AS +  +++ + G+  +   YN+LM+G+     +N  + +   
Sbjct: 717  AYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSD 776

Query: 338  MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            M       +  SYNIL++GY K  +  ++L LY+ MV KGI+P  VTY  L LGL E   
Sbjct: 777  MYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGL 836

Query: 398  VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            ++ A+K  ++M  +G+  D   +   I    +   +  A+++F  ++ L      + ++ 
Sbjct: 837  IDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSA 896

Query: 458  LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            +I+GL + G L  + ++   +    L PN   Y  ++   C  G++D+A  L  +M+   
Sbjct: 897  MINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIG 956

Query: 518  AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              P  +    +I G  R  +  +   +   M    ++P  +  + ++  L K
Sbjct: 957  IVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCK 1008



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 177/385 (45%), Gaps = 1/385 (0%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V +  ++    KE  V  A    L M D       V+ N++++ L    +        
Sbjct: 155 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFL 214

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            E + +     V T N++++ LC N +  +A  +L  M    +  N+ TYNT++  +   
Sbjct: 215 RESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHI-SNSVTYNTILHWYVKK 273

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+   A  +   ME    + D  +YNI+I+  C+ K    A  L + M    + P   TY
Sbjct: 274 GRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTY 333

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           NTL  G F   ++ HA  +F+ M R  +     TYTT IDG C+N  I +A+ +   ++I
Sbjct: 334 NTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQI 393

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                    Y+ L++G CK   L  A  L   L    +  N     I+I G C  G++ K
Sbjct: 394 TGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISK 453

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A+ +   M E+   PDVIT+  LI+G  R+ +  +  E+L +M++  ++P+  + + ++ 
Sbjct: 454 AKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLIC 513

Query: 566 LLVKNEISLKSLPSFLVQERQGEVG 590
              K     ++L  F+   R+G V 
Sbjct: 514 YYCKAGYVKEALKHFVDIYRRGLVA 538



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 13/235 (5%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            + A  +F+ M  +H SP    +F+ ++  L +  + D        +   GL PN   Y  
Sbjct: 873  HNALQVFNCMKWLHMSPSS-KTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIA 931

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            L+N  C++G +   F     +      P     +S+I+GL    ++ EA  +F+ +   G
Sbjct: 932  LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSG 991

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              P V T+ TL++ LC+      AL+L   M      + VV      +Y+ +I GLCK+ 
Sbjct: 992  MVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVV------SYNVLITGLCKDK 1045

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
             +  A  L+ +MK + + P++ TY +L   +         + L  ++ ++G+ P+
Sbjct: 1046 HISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPA 1100


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 245/476 (51%), Gaps = 7/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P   TY +LI    + G     +    ++      P+   FN +IKGL  +    +A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +LF ++   G  P+  TYN LI+ LC+      ALNL+E+M     E GV  KP  VTY
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM----NETGV--KPYIVTY 424

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            +++   C  G +D+A  L+ +M  +   P+VVTY +L+ G  +   +++A  L  EM  
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV  +  T+N +++ LC   ++ E   +L      G  P A TYN++++GF   G +  
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  ++  M + G   + V+Y   I+GYCK    + AL +  ++  KG++P +  YN+L  
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIF 604

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +   + HAL++   M +DG+  +   Y +FI G      + EA+ L+  +     +L
Sbjct: 605 GFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDL 664

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  LIDG  K G + FA +L+  +     +P+ +T+  +  GLC +G +D AR L 
Sbjct: 665 DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLL 724

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +M      P+V+ ++MLI+G++R  +  +   L  +M E+K+MPD +   I+V +
Sbjct: 725 DEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGM 780



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 249/554 (44%), Gaps = 48/554 (8%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
           +R    P     F++++ +  K   YD        + A+ + P+    ++ I   CK+  
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            +   +   ++  + F P   TFNS++  L    R+ EA  +  +L A G + +V+   T
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L++G C       AL++FEE        G+V  P  VTY+ +I G  +EG  +KA  L  
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM+D  + P    +N +I GL +   W +A  LF EM D G+ P   T+N+++  LC+ R
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 292 K-----------------------------------MDEASRLLDLMVQRGVRPNACTYN 316
           K                                   MDEA +L   M  +G  PN  TY 
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           TLM G       ++A  L   M+  G   +D +YN LING C    V E   + +   ++
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  PT +TYN++  G  +   +  A  ++ +M   G+  +  TYT+FIDG CK      A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           +++   +R      DI AYN LI G C+ G +  A ++   +    L+PN+  YN  I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             N   M++A  L+  M +     D  T+  LI GF +    +   +L  +M  K  +PD
Sbjct: 641 YKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700

Query: 557 ASIVSIVVDLLVKN 570
               + +   L +N
Sbjct: 701 HITFTALTHGLCRN 714



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 208/496 (41%), Gaps = 65/496 (13%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           TP+A +   L+      +   +A AL  +++  G   +   ++ ++    + G    A+ 
Sbjct: 139 TPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDAVR 198

Query: 188 LFEEMANGNGE---------IGVVCK--------------------PNTVTYSTIID--- 215
           LF+EM     E         I  +CK                    P   T+++++D   
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLV 258

Query: 216 --------------------------------GLCKEGFVDKAKALFLQMKDENINPDVV 243
                                           G C +  V KA  +F +   + + P  V
Sbjct: 259 KGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDV 318

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY  LI G        +A  L  +M D G+ PS   FN+++  L  ++   +A  L   M
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G+ P+A TYN L+   C   KI  A  L+  M   G K   V+Y+ L+  YC N  +
Sbjct: 379 ADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCM 437

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA+ LY EM  KG  P VVTY TL  G       + A  L  EM+++GV+ +  TY T 
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+GLC  G + E  E+ +             YN +I+G  K+G +  A+ ++  +    +
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN+VTY   I G C     D A  +  D+      PD+  ++ LI GF +    S   +
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617

Query: 544 LLHKMKEKKVMPDASI 559
           +L  M +  ++P+ S+
Sbjct: 618 VLVLMLKDGLLPNISV 633



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 152/356 (42%), Gaps = 34/356 (9%)

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M+   + PD  +   L+     +    +A  L  EM  +G       F+V+M    K  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
             D+A RL D M    + P+    +  +   C +   NRA  +   M+  G    D ++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +++   K   +EEAL +  E+++ G K +VV   TL  G     +V  AL +F+E  RD
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR-------------ILKCEL-------- 450
           G+     TYT  I G  + G   +A EL R +R             ++K  L        
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 451 -------------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
                        D   YN LI  LC+  +++ A  L+  +    + P +VTY+ ++   
Sbjct: 372 VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           C +G MD+A  L+ +M      P+V+T+  L+ G I      K   LL +MK+  V
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 38/289 (13%)

Query: 303 MVQRGVRPNACT-----------------------------------YNTLMDGFCLMGK 327
           M  RGV P+A +                                   ++ +M      G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + A  LF  M +   + D    ++ I   CK ++   AL + R+M   G  P   T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRIL 446
           +   L +  ++E AL + DE+   G        TT + G C    + +A+++F  TLR  
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  Y  LI G  + G  + A+EL   +    L+P+   +N++I+GL ND     A
Sbjct: 313 LVPTDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             LF +M + +  PD  T+++LIH   +  +  +   L  KM E  V P
Sbjct: 372 VSLFKEMAD-SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 5/243 (2%)

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           SME+ G   D  S   L+    ++    +AL+L  EM  KG       ++ +    F+  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             + A++LFDEM    +  D R  +  I  LCK      A+ + R ++          +N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            ++D L K GR++ A  +   L       +VV    ++ G C   ++ KA D+F +   +
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-----DLLVKNE 571
              P  +T+ +LI G      P K  EL  +M++  ++P  +  ++V+     D L K+ 
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 572 ISL 574
           +SL
Sbjct: 372 VSL 374


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 247/525 (47%), Gaps = 24/525 (4%)

Query: 54  FDYMLRM---HPSPPPVSSFNILLASLAK-NKHYDTR--LNATGLFPNLYTYNILINCFC 107
            D  LR+    P PP V   N L+  L +  +  D    + A G      TY  L++ +C
Sbjct: 80  LDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEACGPEATAATYGALVDGYC 139

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G +       G +       +A   N LI  L    R+ +A  +   +   GC P+V+
Sbjct: 140 RAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVV 199

Query: 168 TYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           TYN L+   C+      AL L + M A G       C+PN VTY+ IID +C+EG VD+A
Sbjct: 200 TYNILLQAACKGRGYRQALELIDFMRAEG-------CEPNNVTYNVIIDAMCREGDVDQA 252

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + L   +      P+ V YN+++ G C    W +A  +  EM+ +   P+  T NVI++ 
Sbjct: 253 RELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINT 312

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LC+   + + +  L+ M + G   N  TYN ++ G C  G ++ A EL  +M+S GCK D
Sbjct: 313 LCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPD 372

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+YN ++ G C     E+A  L  +M      P   T+NT+     +   +  A ++F 
Sbjct: 373 IVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFK 432

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   G   ++ TY+T I GL K G + +A+EL   +       D + Y  L + L K  
Sbjct: 433 QMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNKED 491

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +++   ++   L    + P  V YN ++ GLC +G+ D A D+  DM      PD  T+ 
Sbjct: 492 KIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYI 551

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +LI G        +  ELL ++  + V+ ++         L+KNE
Sbjct: 552 ILIEGLFYEGYSKEARELLSRLCSRDVLSNS---------LIKNE 587



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 176/386 (45%), Gaps = 44/386 (11%)

Query: 205 PNTVTYSTIIDGLCKEGF-VDKAKALFLQMKDENINPDV--VTYNSLIHGLCHANDWNEA 261
           P+    + ++  LC+ G   D A+ +      E   P+    TY +L+ G C A    +A
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVV------EACGPEATAATYGALVDGYCRAGLLEDA 147

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           +R+   M       S    N ++  LC+  ++ +A  +LD M+ RG  P+  TYN L+  
Sbjct: 148 RRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQA 207

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C      +A EL   M + GC+ ++V+YN++I+  C+  +V++A  L   + S+G KP 
Sbjct: 208 ACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPN 267

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            V YNT+  G   I +   A ++ DEM R+    +  T    I+ LC+ G +++ V L+ 
Sbjct: 268 TVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKG-LLQKVTLY- 325

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                            ++ + K G                   NVVTYN +I G+C  G
Sbjct: 326 -----------------LEKMSKHG----------------CTANVVTYNAVISGMCEQG 352

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +D A +L  +M+     PD++T++ ++ G    +      EL+ KM +   +PD S  +
Sbjct: 353 NVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFN 412

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQG 587
            ++    +  + L++   F     +G
Sbjct: 413 TIISFWCQKGLILQAFEVFKQMPEKG 438



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 176/417 (42%), Gaps = 82/417 (19%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNIL 102
           +A  + D ML      P V ++NILL +  K + Y   L       A G  PN  TYN++
Sbjct: 181 DALVVLDGML-CRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVI 239

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C+ G V         +      PN   +N+++KG  +  R ++A  +  ++    C
Sbjct: 240 IDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENC 299

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN  T N +IN LCR G  +  + L+ E  + +G     C  N VTY+ +I G+C++G 
Sbjct: 300 PPNEATLNVIINTLCRKG-LLQKVTLYLEKMSKHG-----CTANVVTYNAVISGMCEQGN 353

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI---------------- 266
           VD A  L   M+     PD+VTYN+++ GLC A+ W +A+ L I                
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNT 413

Query: 267 -------------------EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
                              +M ++G  P+  T++ I+  L K  KM++A  LL+ M  +G
Sbjct: 414 IISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473

Query: 308 ----------------------------------VRPNACTYNTLMDGFCLMGKINRAEE 333
                                             + P    YNT++ G C  GK + A +
Sbjct: 474 FNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAID 533

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           +   M S GC  D+ +Y ILI G       +EA  L   + S+ +    +  N   L
Sbjct: 534 VLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALL 590


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 239/490 (48%), Gaps = 34/490 (6%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++L+  + ++G       A  +  R  F P+  + N L+  L    +I  A A++  LK 
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  PN  TY   I  LCR G+   A+++F EM     E GV   PN VT ST I+GLC 
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREME----EAGV--NPNAVTCSTYIEGLCS 274

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
               D        ++  N   D   Y ++I G C      EA+ +FI+M+++G+ P    
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPN----------------ACTYNTLMDGFC 323
           +  ++   CK   + +A  L + MV  G++ N                   YN ++D  C
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALC 394

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +GK+  A EL   M+      D V Y  LI GYC   ++ +A +++ EM  +GI+P +V
Sbjct: 395 KLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIV 454

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN L  G       + AL+L D +   G+  ++ T+   I+GLC  G + EA     TL
Sbjct: 455 TYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL 514

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP-HGVLV-------PNVVTYNIMIQ 495
              KC   ++ Y+ ++DG CK+   + A+ELF  L   G+L        PN + Y  +I 
Sbjct: 515 ED-KC---LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIG 570

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             C DG M +A+ +F  + E    PDVIT+ M+I+G+ R+N   +  ++ + MKE+ + P
Sbjct: 571 AFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP 630

Query: 556 DASIVSIVVD 565
           D    ++V+D
Sbjct: 631 DVITYTVVLD 640



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 240/490 (48%), Gaps = 34/490 (6%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++ + N L+N   + G++ +    +  + R    PN  T+   IK L  +    EA
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F +++  G  PN +T +T I GLC    + +       +   N  I      +T  Y
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPI------DTFAY 300

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL------ 264
           + +I G C E  + +A+ +F+ M +E I PD   Y +LIH  C A +  +A  L      
Sbjct: 301 TAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360

Query: 265 ----------FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                     F E  D G+    V +N+++D LCK  K++EA  LL+ M  R +  +   
Sbjct: 361 NGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 420

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y TL+ G+CL GK+  A+ +F  M+  G + D V+YNIL+ G+ +N   +EAL L   + 
Sbjct: 421 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 480

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           ++G+KP   T+N +  GL    +V+ A    + ++   +      Y+  +DG CK  +  
Sbjct: 481 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL----ENYSAMVDGYCKANFTR 536

Query: 435 EAVELFRTLR---ILK-CELDIQA----YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           +A ELF  L    IL+   LD++     Y  LI   C+ G +K A  +F  L    + P+
Sbjct: 537 KAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPD 596

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V+TY +MI G C    + +ARD+F DM+E    PDVIT+ +++ G  + N       L  
Sbjct: 597 VITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYD 656

Query: 547 KMKEKKVMPD 556
           +M  + + PD
Sbjct: 657 EMIARGLQPD 666



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 239/477 (50%), Gaps = 31/477 (6%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
           A  I+ ++ R+  +P   + + I + +L +  +++  ++        G+ PN  T +  I
Sbjct: 211 AVAIYRHLKRLGLNPNDYT-YGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
              C   R  LG+ A  R LR+   P +   + ++I+G  +E ++ EA  +F  +   G 
Sbjct: 270 EGLCSHKRSDLGYEAL-RALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGI 328

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK----------PNTVTYST 212
            P+   Y  LI+  C+ G+ + A+ L  +M +   +  +V +           + V Y+ 
Sbjct: 329 APDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNI 388

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++D LCK G V++A  L  +MK   ++ DVV Y +LI G C      +AK +F EM ++G
Sbjct: 389 VVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERG 448

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           ++P +VT+N+++    +N    EA  LLD +  +G++PN+ T+N +++G C+ GK+  AE
Sbjct: 449 IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAE 508

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI--------KPTVVT 384
               ++E    ++    Y+ +++GYCK     +A  L+  +  +GI        +P  + 
Sbjct: 509 AFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIM 564

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L         ++ A  +FD +   G+  D  TYT  I+G C+   + EA ++F  ++
Sbjct: 565 YGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMK 624

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
               + D+  Y  ++DG  K+  L+ A  L+  +    L P++VTY  ++ G CN G
Sbjct: 625 ERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFG 681



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 206/476 (43%), Gaps = 75/476 (15%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI---------- 199
           A + FT+LK  G + NV TY  LI  LCR        +L  E+      +          
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 200 ------GVVCKPNTVTYSTIIDGLCKE----GFVDKAKALFLQMKDENINPDVVTYNSLI 249
                 G V   ++     ++D L K     G  D+A     Q K     P +++ N L+
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLM 199

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           + L      + A  ++  +   G+ P+  T+ + +  LC+    +EA  +   M + GV 
Sbjct: 200 NRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN 259

Query: 310 PNACT-----------------------------------YNTLMDGFCLMGKINRAEEL 334
           PNA T                                   Y  ++ GFC   K+  AE++
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDV 319

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT---------- 384
           F  M + G   D   Y  LI+ YCK   + +A++L+ +MVS GIK  +V           
Sbjct: 320 FIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGI 379

Query: 385 ------YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
                 YN +   L ++ +VE A++L +EM+   ++ D   YTT I G C  G +++A  
Sbjct: 380 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 439

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +F  ++    E DI  YN L+ G  ++G  K A EL   +    L PN  T+N +I+GLC
Sbjct: 440 MFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC 499

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
             G++ +A + FL+  E+    +   +  ++ G+ + N   K  EL  ++ ++ ++
Sbjct: 500 MAGKVKEA-EAFLNTLEDKCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGIL 551



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 41/355 (11%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV--- 282
           A + F Q+K+     +V TY +LI  LC      + + L  E++  G + SV+ F++   
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVLGFDITAL 137

Query: 283 --IMDELCKNRKMDEASRL---LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             ++ E     + + +S L   LD++V+  VR               +G  + A +    
Sbjct: 138 FDVLREGGGEVEGEHSSVLILVLDMLVKAYVR---------------VGMFDEAIDALFQ 182

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            +  G     +S N L+N   ++ +++ A+++YR +   G+ P   TY      L     
Sbjct: 183 TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E A+ +F EM+  GV  +  T +T+I+GLC +       E  R LR     +D  AY  
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I G C   +LK A ++F  + +  + P+   Y  +I   C  G + +A  L  DM  N 
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362

Query: 518 AAP----------------DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
                              D + +++++    ++ +  +  ELL++MK +++  D
Sbjct: 363 IKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLD 417


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 253/498 (50%), Gaps = 20/498 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN+L+  L  + H +       ++ A G  PN +T+ IL+  +C+ G  S G   
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G++      PN   +N+LI     E +  +A  L  K++  G  P+V T+N+ I+ LC 
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G  + A  +F +M   + E+G+   PN +TY  ++ G CKEG +++AK L   MK    
Sbjct: 265 SGKILEASRIFRDMQI-DEELGLP-HPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN 322

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             ++ +YN  + GL       EA  +  EM+  G++P + ++N++MD LCKN  + +A  
Sbjct: 323 FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARM 382

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+ LM++ G+ P+  TY+TL+ G+C  GK+  A  L   M S  C  +  + N+L++   
Sbjct: 383 LMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLW 442

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   + EA +L ++M  KG     VT N +   L    Q++ A+++ + M   G AA   
Sbjct: 443 KEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGN 502

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
              +FI GL  +           T+   KC  D+  Y+ +I GLCK+GRL  A + F  +
Sbjct: 503 LGNSFI-GLVDD-----------TISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEM 550

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L P+   Y+  I   C +G++  A  +  DME+      + T++ LI G    N+ 
Sbjct: 551 MSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQI 610

Query: 539 SKVNELLHKMKEKKVMPD 556
            ++  L+ +M+EK V PD
Sbjct: 611 FELYGLIDEMREKGVSPD 628



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 216/481 (44%), Gaps = 56/481 (11%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G+ PN   YN LI+ FCK G+         ++      P+  TFNS I  L    
Sbjct: 207 QMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSG 266

Query: 146 RIMEAAALFTKLK---AFGC-EPNVITYNTLINGLCRTGHTMIALNLFEEMANG------ 195
           +I+EA+ +F  ++     G   PNVITY  ++ G C+ G    A  L + M         
Sbjct: 267 KILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINL 326

Query: 196 ------------NGEI-----------GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
                       NG++           G+  +P+  +Y+ ++DGLCK G +  A+ L   
Sbjct: 327 ESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGL 386

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M    I PD VTY++L+HG C      EA  L  EM+     P+  T NV++  L K  +
Sbjct: 387 MIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGR 446

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG---------- 342
           + EA  LL  M ++G   +  T N +++  C  G++++A E+   M + G          
Sbjct: 447 ISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNS 506

Query: 343 -------------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
                        C  D V+Y+ +I+G CK   +++A   + EM+SKG++P    Y+T  
Sbjct: 507 FIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFI 566

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                  ++  A ++  +M++ G     +TY + I GL     I E   L   +R     
Sbjct: 567 HSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVS 626

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+  YN +++ LC+ GR+  A  +   +    + PN+ ++ I+I+  C       + ++
Sbjct: 627 PDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEV 686

Query: 510 F 510
           F
Sbjct: 687 F 687



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 237/515 (46%), Gaps = 65/515 (12%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+ TY +++  FCK G +         + R+    N  ++N  + GL    +++EA  +
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   G EP++ +YN +++GLC+ G    A  L   M   NG +     P+TVTYST+
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIR-NGIL-----PDTVTYSTL 402

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + G C +G V +A  L  +M   N +P+  T N L+H L      +EA+ L  +M ++G 
Sbjct: 403 LHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG-----------------------VRP 310
               VT N+I++ LC N ++D+A  +++ M   G                         P
Sbjct: 463 GVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTP 522

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  TY+T++ G C  G+++ A++ F  M S G + D   Y+  I+ +C+  ++  A  + 
Sbjct: 523 DLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL 582

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           ++M  +G   T+ TYN+L LGL   +Q+     L DEM+  GV+ D  TY   ++ LC+ 
Sbjct: 583 KDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG 642

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS------------------------- 465
           G I +A  +   +       +I ++  LI   CK+                         
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYT 702

Query: 466 ---------GRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
                    G++  A ELF  +L     + N + Y  +I  LC D +++ A D+   + +
Sbjct: 703 LMFNELLVGGKVAEAKELFETALDRSFDIGNFL-YKDLIDRLCKDEKLEAASDVLHRLID 761

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
                D  +F  +I GF ++      +EL  +M E
Sbjct: 762 KGYQFDPASFMPVIDGFGKMGNKHVADELAERMME 796



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 191/371 (51%), Gaps = 4/371 (1%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +P+   Y+ ++    +E  V+    L+  M    ++P+  T+N LI  LC +    +A+ 
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           LF +M  +G +P+  TF +++   C+     +   LL  M   G+ PN   YNTL+  FC
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGI-K 379
             GK + AE+L   M   G      ++N  I+  C + ++ EA  ++R+M      G+  
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V+TY  + +G  +   +E A  L D M+R+    +  +Y  ++ GL +NG ++EA  +
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            + +  +  E DI +YN ++DGLCK+G L  A  L   +    ++P+ VTY+ ++ G C+
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++ +A +L  +M  N  +P+  T ++L+H   +    S+   LL KM EK    D   
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVT 468

Query: 560 VSIVVDLLVKN 570
            +I+++ L  N
Sbjct: 469 CNIIINALCNN 479



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 217/495 (43%), Gaps = 71/495 (14%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           F NL +YNI +    + G++   +I    +L     P+  ++N ++ GL     + +A  
Sbjct: 323 FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARM 382

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L   +   G  P+ +TY+TL++G C  G    A NL  EM + N      C PNT T + 
Sbjct: 383 LMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN------CSPNTYTCNV 436

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL-------- 264
           ++  L KEG + +A+ L  +M ++    D VT N +I+ LC+    ++A  +        
Sbjct: 437 LLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496

Query: 265 ----------FIEMMDQGVQ-----PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
                     FI ++D  +      P +VT++ I+  LCK  ++D+A +    M+ +G++
Sbjct: 497 SAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQ 556

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P++  Y+T +  FC  GKI+ A ++   ME  GC     +YN LI G     ++ E   L
Sbjct: 557 PDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGL 616

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EM  KG+ P V TYN +   L E  ++  A  + DEM + G++ +  ++   I   CK
Sbjct: 617 IDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCK 676

Query: 430 ----------------------------------NGYIIEAVELFRTLRILKCELDIQAY 455
                                              G + EA ELF T      ++    Y
Sbjct: 677 ACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLY 736

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-- 513
             LID LCK  +L+ A ++   L       +  ++  +I G    G    A +L   M  
Sbjct: 737 KDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMME 796

Query: 514 ------EENAAAPDV 522
                 +EN A P+V
Sbjct: 797 MASESNKENKAYPNV 811



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 194/441 (43%), Gaps = 60/441 (13%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY-DTRL-----NATGLFPNLYTYNIL 102
           EA+ +   ML +   P  + S+NI++  L KN    D R+        G+ P+  TY+ L
Sbjct: 344 EAWIVLKEMLGIGIEPD-IYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTL 402

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ +C  G+V         ++ +  +PN  T N L+  L  E RI EA  L  K+   G 
Sbjct: 403 LHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMAN---------GNGEIGVV--------CKP 205
             + +T N +IN LC  G    A+ +   M           GN  IG+V        C P
Sbjct: 463 GVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTP 522

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD------------------------ 241
           + VTYSTII GLCK G +D AK  F++M  + + PD                        
Sbjct: 523 DLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL 582

Query: 242 -----------VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
                      + TYNSLI GL   N   E   L  EM ++GV P V T+N +++ LC+ 
Sbjct: 583 KDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG 642

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            ++++A  +LD M+Q+G+ PN  ++  L+  FC       + E+F    ++ C H +  Y
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV-CGHKEALY 701

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            ++ N      +V EA  L+   + +        Y  L   L +  ++E A  +   +  
Sbjct: 702 TLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLID 761

Query: 411 DGVAADTRTYTTFIDGLCKNG 431
            G   D  ++   IDG  K G
Sbjct: 762 KGYQFDPASFMPVIDGFGKMG 782



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
           D  ++     P+L TY+ +I+  CK GR+      F  ++     P++A +++ I     
Sbjct: 512 DDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCR 571

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E +I  A  +   ++  GC   + TYN+LI GL           L +EM     E GV  
Sbjct: 572 EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMR----EKGV-- 625

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN---- 259
            P+  TY+ +++ LC+ G ++ A ++  +M  + I+P++ ++  LI   C A D+     
Sbjct: 626 SPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHE 685

Query: 260 ------------------------------EAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
                                         EAK LF   +D+        +  ++D LCK
Sbjct: 686 VFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCK 745

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           + K++ AS +L  ++ +G + +  ++  ++DGF  MG  + A+EL   M  M  + +
Sbjct: 746 DEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 230/472 (48%), Gaps = 49/472 (10%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
           +A  +FD +LR       +   N  LA +A++        Y+   R  A  + PNL TY 
Sbjct: 37  DARHVFDELLR-RGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI   C  GR+ LGF A G +++  F  +A  F  L+KGL A+ R  +A  +   ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC PNV +YN L+ GLC    +  AL L + M +  G+    C P+ V+Y+T+I+G  K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVINGFFK 211

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG +DKA   + +M D  I P+VVTY+S+I  LC A   ++A  +   M+  GV P+  T
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N I+   C + +  EA   L  M   GV P+  TYN+LMD  C  G+   A ++F SM 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G K +  +Y  L+ GY     + E   L   MV  GI P    ++ L     +  +V+
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+ +F +M++ G+  DT TY T I  LCK+G + +A+  F  +      +D +      
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM------IDER------ 439

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
                                  L P  + YN +I  LC   + DKA+D FL
Sbjct: 440 -----------------------LSPGNIVYNSLIHSLCIFDKWDKAKDYFL 468



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 167/338 (49%), Gaps = 3/338 (0%)

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + + P++ TY  LI   C A   +        ++ +G +   + F  ++  LC +++  +
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 296 ASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNI 352
           A  + L  M Q G  PN  +YN L+ G C   +   A EL   M   G  C  D VSY  
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +ING+ K  ++++A   Y EM+ +GI P VVTY+++   L +   ++ A+++   M ++G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  + RTY + + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F S+    L P + TY  ++QG    G + +   L   M  N   P+   F +LI  +
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +  +  +   +  KM+++ + PD      V+ +L K+
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 185/391 (47%), Gaps = 17/391 (4%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCK 219
           PN+ TY  LI   C  G     L+L      G   +G V K     + + ++ ++ GLC 
Sbjct: 89  PNLCTYGILIGSCCCAGR----LDL------GFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 220 EGFVDKAKALFLQ-MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPS 276
           +     A  + L+ M      P+V +YN L+ GLC  N   EA  L   M D G    P 
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VV++  +++   K   +D+A      M+ RG+ PN  TY++++   C    +++A E+  
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           SM   G   +  +YN +++GYC + + +EA+   ++M S G++P VVTYN+L   L +  
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +   A K+FD M + G+  +  TY T + G    G ++E   L   +       +   ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI    K G++  A  +F  +    L P+ VTY  +I  LC  G+++ A   F  M + 
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             +P  I ++ LIH     ++  K  +   K
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 173/375 (46%), Gaps = 8/375 (2%)

Query: 185 ALNLFEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           A++ +  MA  G  E+     PN  TY  +I   C  G +D   A    +  +    D +
Sbjct: 72  AVSRYNRMARAGADEV----TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAI 127

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            +  L+ GLC     ++A  + +  M Q G  P+V ++N+++  LC   +  EA  LL +
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 303 MVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           M   G    P+  +Y T+++GF   G +++A   +  M   G   + V+Y+ +I   CK 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           + +++A+ +   MV  G+ P   TYN++  G     Q + A+    +M  DGV  D  TY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            + +D LCKNG   EA ++F ++     + +I  Y  L+ G    G L     L   +  
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PN   ++I+I      G++D+A  +F  M +    PD +T+  +I    +      
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED 427

Query: 541 VNELLHKMKEKKVMP 555
                 +M ++++ P
Sbjct: 428 AMRYFEQMIDERLSP 442



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 45/267 (16%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATG 91
           +EGD++     +A+  +  ML      P V +++ ++A+L K +  D      T +   G
Sbjct: 211 KEGDLD-----KAYGTYHEMLD-RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 92  LFPNLYTYNILINCFCKIG--RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           + PN  TYN +++ +C  G  + ++GF+   ++      P+  T+NSL+  L    R  E
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLK--KMHSDGVEPDVVTYNSLMDYLCKNGRCTE 322

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG------------- 195
           A  +F  +   G +P + TY TL+ G    G  +    L + M  NG             
Sbjct: 323 ARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 196 ----NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                G++                P+TVTY T+I  LCK G V+ A   F QM DE ++P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIE 267
             + YNSLIH LC  + W++AK  F++
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKDYFLK 469


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 254/510 (49%), Gaps = 21/510 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + + N L+  L K++ +         +   GL PN  TY ILI+  CK G +      
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCM 392

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+           +NSLI G        +A  L  ++   G  P+  +Y+ LI GLCR
Sbjct: 393 FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ L  EMA  NG  G     N  T++T+I G CK+G +D+A  LF +M D ++
Sbjct: 453 KGDLASAMELHREMAR-NGVSG-----NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VT+N +I G C   +  +A +L+ +M+D+G+ P   T+  ++  LC      +A  
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKE 566

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            +D +    V  N+ +  TLM GFC  G++     ++  M + G K D +S+ +++    
Sbjct: 567 FVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAAL 626

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE----HALKLFDEMQRDGVA 414
           K  + E+   L+REM  KG+KP     N     + ++H  E     AL  +D+M  DG +
Sbjct: 627 KLHDGEKISVLFREMKEKGVKPD----NVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  TYT  I+ LCK+GY+  A  L   + + +   +   YNC +D L   G L+ A  L
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
             ++  G L  N VT+N +I+G C  GQ+  A DL  +  E+   PD I++  +I+   +
Sbjct: 743 HATILEGCLA-NTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCK 801

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           + + +K  +L ++M  K + PD    +I++
Sbjct: 802 VGDINKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 158/521 (30%), Positives = 255/521 (48%), Gaps = 14/521 (2%)

Query: 55  DYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCK 108
           D ML +H   P V+S + ++  L K  H D        L   G+ PNL+  N LI+  CK
Sbjct: 289 DDMLSLH-FVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCK 347

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
             R       F  +      PN  T+  LI  L     + +A  +F +++  G    V  
Sbjct: 348 DRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYP 407

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN+LING C+  +   A  L  EM     E G+   P+  +YS +I GLC++G +  A  
Sbjct: 408 YNSLINGYCQHDNFHQARGLLNEMV----EKGLA--PSAASYSPLIAGLCRKGDLASAME 461

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L  +M    ++ +V T+ +LI G C   + +EA RLF +M+D  V P+ VTFNV+++  C
Sbjct: 462 LHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYC 521

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +   + +A +L D MV RG+ P+  TY +L+   CL     +A+E    +E+     +  
Sbjct: 522 RVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSF 581

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           S   L+ G+CK   + E   ++ EM ++G+K  ++++  +     ++H  E    LF EM
Sbjct: 582 SLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREM 641

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +  GV  D   +T  ID   K   I++A+  +  +    C  ++  Y  LI+ LCKSG L
Sbjct: 642 KEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYL 701

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A  L   +  G  +PN  TYN  +  L N+G+++KA+ L   + E   A + +TF+ L
Sbjct: 702 SSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLA-NTVTFNTL 760

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           I GF +  +     +L+    E    PD    S +++ L K
Sbjct: 761 IKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCK 801



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 246/486 (50%), Gaps = 7/486 (1%)

Query: 93  FP-NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           FP + Y Y   I  +C+I  +        R+       +A  +N L+ GL   +R++EA 
Sbjct: 191 FPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAV 250

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +   +   G   + +TY TL+ G CRT    +AL + ++M      + +   P+  + S
Sbjct: 251 EVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDM------LSLHFVPSVASCS 304

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            ++DGL K G +DKA  L   + +  + P++   N+LI  LC    + EA+RLF  M ++
Sbjct: 305 FMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANR 364

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G++P+ VT+ +++  LCK   MD+A  + D M ++G+R     YN+L++G+C     ++A
Sbjct: 365 GLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQA 424

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M   G      SY+ LI G C+  ++  A+ L+REM   G+   V T+ TL  G
Sbjct: 425 RGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISG 484

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +   ++ A +LFD+M    V  +  T+   I+G C+ G + +A +L+  +       D
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              Y  LI  LC +     A E    L +  +V N  +   ++ G C +G++ +   ++ 
Sbjct: 545 NYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWD 604

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +M       D+I+F ++++  +++++  K++ L  +MKEK V PD    + ++D+  K E
Sbjct: 605 EMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEE 664

Query: 572 ISLKSL 577
             +++L
Sbjct: 665 NIVQAL 670



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 35/383 (9%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T S I+  L K      A+ LF +M       D   Y + I   C   + + A+ L   M
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRM 221

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +GV+ S V +NV+M  LC+N ++ EA  + + MV+RG+  +  TY TL+ GFC   ++
Sbjct: 222 ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL 281

Query: 329 NRAEELFGSMESM-------GCK----------HDDVSY------------------NIL 353
             A E+   M S+        C           H D ++                  N L
Sbjct: 282 EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNAL 341

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+  CK++   EA  L+R M ++G++P  VTY  L   L +   ++ AL +FD M+  G+
Sbjct: 342 IDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGI 401

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
                 Y + I+G C++    +A  L   +          +Y+ LI GLC+ G L  A E
Sbjct: 402 RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAME 461

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   +    +  NV T+  +I G C DG MD+A  LF  M +++  P+ +TF+++I G+ 
Sbjct: 462 LHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYC 521

Query: 534 RINEPSKVNELLHKMKEKKVMPD 556
           R+    K  +L  +M ++ + PD
Sbjct: 522 RVGNVRKAFQLYDQMVDRGLTPD 544



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 83/429 (19%)

Query: 65  PPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +S++ L+A L      A        +   G+  N+YT+  LI+ FCK G +      
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL 497

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++ S   PN  TFN +I+G      + +A  L+ ++   G  P+  TY +LI+ LC 
Sbjct: 498 FDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCL 557

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           T   M A    +++ N           N+ + +T++ G CKEG + +   ++ +M+   +
Sbjct: 558 TLGAMKAKEFVDDLENN------CVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGV 611

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP----------------------- 275
             D++++  +++     +D  +   LF EM ++GV+P                       
Sbjct: 612 KLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALN 671

Query: 276 ------------SVVTFNVIMDELCKNRKMD----------------------------- 294
                       +VVT+ V+++ LCK+  +                              
Sbjct: 672 CWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLA 731

Query: 295 -----EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
                E +++L   +  G   N  T+NTL+ GFC  G+I  A +L  +    G   D +S
Sbjct: 732 NEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFDEM 408
           Y+ +IN  CK  ++ +A  L+ EM+ KG+KP +V YN L +    IH + +  L ++ +M
Sbjct: 792 YSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNIL-IRWCNIHGEFDKGLGIYSDM 850

Query: 409 QRDGVAADT 417
                A DT
Sbjct: 851 VNLKYADDT 859



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 94/229 (41%)

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K ++   A  L+ EMV          Y        EI  ++ A  L   M+  GV     
Sbjct: 172 KIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAV 231

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y   + GLC+N  ++EAVE+  ++       D   Y  L+ G C++  L+ A E+   +
Sbjct: 232 PYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDM 291

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                VP+V + + M+ GL   G +DKA  L   + E    P++   + LI    +    
Sbjct: 292 LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRF 351

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +   L   M  + + P+    +I++  L K  +   +L  F     +G
Sbjct: 352 REAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 257/493 (52%), Gaps = 22/493 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNIL 102
           A  +FD M R     P V  +N+++    K        + ++  L    +FP++ +YN++
Sbjct: 202 ALEVFDEM-RERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVM 260

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK GR S G   + R+ ++    +  T+++LI GL     +  A  ++ ++   G 
Sbjct: 261 ISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV 320

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V+T N ++NGLC+ G+      L+EEM       G     N  +Y+  + GL + G 
Sbjct: 321 RPDVVTCNAMLNGLCKAGNVEECFELWEEM-------GKCSLRNVRSYNIFLKGLFENGK 373

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF--IEMMDQGVQPSVVTF 280
           VD A  L+    D  +  D  TY  ++HGLC     N A ++    E  + G+      +
Sbjct: 374 VDDAMMLW----DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAY 429

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + +++ LCK  ++DEA  +++LM +RG + N+   N L+DGF    K++ A ++F  M  
Sbjct: 430 SSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSG 489

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC    VSYNILING  + +   EA     EM+ KG KP ++TY+TL  GL+E + ++ 
Sbjct: 490 KGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDA 549

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL+L+ +    G   D   Y   I  LC +G + +A++L+ TLR  KC +++  +N +++
Sbjct: 550 ALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIME 608

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G  K G  + A +++  +    L P++++YNI ++GLC+ G++  A     D       P
Sbjct: 609 GFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLP 668

Query: 521 DVITFDMLIHGFI 533
             IT+++L+   I
Sbjct: 669 TAITWNILVRAVI 681



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/599 (26%), Positives = 276/599 (46%), Gaps = 87/599 (14%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYN 100
           PNEA  +F  M  +    P + SFN LL +  ++  +    N      A  + PN+ TYN
Sbjct: 93  PNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYN 152

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +L+   CK G    G      +  +  +P+  T+ +LI G+     +  A  +F +++  
Sbjct: 153 VLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRER 212

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G EP+V+ YN +I+G  + G  + A  ++E +         +  P+ V+Y+ +I GLCK 
Sbjct: 213 GVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREE-----LVFPSVVSYNVMISGLCKC 267

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G   +   ++ +MK      D+ TY++LIHGL  A D   A++++ EM+ +GV+P VVT 
Sbjct: 268 GRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTC 327

Query: 281 NVIMDELCK----------------------------------NRKMDEASRLLDLMVQR 306
           N +++ LCK                                  N K+D+A  L D +++ 
Sbjct: 328 NAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLE- 386

Query: 307 GVRPNACTYNTLMDGFCLMGKINRA----------------------------------E 332
               ++ TY  ++ G C  G +NRA                                  +
Sbjct: 387 ---ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLD 443

Query: 333 ELFGSMESM---GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           E  G +E M   GCK +    N+LI+G+ K+ +++ A+ ++REM  KG   TVV+YN L 
Sbjct: 444 EADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILI 503

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    +   A    +EM   G   D  TY+T I GL ++  +  A+ L+        +
Sbjct: 504 NGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHK 563

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DI  YN +I  LC SG+++ A +L+ +L     V N+VT+N +++G    G  + A  +
Sbjct: 564 PDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKI 622

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +  + E+   PD+I++++ + G       +     L     +  +P A   +I+V  ++
Sbjct: 623 WAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVI 681



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 222/448 (49%), Gaps = 14/448 (3%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +P   +FN+L+       +   A   F   +A    PNV TYN L+  +C+ G       
Sbjct: 110 SPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRG 169

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L   M       G    P+ +TY T+I G+ K G +  A  +F +M++  + PDVV YN 
Sbjct: 170 LLTWM------WGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNM 223

Query: 248 LIHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +I G     D+ +A  ++  ++ ++ V PSVV++NV++  LCK  +  E   + + M + 
Sbjct: 224 IIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKN 283

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
             + +  TY+ L+ G    G +  A +++  M   G + D V+ N ++NG CK   VEE 
Sbjct: 284 ERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEEC 343

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L+ EM    ++  V +YN    GLFE  +V+ A+ L+D +    + AD+ TY   + G
Sbjct: 344 FELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHG 398

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQ--AYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           LC NGY+  A+++       +  +D+   AY+ LI+ LCK GRL  A  +   +      
Sbjct: 399 LCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCK 458

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            N    N++I G     ++D A  +F +M     +  V+++++LI+G +R     +  + 
Sbjct: 459 FNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDC 518

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           +++M EK   PD    S ++  L ++ +
Sbjct: 519 VNEMLEKGWKPDIITYSTLIGGLYESNM 546



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 225/456 (49%), Gaps = 22/456 (4%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           + R  F+P++A F+ +++ + A+  ++ A A    + A  C        TL+    +T  
Sbjct: 34  VRRPGFSPSSAVFHHILRRVAADPGLLLAHAPRI-IAAIHCPCPEDVPLTLLKAYAKTRM 92

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL++F+ M +  G     C P   +++T+++   +     +A+  F   +   ++P+
Sbjct: 93  PNEALHVFQTMPHVFG-----CSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPN 147

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V TYN L+  +C   ++ + + L   M   G+ P  +T+  ++  + K+  +  A  + D
Sbjct: 148 VETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFD 207

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD-VSYNILINGYCKN 360
            M +RGV P+   YN ++DGF   G   +A E++  +          VSYN++I+G CK 
Sbjct: 208 EMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKC 267

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
               E L ++  M     K  + TY+ L  GL E   +  A K+++EM   GV  D  T 
Sbjct: 268 GRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTC 327

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
              ++GLCK G + E  EL+  +   KC L ++++YN  + GL ++G++  A  L+    
Sbjct: 328 NAMLNGLCKAGNVEECFELWEEMG--KCSLRNVRSYNIFLKGLFENGKVDDAMMLW---- 381

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV--ITFDMLIHGFI---R 534
            G+L  +  TY +++ GLC +G +++A  +  + E      DV    +  LI+      R
Sbjct: 382 DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGR 441

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           ++E   V EL++K   +    ++ + ++++D  VK+
Sbjct: 442 LDEADGVVELMNK---RGCKFNSHVCNVLIDGFVKH 474


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/441 (33%), Positives = 226/441 (51%), Gaps = 9/441 (2%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFT-KLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           N  T N L++ L    R  +A  +F  +L    C+ N ITYNTLI G C+ G    A  L
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             EM            P+ VT+S+I+  LC  G + +A   F +  +    PD V +N L
Sbjct: 128 LAEMKERGH------SPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNIL 179

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           +HGLC AN  +EA+++  EM ++G+ P VVT+N ++D LCK+ +M+EA +LL+ MV+R V
Sbjct: 180 VHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV 239

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
           RPN  TYNTL+ G+C  G    A +L   M   G   D V++N LI+G+C+  ++++A  
Sbjct: 240 RPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACE 299

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           +   M      P +VTYN L  GL +  +   A +L  EM   G+  D  TY + I   C
Sbjct: 300 VLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           +N  I +A ++   +       D  +Y  L   L KS R   A+ L  ++     +PN+ 
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLF 419

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           T+N +++GLC   ++D+AR L   M      P   T+++L+ G  +        E+L  M
Sbjct: 420 TFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMM 479

Query: 549 KEKKVMPDASIVSIVVDLLVK 569
             + + P  S    +V  L +
Sbjct: 480 VSEGIQPLVSSSGTIVHTLAR 500



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 246/501 (49%), Gaps = 24/501 (4%)

Query: 54  FDYMLRMHPSPPPVSSF--NILLASLAKNKHYDT-------RLNATGLFPNLYTYNILIN 104
           F ++ R H      ++F  N LL +L K + +          L       N  TYN LI 
Sbjct: 54  FRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIG 113

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
            FCK G +   F     +     +P+  T +S+++ L     +  A   F +  +  C P
Sbjct: 114 GFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAP 171

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           + + +N L++GLC+      A  + EEM+    E G+V  P+ VTY+++IDGLCK   ++
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEMS----ERGIV--PDVVTYNSLIDGLCKSYRME 225

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A+ L   M    + P++VTYN+LI+G C       A +L   M+  G  P VVTFN ++
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              C+  K+D+A  +L LM +    PN  TYN L+ G C  G+ N A EL   M+  G  
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D ++YN LI  +C+N ++E+A  +   MV +G+ P  ++Y TL + L +  + + A  L
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            D M   G   +  T+ + ++GLC +  + EA  L   +R + C+     Y  L+ GLCK
Sbjct: 406 LDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK 465

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF---LDMEENAAAPD 521
           +GR+  A E+   +    + P V +   ++  L  +G+ D A   F   +  E  A  P 
Sbjct: 466 AGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDP- 524

Query: 522 VITFDMLIHGFIRINEPSKVN 542
             ++  L+  F+++    K N
Sbjct: 525 --SYQKLLE-FVKVLREGKSN 542



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 181/329 (55%), Gaps = 3/329 (0%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFI-EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           T N L+  L  A   ++A ++F  E++ Q    + +T+N ++   CK   M+ A +LL  
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +RG  P+  T+++++   C  G ++RA + F   ES+ C  D V +NIL++G CK  +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF--RESVECAPDSVLFNILVHGLCKANQ 188

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           + EA  +  EM  +GI P VVTYN+L  GL + +++E A +L + M +  V  +  TY T
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I G CK G    A +L   +       D+  +N LI G C+  ++  A E+   +  G+
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             PN+VTYN++I GLC+ G+ ++A +L  +M+     PD+IT++ LI  F R  +  +  
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++ + M E+ V+PD      +   L+K+E
Sbjct: 369 QIQNLMVERGVIPDGISYCTLAVALLKSE 397


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 244/507 (48%), Gaps = 10/507 (1%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFP--NLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
            N  L +LA+++      +     P  NL TY  LIN +C  G +         +LR+ F
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGF 103

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
            P++  + S + G      +  A  LF  +   GC     TY  L++GLC  G    A++
Sbjct: 104 APDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMS 163

Query: 188 LFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +F  M A+G       C P+   Y+T++ GLC  G   +A+ L      E   P+VV YN
Sbjct: 164 VFAGMQADG-------CAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYN 216

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LI G C+  D   A  +F  M   G  P+V T+  ++   CK+RK+D A  L   MV  
Sbjct: 217 ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDA 276

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ PN  TY  L+ G C  G+++ A  L  SME+ G   ++ + ++LI+  CK++ V EA
Sbjct: 277 GLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEA 336

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L   ++ KGIK   + Y +L  GL +  +   A +L   +   G   D  TY++ IDG
Sbjct: 337 QLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDG 396

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC+   + EA+ +   +     +     Y  +ID L +      + ++   +    + P+
Sbjct: 397 LCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V TY I ++  C++G+M+ A  + L M ++   P+++T++ LI G+  +   S+      
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFK 516

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEIS 573
            M      P+    ++++ LL+K E S
Sbjct: 517 HMVANGCKPNEESYTVLLRLLIKKESS 543



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 249/548 (45%), Gaps = 48/548 (8%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P P   ++    L    + +  +T L+   A G  PN+  YN LI+ +C +G + L    
Sbjct: 175 PDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDV 234

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+  +  +PN  T+  LI G     ++  A  LF+++   G  PNV+TY  LI G C 
Sbjct: 235 FERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCS 294

Query: 179 TGHTMIALNLFEEMANGN---------------------GEIGVV--------CKPNTVT 209
            G    A  L + M N                       GE  ++         K N + 
Sbjct: 295 DGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIV 354

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+++IDGLCK G    A  L   +  +   PD  TY+SLI GLC   + +EA  +  +MM
Sbjct: 355 YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMM 414

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           ++GVQPS VT+ +I+DEL +    D + ++LD M+  G++P+  TY   +  +C  G++ 
Sbjct: 415 EKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRME 474

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            AE +   M   G   + V+YN LI GY       +A S ++ MV+ G KP   +Y  L 
Sbjct: 475 DAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534

Query: 390 ----------------LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
                           + +++I ++++   L +EM +  + ++   Y  F+  LC+   +
Sbjct: 535 RLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRL 594

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA  L   ++          Y  +I   C+   L  A     S+     +P + +Y  +
Sbjct: 595 DEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHI 654

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I  LC +G +  A+ +F DM       + I + +LI G ++    ++ + LL  M+EK  
Sbjct: 655 ISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNY 714

Query: 554 MPDASIVS 561
            P  ++ +
Sbjct: 715 RPSDALYA 722



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 152/364 (41%), Gaps = 66/364 (18%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  + D M+     P PV+ + I++  L +    D       ++ A G+ P+++TY I
Sbjct: 404 SEAMLVLDDMMEKGVQPSPVT-YTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTI 462

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +  +C                                    E R+ +A  +   +   G
Sbjct: 463 FVRSYCH-----------------------------------EGRMEDAEHMMLHMVDHG 487

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
             PN++TYN LI G    G T  A + F+ M ANG       CKPN  +Y+ ++  L K+
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG-------CKPNEESYTVLLRLLIKK 540

Query: 221 GFVDKAKA----------------LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
              +   A                L  +M    +  ++  YN  +  LC  +  +EAK L
Sbjct: 541 ESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKIL 600

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
            IEM    + PS   +  I+   C+ + + EA   +D MV+ G  P   +Y  ++   C 
Sbjct: 601 LIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCE 660

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G I  A+++FG M S    ++++++ ILI+G  +   V E  SL   M  K  +P+   
Sbjct: 661 EGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDAL 720

Query: 385 YNTL 388
           Y  L
Sbjct: 721 YARL 724



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 105/291 (36%), Gaps = 63/291 (21%)

Query: 65  PPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ I + S      +   +H    +   G+ PNL TYN LI  +  +G  S  F  
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 119 FGRILRSCFTPNAATFNSLIK----------------------------GLHAE------ 144
           F  ++ +   PN  ++  L++                            GL  E      
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQL 574

Query: 145 -----------------SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
                             R+ EA  L  ++++    P+   Y ++I   CR      AL 
Sbjct: 575 PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALT 634

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
             + M   +G I     P   +Y  II  LC+EG +  AK +F  M  +  N + + +  
Sbjct: 635 FVDSMVK-SGYI-----PQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRI 688

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           LI GL       E   L   M ++  +PS   +  +  ++     + E +R
Sbjct: 689 LIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 262/531 (49%), Gaps = 15/531 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EA+  F  +LR       + + N L+ SL +    +        ++ +G+  N+YT NI+
Sbjct: 173 EAYEAFT-LLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIM 231

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N  CK G++         +      P+  T+N+LI    ++  + EA  L   + + G 
Sbjct: 232 VNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGF 291

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P V TYNT+INGLC+ G    A  +F EM            P++ TY +++   CK+G 
Sbjct: 292 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGD 345

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             + + +F  M+  ++ PD+V ++S++     + + ++A   F  + + G+ P  V + +
Sbjct: 346 AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 405

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++   C+   + EA  L + M+Q+G   +  TYNT++ G C    +  A++LF  M   G
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D  +  ILI+G+CK   ++ A+ L+++M  K IK  VVTYNTL  G  ++  ++ A 
Sbjct: 466 LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAK 525

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +++ +M    +     +++  ++ LC  G++ EA  ++  +     +  +   N +I G 
Sbjct: 526 EIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGY 585

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA--P 520
           C+SG           +     VP+ ++YN +I G   +  M KA  L   MEE      P
Sbjct: 586 CRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVP 645

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           DV T++ ++HGF R N+  +   +L KM E+ V PD S  + +++  V  +
Sbjct: 646 DVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQD 696



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 249/490 (50%), Gaps = 7/490 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++LI  F +  ++   + AF  +    +T +    N+LI  L     +  A  ++ ++ 
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G   NV T N ++N LC+ G          E+     E GV   P+ VTY+T+I    
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQ----EKGVY--PDIVTYNTLISAYS 271

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            +G +++A  L   M  +  +P V TYN++I+GLC    +  AK +F EM+  G+ P   
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+  ++ E CK     E   +   M  R V P+   ++++M  F   G +++A   F S+
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +  G   D+V Y ILI GYC+   + EA++L  EM+ +G    VVTYNT+  GL +   +
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A KLF+EM   G+  D+ T T  IDG CK G +  A+ELF+ ++  + +LD+  YN L
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +DG  K G +  A E++  +    ++P  ++++I++  LC+ G + +A  ++ +M   + 
Sbjct: 512 LDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSI 571

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            P V+  + +I G+ R    S     L KM  +  +PD    + ++   VK E   K+  
Sbjct: 572 KPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFG 631

Query: 579 SF-LVQERQG 587
               ++E+QG
Sbjct: 632 LVKKMEEKQG 641



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 252/499 (50%), Gaps = 16/499 (3%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L K+   +      + +   G++P++ TYN LI+ +   G +   F    
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +    F+P   T+N++I GL    +   A  +F ++   G  P+  TY +L+   C+ G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
             +   N+F +M + +    VV  P+ V +S+++    + G +DKA   F  +K+  + P
Sbjct: 345 DAVETENIFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 398

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI G C     +EA  L  EM+ QG    VVT+N I+  LCK + + EA +L 
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 458

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M +RG+ P++ T   L+DG C +G +  A ELF  M+    K D V+YN L++G+ K 
Sbjct: 459 NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++ A  ++ +MVSK I PT ++++ L   L     +  A +++DEM    +       
Sbjct: 519 GDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMIC 578

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSL- 478
            + I G C++G   +  E+F    I +  + D  +YN LI G  K   +  A+ L   + 
Sbjct: 579 NSMIKGYCRSGNASDG-EIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKME 637

Query: 479 -PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
              G LVP+V TYN ++ G C + QM +A  +   M E    PD  T+  LI+GF+  + 
Sbjct: 638 EKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDN 697

Query: 538 PSKVNELLHKMKEKKVMPD 556
            ++      +M ++   PD
Sbjct: 698 LTEAFRFHDEMLQRGFSPD 716



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 184/401 (45%), Gaps = 37/401 (9%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE-A 261
           C  N   +  +I    +   + +A   F  ++ +     +   N+LI  L     W E A
Sbjct: 151 CGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIG-WVELA 209

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            R++ E+   GV  +V T N++++ LCK+ KM++    L  + ++GV P+  TYNTL+  
Sbjct: 210 WRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISA 269

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +   G +  A EL  +M S G      +YN +ING CK+ + E A  ++ EM+  G+ P 
Sbjct: 270 YSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 329

Query: 382 VVTYNTLF----------------------------------LGLF-EIHQVEHALKLFD 406
             TY +L                                   + LF     ++ AL  F+
Sbjct: 330 STTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            ++  G+  D   YT  I G C+ G I EA+ L   +    C +D+  YN ++ GLCK  
Sbjct: 390 SVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 449

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            L  A +LF  +    L P+  T  I+I G C  G +  A +LF  M+E     DV+T++
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYN 509

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            L+ GF ++ +     E+   M  K+++P     SI+V+ L
Sbjct: 510 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 177/346 (51%), Gaps = 8/346 (2%)

Query: 75  ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
            +L K   Y   +   GL P+   Y ILI  +C+ G +S        +L+     +  T+
Sbjct: 379 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTY 438

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N+++ GL     + EA  LF ++   G  P+  T   LI+G C+ G+   A+ LF++M  
Sbjct: 439 NTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKE 498

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                    K + VTY+T++DG  K G +D AK ++  M  + I P  ++++ L++ LC 
Sbjct: 499 KR------IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCS 552

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
               +EA R++ EM+ + ++P+V+  N ++   C++    +    L+ M+  G  P+  +
Sbjct: 553 KGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCIS 612

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESM--GCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
           YNTL+ GF     +++A  L   ME    G   D  +YN +++G+C+  +++EA ++ R+
Sbjct: 613 YNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRK 672

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           M+ +G+ P   TY +L  G      +  A +  DEM + G + D +
Sbjct: 673 MIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 258/516 (50%), Gaps = 17/516 (3%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK 81
           R + S + + F+ L  R GD   +     + +F  ++R  P P   +   I+L    K  
Sbjct: 18  RPSASGVAILFK-LLLRVGDYGNV-----WKLFKDVIRRGPQPCKYTFSGIILGFCRKGC 71

Query: 82  HY--DTRLNATGLF---PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
            +  ++ L+    F   PN + YNI+IN  C  GR S     F  ++     P   TFN+
Sbjct: 72  IHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNT 131

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           +I     E  ++EA  LF  LK  G  PN I YNTL+NG  +      A  L+EEM    
Sbjct: 132 VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR--- 188

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            + G+   P+ +T++ ++ G  K G  +    L   +    + PD   ++  + GLC A 
Sbjct: 189 -KKGIA--PDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAG 245

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +EA    ++M+++G+ PS++ FN ++    +    D+A     LMV  G+ P+  T +
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 305

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +L+ G  + G++  A EL G M   G   +++++ +L++ + K  +V  A SL+ EM  +
Sbjct: 306 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           GI P VV ++    GL +   VE A  +F EM R G+  +   Y + I G CK G + EA
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           ++L + +R      DI   N +I GLCK GR++ A  +F  +    L P+++TYN +I G
Sbjct: 426 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 485

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            C    M  A +L   M  + + PD+ T+++ IHGF
Sbjct: 486 YCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 521



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 250/516 (48%), Gaps = 45/516 (8%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G+ P+     IL     ++G     +  F  ++R    P   TF+ +I G   + 
Sbjct: 11  RMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKG 70

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            I    +L   +  F CEPN   YN +IN  C  G T  AL  F  M      I   C P
Sbjct: 71  CIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM------IERGCNP 124

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             VT++T+I+  CKEG V +A+ LF  +K+   +P+ + YN+L++G     + ++A  L+
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  +G+ P  +TFN+++    K  + ++  RLL  +   G+ P+   ++  + G C  
Sbjct: 185 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 244

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+++ A E    M   G     +++N +I  Y +    ++A   Y+ MV  G+ P+  T 
Sbjct: 245 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 304

Query: 386 NTLFLGL-----------------------------------FEIHQVEHALKLFDEMQR 410
           ++L +GL                                   F+   V  A  L+ EM+R
Sbjct: 305 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 364

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRL 468
            G+  D   ++ FIDGL K G + EA  +F  L +L+  L  +  AYN LI G CK G+L
Sbjct: 365 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVF--LEMLRKGLIPNNFAYNSLICGFCKCGKL 422

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A +L   + H  L+P++ T N++I GLC  G+M  A ++F+DM +   +PD+IT++ L
Sbjct: 423 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           I+G+ +  +    + L+++M      PD +  +I +
Sbjct: 483 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 518



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 200/441 (45%), Gaps = 26/441 (5%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPN---EAFC----------IFDYMLRMHPSPPPVS 68
           R   S  L  F  +  R  +  V+T N    AFC          +FD +  M  SP  + 
Sbjct: 104 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 163

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
            +N L+    K +  D        +   G+ P+  T+NIL++   K GR   G      I
Sbjct: 164 -YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 222

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P+ + F+  + GL    R+ EA      +   G  P++I +N++I    + G  
Sbjct: 223 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A   ++ M +     G+   P+T   S+++ GL   G + +A  L  QM ++ ++ + 
Sbjct: 283 DKAFEAYKLMVH----FGLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLSVNN 336

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           + +  L+       D   A+ L+ EM  +G+ P VV F+  +D L K   ++EA  +   
Sbjct: 337 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 396

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+++G+ PN   YN+L+ GFC  GK+N A +L   M   G   D  + N++I G CK   
Sbjct: 397 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 456

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  A++++ +M   G+ P ++TYNTL  G  +   + +A  L + M   G   D  TY  
Sbjct: 457 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 516

Query: 423 FIDGLCKNGYIIEAVELFRTL 443
            I G C +  +  AV +   L
Sbjct: 517 RIHGFCSSRRMNRAVLMLDEL 537



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 182/384 (47%), Gaps = 13/384 (3%)

Query: 36  TTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNA 89
           T   G + +   ++A  +++ M +   +P  ++ FNIL++   K    +        ++ 
Sbjct: 166 TLMNGYVKMREIDQANMLYEEMRKKGIAPDGIT-FNILVSGHYKYGREEDGDRLLKDISV 224

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            GL P+   ++I ++  C  GR+         +L    +P+   FNS+I          +
Sbjct: 225 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 284

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A   +  +  FG  P+  T ++L+ GL   G    A  L  +M      +      N + 
Sbjct: 285 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSV------NNMA 338

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++ ++D   K G V  A++L+ +M+   I PDVV +++ I GL       EA  +F+EM+
Sbjct: 339 FTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEML 398

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P+   +N ++   CK  K++EA +L  +M  RG+ P+  T N ++ G C  G++ 
Sbjct: 399 RKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMR 458

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  +F  M   G   D ++YN LINGYCK  ++  A +L   M + G  P + TYN   
Sbjct: 459 SAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 518

Query: 390 LGLFEIHQVEHALKLFDEMQRDGV 413
            G     ++  A+ + DE+   G+
Sbjct: 519 HGFCSSRRMNRAVLMLDELVSAGI 542


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/493 (30%), Positives = 249/493 (50%), Gaps = 13/493 (2%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P    F+ L + L +   ++      +++    +FP   + N L++ F ++G+       
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ +   P   T+N +I  +  E  I  A+ LF ++K  G  P+ +TYN++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     +  FEEM +      + C+P+ +TY+T+I+  CK G + K    F +MK   +
Sbjct: 181 VGRLDDTVYFFEEMKS------MSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VV+Y++L+   C  +   +A + +++M   G+ P+  T+  ++D  CK   + +A R
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFR 294

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L D M Q GV  N  TY  L+DG C + +I  AEELFG M + G   +  SY  LI+G+ 
Sbjct: 295 LADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFV 354

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K K ++ AL L  EM  +GIKP ++ Y T    L  + ++E A  + +EMQ  G+ A+T 
Sbjct: 355 KAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTF 414

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            YTT +D   K+    E + L   +  L  E+    +  LIDGLCK+  +  A + F  +
Sbjct: 415 IYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRI 474

Query: 479 PHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
            +   L  N   Y  MI GLC + Q++ A  LF  M +    PD   +  LI G ++   
Sbjct: 475 SNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGN 534

Query: 538 PSKVNELLHKMKE 550
             +   L  KM E
Sbjct: 535 VVQALALRDKMAE 547



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/473 (32%), Positives = 224/473 (47%), Gaps = 12/473 (2%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNIL--LASLAKN---KHYDTRLNATGLFPNLYTYNILI 103
           EA   F  M R    P   S   +L   A L K    K +   +   G  P ++TYNI+I
Sbjct: 81  EALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMI 140

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +C CK G +      F  +      P+  T+NS+I G     R+ +    F ++K+  CE
Sbjct: 141 DCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCE 200

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+VITYNTLIN  C+ G     L  F EM           KPN V+YST++D  CKE  +
Sbjct: 201 PDVITYNTLINCFCKFGKLPKGLEFFREMKQSG------LKPNVVSYSTLVDAFCKEDMM 254

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A   ++ M+   + P+  TY SL+   C   + ++A RL  EM   GV+ +VVT+  +
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTAL 314

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D LC   ++ EA  L   MV  GV PN  +Y  L+ GF     ++RA EL   M+  G 
Sbjct: 315 IDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGI 374

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           K D + Y   I   C  +++E A  +  EM  KGIK     Y TL    F+       L 
Sbjct: 375 KPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLH 434

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGL 462
           L +EM    +     T+   IDGLCKN  + +A++ F R       + +   Y  +IDGL
Sbjct: 435 LLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 494

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           CK  +++ A  LF  +    LVP+   Y  +I G    G + +A  L   M E
Sbjct: 495 CKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAE 547



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 199/370 (53%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC P    +  +   L +E   ++A   F +MK   + P   + N L+H        +  
Sbjct: 58  VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           KR F +M+  G +P+V T+N+++D +CK   ++ AS L + M  RG+ P+  TYN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G+++     F  M+SM C+ D ++YN LIN +CK  ++ + L  +REM   G+KP 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VV+Y+TL     +   ++ ALK + +M+R G+  +  TYT+ +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +  +  E ++  Y  LIDGLC   R+K A ELF  +    ++PN+ +Y  +I G     
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            MD+A +L  +M+     PD++ +   I     + +      ++++M+EK +  +  I +
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417

Query: 562 IVVDLLVKNE 571
            ++D   K+E
Sbjct: 418 TLMDAYFKSE 427



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 205/439 (46%), Gaps = 59/439 (13%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRL 87
           D   +EGDI       A  +F+ M +     P   ++N ++    K    D        +
Sbjct: 141 DCMCKEGDIEA-----ASGLFEEM-KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 88  NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI 147
            +    P++ TYN LINCFCK G++  G   F  + +S   PN  ++++L+     E  +
Sbjct: 195 KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMM 254

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
            +A   +  ++  G  PN  TY +L++  C+ G+   A  L +EM+    ++GV  + N 
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS----QVGV--EWNV 308

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+ +IDGLC    + +A+ LF +M    + P++ +Y +LIHG   A + + A  L  E
Sbjct: 309 VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD------- 320
           M  +G++P ++ +   +  LC   K++ A  +++ M ++G++ N   Y TLMD       
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428

Query: 321 ----------------------------GFCLMGKINRAEELFGSMES-MGCKHDDVSYN 351
                                       G C    +++A + FG + +  G + +   Y 
Sbjct: 429 PSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYT 488

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I+G CK  +VE A +L+ +M  KG+ P    Y +L  G  +   V  AL L D+M   
Sbjct: 489 AMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEI 548

Query: 412 GVAADTRTYTTFIDGLCKN 430
           GV +  R    F D LC+N
Sbjct: 549 GVESGAR----FGD-LCQN 562



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P    ++ LF  L E    E AL+ F +M+R  V   TR+    +    + G        
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F+ +     +  +  YN +ID +CK G ++ A  LF  +    L+P+ VTYN MI G   
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++D     F +M+  +  PDVIT++ LI+ F +  +  K  E   +MK+  + P+   
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
            S +VD   K ++  ++L  ++   R G V
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLV 270


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 260/534 (48%), Gaps = 22/534 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGL-----FP------NLY 97
           EA  +F+ ML  +     V S N+ L  L+K    D    AT +     FP      N+ 
Sbjct: 193 EARRVFEKMLN-YGLVLSVDSCNVYLTRLSK----DCYKTATAIIVFREFPEVGVCWNVA 247

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           +YNI+I+  C++GR+         +    +TP+  ++++++ G      + +   L   +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K  G +PN   Y ++I  LCR      A   F EM       G++  P+TV Y+T+IDG 
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGF 361

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G +  A   F +M   +I PDV+TY ++I G C   D  EA +LF EM  +G++P  
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VTF  +++  CK   M +A R+ + M+Q G  PN  TY TL+DG C  G ++ A EL   
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M  +G + +  +YN ++NG CK+  +EEA+ L  E  + G+    VTY TL     +  +
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A ++  EM   G+     T+   ++G C +G + +  +L   +       +   +N 
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L+   C    LK A  ++  +    + P+  TY  +++G C    M +A  LF +M+   
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +  V T+ +LI GF++  +  +  E+  +M+ + +  D  I     D   K +
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 241/500 (48%), Gaps = 10/500 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+Y   +  +C+    + +   I F          N A++N +I  +    RI EA  L 
Sbjct: 214 NVYLTRLSKDCY----KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             ++  G  P+VI+Y+T++NG CR G       L E M           KPN+  Y +II
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG------LKPNSYIYGSII 323

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
             LC+   + +A+  F +M  + I PD V Y +LI G C   D   A + F EM  + + 
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P V+T+  I+   C+   M EA +L   M  +G+ P++ T+  L++G+C  G +  A  +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M   GC  + V+Y  LI+G CK  +++ A  L  EM   G++P + TYN++  GL +
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              +E A+KL  E +  G+ ADT TYTT +D  CK+G + +A E+ + +     +  I  
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           +N L++G C  G L+   +L   +    + PN  T+N +++  C    +  A  ++ DM 
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
                PD  T++ L+ G  +     +   L  +MK K      S  S+++   +K +  L
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683

Query: 575 KSLPSFLVQERQGEVGESNV 594
           ++   F    R+G   +  +
Sbjct: 684 EAREVFDQMRREGLAADKEI 703



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 203/394 (51%), Gaps = 6/394 (1%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           +  LA+ +   + +   G+ P+   Y  LI+ FCK G +      F  +     TP+  T
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           + ++I G      ++EA  LF ++   G EP+ +T+  LING C+ GH   A  +   M 
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM- 447

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                I   C PN VTY+T+IDGLCKEG +D A  L  +M    + P++ TYNS+++GLC
Sbjct: 448 -----IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            + +  EA +L  E    G+    VT+  +MD  CK+ +MD+A  +L  M+ +G++P   
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T+N LM+GFCL G +   E+L   M + G   +  ++N L+  YC    ++ A ++Y++M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S+G+ P   TY  L  G  +   ++ A  LF EM+  G +    TY+  I G  K    
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           +EA E+F  +R      D + ++   D   K  R
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 36/293 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            +AF + ++M++   SP  V ++  L+  L K    D+       +   GL PN++TYN 
Sbjct: 438 KDAFRVHNHMIQAGCSPN-VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  CK G +       G    +    +  T+ +L+        + +A  +  ++   G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

Query: 162 CEPNVITYNTLINGLCRTG---------HTMIALNLFEEMANGNGEIGVVC--------- 203
            +P ++T+N L+NG C  G         + M+A  +       N  +   C         
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616

Query: 204 -----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       P+  TY  ++ G CK   + +A  LF +MK +  +  V TY+ LI G 
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
                + EA+ +F +M  +G+      F+   D   K ++ D     +D +++
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 233/470 (49%), Gaps = 14/470 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P++YTY ILI+ FCK G +      F  +LR   TPN  T+ SLI       +
Sbjct: 479 MKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARK 538

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG--NGEIGVVCK 204
           + +A  LF  +   G +PNV+TY  LI+G C+ G    A  ++  M     + +I +  K
Sbjct: 539 VFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFK 598

Query: 205 --------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                   PN +TY  ++DGLCK   V++A  L   M      P+ + Y++LI G C   
Sbjct: 599 LDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG 658

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
               A+ +F++M ++G  P++ T++ +++ L K +++D   ++L  M++    PN   Y 
Sbjct: 659 KLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYT 718

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++DG C +GK   A  L   ME +GC  + ++Y  +I+G+ K  ++E+ L LYR+M SK
Sbjct: 719 DMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSK 778

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  P  +TY  L         ++ A +L DEM++        +Y   I+G   N   I +
Sbjct: 779 GCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITS 836

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF--CSLPHGVLVPNVVTYNIMI 494
           + L   L   +       Y  LID   K+GRL+ A  L    S    + V N   Y  +I
Sbjct: 837 IGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLI 896

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           + L +  ++DKA +L+  M      P++ TF  LI G  R+ +  +  +L
Sbjct: 897 ESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 234/504 (46%), Gaps = 32/504 (6%)

Query: 86  RLNATGLFPNLYTYNILIN-CFCKIGRVSLGFIAFGRILRSCFT----PNAATFNSLIKG 140
           R+ +    PN+ TY IL++ C   +G+  LG     RIL    T    PN   FNSL+  
Sbjct: 297 RMRSISCIPNVVTYRILLSGC---LGKGQLGRCK--RILSMMMTEGCYPNREMFNSLVHA 351

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-- 198
                    A  LF K+   GC+P  + YN  I  +C +   +   +L E       E  
Sbjct: 352 YCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSIC-SNEELPGSDLLELAEKAYSEML 410

Query: 199 -IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
            +GVV   N V  S     LC  G  DKA  +  +M  +   PD  TY+ +I  LC A+ 
Sbjct: 411 DLGVVL--NKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASK 468

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             +A  LF EM   G+ PSV T+ +++D  CK   + +A    D M++    PN  TY +
Sbjct: 469 VEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV--- 374
           L+  +    K+  A +LF  M   G K + V+Y  LI+G+CK  ++++A  +Y  M    
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 375 -SKGIK------------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            S  I             P ++TY  L  GL + ++VE A +L D M  +G   +   Y 
Sbjct: 589 ESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDG CK G +  A E+F  +       ++  Y+ LI+ L K  RL    ++   +   
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              PNVV Y  MI GLC  G+ ++A  L L MEE    P+VIT+  +I GF +I +  + 
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
            EL   M  K   P+     ++++
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLIN 792



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 242/525 (46%), Gaps = 40/525 (7%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
           +N+ L  L + K +  + + T       TYN LI  F +  ++   F+    +  S F  
Sbjct: 186 WNVALEELGRLKDFGYKASPT-------TYNALIQVFLRADKLDTAFLVHREMSNSGFRM 238

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           +  T       L    R  +A +L  K +     P+ + YN +++GLC       A+++ 
Sbjct: 239 DGCTLGCFAYSLCKAGRCGDALSLLEKEEFV---PDTVFYNRMVSGLCEASLFQEAMDIL 295

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           + M +      + C PN VTY  ++ G   +G + + K +   M  E   P+   +NSL+
Sbjct: 296 DRMRS------ISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLV 349

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL------- 302
           H  C + D++ A +LF +M+  G QP  + +N+ +  +C N ++   S LL+L       
Sbjct: 350 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEEL-PGSDLLELAEKAYSE 408

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+  GV  N    +      C  GK ++A E+   M S G   DD +Y+ +I   C   +
Sbjct: 409 MLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASK 468

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           VE+A  L+ EM   GI P+V TY  L     +   ++ A   FDEM RD    +  TYT+
Sbjct: 469 VEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I    K   + +A +LF  + +   + ++  Y  LIDG CK+G++  A +++  +   +
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDI 588

Query: 483 L----------------VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                             PN++TY  ++ GLC   ++++A +L   M  N   P+ I +D
Sbjct: 589 ESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            LI GF +  +     E+  KM E+   P+    S +++ L K +
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEK 693



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 235/494 (47%), Gaps = 28/494 (5%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+   YN +++  C+            R+      PN  T+  L+ G   + ++     +
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
            + +   GC PN   +N+L++  C++     A  LF++M      I   C+P  + Y+  
Sbjct: 330 LSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKM------IKCGCQPGYLLYNIF 383

Query: 214 IDGLCK------EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           I  +C          ++ A+  + +M D  +  + V  ++    LC A  +++A  +  E
Sbjct: 384 IGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICE 443

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           MM +G  P   T++ ++  LC   K+++A  L + M + G+ P+  TY  L+D FC  G 
Sbjct: 444 MMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGL 503

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I +A   F  M    C  + V+Y  LI+ Y K ++V +A  L+  M+ +G KP VVTY  
Sbjct: 504 IQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTA 563

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTR----------------TYTTFIDGLCKNG 431
           L  G  +  Q++ A +++  MQ D  ++D                  TY   +DGLCK  
Sbjct: 564 LIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKAN 623

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EA EL  T+ +  CE +   Y+ LIDG CK+G+L+ A E+F  +      PN+ TY+
Sbjct: 624 RVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYS 683

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I  L  + ++D    +   M EN+  P+V+ +  +I G  ++ +  +   L+ KM+E 
Sbjct: 684 SLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEV 743

Query: 552 KVMPDASIVSIVVD 565
              P+    + ++D
Sbjct: 744 GCYPNVITYTAMID 757



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 179/444 (40%), Gaps = 79/444 (17%)

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFV-DKAKALFL-QMKDENINPDVVTYNSLIHGLCHA 255
           +IG    P  V Y+ +I+ LC      D+    FL Q++D++        N LI   C  
Sbjct: 126 QIGYSHTP--VVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRN 183

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT- 314
             WN A      + D G + S  T+N ++    +  K+D A  +   M   G R + CT 
Sbjct: 184 GMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTL 243

Query: 315 -------------------------------YNTLMDGFCLMGKINRAEELFGSMESMGC 343
                                          YN ++ G C       A ++   M S+ C
Sbjct: 244 GCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISC 303

Query: 344 KHDDVSYNILING-----------------------------------YCKNKEVEEALS 368
             + V+Y IL++G                                   YCK+++   A  
Sbjct: 304 IPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYK 363

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQ-------VEHALKLFDEMQRDGVAADTRTYT 421
           L+++M+  G +P  + YN +F+G    ++       +E A K + EM   GV  +    +
Sbjct: 364 LFKKMIKCGCQPGYLLYN-IFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVS 422

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            F   LC  G   +A E+   +       D   Y+ +I  LC + +++ A+ LF  +   
Sbjct: 423 NFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKN 482

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +VP+V TY I+I   C  G + +AR+ F +M  +   P+V+T+  LIH +++  +    
Sbjct: 483 GIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDA 542

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
           N+L   M  +   P+    + ++D
Sbjct: 543 NKLFEMMLLEGSKPNVVTYTALID 566



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 41/293 (13%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +++  G  PNLYTY+ LIN   K  R+ L      ++L +  TPN   +  +I GL    
Sbjct: 669 KMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVG 728

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +  EA  L  K++  GC PNVITY  +I+G  + G     L L+ +M +        C P
Sbjct: 729 KTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG------CAP 782

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL------------- 252
           N +TY  +I+  C  G +D+A  L  +MK       + +Y  +I G              
Sbjct: 783 NFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDE 842

Query: 253 CHANDWNEAKRLFIEMMDQGVQ-----------------PSVVTFN-----VIMDELCKN 290
              N+    + L+  ++D  ++                 PS+   N      +++ L   
Sbjct: 843 LSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHA 902

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
            K+D+A  L   M+ + V P   T+  L+ G   +GK   A +L  S+  M C
Sbjct: 903 SKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVC 955



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 41/279 (14%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +++ L+ SL K K  D      +++      PN+  Y  +I+  CK+G+    +  
Sbjct: 677 PNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRL 736

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++      PN  T+ ++I G     +I +   L+  + + GC PN ITY  LIN  C 
Sbjct: 737 MLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCS 796

Query: 179 TGHTMIALNLFEEMANG----------------NGE----IGVVCK-------PNTVTYS 211
           TG    A  L +EM                   N E    IG++ +       P    Y 
Sbjct: 797 TGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYR 856

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVT-----YNSLIHGLCHANDWNEAKRLFI 266
            +ID   K G ++ A  L  ++     +P +       Y SLI  L HA+  ++A  L+ 
Sbjct: 857 ILIDNFIKAGRLEGALNLLEEISS---SPSLAVANKYLYTSLIESLSHASKVDKAFELYA 913

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            M+++ V P + TF  ++  L +  K  EA +L D + Q
Sbjct: 914 SMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQ 952


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 238/464 (51%), Gaps = 6/464 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++ T+NILIN  C  GR  +       ++RS   P+ ATF +++  L  E  ++EA  L
Sbjct: 280 PDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKL 339

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  ++  G  PN   YNTL++G  +      A  L+EEM       GV   P+ VT++ +
Sbjct: 340 FDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRT----TGV--SPDCVTFNIL 393

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + G  K G ++ +  L   +    +  D   Y+ ++  LC A   +EA +L  E++++G+
Sbjct: 394 VWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGL 453

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             SVV FN ++    +    D+A     +MV+ G  P++ T N+L+ G C  G +  A  
Sbjct: 454 TLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARI 513

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M   G   + V+Y +L++GY K   +E A  L++EM  +GI P  V +  L  GL 
Sbjct: 514 LLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLS 573

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +   VE A ++F EM   G   +   Y + I GLC  G + EA++L + +R      D  
Sbjct: 574 KAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTF 633

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N +IDG C+ G++KFA E F  +    L+P++ T+NI+I G C    M  A ++   M
Sbjct: 634 TFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKM 693

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
                 PD+ T++  +HG+ R+ + ++   +L ++    ++PD 
Sbjct: 694 YSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDT 737



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 231/465 (49%), Gaps = 41/465 (8%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+  TFN++I G   + R++   +L   +  F C P+V+T+N LIN  C  G T +A++ 
Sbjct: 245 PSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDW 304

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              M     E      P+  T++TI+  LC+EG V +A+ LF  ++D  I P+   YN+L
Sbjct: 305 LHLMVRSGVE------PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTL 358

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           + G   A +  +A  L+ EM   GV P  VTFN+++    K  +++++ RLL  ++  G+
Sbjct: 359 MDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGL 418

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
             ++  Y+ ++   C  G+++ A +L   +   G     V++N LI  Y +    ++A  
Sbjct: 419 FLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFE 478

Query: 369 LYREMVSKGIKPTVVTYNTLFLGL-----------------------------------F 393
            YR MV  G  P+  T N+L +GL                                   F
Sbjct: 479 AYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYF 538

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +++ +E A  L+ EM+  G+  D   +T  IDGL K G + EA E+F  +  +    +  
Sbjct: 539 KMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNF 598

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           AYN LI GLC  GR+  A +L   +    L+ +  T+NI+I G C  GQM  A + FLDM
Sbjct: 599 AYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDM 658

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           +     PD+ TF++LI G+ +  +     E+++KM    + PD +
Sbjct: 659 QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDIT 703



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 210/435 (48%), Gaps = 6/435 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           LF  +   G  P+ +T+N +I G CR    ++  +L   M         +C P+ VT++ 
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPK------FMCSPDVVTFNI 287

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I+  C  G    A      M    + P V T+ +++H LC   +  EA++LF  + D G
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+   +N +MD   K R++ +AS L + M   GV P+  T+N L+ G    G+I  ++
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   +   G   D   Y+++++  C    ++EA+ L +E++ KG+  +VV +N+L    
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAY 467

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                 + A + +  M R G    + T  + + GLC+ G++ EA  L   +      ++ 
Sbjct: 468 SRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINK 527

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            AY  L+DG  K   L+ A  L+  +    + P+ V +  +I GL   G +++A ++FL+
Sbjct: 528 VAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLE 587

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M      P+   ++ LI G       ++  +L  +M++K ++ D    +I++D   +   
Sbjct: 588 MSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQ 647

Query: 573 SLKSLPSFLVQERQG 587
              ++ +FL  +R G
Sbjct: 648 MKFAIETFLDMQRIG 662



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 248/543 (45%), Gaps = 42/543 (7%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V++F  +L +L +        K +D  +   G+ PN   YN L++ + K   V+   +
Sbjct: 315 PSVATFTTILHALCREGNVVEARKLFDG-IQDMGIAPNAAIYNTLMDGYFKAREVAQASL 373

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  +  +  +P+  TFN L+ G +   RI ++  L   L   G   +   Y+ +++ LC
Sbjct: 374 LYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLC 433

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVC-----------------------------KPNTV 208
             G    A+ L +E+      + VV                               P++ 
Sbjct: 434 WAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSS 493

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T ++++ GLC++G++ +A+ L  +M ++    + V Y  L+ G    N+   A+ L+ EM
Sbjct: 494 TCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEM 553

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            ++G+ P  V F  ++D L K   ++EA  +   M   G  PN   YN+L+ G C  G++
Sbjct: 554 KERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRV 613

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A +L   M   G   D  ++NI+I+G+C+  +++ A+  + +M   G+ P + T+N L
Sbjct: 614 TEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNIL 673

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +   +  A ++ ++M   G+  D  TY T++ G C+   + +AV +   L     
Sbjct: 674 IGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGI 733

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D   YN ++ G+C S  L  A  L   L     +PNV+T N+++   C  G  +KA  
Sbjct: 734 VPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALI 792

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
               + E +   D I++ +L   +  + +     EL+    EK +  D  ++ I  D   
Sbjct: 793 WGQKLREISFGFDEISYRILDQAYCLMQDDV---ELVRGTYEKHLFMDF-LMYITFDYFS 848

Query: 569 KNE 571
           +N+
Sbjct: 849 RNK 851



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 193/407 (47%), Gaps = 6/407 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           E +    NTL+ G    G    AL +   M       GV  +P   + + ++  L + G 
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMR------GVGVRPGLSSITILLRLLLRIGD 227

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                 LF  M  +   P  +T+N++I G C  +     + L   M      P VVTFN+
Sbjct: 228 YGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++  C   +   A   L LMV+ GV P+  T+ T++   C  G +  A +LF  ++ MG
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              +   YN L++GY K +EV +A  LY EM + G+ P  VT+N L  G ++  ++E + 
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L  ++   G+  D+  Y   +  LC  G + EA++L + L      L + A+N LI   
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAY 467

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            ++G    A+E +  +      P+  T N ++ GLC  G + +AR L   M E     + 
Sbjct: 468 SRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINK 527

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + + +L+ G+ ++N       L  +MKE+ + PDA   + ++D L K
Sbjct: 528 VAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSK 574


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 246/466 (52%), Gaps = 6/466 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  ++  ++  I+ + K G ++   + + R+L    +PN  T+  LIKGL  + RI EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             ++ ++   G EP+++TY++LI+G C+ G+      L+E+M      I +   P+ V Y
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM------IKMGYPPDVVIY 464

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
             ++DGL K+G +  A    ++M  ++I  +VV +NSLI G C  N ++EA ++F  M  
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G++P V TF  +M       +++EA  L   M + G+ P+A  Y TL+D FC   K   
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
             +LF  M+      D    N++I+   K   +E+A   +  ++   ++P +VTYNT+  
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   + +++ A ++F+ ++      +T T T  I  LCKN  +  A+ +F  +     + 
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   Y CL+D   KS  ++ +++LF  +    + P++V+Y+I+I GLC  G++D+A ++F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               +    PDV+ + +LI G+ ++    +   L   M    V PD
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 161/566 (28%), Positives = 269/566 (47%), Gaps = 52/566 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYN- 100
           ++A  IF Y  ++    P  S + +L + +  ++      H+D +L   G+ P+  + + 
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFD-KLCRGGIEPSGVSAHG 221

Query: 101 -ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            +L   FCK G V+        ++   F     + N ++KGL  + +I  A+ L + +  
Sbjct: 222 FVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLD 279

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  PNV+T+ TLING C+ G    A +LF+ M     E      P+ + YST+IDG  K
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE------PDLIAYSTLIDGYFK 333

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G +     LF Q   + +  DVV ++S I     + D   A  ++  M+ QG+ P+VVT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + +++  LC++ ++ EA  +   +++RG+ P+  TY++L+DGFC  G +     L+  M 
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453

Query: 340 SMGCKHDDVSY-----------------------------------NILINGYCKNKEVE 364
            MG   D V Y                                   N LI+G+C+    +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EAL ++R M   GIKP V T+ T+        ++E AL LF  M + G+  D   Y T I
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D  CK+      ++LF  ++  K   DI   N +I  L K  R++ A + F +L  G + 
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++VTYN MI G C+  ++D+A  +F  ++     P+ +T  +LIH   + N+      +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKN 570
              M EK   P+A     ++D   K+
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKS 719



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 235/482 (48%), Gaps = 12/482 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+ T+  LIN FCK G +   F  F  + +    P+   +++LI G      +   
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNT 207
             LF++    G + +V+ +++ I+   ++G    A  +++ M         +C+   PN 
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM---------LCQGISPNV 391

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+ +I GLC++G + +A  ++ Q+    + P +VTY+SLI G C   +      L+ +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+  G  P VV + V++D L K   M  A R    M+ + +R N   +N+L+DG+C + +
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + A ++F  M   G K D  ++  ++        +EEAL L+  M   G++P  + Y T
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L     +  +    L+LFD MQR+ ++AD       I  L K   I +A + F  L   K
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E DI  YN +I G C   RL  A  +F  L      PN VT  I+I  LC +  MD A 
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +F  M E  + P+ +T+  L+  F +  +     +L  +M+EK + P     SI++D L
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751

Query: 568 VK 569
            K
Sbjct: 752 CK 753



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 223/469 (47%), Gaps = 8/469 (1%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+ C C+ G V      F    +        +   ++  L    R+   A  F KL   G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211

Query: 162 CEPN-VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            EP+ V  +  +++ L   G    AL+    +      +G+V      + + ++ GL  +
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV------SCNKVLKGLSVD 265

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             ++ A  L   + D    P+VVT+ +LI+G C   + + A  LF  M  +G++P ++ +
Sbjct: 266 Q-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++D   K   +    +L    + +GV+ +   +++ +D +   G +  A  ++  M  
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   + V+Y ILI G C++  + EA  +Y +++ +G++P++VTY++L  G  +   +  
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
              L+++M + G   D   Y   +DGL K G ++ A+     +      L++  +N LID
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G C+  R   A ++F  +    + P+V T+  +++    +G++++A  LF  M +    P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           D + +  LI  F +  +P+   +L   M+  K+  D ++ ++V+ LL K
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 215/467 (46%), Gaps = 48/467 (10%)

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-- 198
           L  ES    A   F   +  G +P   ++ T+ + L R G   +A  +F+EM    G+  
Sbjct: 77  LSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133

Query: 199 --IGVVCKPNTVTYST---IIDGLCKEGFVDKAKALFL---------------QMKDENI 238
             +G + +  ++       +++  C+ G VDKA  +F+               +M +  I
Sbjct: 134 NVLGSI-RDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192

Query: 239 NPD---------------------VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
             D                     V  +  ++  L    +  +A      +M++G +  +
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           V+ N ++  L  + +++ ASRLL L++  G  PN  T+ TL++GFC  G+++RA +LF  
Sbjct: 253 VSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME  G + D ++Y+ LI+GY K   +     L+ + + KG+K  VV +++      +   
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +  A  ++  M   G++ +  TYT  I GLC++G I EA  ++  +     E  I  Y+ 
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LIDG CK G L+  + L+  +      P+VV Y +++ GL   G M  A    + M   +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              +V+ F+ LI G+ R+N   +  ++   M    + PD +  + V+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 168/340 (49%), Gaps = 30/340 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFN-ILLASLAKNKHYDT-----RLNATGLFPNLYTYNI 101
           +EA  +F  M  ++   P V++F  ++  S+ + +  +      R+   GL P+   Y  
Sbjct: 513 DEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ FCK  + ++G   F  + R+  + + A  N +I  L    RI +A+  F  L    
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+++TYNT+I G C       A  +FE +            PNTVT + +I  LCK  
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKV------TPFGPNTVTLTILIHVLCKNN 685

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  +F  M ++   P+ VTY  L+     + D   + +LF EM ++G+ PS+V+++
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +I+D LCK  ++DEA+ +    +   + P+   Y  L+ G+C +G++  A  L+  M   
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLY---REMVSKGI 378
           G K DD+              ++ ALS Y   + ++SKG+
Sbjct: 806 GVKPDDL--------------LQRALSEYNPPKWLMSKGV 831



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 177/384 (46%), Gaps = 18/384 (4%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQM--------------KDENINPDVVTYNSLIHGLCH 254
           ++ TI   L + G  D A  +F +M              +D +++ DV  +  L+   C 
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCR 158

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
               ++A  +F+     GV     +   +++ L  + ++D  +   D + + G+ P+  +
Sbjct: 159 YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218

Query: 315 -YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            +  ++D     G++ +A +    +   G +   VS N ++ G   + ++E A  L   +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +  G  P VVT+ TL  G  +  +++ A  LF  M++ G+  D   Y+T IDG  K G +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
               +LF        +LD+  ++  ID   KSG L  A  ++  +    + PNVVTY I+
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I+GLC DG++ +A  ++  + +    P ++T+  LI GF +         L   M +   
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457

Query: 554 MPDASIVSIVVDLLVKNEISLKSL 577
            PD  I  ++VD L K  + L ++
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAM 481


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 162/537 (30%), Positives = 257/537 (47%), Gaps = 73/537 (13%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNIL 102
           A C+FD M +     P + S N LL++L +N         Y+ ++ A G+ P++++Y I+
Sbjct: 205 ALCVFDNMGKC-GRVPSLRSCNSLLSNLVQNGEAFKALLVYE-QMIALGILPDIFSYTIM 262

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +N +CK GRV   F     + RSC  PN  T+NSLI G  +   +  A  +   +   G 
Sbjct: 263 VNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGI 322

Query: 163 EPNVITYNTLINGLCRTGHT---------MIALNLF-EEMANG----------------- 195
             N  TY  LI G C+ G           M+  NLF +E   G                 
Sbjct: 323 PENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALR 382

Query: 196 --NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
             +  + V  K NTV  +++I+G CK G V+KA  + + MKD N+ PD   YN+L+ G C
Sbjct: 383 IRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFC 442

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
              D+ +A +L  EM ++GV  +VVT+N ++  L     ++ A  + +LM +RGV PN  
Sbjct: 443 KQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEV 502

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY TL+D F  +G  +RA  ++    S G       YN +I G+CK +++ +A  ++ +M
Sbjct: 503 TYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
              G  P  +TY TL  G  ++  +  ALKL D  +RDG+++ T                
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSST---------------- 606

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
                              + YN LI G+ +S  L+    L   + +  L PNVVTY  +
Sbjct: 607 -------------------EMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSL 647

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           I G C+ G MDKA + +  M +   AP++I    ++    R  +  + N +LH++ +
Sbjct: 648 IAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 232/459 (50%), Gaps = 6/459 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +++++  F + G        F  + +    P+  + NSL+  L       +A  ++ ++
Sbjct: 188 VFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQM 247

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
            A G  P++ +Y  ++N  C+ G    A N  +EM          C+PN VTY+++IDG 
Sbjct: 248 IALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS------CCEPNVVTYNSLIDGY 301

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
              G V  AK +   M ++ I  +  TY  LI G C      +A++L   MM++ +    
Sbjct: 302 VSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDE 361

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             + V++   C   ++D+A R+ D M++ G++ N    N+L++G+C +G +N+A E+  S
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+    K D   YN L++G+CK ++  +A  L  EM +KG+  TVVTYNTL   LF +  
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGH 481

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           VEHAL +++ M + GVA +  TY T +D   K G    A+ +++          I  YN 
Sbjct: 482 VEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNT 541

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I G CK  +L  A E+F  +      P+ +TY  +I G C  G + +A  L    E + 
Sbjct: 542 MICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDG 601

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            +     ++ LI G  R  E  K+N LL +MK +++ P+
Sbjct: 602 ISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 235/469 (50%), Gaps = 24/469 (5%)

Query: 67  VSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++N LL +L    H +  L+        G+ PN  TY  L++ F K+G      + + 
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
             L   FT +   +N++I G     ++++A  +F K+K  G  P+ ITY TLI+G C+ G
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           + + AL L ++M+  +G        +T  Y+++I G+ +   + K   L  +MK+  ++P
Sbjct: 586 NLVEALKL-KDMSERDG-----ISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +VVTY SLI G C     ++A   + +M+D+G+ P+++  + I+  L ++ K+DEA+ +L
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK------HDDVSYNILI 354
             +    + P A   +++     L     R  E    ++S G K       +++ YNI I
Sbjct: 700 HQIAD--IDPIAAHAHSVE----LPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAI 753

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G CK+K +++   +  +++ KG  P   TY +L      + +V  A  L D+M   G+ 
Sbjct: 754 TGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLV 813

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +   Y   I+GLCK+G +  A  LF  L        +  YN LIDG CK GR   A EL
Sbjct: 814 PNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALEL 873

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
              +    + P+ +TY+ +I GL  +G+ +++  L  +M +      V+
Sbjct: 874 KDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVM 922



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 207/442 (46%), Gaps = 12/442 (2%)

Query: 150 AAALFTKL----KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           A+A++ +L    + F   P V  ++ ++      G T  AL +F+ M    G+ G V  P
Sbjct: 168 ASAVWDELVSVYREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNM----GKCGRV--P 219

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  + ++++  L + G   KA  ++ QM    I PD+ +Y  +++  C     +EA    
Sbjct: 220 SLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFV 279

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM     +P+VVT+N ++D       +  A ++L LM ++G+  N+ TY  L+ G+C  
Sbjct: 280 KEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKR 339

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G++ +AE+L G M       D+  Y +LI+ YC    V++AL +   M+  G+K   V  
Sbjct: 340 GQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVIC 399

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N+L  G  ++  V  A ++   M+   +  D+  Y T +DG CK    I+A +L   +  
Sbjct: 400 NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHN 459

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                 +  YN L+  L   G ++ A  ++  +    + PN VTY  ++      G  D+
Sbjct: 460 KGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDR 519

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  ++ D         +  ++ +I GF ++ +  +  E+  KMKE    PD      ++D
Sbjct: 520 AMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLID 579

Query: 566 LLVKNEISLKSLPSFLVQERQG 587
              K    +++L    + ER G
Sbjct: 580 GYCKVGNLVEALKLKDMSERDG 601



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 154/342 (45%), Gaps = 19/342 (5%)

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM-------------DQGVQP-- 275
           L  K     PDV +Y  ++H L  A  + E +    E++             D+ V    
Sbjct: 121 LASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYR 180

Query: 276 ----SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
               S   F++I+    +      A  + D M + G  P+  + N+L+      G+  +A
Sbjct: 181 EFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKA 240

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             ++  M ++G   D  SY I++N YCK   V+EA +  +EM     +P VVTYN+L  G
Sbjct: 241 LLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDG 300

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
              +  V  A K+   M   G+  ++RTYT  I G CK G + +A +L   +      +D
Sbjct: 301 YVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVD 360

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              Y  LI   C +GR+  A  +  ++    L  N V  N +I G C  G ++KA ++ +
Sbjct: 361 EHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLV 420

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
            M++    PD   ++ L+ GF +  +  K  +L  +M  K V
Sbjct: 421 SMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV 462



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 44/312 (14%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN+ TY  LI  +C  G +   + A+ +++     PN    + ++  L+   +I EA 
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEAN 696

Query: 152 ALFTKLK-----------------------------AFGCEP------NVITYNTLINGL 176
            +  ++                              +FG +       N I YN  I GL
Sbjct: 697 LILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGL 756

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C++ +      +  ++      +   C P+  TY ++I      G V++A  L   M + 
Sbjct: 757 CKSKNIDDVRRILSDLL-----LKGFC-PDNYTYCSLIHACSAVGKVNEAFCLRDDMINA 810

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + P++V YN+LI+GLC + + + A+RLF ++  +G+ P+VVT+N ++D  CK  +  EA
Sbjct: 811 GLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEA 870

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L D M + G+ P++ TY+TL+ G  + GK  ++  L   M   G K   V   ++   
Sbjct: 871 LELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG-KGSSVMDPLVARA 929

Query: 357 YCK--NKEVEEA 366
           Y K  +K+ E A
Sbjct: 930 YVKWRDKQSESA 941



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 35/197 (17%)

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV--ELFRTLR-----------ILK-- 447
           K+   + R  +  + R Y   +  LCKN YI  AV  EL    R           ILK  
Sbjct: 137 KIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVF 196

Query: 448 ----------CELD----------IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
                     C  D          +++ N L+  L ++G    A  ++  +    ++P++
Sbjct: 197 AEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDI 256

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            +Y IM+   C +G++D+A +   +ME +   P+V+T++ LI G++ + +     ++L  
Sbjct: 257 FSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLAL 316

Query: 548 MKEKKVMPDASIVSIVV 564
           M EK +  ++   ++++
Sbjct: 317 MSEKGIPENSRTYTLLI 333


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 159/554 (28%), Positives = 265/554 (47%), Gaps = 54/554 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYN 100
           ++A  I+DY++ ++ S P V + N LL+ L K++        YD   +      N Y+  
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN-YSTC 209

Query: 101 ILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           IL+   C  G+V +G  +  GR  + C  PN   +N++I G      I  A  +F +LK 
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKL 268

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV----------------- 202
            G  P + T+ T+ING C+ G  + +  L  E+      + V                  
Sbjct: 269 KGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVD 328

Query: 203 ------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
                       CKP+  TY+ +I+ LCKEG  + A     +   + + P+ ++Y  LI 
Sbjct: 329 PAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQ 388

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
             C + +++ A +L ++M ++G +P +VT+ +++  L  +  MD+A  +   ++ RGV P
Sbjct: 389 AYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +A  YN LM G C  G+   A+ LF  M       D   Y  LI+G+ ++ + +EA  ++
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
              V KG+K  VV +N +  G      ++ AL   + M  + +  D  TY+T IDG  K 
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             +  A+++FR +   KC+ ++  Y  LI+G C  G  K A E F  +    LVPNVVTY
Sbjct: 569 QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628

Query: 491 NIMIQGLCNDGQ-MDKARDLFLDMEENAAAPDVITFDMLIHGFIR------INEPSKVN- 542
             +I+ L  +   ++KA   +  M  N   P+ +TF+ L+ GF++      + EP   N 
Sbjct: 629 TTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNH 688

Query: 543 -------ELLHKMK 549
                  E  H+MK
Sbjct: 689 GQSSLFSEFFHRMK 702



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 228/485 (47%), Gaps = 45/485 (9%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT--LINGLCRTGHTMIA 185
            P+    NSL+  L    R+ +A  ++ ++   G   +V  Y+T  L+ G+C  G   + 
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG--DSVDNYSTCILVKGMCNEGKVEVG 224

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
             L E      G  G  C PN V Y+TII G CK G ++ A  +F ++K +   P + T+
Sbjct: 225 RKLIE------GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGV-------------------------------- 273
            ++I+G C   D+  + RL  E+ ++G+                                
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338

Query: 274 ---QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
              +P V T+N++++ LCK  K + A   LD   ++G+ PN  +Y  L+  +C   + + 
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +L   M   GCK D V+Y ILI+G   +  +++A+++  +++ +G+ P    YN L  
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +   A  LF EM    +  D   Y T IDG  ++G   EA ++F        ++
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  +N +I G C+SG L  A      +    LVP+  TY+ +I G      M  A  +F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             ME+N   P+V+T+  LI+GF    +     E   +M+ + ++P+    + ++  L K 
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638

Query: 571 EISLK 575
             +L+
Sbjct: 639 SSTLE 643



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 202/425 (47%), Gaps = 12/425 (2%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST--IIDGLCKEG 221
           P+VI  N+L++ L ++     A  +++EM +    +          YST  ++ G+C EG
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVD--------NYSTCILVKGMCNEG 219

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V+  + L      +   P++V YN++I G C   D   A  +F E+  +G  P++ TF 
Sbjct: 220 KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG-KINRAEELFGSMES 340
            +++  CK      + RLL  + +RG+R +    N ++D     G K++ AE + G + +
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIA 338

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
             CK D  +YNILIN  CK  + E A+    E   KG+ P  ++Y  L     +  + + 
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A KL  +M   G   D  TY   I GL  +G++ +AV +   L       D   YN L+ 
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLCK+GR   A  LF  +    ++P+   Y  +I G    G  D+AR +F    E     
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           DV+  + +I GF R     +    +++M E+ ++PD    S ++D  VK +    ++  F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578

Query: 581 LVQER 585
              E+
Sbjct: 579 RYMEK 583



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 179/423 (42%), Gaps = 62/423 (14%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V+++NIL+  L K    +  +      +  GL PN  +Y  LI  +CK     +    
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++      P+  T+  LI GL     + +A  +  KL   G  P+   YN L++GLC+
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           TG  + A  LF EM + N        P+   Y+T+IDG  + G  D+A+ +F    ++ +
Sbjct: 463 TGRFLPAKLLFSEMLDRN------ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             DVV +N++I G C +   +EA      M ++ + P   T++ I+D   K + M  A +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M +   +PN  TY +L++GFC  G    AEE F  M+      + V+Y  LI    
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636

Query: 359 K-NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE----------------------- 394
           K +  +E+A+  +  M++    P  VT+N L  G  +                       
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696

Query: 395 -------------------------IH-QVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
                                    +H  V+ A    D+M + G + D  ++   + G C
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756

Query: 429 KNG 431
             G
Sbjct: 757 VVG 759


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 252/516 (48%), Gaps = 21/516 (4%)

Query: 67   VSSFNILLASLAKNKHYDTRLNATGL-----FP------NLYTYNILINCFCKIGRVSLG 115
            V S N+ L  L+K    D    AT +     FP      N+ +YNI+I+  C++GR+   
Sbjct: 653  VDSCNVYLTRLSK----DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 708

Query: 116  FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                  +    +TP+  ++++++ G      + +   L   +K  G +PN   Y ++I  
Sbjct: 709  HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 768

Query: 176  LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            LCR      A   F EM       G++  P+TV Y+T+IDG CK G +  A   F +M  
Sbjct: 769  LCRICKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 822

Query: 236  ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             +I PDV+TY ++I G C   D  EA +LF EM  +G++P  VTF  +++  CK   M +
Sbjct: 823  RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 882

Query: 296  ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            A R+ + M+Q G  PN  TY TL+DG C  G ++ A EL   M  +G + +  +YN ++N
Sbjct: 883  AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 942

Query: 356  GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            G CK+  +EEA+ L  E  + G+    VTY TL     +  +++ A ++  EM   G+  
Sbjct: 943  GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002

Query: 416  DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
               T+   ++G C +G + +  +L   +       +   +N L+   C    LK A  ++
Sbjct: 1003 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 1062

Query: 476  CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
              +    + P+  TY  +++G C    M +A  LF +M+    +  V T+ +LI GF++ 
Sbjct: 1063 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122

Query: 536  NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +  +  E+  +M+ + +  D  I     D   K +
Sbjct: 1123 KKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 1158



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 202/394 (51%), Gaps = 6/394 (1%)

Query: 74   LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
            +  LA+ +   + +   G+ P+   Y  LI+ FCK G +      F  +     TP+  T
Sbjct: 772  ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 831

Query: 134  FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
            + ++I G      ++EA  LF ++   G EP+ +T+  LING C+ GH   A  +   M 
Sbjct: 832  YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891

Query: 194  NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     C PN VTY+T+IDGLCKEG +D A  L  +M    + P++ TYNS+++GLC
Sbjct: 892  QAG------CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 945

Query: 254  HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             + +  EA +L  E    G+    VT+  +MD  CK+ +MD+A  +L  M+ +G++P   
Sbjct: 946  KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 1005

Query: 314  TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            T+N LM+GFCL G +   E+L   M + G   +  ++N L+  YC    ++ A ++Y++M
Sbjct: 1006 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 1065

Query: 374  VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             S+G+ P   TY  L  G  +   ++ A  LF EM+  G +    TY+  I G  K    
Sbjct: 1066 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 1125

Query: 434  IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
            +EA E+F  +R      D + ++   D   K  R
Sbjct: 1126 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 1159



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 241/500 (48%), Gaps = 10/500 (2%)

Query: 95   NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
            N+Y   +  +C+    + +   I F          N A++N +I  +    RI EA  L 
Sbjct: 657  NVYLTRLSKDCY----KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 712

Query: 155  TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
              ++  G  P+VI+Y+T++NG CR G       L E M           KPN+  Y +II
Sbjct: 713  LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG------LKPNSYIYGSII 766

Query: 215  DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
              LC+   + +A+  F +M  + I PD V Y +LI G C   D   A + F EM  + + 
Sbjct: 767  GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 826

Query: 275  PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            P V+T+  I+   C+   M EA +L   M  +G+ P++ T+  L++G+C  G +  A  +
Sbjct: 827  PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 886

Query: 335  FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
               M   GC  + V+Y  LI+G CK  +++ A  L  EM   G++P + TYN++  GL +
Sbjct: 887  HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 946

Query: 395  IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
               +E A+KL  E +  G+ ADT TYTT +D  CK+G + +A E+ + +     +  I  
Sbjct: 947  SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 1006

Query: 455  YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
            +N L++G C  G L+   +L   +    + PN  T+N +++  C    +  A  ++ DM 
Sbjct: 1007 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066

Query: 515  ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
                 PD  T++ L+ G  +     +   L  +MK K      S  S+++   +K +  L
Sbjct: 1067 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 1126

Query: 575  KSLPSFLVQERQGEVGESNV 594
            ++   F    R+G   +  +
Sbjct: 1127 EAREVFDQMRREGLAADKEI 1146



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 29/313 (9%)

Query: 91   GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
            GL P+  T+  LIN +CK G +   F     ++++  +PN  T+ +LI GL  E  +  A
Sbjct: 859  GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918

Query: 151  AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG-------------- 195
              L  ++   G +PN+ TYN+++NGLC++G+   A+ L  E  A G              
Sbjct: 919  NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978

Query: 196  ---NGE-----------IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
               +GE           +G   +P  VT++ +++G C  G ++  + L   M  + I P+
Sbjct: 979  YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038

Query: 242  VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              T+NSL+   C  N+   A  ++ +M  +GV P   T+  ++   CK R M EA  L  
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098

Query: 302  LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
             M  +G   +  TY+ L+ GF    K   A E+F  M   G   D   ++   +   K K
Sbjct: 1099 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 1158

Query: 362  EVEEALSLYREMV 374
              +  +    E++
Sbjct: 1159 RPDTIVDPIDEII 1171



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 36/293 (12%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
             +AF + ++M++   SP  V ++  L+  L K    D+       +   GL PN++TYN 
Sbjct: 881  KDAFRVHNHMIQAGCSPN-VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 939

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            ++N  CK G +       G    +    +  T+ +L+        + +A  +  ++   G
Sbjct: 940  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999

Query: 162  CEPNVITYNTLINGLCRTG---------HTMIALNLFEEMANGNGEIGVVC--------- 203
             +P ++T+N L+NG C  G         + M+A  +       N  +   C         
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 1059

Query: 204  -----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                        P+  TY  ++ G CK   + +A  LF +MK +  +  V TY+ LI G 
Sbjct: 1060 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119

Query: 253  CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
                 + EA+ +F +M  +G+      F+   D   K ++ D     +D +++
Sbjct: 1120 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 235/477 (49%), Gaps = 11/477 (2%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K +D  L+   + P+  +Y +++  +C++GR+S        ++   +  + AT   +I  
Sbjct: 214 KVFDEMLD-RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIST 272

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
              +  +  A   F K    G  PN+I +++LINGLC+ G    A  + EEM        
Sbjct: 273 FSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGW--- 329

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWN 259
              KPN  T++ +IDGLCK+G+ +KA  LFL++ + +N  P+V TY  +I+G C     N
Sbjct: 330 ---KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A+ L I M +QG+ P+  T+  ++D  CK      A  L+DLM + G  PN  TYN ++
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG C  G+   A +L       G   D V+Y ILI+ +C+  + ++AL+++  M   G++
Sbjct: 447 DGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQ 506

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P + TYN L        +VE + KLF+E    G+     TYT+ I G C++G+I  A++ 
Sbjct: 507 PDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKF 566

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  +R   C+ D   Y  LI GLC   +L  A +L+ ++    L P  VT   +    C 
Sbjct: 567 FHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCK 626

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            G    A  +   +E+      + T + LI       +        HK+ +K +  D
Sbjct: 627 QGDSATAMIILERLEKKLW---IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVD 680



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 189/424 (44%), Gaps = 46/424 (10%)

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++      G    A+N+  EM N     G+V K   + +  +ID     GFVD A+ +F 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNH----GLVLKARILNF--VIDVALALGFVDYAEKVFD 217

Query: 232 QMKDENINPDVVTYNSLIHGLCH------ANDW--------------------------- 258
           +M D  + PD  +Y  ++ G C        + W                           
Sbjct: 218 EMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKG 277

Query: 259 --NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             N A   F + +  G+ P+++ F+ +++ LCK   + +A  +L+ MV++G +PN  T+ 
Sbjct: 278 FVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHT 337

Query: 317 TLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
            L+DG C  G   +A  LF  +  S   K +  +Y  +INGYCK +++  A  L   M  
Sbjct: 338 ALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKE 397

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G+ P   TY  L  G  +      A +L D M ++G   +  TY   IDGLCK G   E
Sbjct: 398 QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPE 457

Query: 436 AVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
           A +L R  R LK  L  D   Y  LI   C+    K A  +F  +    L P++ TYN++
Sbjct: 458 AYKLLR--RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVL 515

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I   C   +++++  LF +       P   T+  +I G+ R    S   +  HKM++   
Sbjct: 516 IATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGC 575

Query: 554 MPDA 557
            PD+
Sbjct: 576 KPDS 579



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 151/305 (49%), Gaps = 1/305 (0%)

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A+++F EM+D+ V P   ++ +++   C+  ++ +  R L  M++RG   +  T   ++ 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            F   G +NRA   F     MG   + ++++ LING CK   +++A  +  EMV KG KP
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQR-DGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
            V T+  L  GL +    E A +LF ++ R D    +  TYT  I+G CK   +  A  L
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              ++      +   Y CLIDG CK+G    A+EL   +      PN+ TYN +I GLC 
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCK 451

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G+  +A  L     ++    D +T+ +LI  F R  +  +   +  +M +  + PD   
Sbjct: 452 KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHT 511

Query: 560 VSIVV 564
            ++++
Sbjct: 512 YNVLI 516



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 167/349 (47%), Gaps = 1/349 (0%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           + ++N++        ++          EA  + IEM + G+       N ++D       
Sbjct: 149 LNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D A ++ D M+ R V P++ +Y  ++ G+C MG+I+  +     M   G   D+ +  +
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I+ + +   V  A   +++ V  G+ P ++ +++L  GL +I  ++ A ++ +EM R G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
              +  T+T  IDGLCK G+  +A  LF + +R    + ++  Y C+I+G CK  +L  A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   +    LVPN  TY  +I G C  G   +A +L   M +    P++ T++ +I G
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDG 448

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             +     +  +LL +  +  +  D    +I++    +   + ++L  F
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIF 497



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 44/254 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N ++  L K   +        R   +GL  +  TY ILI+ FC+          
Sbjct: 437 PNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAI 496

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+ +    P+  T+N LI     + ++ E+  LF +    G  P   TY ++I G CR
Sbjct: 497 FSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCR 556

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            GH   A+  F +M +        CKP+++TY  +I GLC E  +D+A  L+  M D  +
Sbjct: 557 DGHISSAIKFFHKMRDYG------CKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610

Query: 239 NPDVVT--------------------------------YNSLIHGLCHANDWNEAKRLFI 266
           +P  VT                                 N+LI  LC       A   F 
Sbjct: 611 SPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFH 670

Query: 267 EMMDQGVQPSVVTF 280
           +++D+ +    +T 
Sbjct: 671 KLLDKDLNVDRITL 684



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 4/190 (2%)

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           EI +++ A+ +  EMQ  G+    R     ID     G++  A ++F  +       D  
Sbjct: 170 EIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDST 229

Query: 454 AYNCLIDGLCKSGRLKFA--WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +Y  ++ G C+ GR+     W L   +  G  V N  T  +MI      G +++A   F 
Sbjct: 230 SYKLMVVGYCRMGRISDVDRW-LKDMIERGYAVDNA-TCTLMISTFSEKGFVNRAFWYFK 287

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +    P++I F  LI+G  +I    +  E+L +M  K   P+    + ++D L K  
Sbjct: 288 KWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKG 347

Query: 572 ISLKSLPSFL 581
            + K+   FL
Sbjct: 348 WTEKAFRLFL 357


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 240/465 (51%), Gaps = 6/465 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  ++N L+  L    +I EA  L  +++  GC P+V++Y T+I+G C  G     + L 
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           +EM           KPN  TYS+II  LCK G V + + +  +M    + PD V Y +LI
Sbjct: 169 KEMQLKG------LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLI 222

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C   +   A +LF EM  + + P  + F+ ++  L  + K+ EA +L + M+++G  
Sbjct: 223 DGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE 282

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  TY  L+DG+C +G++ +A  L   M  +G   + V+Y  L +G CK+ E++ A  L
Sbjct: 283 PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANEL 342

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EM  KG++  + TYNT+  GL +   +  A+KL +EM+  G+  DT TYTT +D   K
Sbjct: 343 LHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYK 402

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G +++A EL R +     +  +  +N L++GLC SG+L+    L   +    ++PN  T
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YN +++  C    M  + +++  M      PD  T+++LI G  +     +   L  +M 
Sbjct: 463 YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMV 522

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           EK+    AS  + ++    K +  L++   F    R+G V  + +
Sbjct: 523 EKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEI 567



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 216/390 (55%), Gaps = 30/390 (7%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+FP+   Y  LI+ FCK+G     +  F  +      P++  F++LI GL    +++EA
Sbjct: 210 GVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEA 269

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------ANG 195
             LF ++   G EP+ +TY  LI+G C+ G    A  L  +M               A+G
Sbjct: 270 DKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG 329

Query: 196 ---NGEIGV-------VCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              +GE+         +C+     N  TY+TI++GLCK G + +A  L  +MK+  ++PD
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            +TY +L+       +  +A+ L  EM+D+G+QP+VVTFNV+M+ LC + K+++  RLL 
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M+++G+ PNA TYN++M  +C+   +  + E++  M + G   D  +YNILI G+CK +
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++EA  L++EMV K    T  +YN L  G F+  ++  A +LF+EM+R+G+ A    Y 
Sbjct: 510 NMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            F+D   + G +   +EL     I KC LD
Sbjct: 570 LFVDMNYEEGNMETTLELCDE-AIEKCLLD 598



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 241/448 (53%), Gaps = 9/448 (2%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM-IALNLFEEMANGNGEIGVVCKPNT 207
           EA   F KL  +G   +  + N  +  L      + + L +F E      ++GV    NT
Sbjct: 57  EARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFP----QLGVCW--NT 110

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +Y+ +++ L + G + +A  L ++M+ +   PDVV+Y ++I G CH  +  +  +L  E
Sbjct: 111 ESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKE 170

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  +G++P++ T++ I+  LCK+ K+ E  ++L  M++RGV P+   Y TL+DGFC +G 
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A +LF  ME+     D ++++ LI G   + +V EA  L+ EM+ KG +P  VTY  
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  ++ +++ A  L ++M + G+  +  TYT   DGLCK+G +  A EL   +    
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            +L+I  YN +++GLCK+G +  A +L   +    L P+ +TY  ++      G+M KAR
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV-SIVVDL 566
           +L  +M +    P V+TF++L++G     +      LL  M EK +MP+A+   SI+   
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470

Query: 567 LVKNEISLKSLPSFLVQERQGEVGESNV 594
            ++N + + S   +     QG V +SN 
Sbjct: 471 CIRNNMRI-STEIYRGMCAQGVVPDSNT 497



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 238/469 (50%), Gaps = 7/469 (1%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFT 155
           + +++      + G ++     F ++L      +A + N  +  L ++  ++     +F+
Sbjct: 40  HVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFS 99

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           +    G   N  +YN L+N L R G    A +L   M          C P+ V+Y+TIID
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKG------CIPDVVSYTTIID 153

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           G C  G + K   L  +M+ + + P++ TY+S+I  LC +    E +++  EMM +GV P
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP 213

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
             V +  ++D  CK      A +L   M  R + P++  ++ L+ G    GK+  A++LF
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M   G + D+V+Y  LI+GYCK  E+++A  L+ +MV  G+ P VVTY  L  GL + 
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +++ A +L  EM R G+  +  TY T ++GLCK G I++AV+L   ++      D   Y
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             L+D   K+G +  A EL   +    L P VVT+N+++ GLC  G+++    L   M E
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
               P+  T++ ++  +   N      E+   M  + V+PD++  +I++
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 225/451 (49%), Gaps = 12/451 (2%)

Query: 65  PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+  ++        L K       +   GL PNLYTY+ +I   CK G+V  G   
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +++    P+   + +LI G         A  LF++++A    P+ I ++ LI GL  
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G  + A  LF EM     E      P+ VTY+ +IDG CK G + KA  L  QM    +
Sbjct: 263 SGKVVEADKLFNEMIKKGFE------PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VVTY +L  GLC + + + A  L  EM  +G+Q ++ T+N I++ LCK   + +A +
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L++ M + G+ P+  TY TLMD +   G++ +A EL   M   G +   V++N+L+NG C
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            + ++E+   L + M+ KGI P   TYN++       + +  + +++  M   GV  D+ 
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I G CK   + EA  L + +   +  L   +YN LI G  K  +L  A +LF  +
Sbjct: 497 TYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM 556

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
               LV +   YN+ +     +G M+   +L
Sbjct: 557 RREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G+ P+  TYNILI   CK   +   +     ++   F   A+++N+LIKG     +++
Sbjct: 488 AQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLL 547

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
           EA  LF +++  G   +   YN  ++     G+    L L +E
Sbjct: 548 EARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 260/511 (50%), Gaps = 13/511 (2%)

Query: 67  VSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V  F  L+   A+    D  L+      +     +L  YN+ I+CF K+G+V + +  F 
Sbjct: 238 VHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFH 297

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  T+ +LI  L    R+ EA  LF +L      P V  YNT+I G    G
Sbjct: 298 EMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAG 357

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A +L E            C P+ + Y+ I+  L ++G V++A  +  +M+ ++  P
Sbjct: 358 KFDEAYSLLERQKRKG------CIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAP 410

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++ TYN LI  LC A +   A ++   M + G+ P+++T N+++D LCK +K+DEA  + 
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             +  +   P++ T+ +L+DG    G+++ A  L+  M       + V Y  LI  + K 
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+   +Y+EMV +G  P ++  N+    +F+  +VE    LF+E++  G+  D R+Y
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GL K G+  E  +LF  ++     LD+ AYN +IDG CKSG++  A++L   +  
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L P VVTY  ++ GL    ++D+A  LF + +      +V+ +  LI GF ++    +
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L ++ +K + P++   + ++D LVK E
Sbjct: 711 AYLILEELMQKGLTPNSYTWNCLLDALVKAE 741



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 263/532 (49%), Gaps = 18/532 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK--------HYDTRLNATGLFPNLYTY 99
           +EA+ + +   R     P V ++N +L  L +          H + R +A    PNL TY
Sbjct: 360 DEAYSLLERQKR-KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA---PNLTTY 415

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           NILI+  CK G +         +  +   PN  T N +I  L    ++ EA ++F  L  
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDH 475

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
             C P+  T+ +LI+GL R G    A +L+E+M + + +I     PN V Y+++I    K
Sbjct: 476 KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD-QI-----PNVVVYTSLIQNFFK 529

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G  +    ++ +M     +PD++  NS +  +  A +  + + LF E+  QG+ P V +
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +++++  L K     E  +L   M ++G+  +   YNT++DGFC  GK+++A +L   M+
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           + G +   V+Y  +++G  K   ++EA  L+ E  S G+   VV Y++L  G  ++ +++
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A  + +E+ + G+  ++ T+   +D L K   I EA   F+ ++ LKC  +   Y+ +I
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +GLC   +   A+  +  +    L PN +TY  MI GL   G + +AR LF   + +   
Sbjct: 770 NGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGV 829

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           PD   ++ +I G    N+      +  + + K    ++    +++D L K +
Sbjct: 830 PDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKAD 881



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 207/389 (53%), Gaps = 7/389 (1%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           Y+  L++  + PN+  Y  LI  F K GR   G   +  ++    +P+    NS +  + 
Sbjct: 505 YEKMLDSDQI-PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVF 563

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               + +  ALF ++KA G  P+V +Y+ LI+GL + G +     LF EM      + V+
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVL 623

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
                  Y+T+IDG CK G VDKA  L  +MK + + P VVTY S++ GL   +  +EA 
Sbjct: 624 ------AYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAY 677

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF E    GV  +VV ++ ++D   K  ++DEA  +L+ ++Q+G+ PN+ T+N L+D  
Sbjct: 678 MLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDAL 737

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
               +I+ A+  F +M+++ C  + ++Y+I+ING C  ++  +A   ++EM  +G+KP  
Sbjct: 738 VKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNN 797

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TY T+  GL +   V  A  LFD  +  G   D+  Y   I+GL      ++A  +F  
Sbjct: 798 ITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            R+  C ++ +    L+D L K+  L+ A
Sbjct: 858 TRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 213/452 (47%), Gaps = 9/452 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+       ++ EA  +   ++ F   P    Y TLI  L         L LF +M    
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQ--- 230

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            EIG   + N   ++T++    +EG +D A +L  +MK  +   D+V YN  I       
Sbjct: 231 -EIGY--EANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVG 287

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD-LMVQRGVRPNACTY 315
             + A + F EM  QG+ P  VT+  ++  LCK R++DEA  L + L + R V P    Y
Sbjct: 288 KVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSV-PCVYAY 346

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           NT++ G+   GK + A  L    +  GC    ++YN ++    +  +VEEAL ++ EM  
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-R 405

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +   P + TYN L   L +  ++E ALK+ D M+  G+  +  T    ID LCK   + E
Sbjct: 406 QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A  +F  L    C  D + +  LIDGL + GR+  A+ L+  +     +PNVV Y  +IQ
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
                G+ +    ++ +M     +PD++  +  +    +  E  K   L  ++K + ++P
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           D    SI++  LVK   S ++   F   + QG
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 6/354 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+L   N  ++C  K G V  G   F  I      P+  +++ LI GL       E 
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRET 606

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF ++K  G   +V+ YNT+I+G C++G    A  L EEM           +P  VTY
Sbjct: 607 YKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG------LQPTVVTY 660

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            +++DGL K   +D+A  LF + K   ++ +VV Y+SLI G       +EA  +  E+M 
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 720

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P+  T+N ++D L K  ++DEA      M      PNA TY+ +++G C++ K N+
Sbjct: 721 KGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNK 780

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   +  M+  G K ++++Y  +I G  K   V EA  L+    + G  P    YN +  
Sbjct: 781 AFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIE 840

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           GL   ++   A  +F+E +  G   +++T    +D L K   + +A  +   LR
Sbjct: 841 GLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLR 894



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 183/388 (47%), Gaps = 17/388 (4%)

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN-PDVV 243
           ALN+F+EM+     +GV+ +   V              V      +++ K +  + P+V 
Sbjct: 90  ALNVFDEMSQPEVIVGVMKRLKDVN-------------VAFQYFRWVERKTQQAHCPEV- 135

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            YN+ +  +    + +  +++  EM   G   S      ++    K+ K+ EA  ++++M
Sbjct: 136 -YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            +   RP    Y TL+       + +    LF  M+ +G + +   +  L+  + +   +
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + ALSL  EM S      +V YN       ++ +V+ A K F EM+  G+  D  TYTT 
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I  LCK   + EAVELF  L + +    + AYN +I G   +G+   A+ L         
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+V+ YN ++  L   G++++A  +  +M ++ AAP++ T+++LI    +  E     +
Sbjct: 375 IPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD-AAPNLTTYNILIDMLCKAGELEAALK 433

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +   MKE  + P+   V+I++D L K +
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQ 461


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 237/460 (51%), Gaps = 12/460 (2%)

Query: 68  SSFNILLASL-----AKNKH-YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           +S+NI++ SL      K  H    +++     P++ +Y+ +I+ +C +G +         
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +      PN  T+NS+I  L    +  EA  +  ++ +    P+ + Y TLI+G  + GH
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A   F+EM +          P+ +TY+T+I G  + G V + + LF +M    + PD
Sbjct: 379 VRTANKWFDEMLSKK------ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY +LI   C A +   A  L  EM+  G+ P++VT+  ++D LCK+ ++D A+ LLD
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M ++G++ N C YN++++G C  G I +A +L   ME  G   D ++Y  +I+ YC+  
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           ++++A  L +EM+ +G++PTVVT+N L  G   +  +E   +L   M   G+  D  TY 
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T +   C    +    ++++ +R      D   YN LI G CK+  LK AW L+  +   
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             VP V +YN +I+      +  +AR+LF +M  +    D
Sbjct: 673 GYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVAD 712



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 233/476 (48%), Gaps = 6/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  N  +YNI+I   C++G+V        ++     TP+  +++++I G      + +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   ++  G +PN  TYN++I  LC+ G +  A  +  EM +          P+ V Y
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK------IIPDNVVY 366

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I G  K G V  A   F +M  + I+PD +TY +LI G        E + LF EM+ 
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++P  VT+  ++D  CK  +M  A  L + MVQ G+ PN  TY  L+DG C  G+++ 
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A EL   M   G + +   YN ++NG CK   +E+A+ L +EM   GI P  +TY T+  
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVID 546

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
               +  ++ A KL  EM   G+     T+   ++G C  G + +   L   +       
Sbjct: 547 AYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVP 606

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   YN L+   C    +    +++  + +  + P+  TYNI+I+G C    + +A  L+
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +M E    P V +++ LI  F +  +  +  EL  +M+   ++ D  I +  VD+
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDM 722



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 213/410 (51%), Gaps = 44/410 (10%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSLGF 116
           + P+    +S  +LL  + K+   +  L    +  + P+   Y  LI+ F K+G V    
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  +L    +P+  T+ +LI+G     +++E   LF ++ + G +P+ +TY TLI+  
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+ G  + A +L  EM     ++G+   PN VTY  +IDGLCK G +D A  L  +M+ +
Sbjct: 444 CKAGEMVNAFSLHNEMV----QMGMT--PNIVTYGALIDGLCKHGELDTANELLDEMRKK 497

Query: 237 N-----------------------------------INPDVVTYNSLIHGLCHANDWNEA 261
                                               I+PD +TY ++I   C   D ++A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            +L  EM+D+G+QP+VVTFNV+M+  C    +++  RLL  M+++G+ P+A TYNTLM  
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C+   +N   +++  M + G   D  +YNILI G+CK + ++EA  LY+EM+ KG  PT
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           V +YN L    ++  +   A +LF+EM+  G+ AD   Y  F+D   + G
Sbjct: 678 VTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 237/472 (50%), Gaps = 10/472 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-A 152
           PN   ++I      +IG +S       ++L         + N+ +  +   S  +E A  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F +   +G   N  +YN +I  LCR G    A  L  +M   +        P+ V+YST
Sbjct: 248 VFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS------TPDVVSYST 298

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDG C  G + KA  L   M+ + + P+  TYNS+I  LC      EA+++  EMM Q 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P  V +  ++    K   +  A++  D M+ + + P+  TY TL+ GF   GK+   +
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            LF  M S G K D+V+Y  LI+ YCK  E+  A SL+ EMV  G+ P +VTY  L  GL
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +++ A +L DEM++ G+  +   Y + ++G+CK G I +A++L + + +   + D 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +ID  C+ G +  A +L   +    L P VVT+N+++ G C  G ++    L   
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           M E    PD IT++ L+      N  +   ++  +M+ + V PD++  +I++
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 230/435 (52%), Gaps = 16/435 (3%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           + PN   F+   + L     + EA  L  KL ++G    V + N  ++ +      +   
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGI--- 242

Query: 187 NLFEEMANGNGEIGVVCK----PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
               EMA     I V C+     NT +Y+ II  LC+ G V +A  L +QM   +  PDV
Sbjct: 243 ----EMA-----IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V+Y+++I G CH  +  +A +L  +M  +G++P+  T+N I+  LCK  K  EA ++L  
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+ + + P+   Y TL+ GF  +G +  A + F  M S     D ++Y  LI G+ +  +
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V E  +L+ EM+S+G+KP  VTY TL     +  ++ +A  L +EM + G+  +  TY  
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDGLCK+G +  A EL   +R    +L++  YN +++G+CK+G ++ A +L   +    
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+ +TY  +I   C  G +DKA  L  +M +    P V+TF++L++GF  +      +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 543 ELLHKMKEKKVMPDA 557
            LL  M EK ++PDA
Sbjct: 594 RLLGWMLEKGIVPDA 608



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 254/538 (47%), Gaps = 17/538 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILI-----NCF-CKIGRVSLGF- 116
           P P++ F+I    L +  H      A  L   L +Y +++     N F  +I   S G  
Sbjct: 188 PNPIA-FDIFFQVLVEIGHLS---EARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +A         + N  ++N +I  L    ++ EA  L  ++      P+V++Y+T+I+G 
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C  G    AL L ++M           KPN  TY++II  LCK G   +A+ +  +M  +
Sbjct: 304 CHLGELKKALKLMDDMQIKG------LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I PD V Y +LIHG         A + F EM+ + + P  +T+  ++    +  K+ E 
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   M+ RG++P+  TY TL+D +C  G++  A  L   M  MG   + V+Y  LI+G
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK+ E++ A  L  EM  KG++  V  YN++  G+ +   +E A+KL  EM+  G+  D
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYTT ID  C+ G I +A +L + +     +  +  +N L++G C  G L+    L  
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    +VP+ +TYN +++  C    M+    ++  M     APD  T+++LI G  +  
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
              +   L  +M EK  +P  +  + ++    K     ++   F      G V +  +
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEI 715



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 219/448 (48%), Gaps = 12/448 (2%)

Query: 63  SPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           S P V S++ +      L  L K       +   GL PN YTYN +I   CKIG+     
Sbjct: 289 STPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAE 348

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                ++     P+   + +LI G      +  A   F ++ +    P+ ITY TLI G 
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G  +   NLF EM      I    KP+ VTY+T+ID  CK G +  A +L  +M   
Sbjct: 409 GQGGKVIEPQNLFHEM------ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + P++VTY +LI GLC   + + A  L  EM  +G+Q +V  +N +++ +CK   +++A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            +L+  M   G+ P+A TY T++D +C +G I++A +L   M   G +   V++N+L+NG
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +C    +E+   L   M+ KGI P  +TYNTL       + +    K++  M+  GVA D
Sbjct: 583 FCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD 642

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           + TY   I G CK   + EA  L++ +        + +YN LI    K  +   A ELF 
Sbjct: 643 SNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFE 702

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +    LV +   YN  +     +G ++
Sbjct: 703 EMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 163/319 (51%), Gaps = 6/319 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + GL P+  TY  LI+ +CK G +   F     +++   TPN  T+ +LI GL     + 
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  L  +++  G + NV  YN+++NG+C+ G+   A+ L +EM     E+  +  P+ +
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-----EVAGI-DPDAI 539

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T+ID  C+ G +DKA  L  +M D  + P VVT+N L++G C      +  RL   M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +++G+ P  +T+N +M + C    M+  +++   M  +GV P++ TYN L+ G C    +
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L+  M   G      SYN LI  + K ++  EA  L+ EM   G+      YN  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719

Query: 389 FLGLFEIHQVEHALKLFDE 407
               +E   VE  L L DE
Sbjct: 720 VDMCYEEGDVEITLNLCDE 738



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G+ P+  TYNILI   CK   +   +  +  ++   + P   ++N+LIK  + + 
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKR 692

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
           +  EA  LF +++  G   +   YN  ++     G   I LNL +E
Sbjct: 693 KFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 249/511 (48%), Gaps = 13/511 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           +FD M           S+  ++ +L K    D        L   GL P + TYN+L++  
Sbjct: 207 VFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDAL 266

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK GRV   F   GR+ +   TP+  TF  LI GL    R  E   +  +++  G  PN 
Sbjct: 267 CKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNE 326

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + YN LI   CR GH   AL LF+EM      +    KP  VTY+ I   LCKEG +++A
Sbjct: 327 VIYNELIGWHCRKGHCSQALRLFDEM------VLKKMKPTAVTYNLIAKALCKEGEMERA 380

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK-RLFIEMMDQGVQPSVVTFNVIMD 285
           + +   M    +      +N+++  L       E+   +  EM+ +G++P+       M 
Sbjct: 381 ERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMR 440

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
           ELCK  K  EA  +    + +G+  N  T N L+ G C    +  A ++  +M + G + 
Sbjct: 441 ELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIEL 500

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D ++YNI+I G CK+ ++EEA+ L+ +M  +G KP + T+NTL      + ++E    L 
Sbjct: 501 DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLL 560

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D+M+ +G+  D  +Y T IDG CK   I +A E    L     + ++  YN LI G  ++
Sbjct: 561 DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRN 620

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G +  A +   ++    + P  VTY  ++  +C+ G +++A+ +F    EN     VI +
Sbjct: 621 GDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGY 680

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            ++I G+ ++ +  +      +M+ + + P+
Sbjct: 681 TIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 207/425 (48%), Gaps = 8/425 (1%)

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
           A+  +  AA  F  L + G  P++ T N  +  L R G    A  +F+EM          
Sbjct: 162 AQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRN----- 216

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
              N  +Y+ +I  LCK G VD    +  ++    + P VVTYN L+  LC +    EA 
Sbjct: 217 VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 276

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           RL   M   G+ PSVVTF ++++ L +  +  E   +L  M Q GV PN   YN L+   
Sbjct: 277 RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 336

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G  ++A  LF  M     K   V+YN++    CK  E+E A  +  +M+S G+    
Sbjct: 337 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 396

Query: 383 VTYNTLFLGLFE-IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL-F 440
             +NT+   L +   ++E  + + +EM   G+  +    T  +  LCK G   EAV + F
Sbjct: 397 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 456

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
           +TL      +++   N LI GLC+   +K A ++  ++ +  +  + +TYNIMI+G C D
Sbjct: 457 KTLN-KGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKD 515

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            +M++A  L  DM      PD+ TF+ L+H +  + +  +   LL +MK + + PD    
Sbjct: 516 SKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSY 575

Query: 561 SIVVD 565
             ++D
Sbjct: 576 GTIID 580



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 230/516 (44%), Gaps = 51/516 (9%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +F IL+  LA+ + +         +   G+ PN   YN LI   C+ G  S     
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC- 177
           F  ++     P A T+N + K L  E  +  A  +   + + G   +   +NT++  L  
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 408

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           RT      +++  EM           +PN    +  +  LCK G   +A  ++ +  ++ 
Sbjct: 409 RTRRLESVVSITNEMVTRG------MRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 462

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           +  ++ T N+LIHGLC      EA ++   M+++G++   +T+N+++   CK+ KM+EA 
Sbjct: 463 LGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 522

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L   M +RG +P+  T+NTL+  +C +GK+     L   M++ G + D VSY  +I+G+
Sbjct: 523 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 582

Query: 358 CKNKEVEEALSLYRE-----------------------------------MVSKGIKPTV 382
           CK K++ +A     E                                   M S GI+PT 
Sbjct: 583 CKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTN 642

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY +L   +     VE A  +F + + + V      YT  I G CK G ++EAV  F  
Sbjct: 643 VTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEE 702

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +R      +   Y  L+    KSG  + A +LF  +    ++P+ +TY  +I        
Sbjct: 703 MRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNS 762

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
           +DK      ++   A   D   +++L +G   IN P
Sbjct: 763 LDKDIGHTAELSSGALTKDDRMYNILSNG---INAP 795



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 1/205 (0%)

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTTFI 424
           A   +R + S+G  P++ T N     L    Q++ A ++FDEM+    VA +  +YT  I
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
             LCK G +    E+   L     +  +  YN L+D LCKSGR++ A+ L   +  G + 
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+VVT+ I+I GL    +  +   +  +ME+   +P+ + ++ LI    R    S+   L
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVK 569
             +M  KK+ P A   +++   L K
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCK 373



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 2/151 (1%)

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           TFI    + G +  A + FR L        I+  N  ++ L ++G+L  A E+F  +   
Sbjct: 156 TFITSPAQ-GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRES 214

Query: 482 VLVP-NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             V  N  +Y  MI+ LC  G++D   ++  ++      P V+T+++L+    +     +
Sbjct: 215 RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 274

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              L  +M++  + P      I+++ L + E
Sbjct: 275 AFRLKGRMEQGGMTPSVVTFGILINGLARGE 305


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 269/535 (50%), Gaps = 17/535 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNI 101
            A  +FD M R+    P + S + LL  L +          +D ++  TG+ P++Y  +I
Sbjct: 174 HALYVFDEMSRI-GRVPGLRSCSFLLGKLVQKGEGRVAVMVFD-QIVGTGIVPDVYMCSI 231

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  C++GRV +      ++++    PN  T+N L+ G            +   +   G
Sbjct: 232 VVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              NV+T   L+ G C+ G    A  L  E+     E+ VV   +   Y  ++DG C+ G
Sbjct: 292 VSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEED--ELLVV---DERVYGVLVDGYCQMG 346

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++ A  +  +M    +  ++V  N+LI G C      EA+R+F+ M+D  ++P   ++N
Sbjct: 347 RMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYN 406

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  C+  K+ +A  L + M+  G+ P   TYNT++ G   +G  + A  L+  M   
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   +++S   +++ + K  + + A+ L++E++ +G   + V +NT+  GL ++ ++  A
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
             +FD M+  G++ D  TY T  DG CKNG + EA ++   +        I+ YN LIDG
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L K  +L    +L   +    L PNVVTY  +I G C++ ++DKA  L+ +M E    P+
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           V+    ++    R +  S+   +L KM +  ++   +  S   D LVKN+++L++
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCS---DKLVKNDLTLEA 698



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 241/510 (47%), Gaps = 42/510 (8%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +++L+  F + G        F  + R    P   + + L+  L  +     A  +F ++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+V   + ++N  C+ G   +A+ + E+M     E      PN VTY+ +++G 
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLE------PNVVTYNGLVNGY 271

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGVQPS 276
              G  +  + +   M +  ++ +VVT   L+ G C     +EA++L  E+  D+ +   
Sbjct: 272 VGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVD 331

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
              + V++D  C+  +M++A R+ D M++ G++ N    NTL+ G+C +G++  AE +F 
Sbjct: 332 ERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFV 391

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M     K D  SYN L++GYC+  +V +A  L  EM+  GI PTVVTYNT+  GL ++ 
Sbjct: 392 GMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVG 451

Query: 397 QVEHALKLFDEMQRDGVAAD-----------------------------------TRTYT 421
             + AL L+  M   GV  +                                   T  + 
Sbjct: 452 SYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFN 511

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I GLCK G ++EA  +F  ++ L    D   Y  L DG CK+G ++ A+++   +   
Sbjct: 512 TMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQ 571

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            +  ++  YN +I GL    +++   DL ++M+    +P+V+T+  LI G+    +  K 
Sbjct: 572 AMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKA 631

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             L  +M E+   P+  + S +V  L +++
Sbjct: 632 FHLYFEMIERGFTPNVVVCSKIVSSLYRDD 661



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 225/504 (44%), Gaps = 76/504 (15%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            GL  N+   N LI  +CK+G+V      F  ++     P+  ++N+L+ G   E ++ +
Sbjct: 361 VGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSK 420

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L  ++   G  P V+TYNT+I GL   G    AL+L+  M     E GV   PN ++
Sbjct: 421 AFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMV----ERGVT--PNEIS 474

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
             T++D   K G  D+A  L+ ++         V +N++I GLC      EA  +F  M 
Sbjct: 475 CCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMK 534

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           + G+ P  +T+  + D  CKN  + EA ++  +M ++ +  +   YN+L+DG   + K+N
Sbjct: 535 ELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLN 594

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
              +L   M++ G   + V+Y  LI+G+C  +++++A  LY EM+ +G  P VV  + + 
Sbjct: 595 DVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIV 654

Query: 390 LGLFEIHQVEHALKLFDEM-------------------------QRDGVAADTR------ 418
             L+   ++  A  + D+M                         Q+   + D        
Sbjct: 655 SSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSL 714

Query: 419 ----TYTTFIDGLCKNGYIIEAVELFRTLR--------------ILKCEL---------- 450
                Y   IDGLCK+G + EA  +   L               I  C +          
Sbjct: 715 SNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKL 774

Query: 451 -----------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
                      +I  YN LI+GLCK G +  A  LF  L    LVPN VTYNI+I   C 
Sbjct: 775 RDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCR 834

Query: 500 DGQMDKARDLFLDMEENAAAPDVI 523
            G +DKA  L   M E   +  +I
Sbjct: 835 IGDLDKASRLREKMTEEGISTRII 858



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 181/413 (43%), Gaps = 70/413 (16%)

Query: 30  VHFRDLTTREGDINVITPNEAFC--IFDYMLRMHPS---------------PPPVSSFNI 72
           +H   L    G    +TPNE  C  + D   +M  S                    +FN 
Sbjct: 457 LHLWHLMVERG----VTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNT 512

Query: 73  LLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
           +++ L K          +D R+   GL P+  TY  L + +CK G V   F   G + R 
Sbjct: 513 MISGLCKMGKLMEAGAVFD-RMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQ 571

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
             + +   +NSLI GL    ++ +   L  +++  G  PNV+TY TLI+G C       A
Sbjct: 572 AMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKA 631

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI------- 238
            +L+ EM     E G    PN V  S I+  L ++  + +A  +  +M D +I       
Sbjct: 632 FHLYFEMI----ERGFT--PNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKC 685

Query: 239 ---------------------NPDV-------VTYNSLIHGLCHANDWNEAKRLFIEMMD 270
                                  D+       + YN  I GLC +   +EA+ +   +M 
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMS 745

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P   T+  ++     +  +DEA +L D M+++G+ PN   YN L++G C +G I+R
Sbjct: 746 RGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDR 805

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           A+ LF  +   G   + V+YNILI  YC+  ++++A  L  +M  +GI   ++
Sbjct: 806 AQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 171/395 (43%), Gaps = 56/395 (14%)

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV-------- 282
           L  ++ +  P  ++Y+ L+H L HA  + EA  +  ++MD     +   + V        
Sbjct: 90  LATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVY 149

Query: 283 --------IMDELCK---NRKM--------DEASRL------------------------ 299
                   + D L K    R M        DE SR+                        
Sbjct: 150 KEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRV 209

Query: 300 ----LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
                D +V  G+ P+    + +++  C +G+++ A E+   M   G + + V+YN L+N
Sbjct: 210 AVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVN 269

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VA 414
           GY    + E    + R M  +G+   VVT   L  G  +  +++ A KL  E++ D  + 
Sbjct: 270 GYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLV 329

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D R Y   +DG C+ G + +AV +   +  +  ++++   N LI G CK G++  A  +
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    L P+  +YN ++ G C +G++ KA  L  +M  +   P V+T++ +I G + 
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +        L H M E+ V P+      ++D   K
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFK 484


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 261/545 (47%), Gaps = 37/545 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           I + M+    +P P S FN L+ S    K Y        R+   G  P    YNI I   
Sbjct: 164 IINMMMTEGCNPNP-SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 222

Query: 107 CKIGRV------SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           C   ++       L    +G +L +    N     +  + L    +  +A  L  ++   
Sbjct: 223 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+  TY+ +I  LC       A  LF+EM      +GV   P+  TY+ +ID  CK 
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKA 336

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A+ LF +M+    +P VVTY +LIH    A    +A  +F  M+D G +P+ VT+
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396

Query: 281 NVIMDELCKNRKMDEASRLLDLMV----------------QRGVRPNACTYNTLMDGFCL 324
             ++D LCK   + +A  +   ++                +  + PN  TY  L+DG C 
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 456

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K++ A EL  +M S GC+ + + Y+ LI+G+CK  +++ A  ++ +M   G  P+V T
Sbjct: 457 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 516

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   +F+  +++ A+K+  +M +D    +  TYT  IDGLC+ G   +A++L   + 
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  LIDGL K+G++  + +LF  +      PN VTY ++I  LC  G +D
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KAR L  +M++      +  +   I GF +    S    +L +M+    +P A +  +++
Sbjct: 637 KARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL--GILEEMESYGTVPIAPVYGMLI 694

Query: 565 DLLVK 569
           D   K
Sbjct: 695 DCFSK 699



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 235/477 (49%), Gaps = 24/477 (5%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P++YTY ILI+ FCK G +      F  +     +P   T+ +LI       +
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA----NGNGEIGVV 202
           + +A  +F ++   GC PN +TY  L++GLC+ G+   A  ++ ++     + + +    
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 203 CK------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           C+      PN VTY  ++DGLCK   VD A  L   M      P+ + Y++LI G C A 
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             + A+ +F++M   G  PSV T+  ++D + K+ ++D A ++L  M++    PN  TY 
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++DG C +G+  +A +L   ME  GC  + V+Y  LI+G  K  +++ +L L+ +M  K
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY---- 432
           G  P  VTY  L   L     ++ A  L  EM++       + Y   I G  K+      
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG 673

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---FCSLPHGVLVPNVVT 489
           I+E +E + T+ I         Y  LID   K+GRL+ A EL      +P  V   N + 
Sbjct: 674 ILEEMESYGTVPI------APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM- 726

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           Y  +IQ LC   Q+++A  L+ +M      P++  F  LI G + + +  +  +L +
Sbjct: 727 YASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 246/589 (41%), Gaps = 101/589 (17%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+  TYN L+      G+V LGF     +  S F  +  T       L  E R  +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  + + F  +  + T+  +I+GL    +   A++    M   +      C PN VTY
Sbjct: 95  LDMIER-EDFKLDTVLCTH--MISGLMEASYFDEAMSFLHRMRCNS------CIPNVVTY 145

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T++ G  K+  +   K +   M  E  NP+   +NSL+H  C+  D+  A +L   M  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 271 QGVQPSVVTFNVIMDELCKNRKM------------------------------------- 293
            G  P  V +N+ +  +C   K+                                     
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 265

Query: 294 ----DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
               D+A +L+  M+++G  P+  TY+ ++   C   K+ +A  LF  M+ +G   D  +
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y ILI+ +CK   +E+A  L+ EM S G  PTVVTY  L     +  QV  A  +F  M 
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------RILKCE------LDIQ 453
             G   +  TY   +DGLCK G I +A E++  L              CE       ++ 
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  L+DGLCK+ ++  A EL  ++      PN + Y+ +I G C  G++D A+++FL M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505

Query: 514 E-----------------------------------ENAAAPDVITFDMLIHGFIRINEP 538
                                               +++  P+V+T+  +I G  RI E 
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 565

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            K  +LL  M+EK   P+    + ++D L K      SL  F    R+G
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 180/426 (42%), Gaps = 86/426 (20%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+ +  K K          R+   G  PN  TY  L++  CK G +S  F  
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 119 FGRIL----------------RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           + +++                R    PN  T+ +L+ GL    ++  A  L   + + GC
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMAN------------------GNGEIGVV-- 202
           EPN I Y+ LI+G C+ G    A  +F +M                     +G + +   
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN VTY+ +IDGLC+ G  +KA  L   M+++  +P+VVTY +LI GL 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR------- 306
            A   + +  LF +M  +G  P+ VT+ V+++ LC    +D+A  LL  M Q        
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 307 --------------------------GVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
                                     G  P A  Y  L+D F   G++  A EL   M  
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 341 M--GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +    K D+  Y  LI   C   +VEEA  LY EM  +G  P +  +  L  GL E+ + 
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 399 EHALKL 404
           + AL+L
Sbjct: 776 DEALQL 781



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 154/376 (40%), Gaps = 40/376 (10%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +KD    P  VTYN+L+  L  A   +   R+  EM + G      T       LCK  +
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 293 --------------------------------MDEASRLLDLMVQRGVRPNACTYNTLMD 320
                                            DEA   L  M      PN  TY TL+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GF    ++   + +   M + GC  +   +N L++ YC  K+   A  L   M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 381 TVVTYNTLFLG-------LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             V YN +F+G       L     ++ A K++ EM       +      F   LC  G  
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A +L + +       D   Y+ +I  LC + +++ A+ LF  +    + P+V TY I+
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I   C  G +++A+ LF +M     +P V+T+  LIH +++  +  + N++ H+M +   
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 554 MPDASIVSIVVDLLVK 569
            P+      +VD L K
Sbjct: 390 RPNDVTYGALVDGLCK 405


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 238/460 (51%), Gaps = 12/460 (2%)

Query: 68  SSFNILLASL-----AKNKH-YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           +S+NI++ SL      K  H    +++     P++ +Y+ +I+ +C +G +         
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +      PN  T+NS+I  L    +  EA  +  ++ +    P+ + Y TLI+G  + GH
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A   F+EM +          P+ +TY+T+I G  + G V + + LF +M    + PD
Sbjct: 379 VRTANKWFDEMLSKK------ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY +LI   C A +   A  L  EM+  G+ P++VT+  ++D LCK+ ++D A+ LLD
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M ++G++ N C YN++++G C  G I +A +L   ME  G   D ++Y  +I+ YC+  
Sbjct: 493 EMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLG 552

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           ++++A  L +EM+ +G++PTVVT+N L  G   +  +E   +L   M   G+  D  TY 
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T +   C    +    ++++ +R      D   YN LI G CK+  LK AW L+  +   
Sbjct: 613 TLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             VP V +YN +I+      ++ +AR+LF +M  +    D
Sbjct: 673 GYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVAD 712



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 214/410 (52%), Gaps = 44/410 (10%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSLGF 116
           + P+    +S  +LL  + K+   +  L    +  + P+   Y  LI+ F K+G V    
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  +L    +P+  T+ +LI+G     +++E   LF ++ + G +P+ +TY TLI+  
Sbjct: 384 KWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVY 443

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+ G  + A +L  EM     ++G+   PN VTY  +IDGLCK G +D A  L  +M+ +
Sbjct: 444 CKAGEMVNAFSLHNEMV----QMGMT--PNIVTYGALIDGLCKHGELDTANELLDEMRKK 497

Query: 237 N-----------------------------------INPDVVTYNSLIHGLCHANDWNEA 261
                                               I+PD +TY ++I   C   D ++A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            +L  EM+D+G+QP+VVTFNV+M+  C    +++  RLL  M+++G+ P+A TYNTLM  
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C+   +N   +++  M + G   D  +YNILI G+CK + ++EA  LY+EM+ KG  PT
Sbjct: 618 HCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPT 677

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           V +YN L    ++  ++  A +LF+EM+  G+ AD   Y  F+D   + G
Sbjct: 678 VTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 233/476 (48%), Gaps = 6/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  N  +YNI+I   C++G+V        ++     TP+  +++++I G      + +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   ++  G +PN  TYN++I  LC+ G +  A  +  EM +          P+ V Y
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK------IIPDNVVY 366

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I G  K G V  A   F +M  + I+PD +TY +LI G        E + LF EM+ 
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G++P  VT+  ++D  CK  +M  A  L + MVQ G+ PN  TY  L+DG C  G+++ 
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A EL   M   G + +   YN ++NG CK   +E+A+ L +EM   GI P  +TY T+  
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVID 546

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
               +  ++ A KL  EM   G+     T+   ++G C  G + +   L   +       
Sbjct: 547 AYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVP 606

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   YN L+   C    +    +++  + +  + P+  TYNI+I+G C    + +A  L+
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +M E    P V +++ LI  F +  +  +  EL  +M+   ++ D  I +  VD+
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDM 722



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 237/472 (50%), Gaps = 10/472 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-A 152
           PN   ++I      +IG +S       ++L         + N+ +  +   S  +E A  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F +   +G   N  +YN +I  LCR G    A  L  +M   +        P+ V+YST
Sbjct: 248 VFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS------TPDVVSYST 298

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDG C  G + KA  L   M+ + + P+  TYNS+I  LC      EA+++  EMM Q 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P  V +  ++    K   +  A++  D M+ + + P+  TY TL+ GF   GK+   +
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            LF  M S G K D+V+Y  LI+ YCK  E+  A SL+ EMV  G+ P +VTY  L  GL
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +++ A +L DEM++ G+  +   Y + ++G+CK G I +A++L + + +   + D 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +ID  C+ G +  A +L   +    L P VVT+N+++ G C  G ++    L   
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           M E    PD IT++ L+      N  +   ++  +M+ + V PD++  +I++
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 230/435 (52%), Gaps = 16/435 (3%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           + PN   F+   + L     + EA  L  KL ++G    V + N  ++ +      +   
Sbjct: 186 WGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGI--- 242

Query: 187 NLFEEMANGNGEIGVVCK----PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
               EMA     I V C+     NT +Y+ II  LC+ G V +A  L +QM   +  PDV
Sbjct: 243 ----EMA-----IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V+Y+++I G CH  +  +A +L  +M  +G++P+  T+N I+  LCK  K  EA ++L  
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+ + + P+   Y TL+ GF  +G +  A + F  M S     D ++Y  LI G+ +  +
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V E  +L+ EM+S+G+KP  VTY TL     +  ++ +A  L +EM + G+  +  TY  
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDGLCK+G +  A EL   +R    +L++  YN +++G+CK+G ++ A +L   +    
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+ +TY  +I   C  G +DKA  L  +M +    P V+TF++L++GF  +      +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 543 ELLHKMKEKKVMPDA 557
            LL  M EK ++PDA
Sbjct: 594 RLLGWMLEKGIVPDA 608



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 256/538 (47%), Gaps = 17/538 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILI-----NCF-CKIGRVSLGF- 116
           P P++ F+I    L +  H      A  L   L +Y +++     N F  +I   S G  
Sbjct: 188 PNPIA-FDIFFQVLVEIGHLS---EARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +A         + N  ++N +I  L    ++ EA  L  ++      P+V++Y+T+I+G 
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C  G    AL L ++M           KPN  TY++II  LCK G   +A+ +  +M  +
Sbjct: 304 CHLGELKKALKLMDDMQIKG------LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            I PD V Y +LIHG         A + F EM+ + + P  +T+  ++    +  K+ E 
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   M+ RG++P+  TY TL+D +C  G++  A  L   M  MG   + V+Y  LI+G
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK+ E++ A  L  EM  KG++  V  YN++  G+ +   +E A+KL  EM+  G+  D
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYTT ID  C+ G I +A +L + +     +  +  +N L++G C  G L+    L  
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    +VP+ +TYN +++  C    M+    ++  M     APD  T+++LI G  +  
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
              +   L  +M EK  +P  +  + ++    K +  L++   F      G V +  +
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEI 715



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 220/448 (49%), Gaps = 12/448 (2%)

Query: 63  SPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           S P V S++ +      L  L K       +   GL PN YTYN +I   CKIG+     
Sbjct: 289 STPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAE 348

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                ++     P+   + +LI G      +  A   F ++ +    P+ ITY TLI G 
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G  +   NLF EM      I    KP+ VTY+T+ID  CK G +  A +L  +M   
Sbjct: 409 GQGGKVIEPQNLFHEM------ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + P++VTY +LI GLC   + + A  L  EM  +G+Q +V  +N +++ +CK   +++A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            +L+  M   G+ P+A TY T++D +C +G I++A +L   M   G +   V++N+L+NG
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +C    +E+   L   M+ KGI P  +TYNTL       + +    K++  M+  GVA D
Sbjct: 583 FCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD 642

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           + TY   I G CK   + EA  L++ +        + +YN LI    K  ++  A ELF 
Sbjct: 643 SNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFE 702

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +    LV +   YN  +     +G ++
Sbjct: 703 EMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 164/319 (51%), Gaps = 6/319 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + GL P+  TY  LI+ +CK G +   F     +++   TPN  T+ +LI GL     + 
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  L  +++  G + NV  YN+++NG+C+ G+   A+ L +EM     E+  +  P+ +
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-----EVAGI-DPDAI 539

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T+ID  C+ G +DKA  L  +M D  + P VVT+N L++G C      +  RL   M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +++G+ P  +T+N +M + C    M+  +++   M  +GV P++ TYN L+ G C    +
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L+  M   G      SYN LI  + K K++ EA  L+ EM   G+      YN  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719

Query: 389 FLGLFEIHQVEHALKLFDE 407
               +E   VE  L L DE
Sbjct: 720 VDMCYEEGDVEITLNLCDE 738



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 53/106 (50%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G+ P+  TYNILI   CK   +   +  +  ++   + P   ++N+LIK  + + 
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKK 692

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
           +I+EA  LF +++  G   +   YN  ++     G   I LNL +E
Sbjct: 693 KILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 244/476 (51%), Gaps = 7/476 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P   TY +LI    + G     +    ++      P+   FN +IKGL  +    +A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +LF ++   G  P+  TYN LI+ LC+      ALNL+E+M     E GV  KP  VTY
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM----NETGV--KPYIVTY 424

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            +++   C  G +D+A  L+ +M  +   P+VVTY +L+ G  +   +++A  L  EM  
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV  +  T+N +++ LC   ++ E   +L      G  P A TYN++++GF   G +  
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  ++  M + G   + V+Y   I+GYCK    + AL +  ++  KG++P +  YN+L  
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIY 604

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +   + HAL++   M +DG+  +   Y +FI G      + EA+  +  +     +L
Sbjct: 605 GFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDL 664

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  LIDG  K G + FA +L+  +     +P+ +T+  +  GLC +G +D AR L 
Sbjct: 665 DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLL 724

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +M      P+V+ ++MLI+G++R  +  +   L  +M E+K+MPD +   I+V +
Sbjct: 725 DEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGM 780



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 248/554 (44%), Gaps = 48/554 (8%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
           +R    P     F++++ +  K   YD        + A+ + P+    ++ I   CK+  
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            +   +   ++  + F P   TFNS++  L    R+ EA  +  +L A G + +V+   T
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L++G C       AL++FEE        G+V  P  VTY+ +I G  +EG  +KA  L  
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRD----GLV--PTDVTYTVLIRGCTEEGMPEKAYELCR 341

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM+D  + P    +N +I GL +   W +A  LF EM D G+ P   T+N+++  LC+ R
Sbjct: 342 QMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRR 400

Query: 292 K-----------------------------------MDEASRLLDLMVQRGVRPNACTYN 316
           K                                   MDEA +L   M  +G  PN  TY 
Sbjct: 401 KIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYT 460

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           TLM G       ++A  L   M+  G   +D +YN LING C    V E   + +   ++
Sbjct: 461 TLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE 520

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  PT +TYN++  G  +   +  A  ++ +M   G+  +  TYT+FIDG CK      A
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           +++   +R      DI AYN LI G C+ G +  A ++   +    L+PN+  YN  I G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             N   M++A   +  M +     D  T+  LI GF +    +   +L  +M  K  +PD
Sbjct: 641 YKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700

Query: 557 ASIVSIVVDLLVKN 570
               + +   L +N
Sbjct: 701 HITFTALTHGLCRN 714



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 209/496 (42%), Gaps = 65/496 (13%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           TP+A +   L+      +   +A AL  +++  G   +   ++ ++    + G    A+ 
Sbjct: 139 TPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDAVR 198

Query: 188 LFEEMANGNGE---------IGVVCK--------------------PNTVTYSTIID--- 215
           LF+EM     E         I  +CK                    P   T+++++D   
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLV 258

Query: 216 --------------------------------GLCKEGFVDKAKALFLQMKDENINPDVV 243
                                           G C +  V KA  +F +   + + P  V
Sbjct: 259 KGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDV 318

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY  LI G        +A  L  +M D G+ PS   FN+++  L  ++   +A  L   M
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G+ P+A TYN L+   C   KI  A  L+  M   G K   V+Y+ L+  YC N  +
Sbjct: 379 ADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCM 437

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA+ LY EM  KG  P VVTY TL  G       + A  L  EM+++GV+ +  TY T 
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+GLC  G + E  E+ +             YN +I+G  K+G +  A+ ++  +    +
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN+VTY   I G C     D A  +  D+      PD+  ++ LI+GF +    S   +
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQ 617

Query: 544 LLHKMKEKKVMPDASI 559
           +L  M +  ++P+ S+
Sbjct: 618 VLVLMLKDGLLPNISV 633



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 152/356 (42%), Gaps = 34/356 (9%)

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M+   + PD  +   L+     +    +A  L  EM  +G       F+V+M    K  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
             D+A RL D M    + P+    +  +   C +   NRA  +   M+  G    D ++N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +++   K   +EEAL +  E+++ G K +VV   TL  G     +V  AL +F+E  RD
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR-------------ILKCEL-------- 450
           G+     TYT  I G  + G   +A EL R +R             ++K  L        
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 451 -------------DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
                        D   YN LI  LC+  +++ A  L+  +    + P +VTY+ ++   
Sbjct: 372 VSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           C +G MD+A  L+ +M      P+V+T+  L+ G I      K   LL +MK+  V
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 38/289 (13%)

Query: 303 MVQRGVRPNACT-----------------------------------YNTLMDGFCLMGK 327
           M  RGV P+A +                                   ++ +M      G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + A  LF  M +   + D    ++ I   CK ++   AL + R+M   G  P   T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRIL 446
           +   L +  ++E AL + DE+   G        TT + G C    + +A+++F  TLR  
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D+  Y  LI G  + G  + A+EL   +    L+P+   +N++I+GL ND     A
Sbjct: 313 LVPTDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             LF +M + +  PD  T+++LIH   +  +  +   L  KM E  V P
Sbjct: 372 VSLFKEMAD-SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 5/243 (2%)

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           SME+ G   D  S   L+    ++    +AL+L  EM  KG       ++ +    F+  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             + A++LFDEM    +  D R  +  I  LCK      A+ + R ++          +N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            ++D L K GR++ A  +   L       +VV    ++ G C   ++ KA D+F +   +
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-----DLLVKNE 571
              P  +T+ +LI G      P K  EL  +M++  ++P  +  ++V+     D L K+ 
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 572 ISL 574
           +SL
Sbjct: 372 VSL 374


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/471 (30%), Positives = 234/471 (49%), Gaps = 16/471 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +  TG+ P++YTY ILI+CF K G +         ++R    P   T+ +LI       +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI------- 199
           +  A  LF  + A GC PNVITY  LI+G C++G+   A  ++  M  G+ +I       
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYF 633

Query: 200 ----GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                V  KPN VTY  ++DGLCK   V  A+ L   M  +   P+ + Y++LI G C A
Sbjct: 634 KIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
              +EA+ +F +M++ G  P+V T++ ++D L K++++D   ++L  M++    PN   Y
Sbjct: 694 AKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIY 753

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             ++DG   + K + A +L   ME  GCK + V+Y  +I+G+ K  +V++ L L+REM S
Sbjct: 754 TEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGS 813

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KG  P  VTY  L         ++ A  L +EM++        +Y   I+G  K  +I+ 
Sbjct: 814 KGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFIL- 871

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG--VLVPNVVTYNIM 493
           ++ L   +        I  Y  LID   K+GRL+ A EL   +      +      Y  +
Sbjct: 872 SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSL 931

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           I       ++  A +LF DM  +   PD+ TF  L+ G IR+    +  +L
Sbjct: 932 IYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 233/503 (46%), Gaps = 30/503 (5%)

Query: 86  RLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           R+ +T   PN+ TY IL+ C C    ++GR     I    I   C+ P+   FNSL+   
Sbjct: 333 RMRSTSCIPNVQTYRILL-CGCLNKKQLGRCKR--ILSMMIAEGCY-PSYTIFNSLVHAY 388

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM--IALNLFEEMANGNGEI 199
                   A  L  K++   C+P  + YN LI  +C  G     +   L E+  N     
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448

Query: 200 GVVC-KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
           G V  K N V+++     LC  G  +KA  +  +M      PD  TY+ +I  LC+A+  
Sbjct: 449 GTVLNKVNVVSFARC---LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRV 505

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
             A  LF EM   GV P V T+ +++D   K   + +A   LD MV+ G  P   TY TL
Sbjct: 506 ENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTL 565

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  +    K++ A ELF  M + GC  + ++Y  LI+GYCK+  +E+A  +Y  M     
Sbjct: 566 IHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD 625

Query: 379 ----------------KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
                           KP VVTY  L  GL + H+V+ A  L + M  DG   +T  Y  
Sbjct: 626 IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA 685

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG CK   + EA E+F  +       ++  Y+ LID L K  RL    ++   +    
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENS 745

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             PN+V Y  MI GL    + D+A  L L MEE    P+V+T+  +I GF +  +  K  
Sbjct: 746 CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805

Query: 543 ELLHKMKEKKVMPDASIVSIVVD 565
           EL  +M  K   P+    +++++
Sbjct: 806 ELFREMGSKGCAPNFVTYTVLIN 828



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 231/518 (44%), Gaps = 28/518 (5%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP 129
           F   L  + K +   + +      PN   YN +I+  C+            R+  +   P
Sbjct: 282 FAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  T+  L+ G   + ++     + + + A GC P+   +N+L++  C++     A  L 
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV------DKAKALFLQMKDENINPDVV 243
           ++M          CKP  V Y+ +I  +C  G +      + A+  + +M       + V
Sbjct: 402 KKMEKCE------CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
              S    LC    + +A ++  EMM  G  P   T++ ++  LC   +++ A  L   M
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              GV P+  TY  L+D F   G I +A      M   GC+   V+Y  LI+ Y K K+V
Sbjct: 516 KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV 575

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR----- 418
             A  L+  M++KG  P V+TY  L  G  +   +E A +++  M+ D    D       
Sbjct: 576 SVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKI 635

Query: 419 -----------TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
                      TY   +DGLCK   + +A +L  T+ +  CE +   Y+ LIDG CK+ +
Sbjct: 636 KNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAK 695

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L  A E+F  +      PNV TY+ +I  L  D ++D    +   M EN+ AP+++ +  
Sbjct: 696 LDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTE 755

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +I G  ++ +  +  +L+  M+EK   P+    + ++D
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMID 793



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 247/551 (44%), Gaps = 37/551 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+    +    DT       ++  GL  + +T        CK+G+      A
Sbjct: 239 PTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWRE---A 295

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              I +  F PN   +N +I GL   S   EA     ++++  C PNV TY  L+ G C 
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG-CL 354

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               +        M    G     C P+   +++++   CK      A  L  +M+    
Sbjct: 355 NKKQLGRCKRILSMMIAEG-----CYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC 409

Query: 239 NPDVVTYNSLIHGLCHAND------WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            P  V YN LI  +C   +      +  A++ + EM+  G   + V        LC   K
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK 469

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            ++A +++  M+  G  P+  TY+ ++   C   ++  A  LF  M+  G   D  +Y I
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI+ + K   +++A +   EMV  G +PTVVTY TL     +  +V  A +LF+ M   G
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLR----ILKCEL------------DIQAYN 456
              +  TYT  IDG CK+G I +A +++  +R    I   ++            ++  Y 
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYG 649

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L+DGLCK+ ++K A +L  ++      PN + Y+ +I G C   ++D+A+++F  M E+
Sbjct: 650 ALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEH 709

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              P+V T+  LI    +      V ++L KM E    P+  I + ++D L K   + ++
Sbjct: 710 GYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769

Query: 577 LPSFLVQERQG 587
               L+ E +G
Sbjct: 770 YKLMLMMEEKG 780



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 225/530 (42%), Gaps = 37/530 (6%)

Query: 70  FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
            N+L+    +N  ++       RL   G  P   TYN L+  F +  ++    +    + 
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
               + +  T     + L    +  EA +L  K       PN I YN +I+GLC      
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV---PNTILYNKMISGLCEASFFE 325

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A++    M + +      C PN  TY  ++ G   +  + + K +   M  E   P   
Sbjct: 326 EAMDFLNRMRSTS------CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYT 379

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM------DEAS 297
            +NSL+H  C ++D++ A +L  +M     +P  V +N+++  +C   ++      + A 
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +  + M+  G   N     +     C  GK  +A ++   M   G   D  +Y+ +I   
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    VE A  L++EM   G+ P V TY  L     +   ++ A    DEM RDG     
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TYTT I    K   +  A ELF  +    C  ++  Y  LIDG CKSG ++ A +++  
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 478 LPHGVLVP----------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +     +P                NVVTY  ++ GLC   ++  ARDL   M  +   P+
Sbjct: 620 MRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPN 679

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            I +D LI GF +  +  +  E+ HKM E    P+    S ++D L K++
Sbjct: 680 TIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDK 729



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 192/441 (43%), Gaps = 59/441 (13%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+ +  K K           + A G FPN+ TY  LI+ +CK G +      
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616

Query: 119 FGRILRSC----------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           + R+                      PN  T+ +L+ GL    ++ +A  L   +   GC
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGC 676

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV-------------------- 202
           EPN I Y+ LI+G C+      A  +F +M        V                     
Sbjct: 677 EPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLK 736

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN V Y+ +IDGL K    D+A  L L M+++   P+VVTY ++I G  
Sbjct: 737 VLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A   ++   LF EM  +G  P+ VT+ V+++  C    +DEA  LL+ M Q     +  
Sbjct: 797 KAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y  +++G+    +   +  L   +E  G     + Y +LI+ + K   +E AL L++E+
Sbjct: 857 SYCKVIEGY--KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEV 914

Query: 374 VSKGIKPTVVT--YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           +S  +        Y +L        ++ HA +LF +M RDGV  D  T+   + GL +  
Sbjct: 915 ISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVR 974

Query: 432 YIIEAVELFRTLRILKCELDI 452
              EA++L  +L    C++DI
Sbjct: 975 RWEEALQLSDSL----CQMDI 991


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 134/417 (32%), Positives = 231/417 (55%), Gaps = 6/417 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P ++ ++ L + + R GH    + L +E+      +G+  + +  + S +I+  C    V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEF----LGI--EQDIHSLSILINCFCHLHRV 113

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D   ++  ++    + P +VT+ +L++GLC     ++   L+ +M+ +G+QP+V T+NVI
Sbjct: 114 DFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVI 173

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++ L K+ K +EA   L  M + G  PN   Y+TL+DG+CL G+++ A  +F  M S GC
Sbjct: 174 INSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC 233

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +  +Y  L+NGYCK + +EEA+ L  E + KG+ P +VT+ T+  GL    +   A +
Sbjct: 234 TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           LF  +   G   +  TY   +DGLCK+G + EA  LF+ ++    + ++  Y  LID LC
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLC 353

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           K G++K   ELF  L    L PNV TY  ++  LC +G + +A  LF  MEE+   PD  
Sbjct: 354 KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKC 413

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            ++++I GF++  +PS   +L+ +M  +    DA+  +++ D    +  +LK+L  F
Sbjct: 414 AYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDFPTNDIPALKTLIGF 470



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 200/389 (51%), Gaps = 13/389 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A   F  ML   P P  V  F+ L +S+ +  HY+T       +   G+  ++++ +I
Sbjct: 44  DDALASFRLMLLRKPLPCIVE-FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSI 102

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC + RV  G     +IL+    P+  TF +L+ GL  E ++ +   L+  +   G
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +PNV TYN +IN L ++G    AL   ++M        V C PN V YST+IDG C  G
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEK------VGCVPNVVNYSTLIDGYCLRG 216

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+A+++F  M  +   P+V TY SL++G C      EA +L  E + +G+ P +VTF 
Sbjct: 217 QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFT 276

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+  LC+  +   A +L   +   G  PN  TY  L+DG C  G +  A  LF  M+  
Sbjct: 277 TIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS 336

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
             K + V Y ILI+  CK  ++++   L+  ++ +G+KP V TY  L   L +   +  A
Sbjct: 337 TVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEA 396

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            KLF +M+ DG   D   Y   I G  ++
Sbjct: 397 HKLFRKMEEDGCTPDKCAYNVIIQGFLQH 425



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 185/368 (50%), Gaps = 8/368 (2%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A A F  M      P +V ++ L   +     +     L  E+   G++  + + +++
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++  C   ++D    +L  +++ G+ P+  T+ TL++G C+ GK+++   L+  M   G 
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
           + +  +YN++IN   K+ +  EAL   ++M   G  P VV Y+TL  G     Q++ A  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGL 462
           +FD M   G   +  TYT+ ++G CK   I EAV+L   TLR      DI  +  +I GL
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR-KGLVPDIVTFTTIISGL 282

Query: 463 CKSGRLKFAWELF---CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           C++GR   A +LF   C+  H    PN++TY +++ GLC  G +++A  LF +M+ +   
Sbjct: 283 CRAGRPLAAQQLFRYICAHGH---TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVK 339

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
           P+++ + +LI    +  +     EL  ++ ++ + P+    + +V  L K  + +++   
Sbjct: 340 PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKL 399

Query: 580 FLVQERQG 587
           F   E  G
Sbjct: 400 FRKMEEDG 407



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 121/232 (52%), Gaps = 6/232 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G  PN+YTY  L+N +CKI R+          LR    P+  TF ++I GL    R +
Sbjct: 230 SKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPL 289

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  LF  + A G  PN++TY  L++GLC+ G+   A  LF+EM           KPN V
Sbjct: 290 AAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST------VKPNLV 343

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+ +ID LCK G +   K LF ++ DE + P+V TY +L+  LC      EA +LF +M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
            + G  P    +NVI+    +++    A +L++ MV RG   +A T   L D
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 35/244 (14%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K+ ++AL+ +R M+ +   P +V ++ LF  +  +   E  + L  E++  G+  D  + 
Sbjct: 41  KDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I+  C    +   + +   +  L  E  I  +  L++GLC  G++     L+  +  
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160

Query: 481 GVLVPNVVTYNI-----------------------------------MIQGLCNDGQMDK 505
             L PNV TYN+                                   +I G C  GQMD+
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           AR +F  M      P+V T+  L++G+ +I    +  +LL +   K ++PD    + ++ 
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 566 LLVK 569
            L +
Sbjct: 281 GLCR 284


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 261/545 (47%), Gaps = 37/545 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           I + M+    +P P S FN L+ S    K Y        R+   G  P    YNI I   
Sbjct: 164 IINMMMTEGCNPNP-SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 222

Query: 107 CKIGRV------SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           C   ++       L    +G +L +    N     +  + L    +  +A  L  ++   
Sbjct: 223 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+  TY+ +I  LC       A  LF+EM      +GV   P+  TY+ +ID  CK 
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKA 336

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A+ LF +M+    +P VVTY +LIH    A    +A  +F  M+D G +P+ VT+
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396

Query: 281 NVIMDELCKNRKMDEASRLLDLMV----------------QRGVRPNACTYNTLMDGFCL 324
             ++D LCK   + +A  +   ++                +  + PN  TY  L+DG C 
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 456

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K++ A EL  +M S GC+ + + Y+ LI+G+CK  +++ A  ++ +M   G  P+V T
Sbjct: 457 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 516

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   +F+  +++ A+K+  +M +D    +  TYT  IDGLC+ G   +A++L   + 
Sbjct: 517 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 576

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  LIDGL K+G++  + +LF  +      PN VTY ++I  LC  G +D
Sbjct: 577 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 636

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KAR L  +M++      +  +   I GF +    S    +L +M+    +P A +  +++
Sbjct: 637 KARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL--GILEEMESYGTVPIAPVYGMLI 694

Query: 565 DLLVK 569
           D   K
Sbjct: 695 DCFSK 699



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 235/477 (49%), Gaps = 24/477 (5%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P++YTY ILI+ FCK G +      F  +     +P   T+ +LI       +
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA----NGNGEIGVV 202
           + +A  +F ++   GC PN +TY  L++GLC+ G+   A  ++ ++     + + +    
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 203 CK------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           C+      PN VTY  ++DGLCK   VD A  L   M      P+ + Y++LI G C A 
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             + A+ +F++M   G  PSV T+  ++D + K+ ++D A ++L  M++    PN  TY 
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++DG C +G+  +A +L   ME  GC  + V+Y  LI+G  K  +++ +L L+ +M  K
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY---- 432
           G  P  VTY  L   L     ++ A  L  EM++       + Y   I G  K+      
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG 673

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---FCSLPHGVLVPNVVT 489
           I+E +E + T+ I         Y  LID   K+GRL+ A EL      +P  V   N + 
Sbjct: 674 ILEEMESYGTVPI------APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM- 726

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           Y  +IQ LC   Q+++A  L+ +M      P++  F  LI G + + +  +  +L +
Sbjct: 727 YASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 246/589 (41%), Gaps = 101/589 (17%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+  TYN L+      G+V LGF     +  S F  +  T       L  E R  +A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  + + F  +  + T+  +I+GL    +   A++    M   +      C PN VTY
Sbjct: 95  LDMIER-EDFKLDTVLCTH--MISGLMEASYFDEAMSFLHRMRCNS------CIPNVVTY 145

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T++ G  K+  +   K +   M  E  NP+   +NSL+H  C+  D+  A +L   M  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 271 QGVQPSVVTFNVIMDELCKNRKM------------------------------------- 293
            G  P  V +N+ +  +C   K+                                     
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 265

Query: 294 ----DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
               D+A +L+  M+++G  P+  TY+ ++   C   K+ +A  LF  M+ +G   D  +
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y ILI+ +CK   +E+A  L+ EM S G  PTVVTY  L     +  QV  A  +F  M 
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------RILKCE------LDIQ 453
             G   +  TY   +DGLCK G I +A E++  L              CE       ++ 
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  L+DGLCK+ ++  A EL  ++      PN + Y+ +I G C  G++D A+++FL M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505

Query: 514 E-----------------------------------ENAAAPDVITFDMLIHGFIRINEP 538
                                               +++  P+V+T+  +I G  RI E 
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 565

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            K  +LL  M+EK   P+    + ++D L K      SL  F    R+G
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 184/435 (42%), Gaps = 86/435 (19%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+ +  K K          R+   G  PN  TY  L++  CK G +S  F  
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 119 FGRIL----------------RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           + +++                R    PN  T+ +L+ GL    ++  A  L   + + GC
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMAN------------------GNGEIGVV-- 202
           EPN I Y+ LI+G C+ G    A  +F +M                     +G + +   
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN VTY+ +IDGLC+ G  +KA  L   M+++  +P+VVTY +LI GL 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR------- 306
            A   + +  LF +M  +G  P+ VT+ V+++ LC    +D+A  LL  M Q        
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 307 --------------------------GVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
                                     G  P A  Y  L+D F   G++  A EL   M  
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 341 M--GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +    K D+  Y  LI   C   +VEEA  LY EM  +G  P +  +  L  GL E+ + 
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 399 EHALKLFDEMQRDGV 413
           + AL+L   +  +GV
Sbjct: 776 DEALQLCYGICHEGV 790



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 154/376 (40%), Gaps = 40/376 (10%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +KD    P  VTYN+L+  L  A   +   R+  EM + G      T       LCK  +
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 293 --------------------------------MDEASRLLDLMVQRGVRPNACTYNTLMD 320
                                            DEA   L  M      PN  TY TL+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GF    ++   + +   M + GC  +   +N L++ YC  K+   A  L   M + G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 381 TVVTYNTLFLG-------LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             V YN +F+G       L     ++ A K++ EM       +      F   LC  G  
Sbjct: 211 GYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A +L + +       D   Y+ +I  LC + +++ A+ LF  +    + P+V TY I+
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I   C  G +++A+ LF +M     +P V+T+  LIH +++  +  + N++ H+M +   
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 554 MPDASIVSIVVDLLVK 569
            P+      +VD L K
Sbjct: 390 RPNDVTYGALVDGLCK 405


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 253/535 (47%), Gaps = 17/535 (3%)

Query: 45  ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLY 97
           + P  A  + D +       P   S+N +LA+ A+          Y   ++   + P  +
Sbjct: 114 LAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTF 173

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T++I     C++GR          + R    P+   + ++I  L A+  + EAA L  ++
Sbjct: 174 TFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM 233

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              GC  +V T+N +++GLC  G    A  L + M          C PN +TY  ++ GL
Sbjct: 234 FLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRG------CVPNAITYGFLLKGL 287

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C    V++A+ +  ++ + N    VV +N++I          EA  L+  M  +G  P  
Sbjct: 288 CLASQVEEARTMLGRVPELN----VVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDA 343

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+++++  LCK  ++  A +LL  M  +G  P+  TY  L+  FC  G  +    +   
Sbjct: 344 HTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEV 403

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G   +   YN +I   CK++ +++A+   +EM S+G KP + TYNT+   L   +Q
Sbjct: 404 MSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQ 463

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  LF+ +  +GV A+  TY T I  L +NG   +A+ L   + +  C LDI +YN 
Sbjct: 464 MEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNG 523

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI  LC+ G +  +  L   +    + PN V+YN++I  LC   ++  A +L  +M    
Sbjct: 524 LIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQE 583

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
             PD++T++ LI+G  ++        LL K+  + V  D    +I++    K  +
Sbjct: 584 LTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARL 638



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 240/523 (45%), Gaps = 43/523 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNIL 102
           +   ++  M+     PP   +F+I   +L +    D  L         G  P+   Y  +
Sbjct: 154 DVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTV 213

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C  G V+        +     + +  TFN ++ GL    R+ EAA L  ++   GC
Sbjct: 214 IHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGC 273

Query: 163 EPNVITYNTLINGLC-----RTGHTMI--------------------------ALNLFEE 191
            PN ITY  L+ GLC         TM+                          A  L+E 
Sbjct: 274 VPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYET 333

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M +        C P+  TYS +I GLCK G +  A  L  +M+D+   P +VTY  L+H 
Sbjct: 334 MGSKG------CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHS 387

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
            C    W+  + +   M D+G+  ++  +N ++  +CK+R+MD+A R +  M  +G +P+
Sbjct: 388 FCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPD 447

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
            CTYNT++   C   ++  AE LF ++   G   + ++YN LI+   +N   ++A+SL  
Sbjct: 448 ICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLAN 507

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           +MV  G    +V+YN L   L     V+ ++ L  EM   G+  +  +Y   I  LCK  
Sbjct: 508 DMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTR 567

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + +A+EL + +   +   DI  YN LI+GLCK G +  A  L   L +  +  +++TYN
Sbjct: 568 RVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYN 627

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           I+I   C    +  A  L      +   P+  T+ +++  F+R
Sbjct: 628 ILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 264/509 (51%), Gaps = 57/509 (11%)

Query: 25  FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
           FS   + +R++  R G ++ I  ++AF +F  M   +P P  V  FN +L ++AK + YD
Sbjct: 46  FSGTTIDYREVL-RSG-LHNIKFDDAFHLFVLMAYSYPLPSIVE-FNKVLTAIAKMQMYD 102

Query: 85  TRLN-------ATGL--FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFN 135
             +N       A G+   P+LYT NIL+NCFC+                 CF P++A   
Sbjct: 103 VVINLWKRIENAEGIEISPDLYTCNILVNCFCR-----------------CFQPSSAL-- 143

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
                           +   K+   G EP+++T ++L+NG C +     A+ +  +M   
Sbjct: 144 ----------------SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME-- 185

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
             ++G+  K + V  + +ID LCK   V  A  +  +MKD  I+P+VVTY+SLI GLC +
Sbjct: 186 --KMGI--KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKS 241

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
               +A+R   EM  + + P+V+TF+ ++D   K  K+ +   +  +M+Q  + PN  TY
Sbjct: 242 GRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 301

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           ++L+ G C+  +++ A ++   M S GC  + V+Y+ L NG+ K+  V++ + L  +M  
Sbjct: 302 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 361

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G+    V+ NTL  G F+  +++ AL +F  M  +G+  + R+Y   + GL  NG + +
Sbjct: 362 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 421

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A+  F  ++  + +LDI  Y  +I G+CK+  +K A++LF  L    + P+   Y IMI 
Sbjct: 422 ALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 481

Query: 496 GLCNDGQMDKARDL--FLD--MEENAAAP 520
            L   G   +A  L  F    + +N +AP
Sbjct: 482 ELNRAGMRTEADALNRFYQKHVRQNESAP 510



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 224/428 (52%), Gaps = 4/428 (0%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L  GLH   +  +A  LF  +      P+++ +N ++  + +     + +NL++ + N  
Sbjct: 57  LRSGLH-NIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAE 115

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           G   +   P+  T + +++  C+      A +   +M    I PD+VT +SL++G C +N
Sbjct: 116 G---IEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSN 172

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A  +  +M   G++  VV   +++D LCKNR +  A  +L  M  RG+ PN  TY+
Sbjct: 173 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 232

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +L+ G C  G++  AE     M+S     + ++++ LI+ Y K  ++ +  S+Y+ M+  
Sbjct: 233 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQM 292

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            I P V TY++L  GL   ++V+ A+K+ D M   G   +  TY+T  +G  K+  + + 
Sbjct: 293 SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDG 352

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           ++L   +       +  + N LI G  ++G++  A  +F  +    L+PN+ +YNI++ G
Sbjct: 353 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 412

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L  +G+++KA   F  M++     D+IT+ ++IHG  +     +  +L +K+K K+V PD
Sbjct: 413 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 472

Query: 557 ASIVSIVV 564
               +I++
Sbjct: 473 FKAYTIMI 480



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 182/378 (48%), Gaps = 5/378 (1%)

Query: 207 TVTYSTII-DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           T+ Y  ++  GL    F D A  LF+ M      P +V +N ++  +     ++    L+
Sbjct: 50  TIDYREVLRSGLHNIKF-DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLW 108

Query: 266 IEMMD-QGVQ--PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
             + + +G++  P + T N++++  C+  +   A   L  M++ G+ P+  T ++L++GF
Sbjct: 109 KRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGF 168

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           CL   I  A  + G ME MG K D V   ILI+  CKN+ V  AL + + M  +GI P V
Sbjct: 169 CLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNV 228

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY++L  GL +  ++  A +   EM    +  +  T++  ID   K G + +   +++ 
Sbjct: 229 VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKM 288

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +  +  + ++  Y+ LI GLC   R+  A ++   +      PNVVTY+ +  G     +
Sbjct: 289 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 348

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D    L  DM +   A + ++ + LI G+ +  +      +   M    ++P+    +I
Sbjct: 349 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 408

Query: 563 VVDLLVKNEISLKSLPSF 580
           V+  L  N    K+L  F
Sbjct: 409 VLAGLFANGEVEKALSRF 426


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 261/545 (47%), Gaps = 37/545 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           I + M+    +P P S FN L+ S    K Y        R+   G  P    YNI I   
Sbjct: 99  IINMMMTEGCNPNP-SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 157

Query: 107 CKIGRV------SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           C   ++       L    +G +L +    N     +  + L    +  +A  L  ++   
Sbjct: 158 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 217

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+  TY+ +I  LC       A  LF+EM      +GV   P+  TY+ +ID  CK 
Sbjct: 218 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKA 271

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A+ LF +M+    +P VVTY +LIH    A    +A  +F  M+D G +P+ VT+
Sbjct: 272 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 331

Query: 281 NVIMDELCKNRKMDEASRLLDLMV----------------QRGVRPNACTYNTLMDGFCL 324
             ++D LCK   + +A  +   ++                +  + PN  TY  L+DG C 
Sbjct: 332 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 391

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K++ A EL  +M S GC+ + + Y+ LI+G+CK  +++ A  ++ +M   G  P+V T
Sbjct: 392 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 451

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   +F+  +++ A+K+  +M +D    +  TYT  IDGLC+ G   +A++L   + 
Sbjct: 452 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 511

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  LIDGL K+G++  + +LF  +      PN VTY ++I  LC  G +D
Sbjct: 512 EKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLD 571

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           KAR L  +M++      +  +   I GF +    S    +L +M+    +P A +  +++
Sbjct: 572 KARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL--GILEEMESYGTVPIAPVYGMLI 629

Query: 565 DLLVK 569
           D   K
Sbjct: 630 DCFSK 634



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 234/505 (46%), Gaps = 30/505 (5%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFT----PNAATFNSLIKGL 141
           R+      PN+ TY  L++ F K  +  LG+    RI+    T    PN + FNSL+   
Sbjct: 67  RMRCNSCIPNVVTYRTLLSGFLK--KKQLGWCK--RIINMMMTEGCNPNPSLFNSLVHSY 122

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-IG 200
             E     A  L  ++   GC P  + YN  I  +C     + + +L +      GE + 
Sbjct: 123 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLDLAEKIYGEMLA 181

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C  N V  +     LC  G  DKA  L  +M  +   PD  TY+ +I  LCHA    +
Sbjct: 182 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 241

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  LF EM   GV P V T+ +++D  CK   +++A  L + M   G  P   TY  L+ 
Sbjct: 242 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 301

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--- 377
            +    ++ +A ++F  M   GC+ +DV+Y  L++G CK   + +A  +Y +++      
Sbjct: 302 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 361

Query: 378 -------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
                        + P VVTY  L  GL + H+V+HA +L D M   G   +   Y   I
Sbjct: 362 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 421

Query: 425 DGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           DG CK G I  A E+F  L++ KC     +  Y  LID + K GRL  A ++   +    
Sbjct: 422 DGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 479

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             PNVVTY  MI GLC  G+ +KA  L   MEE   +P+V+T+  LI G  +  +     
Sbjct: 480 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 539

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLL 567
           +L  +M  K   P+     ++++ L
Sbjct: 540 DLFTQMSRKGCSPNYVTYRVLINHL 564



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 238/485 (49%), Gaps = 24/485 (4%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            +   G+ P++YTY ILI+ FCK G +      F  +     +P   T+ +LI       
Sbjct: 248 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 307

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA----NGNGEIGV 201
           ++ +A  +F ++   GC PN +TY  L++GLC+ G+   A  ++ ++     + + +   
Sbjct: 308 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYF 367

Query: 202 VCK------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
            C+      PN VTY  ++DGLCK   VD A  L   M      P+ + Y++LI G C A
Sbjct: 368 PCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 427

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
              + A+ +F++M   G  PSV T+  ++D + K+ ++D A ++L  M++    PN  TY
Sbjct: 428 GKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTY 487

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             ++DG C +G+  +A +L   ME  GC  + V+Y  LI+G  K  +++ +L L+ +M  
Sbjct: 488 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 547

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY--- 432
           KG  P  VTY  L   L     ++ A  L  EM++       + Y   I G  K+     
Sbjct: 548 KGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL 607

Query: 433 -IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---FCSLPHGVLVPNVV 488
            I+E +E + T+ I         Y  LID   K+GRL+ A EL      +P  V   N +
Sbjct: 608 GILEEMESYGTVPI------APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDM 661

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            Y  +IQ LC   Q+++A  L+ +M      P++  F  LI G + + +  +  +L + +
Sbjct: 662 -YASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 720

Query: 549 KEKKV 553
             + V
Sbjct: 721 CHEGV 725



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 203/477 (42%), Gaps = 92/477 (19%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C PN VTY T++ G  K+  +   K +   M  E  NP+   +NSL+H  C+  D+  A 
Sbjct: 73  CIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAY 132

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKM----------------------------- 293
           +L   M   G  P  V +N+ +  +C   K+                             
Sbjct: 133 KLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 192

Query: 294 ------------DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
                       D+A +L+  M+++G  P+  TY+ ++   C   K+ +A  LF  M+ +
Sbjct: 193 NFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV 252

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  +Y ILI+ +CK   +E+A  L+ EM S G  PTVVTY  L     +  QV  A
Sbjct: 253 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 312

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------RILKCE-- 449
             +F  M   G   +  TY   +DGLCK G I +A E++  L              CE  
Sbjct: 313 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 372

Query: 450 ----LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++  Y  L+DGLCK+ ++  A EL  ++      PN + Y+ +I G C  G++D 
Sbjct: 373 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 432

Query: 506 ARDLFLDME-----------------------------------ENAAAPDVITFDMLIH 530
           A+++FL M                                    +++  P+V+T+  +I 
Sbjct: 433 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 492

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           G  RI E  K  +LL  M+EK   P+    + ++D L K      SL  F    R+G
Sbjct: 493 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 184/435 (42%), Gaps = 86/435 (19%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+ +  K K          R+   G  PN  TY  L++  CK G +S  F  
Sbjct: 291 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350

Query: 119 FGRIL----------------RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           + +++                R    PN  T+ +L+ GL    ++  A  L   + + GC
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMAN------------------GNGEIGVV-- 202
           EPN I Y+ LI+G C+ G    A  +F +M                     +G + +   
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 470

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN VTY+ +IDGLC+ G  +KA  L   M+++  +P+VVTY +LI GL 
Sbjct: 471 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR------- 306
            A   + +  LF +M  +G  P+ VT+ V+++ LC    +D+A  LL  M Q        
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590

Query: 307 --------------------------GVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
                                     G  P A  Y  L+D F   G++  A EL   M  
Sbjct: 591 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650

Query: 341 M--GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +    K D+  Y  LI   C   +VEEA  LY EM  +G  P +  +  L  GL E+ + 
Sbjct: 651 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 710

Query: 399 EHALKLFDEMQRDGV 413
           + AL+L   +  +GV
Sbjct: 711 DEALQLCYGICHEGV 725


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 228/444 (51%), Gaps = 23/444 (5%)

Query: 90  TGLF-PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
            GLF PN +TYN+LI  FCK G++      F  +  S   PNA+T N+L+ GL    ++ 
Sbjct: 18  AGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMS 77

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  LF +++A    P   ++N L+ G    G    A+  F+EM     E      P+  
Sbjct: 78  SALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVE------PDLE 128

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +Y  ++  L   G + +A ALF  M     +PD++TYN L+ G C      EA+ L  E+
Sbjct: 129 SYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 185

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G +P+V T+++I++  CK  K++EA  +   M++    PNA T+NTL+ GFC  G +
Sbjct: 186 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 245

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKGIKPTVVTYNT 387
             A +LF  ME +GCK   V+YN LI+  CK +  V  A+ L+ ++   G+ PT+VTYN+
Sbjct: 246 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 305

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  E  +    L+L   M  +G   D  TY   I GLC    + +A  LF     + 
Sbjct: 306 LIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG---MA 360

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C  ++  +N LI GLC   +++ A  +   +      P++ T+N +I   C  G M  AR
Sbjct: 361 CAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAR 416

Query: 508 DLFLDMEENAAAPDVITFDMLIHG 531
           ++  DM ++   P+  T   L HG
Sbjct: 417 EVMKDMLKHGFYPNTYTTYALAHG 440



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/442 (31%), Positives = 220/442 (49%), Gaps = 53/442 (11%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  LF ++ A    PN  TYN LI G C+ G    A+++F +M +     G++  PN  
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS----GLL--PNAS 61

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T +T++ GLC+ G +  A  LF +M+     P   ++N L+ G   A     A   F EM
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMA---GRAIEFFKEM 118

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              GV+P + ++++++  L  + +M EA  L   M      P+  TYN LMDG+C +G+ 
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 175

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ L   +   G + +  +Y+I+IN YCK  +VEEA  ++ +M+     P  VT+NTL
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 235

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN-GYIIEAVELFRT----- 442
             G  +   +E A+KLF EM++ G  A   TY T ID LCK  G +  AV+LF       
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 295

Query: 443 ----------------------LRIL------KCELDIQAYNCLIDGLCKSGRLKFAWEL 474
                                 LR+L       C+ D+  YNCLI GLC + R++ A  L
Sbjct: 296 LTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 355

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +      PNV T+N +I+GLC   ++++AR++   M     APD+ TF+ +I  F +
Sbjct: 356 FNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCK 408

Query: 535 INEPSKVNELLHKMKEKKVMPD 556
                   E++  M +    P+
Sbjct: 409 AGAMHDAREVMKDMLKHGFYPN 430



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 216/441 (48%), Gaps = 30/441 (6%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N+L+    K           + + ++GL PN  T N L+   C+IG++S     
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +    F P +A+ N L++G     R +E    F ++KA G EP++ +Y+ L++ L  
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKASGVEPDLESYHILLSALSD 139

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    A  LF  M          C P+ +TY+ ++DG CK G   +A++L  ++     
Sbjct: 140 SGRMAEAHALFSAM---------TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 190

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+V TY+ +I+  C  +   EA  +F++M++    P+ VTFN ++   CK   +++A +
Sbjct: 191 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 250

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFC-LMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           L   M + G +    TYNTL+D  C   G +  A +LF  +E  G     V+YN LI G+
Sbjct: 251 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 310

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
             ++   + L L   M ++G KP V+TYN L  GL   ++VE A +LF+ M     A + 
Sbjct: 311 --SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNV 365

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+   I GLC    + EA  +   +       D+  +N +I   CK+G +  A E+   
Sbjct: 366 TTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKD 421

Query: 478 -LPHGVLVPNVVTYNIMIQGL 497
            L HG   PN  T   +  G+
Sbjct: 422 MLKHG-FYPNTYTTYALAHGI 441



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 159/301 (52%), Gaps = 26/301 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNIL 102
           EA  +F  M       P + ++N+L+    K  + Y+ +     +   G  PN++TY+I+
Sbjct: 145 EAHALFSAM----TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 200

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           INC+CK+ +V   +  F +++ S   PNA TFN+LI G      + +A  LF +++  GC
Sbjct: 201 INCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGC 260

Query: 163 EPNVITYNTLINGLCRT-GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           +  ++TYNTLI+ LC+  G    A++LF ++       G    P  VTY+++I G  +  
Sbjct: 261 KATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE------GAGLTPTIVTYNSLIQGFSERA 314

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             +    L   M  E   PDV+TYN LI GLC AN   +A+RLF  M      P+V TFN
Sbjct: 315 --NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFN 369

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  LC  +K++EA  +LD M      P+  T+NT++  FC  G ++ A E+   M   
Sbjct: 370 FLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKH 425

Query: 342 G 342
           G
Sbjct: 426 G 426



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 167/361 (46%), Gaps = 44/361 (12%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A  LF ++      P+  TYN LI G C     ++A  +F +M   G+ P+  T N +
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG- 342
           +  LC+  +M  A +L   M      P + ++N L+ GF + G   RA E F  M++ G 
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGV 123

Query: 343 -------------------------------CKHDDVSYNILINGYCKNKEVEEALSLYR 371
                                          C  D ++YN+L++GYCK  +  EA SL +
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMK 183

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           E++  G +P V TY+ +     ++ +VE A ++F +M       +  T+ T I G CK G
Sbjct: 184 EILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 243

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS-GRLKFAWELFCSLPHGVLVPNVVTY 490
            + +A++LF  +  + C+  I  YN LID LCK  G +  A +LF  L    L P +VTY
Sbjct: 244 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTY 303

Query: 491 NIMIQGL---CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           N +IQG     NDG       L   M      PDVIT++ LI G    N       L + 
Sbjct: 304 NSLIQGFSERANDG-----LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358

Query: 548 M 548
           M
Sbjct: 359 M 359



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 144/275 (52%), Gaps = 6/275 (2%)

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           A   ++A RLF E++     P+  T+NV++   CK  +M +A  +   M   G+ PNA T
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
            NTL+ G C +G+++ A +LF  M++        S+NIL+ G+        A+  ++EM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM---AGRAIEFFKEMK 119

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           + G++P + +Y+ L   L +  ++  A  LF  M     + D  TY   +DG CK G   
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EA  L + +     E ++  Y+ +I+  CK  +++ AWE+F  +     VPN VT+N +I
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            G C  G ++ A  LF +ME+      ++T++ LI
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLI 271



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 146/281 (51%), Gaps = 10/281 (3%)

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
           RK D+A RL   ++     PNA TYN L+ GFC  G++++A  +F  M+S G   +  + 
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N L+ G C+  ++  AL L+REM +    PT  ++N L  G F       A++ F EM+ 
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF---MAGRAIEFFKEMKA 120

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            GV  D  +Y   +  L  +G + EA  LF     + C  DI  YN L+DG CK G+   
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSA---MTCSPDIMTYNVLMDGYCKIGQTYE 177

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  L   +      PNV TY+I+I   C   ++++A ++F+ M E+   P+ +TF+ LI 
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVS--IVVDLLVK 569
           GF +        +L  +M  +K+   A+IV+   ++D L K
Sbjct: 238 GFCKAGMLEDAIKLFAEM--EKIGCKATIVTYNTLIDSLCK 276



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 131/239 (54%), Gaps = 6/239 (2%)

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN+LI G+CK  ++ +A+S++ +M S G+ P   T NTL LGL EI Q+  ALKLF EM
Sbjct: 27  TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM 86

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           Q       + ++   + G    G    A+E F+ ++    E D+++Y+ L+  L  SGR+
Sbjct: 87  QAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDSGRM 143

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A  LF ++      P+++TYN+++ G C  GQ  +A+ L  ++ +    P+V T+ ++
Sbjct: 144 AEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 200

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           I+ + ++++  +  E+  KM E   +P+A   + ++    K  +   ++  F   E+ G
Sbjct: 201 INCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 259


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 249/525 (47%), Gaps = 48/525 (9%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           TR N   + PN+ ++N LIN   K   V +    F R        N  T+  +IK L  +
Sbjct: 180 TRKNVV-ILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKK 238

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
                   +F ++K  G + +   Y T I GLC+   + +   + ++    N  +     
Sbjct: 239 GDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHV----- 293

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
            +   Y+ +I G C E  +D+A+++FL+M+ + + PDV  Y +L+HG C++ ++++A  +
Sbjct: 294 -HKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAV 352

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           +  M+ +G++ + V F+ I+  L +  +  E   + +   + G+  +   YN L D  C 
Sbjct: 353 YKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCK 412

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +GK++ A  +   ++SM    D   Y  LINGY    +  EA SL++EM  +G KP VV 
Sbjct: 413 LGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVA 472

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L  G F       A+ L + M+  GV  ++ T+   I+GLC  G + EA E F  L+
Sbjct: 473 YNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLK 532

Query: 445 ILKCELDIQAYNCLIDGLCKS--------------------------------------- 465
               E+ ++ Y  L++G C++                                       
Sbjct: 533 GESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALC 592

Query: 466 --GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G ++ A  LF    H    P+ VTY IMI G C    + +A +LF DM+E    PD +
Sbjct: 593 CNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAV 652

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           T+ ++I+G+ ++N   + +EL   MKE+ + PD    ++++  L+
Sbjct: 653 TYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLL 697



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 242/536 (45%), Gaps = 84/536 (15%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIG-------- 110
           P + SFN L+  L K+   D       R  + GL  N YTY I+I   CK G        
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247

Query: 111 ---------------------------RVSLGFIAFGRILRSCFTPNAA----TFNSLIK 139
                                      R  LG+     +L+   T NA      + ++I+
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGY----AVLQDYRTRNAHVHKYAYTAVIR 303

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN--- 196
           G   E+++ EA ++F +++  G  P+V  Y  L++G C + +   AL +++ M +     
Sbjct: 304 GFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKT 363

Query: 197 ------------GEIGVVCKP--------------NTVTYSTIIDGLCKEGFVDKAKALF 230
                        E+G   +               +   Y+ + D LCK G VD A  + 
Sbjct: 364 NCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGML 423

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            ++K   ++ D+  Y +LI+G        EA+ LF EM ++G +P VV +NV+     +N
Sbjct: 424 DELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRN 483

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
           R   EA  LL+ M  +GV PN+ T+  +++G C  GK+  AEE F  ++    +     Y
Sbjct: 484 RTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIY 543

Query: 351 NILINGYC------KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
             L+NGYC      K+ E++EA  L R M+   +KP+ V Y+ +F  L     +E A  L
Sbjct: 544 TALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTL 603

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F+     G   D  TYT  I+G CK   + EA ELF+ ++      D   Y  +I+G CK
Sbjct: 604 FNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCK 663

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
              L+ A ELF  +    + P+V+ Y ++I+GL N G  + A  L+ +M +    P
Sbjct: 664 MNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTP 719



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 235/537 (43%), Gaps = 45/537 (8%)

Query: 37  TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNL 96
           T+   I+   PN  F I   +     +P    S+   L    KN+H        G   N+
Sbjct: 49  TKPSKISSFEPN-TFKILQKLYLYQNNPSLAYSYFTQL----KNQH--------GFSHNI 95

Query: 97  YTYNILINCFC------KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
            TY  +I   C      K+  + L  I   +    CF  N   F+SL +G+   + + E 
Sbjct: 96  QTYTSIIRILCYYNLDRKLDSLFLDIIDHSK-QDPCFEINV-LFDSLFEGV---NDVNED 150

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG--NGEIGVVCKPNTV 208
             LF                   NG  +     ++ N+F E  +        VV  PN +
Sbjct: 151 HYLFNAF----------------NGFVKA---CVSQNMFVEAIDFLLQTRKNVVILPNIL 191

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +++ +I+ L K   VD A  LF++ K   +  +  TY  +I  LC   DW    R+F EM
Sbjct: 192 SFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEM 251

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            + GV      +   ++ LCKN + D    +L     R    +   Y  ++ GFC   K+
Sbjct: 252 KEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKL 311

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + AE +F  ME  G   D   Y  L++GYC ++  ++AL++Y+ M+S+GIK   V ++ +
Sbjct: 312 DEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCI 371

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L E+ +    + +F+E +  G+  D + Y    D LCK G + +AV +   L+ ++ 
Sbjct: 372 LHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQL 431

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           ++D++ Y  LI+G    G+   A  LF  +      P+VV YN++  G   +    +A D
Sbjct: 432 DVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMD 491

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           L   ME     P+  T  ++I G     +  +  E  + +K + V     I + +V+
Sbjct: 492 LLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVN 548



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 198/473 (41%), Gaps = 69/473 (14%)

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
           +K+ +F  EPN  T+  L        +  +A + F ++ N +G        N  TY++II
Sbjct: 52  SKISSF--EPN--TFKILQKLYLYQNNPSLAYSYFTQLKNQHG-----FSHNIQTYTSII 102

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-NDWNE------------- 260
             LC      K  +LFL + D +        N L   L    ND NE             
Sbjct: 103 RILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNAFNGFVK 162

Query: 261 ---AKRLFIEMMDQGVQ--------PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
              ++ +F+E +D  +Q        P++++FN +++ L K+ ++D A  L       G+ 
Sbjct: 163 ACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLI 222

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-------- 361
            N  TY  ++   C  G       +F  M+  G   D   Y   I G CKN         
Sbjct: 223 FNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAV 282

Query: 362 ---------------------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
                                      +++EA S++ EM  +G+ P V  Y  L  G   
Sbjct: 283 LQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCN 342

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
               + AL ++  M   G+  +   ++  +  L + G  +E V++F   +     +D +A
Sbjct: 343 SRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKA 402

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L D LCK G++  A  +   L    L  ++  Y  +I G    G+  +A+ LF +ME
Sbjct: 403 YNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEME 462

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           E    PDV+ +++L  GF R     +  +LL+ M+ + V P+++   I+++ L
Sbjct: 463 ERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGL 515



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 155/346 (44%), Gaps = 13/346 (3%)

Query: 226 AKALFLQMKDEN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           A + F Q+K+++  + ++ TY S+I  LC+ N   +   LF++++D   Q      NV+ 
Sbjct: 78  AYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLF 137

Query: 285 DELCKN-RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           D L +    ++E   L +     G      + N  ++    + +  +   +  ++     
Sbjct: 138 DSLFEGVNDVNEDHYLFNAF--NGFVKACVSQNMFVEAIDFLLQTRKNVVILPNI----- 190

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
               +S+N LIN   K+ EV+ AL L+    S G+     TY  +   L +    E+ ++
Sbjct: 191 ----LSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVR 246

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +FDEM+  GV  D+  Y TFI+GLCKN        + +  R     +   AY  +I G C
Sbjct: 247 VFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFC 306

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
              +L  A  +F  +    LVP+V  Y  ++ G CN    DKA  ++  M       + +
Sbjct: 307 NETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCV 366

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            F  ++H    +    +V ++  + KE  +  D    +I+ D L K
Sbjct: 367 IFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCK 412



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 19/278 (6%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYN 100
           P EA  +F  M       P V ++N+L A   +N+           + + G+ PN  T+ 
Sbjct: 451 PIEAQSLFKEM-EERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHK 509

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG------LHAESRIMEAAALF 154
           I+I   C  G+V      F  +       +   + +L+ G      +     + EA  L 
Sbjct: 510 IIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILL 569

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +     +P+ + Y+ +   LC  G+   A  LF      N  I     P+ VTY+ +I
Sbjct: 570 RTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLF------NLFIHTGFTPDAVTYTIMI 623

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G CK   + +A  LF  MK+  I PD VTY  +I+G C  N   EA  LF +M ++G++
Sbjct: 624 NGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIK 683

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           P V+ + VI+  L  +   + A +L + M+  G+ P A
Sbjct: 684 PDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGA 721


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 264/548 (48%), Gaps = 43/548 (7%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++  L+  L K+   D       ++   G  PN+ TY  LI+  CK  R         
Sbjct: 10  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 69

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R+LRS   P+  T+NSLI GL   +R+ +A  +  +L   G  PN ITY+TL+   CR  
Sbjct: 70  RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRR 129

Query: 181 HTMIALNLFEEM-------------------------------ANGNGEIGVVCKPNTVT 209
               A  L  EM                                +G+  I     P+ VT
Sbjct: 130 RLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVT 189

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T I GLCK G +DK   +  +M    I PDVVT+ S+I GLC AN  ++A ++F  M+
Sbjct: 190 YNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGML 249

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM--VQRGVRPNACTYNTLMDGFCLMGK 327
           ++G  P  +T+++++D L +  ++D    +L+ M  ++ G      T+N  +   C  GK
Sbjct: 250 ERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGK 309

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KPTVVTYN 386
              A+ +   M   G   + +SYN +I+G CK+  V++A  L R+M+  G  KP V+ +N
Sbjct: 310 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 369

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAA-DTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           TL  G  +  ++  A +L  EM+   +   D  TY T IDG  K G + +A  L + ++ 
Sbjct: 370 TLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQA 429

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           + C+ ++  Y  LI+G  K G  + A  LF  +      P+++TYN ++      G M K
Sbjct: 430 VGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSK 489

Query: 506 ARDLFLDMEENAA--APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           A  ++  ++   +  +PD IT+ +LI G+ R  +  +   LL +M  +    D+   +++
Sbjct: 490 AEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVL 549

Query: 564 VDLLVKNE 571
           +  L + E
Sbjct: 550 IAKLAETE 557



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 235/444 (52%), Gaps = 14/444 (3%)

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           + A G + +V+TY TLI+GLC++G    A  L ++MA+        C PN VTY+ +IDG
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG------CAPNVVTYTALIDG 54

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK      A     +M      PD+VTYNSLIHGLC AN  ++A  +  E++  G  P+
Sbjct: 55  LCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPN 114

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC-LMGKINRAEELF 335
            +T++ ++   C+ R++D+A  L+  M+ RG   N   Y   + GFC    + +R E   
Sbjct: 115 HITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD 174

Query: 336 G-SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           G  M   G   D V+YN  I+G CK  ++++ L +  EM   GI P VVT+ ++  GL +
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK--CELDI 452
            ++++ A ++F  M   G   D+ TY+  +D L +   +    E+   ++ +K  C +++
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             +N  I  LC+SG+   A  +   +     +PN+++YN +I GLC  G +D A  L   
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 513 M-EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV-MPDASIVSIVVDLLVKN 570
           M +     PDVI F+ LI GF +    S+ ++LL +MK K + +PD    + ++D   K 
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414

Query: 571 EISLKSLPSFLVQERQGEVGESNV 594
             SLK     L+QE Q    + NV
Sbjct: 415 G-SLKQ-AKLLLQEMQAVGCKPNV 436



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 158/541 (29%), Positives = 255/541 (47%), Gaps = 51/541 (9%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A G   ++ TY  LI+  CK G +        ++  +   PN  T+ +LI GL    R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A     ++   GCEP+++TYN+LI+GLC       A  + +E+   NG       PN
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVR-NG-----FAPN 114

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQM--------------------------------- 233
            +TYST++   C+   +D+A+ L  +M                                 
Sbjct: 115 HITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD 174

Query: 234 KDENIN----PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
            DE I     PDVVTYN+ I GLC A   ++   +  EM   G+ P VVTF  I+  LCK
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM--GCKHDD 347
             ++D+A ++   M++RG  P++ TY+ ++D      +++  +E+   M++M  GC  + 
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            ++N  I   C++ +   A ++   M+  G  P +++YN +  GL +   V+ A KL  +
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 408 MQRDGVAA-DTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKS 465
           M   G    D   + T I G CK G + +A +L   ++    C  D+  YN LIDG  K 
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G LK A  L   +      PNVVTY  +I G    G  ++A  LF +M      PD+IT+
Sbjct: 415 GSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITY 474

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKK--VMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           + ++  F +    SK   +  ++K K     PDA    I++D   + E + + L   L+Q
Sbjct: 475 NTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLT--LLQ 532

Query: 584 E 584
           E
Sbjct: 533 E 533



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 221/444 (49%), Gaps = 9/444 (2%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  P++ TYN  I+  CK G++  G      + R    P+  TF S+I GL   +RI +
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F  +   GC P+ +TY+ +++ L R       L+  +E+      +   C     T
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANR----LDTVDEVLEHMQAMKAGCVMEVYT 296

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++  I  LC+ G    AK + L M +    P++++YN +I GLC + + ++A +L  +M+
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356

Query: 270 DQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV-RPNACTYNTLMDGFCLMGK 327
           D G  +P V+ FN ++   CK  ++ +A +LL  M  + +  P+  TYNTL+DG    G 
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + +A+ L   M+++GCK + V+Y  LINGY K+   EEA SL+ EM +KG  P ++TYNT
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           +     +   +  A  ++ +++      + D  TY   IDG C+     + + L + +  
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTA 536

Query: 446 LKCELDIQAYNCLIDGLCKSGRL-KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                D   YN LI  L ++  +   A  ++  +     VP+   +N +++     G ++
Sbjct: 537 RGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVN 596

Query: 505 KARDLFLDMEENAAAPDVITFDML 528
            AR +  +M E     D    + L
Sbjct: 597 SARSMVQEMNEKGHLVDASNLEAL 620


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 276/539 (51%), Gaps = 19/539 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNIL 102
           EA  + D+M       P V S+  ++  + K+    + L         GL P++  YNI+
Sbjct: 167 EAKGLLDWMWS-KDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIM 225

Query: 103 INCFCKIGRVSLGFIAFGRILR-SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           I+ F K G    G   + R+++ SC  PN  T+N +I GL    R  E+  ++ ++K   
Sbjct: 226 IDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNE 285

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           CE ++ TY++LI GLC  G+   A+ +++EM   +  +      + VTY+ +++G C+ G
Sbjct: 286 CEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV------DVVTYNALLNGFCRAG 339

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + ++  L++ M  EN + +VV+YN  I GL       EA  ++  +  +G      T+ 
Sbjct: 340 KIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYG 398

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           V++  LCKN  +++A ++L      G + +A  Y++++DG    G+++ A  +   M+  
Sbjct: 399 VLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY 458

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC+      N LING+ +  ++EEA+  +REM +KG  PTVV+YNTL  GL +  +   A
Sbjct: 459 GCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDA 518

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
                EM       D  TY+  +DGLC+   I  A+ L+R + +   E D+  +N L+ G
Sbjct: 519 YSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHG 578

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC +G+++ A  L+ ++     +PN+VT+N ++ GL    + + A  ++  M +N   PD
Sbjct: 579 LCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPD 638

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +I++++ + G       S    L     +  ++P     SI   +LV+  + L  L S 
Sbjct: 639 IISYNITLKGLCSCGRISDGIALFDDALKNGILP----TSITWYILVRAVLKLGPLDSL 693



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 248/477 (51%), Gaps = 12/477 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           G  P + +YN L+N F +   +  +  F+A+   +     PN  T+N LIK    + + +
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVG--ILPNLQTYNILIKISVKKRQFV 166

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  L   + +   +P+V +Y T+ING+ ++G  + AL +F+EM     E G+V  P+ +
Sbjct: 167 EAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMF----ERGLV--PDVM 220

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            Y+ +IDG  K G   + K ++ ++ K   + P+VVTYN +I+GLC    ++E+  ++  
Sbjct: 221 CYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWER 280

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M     +  + T++ ++  LC    +D A  +   MV+R V  +  TYN L++GFC  GK
Sbjct: 281 MKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGK 340

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I  + EL+  M    C H+ VSYNI I G  +N++VEEA+S++  +  +G      TY  
Sbjct: 341 IKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGV 399

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL +   +  ALK+  E +  G   D   Y++ +DGL K G + EA+ +   +    
Sbjct: 400 LIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYG 459

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           CEL     N LI+G  ++ +L+ A   F  +      P VV+YN +I GLC   +   A 
Sbjct: 460 CELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAY 519

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
               +M E    PD+IT+ +L+ G  +  +      L  ++  K + PD ++ +I++
Sbjct: 520 SFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILM 576



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 251/473 (53%), Gaps = 17/473 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   ++N+L+      + + +A +     +  G  PN+ TYN LI    +    + A  L
Sbjct: 112 PGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGL 171

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            + M + +       KP+  +Y T+I+G+ K G +  A  +F +M +  + PDV+ YN +
Sbjct: 172 LDWMWSKD------LKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIM 225

Query: 249 IHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           I G     D+ + K ++ E + +G  V P+VVT+NV+++ LCK  + DE+  + + M + 
Sbjct: 226 IDGFFKRGDYVQGKEIW-ERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKN 284

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
               +  TY++L+ G C +G ++ A E++  M       D V+YN L+NG+C+  +++E+
Sbjct: 285 ECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKES 344

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L+  M+ K     VV+YN    GLFE  +VE A+ +++ ++R G  AD+ TY   I G
Sbjct: 345 FELWV-MMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHG 403

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGV-LV 484
           LCKNG++ +A+++ +  +    +LD  AY+ ++DGL K GR+  A  +   +  +G  L 
Sbjct: 404 LCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELS 463

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V   N +I G     ++++A   F +ME    +P V++++ LI+G  +    S     
Sbjct: 464 PHVC--NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSF 521

Query: 545 LHKMKEKKVMPDASIVSIVVDLLV---KNEISLKSLPSFLVQERQGEVGESNV 594
           + +M EK   PD    S+++D L    K +++L      LV+  + +V   N+
Sbjct: 522 VKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNI 574



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 195/370 (52%), Gaps = 3/370 (0%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLIHGLCHANDWNEA 261
           CK       T++    K    ++A   F +M++     P + +YN+L++    AN   +A
Sbjct: 74  CKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKA 133

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           +         G+ P++ T+N+++    K R+  EA  LLD M  + ++P+  +Y T+++G
Sbjct: 134 ESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVING 193

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKP 380
               G +  A E+F  M   G   D + YNI+I+G+ K  +  +   ++  +V    + P
Sbjct: 194 MVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYP 253

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VVTYN +  GL ++ + + +L++++ M+++    D  TY++ I GLC  G +  AVE++
Sbjct: 254 NVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVY 313

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
           + +      +D+  YN L++G C++G++K ++EL+  +       NVV+YNI I+GL  +
Sbjct: 314 KEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHNVVSYNIFIRGLFEN 372

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            ++++A  ++  +    +  D  T+ +LIHG  +    +K  ++L + K+     DA   
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432

Query: 561 SIVVDLLVKN 570
           S +VD L K 
Sbjct: 433 SSIVDGLSKQ 442



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 7/240 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           L  H   P ++ F +  + L +   +   +   G  P + +YN LIN  CK  R S  + 
Sbjct: 462 LSPHVCNPLINGF-VRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYS 520

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +L   + P+  T++ L+ GL    +I  A  L+ ++   G EP+V  +N L++GLC
Sbjct: 521 FVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLC 580

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
             G    AL L+  M   N      C PN VT++T++DGL K    + A  ++  M    
Sbjct: 581 SAGKIEDALLLYSNMKQSN------CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNG 634

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+++YN  + GLC     ++   LF + +  G+ P+ +T+ +++  + K   +D  S
Sbjct: 635 FQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 113/252 (44%), Gaps = 39/252 (15%)

Query: 338 MESMGCK-HDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTL------- 388
           +++  CK  +DV   +L   Y K+K   EAL  +++M    G KP + +YN L       
Sbjct: 69  IKTQKCKCTEDVVLTVL-KAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEA 127

Query: 389 --------FLGLFEI--------------------HQVEHALKLFDEMQRDGVAADTRTY 420
                   FL  FE                      Q   A  L D M    +  D  +Y
Sbjct: 128 NLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSY 187

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I+G+ K+G ++ A+E+F  +       D+  YN +IDG  K G      E++  L  
Sbjct: 188 GTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVK 247

Query: 481 GVLV-PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           G  V PNVVTYN+MI GLC  G+ D++ +++  M++N    D+ T+  LI G   +    
Sbjct: 248 GSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVD 307

Query: 540 KVNELLHKMKEK 551
              E+  +M ++
Sbjct: 308 GAVEVYKEMVKR 319


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 225/416 (54%), Gaps = 6/416 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++Y+YN +I+ F K  ++      F R+    F+P+  T+N +I  L +  ++  A  +
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             +L   GC+P+VITY  LI      G    AL LF+E+ +         +P+  TY+ I
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG------LRPDLYTYNAI 242

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G+CKEG  D+A      +     NPDVV+YN L+    + + W + +RL  +M+  G 
Sbjct: 243 IRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGC 302

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P+VVT ++++   C+  ++ EA  +L++M ++G+ P++ +Y+ L+  FC  G+++ A E
Sbjct: 303 EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIE 362

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
               M S GC  D V+YN ++   CK    + AL ++ ++   G  PTV  YNT+F  L+
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALW 422

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                  AL++  EM R G+  D  TY + I  LC++G + EA+ L   +   + +  + 
Sbjct: 423 SCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVI 482

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           ++N ++ G+CK+ R+    EL  ++     +PN  +Y ++I+G+   G   +A +L
Sbjct: 483 SFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 212/427 (49%), Gaps = 6/427 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL +   P+  ++N++I G    ++I  A  +F ++++ G  P+V+TYN +I  LC  G 
Sbjct: 122 ILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGK 181

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +A  + +E+          CKP+ +TY+ +I+    EG +++A  LF ++    + PD
Sbjct: 182 LELAFEVMDELLKDG------CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPD 235

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           + TYN++I G+C     + A      +  +G  P VV++N+++       + ++  RL+ 
Sbjct: 236 LYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMK 295

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            MV  G  PN  T++ L+  FC  G++  A  +   M+  G   D  SY+ LI+ +CK  
Sbjct: 296 DMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A+    +MVS G  P +V YNT+   L +    + AL +F+++   G     R Y 
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYN 415

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T    L   G  I+A+E+   +     + D   YN LI  LC+ G +  A  L   +   
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT 475

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P V+++NI++ G+C   ++ +  +L + M E    P+  ++ +LI G       ++ 
Sbjct: 476 RFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535

Query: 542 NELLHKM 548
            EL + +
Sbjct: 536 MELANSL 542



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 232/477 (48%), Gaps = 11/477 (2%)

Query: 93  FPNLYTYNI----LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           FPNL   +     L+N  C+ G+ +        ++   F P+      LIKG      + 
Sbjct: 55  FPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLK 114

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  +   L+ +G +P+V +YN +I+G  +      A  +F+ M +          P+ V
Sbjct: 115 KAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRG------FSPDVV 167

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+ +I  LC  G ++ A  +  ++  +   P V+TY  LI         NEA  LF E+
Sbjct: 168 TYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDEL 227

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + +G++P + T+N I+  +CK    D A   +  +  RG  P+  +YN L+  F    + 
Sbjct: 228 VSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRW 287

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
              E L   M   GC+ + V+++ILI+ +C+   V EA+++   M  KG+ P   +Y+ L
Sbjct: 288 EDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPL 347

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                +  +++ A++  ++M  DG   D   Y T +  LCK G    A+++F  L  + C
Sbjct: 348 ISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGC 407

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
              ++AYN +   L   G    A E+   +    + P+ +TYN +I  LC DG +D+A  
Sbjct: 408 PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIG 467

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           L +DME     P VI+F++++ G  + +   +  ELL  M EK  +P+ +   ++++
Sbjct: 468 LLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIE 524



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 196/414 (47%), Gaps = 35/414 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+N +++  +K    D+      R+ + G  P++ TYNI+I   C  G++ L F  
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +L+    P+  T+  LI+    E RI EA  LF +L + G  P++ TYN +I G+C+
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
            G    AL+    ++       VV                             C+PN VT
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +S +I   C+EG V +A  +   MK++ + PD  +Y+ LI   C     + A     +M+
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P +V +N I+  LCK    D A  + + + + G  P    YNT+       G   
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A E+   M   G   D+++YN LI+  C++  V+EA+ L  +M +   +PTV+++N + 
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           LG+ + H+V   ++L   M   G   +  +Y   I+G+   G+  EA+EL  +L
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 192/399 (48%), Gaps = 7/399 (1%)

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+N  CR G    +L   E + +         KP+ V  + +I G      + KA  + +
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKG------FKPDVVLCTKLIKGFFNSRNLKKAMRV-M 120

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           ++ +   +PDV +YN++I G   AN  + A ++F  M  +G  P VVT+N+++  LC   
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K++ A  ++D +++ G +P+  TY  L++   L G+IN A ELF  + S G + D  +YN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYN 240

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I G CK    + AL   R + ++G  P VV+YN L        + E   +L  +M   
Sbjct: 241 AIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLS 300

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  T++  I   C+ G + EAV +   ++      D  +Y+ LI   CK GRL  A
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            E    +     +P++V YN ++  LC  G  D A D+F  ++E    P V  ++ +   
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSA 420

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                   K  E++ +M  K + PD    + ++  L ++
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRD 459



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 181/372 (48%), Gaps = 17/372 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILI 103
           AF + D +L+     P V ++ IL+ +       +  L       + GL P+LYTYN +I
Sbjct: 185 AFEVMDELLK-DGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243

Query: 104 NCFCKIGRVSLGFIAFGRIL--RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
              CK G      + F R L  R C  P+  ++N L++    +SR  +   L   +   G
Sbjct: 244 RGICKEGMEDRA-LDFVRHLSARGC-NPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           CEPNV+T++ LI+  CR G    A+N+ E M     E G+   P++ +Y  +I   CKEG
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVMK----EKGLT--PDSYSYDPLISAFCKEG 355

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A     +M  +   PD+V YN+++  LC     + A  +F ++ + G  P+V  +N
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYN 415

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            +   L       +A  ++  M+++G+ P+  TYN+L+   C  G ++ A  L   ME+ 
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT 475

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
             +   +S+NI++ G CK   V E + L   MV KG  P   +Y  L  G+        A
Sbjct: 476 RFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535

Query: 402 LKLFDEMQRDGV 413
           ++L + + R GV
Sbjct: 536 MELANSLYRLGV 547



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 158/331 (47%), Gaps = 1/331 (0%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           + A F Q    N++        L++  C A   NE+      ++ +G +P VV    ++ 
Sbjct: 46  SSAEFRQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIK 105

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
               +R + +A R+++++   G  P+  +YN ++ GF    +I+ A ++F  M S G   
Sbjct: 106 GFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSP 164

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D V+YNI+I   C   ++E A  +  E++  G KP+V+TY  L        ++  AL+LF
Sbjct: 165 DVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELF 224

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           DE+   G+  D  TY   I G+CK G    A++  R L    C  D+ +YN L+      
Sbjct: 225 DELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNK 284

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            R +    L   +      PNVVT++I+I   C +G++ +A ++   M+E    PD  ++
Sbjct: 285 SRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSY 344

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           D LI  F +        E L KM     +PD
Sbjct: 345 DPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 12/291 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD--TRLNA----TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+NILL S      ++   RL      +G  PN+ T++ILI+ FC+ GRV      
Sbjct: 269 PDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNV 328

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +     TP++ +++ LI     E R+  A     K+ + GC P+++ YNT++  LC+
Sbjct: 329 LEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +AL++FE++     E+G  C P    Y+T+   L   G   KA  +  +M  + I
Sbjct: 389 FGCADLALDVFEKL----DEVG--CPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGI 442

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD +TYNSLI  LC     +EA  L ++M     QP+V++FN+++  +CK  ++ E   
Sbjct: 443 DPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIE 502

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           LL  MV++G  PN  +Y  L++G    G    A EL  S+  +G    D S
Sbjct: 503 LLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSS 553


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 236/472 (50%), Gaps = 19/472 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++NILL +L KN   D        +++ G  P+  +Y  LI+  CK+G+V      
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE---- 234

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R L   FTP+   +N+LI G+  E    EA  L  ++   G +PNVI+Y T+IN L  
Sbjct: 235 -ARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            G+  ++L +  +M A G       C PN  T++++I G   +G   +A   + +M  E 
Sbjct: 294 AGNVELSLAVLAKMFARG-------CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P+VV YN+L+HGLC      +A  +F +M   G  P+V T++ ++D   K   +D AS
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            + + M+  G  PN   Y  ++D  C     N+A  L  +M+   C  + V++N  I G 
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C +  V+ A+ ++ +M + G  P   TYN L   L +  +   A  L  +M+  G+  + 
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T I G C  G + EA+EL   + +   + D    N +ID  CK G++  A +L   
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
           L  G   P+++ Y  +I G+C    +++A      M     +P+V T+++L+
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 236/469 (50%), Gaps = 11/469 (2%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I  + + G        F R+      P    +N ++  L  E+R      +++ +K  G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EPNV TYN L+  LC+      A  L  EM++        C P+ V+Y+T+I  LCK G
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG------CDPDEVSYTTLISSLCKLG 230

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A+ L +     +  P V  YN+LI+G+C    + EA +L  EMM++G+ P+V+++ 
Sbjct: 231 KVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I++ L     ++ +  +L  M  RG  PN  T+ +L+ GF L G  + A + +  M   
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   + V+YN L++G C  + + +A+S++ +M   G  P V TY+ L  G  +   ++ A
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++++ M   G   +   YT  +D LC+N    +A  L   +++  C  +   +N  I G
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC SGR+ +A ++F  + +    PN  TYN ++  L  D +  +A  L  DME      +
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           ++T++ +I+G+       +  ELL KM  +   PDA  V+IV+D   K 
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 243/512 (47%), Gaps = 17/512 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N +L +L     +       + +   G+ PN++TYNIL+   CK  RV      
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  ++ +LI  L    ++ EA  L     A    P+V  YN LING+C+
Sbjct: 204 LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCK 258

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  L +EM N   +      PN ++Y+TII+ L   G V+ + A+  +M     
Sbjct: 259 EYTFEEAFQLLDEMMNKGID------PNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P++ T+ SLI G       +EA   +  M+ +GV P+VV +N +M  LC  R + +A  
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M   G  PN  TY+ L+DG+   G ++ A E++  M + GC  + V+Y  +++  C
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +N    +A  L   M  +   P  VT+NT   GL    +V+ A+K+FD+M   G   +T 
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +D L K+    EA  L + +     EL++  YN +I G C +G L  A EL   +
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+ +T NI+I   C  G+++ A  L   +      PD+I +  LI G       
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +    L +M  + + P+ +  +++V  L  N
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 10/389 (2%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +AL  F+ +AN         K   +TY  +I+ L  E  +D  + L  QMK E I+    
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            + S+I     A    +A + F  M D  V+P+V  +N I+D L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            + G+ PN  TYN L+   C   +++ A +L   M S GC  D+VSY  LI+  CK  +V
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA    RE+ +    P+V  YN L  G+ + +  E A +L DEM   G+  +  +YTT 
Sbjct: 233 KEA----REL-AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+ L   G +  ++ +   +    C  ++  +  LI G    G    A + +  +    +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VPNVV YN ++ GLC+   +  A  +F  ME N   P+V T+  LI G+ +  +    +E
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           + + M      P+    + +VD+L +N +
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSM 436



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 13/255 (5%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
           ++++M+  H   P V ++  ++  L +N  ++        +      PN  T+N  I   
Sbjct: 408 VWNWMI-THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C  GRV      F ++  S   PN  T+N L+  L  + R  EA  L   ++  G E N+
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TYNT+I G C  G    AL L  +M           KP+ +T + +ID  CK+G V+ A
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRG------TKPDAITVNIVIDAYCKQGKVNIA 580

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             L  ++     +PD++ Y SLI G+C      EA      M+ +G+ P+V T+NV++  
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640

Query: 287 LCKNRKMDEASRLLD 301
           L  N     A + LD
Sbjct: 641 LFSNMGHSGAVQFLD 655


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/583 (27%), Positives = 260/583 (44%), Gaps = 109/583 (18%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVS-------------------------LGFIAF 119
           ++L   GL P+  TYN +I  +CK G ++                         LG+   
Sbjct: 172 SQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRT 231

Query: 120 GRILRSCF----------TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           G + ++C+            N  ++  LI+GL     + EA  L   +   GC PN+ TY
Sbjct: 232 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTY 291

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
             LI GLC+ G    A  L +EM       GVV  P+  TY+ +IDG CK G +  A  +
Sbjct: 292 TLLIRGLCKEGRIHDARVLLDEMPRR----GVV--PSVWTYNAMIDGYCKSGRLKDALGI 345

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
              M+    NPD  TYNSLIHGLC     +EA+ L    + +G  P+V+TF  I++  CK
Sbjct: 346 KTLMEGNGCNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFSPTVITFTNIINGYCK 404

Query: 290 NRKMDEASRLLDLMVQR-----------------------------------GVRPNACT 314
             K+D+A R+  +M+                                     G+ PN   
Sbjct: 405 AEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVI 464

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y +++D +C +GK+  A E+F   E  GC+ +  +Y+ LI G  +++++ +A++L  +M 
Sbjct: 465 YTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
             GI P V+TY TL  G  + H+ ++A +LF+ M+++G+  D + Y    D LCK+G   
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 584

Query: 435 EAVEL---------------------------FRTLRILK-----CELDIQAYNCLIDGL 462
           EA                              F    I K     C+ D   Y+ L+  L
Sbjct: 585 EAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQAL 644

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK  +L  A  +   +    +  N+V Y I+I  +  +G+ D A+ +F +M  +   P  
Sbjct: 645 CKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 704

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           IT+ + I  + +I    +   L+ +M+   V PD    ++ ++
Sbjct: 705 ITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFIN 747



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 155/547 (28%), Positives = 252/547 (46%), Gaps = 48/547 (8%)

Query: 67  VSSFNILLASLAKN---KHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + ++ +L++ L K    K     LN   A GL PN+  Y  +I+ +CK+G+V      F 
Sbjct: 427 LQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK 486

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
                   PNA T++SLI GL  + ++ +A AL TK++  G  P VITY TLI G C+  
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 546

Query: 181 HTMIALNLFEEM-ANG--------NGEIGVVCKP-----------------NTVTYSTII 214
               A  LFE M  NG        N     +CK                    VTY++++
Sbjct: 547 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLV 606

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           DG  K G  + A AL  +M +E    D  TY+ L+  LC     NEA  +  +M  +GV+
Sbjct: 607 DGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVK 666

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            ++V + +I+ E+ K  K D A  + + M+  G +P+A TY   +  +C +G+I  A  L
Sbjct: 667 GNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHL 726

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL---FL- 390
            G ME  G   D V+YN+ ING      ++ A S  + M+    +P   TY  L   FL 
Sbjct: 727 IGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLK 786

Query: 391 ------------GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
                       G++   +++   +L + M + G+     TY++ I G CK   + EA  
Sbjct: 787 MSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACV 846

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   +       + + Y  LI   C     + A     ++      P++ +Y+ +I GLC
Sbjct: 847 LLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLC 906

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           ++G  DKA+ LF D+ E     + + + +L  G ++       ++LL  M+ +    D+ 
Sbjct: 907 DEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSE 966

Query: 559 IVSIVVD 565
             S+V +
Sbjct: 967 TYSMVTN 973



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 214/432 (49%), Gaps = 8/432 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L+++L   G  P+ +TYNT+I   C+ G   IA   F  +     E+      +T T + 
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEM------DTYTCNA 223

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ G C+ G + KA  L + M       +  +Y  LI GLC      EA  L + M+  G
Sbjct: 224 LLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDG 283

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P++ T+ +++  LCK  ++ +A  LLD M +RGV P+  TYN ++DG+C  G++  A 
Sbjct: 284 CSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDAL 343

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   ME  GC  DD +YN LI+G C  K  +EA  L    +++G  PTV+T+  +  G 
Sbjct: 344 GIKTLMEGNGCNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFSPTVITFTNIINGY 402

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +++ AL++   M       D + Y   I  L K   + EA +    +       ++
Sbjct: 403 CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNV 462

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +ID  CK G++  A E+F    H    PN  TY+ +I GL  D ++ KA  L   
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 522

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M+E+   P VIT+  LI G  + +E      L   M++  + PD    +++ D L K+  
Sbjct: 523 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 582

Query: 573 SLKSLPSFLVQE 584
           + ++  SFLV++
Sbjct: 583 AEEAY-SFLVKK 593



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 162/343 (47%), Gaps = 1/343 (0%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN  +  L   +      +L+ +++ +G+ P  VT+N ++   CK   +  A R   L+ 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G+  +  T N L+ G+C  G + +A  L   M  MGC+ ++ SY ILI G C+ + V 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EAL L   M+  G  P + TY  L  GL +  ++  A  L DEM R GV     TY   I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           DG CK+G + +A+ +   +    C  D   YN LI GLC  G+   A EL          
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFS 389

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P V+T+  +I G C   ++D A  +   M  +    D+  + +LI   I+ +   +  + 
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           L+++    + P+  I + ++D   K      +L  F + E +G
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG 492



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 194/428 (45%), Gaps = 26/428 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD---TRLNATGLFPNLYTYNILIN 104
           + AF +F+ M+  +   P   ++N+L  +L K+   +   + L   G+     TY  L++
Sbjct: 549 DNAFRLFE-MMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVD 607

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
            F K G          +++      ++ T++ L++ L  + ++ EA ++  ++   G + 
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKG 667

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           N++ Y  +I+ + + G    A ++F EM +         KP+ +TY+  I   CK G ++
Sbjct: 668 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH------KPSAITYTVFISSYCKIGRIE 721

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  L  +M+   + PDVVTYN  I+G  H    + A      M+D   +P+  T+ +++
Sbjct: 722 EAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLL 781

Query: 285 DELCKNR----------------KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
               K                  K+D   +LL+ MV+ G+ P A TY++++ GFC   ++
Sbjct: 782 KHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRL 841

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L   M       ++  Y +LI   C  K  E+A S    M+  G +P + +Y+ L
Sbjct: 842 EEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYL 901

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +    + A  LF ++       +   +    DGL K G++    +L   +    C
Sbjct: 902 ITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHC 961

Query: 449 ELDIQAYN 456
            +D + Y+
Sbjct: 962 RIDSETYS 969



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 98/210 (46%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +E  +A+   R    K +  +   YN     L      EH  KL+ ++ ++G+  DT TY
Sbjct: 127 REAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTY 186

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I   CK G +  A   FR LR    E+D    N L+ G C++G L+ A  L   +P 
Sbjct: 187 NTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPL 246

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
                N  +Y I+IQGLC    + +A  L L M ++  +P++ T+ +LI G  +      
Sbjct: 247 MGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHD 306

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              LL +M  + V+P     + ++D   K+
Sbjct: 307 ARVLLDEMPRRGVVPSVWTYNAMIDGYCKS 336



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 30/255 (11%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI- 117
           P V ++N+ +       + D       R+      PN +TY +L+  F K+   +  ++ 
Sbjct: 737 PDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVD 796

Query: 118 ---------------AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
                             R+++    P A T++S+I G    +R+ EA  L   +     
Sbjct: 797 TSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDI 856

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            PN   Y  LI   C        + LFE+ A+     I    +P+  +Y  +I GLC EG
Sbjct: 857 SPNEEIYTMLIKCCCD-------IKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEG 909

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             DKAKALF  + + + N + V +  L  GL  A   +   +L   M ++  +    T++
Sbjct: 910 DYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYS 969

Query: 282 VIMDELCKNRKMDEA 296
           ++ + + +   M E+
Sbjct: 970 MVTNNIHEASGMYES 984


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 238/443 (53%), Gaps = 16/443 (3%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           ++L+  +    R  LGF AF R     +  +A +   L+  L  ++R  +   L+ ++  
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIR 216

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
              +PNV T+N +IN LC+TG    A ++ E+M            PN V+Y+T+IDG CK
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG------YSPNVVSYNTLIDGYCK 270

Query: 220 ---EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
               G + KA A+  +M +  ++P++ T+N LI G    ++   + ++F EM+DQ V P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPN 330

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           V+T+N +++ LC   K++EA  + D MV  GV+PN  TY++L++GFC  G +  A ++F 
Sbjct: 331 VITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
           S++  G +     YN+LI+ YCK  ++++  +L  EM  +GI P V TYN L  GL    
Sbjct: 391 SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +E A KLFD++   G+  D  T+   ++G C  G   +A  L + +  +  +     YN
Sbjct: 451 NIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 457 CLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
            ++ G CK G LK A  +   +     L  NV +YN+++QG    G+++ A  L  +M E
Sbjct: 510 IMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569

Query: 516 NAAAPDVITF-----DMLIHGFI 533
               P+ IT+     +M+  GF+
Sbjct: 570 KGLVPNRITYEIVKEEMVDKGFV 592



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 224/438 (51%), Gaps = 18/438 (4%)

Query: 68  SSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
           S F +   +  ++ +Y  +L+A    P       L+    K  R +     +  ++R   
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSAMSCKP-------LMVALLKQNRSADVEYLYKEMIRRKI 219

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR---TGHTMI 184
            PN  TFN +I  L    ++ +A  +   +K +G  PNV++YNTLI+G C+    G    
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYK 279

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A  + +EM            PN  T++ +IDG  K+  +  +  +F +M D+++ P+V+T
Sbjct: 280 ADAVLKEMVENE------VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YNSLI+GLC+    NEA  +  +M+  GVQP+++T++ +++  CKN  M EA  + D + 
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
            +G RP    YN L+D +C +GKI+    L   ME  G   D  +YN LI G C+N  +E
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A  L+ ++ +KG+ P +VT++ L  G     +   A  L  EM + G+     TY   +
Sbjct: 454 AAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512

Query: 425 DGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
            G CK G +  A  +   + +  +  +++ +YN L+ G  + G+L+ A  L   +    L
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572

Query: 484 VPNVVTYNIMIQGLCNDG 501
           VPN +TY I+ + + + G
Sbjct: 573 VPNRITYEIVKEEMVDKG 590



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 195/376 (51%), Gaps = 29/376 (7%)

Query: 32  FRDLTTREGDINVITPN---EAFCIFDYM---------LRMHPSPPPVSSFNILLASLAK 79
           ++++  R+   NV T N    A C    M         ++++   P V S+N L+    K
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCK 270

Query: 80  ----NKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
                K Y        +    + PNL T+NILI+ F K   +      F  +L     PN
Sbjct: 271 LGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPN 330

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
             T+NSLI GL    +I EA  +  K+ + G +PN+ITY++LING C+ G    AL++F+
Sbjct: 331 VITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
            +       G   +P T  Y+ +ID  CK G +D   AL  +M+ E I PDV TYN LI 
Sbjct: 391 SVK------GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           GLC   +   AK+LF ++ ++G+ P +VTF+++M+  C   +  +A+ LL  M + G++P
Sbjct: 445 GLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKP 503

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSL 369
              TYN +M G+C  G +  A  +   ME     + +  SYN+L+ GY +  ++E+A  L
Sbjct: 504 RHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563

Query: 370 YREMVSKGIKPTVVTY 385
             EM+ KG+ P  +TY
Sbjct: 564 LNEMLEKGLVPNRITY 579



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 179/311 (57%), Gaps = 4/311 (1%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+  L   N   + + L+ EM+ + +QP+V TFNV+++ LCK  KM++A  +++ M   G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 308 VRPNACTYNTLMDGFCLMG---KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             PN  +YNTL+DG+C +G   K+ +A+ +   M       +  ++NILI+G+ K+  + 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            +L +++EM+ + + P V+TYN+L  GL    ++  A+ + D+M   GV  +  TY + I
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +G CKNG + EA+++F +++        + YN LID  CK G++   + L   +    +V
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V TYN +I GLC +G ++ A+ LF D   N   PD++TF +L+ G+    E  K   L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTNKGLPDLVTFHILMEGYCSRGESRKAAML 492

Query: 545 LHKMKEKKVMP 555
           L +M +  + P
Sbjct: 493 LKEMSKMGLKP 503



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 198/379 (52%), Gaps = 17/379 (4%)

Query: 65  PPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN+++ +L K    NK  D    +   G  PN+ +YN LI+ +CK+G     + A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKA 280

Query: 119 ---FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                 ++ +  +PN  TFN LI G   +  +  +  +F ++      PNVITYN+LING
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING 340

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC  G    A+ + ++M +     GV  +PN +TY ++I+G CK G + +A  +F  +K 
Sbjct: 341 LCNGGKINEAIGMRDKMVSA----GV--QPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           +   P    YN LI   C     ++   L  EM  +G+ P V T+N ++  LC+N  ++ 
Sbjct: 395 QGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A +L D +  +G+ P+  T++ LM+G+C  G+  +A  L   M  MG K   ++YNI++ 
Sbjct: 455 AKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMK 513

Query: 356 GYCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           GYCK   ++ A ++  +M   + ++  V +YN L  G  +  ++E A  L +EM   G+ 
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573

Query: 415 ADTRTYTTFIDGLCKNGYI 433
            +  TY    + +   G++
Sbjct: 574 PNRITYEIVKEEMVDKGFV 592



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 182/335 (54%), Gaps = 11/335 (3%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           CKP       ++  L K+      + L+ +M    I P+V T+N +I+ LC     N+A+
Sbjct: 191 CKP-------LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCK---NRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            +  +M   G  P+VV++N ++D  CK   N KM +A  +L  MV+  V PN  T+N L+
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DGF     +  + ++F  M       + ++YN LING C   ++ EA+ +  +MVS G++
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P ++TY++L  G  +   ++ AL +FD ++  G    TR Y   ID  CK G I +   L
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              +       D+  YNCLI GLC++G ++ A +LF  L +  L P++VT++I+++G C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCS 482

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
            G+  KA  L  +M +    P  +T+++++ G+ +
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCK 517



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 15/247 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           NEA  + D M+     P  ++ ++ L+    KN      L+        G  P    YN+
Sbjct: 348 NEAIGMRDKMVSAGVQPNLIT-YHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNM 406

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ +CK+G++  GF     + R    P+  T+N LI GL     I  A  LF +L   G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+++T++ L+ G C  G +  A  L +EM+    ++G+  KP  +TY+ ++ G CKEG
Sbjct: 467 L-PDLVTFHILMEGYCSRGESRKAAMLLKEMS----KMGL--KPRHLTYNIMMKGYCKEG 519

Query: 222 FVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
            +  A  +  QM K+  +  +V +YN L+ G        +A  L  EM+++G+ P+ +T+
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579

Query: 281 NVIMDEL 287
            ++ +E+
Sbjct: 580 EIVKEEM 586



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 130/267 (48%), Gaps = 3/267 (1%)

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G + +A +   LM       +    E L+  M     + +  ++N++IN  CK  ++ +A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIH---QVEHALKLFDEMQRDGVAADTRTYTTF 423
             +  +M   G  P VV+YNTL  G  ++    ++  A  +  EM  + V+ +  T+   
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDG  K+  +  ++++F+ +       ++  YN LI+GLC  G++  A  +   +    +
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN++TY+ +I G C +G M +A D+F  ++     P    ++MLI  + ++ +      
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFA 422

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           L  +M+ + ++PD    + ++  L +N
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRN 449



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 3/240 (1%)

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E F      G K   +S   L+    K     +   LY+EM+ + I+P V T+N +   L
Sbjct: 174 EAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINAL 233

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK---NGYIIEAVELFRTLRILKCE 449
            +  ++  A  + ++M+  G + +  +Y T IDG CK   NG + +A  + + +   +  
Sbjct: 234 CKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVS 293

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  +N LIDG  K   L  + ++F  +    ++PNV+TYN +I GLCN G++++A  +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGM 353

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M      P++IT+  LI+GF +     +  ++   +K +   P   + ++++D   K
Sbjct: 354 RDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCK 413



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 131/277 (47%), Gaps = 8/277 (2%)

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKH---DDVSYNILINGYCKNKEVEEALSLYREM 373
           + +DGF   G  ++   +F ++ SM C +   + +  ++L+  Y  N   E     ++  
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAI-SM-CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRS 179

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
              G K + ++   L + L + ++      L+ EM R  +  +  T+   I+ LCK G +
Sbjct: 180 GYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKM 239

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCK---SGRLKFAWELFCSLPHGVLVPNVVTY 490
            +A ++   +++     ++ +YN LIDG CK   +G++  A  +   +    + PN+ T+
Sbjct: 240 NKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTF 299

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           NI+I G   D  +  +  +F +M +    P+VIT++ LI+G     + ++   +  KM  
Sbjct: 300 NILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVS 359

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             V P+      +++   KN +  ++L  F   + QG
Sbjct: 360 AGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/504 (32%), Positives = 245/504 (48%), Gaps = 23/504 (4%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P   S N  L  LAK       NK +   + A G+  +++TYNI+I   CK G +     
Sbjct: 215 PKARSCNAFLYRLAKTGKGDLSNKFFRDMVGA-GIAQSVFTYNIMIGYMCKEGDMVTAKS 273

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F ++ +   TP+  T+NSLI G      + E+  LF ++K  GCEP+VITYN LIN  C
Sbjct: 274 LFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC 333

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +      A +   EM N         KPN VTYST+ID LCKE  + +A    L M+   
Sbjct: 334 KYEQMPKAFHFLHEMKNSG------LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVG 387

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P+  TY SLI   C A   ++A +L  EM+   V  +VVT+  ++D LCK  +M EA 
Sbjct: 388 LSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAE 447

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M++ GV PN  TY  L+ G     ++  A EL   ++    K D + Y  +I G 
Sbjct: 448 DLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGL 507

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   ++EE   +  EM + GI+   V Y       F+  +   AL L  EM   GV    
Sbjct: 508 CSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTI 567

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN-----CLIDGLCKSGRLKFAW 472
            T+   IDGLCK G + EA++ F  +     + ++Q  N      LIDGLCK+  ++ A 
Sbjct: 568 VTFCVLIDGLCKKGLVEEAIDYFARM----ADFNLQPNNVAVCTALIDGLCKNNYIEAAK 623

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF  +    +VP+ + Y  +I G        +A ++   M E     D+  +  L+ G 
Sbjct: 624 KLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGL 683

Query: 533 IRINEPSKVNELLHKMKEKKVMPD 556
            + N   +    L++M  K ++PD
Sbjct: 684 SQGNLVQQARMFLNEMIGKGIVPD 707



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 261/509 (51%), Gaps = 19/509 (3%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNIL 102
           NV  P   F +FD +           S  I L  L +     +R+    +FP   + N  
Sbjct: 176 NVCVP--GFGVFDALF----------SVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAF 223

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +    K G+  L    F  ++ +    +  T+N +I  +  E  ++ A +LF ++K  G 
Sbjct: 224 LYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGL 283

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+++TYN+LI+G  + G    +  LFEEM +      V C+P+ +TY+ +I+  CK   
Sbjct: 284 TPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD------VGCEPDVITYNALINCFCKYEQ 337

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           + KA     +MK+  + P+VVTY++LI  LC  +   +A +  ++M   G+ P+  T+  
Sbjct: 338 MPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTS 397

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK   + +A +L D M+Q  V  N  TY TL+DG C  G++  AE+LF +M   G
Sbjct: 398 LIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAG 457

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              +  +Y  L++G+ KNK VE AL L +E+  K IKP ++ Y T+  GL   +++E   
Sbjct: 458 VTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECE 517

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +  EM+  G+ A++  YT  +D   K G  +EA+ L + +  L  E+ I  +  LIDGL
Sbjct: 518 FVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGL 577

Query: 463 CKSGRLKFAWELFCSLPHGVLVP-NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           CK G ++ A + F  +    L P NV     +I GLC +  ++ A+ LF +M++    PD
Sbjct: 578 CKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPD 637

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKE 550
            I +  LI G ++  +  +   +  +M E
Sbjct: 638 KIAYTALIDGNLKHKDFQEALNIRSRMSE 666



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 211/383 (55%), Gaps = 2/383 (0%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           VC P    +  +     + G +++A   F +M    + P   + N+ ++ L      + +
Sbjct: 177 VCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLS 236

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            + F +M+  G+  SV T+N+++  +CK   M  A  L   M Q G+ P+  TYN+L+DG
Sbjct: 237 NKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDG 296

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +  +G ++ +  LF  M+ +GC+ D ++YN LIN +CK +++ +A     EM + G+KP 
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVTY+TL   L + H ++ A+K   +M+R G++ +  TYT+ ID  CK GY+ +A++L  
Sbjct: 357 VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +  ++   ++  Y  L+DGLCK GR+  A +LF ++    + PN+ TY  ++ G   + 
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           +++ A +L  +++E    PD++ +  +I G    N+  +   ++ +MK   +  ++ I +
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536

Query: 562 IVVDLLVKNEISLKSLPSFLVQE 584
           I +D   K   ++++L   L+QE
Sbjct: 537 IRMDAYFKTGKTVEALN--LLQE 557



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 224/524 (42%), Gaps = 99/524 (18%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
           +EGD+  +T    F    + ++     P + ++N L+    K    D        +   G
Sbjct: 264 KEGDM--VTAKSLF----HQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
             P++ TYN LINCFCK  ++   F     +  S   PN  T+++LI  L  E  + +A 
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                ++  G  PN  TY +LI+  C+ G+   AL L +EM      + V    N VTY+
Sbjct: 378 KFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM------LQVQVGFNVVTYT 431

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINP------------------------------- 240
           T++DGLCKEG + +A+ LF  M    + P                               
Sbjct: 432 TLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEK 491

Query: 241 ----DVVTYNSLIHGLCHANDWNE-----------------------------------A 261
               D++ Y ++I GLC  N   E                                   A
Sbjct: 492 KIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEA 551

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN---ACTYNTL 318
             L  EM D GV+ ++VTF V++D LCK   ++EA      M    ++PN    CT   L
Sbjct: 552 LNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCT--AL 609

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +DG C    I  A++LF  M+      D ++Y  LI+G  K+K+ +EAL++   M   G+
Sbjct: 610 IDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGM 669

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +  +  Y +L  GL + + V+ A    +EM   G+  D       +    + G I EA+E
Sbjct: 670 ELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIE 729

Query: 439 LFRTLRILKCELD--IQAYNCLIDGL--CKSGRLKFAWELFCSL 478
           L   L + K  LD  ++  N + + +  C+ G   + W+  C++
Sbjct: 730 LHDEL-LKKVPLDELLEEQNLMPEKILRCRDGD-GYDWKETCTM 771



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 98/208 (47%)

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P    ++ LF    E+  +E A + F  M R  V    R+   F+  L K G    + + 
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           FR +        +  YN +I  +CK G +  A  LF  +    L P++VTYN +I G   
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G +D++  LF +M++    PDVIT++ LI+ F +  +  K    LH+MK   + P+   
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQG 587
            S ++D L K  +  +++   L   R G
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVG 387


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/404 (34%), Positives = 218/404 (53%), Gaps = 11/404 (2%)

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
            Y+ ++  L + G    AL +FE M + +      C P+ VTY+ +I+  C  G   KA 
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSES------CVPSLVTYNVLINSRCNAGEFGKAL 65

Query: 228 ALFLQMKDEN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
            LF  MK E  + PD  TYN+LI GLC + +   A++L  EM D+ +  +V T++ I+  
Sbjct: 66  DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKS 125

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           L K  K +E+ ++L+ M+  G  P+   +N +M GF     + +A E++  M   G K D
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMV--SKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
           +VSY+ILI+G  K  +++E+L +  EM   + G  P V+T++TL  GL    ++E AL++
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F  M   G   +  TYTT I GLC+   +I+A ELF  +       D  AYN LI G CK
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 465 SGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            G +  A +L+  +  G  L P +VT+N +I G C  G++ +A +L  +M     A D  
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDL 566
           T+ +LI G  R  +  +  E+  +M+EKK + D  S VS V  L
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 227/433 (52%), Gaps = 14/433 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAA 152
           P+L TYN+LIN  C  G        F  + R     P+  T+N+LI GL +      A  
Sbjct: 43  PSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARK 102

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L ++++      NV TY+++I  L +      +  + EEM      +   C P+   ++ 
Sbjct: 103 LLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM------MAAGCNPDVFAFNG 156

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM--D 270
           ++ G  +   ++KA+ ++  M +    PD V+Y+ LIHGL      +E+ ++  EM    
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G  P+V+TF+ ++  LC+  ++++A  +   M++ G +PN  TY TL+ G C   K+ +
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYNTLF 389
           A ELF  M       D V+YN LI GYCK   ++EA  LYREM    G++PT+VT+NTL 
Sbjct: 277 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  ++ ++  A +L  EM   G+AADT TY   I GL +   + EA+E+++ +R  K  
Sbjct: 337 DGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           LD  +    + GLCK+G +  A+ +F +      VPN  T+ I+ + L   G+++ A+ L
Sbjct: 397 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 456

Query: 510 FLDMEENAAAPDV 522
                E A A D+
Sbjct: 457 M----EPAKARDI 465



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 225/440 (51%), Gaps = 8/440 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
            ++ +++ L     + +A  +F  +K+  C P+++TYN LIN  C  G    AL+LF+ M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                      +P+  TY+T+I GLC  G  + A+ L  +M+D+NI  +V TY+S+I  L
Sbjct: 72  KREK-----RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSL 126

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
                  E+ ++  EMM  G  P V  FN +M    ++  M++A  +   MV+ G +P+ 
Sbjct: 127 VKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186

Query: 313 CTYNTLMDGFCLMGKINRAEELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
            +Y+ L+ G   +GK++ + ++    +M + G   + ++++ LI+G C+  E+E+AL ++
Sbjct: 187 VSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 246

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             M+  G KP   TY TL  GL    +V  A +LF++M +  +  D   Y + I G CK 
Sbjct: 247 GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306

Query: 431 GYIIEAVELFRTLRI-LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           G + EA +L+R +      +  I  +N LIDG CK G+L  A EL   +    L  +  T
Sbjct: 307 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCT 366

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y I+I GL    ++D+A +++  M E     D ++    + G  +     +   +    +
Sbjct: 367 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 426

Query: 550 EKKVMPDASIVSIVVDLLVK 569
           +   +P+     I+ + L+K
Sbjct: 427 KSGAVPNPETFRILSESLIK 446



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 200/401 (49%), Gaps = 13/401 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
            +A  +F  M R     P   ++N L++ L  + + +      + +    +  N++TY+ 
Sbjct: 62  GKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSS 121

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I    K  +    +     ++ +   P+   FN +++G    + + +A  ++  +   G
Sbjct: 122 IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 181

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            +P+ ++Y+ LI+GL + G    +L +  EMA    G +     PN +T+ST+I GLC+ 
Sbjct: 182 YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYV-----PNVITFSTLIHGLCRT 236

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G ++KA  +F  M +    P+  TY +LI GLC A    +A+ LF +M    + P  V +
Sbjct: 237 GELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAY 296

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQ-RGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           N ++   CK   MDEA +L   M    G++P   T+NTL+DGFC +GK+ RA EL   M 
Sbjct: 297 NSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG 356

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           + G   D  +Y ILI G  +  +++EAL +Y++M  K      V+  +   GL +   ++
Sbjct: 357 TKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNID 416

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            A  +F+  ++ G   +  T+    + L K G + +A +L 
Sbjct: 417 QAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 174/331 (52%), Gaps = 9/331 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P+++ +N ++  F +   +      +  ++ S + P+  +++ LI GL    ++ 
Sbjct: 144 AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLD 203

Query: 149 EAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           E+  + +++  +A G  PNVIT++TLI+GLCRTG    AL +F  M          CKPN
Sbjct: 204 ESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPN 257

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+T+I GLC+   V +A+ LF +M    I PD V YNSLI G C     +EA++L+ 
Sbjct: 258 KYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYR 317

Query: 267 EMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           EM    G+QP++VTFN ++D  CK  K+  A+ L+  M  +G+  + CTY  L+ G    
Sbjct: 318 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRA 377

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            K++ A E++  M       D VS    + G CK   +++A +++      G  P   T+
Sbjct: 378 TKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
             L   L ++ +VE A KL +  +   + A 
Sbjct: 438 RILSESLIKLGRVEDAQKLMEPAKARDITAQ 468



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 3/270 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            Y+ ++      G + +A E+F +M+S  C    V+YN+LIN  C   E  +AL L++ M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 374 V-SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
              K ++P   TYNTL  GL      E A KL  EM+   +AA+  TY++ I  L K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             E+ ++   +    C  D+ A+N ++ G  +S  ++ A E++  +      P+ V+Y+I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAA--PDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           +I GL   G++D++  +  +M   AA   P+VITF  LIHG  R  E  K  E+   M E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
               P+    + ++  L + E  +++   F
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELF 281



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 1/124 (0%)

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           KC +   AY+ ++  L K+G L  A E+F ++     VP++VTYN++I   CN G+  KA
Sbjct: 5   KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64

Query: 507 RDLFLDME-ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            DLF  M+ E    PD  T++ LI G           +LL +M++K +  +    S ++ 
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124

Query: 566 LLVK 569
            LVK
Sbjct: 125 SLVK 128


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/345 (37%), Positives = 192/345 (55%), Gaps = 6/345 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  PN+Y +NIL++ FCKIG V    + F  I R    P+  +FN+LI G      + E 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L + +++    P+V TY+ LINGLC+      A  LF+EM     E+G+V  PN VT+
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC----EMGLV--PNGVTF 334

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+IDG CK G +D A   F  MKD  I PD++TYN+LI+GLC   D  EA++L  EM+ 
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG 394

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G +P  +TF  +MD  CK+  MD A  + D MV+ G+  +   +  L+ G C  G++  
Sbjct: 395 NGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD 454

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE +   M S G K DD +Y ++I+ +CK  +V+    L +EM   G  P VVTYN L  
Sbjct: 455 AERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMN 514

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           G  +  Q+++A  L   M    V  +  T+   +DG CK+G  ++
Sbjct: 515 GFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD 559



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 206/378 (54%), Gaps = 9/378 (2%)

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
           +G  PNV  +N L++G C+ G  M A  +F+E++          +P+ V+++T+I G C+
Sbjct: 220 YGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRG------LRPSVVSFNTLISGYCR 273

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              V++   L   M+ E I+PDV TY++LI+GLC  +   EA  LF EM + G+ P+ VT
Sbjct: 274 SKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVT 333

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F  ++D  CK+ K+D A R  ++M  RG+RP+  TYN L++G C  G +  A +L   M 
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMI 393

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G K D +++  L++G CK+ +++ AL +   MV +GI+   V +  L  GL    +V 
Sbjct: 394 GNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVR 453

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A ++  +M   G   D  TYT  ID  CK G +    +L + ++       +  YN L+
Sbjct: 454 DAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALM 513

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G CK G++K A  L  ++ +  +VPN +T+NI++ G C  G    + D  +   E    
Sbjct: 514 NGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS---SVDFKIFNGEKGLV 570

Query: 520 PDVITFDMLIHGFIRINE 537
            D  ++  L++  I+I++
Sbjct: 571 SDYASYTALVNESIKISK 588



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 207/386 (53%), Gaps = 6/386 (1%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN   ++ ++ G CK G V  A+ +F ++    + P VV++N+LI G C + +  E   L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M  + + P V T++ +++ LCK  +++EA+ L D M + G+ PN  T+ TL+DG C 
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            GKI+ A   F  M+  G + D ++YN LING C++ +++EA  L  EM+  G KP  +T
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           + TL  G  +   ++ AL++ D M  +G+  D   +T  I GLC++G + +A  + + + 
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + D   Y  +ID  CK G +K   +L   +     VP VVTYN ++ G C  GQM 
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+ L   M      P+ ITF++L+ G  +    S V+  +   ++  V   AS  ++V 
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCK--HGSSVDFKIFNGEKGLVSDYASYTALVN 581

Query: 565 DLLVKNEISLKSL---PSFL-VQERQ 586
           + +  ++  LKS+   P+ + +Q RQ
Sbjct: 582 ESIKISKDQLKSVLECPTHIGIQYRQ 607



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 183/337 (54%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
            +L++ D    P+V  +N L+HG C   D   A+ +F E+  +G++PSVV+FN ++   C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +++ ++E   L  +M    + P+  TY+ L++G C   ++  A  LF  M  MG   + V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           ++  LI+G CK+ +++ AL  +  M  +GI+P ++TYN L  GL     ++ A KL +EM
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
             +G   D  T+TT +DG CK+G +  A+E+   +     ELD  A+  LI GLC+ GR+
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           + A  +   +      P+  TY ++I   C  G +     L  +M+ +   P V+T++ L
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNAL 512

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           ++GF +  +      LLH M   +V+P+    +I++D
Sbjct: 513 MNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLD 549



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 196/368 (53%), Gaps = 15/368 (4%)

Query: 64  PPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V  FNIL+    K       +     ++  GL P++ ++N LI+ +C+   V  GF+
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +     +P+  T+++LI GL  ESR+ EA  LF ++   G  PN +T+ TLI+G C
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G   +AL  FE M +     G+  +P+ +TY+ +I+GLC++G + +A+ L  +M    
Sbjct: 343 KHGKIDLALRNFEIMKDR----GI--RPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD +T+ +L+ G C   D + A  +   M+++G++   V F  ++  LC++ ++ +A 
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           R+L  M+  G +P+  TY  ++D FC  G +    +L   M+  G     V+YN L+NG+
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +++ A  L   M++  + P  +T+N L  G  + H      K+F+     G+ +D 
Sbjct: 517 CKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCK-HGSSVDFKIFN--GEKGLVSDY 573

Query: 418 RTYTTFID 425
            +YT  ++
Sbjct: 574 ASYTALVN 581



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 132/263 (50%)

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  PN   +N LM GFC +G +  A  +F  +   G +   VS+N LI+GYC++K VEE 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L   M S+ I P V TY+ L  GL +  +VE A  LFDEM   G+  +  T+TT IDG
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            CK+G I  A+  F  ++      D+  YN LI+GLC+ G LK A +L   +      P+
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            +T+  ++ G C DG MD A ++   M E     D + F  LI G  R         +L 
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            M      PD    ++V+D   K
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCK 483



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 106/211 (50%)

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           N++       Y E++  G  P V  +N L  G  +I  V +A  +FDE+ R G+     +
Sbjct: 204 NQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVS 263

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           + T I G C++  + E   L   +   +   D+  Y+ LI+GLCK  R++ A  LF  + 
Sbjct: 264 FNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC 323

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              LVPN VT+  +I G C  G++D A   F  M++    PD+IT++ LI+G  R  +  
Sbjct: 324 EMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLK 383

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +  +LL++M      PD    + ++D   K+
Sbjct: 384 EARKLLNEMIGNGFKPDKITFTTLMDGCCKD 414



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 69/137 (50%)

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++  +N L+ G CK G +  A  +F  +    L P+VV++N +I G C    +++   L 
Sbjct: 225 NVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLK 284

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             ME    +PDV T+  LI+G  + +   + N L  +M E  ++P+    + ++D   K+
Sbjct: 285 SVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKH 344

Query: 571 EISLKSLPSFLVQERQG 587
                +L +F + + +G
Sbjct: 345 GKIDLALRNFEIMKDRG 361


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 236/472 (50%), Gaps = 19/472 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++NILL +L KN   D        +++ G  P+  +Y  LI+  CK+G+V      
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE---- 234

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R L   FTP+   +N+LI G+  E    EA  L  ++   G +PNVI+Y T+IN L  
Sbjct: 235 -ARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSD 293

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            G+  ++L +  +M A G       C PN  T++++I G   +G   +A   + +M  E 
Sbjct: 294 AGNVELSLAVLAKMFARG-------CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P+VV YN+L+HGLC      +A  +F +M   G  P+V T++ ++D   K   +D AS
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            + + M+  G  PN   Y  ++D  C     N+A  L  +M+   C  + V++N  I G 
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C +  V+ A+ ++ +M + G  P   TYN L   L +  +   A  L  +M+  G+  + 
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T I G C  G + EA+EL   + +   + D    N +ID  CK G++  A +L   
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
           L  G   P+++ Y  +I G+C    +++A      M     +P+V T+++L+
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 236/469 (50%), Gaps = 11/469 (2%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I  + + G        F R+      P    +N ++  L  E+R      +++ +K  G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EPNV TYN L+  LC+      A  L  EM++        C P+ V+Y+T+I  LCK G
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG------CDPDEVSYTTLISSLCKLG 230

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V +A+ L +     +  P V  YN+LI+G+C    + EA +L  EMM++G+ P+V+++ 
Sbjct: 231 KVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I++ L     ++ +  +L  M  RG  PN  T+ +L+ GF L G  + A + +  M   
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   + V+YN L++G C  + + +A+S++ +M   G  P V TY+ L  G  +   ++ A
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++++ M   G   +   YT  +D LC+N    +A  L   +++  C  +   +N  I G
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC SGR+ +A ++F  + +    PN  TYN ++  L  D +  +A  L  DME      +
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           ++T++ +I+G+       +  ELL KM  +   PDA  V+IV+D   K 
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 242/512 (47%), Gaps = 17/512 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N +L +L     +       + +   G+ PN++TYNIL+   CK  RV      
Sbjct: 144 PTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKL 203

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  ++ +LI  L    ++ EA  L     A    P+V  YN LING+C+
Sbjct: 204 LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCK 258

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  L +EM N          PN ++Y+TII+ L   G V+ + A+  +M     
Sbjct: 259 EYTFEEAFQLLDEMMNKG------IDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P++ T+ SLI G       +EA   +  M+ +GV P+VV +N +M  LC  R + +A  
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M   G  PN  TY+ L+DG+   G ++ A E++  M + GC  + V+Y  +++  C
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +N    +A  L   M  +   P  VT+NT   GL    +V+ A+K+FD+M   G   +T 
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   +D L K+    EA  L + +     EL++  YN +I G C +G L  A EL   +
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+ +T NI+I   C  G+++ A  L   +      PD+I +  LI G       
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +    L +M  + + P+ +  +++V  L  N
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 190/401 (47%), Gaps = 34/401 (8%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLA-SLAKNKHYD----TRLNATGLFPNLYTYN 100
           T  EAF + D M+     P  +S   I+ A S A N         ++ A G  PNL+T+ 
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            LI  F   G        + R++R    PN   +N+L+ GL ++  + +A ++F +++  
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEIN 380

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV------------------ 202
           GC PNV TY+ LI+G  + G    A  ++  M        VV                  
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQA 440

Query: 203 -----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
                      C PNTVT++T I GLC  G VD A  +F QM +    P+  TYN L+  
Sbjct: 441 YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDS 500

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           L     + EA  L  +M  +G++ ++VT+N I+   C    + EA  LL  MV RG +P+
Sbjct: 501 LLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPD 560

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
           A T N ++D +C  GK+N A +L   + +     D ++Y  LI+G C +  VEEA+   R
Sbjct: 561 AITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLR 620

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
            M+S+GI P V T+N L   LF       A++  D +   G
Sbjct: 621 RMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 10/389 (2%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +AL  F+ +AN         K   +TY  +I+ L  E  +D  + L  QMK E I+    
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            + S+I     A    +A + F  M D  V+P+V  +N I+D L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            + G+ PN  TYN L+   C   +++ A +L   M S GC  D+VSY  LI+  CK  +V
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +EA    RE+ +    P+V  YN L  G+ + +  E A +L DEM   G+  +  +YTT 
Sbjct: 233 KEA----REL-AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+ L   G +  ++ +   +    C  ++  +  LI G    G    A + +  +    +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VPNVV YN ++ GLC+   +  A  +F  ME N   P+V T+  LI G+ +  +    +E
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           + + M      P+    + +VD+L +N +
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSM 436


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 236/446 (52%), Gaps = 15/446 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN  TF+ LI GL    R+ EA   + ++    C PN+   N L+  LC+ G    A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNS 247
           F          G+ C P+ +T + +I+G C+   +DKA  LF +M K+  + P+  TY +
Sbjct: 61  FR---------GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQR 306
           +I   C  +  ++A++L  E         V+    +    CK +++DEA +LL D++ ++
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
             +P+   +N ++ GFC  G++  A E+  ++ SMGC  + V+Y  LI+G+CK+  + EA
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 367 LSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           L L++ + S+    +P VVT+N L  GL +  ++EHA +L  +M+   + ADT TYTT +
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           DGLCK G   E   +F  +    C   +  Y  L+   CK+G L+ A ++  S+    + 
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP 349

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V TY ++++GL  +G++  A + F  +      P  + +  L+ G  +     +  + 
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKY 409

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKN 570
             +M ++++ PD +   ++V++L K 
Sbjct: 410 YVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 227/440 (51%), Gaps = 13/440 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN +T+++LI   CK GR+      + ++L     PN    N L+  L    ++ +A A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F   +   C P+VIT N LING C       AL LF EM      +     P   TY+ I
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALV-----PEATTYTAI 112

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-G 272
           I   CK   +D+A+ L  +      + DV+   S+  G C A   +EA +L ++M+++  
Sbjct: 113 IKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P +V +NVI+   CK  ++ EA  +L+ +V  G  PNA TY TL+DGFC  G ++ A 
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 333 ELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           +LF  + S     + + V++N LI+G CK   +E A  L ++M ++ ++    TY TL  
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +     ++F+EM R+G      TYTT +   CK G + +A ++ R++       
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP 350

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  Y  L++GL ++G+++ A E F  +      P  V Y+ +++G C    +D+A   +
Sbjct: 351 DVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYY 410

Query: 511 LDMEENAAAPDVITFDMLIH 530
           ++M +   APD  T  +L+ 
Sbjct: 411 VEMLDRRLAPDPATCKLLVE 430



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 207/429 (48%), Gaps = 20/429 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNI 101
            EA   ++ ML  H   P +   N+LLASL +    D    A  +F      P++ T NI
Sbjct: 20  GEAVECYNQMLERH-CVPNLRDINLLLASLCQAGKMD---QAMAIFRGIQCSPSVITLNI 75

Query: 102 LINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           LIN FC++  +      F  + ++    P A T+ ++IK      R+ +A  L  +  + 
Sbjct: 76  LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SS 133

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            C  +VI   ++  G C+      A  L  +M           KP+ V ++ II G CK 
Sbjct: 134 CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKA 188

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF--IEMMDQGVQPSVV 278
           G V +A  +   +      P+ VTY +LI G C + + +EA +LF  +   D   +P+VV
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFN ++  LCK  +++ A  L+  M  R +R +  TY TLMDG C  G+ +    +F  M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              GC    V+Y  L++ +CK   +++A  + R MV+KGI P V TY  L  GLFE  +V
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A + F+++ R+        Y+  + G CK   + EAV+ +  +   +   D      L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 459 IDGLCKSGR 467
           ++ LCK GR
Sbjct: 429 VEMLCKRGR 437



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 7/248 (2%)

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           ++++LI G CK   + EA+  Y +M+ +   P +   N L   L +  +++ A+ +F  +
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI 64

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGR 467
           Q    +    T    I+G C+   + +A+ELF  + +      +   Y  +I   CK  R
Sbjct: 65  Q---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFD 526
           L  A +L           +V+    + +G C   ++D+A  L LDM E+ +A PD++ ++
Sbjct: 122 LDQARQLL--EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWN 179

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           ++IHGF +     +  E+L  +     +P+A   + ++D   K+    ++L  F V   +
Sbjct: 180 VIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 587 GEVGESNV 594
               E NV
Sbjct: 240 DHHAEPNV 247


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 238/472 (50%), Gaps = 41/472 (8%)

Query: 149 EAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +A  LF ++   F C+ +V ++N+++N +   G     L  ++ + N N  + +   PN 
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           ++++ +I  LCK  FVD+A  +F  M +    PD  TY +L+ GLC     +EA  L  E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  +G  PS V +NV++D LCK   +   ++L+D M  +G  PN  TYNTL+ G CL GK
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNK-------------------------- 361
           +++A  L   M S  C  +DV+Y  LING  K +                          
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367

Query: 362 ---------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
                    + EEA+SL+R+M  KG KP +V Y+ L  GL    +   A ++ + M   G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +  TY++ + G  K G   EAV++++ +    C  +   Y+ LIDGLC  GR+K A 
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM---EENAAAPDVITFDMLI 529
            ++  +    + P+ V Y+ +I+GLC  G MD A  L+ +M   EE  + PDV+T+++L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            G     + S+  +LL+ M ++   PD    +  ++ L +   S     SFL
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 254/536 (47%), Gaps = 45/536 (8%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNAT---GLFPNL 96
           P++A  +F  M+        V SFN +L  +          + YD  +N+     + PN 
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187

Query: 97  YTYNILINCFCKIGRVSLGFIAF-GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
            ++N++I   CK+  V      F G   R C  P+  T+ +L+ GL  E RI EA  L  
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCL-PDGYTYCTLMDGLCKEERIDEAVLLLD 246

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++++ GC P+ + YN LI+GLC+ G       L + M          C PN VTY+T+I 
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG------CVPNEVTYNTLIH 300

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLC +G +DKA +L  +M      P+ VTY +LI+GL       +A RL   M ++G   
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +   ++V++  L K  K +EA  L   M ++G +PN   Y+ L+DG C  GK N A+E+ 
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M + GC  +  +Y+ L+ G+ K    EEA+ +++EM   G       Y+ L  GL  +
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL---KCELDI 452
            +V+ A+ ++ +M   G+  DT  Y++ I GLC  G +  A++L+  +      K + D+
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC-NDGQMDKARDLFL 511
             YN L+DGLC    +  A +L  S+      P+V+T N  +  L       DK R    
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600

Query: 512 D--------------------MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           +                    M     AP   T+ M++     I +P K+N  + K
Sbjct: 601 ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVR---EICKPKKINAAIDK 653



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 178/363 (49%), Gaps = 15/363 (4%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI-----HGLCHANDWNEAKR 263
           T S++I+     G  D  + L  +++ EN    V+   S I     +G  H  D  +A  
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPD--KAVD 133

Query: 264 LFIEMMDQ-GVQPSVVTFN----VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           LF  M+D+   + SV +FN    VI++E   +R ++    +++  +   + PN  ++N +
Sbjct: 134 LFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C +  ++RA E+F  M    C  D  +Y  L++G CK + ++EA+ L  EM S+G 
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P+ V YN L  GL +   +    KL D M   G   +  TY T I GLC  G + +AV 
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   +   KC  +   Y  LI+GL K  R   A  L  S+       N   Y+++I GL 
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G+ ++A  L+  M E    P+++ + +L+ G  R  +P++  E+L++M     +P+A 
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433

Query: 559 IVS 561
             S
Sbjct: 434 TYS 436


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 243/471 (51%), Gaps = 22/471 (4%)

Query: 73  LLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           +L  L + + +D+       + + GL P+++ Y++L  C  K G  S        +    
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG 263

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             PN   +   I+ L  E+++ EA  +F  +K  G  PN+ TY+ +I+G C+TG+   A 
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY 323

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L++E+            PN V + T++DG CK   +  A++LF+ M    ++P++  YN
Sbjct: 324 GLYKEILVAE------LLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYN 377

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LIHG C + +  EA  L  EM    + P V T+ ++++ LC   ++ EA+RL   M   
Sbjct: 378 CLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNE 437

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            + P++ TYN+L+ GFC    I +A +L   M S G + + ++++ LI+GYCK + ++ A
Sbjct: 438 RIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAA 497

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + LY EM  KGI P VVTY TL    F+   ++ AL+L+ +M   G+  +  T+   +DG
Sbjct: 498 MGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 557

Query: 427 LCKNGYIIEAVELF---------RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             K G + +A++ +         +++    C   +  + CLI+GLC++G +  A   F  
Sbjct: 558 FWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYV-GFTCLIEGLCQNGYILRASRFFSD 616

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           +  G + P++ +Y  M++    + ++     L  DM +    P+++   +L
Sbjct: 617 MKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLL 667



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 224/463 (48%), Gaps = 14/463 (3%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N   +  R    ++ +  ++     P+   ++ L +    +    +   L  ++ + G
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG 263

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +PNV  Y   I  LCR      A  +FE M       GVV  PN  TYS +IDG CK G
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIH----GVV--PNLYTYSAMIDGYCKTG 317

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A  L+ ++    + P+VV + +L+ G C A +   A+ LF+ M+  GV P++  +N
Sbjct: 318 NLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYN 377

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   CK+  M EA  LL  M    + P+  TY  L++G C   ++  A  LF  M++ 
Sbjct: 378 CLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNE 437

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
                 V+YN LI+G+CK   +E+AL L  EM S G++P ++T++TL  G  ++  ++ A
Sbjct: 438 RIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAA 497

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           + L+ EM   G+  D  TYTT ID   K   + EA+ L+  +       +   + CL+DG
Sbjct: 498 MGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 557

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVT--------YNIMIQGLCNDGQMDKARDLFLDM 513
             K GRL  A + +          ++V         +  +I+GLC +G + +A   F DM
Sbjct: 558 FWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDM 617

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +     PD+ ++  ++   +R    +    L   M +  ++P+
Sbjct: 618 KSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN 660



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 218/455 (47%), Gaps = 15/455 (3%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +P++    +++ GL    R       +  + + G  P+V  Y+ L     + G       
Sbjct: 195 SPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEK 254

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L +EM +    +GV  KPN   Y+  I  LC+E  +++A+ +F  MK   + P++ TY++
Sbjct: 255 LLDEMTS----LGV--KPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSA 308

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I G C   +  +A  L+ E++   + P+VV F  ++D  CK R++  A  L   MV+ G
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFG 368

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           V PN   YN L+ G C  G +  A  L   MES+    D  +Y ILING C  + + EA 
Sbjct: 369 VDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEAN 428

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L++ M ++ I P+ VTYN+L  G  + + +E AL L  EM   GV  +  T++T IDG 
Sbjct: 429 RLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGY 488

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK   I  A+ L+  + I     D+  Y  LID   K   +K A  L+  +    + PN 
Sbjct: 489 CKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPND 548

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT--------FDMLIHGFIRINEPS 539
            T+  ++ G   +G++  A D +L+  + A    ++         F  LI G  +     
Sbjct: 549 HTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYIL 608

Query: 540 KVNELLHKMKEKKVMPD-ASIVSIVVDLLVKNEIS 573
           + +     MK   V PD  S VS++   L +  I+
Sbjct: 609 RASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRIT 643



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 197/412 (47%), Gaps = 3/412 (0%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           + + LFE+    + E+   C P++     I++GL +    D     +  M    + PDV 
Sbjct: 177 LEMGLFEDALWVSREMR--CSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 234

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y+ L          ++ ++L  EM   GV+P+V  + + + +LC+  KM+EA ++ +LM
Sbjct: 235 IYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELM 294

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              GV PN  TY+ ++DG+C  G + +A  L+  +       + V +  L++G+CK +E+
Sbjct: 295 KIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 354

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
             A SL+  MV  G+ P +  YN L  G  +   +  A+ L  EM+   ++ D  TYT  
Sbjct: 355 VAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTIL 414

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+GLC    + EA  LF+ ++  +       YN LI G CK   ++ A +L   +    +
Sbjct: 415 INGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGV 474

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN++T++ +I G C    +  A  L+ +M      PDV+T+  LI    +     +   
Sbjct: 475 EPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALR 534

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNVK 595
           L   M E  + P+    + +VD   K E  L     F ++  Q   G+S V+
Sbjct: 535 LYSDMLEAGIHPNDHTFACLVDGFWK-EGRLSDAIDFYLENNQAATGKSIVQ 585



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 183/380 (48%), Gaps = 11/380 (2%)

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
            N  E++ +    IGV        +S +I    + G  + A  +  +M+    +PD    
Sbjct: 153 FNALEDIQSPKFSIGV--------FSLLIMEFLEMGLFEDALWVSREMR---CSPDSKAC 201

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            ++++GL     ++     +  M+ +G+ P V  ++V+     K     +  +LLD M  
Sbjct: 202 LAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTS 261

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            GV+PN   Y   +   C   K+  AE++F  M+  G   +  +Y+ +I+GYCK   + +
Sbjct: 262 LGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQ 321

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A  LY+E++   + P VV + TL  G  +  ++  A  LF  M + GV  +   Y   I 
Sbjct: 322 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIH 381

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           G CK+G ++EA+ L   +  L    D+  Y  LI+GLC   RL  A  LF  + +  + P
Sbjct: 382 GQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFP 441

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           + VTYN +I G C +  ++KA DL  +M  +   P++ITF  LI G+ ++        L 
Sbjct: 442 SSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLY 501

Query: 546 HKMKEKKVMPDASIVSIVVD 565
            +M  K ++PD    + ++D
Sbjct: 502 FEMTIKGIVPDVVTYTTLID 521



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 159/337 (47%), Gaps = 28/337 (8%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRL---FIEMMDQGVQPSVVT---FNVIMDELCKNRKMD 294
           D+ +++++IH L  A+ +  A+ L    IE + +  +P+ ++   FN + D       + 
Sbjct: 108 DLQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNISHRLFNALEDIQSPKFSIG 167

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
             S L+   ++ G+  +A                     L+ S E M C  D  +   ++
Sbjct: 168 VFSLLIMEFLEMGLFEDA---------------------LWVSRE-MRCSPDSKACLAIL 205

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           NG  + +  +     Y+ M+S+G+ P V  Y+ LF   F+        KL DEM   GV 
Sbjct: 206 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVK 265

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +   YT +I  LC+   + EA ++F  ++I     ++  Y+ +IDG CK+G L+ A+ L
Sbjct: 266 PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL 325

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           +  +    L+PNVV +  ++ G C   ++  AR LF+ M +    P++  ++ LIHG  +
Sbjct: 326 YKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCK 385

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
                +   LL +M+   + PD    +I+++ L   E
Sbjct: 386 SGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEE 422



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 20/261 (7%)

Query: 65  PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+        LA+      R+    +FP+  TYN LI+ FCK   +      
Sbjct: 406 PDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDL 465

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  S   PN  TF++LI G      I  A  L+ ++   G  P+V+TY TLI+   +
Sbjct: 466 CSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFK 525

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             +   AL L+ +M     E G+   PN  T++ ++DG  KEG +  A   +L+      
Sbjct: 526 EANMKEALRLYSDML----EAGI--HPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAAT 579

Query: 239 NPDVVT--------YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
              +V         +  LI GLC       A R F +M   GV P + ++  ++    + 
Sbjct: 580 GKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLRE 639

Query: 291 RKMDEASRLLDLMVQRGVRPN 311
           +++ +   L   M++ G+ PN
Sbjct: 640 KRITDTMMLHCDMIKTGILPN 660



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 10/223 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+    K  + +  L+      ++G+ PN+ T++ LI+ +CK+  +      
Sbjct: 441 PSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGL 500

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +      P+  T+ +LI     E+ + EA  L++ +   G  PN  T+  L++G  +
Sbjct: 501 YFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 560

Query: 179 TGHTMIALNLFEE---MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            G    A++ + E    A G   +   C    V ++ +I+GLC+ G++ +A   F  MK 
Sbjct: 561 EGRLSDAIDFYLENNQAATGKSIVQRSCW-KYVGFTCLIEGLCQNGYILRASRFFSDMKS 619

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
             + PD+ +Y S++          +   L  +M+  G+ P+++
Sbjct: 620 GGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLM 662


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 247/477 (51%), Gaps = 21/477 (4%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ TY  LI+ +C+ GR++    A   I      P+  T+N+++KGL    +  +A  L 
Sbjct: 183 NVVTYTALIDGYCRSGRLA---DALRLIASMPVAPDTYTYNTVLKGLCCAKQWEQAEELM 239

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++    C PN +T+ T I   C+ G    A+ L E+M          C P+ + YST++
Sbjct: 240 REMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG------CTPDVIIYSTLV 293

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G  + G VD+A  L   M      P+ V YN+ + GLC A  W E   L  EM+ +   
Sbjct: 294 NGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCP 350

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  TF+ +++ LC+NR ++ A  +L+ M + G  P+  +YNT++  F       RA++ 
Sbjct: 351 PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCF---SDQARADDA 407

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ++SM CK D +S+N ++   CK K   +A+ L  +M+ K  +   +T+N L   L +
Sbjct: 408 LKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQ 467

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             QV+ A+++F+ M +     D  TY++ I+G  + G    A +LFR++    C  DI +
Sbjct: 468 NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFS 524

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN  + GLC + R   A EL   +     +PN VT+NI+I  LC  G +++A D++  M 
Sbjct: 525 YNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMP 584

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +    PD+ T++ LI+G+   +E  ++++ L  +      PD    + ++  L + E
Sbjct: 585 KYGITPDIFTYNALINGY---SEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAE 638



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 208/404 (51%), Gaps = 17/404 (4%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   + N LIK L A  R+ +A  +   LKA G   + +++NTL+ G CR G    A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERV 172

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            E  A  +G        N VTY+ +IDG C+ G +  A  L   M    + PD  TYN++
Sbjct: 173 VE-AARASGTA------NVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTV 222

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           + GLC A  W +A+ L  EM+     P+ VTF   +   C+N  +D A  LL+ M + G 
Sbjct: 223 LKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGC 282

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+   Y+TL++GF   G+++ A +L   + +M C+ + V YN  + G C     EE   
Sbjct: 283 TPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNAALKGLCIAGRWEEVGE 339

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L  EMV K   P   T++TL   L +   VE+A+++ ++MQ+ G   D  +Y T I    
Sbjct: 340 LIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFS 399

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
                 +A++L ++   + C+ D  ++N ++  LCK+ R   A EL   +       N +
Sbjct: 400 DQARADDALKLLKS---MLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEM 456

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           T+NI+I  LC +GQ+  A ++F  M +    PD++T+  LI+GF
Sbjct: 457 TFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF 500



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 220/479 (45%), Gaps = 24/479 (5%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P  P   ++N +L  L   K ++        +      PN  T+   I  FC+ G +   
Sbjct: 211 PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRA 270

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++ +   TP+   +++L+ G     R+ EA  L   L    C PN + YN  + G
Sbjct: 271 VELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNAALKG 327

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC  G       L  EM   +      C PN  T+ST+I+ LC+   V+ A  +  QM+ 
Sbjct: 328 LCIAGRWEEVGELIAEMVRKD------CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
               PDVV+YN++I         ++A +L   M+    +P  ++FN ++  LCK ++  +
Sbjct: 382 YGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYD 438

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  L+  M+++  R N  T+N L+D  C  G++  A E+F  M    C  D V+Y+ LIN
Sbjct: 439 AVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN 498

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+ +    E A  L+R M  +     + +YN    GL    + + A +L  +M  +    
Sbjct: 499 GFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLP 555

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T+   I  LC+ G +  A++++  +       DI  YN LI+G  + GRL  A +  
Sbjct: 556 NEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFL 615

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
            ++P     P+ ++YN +++GLC   +   A  L  +M      P+ +TF      FI+
Sbjct: 616 STMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 671


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 215/400 (53%), Gaps = 9/400 (2%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YNTLI GLC+      AL L   MA  NG        + VTY+T+IDGLCK G +D A+A
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMA-ANGY-----DASVVTYTTLIDGLCKSGDLDAAQA 66

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L  +M D    P+VVTY +LI GLC A   ++A +    M+  G +P +VT+N ++  LC
Sbjct: 67  LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLC 126

Query: 289 KNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
              +MD+A  +L +LM++ G  P+  TYNT + G C  GK+++  E+   M+  G   D 
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDV 186

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V++  +I+G CK   +++A  +++ M+ +G  P  +TY+ +   L   ++++   ++ + 
Sbjct: 187 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEH 246

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M + G  A + TY   I  L + G I  A   +       C +++  +N  I  LC+SG+
Sbjct: 247 MVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGK 306

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFD 526
              A  +   +     +PN+++YN +I GLC  G +D A  L   M +     PDVI F+
Sbjct: 307 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 366

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKV-MPDASIVSIVVD 565
            LI GF +    S+  +LL +MK K + +PD    + ++D
Sbjct: 367 TLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMID 406



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 222/426 (52%), Gaps = 9/426 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  +AA +N+LI GL    +   A  L   + A G + +V+TY TLI+GLC++G    A 
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L ++MA+        C PN VTY+ +IDGLCK      A     +M      PD+VTYN
Sbjct: 66  ALLQKMADAG------CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYN 119

Query: 247 SLIHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           SLIHGLC AN  ++A  +  E+M + G  P VVT+N  +  LCK  K+D+   +L+ M +
Sbjct: 120 SLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR 179

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ P+  T+ +++ G C   +I+ A ++F  M   GC  D ++Y+I+++   +   ++ 
Sbjct: 180 GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              +   MV  G      TY  L   L     +E A   +++    G   +  T+  FI 
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLV 484
            LC++G    A  +   +       ++ +YN +IDGLCKSG +  AW+L    L  G   
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 359

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           P+V+ +N +I G C  G++ +A+ L  +M+ +N   PDV+T++ +I G  +     +   
Sbjct: 360 PDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKL 419

Query: 544 LLHKMK 549
           LL +M+
Sbjct: 420 LLEEMQ 425



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 205/410 (50%), Gaps = 13/410 (3%)

Query: 70  FNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N L+A L K +     L       A G   ++ TY  LI+  CK G +        ++ 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
            +   PN  T+ +LI GL    R  +A     ++   GCEP+++TYN+LI+GLC      
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  + +E+   +G I     P+ VTY+T I GLCK G +DK   +  +M    I+PDVV
Sbjct: 133 DAGLVLQELMIESGRI-----PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T+ S+I GLC AN  ++A ++F  M+++G  P  +T+++++D L +  ++D    +L+ M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V+ G    + TY  L+      G I  A   +      GC  +  ++N  I   C++ + 
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA-DTRTYTT 422
             A ++   M+  G  P +++YN +  GL +   V+ A KL  +M   G    D   + T
Sbjct: 308 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNT 367

Query: 423 FIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKFA 471
            I G CK G + +A +L + ++    C  D+  YN +IDG  K G LK A
Sbjct: 368 LISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQA 417



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 181/390 (46%), Gaps = 50/390 (12%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++  L+  L K+   D       ++   G  PN+ TY  LI+  CK  R         
Sbjct: 45  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 104

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK-AFGCEPNVITYNTLINGLCRT 179
           R+LRS   P+  T+NSLI GL   +R+ +A  +  +L    G  P+V+TYNT I+GLC+ 
Sbjct: 105 RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKA 164

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G     L + EEM  G         P+ VT+ +II GLCK   +D A  +F  M +    
Sbjct: 165 GKLDKGLEMLEEMDRGG------ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV 218

Query: 240 PDVVTYN-----------------------------------SLIHGLCHANDWNEAKRL 264
           PD +TY+                                    LIH L  A D   A   
Sbjct: 219 PDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWA 278

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           + + M+ G    V T N  +  LC++ K   A  +L  M++ G  PN  +YN ++DG C 
Sbjct: 279 YEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 338

Query: 325 MGKINRAEELFGSMESMGC-KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KPTV 382
            G ++ A +L   M   GC K D + +N LI+G+CK   + +A  L +EM +K I  P V
Sbjct: 339 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDV 398

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           VTYNT+  G  +   ++ A  L +EMQ  G
Sbjct: 399 VTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 37/333 (11%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYN 100
           P++A      MLR    P  V+  +++      N+  D  L        +G  P++ TYN
Sbjct: 96  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYN 155

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
             I+  CK G++  G      + R   +P+  TF S+I GL   +RI +A  +F  +   
Sbjct: 156 TFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 215

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN------------------GEIGVV 202
           GC P+ +TY+ +++ L R         + E M                      G+I   
Sbjct: 216 GCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESA 275

Query: 203 -----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
                      C     T++  I  LC+ G    AK + L M +    P++++YN +I G
Sbjct: 276 SWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDG 335

Query: 252 LCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV-R 309
           LC + + ++A +L  +M+D G  +P V+ FN ++   CK  ++ +A +LL  M  + +  
Sbjct: 336 LCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICV 395

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           P+  TYNT++DG    G + +A+ L   M+++G
Sbjct: 396 PDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 255/506 (50%), Gaps = 15/506 (2%)

Query: 72  ILLASLAKNKHYDT--RLNATGL----FPNLYTYNILINCFCKIGRVSLGFIAFGRILRS 125
           +LL +  K K ++   RL    L    FPN   Y  +IN FCK G+V   F     +   
Sbjct: 81  VLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKER 140

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG--CEPNVITYNTLINGLCRTGHTM 183
               +    ++LI+GL  + RI EA     + K+ G  C PNVITYNT++NGLC+     
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEA---LEQFKSMGEECSPNVITYNTVVNGLCKANRID 197

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            AL LF++M     E    C+P+ ++YST+ID LCK   VDKA   F +M+     P+VV
Sbjct: 198 EALELFDDMEK-RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY+SLI GLC  +  +E   L + M ++G   +++ FN ++  L KN + ++A +  + +
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           ++ G +PN  TYN  + G C  G+++ A  +   M       D ++Y+ +I+G+CK   +
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A  ++  M+     P  VT+ TL  G  E  +   A ++ ++M   G     +TY   
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +D +C    +  A+E++  ++  K + D   Y  LI  LC++ R+  A E    +    +
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNV 496

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VPN    + +++ LC  G++D+A  +  ++ E    P   TF +L+       +    ++
Sbjct: 497 VPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASK 556

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
           LL   +    + DA+  S+ V  + K
Sbjct: 557 LL---RSPGFVADAATYSLCVAEICK 579



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 231/449 (51%), Gaps = 12/449 (2%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  NA T   L+       R  EA  L  +     C PN I Y T+ING C+ G    A 
Sbjct: 72  FQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAF 131

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L +EM     E GV  K + + +ST+I GLC++G +D+A   F  M +E  +P+V+TYN
Sbjct: 132 ELLDEMK----ERGV--KMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYN 184

Query: 247 SLIHGLCHANDWNEAKRLFIEM-----MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           ++++GLC AN  +EA  LF +M        G +P V++++ ++D LCK +++D+A     
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G  PN  TY++L+DG C + + +   EL   M+  G   + + +N +++   KN 
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           E E+A   +  ++  G KP VVTYN    GL +  +V+ A ++  EM    V  D  TY+
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYS 364

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + IDG CK G + +A ++F  + + +C      +  L+ G  +  + + A+ +   + + 
Sbjct: 365 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 424

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
             +P + TYN+++  +C    ++ A +++  M+     PD  T+  LI    R     + 
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            E L  M+   V+P+ +I   +V++L K 
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQ 513



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 227/491 (46%), Gaps = 19/491 (3%)

Query: 48  NEAFCIFDYMLRM----HPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLY 97
           +EA  +FD M +     H   P V S++ ++ +L K +  D       R+ A G  PN+ 
Sbjct: 197 DEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 256

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TY+ LI+  CK+ R S        +    F  N   FN+++  L       +A   F +L
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G +PNV+TYN  ++GLC+ G    A  +  EM            P+ +TYS+IIDG 
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK------VTPDVITYSSIIDGF 370

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G +DKA  +F +M      P  VT+ +L+HG        EA R+  +M++ G  P +
Sbjct: 371 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL 430

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T+NV+MD +C    ++ A  +   M ++  +P+  TY  L+   C   +++ A+E    
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDV 490

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME+     +    + L+   CK  EV+EA S+   +V  G +P   T+  L   L+   +
Sbjct: 491 MEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKK 550

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E A KL   ++  G  AD  TY+  +  +CK G   EAVE+   + +     D   Y  
Sbjct: 551 WEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVA 607

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++  LC   R++ A   F  +      P +VTY ++I   C+    D+A  +F  M    
Sbjct: 608 VLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAG 667

Query: 518 AAPDVITFDML 528
             P   T   L
Sbjct: 668 FTPQAQTMRTL 678



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 41/324 (12%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G Q +  T  V+++   K ++ +EA RLL   ++    PN   Y T+++GFC  G++++A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            EL   M+  G K D + ++ LI G C+   ++EAL  ++ M  +   P V+TYNT+  G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189

Query: 392 LFEIHQVEHALKLFDEMQR-----DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           L + ++++ AL+LFD+M++      G   D  +Y+T ID LCK   + +A E F+ +R +
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWEL---------------FCSLPHGVL-------- 483
            C  ++  Y+ LIDGLCK  R     EL               F ++ H +         
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 484 ------------VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
                        PNVVTYN+ + GLC  G++D+A  + L+M E+   PDVIT+  +I G
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 532 FIRINEPSKVNELLHKMKEKKVMP 555
           F +     K +++  +M   + +P
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIP 393


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 250/478 (52%), Gaps = 9/478 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++  YN+ I+CF K+G+V + +  F  +  +   P+  T+ S++  L   +R+ EA  +F
Sbjct: 130 DIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIF 189

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE-EMANGNGEIGVVCKPNTVTYSTI 213
            +++     P    YNT+I G    G    A +L E + A G       C P+ V Y+ I
Sbjct: 190 EQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKG-------CIPSVVAYNCI 242

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +  L K+G  DKA  +F +MK + + P++ TYN +I  LC A +   A ++   M + G+
Sbjct: 243 LTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGL 301

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+V T N+++D LCK +K+DEA  + + M  +   P+  T+ +L+DG    G+++ A  
Sbjct: 302 FPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYR 361

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           ++  M       + V Y  LI  + K    E+   +Y+EM+  G  P ++  NT    +F
Sbjct: 362 IYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVF 421

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  + E    LF+E++  G   DTR+Y+  I  L K G+  E  EL+  ++   C LD +
Sbjct: 422 KAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR 481

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           AYN +IDG CKSG++  A++L   +      P VVTY  ++ GL    ++D+A  LF + 
Sbjct: 482 AYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 541

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           + N    + + +  LI GF ++    +   ++ +M +K + P+    + ++D LVK E
Sbjct: 542 KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAE 599



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 155/565 (27%), Positives = 255/565 (45%), Gaps = 49/565 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  IF+ M   +   P   ++N ++        +D       R  A G  P++  YN 
Sbjct: 183 DEAVEIFEQM-EQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++ C  K G+       F  + R    PN  T+N +I  L     +  A  +   +K  G
Sbjct: 242 ILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNV T N +I+ LC+      A ++FE M         VC P+  T+ ++IDGL K+G
Sbjct: 301 LFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYK------VCSPDGATFCSLIDGLGKQG 354

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD A  ++ +M D +  P+VV Y SLI      +   +  +++ EMM  G  P ++  N
Sbjct: 355 RVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLN 414

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPN------------------------------ 311
             MD + K  + ++   L + +  RG  P+                              
Sbjct: 415 TYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQ 474

Query: 312 AC-----TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            C      YNT++DGFC  GK+N+A +L   M++MG     V+Y  +++G  K   ++EA
Sbjct: 475 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEA 534

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L+ E  S GI+   V Y++L  G  ++ +V+ A  + +EM + G+  +  T+   +DG
Sbjct: 535 YMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDG 594

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           L K   I EA+  F++++ LKC  +   Y  LI+GLCK  +   A+  +  +    L PN
Sbjct: 595 LVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPN 654

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            +TY  MI GL   G + +A  LF     +   PD  +++ +I G    N      +L  
Sbjct: 655 TITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFE 714

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNE 571
           + + K           ++D L K E
Sbjct: 715 ETRLKGCSIHTKTCVALLDALHKAE 739



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 242/502 (48%), Gaps = 9/502 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A GL P+  TY  ++   CK  R+      F ++ ++   P A  +N++I G  +  +
Sbjct: 157 MKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA +L  + +A GC P+V+ YN ++  L + G T  AL +FEEM            PN
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRD-------AMPN 269

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ II  LCK G V+ A  +   MK+  + P+V T N +I  LC A   +EA  +F 
Sbjct: 270 LPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIF- 328

Query: 267 EMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           E MD  V  P   TF  ++D L K  ++D+A R+ + M+     PN   Y +L+  F   
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +     +++  M   GC  D +  N  ++   K  E E+  +L+ E+ ++G  P   +Y
Sbjct: 389 DRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSY 448

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           + L   L +        +L+  M+  G   DTR Y T IDG CK+G + +A +L   ++ 
Sbjct: 449 SILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 508

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +     +  Y  ++DGL K  RL  A+ LF       +  N V Y+ +I G    G++D+
Sbjct: 509 MGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDE 568

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +  +M +    P+V T++ L+ G ++  E ++       MK+ K  P+     I+++
Sbjct: 569 AYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILIN 628

Query: 566 LLVKNEISLKSLPSFLVQERQG 587
            L K     K+   +   ++QG
Sbjct: 629 GLCKVRKFNKAFVFWQEMQKQG 650



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 212/469 (45%), Gaps = 7/469 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G +  + F P   T   L+       +++EA  L   ++ F   P    Y TLI  L  
Sbjct: 14  LGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSE 73

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G +   L LF +M     E+      N    +T+I    +EG VD A +L  +MK    
Sbjct: 74  VGESDRMLALFNQMQELGYEV------NVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + D+V YN  I         + A + F EM   G+ P  VT+  +M  LCK  ++DEA  
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVE 187

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           + + M Q    P A  YNT++ G+   GK + A  L     + GC    V+YN ++    
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  + ++AL ++ EM  +   P + TYN +   L +   VE A K+ D M+  G+  + R
Sbjct: 248 KKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T    ID LCK   + EA  +F  +    C  D   +  LIDGL K GR+  A+ ++  +
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERM 366

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                +PNVV Y  +I+      + +    ++ +M  +  +PD++  +  +    +  E 
Sbjct: 367 LDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGET 426

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            K   L  ++K +  +PD    SI++  LVK   + ++   +   + QG
Sbjct: 427 EKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 188/402 (46%), Gaps = 11/402 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-----TRLNATGLFPNLYTYNIL 102
           ++A+ I++ ML     P  V   +++      ++  D       +  +G  P+L   N  
Sbjct: 357 DDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTY 416

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++C  K G    G   F  I    F P+  +++ LI  L       E   L+  +K  GC
Sbjct: 417 MDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGC 476

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             +   YNT+I+G C++G    A  L EEM            P  VTY +++DGL K   
Sbjct: 477 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH------PTVVTYGSVVDGLAKIDR 530

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A  LF + K   I  + V Y+SLI G       +EA  +  EMM +G+ P+V T+N 
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC 590

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D L K  +++EA      M      PN  TY  L++G C + K N+A   +  M+  G
Sbjct: 591 LLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQG 650

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K + ++Y  +I+G  K+  V +A SL+    + G  P   +YN +  GL   ++   A 
Sbjct: 651 LKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAY 710

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +LF+E +  G +  T+T    +D L K   + +A  +   LR
Sbjct: 711 QLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLR 752



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 157/323 (48%), Gaps = 7/323 (2%)

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           +    +++  +++  EM   G  P+  T   ++    K+RK+ EA  LL +M     RP 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
              Y TL+     +G+ +R   LF  M+ +G + +      LI  + +   V+ ALSL  
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           EM S      +V YN       ++ +V+ A K F EM+ +G+  D  TYT+ +  LCK  
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180

Query: 432 YIIEAVELFRTL---RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
            + EAVE+F  +   R + C     AYN +I G   +G+   A+ L         +P+VV
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAY---AYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVV 237

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            YN ++  L   G+ DKA  +F +M+ + A P++ T++++I    +        ++   M
Sbjct: 238 AYNCILTCLGKKGKTDKALRIFEEMKRD-AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAM 296

Query: 549 KEKKVMPDASIVSIVVDLLVKNE 571
           KE  + P+   ++I++D L K +
Sbjct: 297 KEAGLFPNVRTINIMIDRLCKAQ 319



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 117/254 (46%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E++ G M   G    + +   L+    K++++ EA  L + M     +P    Y TL   
Sbjct: 11  EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L E+ + +  L LF++MQ  G   +    TT I    + G +  A+ L   ++    + D
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN  ID   K G++  AW+ F  +    LVP+ VTY  M+  LC   ++D+A ++F 
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            ME+N   P    ++ +I G+    +  +   LL + + K  +P     + ++  L K  
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250

Query: 572 ISLKSLPSFLVQER 585
            + K+L  F   +R
Sbjct: 251 KTDKALRIFEEMKR 264


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 227/452 (50%), Gaps = 12/452 (2%)

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           +A GR LR    PN  T   LI      ++  +A  LF + ++F C P V  +  LI+ L
Sbjct: 22  VAEGRPLR----PN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
             +G    A  +++++          C+ +   Y+ +I    + G +D A  +F +MK +
Sbjct: 76  VNSGEFERAELVYKKLVQKG------CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD  TY  L++ L  A    EA+  F  M+++G+ P++ T+N++MD   K  ++D A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             L   M +RG +P+  TYN L+D  C  G++  A +LF  M   GC  D  +Y+ L+NG
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
             K+  VEEA  ++REMV +G+   +V YN+L   L +   ++   KL  EM R G   D
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             ++ T +D L K      A E+F  +    C+ D+ +YN LID   + G    A ++  
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +     +P   TYN +I  L  DGQ+D+A  +  +ME     PDV+T++ L+    +  
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           E  +   L  +MK+K V PD    ++ +D L 
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLA 461



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 218/462 (47%), Gaps = 9/462 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P ++ +  LI+     G      + + ++++     +   +N LI+      ++  A  +
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F ++K  G EP+  TY  L+N L + G    A + F+ M     E G+   PN  TY+ +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML----ERGLT--PNIPTYNLL 176

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           +D   K G +D A  LF +MK     P VVTYN L+  LC A     A++LF +M   G 
Sbjct: 177 MDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P   T++ +++ L K+ +++EA ++   MV RGV  +   YN+L+      G ++R  +
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M   G   D  S+N +++   K  + + A  ++  MV  G KP +++YN L     
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                  A ++ +EM   G   +T+TY + I  L  +G + EA  +   +    C  D+ 
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN L+D L K G  + A  LF  +    + P+ ++Y + I GL  D ++D+A  LF DM
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           +      D   + +LI    R  +     +L H   E + MP
Sbjct: 477 KAVGCPVDKAMYRILIRAAHRAGDTELEAQLKH---ESQFMP 515



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 200/381 (52%), Gaps = 14/381 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIG 110
           +++  S P   ++  L+ +L K          +D  L   GL PN+ TYN+L++ F K+G
Sbjct: 126 MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLE-RGLTPNIPTYNLLMDAFRKVG 184

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           ++ +    F  + R  F P+  T+N L+  L +  R+  A  LF K+   GC P+  TY+
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           TL+NGL ++G    A  +F EM +     GV    + V Y++++  L K G +D+   L 
Sbjct: 245 TLVNGLGKSGRVEEAHKVFREMVDR----GVAV--DLVNYNSLLATLAKAGNMDRVWKLM 298

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M  +  +PD  ++N+++  L  AN  + A+ +F  M++ G +P ++++N+++D   + 
Sbjct: 299 KEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARF 358

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
               +A ++L+ MV+ G  P   TYN+L+      G+++ A  +   ME+ GC+ D V+Y
Sbjct: 359 GDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTY 418

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N L++   K  E + A  L+++M  KG++P  ++Y     GL    +++ AL LF +M+ 
Sbjct: 419 NRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA 478

Query: 411 DGVAADTRTYTTFIDGLCKNG 431
            G   D   Y   I    + G
Sbjct: 479 VGCPVDKAMYRILIRAAHRAG 499



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 4/266 (1%)

Query: 293 MDEASRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
           +D    LL  MV  G  +RPN  T   L+  +    K   A +LF   ES  C     ++
Sbjct: 11  LDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             LI+    + E E A  +Y+++V KG +     YN L        Q++ A+++F EM+ 
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D  TY   ++ L K G + EA   F  +       +I  YN L+D   K G+L  
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  LF  +      P+VVTYNI++  LC+ G++  AR LF  M  +  +PD  T+  L++
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPD 556
           G  +     + +++  +M ++ V  D
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVD 274



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 103/218 (47%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI  Y +  +  +A  L+ +  S    PTV  +  L   L    + E A  ++ ++ + G
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              D   Y   I    ++G +  A+E+FR ++I   E D   Y  L++ L K+GR++ A 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             F ++    L PN+ TYN+++      GQ+D A  LF +M+     P V+T+++L+   
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                     +L HKM      PD+   S +V+ L K+
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+  LA +   D        +   G  P++ TYN L++   K G        
Sbjct: 378 PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARL 437

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++      P+  ++   I GL  + R+ EA  LF  +KA GC  +   Y  LI    R
Sbjct: 438 FQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHR 497

Query: 179 TGHTMIALNLFEE 191
            G T +   L  E
Sbjct: 498 AGDTELEAQLKHE 510


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 256/534 (47%), Gaps = 46/534 (8%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           PP V S++ ++    K    D  L+   + PN+ TYN +I   CK   V         ++
Sbjct: 85  PPDVVSYSTVINGFFKEGDLDKMLDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 143

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           +S   P+  T+NS++ G  +  +  EA     K+++ G EP+V+TYN+L++ LC+ G   
Sbjct: 144 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  +F+ M           KP+  TY T++ G   +G + +   L   M    I+P+  
Sbjct: 204 EARKIFDSMTKRG------LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            ++ L+          EA  +F +M  QG+ P+ VT+  ++D LCK+ ++++A    + M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +  G+RP++  YN+L+   C+  K  +AEELF  M   G     + +N +I+ +CK   V
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377

Query: 364 EEALSLYREMVSKGIKPTVVTYN----------TLFLGLFEIHQVEHALKLFDEMQRDG- 412
            E+  L+  MV  G+KP ++T            +LF+ ++ I         F  M   G 
Sbjct: 378 IESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFI---------FTNMSNTGD 428

Query: 413 -------------VAADTR------TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
                         A+++       TY   + GLCKN    +A+ +F+ L ++  +L+ +
Sbjct: 429 KEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR 488

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N +ID L K GR   A +LF +     LVPN  TY +M + +   G +++   LFL M
Sbjct: 489 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 548

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           E+N    D    + ++   ++  E ++    L  + EK    +AS  S+ +DLL
Sbjct: 549 EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 602



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 232/474 (48%), Gaps = 37/474 (7%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG--CEPNVITYNTLINGL 176
           F  +LR    P+  ++N L+ GL  E+R  EA  L   +   G  C P+V++Y+T+ING 
Sbjct: 40  FDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G         ++M +          PN VTY++II  LCK   VDKA  +   M   
Sbjct: 99  FKEGD-------LDKMLDQR------ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            + PD +TYNS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  EA
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            ++ D M +RG++P+  TY TL+ G+   G +     L   M   G   +   ++IL+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           Y K ++VEEA+ ++ +M  +G+ P  VTY T+   L +  +VE A+  F++M  +G+  D
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
           +  Y + I  LC      +A ELF  +      L    +N +ID  CK GR+  + +LF 
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 477 SLPHGVLVPNVVT-----------YNIMIQ------GLCNDGQMDKARDLFLD----MEE 515
            +    + P+++T           Y++ +        + N G  +K   +  +       
Sbjct: 386 LMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASN 445

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++  P + T+++++HG  +         +   +    +  +A   +I++D L+K
Sbjct: 446 SSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 499



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 264/570 (46%), Gaps = 49/570 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF--------PNLYTYN 100
           +A  +FD +LR     P V S+NILL  L         L    +         P++ +Y+
Sbjct: 35  DARHVFDELLRR--GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +IN F K G +        ++L    +PN  T+NS+I  L     + +A  + T +   
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+ +TYN++++G C +G    A+   ++M +   E      P+ VTY++++D LCK 
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE------PDVVTYNSLMDYLCKN 199

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G   +A+ +F  M    + PD+ TY +L+ G        E   L   M+  G+ P+   F
Sbjct: 200 GRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 259

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           ++++    K  K++EA  +   M Q+G+ PNA TY T++D  C  G++  A   F  M  
Sbjct: 260 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 319

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G + D + YN LI+  C   + E+A  L+ EM+ +GI  + + +N++     +  +V  
Sbjct: 320 EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIE 379

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD--------- 451
           + KLFD M R GV  D  T   F+ G  +  Y +  V ++     +    D         
Sbjct: 380 SGKLFDLMVRIGVKPDIITLGRFL-GSARRDYSL-FVNIYFIFTNMSNTGDKEKETPVNT 437

Query: 452 --------------IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
                         +  YN ++ GLCK+     A  +F +L    L     T+NIMI  L
Sbjct: 438 NGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 497

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G+ D+A+DLF+    N   P+  T+ ++    I      ++++L   M++     D+
Sbjct: 498 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 557

Query: 558 SIVSIVV-DLLVKNEISLKSLPSFLVQERQ 586
            +++ +V +LL + EI+       ++ E+ 
Sbjct: 558 GMLNFIVRELLQRGEITRAGTYLSMIDEKH 587



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 167/332 (50%), Gaps = 10/332 (3%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFN 281
           + A+ +F ++    I PDV +YN L++GLC  N   EA  L   M D G    P VV+++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            +++   K   +D+       M+ + + PN  TYN+++   C    +++A E+  +M   
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D ++YN +++G+C + + +EA+   ++M S G++P VVTYN+L   L +  +   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            K+FD M + G+  D  TY T + G    G ++E   L   +       +   ++ L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             K  +++ A  +F  +    L PN VTY  +I  LC  G+++ A   F  M +    PD
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
            I ++ LIH     ++  K  EL  +M ++ +
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 10/279 (3%)

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYN 351
           ++A  + D +++RG+ P+  +YN L++G C   +   A EL   M   G  C  D VSY+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+ K  ++++       M+ + I P VVTYN++   L +   V+ A+++   M + 
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  D  TY + + G C +G   EA+   + +R    E D+  YN L+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++F S+    L P++ TY  ++QG    G + +   L   M  N   P+   F +L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + +  +  +   +  KM+++ + P+A     V+D+L K+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKS 304



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 185/449 (41%), Gaps = 71/449 (15%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTY 99
           P EA  +F   +R     P V ++N L+  L KN       K +D+ +   GL P++ TY
Sbjct: 167 PKEAI-VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS-MTKRGLKPDITTY 224

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
             L+  +   G +         ++R+   PN   F+ L+     + ++ EA  +F+K++ 
Sbjct: 225 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQ 284

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  PN +TY T+I+ LC++G    A+  FE+M +         +P+++ Y+++I  LC 
Sbjct: 285 QGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG------LRPDSIVYNSLIHSLCI 338

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR---------------- 263
               +KA+ LFL+M D  I    + +NS+I   C      E+ +                
Sbjct: 339 FDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398

Query: 264 --------------------LFIEMMDQGVQ--------------------PSVVTFNVI 283
                               +F  M + G +                    P + T+N+I
Sbjct: 399 LGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNII 458

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LCKN+  D+A R+   +    ++  A T+N ++D    +G+ + A++LF +  S G 
Sbjct: 459 LHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 518

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             +  +Y ++         +EE   L+  M   G        N +   L +  ++  A  
Sbjct: 519 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 578

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
               +     + +  T + FID L    Y
Sbjct: 579 YLSMIDEKHFSLEASTASLFIDLLSGGKY 607



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALK 403
           D  SYNIL+NG C     +EAL L   M   G    P VV+Y+T+  G F+   +     
Sbjct: 50  DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL----- 104

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
             D+M    ++ +  TY + I  LCK   + +A+E+  T+       D   YN ++ G C
Sbjct: 105 --DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            SG+ K A      +    + P+VVTYN ++  LC +G+  +AR +F  M +    PD+ 
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           T+  L+ G+       +++ LL  M    + P+  + SI+V    K E   +++  F   
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 584 ERQG 587
            +QG
Sbjct: 283 RQQG 286


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 258/502 (51%), Gaps = 15/502 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A  +FD M +  PSP  V+ F++L+    KN   +       ++   GL P+++  + +I
Sbjct: 358 ALVLFDKMEKEGPSPNSVT-FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             + K  +       F     +    N    N+++  L  + +  EA  L +K+++ G  
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PNV++YN ++ G CR  +  +A  +F  +     E G+  KPN  TYS +IDG  +    
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNIL----EKGL--KPNNYTYSILIDGCFRNHDE 529

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNV 282
             A  +   M   NI  + V Y ++I+GLC     ++A+ L   M+++  +  S +++N 
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I+D   K  +MD A    + M   G+ PN  TY +LM+G C   ++++A E+   M++ G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D  +Y  LI+G+CK   +E A +L+ E++ +G+ P+   YN+L  G   +  +  AL
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L+ +M +DG+  D  TYTT IDGL K+G +I A EL+  ++ +    D   Y  +++GL
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K G+     ++F  +    + PNV+ YN +I G   +G +D+A  L  +M +    PD 
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829

Query: 523 ITFDMLIHGFIRINEPSKVNEL 544
            TFD+L+ G +   +P +   L
Sbjct: 830 ATFDILVSGQVGNLQPVRAASL 851



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 263/548 (47%), Gaps = 48/548 (8%)

Query: 64  PPPVSSFNILLASLAKNKHYDT-RLN----ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +  +++LAS+ +    D  RL     + G+  N+     LI   CK   +    + 
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++ +   +PN+ TF+ LI+       + +A   + K++  G  P+V   +T+I G  +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL LF+E    + E G+    N    +TI+  LCK+G  D+A  L  +M+   I
Sbjct: 422 GQKHEEALKLFDE----SFETGLA---NVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VV+YN+++ G C   + + A+ +F  ++++G++P+  T+++++D   +N     A  
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF----------------------- 335
           +++ M    +  N   Y T+++G C +G+ ++A EL                        
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594

Query: 336 ---GSMESMGCKHDD----------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              G M+S    +++          ++Y  L+NG CKN  +++AL +  EM +KG+K  +
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
             Y  L  G  +   +E A  LF E+  +G+      Y + I G    G ++ A++L++ 
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       D+  Y  LIDGL K G L  A EL+  +    LVP+ + Y +++ GL   GQ
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
             K   +F +M++N   P+V+ ++ +I G  R     +   L  +M +K ++PD +   I
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI 834

Query: 563 VVDLLVKN 570
           +V   V N
Sbjct: 835 LVSGQVGN 842



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 265/567 (46%), Gaps = 57/567 (10%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD-----TRLNATGLFPNLYTYNILI 103
           EA  ++  M+ +      V++  ++ ASL + K  +     +R    G  P+   Y++ +
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAV 275

Query: 104 NCFCKIGRVSLGFIAFGRILRSCF-----TPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
              CK    +L       +LR         P+  T+ S+I     +  + +A  L  ++ 
Sbjct: 276 QACCK----TLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           + G   NV+   +LI G C+    + AL LF++M            PN+VT+S +I+   
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP------SPNSVTFSVLIEWFR 385

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G ++KA   + +M+   + P V   +++I G        EA +LF E  + G+  +V 
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 444

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
             N I+  LCK  K DEA+ LL  M  RG+ PN  +YN +M G C    ++ A  +F ++
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G K ++ +Y+ILI+G  +N + + AL +   M S  I+   V Y T+  GL ++ Q 
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564

Query: 399 EHALKL------------------------------------FDEMQRDGVAADTRTYTT 422
             A +L                                    ++EM  +G++ +  TYT+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            ++GLCKN  + +A+E+   ++    +LDI AY  LIDG CK   ++ A  LF  L    
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L P+   YN +I G  N G M  A DL+  M ++    D+ T+  LI G ++       +
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
           EL  +M+   ++PD  I +++V+ L K
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSK 771



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 246/541 (45%), Gaps = 54/541 (9%)

Query: 69  SFNILLASLAKNKHYD---------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           +FN LL + +K++  D           L+    FP +   N  ++   +   ++     +
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYV---NRTLSALVQRNSLTEAKELY 221

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
            R++      +  T   L++    E +  EA  + ++    G EP+ + Y+  +   C+T
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
               +A +L  EM         +C P+  TY+++I    K+G +D A  L  +M  + I+
Sbjct: 282 LDLAMANSLLREMKEKK-----LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
            +VV   SLI G C  ND   A  LF +M  +G  P+ VTF+V+++   KN +M++A   
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396

Query: 300 LDLMVQRGVRP----------------------------------NACTYNTLMDGFCLM 325
              M   G+ P                                  N    NT++   C  
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQ 456

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK + A EL   MES G   + VSYN ++ G+C+ K ++ A  ++  ++ KG+KP   TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           + L  G F  H  ++AL++ + M    +  +   Y T I+GLCK G   +A EL   +  
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576

Query: 446 LK--CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            K  C +   +YN +IDG  K G +  A   +  +    + PNV+TY  ++ GLC + +M
Sbjct: 577 EKRLC-VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A ++  +M+      D+  +  LI GF + +     + L  ++ E+ + P   I + +
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695

Query: 564 V 564
           +
Sbjct: 696 I 696



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 35/437 (8%)

Query: 150 AAALFTKL----KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN---------GN 196
           A+ L +KL    K+FG E N   +N L+N   +   T  A+++  +M            N
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202

Query: 197 GEIGVVCKPNTVT-----YSTI----IDG-------LCKEGFVDKAKALFLQMKDENI-- 238
             +  + + N++T     YS +    +DG       L +    ++  A  L++    I  
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262

Query: 239 --NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDE 295
              PD + Y+  +   C   D   A  L  EM ++ +  PS  T+  ++    K   MD+
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A RL D M+  G+  N     +L+ G C    +  A  LF  ME  G   + V++++LI 
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            + KN E+E+AL  Y++M   G+ P+V   +T+  G  +  + E ALKLFDE    G+ A
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-A 441

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +     T +  LCK G   EA EL   +       ++ +YN ++ G C+   +  A  +F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++    L PN  TY+I+I G   +     A ++   M  +    + + +  +I+G  ++
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561

Query: 536 NEPSKVNELLHKMKEKK 552
            + SK  ELL  M E+K
Sbjct: 562 GQTSKARELLANMIEEK 578



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 1/239 (0%)

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L  S +S G + +  ++N L+N Y K+++ + A+ +  +M+   + P     N     L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            + + +  A +L+  M   GV  D  T    +    +     EA+E+         E D 
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVL-VPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             Y+  +   CK+  L  A  L   +    L VP+  TY  +I      G MD A  L  
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +M  +  + +V+    LI G  + N+      L  KM+++   P++   S++++   KN
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 241/472 (51%), Gaps = 41/472 (8%)

Query: 149 EAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +A  LF ++   F C+ +V ++N+++N +   G     L  ++ + N N  + +   PN 
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           ++++ +I  LCK GFVD+A  +F  M ++   PD  TY +L+ GLC     +EA  L  E
Sbjct: 188 LSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  +G  PS V +NV++D LCK   +   ++L+D M  +G  PN  TYNTL+ G CL GK
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGK 307

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNK-------------------------- 361
           +++A  L   M S  C  +DV+Y  LING  K +                          
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSV 367

Query: 362 ---------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
                    + EEA++L+++M  KG +P +V Y+ +  GL    +   A ++ + M   G
Sbjct: 368 LISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSG 427

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +  TY++ + G  K G   EA++++R +    C  +   Y+ LIDGLC  GR+K A 
Sbjct: 428 CLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAM 487

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM---EENAAAPDVITFDMLI 529
            ++  +    + P+ V Y+ MI+GLC  G MD A  L+ +M   EE  + PDV+T+++L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            G     + S+  +LL+ M ++   PD    +  ++ L +   S +   SFL
Sbjct: 548 DGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFL 599



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 258/536 (48%), Gaps = 45/536 (8%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNAT---GLFPNL 96
           P +A  +F  M+        V SFN +L  +          + YD  +N+     + PN 
Sbjct: 128 PEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            ++N++I   CK+G V      F  +      P+  T+ +L+ GL  E RI EA  L  +
Sbjct: 188 LSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +++ GC P+ + YN LI+GLC+ G       L + M          C PN VTY+T+I G
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKG------CFPNEVTYNTLIHG 301

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LC +G +DKA +L  +M      P+ VTY +LI+GL       +  RL I M ++G + +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
              ++V++  L K  K +EA  L   M ++G RPN   Y+ ++DG C  GK N A+E+  
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M S GC  +  +Y+ L+ G+ K    EEA+ ++REM   G       Y+ L  GL  + 
Sbjct: 422 GMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVG 481

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL---KCELDIQ 453
           +V+ A+ ++ +M   G+  DT  Y++ I GLC  G +  A++L+  +      K + D+ 
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541

Query: 454 AYNCLIDGLCKSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGL------CNDG----- 501
            YN L+DGLC    +  A +L  C L  G   P+V+T N  +  L      C +G     
Sbjct: 542 TYNILLDGLCMQKDVSRAVDLLNCMLDRGC-DPDVITCNTFLNTLSEKSDSCEEGRSFLE 600

Query: 502 ----------QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
                     ++  A  +   M     AP   T+ M++     I +P K+N  ++K
Sbjct: 601 ELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVP---EICKPKKINAAINK 653



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 185/389 (47%), Gaps = 15/389 (3%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI-----HGLCHANDWNEAKR 263
           T S++I+     G     + L  +++ EN    V+   S I     +G  H  +  +A  
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPE--KAVD 133

Query: 264 LFIEMMDQ-GVQPSVVTFN----VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           LF  M+D+   + SV +FN    VI++E   +R ++    +++  +   + PN  ++N +
Sbjct: 134 LFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C +G ++RA E+F  M    C  D  +Y  L++G CK + ++EA+ L  EM S+G 
Sbjct: 194 IKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P+ V YN L  GL +   +    KL D M   G   +  TY T I GLC  G + +AV 
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVS 313

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   +   KC  +   Y  LI+GL K  R      L  S+       N   Y+++I GL 
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLF 373

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            +G+ ++A  L+  M E    P+++ +  +I G  R  +P++  E+L+ M     +P+  
Sbjct: 374 KEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVY 433

Query: 559 IVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             S ++    K  +S +++  +   +  G
Sbjct: 434 TYSSLMKGFFKTGLSEEAIQVWREMDETG 462


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 251/501 (50%), Gaps = 12/501 (2%)

Query: 61  HPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H   P + ++NIL      L  ++       R+   GL P+L TY ILI   C++G +  
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            F    ++L      +  T+  L+  L    RI EA  L  +++  G +P+++TY+ LI+
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIH 453

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GLC+ G    A+ L+EEM +          PN+   S II GL ++G + +A+  F  + 
Sbjct: 454 GLCKRGAVEEAIELYEEMCSKR------IYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
             ++  +++ YN +I G     +  EA R + +++++G+ P++VTFN ++   CK  K+ 
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA +LLD +   G+ P + TY TLM+G+C  G ++   ++   ME+   K   ++Y +++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G CK   + E++ L + M ++G+ P  +TYNT+     + H ++ A +L ++M +  + 
Sbjct: 628 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 687

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
               TY   I+GLC  G + +A  L  TL+     L   AY  +I   C  G ++ A   
Sbjct: 688 PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVF 747

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +       ++  Y+ +I  LC    +  A+  F  M  +   PD     ++++ F R
Sbjct: 748 FHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHR 807

Query: 535 INEPSKVNELLHKMKEKKVMP 555
             +P+ V E+   M +  ++P
Sbjct: 808 SGDPNSVFEIFAMMIKCGLLP 828



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 257/528 (48%), Gaps = 50/528 (9%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           ++++N LL +L   +H D        + A+G+  N YT  ILI+  C+  R+        
Sbjct: 203 IATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR 259

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
                 F P+  +FN+L+ G      +  A + F  +  +G  P+V +YN L++GLC  G
Sbjct: 260 ETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAG 319

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               AL    +M N   E      P+ VTY+ + +G    G +  A  +  +M    +NP
Sbjct: 320 SMEEALEFTNDMENHGVE------PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNP 373

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D+VTY  LI G C   +  E+ +L  +M+ QG++ S+VT+ V++  LCK+ ++DEA  LL
Sbjct: 374 DLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILL 433

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF------------------------- 335
             M   G++P+  TY+ L+ G C  G +  A EL+                         
Sbjct: 434 HEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEK 493

Query: 336 GSMESMGCKHDDVS----------YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G++       D V+          YNI+I+GY K   + EA+  Y++++ KGI PT+VT+
Sbjct: 494 GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTF 553

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N+L  G  +  ++  A+KL D ++  G+   + TYTT ++G C+ G +    ++   +  
Sbjct: 554 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEA 613

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              +     Y  ++ GLCK GRL  + +L   +    L P+ +TYN +IQ  C    + K
Sbjct: 614 KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQK 673

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           A  L   M +++  P  +T+++LI+G          + LL  ++++ +
Sbjct: 674 AFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 721



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 245/507 (48%), Gaps = 12/507 (2%)

Query: 65  PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+NILL       S+ +   +   +   G+ P++ TYNIL N F  +G +S  +  
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKV 362

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+L +   P+  T+  LI G      I E+  L  K+ + G + +++TY  L++ LC+
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    A+ L  EM      IG+  KP+ +TYS +I GLCK G V++A  L+ +M  + I
Sbjct: 423 SGRIDEAVILLHEME----VIGL--KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRI 476

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+    +++I GL      +EA+  F  +    V   ++ +N+++D   K   + EA R
Sbjct: 477 YPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVR 536

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               ++++G+ P   T+N+L+ GFC  GK+  A +L  +++  G     V+Y  L+NGYC
Sbjct: 537 SYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 596

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  ++     +  EM +K IKPT +TY  +  GL +  ++  +++L   M   G+  D  
Sbjct: 597 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 656

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I   CK   + +A +L   +     +     YN LI+GLC  G LK A  L  +L
Sbjct: 657 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 716

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +    V Y  +I+  C  G +  A   F  M E      +  +  +I+   + N  
Sbjct: 717 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 776

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD 565
           +        M    + PD  I  ++++
Sbjct: 777 TDAKFFFCMMLTHGIPPDQDICLVMLN 803



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 214/412 (51%), Gaps = 11/412 (2%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKP 205
           + +A  +  K+K    + ++ TYN+L+  L    HT I  +++ E+ A+G          
Sbjct: 184 VHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASG-------VPQ 233

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  T   +IDGLC++  +  A     +   E   P VV++N+L+ G C     + AK  F
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+  G+ P V ++N+++  LC    M+EA    + M   GV P+  TYN L +GF ++
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G I+ A ++   M   G   D V+Y ILI G+C+   +EE+  L  +M+S+G+K ++VTY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L   L +  +++ A+ L  EM+  G+  D  TY+  I GLCK G + EA+EL+  +  
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCS 473

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            +   +    + +I GL + G +  A   F S+    +   ++ YNIMI G    G + +
Sbjct: 474 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 533

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           A   +  + E   +P ++TF+ LI+GF +  + ++  +LL  +K   ++P +
Sbjct: 534 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 240/553 (43%), Gaps = 69/553 (12%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +LR   +  P++S      S++  K +D   +A+   PN     ILI      G  S G 
Sbjct: 11  LLRKSLNLSPITSLGFTKHSVSAAKLHDESADAS--IPNDAVRQILI------GLRSFGA 62

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIM---------EAAALFTKLK-AFGCEPNV 166
             F  +    F   A+  N+     H   +I+          A  LF  L+  +G   + 
Sbjct: 63  SKF--LWGHHFQTLASVLNT-----HQVDQILLSLRVDNSDSALFLFDLLRNEYGFRHSR 115

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMAN--GNGEIGVVCKP----------NTVTYSTII 214
           +++  + + + R G +     +  +M    G+G    +C+           N V +  + 
Sbjct: 116 VSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLA 175

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH------------------------ 250
               +   V  A  +  +MK  N+   + TYNSL++                        
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNE 235

Query: 251 --------GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
                   GLC  +   +A     E   +   PSVV+FN +M   CK   +D A     +
Sbjct: 236 YTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCM 295

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M++ G+ P+  +YN L+ G C+ G +  A E    ME+ G + D V+YNIL NG+     
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  A  + + M+  G+ P +VTY  L  G  ++  +E + KL ++M   G+     TYT 
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            +  LCK+G I EAV L   + ++  + D+  Y+ LI GLCK G ++ A EL+  +    
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + PN    + +I GL   G + +A+  F  + ++  A ++I ++++I G+ ++    +  
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 543 ELLHKMKEKKVMP 555
               ++ EK + P
Sbjct: 536 RSYKQIIEKGISP 548



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 178/405 (43%), Gaps = 58/405 (14%)

Query: 224 DKAKALFLQMKDE-NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---GVQPSVVT 279
           D A  LF  +++E       V++  + H +       E +R+  +M+++   G  PS+  
Sbjct: 96  DSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCE 155

Query: 280 F-----------NVIMDELC----KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
                       NV+ D L     +   + +A  +L  M    ++ +  TYN+L+     
Sbjct: 156 LLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYN--- 212

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +   +   +++  +++ G   ++ +  ILI+G C+   +++A++  RE   +   P+VV+
Sbjct: 213 LRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVS 272

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +N L  G  ++  V+ A   F  M + G+  D  +Y   + GLC  G + EA+E    + 
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDME 332

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG-------- 496
               E DI  YN L +G    G +  AW++   +    L P++VTY I+I G        
Sbjct: 333 NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIE 392

Query: 497 ---------------------------LCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
                                      LC  G++D+A  L  +ME     PD++T+ +LI
Sbjct: 393 ESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLI 452

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVS-IVVDLLVKNEIS 573
           HG  +     +  EL  +M  K++ P++ + S I+  L  K  IS
Sbjct: 453 HGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS 497


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/390 (34%), Positives = 204/390 (52%), Gaps = 47/390 (12%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           PP+  F  +L  L K KHY T      ++   G+ PNL T NILINCFC +G+++  F  
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G+IL+  + P+  T N+L+KGL  +  +  +     K+ A G + N ++Y TL+NGLC+
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD--- 235
            G T  A+ L   + + +       +P+ V YSTIIDGLCK+  V++A   F +M     
Sbjct: 183 IGETRCAVKLLRMIEDRS------TRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGI 236

Query: 236 --------------------------------ENINPDVVTYNSLIHGLCHANDWNEAKR 263
                                           +NINP+V TYN LI  LC      EAK+
Sbjct: 237 FPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKK 296

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  EM  +G    VVT+N ++D LCK++ +D+A+ L   M + G++PN  TY  L+DG C
Sbjct: 297 LLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLC 356

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G++  A++LF  +   GC  D  +YN++I+G CK    ++AL++  +M   G  P  V
Sbjct: 357 KGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAV 416

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           T++ +   LFE  + + A KL   M   G+
Sbjct: 417 TFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 211/395 (53%), Gaps = 6/395 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+L    TP    F  ++  L        A +L  +++  G EPN++T N LIN  C 
Sbjct: 53  FNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCH 112

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    + ++  ++     ++G   +P+T+T +T++ GLC +G V ++     ++  +  
Sbjct: 113 LGQMAFSFSVLGKIL----KLGY--QPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             + V+Y +L++GLC   +   A +L   + D+  +P VV ++ I+D LCK++ +++A  
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYD 226

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M  RG+ PN  TY+TL+ GFCL G++  A  L   M       +  +YNILI+  C
Sbjct: 227 FFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC 286

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V+EA  L  EM  KG    VVTYN++  GL +   ++ A  LF +M++ G+  +  
Sbjct: 287 KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKY 346

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  IDGLCK G +  A +LF+ L +  C +D++ YN +I GLCK G    A  +   +
Sbjct: 347 TYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKM 406

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
                +PN VT++I+I+ L    + DKA  L   M
Sbjct: 407 EDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 213/411 (51%), Gaps = 6/411 (1%)

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E+ + +  + F +L      P +I +  ++  L +  H   A++L  +M     E     
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIE----- 97

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PN VT + +I+  C  G +  + ++  ++      PD +T N+L+ GLC   +   +  
Sbjct: 98  -PNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLH 156

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
              +++ QG Q + V++  +++ LCK  +   A +LL ++  R  RP+   Y+T++DG C
Sbjct: 157 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLC 216

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
               +N+A + F  M + G   + ++Y+ LI G+C   ++  A SL  EM+ K I P V 
Sbjct: 217 KDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVY 276

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN L   L +  +V+ A KL  EM   G  AD  TY + +DGLCK+  + +A  LF  +
Sbjct: 277 TYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKM 336

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +    + +   Y  LIDGLCK GRLK A +LF  L       +V TYN+MI GLC +G  
Sbjct: 337 KKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMF 396

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           DKA  +   ME+N   P+ +TFD++I      +E  K  +LLH M  K ++
Sbjct: 397 DKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 176/358 (49%)

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           E  VD   + F ++      P ++ +  ++  L     +  A  L  +M  +G++P++VT
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
            N++++  C   +M  +  +L  +++ G +P+  T NTLM G CL G++ R+      + 
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           + G + + VSY  L+NG CK  E   A+ L R +  +  +P VV Y+T+  GL +   V 
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A   F EM   G+  +  TY+T I G C  G ++ A  L   + +     ++  YN LI
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           D LCK G++K A +L   + H     +VVTYN ++ GLC    +DKA  LF+ M++    
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQ 342

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           P+  T+  LI G  +        +L   +  K    D    ++++  L K  +  K+L
Sbjct: 343 PNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKAL 400



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 1/294 (0%)

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D  S+   L++ R   P    +  ++     M     A  L   ME  G + + V+ NIL
Sbjct: 48  DTVSQFNRLLLVRHTPP-IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           IN +C   ++  + S+  +++  G +P  +T NTL  GL    +V+ +L   D++   G 
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  +Y T ++GLCK G    AV+L R +       D+  Y+ +IDGLCK   +  A++
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYD 226

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            F  +    + PNV+TY+ +I G C  GQ+  A  L  +M      P+V T+++LI    
Sbjct: 227 FFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALC 286

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +  +  +  +LL +M  K    D    + V+D L K++   K+   F+  ++ G
Sbjct: 287 KEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 236/446 (52%), Gaps = 15/446 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN  TF+ LI GL    R+ EA   + ++    C PN+   N L+  LC+ G    A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNS 247
           F          G+ C P+ +T + +I+G C+   +DKA  LF +M K+  + P+  TY +
Sbjct: 61  FR---------GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQR 306
           +I   C  +  ++A++L  E         V+    +    CK +++DEA +LL D++ ++
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
             +P+   +N ++ GFC  G++  A E+  ++ SMGC  + V+Y  LI+G+CK+  + EA
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 367 LSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           L L++ + S+    +P VVT+N L  GL +  ++EHA +L  +M+   + ADT TYTT +
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           DGLCK G   E   +F  +    C   +  Y  L+   CK+G L+ A ++  S+    + 
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP 349

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P+V TY ++++GL  +G++  A + F  +      P  + +  L+ G  +     +  + 
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKY 409

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKN 570
             +M ++++ PD +   ++V++L K 
Sbjct: 410 YVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 226/440 (51%), Gaps = 13/440 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN +T+++LI   CK GR+      + ++L     PN    N L+  L     + +A A+
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F   +   C P+VIT N LING C       AL LF EM      +     P   TY+ I
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALV-----PEATTYTAI 112

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-G 272
           I   CK   +D+A+ L  +      + DV+   S+  G C A   +EA +L ++M+++  
Sbjct: 113 IKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKS 170

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P +V +NVI+   CK  ++ EA  +L+ +V  G  PNA TY TL+DGFC  G ++ A 
Sbjct: 171 AKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEAL 230

Query: 333 ELFGSMESMG--CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           +LF  + S     + + V++N LI+G CK   +E A  L ++M ++ ++    TY TL  
Sbjct: 231 QLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMD 290

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +     ++F+EM R+G      TYTT +   CK G + +A ++ R++       
Sbjct: 291 GLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPP 350

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  Y  L++GL ++G+++ A E F  +      P  V Y+ +++G C    +D+A   +
Sbjct: 351 DVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYY 410

Query: 511 LDMEENAAAPDVITFDMLIH 530
           ++M +   APD  T  +L+ 
Sbjct: 411 VEMLDRRLAPDPATCKLLVE 430



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 207/429 (48%), Gaps = 20/429 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNI 101
            EA   ++ ML  H   P +   N+LLASL +    D    A  +F      P++ T NI
Sbjct: 20  GEAVECYNQMLERH-CVPNLRDINLLLASLCQAGTMD---QAMAIFRGIQCSPSVITLNI 75

Query: 102 LINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           LIN FC++  +      F  + ++    P A T+ ++IK      R+ +A  L  +  + 
Sbjct: 76  LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SS 133

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            C  +VI   ++  G C+      A  L  +M           KP+ V ++ II G CK 
Sbjct: 134 CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKA 188

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF--IEMMDQGVQPSVV 278
           G V +A  +   +      P+ VTY +LI G C + + +EA +LF  +   D   +P+VV
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TFN ++  LCK  +++ A  L+  M  R +R +  TY TLMDG C  G+ +    +F  M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              GC    V+Y  L++ +CK   +++A  + R MV+KGI P V TY  L  GLFE  +V
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A + F+++ R+        Y+  + G CK   + EAV+ +  +   +   D      L
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLL 428

Query: 459 IDGLCKSGR 467
           ++ LCK GR
Sbjct: 429 VEMLCKRGR 437



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 116/248 (46%), Gaps = 7/248 (2%)

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           ++++LI G CK   + EA+  Y +M+ +   P +   N L   L +   ++ A+ +F  +
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI 64

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGR 467
           Q    +    T    I+G C+   + +A+ELF  + +      +   Y  +I   CK  R
Sbjct: 65  Q---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFD 526
           L  A +L           +V+    + +G C   ++D+A  L LDM E+ +A PD++ ++
Sbjct: 122 LDQARQLL--EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWN 179

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           ++IHGF +     +  E+L  +     +P+A   + ++D   K+    ++L  F V   +
Sbjct: 180 VIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 587 GEVGESNV 594
               E NV
Sbjct: 240 DHHAEPNV 247


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 236/508 (46%), Gaps = 8/508 (1%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFP--NLYTYNILINCFCKIGRVSLGFIAFGRI 122
           PP+   N LL +LA++       +     P  NL+TY  LIN +C  G +         +
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSL 100

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           LR+   P++  + S + G         A  LF  +   GC     TY  L+ GLC  G  
Sbjct: 101 LRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMV 160

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+ +F  M          C P++  YS ++ GLC  G   +A AL      +   P+V
Sbjct: 161 REAMAVFAGMWPDG------CAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNV 214

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             YN+LI G C   D   A  +F  M  +G  P+V T+  ++   CK+ K++ A  L   
Sbjct: 215 AVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSR 274

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M++ G+ PN  TY TL+ G C  G +  A  L  SME+ G   ++ +  +LI+  CK+  
Sbjct: 275 MIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGR 334

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +EEA      +V KGIK   V Y ++   L +  + + A  L  ++  +G   D   Y++
Sbjct: 335 IEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSS 394

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDGLC+   ++EA+ L   +     + +   +  LID   +  R      +   +    
Sbjct: 395 LIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAG 454

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+VVTY + I+  C DG+M+ A  + + M ++   P++ T++ LI G+  +   S+  
Sbjct: 455 VKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAF 514

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             L  M +    P+    ++++ LL+K 
Sbjct: 515 SSLKNMIDNGCKPNDESYTVLLGLLLKK 542



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 224/492 (45%), Gaps = 24/492 (4%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G  PN+ TY  LI  FCK G+V    + + R++ +   PN  T+ +LI+G  +E  
Sbjct: 240 MQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGH 299

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A  L   ++A G  PN  T   LI+ LC+ G    A      +     + G+  K N
Sbjct: 300 LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV----QKGI--KVN 353

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+++ID LCK G  D A  L  ++  E   PD   Y+SLI GLC  N   EA  L  
Sbjct: 354 QVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLN 413

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M++ GVQ + V F +++D+  +  + D    + D M   GV+P+  TY   +  +C  G
Sbjct: 414 DMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDG 473

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           ++  AE +   M   G + +  +YN LI GY     V +A S  + M+  G KP   +Y 
Sbjct: 474 RMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESY- 532

Query: 387 TLFLGLFEIHQVEHAL-----------------KLFDEMQRDGVAADTRTYTTFIDGLCK 429
           T+ LGL       H L                 +L +E+ +   ++ +  Y  FI  L K
Sbjct: 533 TVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSK 592

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
              + EA      ++          Y C+I+   +   LK A     S+     +P + +
Sbjct: 593 VDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLES 652

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y  +I  LC +G    A+ +F D+       D I + +LI G ++    +  + LL  M+
Sbjct: 653 YRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFME 712

Query: 550 EKKVMPDASIVS 561
           E+   P ++I S
Sbjct: 713 EQNCRPGSAIYS 724



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 180/423 (42%), Gaps = 46/423 (10%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P     +T++  L + G +   ++L  +M   N++    TY +LI+  CHA D   AKR 
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRH 96

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              ++  G+ P    +   +   C+      A RL  LM QRG      TY  L+ G C 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 325 MGKINRAEELFGSMESMGCKHDD-----------------------------------VS 349
            G +  A  +F  M   GC  D                                      
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN LI+GYC   ++E A+ +++ M SKG  P V TY  L  G  +  +VE A+ L+  M 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--LIDGLCKSGR 467
             G+A +  TYTT I G C  G++  A  L  ++    C L    + C  LID LCK GR
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME--ACGLAPNEWTCLVLIDALCKHGR 334

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A +   SL    +  N V Y  MI  LC  G+ D A +L   +      PD   +  
Sbjct: 335 IEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSS 394

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LI G  R N+  +   LL+ M E  V  +A   +I++D   K+    +S    ++ +R  
Sbjct: 395 LIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID---KHLREFRSDSPKMISDRMA 451

Query: 588 EVG 590
             G
Sbjct: 452 AAG 454



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 165/424 (38%), Gaps = 63/424 (14%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+       H +        + A GL PN +T  +LI+  CK GR+      
Sbjct: 282 PNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQF 341

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            G +++     N   + S+I  L    +   A  L  K+   G  P+   Y++LI+GLCR
Sbjct: 342 LGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCR 401

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               + A++L  +M     E GV  + N V ++ +ID   +E   D  K +  +M    +
Sbjct: 402 ENKLLEAISLLNDMI----ESGV--QANAVPFTILIDKHLREFRSDSPKMISDRMAAAGV 455

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVVTY   I   C      +A+ + I+M+D GV+P++ T+N ++        + +A  
Sbjct: 456 KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFS 515

Query: 299 LLDLMVQRGVRPNACTYNTLM--------------DGFCLMGKINRA--EELFGSMESMG 342
            L  M+  G +PN  +Y  L+              D   L   ++    EEL   +  + 
Sbjct: 516 SLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQ 575

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C      Y+  I    K   +EEA S    M S  + P+   Y  +    + +  ++ AL
Sbjct: 576 CSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEAL 635

Query: 403 KLFDEMQRDGVAADTRTY-----------------------------------TTFIDGL 427
           +  D M +        +Y                                      IDGL
Sbjct: 636 RFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGL 695

Query: 428 CKNG 431
            + G
Sbjct: 696 LQKG 699



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/384 (21%), Positives = 145/384 (37%), Gaps = 92/384 (23%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+  N   Y  +I+  CK G+         +I+   F P+A  ++SLI GL  E++++EA
Sbjct: 349 GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEA 408

Query: 151 AAL---------------FT--------------------KLKAFGCEPNVITYNTLING 175
            +L               FT                    ++ A G +P+V+TY   I  
Sbjct: 409 ISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRS 468

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C+ G    A ++  +M +     GV  +PN  TY+T+I G    G V +A +    M D
Sbjct: 469 YCQDGRMEDAESMMIQMIDH----GV--RPNLTTYNTLIKGYANLGLVSQAFSSLKNMID 522

Query: 236 ENINPDVVTYNSLIHGLCHANDWN------------------------------------ 259
               P+  +Y  L+  L   N ++                                    
Sbjct: 523 NGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYV 582

Query: 260 ---------------EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
                          EAK   + M    + PS   +  +++   + + + EA R LD MV
Sbjct: 583 YDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMV 642

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +R   P   +Y  ++   C  G  + A+ +FG + S     D++++ ILI+G  +     
Sbjct: 643 KRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTA 702

Query: 365 EALSLYREMVSKGIKPTVVTYNTL 388
           +   L   M  +  +P    Y+ L
Sbjct: 703 DCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 14/297 (4%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K    R+ A G+ P++ TY + I  +C+ GR+        +++     PN  T+N+LIKG
Sbjct: 444 KMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG 503

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR--TGHTMIA----------LNL 188
                 + +A +    +   GC+PN  +Y  L+  L +  + H ++A          + +
Sbjct: 504 YANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKV 563

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            EE+      I + C   +  Y   I  L K   +++AK+  + M+  N+ P    Y  +
Sbjct: 564 LEELLEE--VIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCM 621

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I          EA R    M+ +   P + ++  I+  LC+      A  +   ++ +  
Sbjct: 622 IECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEY 681

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
             +   +  L+DG    G       L   ME   C+     Y+ L        E +E
Sbjct: 682 NRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQE 738


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 261/532 (49%), Gaps = 18/532 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EAF     +LR       + + N L+ SL +    +        ++ +G+  N+YT NI
Sbjct: 185 HEAFT----LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           ++N  CK G++        ++      P+  T+N+LI    ++  + EA  L   +   G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P V TYNT+INGLC+ G    A  +F EM            P++ TY +++   CK+G
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDSTTYRSLLMEACKKG 354

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V + + +F  M+  ++ PD+V ++S++     + + ++A   F  + + G+ P  V + 
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++   C+   +  A  L + M+Q+G   +  TYNT++ G C    +  A++LF  M   
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               D  +  ILI+G+CK   ++ A+ L+++M  K I+  VVTYNTL  G  ++  ++ A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +++ +M    +     +Y+  ++ LC  G++ EA  ++  +     +  +   N +I G
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA-- 519
            C+SG           +     VP+ ++YN +I G   +  M KA  L   MEE      
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           PDV T++ ++HGF R N+  +   +L KM E+ V PD S  + +++  V  +
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 246/492 (50%), Gaps = 8/492 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++LI  + +  ++     AF  +    FT +    N+LI  L     +  A  ++ ++ 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G   NV T N ++N LC+ G  M  +  F       G       P+ VTY+T+I    
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGK-MEKVGTFLSQVQEKG-----VYPDIVTYNTLISAYS 281

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            +G +++A  L   M  +  +P V TYN++I+GLC    +  AK +F EM+  G+ P   
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+  ++ E CK   + E  ++   M  R V P+   ++++M  F   G +++A   F S+
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +  G   D+V Y ILI GYC+   +  A++L  EM+ +G    VVTYNT+  GL +   +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A KLF+EM    +  D+ T T  IDG CK G +  A+ELF+ ++  +  LD+  YN L
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           +DG  K G +  A E++  +    ++P  ++Y+I++  LC+ G + +A  ++ +M     
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            P V+  + +I G+ R    S     L KM  +  +PD    + ++   V+ E   K+  
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 579 SFLVQERQGEVG 590
             LV++ + E G
Sbjct: 642 --LVKKMEEEQG 651



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 245/498 (49%), Gaps = 14/498 (2%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V + NI++ +L K+   +      +++   G++P++ TYN LI+ +   G +   F    
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +    F+P   T+N++I GL    +   A  +F ++   G  P+  TY +L+   C+ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
             +    +F +M + +    VV  P+ V +S+++    + G +DKA   F  +K+  + P
Sbjct: 355 DVVETEKVFSDMRSRD----VV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D V Y  LI G C     + A  L  EM+ QG    VVT+N I+  LCK + + EA +L 
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M +R + P++ T   L+DG C +G +  A ELF  M+    + D V+YN L++G+ K 
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++ A  ++ +MVSK I PT ++Y+ L   L     +  A +++DEM    +       
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-- 478
            + I G C++G   +       +       D  +YN LI G  +   +  A+ L   +  
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
             G LVP+V TYN ++ G C   QM +A  +   M E    PD  T+  +I+GF+  +  
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708

Query: 539 SKVNELLHKMKEKKVMPD 556
           ++   +  +M ++   PD
Sbjct: 709 TEAFRIHDEMLQRGFSPD 726



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 184/369 (49%), Gaps = 14/369 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGR 111
           +R     P +  F+ +++   ++ + D  L         GL P+   Y ILI  +C+ G 
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +S+       +L+     +  T+N+++ GL     + EA  LF ++      P+  T   
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI+G C+ G+   A+ LF++M      + V      VTY+T++DG  K G +D AK ++ 
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDV------VTYNTLLDGFGKVGDIDTAKEIWA 539

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M  + I P  ++Y+ L++ LC      EA R++ EM+ + ++P+V+  N ++   C++ 
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM--GCKHDDVS 349
              +    L+ M+  G  P+  +YNTL+ GF     +++A  L   ME    G   D  +
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YN +++G+C+  +++EA  + R+M+ +G+ P   TY  +  G      +  A ++ DEM 
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719

Query: 410 RDGVAADTR 418
           + G + D +
Sbjct: 720 QRGFSPDDK 728



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 182/401 (45%), Gaps = 37/401 (9%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE-A 261
           C  N   +  +I    +   + +A   F  ++ +     +   N+LI  L     W E A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG-WVELA 219

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             ++ E+   GV  +V T N++++ LCK+ KM++    L  + ++GV P+  TYNTL+  
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +   G +  A EL  +M   G      +YN +ING CK+ + E A  ++ EM+  G+ P 
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339

Query: 382 VVTYNTLFL------GLFEIHQV-----------------------------EHALKLFD 406
             TY +L +       + E  +V                             + AL  F+
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            ++  G+  D   YT  I G C+ G I  A+ L   +    C +D+  YN ++ GLCK  
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            L  A +LF  +    L P+  T  I+I G C  G +  A +LF  M+E     DV+T++
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            L+ GF ++ +     E+   M  K+++P     SI+V+ L
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 227/445 (51%), Gaps = 8/445 (1%)

Query: 89   ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
              G  P++  YN+LI+ +C+ G +  G +  G +    F P   T+ SLI  L  +  + 
Sbjct: 1175 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLE 1234

Query: 149  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
            +  +LF +++  G  PNV  YN++I+ LC+      A+ + ++M A+G       C P+ 
Sbjct: 1235 KIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASG-------CDPDI 1287

Query: 208  VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +T++T+I GLC EG V KA+    +     +NP+ ++Y  LIHG C   +   A  L +E
Sbjct: 1288 ITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVE 1347

Query: 268  MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
            MM +G  P VVTF  ++  L    K+ EA  + + M +R V P+   YN L+ G C    
Sbjct: 1348 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1407

Query: 328  INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            +  A+ +   M     + D+  Y  LI+G+ +++ + +A  ++  M  KGI P +V+ N 
Sbjct: 1408 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNA 1467

Query: 388  LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
            +  G  +   +  A+     M++ G   D  TYTT I G  K G +  A+     +   K
Sbjct: 1468 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1527

Query: 448  CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            C+ ++  Y+ LI+G CK+G   FA  LF ++    L PNVVTY I+I  L    ++ +A 
Sbjct: 1528 CKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1587

Query: 508  DLFLDMEENAAAPDVITFDMLIHGF 532
              F  M  N  +P+ +T   L++G 
Sbjct: 1588 LYFETMLLNHCSPNDVTLHYLVNGL 1612



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 211/440 (47%), Gaps = 6/440 (1%)

Query: 137  LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
            L++GL  E R+ E   L       GC P+V+ YN LI+G CR G     L L  EM    
Sbjct: 1153 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKG 1212

Query: 197  GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                    P  VTY ++I+ L K+G ++K  +LFL+M+    +P+V  YNS+I  LC   
Sbjct: 1213 ------FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCR 1266

Query: 257  DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
               +A  +  +M   G  P ++TFN ++  LC    + +A   L   ++R + PN  +Y 
Sbjct: 1267 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1326

Query: 317  TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
             L+ GFC+ G++  A +L   M   G   D V++  LI+G     +V EAL +  +M  +
Sbjct: 1327 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1386

Query: 377  GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
             + P V  YN L  GL +   +  A  + +EM    V  D   Y T IDG  ++  + +A
Sbjct: 1387 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1446

Query: 437  VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
             ++F  +       DI + N +I G C+ G +  A     ++     +P+  TY  +I G
Sbjct: 1447 RKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1506

Query: 497  LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
                G ++ A     DM +    P+V+T+  LI+G+ +  +      L   M+ + + P+
Sbjct: 1507 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPN 1566

Query: 557  ASIVSIVVDLLVKNEISLKS 576
                +I++  L K +  L++
Sbjct: 1567 VVTYTILIGSLFKKDKVLRA 1586



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 224/501 (44%), Gaps = 56/501 (11%)

Query: 87   LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
            +   G  P L TY  LIN   K G +      F  + +  F+PN   +NS+I  L     
Sbjct: 1208 METKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRS 1267

Query: 147  IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              +A  +  ++ A GC+P++IT+NTLI GLC  GH   A +   E       I     PN
Sbjct: 1268 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE------AIRRELNPN 1321

Query: 207  TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             ++Y+ +I G C  G +  A  L ++M      PDVVT+ +LIHGL  A   +EA  +  
Sbjct: 1322 QLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE 1381

Query: 267  EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF---- 322
            +M ++ V P V  +NV++  LCK R +  A  +L+ M+++ V+P+   Y TL+DGF    
Sbjct: 1382 KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 1441

Query: 323  -------------------------------CLMGKINRAEELFGSMESMGCKHDDVSYN 351
                                           C  G ++ A     +M  +GC  D+ +Y 
Sbjct: 1442 NLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYT 1501

Query: 352  ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
             +I+GY K   +  AL    +M+ +  KP VVTY++L  G  +    + A  LF  MQ +
Sbjct: 1502 TVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAE 1561

Query: 412  GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL--------- 462
             ++ +  TYT  I  L K   ++ A   F T+ +  C  +    + L++GL         
Sbjct: 1562 ALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVIN 1621

Query: 463  ---CKSGRLKFAWEL---FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
               C +  +     L   F  L   +  P    YN +I  LC    + +A D    M + 
Sbjct: 1622 SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKK 1681

Query: 517  AAAPDVITFDMLIHGFIRINE 537
               P+ ITF  L++GF  + +
Sbjct: 1682 GYVPNPITFLSLLYGFCSVGK 1702



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 203/439 (46%), Gaps = 10/439 (2%)

Query: 129  PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT--LINGLCRTGHTMIAL 186
            P     N L+K L  + R  +A  L+ ++   G +     Y+T  L+ GLC        L
Sbjct: 1110 PEVTHCNRLLKLLVEQRRWDDARKLYDEM--LGKDSGADNYSTCVLVRGLCLERRVEEGL 1167

Query: 187  NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
             L E         G  C P+ V Y+ +IDG C+ G + +   L  +M+ +   P +VTY 
Sbjct: 1168 KLIE------ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYG 1221

Query: 247  SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            SLI+ L    D  +   LF+EM  +G  P+V  +N ++D LCK R   +A  +L  M   
Sbjct: 1222 SLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFAS 1281

Query: 307  GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            G  P+  T+NTL+ G C  G + +AE             + +SY  LI+G+C   E+  A
Sbjct: 1282 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVA 1341

Query: 367  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
              L  EM+ +G  P VVT+  L  GL    +V  AL + ++M    V  D   Y   I G
Sbjct: 1342 SDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 1401

Query: 427  LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            LCK   +  A  +   +     + D   Y  LIDG  +S  L  A ++F  + H  + P+
Sbjct: 1402 LCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPD 1461

Query: 487  VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            +V+ N MI+G C  G M +A     +M +    PD  T+  +I G+ +    +     L 
Sbjct: 1462 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 1521

Query: 547  KMKEKKVMPDASIVSIVVD 565
             M ++K  P+    S +++
Sbjct: 1522 DMIKRKCKPNVVTYSSLIN 1540



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 5/336 (1%)

Query: 240  PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASR 298
            P      +L+     A    +A ++   + +Q G  P V   N ++  L + R+ D+A +
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 1133

Query: 299  LLDLMVQRGVRPNACTYNT--LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            L D M+  G    A  Y+T  L+ G CL  ++    +L  +    GC    V YN+LI+G
Sbjct: 1134 LYDEML--GKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDG 1191

Query: 357  YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            YC+  ++   L L  EM +KG  PT+VTY +L   L +   +E    LF EM++ G + +
Sbjct: 1192 YCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPN 1251

Query: 417  TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             + Y + ID LCK     +A+ + + +    C+ DI  +N LI GLC  G ++ A     
Sbjct: 1252 VQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR 1311

Query: 477  SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
                  L PN ++Y  +I G C  G++  A DL ++M      PDV+TF  LIHG +   
Sbjct: 1312 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAG 1371

Query: 537  EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            + S+   +  KM E++V PD +I ++++  L K  +
Sbjct: 1372 KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1407



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 174/368 (47%), Gaps = 1/368 (0%)

Query: 205  PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN-PDVVTYNSLIHGLCHANDWNEAKR 263
            P       ++      G + KA  +  +++++  + P+V   N L+  L     W++A++
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 1133

Query: 264  LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
            L+ EM+ +       +  V++  LC  R+++E  +L++     G  P+   YN L+DG+C
Sbjct: 1134 LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1193

Query: 324  LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              G + R   L G ME+ G     V+Y  LIN   K  ++E+  SL+ EM  +G  P V 
Sbjct: 1194 RRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1253

Query: 384  TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
             YN++   L +      A+ +  +M   G   D  T+ T I GLC  G++ +A    R  
Sbjct: 1254 IYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1313

Query: 444  RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               +   +  +Y  LI G C  G L  A +L   +      P+VVT+  +I GL   G++
Sbjct: 1314 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1373

Query: 504  DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             +A  +   M E    PDV  +++LI G  +         +L +M EK V PD  + + +
Sbjct: 1374 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433

Query: 564  VDLLVKNE 571
            +D  +++E
Sbjct: 1434 IDGFIRSE 1441


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/548 (28%), Positives = 273/548 (49%), Gaps = 28/548 (5%)

Query: 23  SNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH 82
           +N SSLL H  +   +        P+   C F +  +   +   V  F  LL  LA  K+
Sbjct: 71  TNPSSLLQHLFNSEAQ--------PDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKN 122

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG-RILRSCFTPNAATFNSLIKGL 141
           Y+ ++ A            L++ F K    S   I     +L S    N+   + L+   
Sbjct: 123 YN-KIRA------------LLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAY 169

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                +  A   F +   +G   + ++ N ++  L + G   +  ++++EM      IGV
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR--RIGV 227

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
               N VT+  +I+GLCK G   KA  +   MK    +P V+TYN++I G C A    +A
Sbjct: 228 ----NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKA 283

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             L  EM+ + + P+ +TFN+++D  C++  +  A ++ + M ++G++PN  TYN+L++G
Sbjct: 284 DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  GK++ A  L   M  MG K + V+YN LING+CK K ++EA  +  ++  +G+ P 
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V+T+NTL     +  +++ A  L   M   GV  +  TY   I G C+ G + EA +L +
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     + D+  YN L+D LCK G  + A  L   +    L P+ +TYN +I G   +G
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREG 523

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
               A ++   ME+     +++T+++LI GF    +  + N LL++M EK ++P+ +   
Sbjct: 524 NSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583

Query: 562 IVVDLLVK 569
           I+ D +++
Sbjct: 584 ILRDEMME 591



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 141/431 (32%), Positives = 223/431 (51%), Gaps = 13/431 (3%)

Query: 71  NILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
           ++ L    +   Y  RL+A    P L +         K GR+ +    +  ++R     N
Sbjct: 176 DLALEGFDRAGDYGFRLSALSCNPMLVS-------LVKEGRIGVVESVYKEMIRRRIGVN 228

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
             TF+ +I GL    +  +A  +   +KA+G  P+VITYNT+I+G C+ G    A  L +
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
           EM      +     PN +T++ +IDG C++  V  AK +F +M+ + + P+VVTYNSLI+
Sbjct: 289 EM------VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLIN 342

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           GLC     +EA  L  +M   G++P+VVT+N +++  CK + + EA  +LD + +RG+ P
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  T+NTL+D +   G+++ A  L   M   G   +  +YN LI G+C+   V+EA  L 
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           +EM   G+K  +VTYN L   L +  +   A++L DEM   G+     TY   IDG  + 
Sbjct: 463 KEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFRE 522

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G    A+ +   +       +I  YN LI G C  G+L+ A  L   +    L+PN  TY
Sbjct: 523 GNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582

Query: 491 NIMIQGLCNDG 501
           +I+   +   G
Sbjct: 583 DILRDEMMEKG 593



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 204/402 (50%), Gaps = 18/402 (4%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATG 91
           +EG I V+       ++  M+R       V +F++++  L K   +         + A G
Sbjct: 206 KEGRIGVVES-----VYKEMIRRRIGVN-VVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
             P++ TYN +I+ +CK G++         ++     PN  TFN LI G   +  +  A 
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +F +++  G +PNV+TYN+LINGLC  G    AL L ++M+      G+  KPN VTY+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS------GMGLKPNVVTYN 373

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I+G CK+  + +A+ +   +    + P+V+T+N+LI     A   ++A  L   M+D 
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           GV P+V T+N ++   C+   + EA +L   M   G++ +  TYN L+D  C  G+  +A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L   M  +G     ++YN LI+GY +      AL++   M  KG +  +VTYN L  G
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG 553

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
                ++E A +L +EM   G+  +  TY    D + + G+I
Sbjct: 554 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 200/383 (52%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N++    ++    K G +D A   F +  D       ++ N ++  L         + ++
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM+ + +  +VVTF+V+++ LCK  K  +A  +++ M   G  P+  TYNT++DG+C  
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK+ +A+ L   M +     +++++NILI+G+C+++ V  A  ++ EM  +G++P VVTY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N+L  GL    +++ AL L D+M   G+  +  TY   I+G CK   + EA E+   +  
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++  +N LID   K+GR+  A+ L   +    + PNV TYN +I G C +G + +
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           AR L  +ME N    D++T+++L+    +  E  K   LL +M E  + P     + ++D
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517

Query: 566 LLVKNEISLKSLPSFLVQERQGE 588
              +   S  +L    + E++G 
Sbjct: 518 GYFREGNSTAALNVRTLMEKKGR 540



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 177/353 (50%), Gaps = 21/353 (5%)

Query: 246 NSLIHGLCHANDWNEAKRLFIEMM---------------------DQGVQPSVVTFNVIM 284
           +++ H L     W  A  + ++M+                     D G + S ++ N ++
Sbjct: 142 STIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
             L K  ++     +   M++R +  N  T++ +++G C +GK  +A ++   M++ G  
Sbjct: 202 VSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              ++YN +I+GYCK  ++ +A +L +EMV+K I P  +T+N L  G      V  A K+
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F+EMQR G+  +  TY + I+GLC NG + EA+ L   +  +  + ++  YN LI+G CK
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
              LK A E+   +    L PNV+T+N +I      G+MD A  L   M +    P+V T
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           ++ LI GF R     +  +L  +M+   +  D    +I+VD L K   + K++
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 237/493 (48%), Gaps = 11/493 (2%)

Query: 69  SFNILLASLAKNKHYDTRL----NATGLFP-NLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           + N LLA L +N   D          G+   ++  +N LI  +C++G          R+ 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                 +   +N+L+ G     ++  A  +   +K  G +PNV TY   I   CRT    
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A +L+E M       GV+   + VT S ++ GLC++G   +A ALF +M      P+ V
Sbjct: 257 EAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY +LI  L  A    E   L  EM+ +GV   +VT+  +MD L K  K DE    L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +   + PN  TY  L+D  C    ++ AE++   ME      + V+++ +ING+ K   +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A    R M  +GI P VVTY TL  G F+    + AL+++ +M  +GV  +     + 
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ++GL +NG I EA+ LF+        LD   Y  LIDGL K+G +  A++    L    +
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+ V YN+ I  LC  G+  +A+    +M      PD  T++ +I    R  E +K  +
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 544 LLHKMKEKKVMPD 556
           LLH+MK   + P+
Sbjct: 611 LLHEMKMSSIKPN 623



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 236/467 (50%), Gaps = 12/467 (2%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  V  +N L+A   +    D        +   G+ PN+ TY   I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  ++R+    +  T ++L+ GL  + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K        +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P+ VTY  LI  LC A++ +EA+++ +EM ++ + P+VVTF+ +++   K   +D+A+
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
               +M +RG+ PN  TY TL+DGF      + A E++  M   G K +    + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            +N ++EEA++L+++    G+    V Y TL  GLF+   +  A K   E+    +  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y  FI+ LC  G   EA      +R +  + D   YN +I   C+ G    A +L   
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +    + PN++TYN ++ GL   G ++KA+ L  +M     +P  +T
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 238/549 (43%), Gaps = 64/549 (11%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY +LI+  CK   V         +     +PN  TF+S+I G      + +A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------ANG- 195
                +K  G  PNV+TY TLI+G  +      AL ++ +M                NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 196 --NGEI-----------GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             NG+I           G     + V Y+T+IDGL K G +  A     ++ D N+ PD 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN  I+ LC    + EAK    EM + G++P   T+N ++   C+  +  +A +LL  
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--------------CK---- 344
           M    ++PN  TYNTL+ G    G + +A+ L   M S G              C     
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 345 ----------------HDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
                           H D++ YN L+   C +    +A  +  EM+  GI P  +T+N 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L LG  +   +++A   + +M    ++ +  T+ T + GL   G I EA  +   +    
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSG 794

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E +   Y+ L  G  K      A  L+C +     VP V TYN +I      G M +A+
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +LF DM++    P   T+D+L+ G+ RI   ++V + L  MKEK   P    +S +    
Sbjct: 855 ELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAF 914

Query: 568 VKNEISLKS 576
            K  ++ ++
Sbjct: 915 SKPGMTWQA 923



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 221/508 (43%), Gaps = 43/508 (8%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L K   Y   +   G+ PN+ TY  LI+ F K          +  +L      N    +S
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ GL    +I EA ALF      G   + + Y TLI+GL + G    A    +E+ + N
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 197 GE---------IGVVC--------------------KPNTVTYSTIIDGLCKEGFVDKAK 227
                      I  +C                    KP+  TY+T+I   C++G   KA 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  +MK  +I P+++TYN+L+ GL       +AK L  EM+  G  PS +T   ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            ++R++D    + + M+  G+  +   YNTL+   C  G   +A  +   M   G   D 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           +++N LI G+CK+  ++ A + Y +M+ + I P + T+NTL  GL  + ++  A  +  E
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-------DIQAYNCLID 460
           M++ G+  +  TY     G  K    +EA+ L+       CE+        +  YN LI 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGFVPKVSTYNALIS 842

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
              K+G +  A ELF  +    + P   TY+I++ G        + +    DM+E   +P
Sbjct: 843 DFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKM 548
              T   +   F +     +   LL  +
Sbjct: 903 SKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 229/517 (44%), Gaps = 39/517 (7%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           + N L+   C++ R+    IA  R  R    P    +N L+  L   +    A A+  ++
Sbjct: 75  SLNALLYSHCRL-RLLRPAIALLRSSR----PTTVAYNILLAALSDHA---HAPAVLAEM 126

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFE--------EMANGNGEIGVVCKP---- 205
              G   + +T NTL+ GLCR G    A  L +        ++   N  I   C+     
Sbjct: 127 CKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTP 186

Query: 206 ----------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
                           + V Y+T++ G C+ G VD A+ +   MK+  ++P+V TY   I
Sbjct: 187 AALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFI 246

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
              C      EA  L+  M+  GV   VVT + ++  LC++ +  EA  L   M + G  
Sbjct: 247 VYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAA 306

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TY TL+D     G+      L G M S G   D V+Y  L++   K  + +E    
Sbjct: 307 PNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDT 366

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
            R  +S  + P  VTY  L   L + H V+ A ++  EM+   ++ +  T+++ I+G  K
Sbjct: 367 LRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK 426

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVV 488
            G + +A E  R ++      ++  Y  LIDG  K      A E++   L  GV V N  
Sbjct: 427 RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV-NKF 485

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             + ++ GL  +G++++A  LF D   +  + D + +  LI G  +  +     +   ++
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
            ++ ++PDA + ++ ++ L       K   SFL + R
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLG-KFKEAKSFLTEMR 581



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 41/373 (10%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           +L    + K + T +   GL P+  TYN +I   C+ G  +        +  S   PN  
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT------------------------ 168
           T+N+L+ GL     + +A  L  ++ + G  P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 169 -----------YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
                      YNTL+  LC  G T  A  + EEM      +G    P+T+T++ +I G 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGIAPDTITFNALILGH 739

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK   +D A A + QM  +NI+P++ T+N+L+ GL       EA  + IEM   G++P+ 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +T++++     K     EA RL   MV +G  P   TYN L+  F   G + +A+ELF  
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+  G      +Y+IL++G+ + +   E     ++M  KG  P+  T + +     +   
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919

Query: 398 VEHALKLFDEMQR 410
              A +L   + R
Sbjct: 920 TWQAQRLLKNLYR 932


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 224/439 (51%), Gaps = 9/439 (2%)

Query: 129  PNAATFNSLIKGLHAESRIMEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            P+  T+N+L+     E R  + A L  ++  +  GC PN +TYN +I GL R G    A 
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 1176

Query: 187  NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
             L E M        +  K ++ TY+ +I GL   G V K   L L+M++E I P VVTYN
Sbjct: 1177 ELVEGMR-------LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 1229

Query: 247  SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            ++IHGL  +     A+  F EM   G+ P V+T+N +++  CK   + EA  L   + + 
Sbjct: 1230 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289

Query: 307  GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            G+ P   TYN L+DG+C +G +  A  L   M   GC  +  +Y IL+ G    + +  A
Sbjct: 1290 GLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 367  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
               + EM+SKG++P    YNT       +  +  A +L + +  +G+++DT TY   I G
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHG 1409

Query: 427  LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            LCK G + +A EL   +     + D   Y CLI   C+ G L+ A ++F ++    L+P+
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469

Query: 487  VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
             VT+ ++I   C  G +  A   F  M E    P+ IT+++LIH   R+      +   H
Sbjct: 1470 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 1529

Query: 547  KMKEKKVMPDASIVSIVVD 565
            +M E+ ++ +    ++++D
Sbjct: 1530 EMLERGLVANKYTYTLLID 1548



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 233/476 (48%), Gaps = 15/476 (3%)

Query: 65   PPVSSFNILLASLAKNKHYDT--------RLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
            P + ++N LL S  K    D             +G  PN  TYN++I    + G +    
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA- 1175

Query: 117  IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                  +R     ++ T+N LI GL A   + +   L  +++  G  P V+TYN +I+GL
Sbjct: 1176 AELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL 1235

Query: 177  CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
             ++G    A   F EM      +G++  P+ +TY+++++G CK G + +A  LF  ++  
Sbjct: 1236 LQSGLVEAAQVKFAEMR----AMGLL--PDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289

Query: 237  NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             + P V+TYN LI G C   D  EA+ L  EM +QG  P+V T+ ++M      R +  A
Sbjct: 1290 GLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 297  SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
                D M+ +G++P+   YNT +    ++G I RA EL   +   G   D V+YNILI+G
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHG 1409

Query: 357  YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
             CK   +++A  L  +MVS G++P  +TY  L     E   +  A K+F+ M  DG+   
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 1469

Query: 417  TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              T+T  I   C+ G +  A   FR +     E +   YN LI  LC+ GR + A   F 
Sbjct: 1470 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 1529

Query: 477  SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             +    LV N  TY ++I G C  G  + A   + +M +N   PD +T   L+ GF
Sbjct: 1530 EMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 224/458 (48%), Gaps = 7/458 (1%)

Query: 113  SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
            +L   AF  +      P+    N +++ L   +R  +  A+  ++   G EP+++TYNTL
Sbjct: 1066 TLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTL 1125

Query: 173  INGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
            ++   + G       L +EM   G+G     C PN VTY+ +I GL ++G +++A  L  
Sbjct: 1126 LDSFLKEGRKDKVAMLLKEMETRGSG-----CLPNDVTYNVVITGLTRKGDLEEAAELVE 1180

Query: 232  QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
             M+         TYN LI GL       +   L +EM ++G+ P+VVT+N ++  L ++ 
Sbjct: 1181 GMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSG 1239

Query: 292  KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
             ++ A      M   G+ P+  TYN+L++G+C  G +  A  LFG +   G     ++YN
Sbjct: 1240 LVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYN 1299

Query: 352  ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            ILI+GYC+  ++EEA  L  EM  +G  P V TY  L  G   +  +  A + FDEM   
Sbjct: 1300 ILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359

Query: 412  GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            G+  D   Y T I      G I  A EL   L +     D   YN LI GLCK+G LK A
Sbjct: 1360 GLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419

Query: 472  WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             EL   +    L P+ +TY  +I   C  G + +AR +F +M  +   P  +TF ++IH 
Sbjct: 1420 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 1479

Query: 532  FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            + R            KM E+ V P+    ++++  L +
Sbjct: 1480 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 1517



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 239/505 (47%), Gaps = 17/505 (3%)

Query: 61   HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR--- 111
            H   P V   N +L  L     +D        +   G+ P++ TYN L++ F K GR   
Sbjct: 1078 HGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDK 1137

Query: 112  VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
            V++           C  PN  T+N +I GL  +  + EAA L   ++    + +  TYN 
Sbjct: 1138 VAMLLKEMETRGSGCL-PNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNP 1195

Query: 172  LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
            LI GL   G      +L  EM N     G++  P  VTY+ +I GL + G V+ A+  F 
Sbjct: 1196 LITGLLARGCVKKVYDLQLEMENE----GIM--PTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 232  QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            +M+   + PDV+TYNSL++G C A +  EA  LF ++   G+ P+V+T+N+++D  C+  
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309

Query: 292  KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
             ++EA  L + M ++G  PN CTY  LM G   +  +  A E F  M S G + D  +YN
Sbjct: 1310 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYN 1369

Query: 352  ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
              I       ++  A  L   ++ +GI    VTYN L  GL +   ++ A +L  +M  +
Sbjct: 1370 TRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSN 1429

Query: 412  GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            G+  D  TYT  I   C+ G + EA ++F  +           +  +I   C+ G L  A
Sbjct: 1430 GLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSA 1489

Query: 472  WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +  F  +    + PN +TYN++I  LC  G+   A   F +M E     +  T+ +LI G
Sbjct: 1490 YGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 1549

Query: 532  FIRINEPSKVNELLHKMKEKKVMPD 556
              ++           +M +  + PD
Sbjct: 1550 NCKVGNWEDAMRFYFEMHQNGIHPD 1574


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 251/508 (49%), Gaps = 13/508 (2%)

Query: 70  FNILLASLAKNK----HYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           ++ LL SLAK       Y T  R+ A G    +  Y  ++N  CK G      +   +IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG-CEPNVITYNTLINGLCRTGHT 182
           +  F  ++    SL+ G      + +A  +F  +   G C PN ++Y+ LI+GLC  G  
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  L ++M    GE G  C+P+T TY+ +I  LC  G +DKA  LF +M      P+V
Sbjct: 283 EEAFGLKDQM----GEKG--CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNV 336

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY  LI GLC      EA  +  +M+  G+ PSV+T+N +++  CK+ ++  A  LL +
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTV 396

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +R  +PN  T+N LM+G C +GK  +A  L   M   G   D VSYN+LI+G C+   
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  A  L   M S  ++P  +T+  +     +  + + A      M R G++ D  T TT
Sbjct: 457 MNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG+C  G   +A+ +  TL  ++      + N ++D L K  +LK    +   +    
Sbjct: 517 LIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG 576

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           LVP+VVTY  ++ GL   G +  +  +   M+ +   P+V  + ++I+G  +     +  
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +LL  M++  V P+    +++V   V N
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNN 664



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 241/471 (51%), Gaps = 28/471 (5%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN  +Y+ILI+  C++GR+   F    ++      P+  T+  LIK L     I +A  L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK--------P 205
           F ++ A GC+PNV TY  LI+GLCR G          E ANG      VC+        P
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKI--------EEANG------VCRKMVKDGIFP 369

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + +TY+ +I+G CK+G V  A  L   M+     P+V T+N L+ GLC      +A  L 
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+D G+ P +V++NV++D LC+   M+ A +LL  M    + P+  T+  +++ FC  
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQ 489

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK + A    G M   G   D+V+   LI+G C   +  +AL +   +V   +  T  + 
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSL 549

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +   L +  +++  L +  ++ + G+     TYTT +DGL ++G I  +  +   +++
Sbjct: 550 NVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKL 609

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  ++  Y  +I+GLC+ GR++ A +L  ++    + PN VTY +M++G  N+G++D+
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGF------IRINEPSKVNELLHKMKE 550
           A +    M E     +   +  L+ GF      IR  +P  + EL+  +++
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQ 720



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 240/513 (46%), Gaps = 56/513 (10%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++AF +FD M+      P V ++ +L+  L ++   +       ++   G+FP++ TYN 
Sbjct: 318 DKAFNLFDEMI-ARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNA 376

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN +CK GRV   F     + +    PN  TFN L++GL    +  +A  L  ++   G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P++++YN LI+GLCR GH  +A  L   M + + E      P+ +T++ II+  CK+G
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLE------PDCLTFTAIINAFCKQG 490

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             D A A    M  + I+ D VT  +LI G+C+     +A  +   ++   +  +  + N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLN 550

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           VI+D L K  K+ E   +L  + + G+ P+  TY TL+DG    G I+ +  +   M+  
Sbjct: 551 VILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLS 610

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  +   Y I+ING C+   VEEA  L   M   G+ P  VTY  +  G     +++ A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDG----------------------------------- 426
           L+    M   G   + R Y++ + G                                   
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCI 730

Query: 427 -----LCKNGYIIEAVELFRTLRILKCELDIQ-AYNCLIDGLCKSGRLKFAWELFCSLPH 480
                LCK G   E+  L +T  ILK  + ++ A + +++  C   +     EL   +  
Sbjct: 731 FLVTRLCKEGRTDESNGLVQT--ILKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLK 788

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
              VP+  ++ ++IQGL  +G  ++AR+L +++
Sbjct: 789 SGFVPSFKSFCLVIQGLKKEGDTERARELVMEL 821



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 216/429 (50%), Gaps = 8/429 (1%)

Query: 144 ESRIMEAAALFTKLKAF-GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
           E  +++  + F +L+   G   N   Y++L+  L +     +A   +  M      +G++
Sbjct: 137 EKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI 196

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
                  Y TI++ LCK G+ + A+    ++       D     SL+ G C   +  +A 
Sbjct: 197 ------DYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDAL 250

Query: 263 RLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           ++F  M  +G   P+ V++++++  LC+  +++EA  L D M ++G +P+  TY  L+  
Sbjct: 251 KVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  G I++A  LF  M + GCK +  +Y +LI+G C++ ++EEA  + R+MV  GI P+
Sbjct: 311 LCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPS 370

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           V+TYN L  G  +  +V  A +L   M++     + RT+   ++GLC+ G   +AV L +
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +       DI +YN LIDGLC+ G +  A++L  S+    L P+ +T+  +I   C  G
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQG 490

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           + D A      M     + D +T   LI G   + +      +L  + + +++     ++
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLN 550

Query: 562 IVVDLLVKN 570
           +++D+L K 
Sbjct: 551 VILDMLSKG 559



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 1/219 (0%)

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           YR M + G    ++ Y T+   L +    E A     ++ + G   D+   T+ + G C+
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 430 NGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
              + +A+++F  + R   C  +  +Y+ LI GLC+ GRL+ A+ L   +      P+  
Sbjct: 243 GLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TY ++I+ LC+ G +DKA +LF +M      P+V T+ +LI G  R  +  + N +  KM
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +  + P     + +++   K+   + +     V E++ 
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 210/408 (51%), Gaps = 9/408 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ ++ N+L+ GL    R+  A   F         P++ T+NT+I+GLCR G    A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK---AKALFLQMKDENINPDVVTY 245
            +++            P+  TY+++IDG CK+G          L  +M +  I+P  VT+
Sbjct: 214 AKDIKAWG------LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             LI+G C  ++   A R+F EM  QG+  SVVT+N ++  LC   K++E  +L++ M  
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ PN  T+  ++ GFC  G +  A +    M     + D V Y ILI+GY +  ++E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMED 387

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+++   M  KGI P V TYN L  G         A  L DEM+  G+ AD  TY   I 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LC  G + +AV+L   +  +  E +   YN +I G C  G +K A+E+   +       
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           NVVTYN+ I+  C  G+MD+A DL  +M +    P+ IT++ +  G +
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/448 (32%), Positives = 222/448 (49%), Gaps = 18/448 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +L +  +  P+ +++  L  LA   H   R       P+  + N L+       RV L  
Sbjct: 126 VLALARASQPLRAYDAFL--LAGESHPRHR-------PSTSSVNALLAGLVGAKRVDLAE 176

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
            AF   LR   +P+  TFN++I GL    ++ +A  +   +KA+G  P+V TYN+LI+G 
Sbjct: 177 KAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGY 236

Query: 177 CRTGHT--MIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           C+ G    M  ++ L +EM     E G+   P  VT+  +I+G CK      A  +F +M
Sbjct: 237 CKKGGAGNMYHVDMLLKEMV----EAGI--SPTAVTFGVLINGYCKNSNTAAAVRVFEEM 290

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           K + I   VVTYNSLI GLC      E  +L  EM D G+ P+ +TF  ++   CK   M
Sbjct: 291 KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMM 350

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A+  +D M +R V P+   Y  L+DG+  +GK+  A  +  +M   G   +  +YN L
Sbjct: 351 ADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCL 410

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I G+ ++ +   A  L  EM  KGI+  VVTYN L   L    +V  A+KL DEM   G+
Sbjct: 411 ITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  TY T I G C  G I  A E+   +   +   ++  YN  I   C+ G++  A +
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           L   +    LVPN +TY  + +G+   G
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 201/398 (50%), Gaps = 9/398 (2%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  + N L+ GL       +A   F               P+  T++T+I GLC+ G 
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRR------VSPDIYTFNTVISGLCRIGQ 206

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCH---ANDWNEAKRLFIEMMDQGVQPSVVT 279
           + KA  +   +K   + P V TYNSLI G C    A +      L  EM++ G+ P+ VT
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F V+++  CKN     A R+ + M Q+G+  +  TYN+L+ G C  GK+    +L   ME
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            +G   +++++  ++ G+CK   + +A      M  + ++P VV Y  L  G   + ++E
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKME 386

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+ + + M + G++ +  TY   I G  ++G    A  L   ++    E D+  YN LI
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
             LC  G ++ A +L   +    L PN +TYN +IQG C+ G +  A ++   ME+    
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKR 506

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +V+T+++ I  F +I +  + N+LL++M +K ++P+ 
Sbjct: 507 ANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 188/385 (48%), Gaps = 51/385 (13%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAK----NKHYDTR--LNATGLFPNLYTYNILINCFC 107
           F   LR   SP  + +FN +++ L +     K  D    + A GL P++ TYN LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 108 KIGRVSLGF---IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           K G     +   +    ++ +  +P A TF  LI G    S    A  +F ++K  G   
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V+TYN+LI+GLC  G     + L EEM     ++G+   PN +T+  ++ G CK+G + 
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMA 351

Query: 225 KAKALFLQMKDENINPDVV-----------------------------------TYNSLI 249
            A      M + N+ PDVV                                   TYN LI
Sbjct: 352 DANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G   + DW  A  L  EM ++G++  VVT+NV++  LC   ++ +A +LLD M + G+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TYNT++ GFC  G I  A E+   ME    + + V+YN+ I  +C+  +++EA  L
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDL 531

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFE 394
             EM+ K + P  +TY T+  G+ E
Sbjct: 532 LNEMLDKCLVPNGITYETIKEGMME 556



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 153/297 (51%), Gaps = 3/297 (1%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +PS  + N ++  L   +++D A +     ++R V P+  T+NT++ G C +G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS---LYREMVSKGIKPTVVTYNTLFL 390
           +   +++ G      +YN LI+GYCK            L +EMV  GI PT VT+  L  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +      A+++F+EM++ G+AA   TY + I GLC  G + E V+L   +  L    
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   + C++ G CK G +  A +    +    + P+VV Y I+I G    G+M+ A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             M +   +P+V T++ LI GF R  +    + LL +MKEK +  D    ++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V+++N L+   +++  + +       +   G+  ++ TYN+LI   C  G V      
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      PN  T+N++I+G   +  I  A  + T+++      NV+TYN  I   C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            G    A +L  EM      +     PN +TY TI +G+ ++G+    +   +    EN
Sbjct: 522 IGKMDEANDLLNEM------LDKCLVPNGITYETIKEGMMEKGYTPDIRGCTVSQASEN 574



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 3/135 (2%)

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N L+ GL  + R+  A + F S     + P++ T+N +I GLC  GQ+ KA D+  D++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 516 NAAAPDVITFDMLIHGFIRINEPSK---VNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
              AP V T++ LI G+ +         V+ LL +M E  + P A    ++++   KN  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 573 SLKSLPSFLVQERQG 587
           +  ++  F   ++QG
Sbjct: 280 TAAAVRVFEEMKQQG 294


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 222/448 (49%), Gaps = 15/448 (3%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           A G    S   PN ++FN L++G  A        AL  ++KA G   N  T+  +++ LC
Sbjct: 16  ALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALC 75

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCK-------PNTVTYSTIIDGLCKEGFVDKAKALF 230
                  A++ F      N      C+       P++VTY+ I+DGL K G  D     +
Sbjct: 76  ARRDLDKAVSYF------NSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYY 129

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M      P ++TY  L+ GLC A+    A  +F EM+ +G +P ++ ++ ++D L K 
Sbjct: 130 EKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKA 189

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            ++DEA +L+DLM+ RG  P A  Y +++ G C  G+I  A +    M     +    +Y
Sbjct: 190 GRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTY 249

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           + ++ GY    +VEEA ++  EM  +   P  ++Y      L+ I + E A K+F+ M  
Sbjct: 250 SFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 309

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   D  TY   ID  CK G +  A  + R +     + +   Y  ++DG  KS RL+ 
Sbjct: 310 KGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEE 369

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA--APDVITFDML 528
           A EL+  +    ++P+ VTYN +I  LC   +MD+A +L  +M+       P ++T+ M+
Sbjct: 370 ALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMI 429

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPD 556
           IHG  ++    +  +LL +M +  V+PD
Sbjct: 430 IHGLGKVGMEERAFDLLAEMIDNGVIPD 457



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 247/509 (48%), Gaps = 22/509 (4%)

Query: 63  SPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           S P VSSFNILL   A    ++        + A G+  N  T+ ++++  C    +    
Sbjct: 25  SEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAV 84

Query: 117 IAFG-------RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
             F        R+  +   P++ T+ +++ GL            + K+ A  CEP ++TY
Sbjct: 85  SYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTY 144

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
             L++GLC+      A ++FEEM           KP+ + YS++IDGL K G VD+A+ L
Sbjct: 145 TVLVDGLCKAHKVERACDVFEEMIRKGH------KPDIIAYSSLIDGLSKAGRVDEARKL 198

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
              M      P  V Y S++ GLC      EA +   EM  + ++P V T++ I+     
Sbjct: 199 VDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIG 258

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             K++EA  +++ M  R   P+  +Y   ++    +G+   AE++F +M   GCK D  +
Sbjct: 259 MGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHT 318

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y I+I+ +CK   +  A  + R M    +KP    Y  +  G  +  ++E AL+L+  + 
Sbjct: 319 YGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 378

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD--IQAYNCLIDGLCKSGR 467
           +DG+   T TY T I+ LCK   + EA+EL R ++  K EL+  I  Y+ +I GL K G 
Sbjct: 379 KDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGM 438

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
            + A++L   +    ++P+  TY  +IQ L   G++ +A +L  +M +    PD  T+  
Sbjct: 439 EERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGT 498

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L+    R ++     +LL +M      P+
Sbjct: 499 LVQILCR-SDVDAAWDLLQEMMRNGHTPN 526



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 210/435 (48%), Gaps = 15/435 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++  ++  L K  +YD  L       A+   P L TY +L++  CK  +V      
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++R    P+   ++SLI GL    R+ EA  L   + A G  P  + Y +++ GLC+
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+   +EM        V       TYS I+ G    G V++A A+  +M D + 
Sbjct: 224 CGRIQEAVKTIQEMRRRRLRPRV------DTYSFIVTGYIGMGKVEEAFAVMEEMADRDC 277

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD ++Y   I  L       EA+++F  M+++G +P + T+ +I+D  CK   M  A+ 
Sbjct: 278 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 337

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L LM +  V+PN   Y  +MDGF    ++  A EL+  +   G     V+YN +IN  C
Sbjct: 338 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 397

Query: 359 KNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           K K+++EAL L REM  +   ++P++VTY+ +  GL ++   E A  L  EM  +GV  D
Sbjct: 398 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 457

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT+ I  L   G +  A+EL   +       D   Y  L+  LC+S  +  AW+L  
Sbjct: 458 CFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQ 516

Query: 477 SLPHGVLVPNVVTYN 491
            +      PN  T+ 
Sbjct: 517 EMMRNGHTPNEFTFK 531



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 10/284 (3%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSS--FNILLASLAKNKHYDTRLNA---TGLFP 94
           G I +    EAF + + M     +P  +S   F   L S+ + +  +         G  P
Sbjct: 255 GYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 314

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           +++TY I+I+ FCK G ++        + ++   PN   +  ++ G    SR+ EA  L+
Sbjct: 315 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 374

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++   G  P+ +TYNT+IN LC+      AL L  EM     E+    +P+ VTYS II
Sbjct: 375 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL----EPSIVTYSMII 430

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GL K G  ++A  L  +M D  + PD  TY SLI  L  A   + A  L  EM+  G+ 
Sbjct: 431 HGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIF 490

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           P   T+  ++  LC++  +D A  LL  M++ G  PN  T+  +
Sbjct: 491 PDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/594 (26%), Positives = 277/594 (46%), Gaps = 84/594 (14%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNI 101
           N+A   F  M  +    P V S+N LL +  +   +D   + +  F      PNL TYNI
Sbjct: 97  NKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNI 156

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI   CK  ++         +      P+  ++ +LI G+     ++ A  +F ++   G
Sbjct: 157 LIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRG 216

Query: 162 ----------------------------------CE--PNVITYNTLINGLCRTGHTMIA 185
                                             C   PNV+TYN +INGLC+ G    +
Sbjct: 217 VVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDES 276

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           L ++E M     E       +  TYS++I GLC+ G +D A  ++ ++ + ++  D VT+
Sbjct: 277 LEIWERMTKNERE------KDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTH 330

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N++++G C A    E+  L++ M  +  Q +VV++N+++  L +N K++EA  + +L+ +
Sbjct: 331 NAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCK 389

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +G RP + TY  L+ G C  G++N+A ++F   E    K D  +Y+ +++G CK   ++E
Sbjct: 390 KGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDE 449

Query: 366 ALSL-----------------------------------YREMVSKGIKPTVVTYNTLFL 390
           A+S+                                   +REM  KG  PT+V+YNTL  
Sbjct: 450 AISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIK 509

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  +   A     EM       D  T +  +DGLC+   I  A+ L++       + 
Sbjct: 510 GLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKP 569

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  YN L+ GLC   +L+ A +L+  +     VPN+VT N +++GL      +KA +++
Sbjct: 570 DITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIW 629

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
             + ++   PD+I++++ I G    +  S   E L+    + ++P A   +I+V
Sbjct: 630 DCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 247/498 (49%), Gaps = 17/498 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RL-NATGLFPNLYTYNIL 102
           A  +FD M  +      V+ +N+L+    K+  YD       RL     ++PN+ TYNI+
Sbjct: 205 ALKVFDEM-SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIM 263

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  CK GR       + R+ ++    +  T++SLI GL     I  A  ++ ++     
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             + +T+N ++NG CR G    +  L+  M   N +         V+Y+ +I GL + G 
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-------TVVSYNILIKGLFENGK 376

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V++A +++  +  +   P+  TY  LIHGLC     N+A ++F E  D   +     ++ 
Sbjct: 377 VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSS 436

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LCK  +MDEA  +++ M +RG + +    N L++GF    K+  A   F  ME  G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C    VSYN LI G CK +   EA S  +EM+ K  KP ++T + L  GL +  ++E AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L+ +    G   D   Y   + GLC    + +A++L+  ++   C  ++   N L++GL
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616

Query: 463 CKSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            K    + A E++ C L  G L P++++YNI I+GLC+  ++  A +   D       P 
Sbjct: 617 YKVRDYEKASEIWDCILKDG-LHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPT 675

Query: 522 VITFDMLIHGFIRINEPS 539
            +T+++L+   +     S
Sbjct: 676 AVTWNILVRAAVNFRTSS 693



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 234/446 (52%), Gaps = 12/446 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   ++N+L+      +    A +     ++    PN+ TYN LI   C+      A++L
Sbjct: 114 PGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISL 173

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            + M + N       KP+  +Y T+I+G+ K G +  A  +F +M    +  DV  YN L
Sbjct: 174 LDWMWSQN------LKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNML 227

Query: 249 IHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           I G     D+++ K ++  ++ D  V P+VVT+N++++ LCK  + DE+  + + M +  
Sbjct: 228 IDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNE 287

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              +  TY++L+ G C  G I+ A  ++  +       D V++N ++NG+C+  +++E+ 
Sbjct: 288 REKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESF 347

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+  M  +  + TVV+YN L  GLFE  +VE A+ +++ + + G   ++ TY   I GL
Sbjct: 348 ELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGL 406

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG--VLVP 485
           CKNG + +A+++F+       +LD  AY+ ++DGLCK GR+  A  +   +      L P
Sbjct: 407 CKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDP 466

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +V   N +I G     +++ A + F +ME    +P +++++ LI G  +    S+    +
Sbjct: 467 HVC--NPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFV 524

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNE 571
            +M EK+  PD    S+++D L + +
Sbjct: 525 KEMLEKEWKPDMITCSLLMDGLCQEK 550


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 265/577 (45%), Gaps = 55/577 (9%)

Query: 25  FSSLLVHFRDLTTREGDINVITP----NEAFCIFDYMLRMHPS-PPPVSSFNILLASLAK 79
           FS+L  H ++   R   IN++      + A  + D ML       P   +  I+  +L K
Sbjct: 29  FSTLDSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLK 88

Query: 80  NKHYDTRLNAT------------GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
               + R+                +FP+      LI+  C+ G  +L +     ++    
Sbjct: 89  IDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNG 148

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
             +AA  N+L+ GL       +   L  K+K    +P VIT+  LIN LC+      AL 
Sbjct: 149 LKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALE 208

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +FE+M     E  V   P+T+ Y+T+IDGLCK G  ++A  L  +M+ +   P   T+N 
Sbjct: 209 VFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNC 268

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI+G C + +   A +LF EM +  ++P+V+T N ++D +CK+ ++  A     +M Q+G
Sbjct: 269 LINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKG 328

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC------------------KHDDVS 349
           ++ N  TY   ++ FC +  +N+A E    M   GC                  + DD S
Sbjct: 329 LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDAS 388

Query: 350 -----------------YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
                            YN+LI+ +CK  +++ A     EM   G+KP  VTYNTL    
Sbjct: 389 SVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYF 448

Query: 393 FEIHQVEHALKLFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL- 450
            +I   + A K   +M + +G++    TY   I   C N  I EA+++F+ +  +  ++ 
Sbjct: 449 SKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVP 508

Query: 451 -DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +   YN LID LCK  ++ FA  L   +    ++PN  TYN + + L +   +DKA  L
Sbjct: 509 PNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKL 568

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
              M E A  PD IT ++L      + E +K+ +   
Sbjct: 569 MDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQ 605



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 151/493 (30%), Positives = 232/493 (47%), Gaps = 25/493 (5%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRIL--RSCFTPNAAT----FNSLIK--GLHAESR 146
           N    N +IN   K GRV         +L   S F PN  T    FN+L+K  GL    +
Sbjct: 38  NTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVK 97

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             E A L +K       P+ I    LI+ LCR+G+T +A N+ + +   NG        +
Sbjct: 98  EDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNG------LKD 151

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
               + ++ GL K     K   L  +MKD NI P V+T+  LI+ LC     ++A  +F 
Sbjct: 152 AAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFE 211

Query: 267 EMMDQG------VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           +M  +       V P  + +N ++D LCK  + +EA  L+  M      P   T+N L++
Sbjct: 212 KMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLIN 271

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+C  G+I  A +LF  ME+   + + ++ N L++G CK+  +  A+  +R M  KG+K 
Sbjct: 272 GYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKG 331

Query: 381 TVVTYNTLFLGLF-EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
             VTY T+F+  F  ++ +  A++  DEM +DG   D   Y T I GL + G + +A  +
Sbjct: 332 NNVTY-TVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSV 390

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              L+     LD   YN LI   CK  +L  A E    +    + P+ VTYN +I     
Sbjct: 391 VSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSK 450

Query: 500 DGQMDKARDLFLDM-EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE--KKVMPD 556
            G    A      M EE   +P V T+  LIH +   N   +  ++  +M     KV P+
Sbjct: 451 IGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPN 510

Query: 557 ASIVSIVVDLLVK 569
             I +I++D L K
Sbjct: 511 TVIYNILIDSLCK 523



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 43/321 (13%)

Query: 281 NVIMDELCKNRKMDEASRLLD--LMVQRGVRPNACT----YNTLMDGFCLMGKINRAEEL 334
           N I++ L K+ ++D A  +LD  L+ +   RPN  T    +N L+    L G++ + +E+
Sbjct: 43  NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRV-KEDEI 101

Query: 335 FGSMESMGCKH----DDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVVTYNTLF 389
            G +   G KH    D ++   LI+  C++     A ++    M+  G+K      N L 
Sbjct: 102 AGLVSKFG-KHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKD-AAPCNALL 159

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  +      L  +M+   +     T+   I+ LCK   I +A+E+F  ++  K E
Sbjct: 160 TGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEE 219

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +                              + P+ + YN +I GLC  G+ ++A  L
Sbjct: 220 TKV-----------------------------FVAPDTIMYNTLIDGLCKVGRQEEALCL 250

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M  +  AP   TF+ LI+G+ R  E    ++L ++M+  ++ P+   ++ +VD + K
Sbjct: 251 MGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCK 310

Query: 570 NEISLKSLPSFLVQERQGEVG 590
           +     ++  F V +++G  G
Sbjct: 311 HNRISTAVEFFRVMQQKGLKG 331


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 244/517 (47%), Gaps = 22/517 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF I   M+R     P  S++  ++  L + K  +        +   G+ P++YTY IL
Sbjct: 435 KAFQILKEMMR-KGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ FCK G +      F  +     +PN  T+ +L+       ++++A  +F ++    C
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI----------GVVCKPNTVTYST 212
            PN +TY+ LI+GLC+ G    A  ++E++   +G +               PN VTY  
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGA 613

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDGLCK   V  A  L   M      P+ + Y++LI G C     + A+ +F+ M   G
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             PSV T+  ++D + K+ ++D A ++L  M+     PN  TY  ++DG   +G+I +A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKAL 733

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   ME  GC  + V+Y  LI+G  K  + + +L L+++M SKG  P  VTY  L    
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                ++ A  L DEM+        + Y   + G  K    I ++ L   +   +     
Sbjct: 794 CAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHETVPIA 851

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT---YNIMIQGLCNDGQMDKARDL 509
             Y  LID   K+GRL+ A EL   L       N+ +   Y  +IQ LC   Q+++A  L
Sbjct: 852 PVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTL 911

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           + +M      PD+I F  L+ G I +N+  +  +L +
Sbjct: 912 YTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCY 948



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 224/504 (44%), Gaps = 32/504 (6%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+      PN+ TY  L++ F K  +          ++     PN + FNSL+ G     
Sbjct: 296 RMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG 355

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM------IALNLFEEMANGNGEI 199
               A  LF ++   G  P  + YN  I  +C            +   ++EEM      +
Sbjct: 356 DYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM------L 409

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
              C  N V  +     LC  G  +KA  +  +M  +   PD  TY  +I  LC A    
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           ++  LF EM   GV P V T+ +++D  CK   +++A    D M   G  PN  TY  L+
Sbjct: 470 KSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-- 377
             +    ++ +A ++F  M    C  + V+Y+ LI+G CK  E+++A  +Y +++     
Sbjct: 530 HAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGN 589

Query: 378 --------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                         I P VVTY  L  GL +  +V  A +L D M   G   +   Y   
Sbjct: 590 VESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDAL 649

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           IDG CK G I  A E+F  LR+ KC     +  Y  LID + K GRL  A ++   + + 
Sbjct: 650 IDGFCKIGKIDNAQEVF--LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND 707

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              PNVVTY  MI GL   G+++KA +L   MEE   +P+V+T+  LI G  +  +    
Sbjct: 708 SCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADAS 767

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
            +L  +M  K   P+     ++++
Sbjct: 768 LKLFKQMNSKGCAPNYVTYRVLIN 791



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 257/589 (43%), Gaps = 78/589 (13%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++N L+  LA     +        ++A+G   +  T        CK+GR +    A
Sbjct: 202 PSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWA---DA 258

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +  F  +      +I GL   S   EA +   +++   C PNV+TY TL++G  +
Sbjct: 259 LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 318

Query: 179 T---GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
               G     +N+   M  G       C PN   +++++ G C  G    A  LF +M  
Sbjct: 319 KKQFGWCKRIINMM--MTEG-------CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTT 369

Query: 236 ENINPDVVTYNSLIHG-----------------------------------------LCH 254
               P  V YN  I                                           LC 
Sbjct: 370 CGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCG 429

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
              + +A ++  EMM +G  P   T+  ++  LC+ +K++++  L   M + GV P+  T
Sbjct: 430 VGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYT 489

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y  L+D FC  G I +A   F  M S+GC  + V+Y  L++ Y K+K++ +A  ++  MV
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-------QRD---------GVAADTR 418
                P  VTY+ L  GL +  +++ A ++++++       + D          +A +  
Sbjct: 550 DAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVV 609

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   IDGLCK   + +A EL   +    CE +   Y+ LIDG CK G++  A E+F  +
Sbjct: 610 TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRM 669

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                +P+V TY  +I  +  DG++D A  +  +M  ++  P+V+T+  +I G  ++ E 
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            K   LL  M+EK   P+    + ++D L K   +  SL  F     +G
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG 778



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 238/534 (44%), Gaps = 53/534 (9%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+L+   C+ G         GR+    + P+A T+N+L++ L +  ++     +  ++ A
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFE------------EMANGNGEIGVV----- 202
            G   +  T       LC+ G    ALN+ E            +M +G  E  +      
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMS 292

Query: 203 ---------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C PN VTY T++ G  K+      K +   M  E  NP+   +NSL+HG C
Sbjct: 293 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYC 352

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM--VQRGVRPN 311
           +A D+  A +LF  M   G  P  V +N+ +  +C   ++  A  LLDL+  V   +   
Sbjct: 353 NAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYEEMLAA 411

Query: 312 ACTYNTLMDG-----FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           +C  N +         C +GK  +A ++   M   G   D  +Y  +I   C+ K+VE++
Sbjct: 412 SCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKS 471

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L++EM   G+ P V TY  L     +   +E A   FDEM+  G + +  TYT  +  
Sbjct: 472 FLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-------- 478
             K+  +I+A ++F  +    C  +   Y+ LIDGLCK+G ++ A E++  L        
Sbjct: 532 YLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVE 591

Query: 479 --------PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
                       + PNVVTY  +I GLC   ++  A +L   M      P+ I +D LI 
Sbjct: 592 SDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALID 651

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN---EISLKSLPSFL 581
           GF +I +     E+  +M +   +P     + ++D + K+   ++++K L   L
Sbjct: 652 GFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 135/363 (37%), Gaps = 38/363 (10%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y++L   L   +    A+RL  E+ +   +      NV++   C++   DEA   L  + 
Sbjct: 137 YDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLK 196

Query: 305 QRGVRPNACTYNTLMD---------------------GFCL-----------MGKINRAE 332
             G RP+A TYN L+                      GFC+           + K+ R  
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWA 256

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +    +E      D V    +I+G  +     EA+S    M      P VVTY TL  G 
Sbjct: 257 DALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGF 316

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  Q     ++ + M  +G   +   + + + G C  G    A +LF  +         
Sbjct: 317 LKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGY 376

Query: 453 QAYNCLIDGLCKSGRLKFA------WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            AYN  I  +C    L  A       +++  +     V N V      + LC  G+ +KA
Sbjct: 377 VAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKA 436

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +  +M      PD  T+  +I    +  +  K   L  +MK   V PD    +I++D 
Sbjct: 437 FQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDS 496

Query: 567 LVK 569
             K
Sbjct: 497 FCK 499



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 11/215 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K    D  L      N+ G  PN  TY +LIN  C  G +    + 
Sbjct: 746 PNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLL 805

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  + +  +   ++  ++G     + + +  L  ++++    P    Y  LI+   +
Sbjct: 806 LDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL L +E+   +  + +    +T  Y+++I  LC    V++A  L+ +M  + I
Sbjct: 864 AGRLETALELHKELVEVSSSLNMT---STGMYASLIQALCLASQVEEAFTLYTEMTRKGI 920

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            PD++ + SL+ GL   N W+EA +L      +GV
Sbjct: 921 VPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGV 955


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 232/463 (50%), Gaps = 12/463 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++ +YNI+I   C  GR S  +     +       +  T   ++K L     + +A + F
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +     + +V++Y TLI GL  +G   +A  LFEEM++   +         V Y+ II
Sbjct: 63  HSVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-------VVAYTAII 114

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           + L K    D+A A F +M     +PD+ T+  +I GLC A   N A  +F EM  +G +
Sbjct: 115 NALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWK 174

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P ++ +  ++D L K   MDEA +LL  +V RG++P   TY + + G C  G++  A +L
Sbjct: 175 PDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKL 234

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M  M C  +    + +  GY    ++EEAL+L  EMV KG+   V  Y  L  GLF 
Sbjct: 235 VREMGKM-CAAE--VLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFY 291

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           + + + A ++F+ M R G   DTRTY   +   CK G +  A ++   +     E +   
Sbjct: 292 VRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHV 351

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM- 513
           YN L+DG     R + A  ++ ++   ++ P++VTYNI++ GLC  GQ   AR +  +M 
Sbjct: 352 YNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMR 411

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           E +   P ++++  LIHG  +     +  ++  +M +  V+PD
Sbjct: 412 ERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPD 454



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 207/416 (49%), Gaps = 10/416 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ A    P+L T+ ++I   CK G+++     F  + R  + P+   + SL+ GL   S
Sbjct: 132 RMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKAS 191

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            + EA  L  ++ + G +P  +TY + I+GLC+ G    A  L  EM       G +C  
Sbjct: 192 MMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM-------GKMCAA 244

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             +    I  G   EG +++A  L  +M  + +  DV  Y +LIHGL +    +EA+ +F
Sbjct: 245 EVL--HCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMF 302

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+ QG  P   T+ +I+   CK  KM  A +++++M   G+  N   YN+LMDGF  +
Sbjct: 303 EAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGV 362

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVT 384
            +   A  ++ +M     K   V+YNIL+ G CK  +  +A  + REM  + GI PT+V+
Sbjct: 363 NRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVS 422

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  GL +  + + A+ +F EM  +GV  D  + T+ I  L     + EA +L R + 
Sbjct: 423 YRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMP 482

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
            +    D  AYN L+  LC   ++  AW++   +     VP+  T+  M  G   D
Sbjct: 483 RMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGFKAD 538



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 238/502 (47%), Gaps = 45/502 (8%)

Query: 69  SFNILLASLAKNKHYDTRLNA-TGLFP----NLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +  I+L +L + K  D  L+    + P    ++ +Y  LI      GR+ +    F   +
Sbjct: 41  THGIILKALCERKEVDQALSYFHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEE-M 99

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
            S  +     + ++I  L    R  +A A F ++ A  C+P++ T+  +I GLC+ G   
Sbjct: 100 SSSGSQCVVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLN 159

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  +F+EM N  G      KP+ + Y++++DGL K   +D+A+ L  ++    + P  V
Sbjct: 160 RACEVFQEM-NRKG-----WKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEV 213

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEM--------------------------------MDQ 271
           TY S I GLC      EA +L  EM                                + +
Sbjct: 214 TYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKK 273

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           GV   V  +  ++  L   R+ DEA  + + MV++G  P+  TY  ++  FC  GK+  A
Sbjct: 274 GVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAA 333

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            ++   M++ G + +   YN L++G+       EA+++Y  M+ K +KP++VTYN L LG
Sbjct: 334 CKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLG 393

Query: 392 LFEIHQVEHALKLFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           L ++ Q   A  +  EM +RDG+     +Y T I GL K G   EA+++F  +       
Sbjct: 394 LCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVP 453

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D  +   LI  L  + R+  A +L   +P   + P+ + YN +++ LC   ++  A D+ 
Sbjct: 454 DCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVL 513

Query: 511 LDMEENAAAPDVITFDMLIHGF 532
           ++M +N+  PD  TF  +  GF
Sbjct: 514 VEMMDNSCVPDGSTFRAMKLGF 535



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 168/387 (43%), Gaps = 69/387 (17%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DV +YN +I GLC A  ++ A  L  EM   G++ S VT  +I+  LC+ +++D+A    
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG------------------ 342
             +  R    +  +Y TL+ G    G+I+ A ELF  M S G                  
Sbjct: 63  HSVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKAH 121

Query: 343 ----------------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
                           C  D  ++ ++I G CK  ++  A  +++EM  KG KP ++ Y 
Sbjct: 122 RPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYT 181

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL--- 443
           +L  GL +   ++ A KL  E+   G+     TYT+FI GLCKNG + EA +L R +   
Sbjct: 182 SLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM 241

Query: 444 ---RILKC--------------------------ELDIQAYNCLIDGLCKSGRLKFAWEL 474
               +L C                           LD++ Y  LI GL    R   A E+
Sbjct: 242 CAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEM 301

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F ++     VP+  TY +++   C  G+M  A  +   M+      +   ++ L+ GF+ 
Sbjct: 302 FEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLG 361

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVS 561
           +N   +   +   M  K V P  SIV+
Sbjct: 362 VNRAREAINVYSTMLRKMVKP--SIVT 386



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D  SYNI+I G C       A  L +EM + GIK + VT+  +   L E  +V+ AL  F
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 406 DEMQ-RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             +  R  +  D  +YTT I GL  +G I  A ELF  +     +  + AY  +I+ L K
Sbjct: 63  HSVSPRSDL--DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALFK 119

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           + R   A   F  +      P++ T+ ++I GLC  G++++A ++F +M      PD+I 
Sbjct: 120 AHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIV 179

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +  L+ G  + +   +  +LL ++  + + P     +  +  L KN
Sbjct: 180 YTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKN 225



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELF----------CSLPHGVLVP-------------- 485
           LD+ +YN +I GLC +GR   A+EL             + HG+++               
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSY 61

Query: 486 ----------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
                     +VV+Y  +I GL + G++D A +LF +M  ++ +  V+ +  +I+   + 
Sbjct: 62  FHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEM-SSSGSQCVVAYTAIINALFKA 120

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           + P +      +M  +K  PD    ++V+  L K     ++   F    R+G
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKG 172


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 238/481 (49%), Gaps = 15/481 (3%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            + + G+ P++YTY ILI+ FCK G +      F  +     + N  T+ +L+       
Sbjct: 313 EMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAK 372

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV---- 201
           ++ +A+ +F ++   GC PN ITY+ L++GLC+ G    A  ++ ++   +  +G     
Sbjct: 373 QLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYF 432

Query: 202 ------VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                    PN VTY  +IDGLCK   V  A+ L   M      P+ + Y++LI G C  
Sbjct: 433 EGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKV 492

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
              + A+ +F+ M   G  P+V T+  ++D + K+R++D A ++L  MV+    PN  TY
Sbjct: 493 GKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTY 552

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             ++DG C +G+  +A +L   ME  GC  + V+Y  LI+G  K+ +V+ +L L+ +M +
Sbjct: 553 TAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST 612

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KG  P  VTY  L         ++ A  L  EM++       + Y + + G  K    I 
Sbjct: 613 KGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK--FIA 670

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---FCSLPHGVLVPNVVTYNI 492
           ++ L   L           Y  LID   K+GRL+ A EL      L   + + +   Y  
Sbjct: 671 SLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTS 730

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +IQ LC   Q++KA +L+ ++      P++  F  LI G I++N+ ++  +L + + ++ 
Sbjct: 731 LIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790

Query: 553 V 553
           V
Sbjct: 791 V 791



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/571 (26%), Positives = 267/571 (46%), Gaps = 72/571 (12%)

Query: 64  PPPVSSFNILLASLA-------------KNKHYDTRLNATGLFPNLYTYNILINCFCKIG 110
           PP   ++NI + S+                K Y+  L ++ +   + T N    C C +G
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTAN-FARCLCGMG 267

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           +  + F     ++   F P+ +T++ +I  L    ++ +A  LF ++K+ G  P+V TY 
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            LI+  C+ G    A + F+EM +      + C  N VTY+ ++    K   + +A  +F
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRS------IGCSANVVTYTALLHAYLKAKQLPQASDIF 381

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD----------------QGVQ 274
            +M D    P+ +TY++L+ GLC A +  +A  ++ +++                   + 
Sbjct: 382 NRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+VVT+  ++D LCK  K+ +A  LLD M+  G  PN   Y+ L+DGFC +GKI+ A+E+
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M   G      +Y  LI+   K++ ++ A+ +  +MV     P VVTY  +  GL  
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           I + + ALKL   M+  G + +  TYT  IDGL K+G +  +++LF  +    C  +   
Sbjct: 562 IGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVT 621

Query: 455 YNCLIDGLCKSGRLKFAWEL---------------FCSLPHGV----------------- 482
           Y  LI+  C +G L  A  L               +CS+  G                  
Sbjct: 622 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESH 681

Query: 483 -LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM---LIHGFIRINEP 538
             VP    Y ++I      G++++A +L  +M E +++ ++ + DM   LI      ++ 
Sbjct: 682 GTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQL 741

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            K  EL  ++  K V+P+ S+   ++  L+K
Sbjct: 742 EKAFELYSEITRKGVVPELSVFVCLIKGLIK 772



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 255/541 (47%), Gaps = 37/541 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           I + M++   +P P S FN L+ S    + Y        R+   G  P    YNI I   
Sbjct: 164 IINMMMKEGCNPNP-SLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSI 222

Query: 107 C------KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           C          ++L    +  +L S    N     +  + L    +   A  +   +   
Sbjct: 223 CGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK 282

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+  TY+ +I  LC       A  LF+EM +    +GV   P+  TY+ +ID  CK 
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS----VGV--NPDVYTYTILIDSFCKA 336

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A++ F +M+    + +VVTY +L+H    A    +A  +F  M+D G  P+ +T+
Sbjct: 337 GLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITY 396

Query: 281 NVIMDELCKNRKMDEASRLLDLMV----------------QRGVRPNACTYNTLMDGFCL 324
           + ++D LCK  ++ +A  +   ++                   + PN  TY  L+DG C 
Sbjct: 397 SALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCK 456

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K+  A+EL  +M S GC+ + + Y+ LI+G+CK  +++ A  ++  M   G  PTV T
Sbjct: 457 AHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHT 516

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   +F+  +++ A+K+  +M       +  TYT  IDGLC+ G   +A++L   + 
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 576

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  LIDGL KSG++  + +LF  +      PN VTY ++I   C  G +D
Sbjct: 577 EKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLD 636

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  L  +M++      +  +  ++ GF +    S    LL +++    +P A +  +++
Sbjct: 637 EAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASL--GLLEELESHGTVPIAPVYGLLI 694

Query: 565 D 565
           D
Sbjct: 695 D 695



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 253/586 (43%), Gaps = 72/586 (12%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  +++N L+  LA     D        ++ +G   + +T        CK GR S   + 
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALV- 96

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              I R  F  +      +I GL   S   EA +   +++   C PNV+TY TL+ G  +
Sbjct: 97  --MIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                  L   + + N   + G  C PN   +++++   C       A  L  +M D   
Sbjct: 155 KKQ----LGWCKRIINMMMKEG--CNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGC 208

Query: 239 NPDVVTYNSLIHGLCHANDWNE------AKRLFIEM------------------------ 268
            P  V YN  I  +C   +         A++++ EM                        
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 268

Query: 269 -----------MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
                      M +G  P   T++ ++  LC+  K+++A  L   M   GV P+  TY  
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+D FC  G I +A   F  M S+GC  + V+Y  L++ Y K K++ +A  ++  M+  G
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEM----------------QRDGVAADTRTYT 421
             P  +TY+ L  GL +  +++ A +++ ++                  D +A +  TY 
Sbjct: 389 CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYG 448

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             IDGLCK   +++A EL   +    CE +   Y+ LIDG CK G++  A E+F  +   
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKC 508

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
             +P V TY  +I  +  D ++D A  +   M E++  P+V+T+  +I G  RI E  K 
Sbjct: 509 GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +LL  M+EK   P+    + ++D L K+     SL  F+    +G
Sbjct: 569 LKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 198/471 (42%), Gaps = 66/471 (14%)

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           +LK FG  P+  TYN L+  L   G   +   + +EM+    E G      TV       
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS----ESGFCMDKFTV--GCFAQ 83

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            LCKEG    A    + ++ E+   D V    +I GL  A+ ++EA      M      P
Sbjct: 84  ALCKEGRWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIP 140

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VVT+  ++    K +++    R++++M++ G  PN   +N+L+  +C       A +L 
Sbjct: 141 NVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 200

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEV-------------EE----------------- 365
             M   GC    V+YNI I   C  +E+             EE                 
Sbjct: 201 KRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 260

Query: 366 -----------ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
                      A  + + M+ KG  P   TY+ +   L E  +VE A  LF EM+  GV 
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TYT  ID  CK G I +A   F  +R + C  ++  Y  L+    K+ +L  A ++
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM----------------EENAA 518
           F  +      PN +TY+ ++ GLC  G++ KA +++  +                  ++ 
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           AP+V+T+  LI G  + ++     ELL  M      P+  I   ++D   K
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCK 491



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 171/358 (47%), Gaps = 17/358 (4%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K +K  D +     + + G  PN   Y+ LI+ FCK+G++      
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+ +  + P   T+ SLI  +  + R+  A  + +++    C PNV+TY  +I+GLCR
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    AL L   M          C PN VTY+ +IDGL K G VD +  LF+QM  +  
Sbjct: 562 IGECQKALKLLSMMEEKG------CSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGC 615

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ VTY  LI+  C A   +EA  L  EM        +  +  ++     ++K   +  
Sbjct: 616 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLG 673

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS---YNILIN 355
           LL+ +   G  P A  Y  L+D F   G++  A EL   M  +    +  S   Y  LI 
Sbjct: 674 LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQ 733

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
             C   ++E+A  LY E+  KG+ P +  +  L  GL ++++   AL+L   +  +GV
Sbjct: 734 ALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/398 (33%), Positives = 209/398 (52%), Gaps = 17/398 (4%)

Query: 53  IFDYMLRMHPS----PPPVSSFNILLASLAKNK--------HYDTRLNATGLFPNLYTYN 100
           +FD +LR           + S N  LA++A++         +   R +   + P L+TY 
Sbjct: 43  VFDELLRQGRGGGGGASIIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYG 102

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKA 159
           ILI C C+ GR+ LGF   G +++  +      F  L+K L AE R   A  +   ++  
Sbjct: 103 ILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTE 162

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            GC P+V +YN L+ GLC    +  AL L   MA+  G+    C P+ V+YSTIIDGL K
Sbjct: 163 LGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGD----CPPDVVSYSTIIDGLFK 218

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           EG  DKA + + +M +  I PDVVTYN+++  LC A   ++A  +   M+  GV P  +T
Sbjct: 219 EGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCIT 278

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N I+   C + +  EA  +L+ M   GV P+A TY +LMD  C  G+   A ++  SM 
Sbjct: 279 YNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMI 338

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G K + ++Y+ L++GY     + E   L   MV  GI+P    ++ L     +   V+
Sbjct: 339 KRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVD 398

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
            A+ +F +M++  +  D  TY T IDGLCK+G + +A+
Sbjct: 399 VAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 22/388 (5%)

Query: 131 AATFNSLIKGLHAESRIMEAAAL-----FTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           A+   SL + L A +R   AAA+       +       P + TY  LI   CR G     
Sbjct: 58  ASIIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGR---- 113

Query: 186 LNLFEEMANGNGEIGVVCKPN----TVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINP 240
           L+L      G   +G V K       + ++ ++  LC E     A  + L+ M +    P
Sbjct: 114 LDL------GFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAP 167

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASR 298
            V +YN L+ GLCH +   EA  L   M D G    P VV+++ I+D L K    D+A  
Sbjct: 168 HVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYS 227

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M++RG+ P+  TYNT++   C    +++A ++   M   G   D ++YN +++GYC
Sbjct: 228 TYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYC 287

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            + + +EA+ +  +M S G++P  VTY +L   L +  +   A K+ D M + G+  +  
Sbjct: 288 SSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVI 347

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY+T + G    G ++E  +L   +     + D   ++ LI    K   +  A  +F  +
Sbjct: 348 TYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKM 407

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               L P+VVTY  +I GLC  G++D A
Sbjct: 408 RQQRLTPDVVTYGTLIDGLCKSGRVDDA 435



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 162/339 (47%), Gaps = 3/339 (0%)

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           D  + P + TY  LI   C A   +        ++ +G +   + F  ++  LC  ++  
Sbjct: 91  DGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTS 150

Query: 295 EASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYN 351
            A  + L  M + G  P+  +YN L+ G C   +   A EL   M   G  C  D VSY+
Sbjct: 151 NAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYS 210

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I+G  K  + ++A S Y EM+ +GI P VVTYNT+   L +   ++ A+ + + M ++
Sbjct: 211 TIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN 270

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  D  TY + + G C +G   EA+ +   +     E D   Y  L+D LCK+GR   A
Sbjct: 271 GVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEA 330

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++  S+    L PNV+TY+ ++ G    G + + RDL   M  N   PD   F +LI  
Sbjct: 331 RKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICA 390

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +         +  KM+++++ PD      ++D L K+
Sbjct: 391 CTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKS 429



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 3/305 (0%)

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D  V P++ T+ +++   C+  ++D     L  ++++G R     +  L+   C   + +
Sbjct: 91  DGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTS 150

Query: 330 RAEEL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYN 386
            A  +    M  +GC     SYNIL+ G C     +EAL L   M   G    P VV+Y+
Sbjct: 151 NAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYS 210

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GLF+    + A   + EM   G+  D  TY T +  LCK   + +A+++   +   
Sbjct: 211 TIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN 270

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D   YN ++ G C SG+ K A  +   +    + P+ VTY  ++  LC +G+  +A
Sbjct: 271 GVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEA 330

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           R +   M +    P+VIT+  L+HG+       ++ +LL  M    + PD  + SI++  
Sbjct: 331 RKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICA 390

Query: 567 LVKNE 571
             K++
Sbjct: 391 CTKHQ 395



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 401 ALKLFDEMQR--DGVAADT-RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           A+  F+ M R  DG    T  TY   I   C+ G +         +      ++   +  
Sbjct: 79  AVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTP 138

Query: 458 LIDGLCKSGR--------LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           L+  LC   R        L+   EL C+       P+V +YNI+++GLC++ +  +A +L
Sbjct: 139 LLKSLCAEKRTSNAMNIVLRRMTELGCA-------PHVFSYNILLKGLCHESRSQEALEL 191

Query: 510 FLDMEENAA--APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
              M ++     PDV+++  +I G  +  +  K     H+M E+ ++PD    + +V  L
Sbjct: 192 LHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAAL 251

Query: 568 VKNEISLKSL 577
            K +   K++
Sbjct: 252 CKAQAMDKAM 261


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 268/548 (48%), Gaps = 41/548 (7%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           P++A  +F  M  +    P + S+N LL +  + K +             G+ PNL TYN
Sbjct: 94  PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153

Query: 101 ILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +LI   CK      + GF+ +  + +  F P+  +++++I  L    ++ +A  LF ++ 
Sbjct: 154 VLIKMSCKKKEFEKARGFLDW--MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEE----------------MANGNGEIGVV 202
             G  P+V  YN LI+G  +      A+ L++                 M +G  + G V
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271

Query: 203 --C------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             C            + +  TYS++I GLC  G VDKA+++F ++ +   + DVVTYN++
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           + G C      E+  L+  +M+     ++V++N+++  L +N K+DEA+ +  LM  +G 
Sbjct: 332 LGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
             +  TY   + G C+ G +N+A  +   +ES G   D  +Y  +I+  CK K +EEA +
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L +EM   G++      N L  GL    ++  A     EM ++G      +Y   I GLC
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G   EA    + +     + D++ Y+ L+ GLC+  ++  A EL+       L  +V+
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            +NI+I GLC+ G++D A  +  +ME      +++T++ L+ GF ++ + ++   +   M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630

Query: 549 KEKKVMPD 556
            +  + PD
Sbjct: 631 YKMGLQPD 638



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 232/487 (47%), Gaps = 36/487 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYN 100
           ++A  +FD M       P V+ +NIL+    K K        +D  L  + ++PN+ T+N
Sbjct: 201 DDALELFDEMSE-RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           I+I+   K GRV      + R+ ++    +  T++SLI GL     + +A ++F +L   
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG--------------------EIG 200
               +V+TYNT++ G CR G    +L L+  M + N                     E  
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379

Query: 201 VVCK--------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           ++ +         +  TY   I GLC  G+V+KA  +  +++    + DV  Y S+I  L
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      EA  L  EM   GV+ +    N ++  L ++ ++ EAS  L  M + G RP  
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            +YN L+ G C  GK   A      M   G K D  +Y+IL+ G C++++++ AL L+ +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
            +  G++  V+ +N L  GL  + +++ A+ +   M+     A+  TY T ++G  K G 
Sbjct: 560 FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGD 619

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
              A  ++  +  +  + DI +YN ++ GLC    + +A E F    +  + P V T+NI
Sbjct: 620 SNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNI 679

Query: 493 MIQGLCN 499
           +++ + N
Sbjct: 680 LVRAVVN 686



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 226/446 (50%), Gaps = 10/446 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P + +   ++K L +E     A ALF +  +  G   + + Y+ ++  L  T        
Sbjct: 5   PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYN 246
           + E + +        CK +     ++I    K    D+A  +F +M++     P + +YN
Sbjct: 65  IVELIRSQE------CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +L++    A  W + + LF      GV P++ T+NV++   CK ++ ++A   LD M + 
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE 178

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G +P+  +Y+T+++     GK++ A ELF  M   G   D   YNILI+G+ K K+ + A
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238

Query: 367 LSLY-REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           + L+ R +    + P V T+N +  GL +  +V+  LK+++ M+++    D  TY++ I 
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC  G + +A  +F  L   K  +D+  YN ++ G C+ G++K + EL+  + H   V 
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV- 357

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           N+V+YNI+I+GL  +G++D+A  ++  M     A D  T+ + IHG       +K   ++
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNE 571
            +++      D    + ++D L K +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKK 443



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 147/286 (51%), Gaps = 2/286 (0%)

Query: 289 KNRKMDEASRLLDLMVQ-RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           KN   D+A  +   M +  G  P   +YNTL++ F    +  + E LF   E+ G   + 
Sbjct: 90  KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNL 149

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            +YN+LI   CK KE E+A      M  +G KP V +Y+T+   L +  +++ AL+LFDE
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGLCKSG 466
           M   GVA D   Y   IDG  K      A+EL+ R L       +++ +N +I GL K G
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           R+    +++  +       ++ TY+ +I GLC+ G +DKA  +F +++E  A+ DV+T++
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            ++ GF R  +  +  EL   M+ K  +   S   ++  LL   +I
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKI 375


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 231/462 (50%), Gaps = 28/462 (6%)

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
            CK G++      F  +      P+  ++  ++ G   +  +++   LF  +   G  P+
Sbjct: 4   LCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 63

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           + T+N LI      G    A+ +F EM +         KP+ VTY T+I  LC+ G +D 
Sbjct: 64  IYTFNVLIKAYANCGMLDKAMIIFNEMRDHG------VKPHVVTYMTVIAALCRIGKMDD 117

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A   F QM D+ + PD   Y+ LI G C      +AK L  E+M+ G++  +V F  I++
Sbjct: 118 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 177

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LCK  ++ +A  + DL V  G+ P+A  YN LMDG+CL+GK+ +A  +F +M S G + 
Sbjct: 178 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 237

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           + V                       EM+ KGIKP+ + YN +  GLFE  +   A   F
Sbjct: 238 NVVG----------------------EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 275

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM   G+A +  TY+  + GL KN    EA+ LF+ LR +  ++DI   N +I G+ ++
Sbjct: 276 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 335

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            R++ A +LF S+    LVP  VTY+IMI  L  +G +++A D+F  M+     PD    
Sbjct: 336 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 395

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           + ++   ++ NE  +    L K+ E+    +     ++VDL 
Sbjct: 396 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 437



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 193/397 (48%), Gaps = 28/397 (7%)

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           +  LC+ G      ++F+ MA   G+      P+  +Y+ +++G   +G +     LF  
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAM-KGQ-----NPDVFSYTIMLNGYATKGCLVDMTDLFDL 54

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M  + I PD+ T+N LI    +    ++A  +F EM D GV+P VVT+  ++  LC+  K
Sbjct: 55  MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 114

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           MD+A    + M+ +GV P+   Y+ L+ GFC  G + +A+EL   + + G + D V +  
Sbjct: 115 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 174

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +IN  CK   V +A +++   V+ G+ P  V YN L  G   + ++E AL++FD M   G
Sbjct: 175 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 234

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +       +  + + G         +   IL        YN +IDGL ++GR   A 
Sbjct: 235 IEPNV------VGEMLQKG--------IKPSTIL--------YNIIIDGLFEAGRTVPAK 272

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             F  +    +  N  TY+I+++GL  +   D+A  LF ++       D+IT + +I G 
Sbjct: 273 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 332

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +     +  +L   +    ++P A   SI++  L+K
Sbjct: 333 FQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 369



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 183/407 (44%), Gaps = 26/407 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           +FD ML      P + +FN+L+ + A     D        +   G+ P++ TY  +I   
Sbjct: 51  LFDLMLG-DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAAL 109

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           C+IG++      F +++     P+   ++ LI+G      +++A  L +++   G   ++
Sbjct: 110 CRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 169

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           + + ++IN LC+ G  M A N+F+   N      V   P+ V Y+ ++DG C  G ++KA
Sbjct: 170 VFFGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDAVVYNMLMDGYCLVGKMEKA 223

Query: 227 KALFLQMKDENINPDVV-------------TYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
             +F  M    I P+VV              YN +I GL  A     AK  F EM + G+
Sbjct: 224 LRVFDAMVSAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 283

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             +  T+++++  L KNR  DEA  L   +    V+ +  T NT++ G     ++  A++
Sbjct: 284 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 343

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           LF S+   G     V+Y+I+I    K   VEEA  ++  M + G +P     N +   L 
Sbjct: 344 LFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 403

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           + +++  A     ++     + +  T    +D     G   E +   
Sbjct: 404 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 450



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 147/303 (48%), Gaps = 17/303 (5%)

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           M  LCK  K+ E   + D M  +G  P+  +Y  +++G+   G +    +LF  M   G 
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 60

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D  ++N+LI  Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A++
Sbjct: 61  APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 120

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
            F++M   GV  D   Y   I G C +G +++A EL   +      LDI  +  +I+ LC
Sbjct: 121 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 180

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF------------- 510
           K GR+  A  +F    +  L P+ V YN+++ G C  G+M+KA  +F             
Sbjct: 181 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 240

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINE--PSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
            +M +    P  I ++++I G        P+KV    H+M E  +  +    SIV+  L 
Sbjct: 241 GEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK--FHEMTESGIAMNKCTYSIVLRGLF 298

Query: 569 KNE 571
           KN 
Sbjct: 299 KNR 301


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 243/464 (52%), Gaps = 21/464 (4%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           +H  P P +++ +   +  ++K    R          +T N L++ + K  RV    + F
Sbjct: 76  IHRIPDPNTAWEVFQWAGKQSKFTHNR----------FTCNNLLSVYVKARRVEDAHLFF 125

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
              +++ F P+  ++N+L+ G      + +A ALF ++K  G    + ++N ++ GLC  
Sbjct: 126 QSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSG 184

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G   +A  +F++M+        +  PN ++Y+ +IDGLCK   VDKA  LF QM D+ I 
Sbjct: 185 GKISMAWEVFKDMSG-------IFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIY 237

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PDVVTY +LI GL       EA  LF E   +G  P+VVT+N ++D LCK  +++ A  L
Sbjct: 238 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 297

Query: 300 LDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            D MV+   ++P+  TY+ L++G  L  +  +A EL+  M   GC  D V+YN L++G C
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLC 357

Query: 359 KNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           K+   ++A+ ++R+M V     P V+TY  L     ++ ++  A+KL  EM+   +  D 
Sbjct: 358 KSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDA 417

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+TT I  LCK   I EA ELF ++    C+ D   +N ++ G CK  R+  A +L   
Sbjct: 418 VTFTTVIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDR 476

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           +      P + TY  ++ G C  G+   A  ++ +M E    P+
Sbjct: 477 MLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 228/443 (51%), Gaps = 13/443 (2%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHT 182
           +S FT N  T N+L+  ++ ++R +E A LF +       EP+ ++YNTL+NG  + G  
Sbjct: 95  QSKFTHNRFTCNNLL-SVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDV 153

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL LF EM +    I V+      +++ ++ GLC  G +  A  +F  M     +P++
Sbjct: 154 KKALALFGEMKDSG--IAVL-----RSHNIVLRGLCSGGKISMAWEVFKDMSG-IFSPNL 205

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           ++Y  +I GLC +   ++A  LF +M+D+ + P VVT+  ++D L K R++ EA  L + 
Sbjct: 206 ISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE 265

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNK 361
              +G  P   TYNT++DG C  G+I  A  L+  M      K D  +Y+ LING   + 
Sbjct: 266 ARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSN 325

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA-ADTRTY 420
             E+A  LY EM+  G  P VVTYNTL  GL +    + A+++F +M    V   +  TY
Sbjct: 326 RGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITY 385

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  ID  CK   + +AV+L + +       D   +  +I  LCK  R+  A ELF S+  
Sbjct: 386 TVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGK 445

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
               P+ V +N M+ G C   ++D A+ L   M ++  AP + T+  L+ GF R    S 
Sbjct: 446 -TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSD 504

Query: 541 VNELLHKMKEKKVMPDASIVSIV 563
              + H+M E    P+  +  +V
Sbjct: 505 ALIMYHEMIEMGFPPERHLAELV 527



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 209/366 (57%), Gaps = 7/366 (1%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           V +P+ V+Y+T+++G  K G V KA ALF +MKD  I   + ++N ++ GLC     + A
Sbjct: 132 VFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMA 190

Query: 262 KRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
             +F +M   G+  P+++++ +++D LCK+RK+D+A  L   MV + + P+  TY  L+D
Sbjct: 191 WEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IK 379
           G     ++  A +LF    + GC    V+YN +I+G CK   +E AL+LY +MV +  +K
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P + TY+ L  GL   ++ E A +L++EM   G + D  TY T +DGLCK+G   +A+E+
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368

Query: 440 FRTLRILK-CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           FR + +   C+ ++  Y  LID  CK  RL  A +L   +    L+P+ VT+  +IQ LC
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            + ++D+A +LF  + +    PD + F+ ++ G+ +I       +L  +M +    P  +
Sbjct: 429 KESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLA 487

Query: 559 IVSIVV 564
             + +V
Sbjct: 488 TYTALV 493



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 177/328 (53%), Gaps = 4/328 (1%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T N+L+     A    +A   F   M    +P  V++N +M+   K   + +A  L   M
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G+     ++N ++ G C  GKI+ A E+F  M  +    + +SY I+I+G CK+++V
Sbjct: 164 KDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKV 221

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A++L+++MV K I P VVTY  L  GL +  +V+ A  LF+E +  G      TY T 
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 281

Query: 424 IDGLCKNGYIIEAVELFRTL-RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           IDGLCK G I  A+ L+  + R    + D+  Y+ LI+GL  S R + A+EL+  +    
Sbjct: 282 IDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAPDVITFDMLIHGFIRINEPSKV 541
             P+VVTYN ++ GLC  G  DKA ++F  M   N   P+VIT+ +LI  F +++     
Sbjct: 342 CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDA 401

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +L  +M+ + ++PDA   + V+  L K
Sbjct: 402 VKLAKEMEGRSLLPDAVTFTTVIQKLCK 429



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 5/272 (1%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  T N L+  +    ++  A   F S      + D+VSYN L+NG+ K  +V++AL+L+
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV-AADTRTYTTFIDGLCK 429
            EM   GI   + ++N +  GL    ++  A ++F +M   G+ + +  +YT  IDGLCK
Sbjct: 161 GEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDMS--GIFSPNLISYTIMIDGLCK 217

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +  + +A+ LF+ +       D+  Y  LIDGL K  R+K A++LF         P VVT
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVT 277

Query: 490 YNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           YN MI GLC  G+++ A  L+ DM  E    PD+ T+  LI+G    N   K  EL  +M
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            +    PD    + ++D L K+    K++  F
Sbjct: 338 LDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIF 369


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 234/461 (50%), Gaps = 22/461 (4%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           K +D         PN  +Y+ILI+  C++GR+   F    ++      P+  T+  LIK 
Sbjct: 251 KVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L     I +A  LF ++   GC+PNV TY  LI+GLCR G          E ANG     
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI--------EEANG----- 357

Query: 201 VVCK--------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
            VC+        P+ +TY+ +I+G CK+G V  A  L   M+     P+V T+N L+ GL
Sbjct: 358 -VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      +A  L   M+D G+ P +V++NV++D LC+   M+ A +LL  M    + P+ 
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            T+  +++ FC  GK + A    G M   G   D+V+   LI+G CK  +  +AL +   
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           +V   I  T  + N +   L +  +V+  L +  ++ + G+     TYTT +DGL ++G 
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           I  +  +   +++  C  ++  Y  +I+GLC+ GR++ A +L  ++    + PN VTY +
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           M++G  N+G++D+A +    M E     +   +  L+ GF+
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 250/508 (49%), Gaps = 13/508 (2%)

Query: 70  FNILLASLAKNK----HYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           ++ LL SLAK       Y T  R+ A G    +  Y  ++N  CK G      +   +IL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHT 182
           +  F  ++    SL+ G      + +A  +F  + K   C PN ++Y+ LI+GLC  G  
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  L ++M    GE G  C+P+T TY+ +I  LC  G +DKA  LF +M      P+V
Sbjct: 283 EEAFGLKDQM----GEKG--CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY  LI GLC      EA  +  +M+   + PSV+T+N +++  CK+ ++  A  LL +
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +R  +PN  T+N LM+G C +GK  +A  L   M   G   D VSYN+LI+G C+   
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  A  L   M    I+P  +T+  +     +  + + A      M R G++ D  T TT
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDG+CK G   +A+ +  TL  ++      + N ++D L K  ++K    +   +    
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           LVP+VVTY  ++ GL   G +  +  +   M+ +   P+V  + ++I+G  +     +  
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +LL  M++  V P+    +++V   V N
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNN 664



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 215/479 (44%), Gaps = 42/479 (8%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F  N   ++SL+  L        A   + +++A G    +I Y T++N LC+ G+T  A 
Sbjct: 156 FRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE 215

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-GFVDKAKALFLQMKDENINPDVVTY 245
               ++     +IG V   +  T  +++ G C+     D  K   +  K+    P+ V+Y
Sbjct: 216 MFMSKIL----KIGFVLDSHIGT--SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           + LIHGLC      EA  L  +M ++G QPS  T+ V++  LC    +D+A  L D M+ 
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RG +PN  TY  L+DG C  GKI  A  +   M         ++YN LINGYCK+  V  
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A  L   M  +  KP V T+N L  GL  + +   A+ L   M  +G++ D  +Y   ID
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC+ G++  A +L  ++     E D   +  +I+  CK G+   A      +    +  
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509

Query: 486 NVVTYNIMIQGLCNDGQMDKA------------------RDLFLDM--------EENAA- 518
           + VT   +I G+C  G+   A                   ++ LDM        EE A  
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569

Query: 519 --------APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                    P V+T+  L+ G IR  + +    +L  MK    +P+    +I+++ L +
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 187/454 (41%), Gaps = 95/454 (20%)

Query: 65  PPVSSFNILLASLA------KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +FN L+  L       K  H   R+   GL P++ +YN+LI+  C+ G ++  +  
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463

Query: 119 FGRILRSCF--TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
              +  +CF   P+  TF ++I     + +   A+A    +   G   + +T  TLI+G+
Sbjct: 464 LSSM--NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 177 CRTGHTMIALNLFE-------------------------------EMANGNGEIGVVCKP 205
           C+ G T  AL + E                                M     ++G+V  P
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV--P 579

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+T++DGL + G +  +  +   MK     P+V  Y  +I+GLC      EA++L 
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M D GV P+ VT+ V++     N K+D A   +  MV+RG   N   Y++L+ GF L 
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699

Query: 326 GK-INRAEE------------------LFGSMESMG--------------CKH------D 346
            K I+ +EE                  L   +E +G              CK       +
Sbjct: 700 QKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESN 759

Query: 347 DVSYNILING-------------YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           D+  N+L  G             YC  K+  + + L   ++  G  P+  ++  +  GL 
Sbjct: 760 DLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLK 819

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +    E A +L  E+       +     T+++ L
Sbjct: 820 KEGDAERARELVMELLTSNGVVEKSGVLTYVECL 853



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 40/241 (16%)

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y++L + L ++     A   +  M+ DG       Y T ++ LCKNGY  EA E+F + +
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEAAEMFMS-K 220

Query: 445 ILK--------------------------------------CELDIQAYNCLIDGLCKSG 466
           ILK                                      C  +  +Y+ LI GLC+ G
Sbjct: 221 ILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVG 280

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           RL+ A+ L   +      P+  TY ++I+ LC+ G +DKA +LF +M      P+V T+ 
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYT 340

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           +LI G  R  +  + N +  KM + ++ P     + +++   K+   + +     V E++
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400

Query: 587 G 587
            
Sbjct: 401 A 401


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 222/439 (50%), Gaps = 9/439 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKL--KAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           P+  T+N+L+     E R  + A L  ++  +  GC PN +TYN +I GL R G    A 
Sbjct: 202 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 261

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L E M           K ++ TY+ +I GL   G V K   L L+M++E I P VVTYN
Sbjct: 262 ELVEGMRLSK-------KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 314

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           ++IHGL  +     A+  F EM   G+ P V+T+N +++  CK   + EA  L   + + 
Sbjct: 315 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 374

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ P   TYN  +DG+C +G +  A  L   M   GC  +  +Y IL+ G      +  A
Sbjct: 375 GLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMA 434

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
              + EM+SKG++P    YNT       +  +  AL+L + +  +G+++DT TY   I G
Sbjct: 435 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHG 494

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G + +A EL   +     + D   Y CLI   C+ G L+ A ++F ++    L+P+
Sbjct: 495 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPS 554

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            VT+ ++I   C  G +  A   F  M E    P+ IT+++LIH   R+      +   H
Sbjct: 555 AVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 614

Query: 547 KMKEKKVMPDASIVSIVVD 565
           +M E+ ++ +    ++++D
Sbjct: 615 EMLERGLVANKYTYTLLID 633



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/516 (31%), Positives = 242/516 (46%), Gaps = 52/516 (10%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR--- 111
           H   P V   N +L +L     +D        +   G+ P++ TYN L++ F K GR   
Sbjct: 163 HGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDK 222

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V++           C  PN  T+N +I GL  +  + EAA L   ++    + +  TYN 
Sbjct: 223 VAMLLKEMETRGSGCL-PNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNP 280

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI GL   G      +L  EM N     G++  P  VTY+ +I GL + G V+ A+  F 
Sbjct: 281 LITGLLARGCVKKVYDLQLEMENE----GIM--PTVVTYNAMIHGLLQSGLVEAAQVKFA 334

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M+   + PDV+TYNSL++G C A +  EA  LF ++   G+ P+V+T+N+ +D  C+  
Sbjct: 335 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDG------------------------------ 321
            ++EA  L + M ++G  PN CTY  LM G                              
Sbjct: 395 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYN 454

Query: 322 --FC---LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
              C   ++G I RA EL   +   G   D V+YNILI+G CK   +++A  L  +MVS 
Sbjct: 455 TRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSN 514

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G++P  +TY  L     E   +  A K+F+ M  DG+     T+T  I   C+ G +  A
Sbjct: 515 GLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSA 574

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
              FR +     E +   YN LI  LC+ GR + A   F  +    LV N  TY ++I G
Sbjct: 575 YGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 634

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            C  G  + A   + +M +N   PD +T   L+ GF
Sbjct: 635 NCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 224/458 (48%), Gaps = 7/458 (1%)

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
           +L   AF  +      P+    N +++ L   +R  +  A+  ++   G EP+++TYNTL
Sbjct: 151 TLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTL 210

Query: 173 INGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           ++   + G       L +EM   G+G     C PN VTY+ +I GL ++G +++A  L  
Sbjct: 211 LDSFLKEGRKDKVAMLLKEMETRGSG-----CLPNDVTYNVVITGLTRKGDLEEAAELVE 265

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M+         TYN LI GL       +   L +EM ++G+ P+VVT+N ++  L ++ 
Sbjct: 266 GMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSG 324

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            ++ A      M   G+ P+  TYN+L++G+C  G +  A  LFG +   G     ++YN
Sbjct: 325 LVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYN 384

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           I I+GYC+  ++EEA  L  EM  +G  P V TY  L  G   +  +  A + FDEM   
Sbjct: 385 IRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK 444

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+  D   Y T I      G I  A+EL   L +     D   YN LI GLCK+G LK A
Sbjct: 445 GLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 504

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            EL   +    L P+ +TY  +I   C  G + +AR +F +M  +   P  +TF ++IH 
Sbjct: 505 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 564

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + R            KM E+ V P+    ++++  L +
Sbjct: 565 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 602


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 237/493 (48%), Gaps = 11/493 (2%)

Query: 69  SFNILLASLAKNKHYDTRL----NATGLFP-NLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           + N LLA L +N   D          G+   ++  +N LI  +C++G          R+ 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                 +   +N+L+ G     ++  A  +   +K  G +PNV TY   I   CRT    
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A +L+E M       GV+   + VT S ++ GLC++G   +A ALF +M      P+ V
Sbjct: 257 EAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY +LI  L  A    E   L  EM+ +GV   +VT+  +MD L K  K DE    L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +   + PN  TY  L+D  C    ++ AE++   ME      + V+++ +ING+ K   +
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A    R M  +GI P VVTY TL  G F+    + AL+++ +M  +GV  +     + 
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ++GL +NG I EA+ LF+        LD   Y  LIDGL K+G +  A++    L    +
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+ V YN+ I  LC  G+  +A+    +M      PD  T++ +I    R  E +K  +
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 544 LLHKMKEKKVMPD 556
           LLH+MK   + P+
Sbjct: 611 LLHEMKMSSIKPN 623



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 236/467 (50%), Gaps = 12/467 (2%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  V  +N L+A   +    D        +   G+ PN+ TY   I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  ++R+    +  T ++L+ GL  + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K        +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P+ VTY  LI  LC A++ +EA+++ +EM ++ + P+VVTF+ +++   K   +D+A+
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
               +M +RG+ PN  TY TL+DGF      + A E++  M   G K +    + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            +N ++EEA++L+++    G+    V Y TL  GLF+   +  A K   E+    +  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y  FI+ LC  G   EA      +R +  + D   YN +I   C+ G    A +L   
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +    + PN++TYN ++ GL   G ++KA+ L  +M     +P  +T
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 238/499 (47%), Gaps = 12/499 (2%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY +LI+  CK   V         +     +PN  TF+S+I G      + +A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC---KPNTV 208
                +K  G  PNV+TY TLI+G  +      AL ++ +M         +C   K N  
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM---------LCEGVKVNKF 485

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
              ++++GL + G +++A ALF       ++ D V Y +LI GL  A D   A +   E+
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           MD+ + P  V +NV ++ LC   K  EA   L  M   G++P+  TYNT++   C  G+ 
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A +L   M+    K + ++YN L+ G      VE+A  L  EMVS G  P+ +T+  +
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                +  +++  L + + M   G+ AD   Y T +  LC +G   +A  +   +     
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D   +N LI G CKS  L  A+  +  + H  + PN+ T+N ++ GL + G++ +A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           + ++ME++   P+ +T+D+L  G  + +   +   L  +M  K  +P  S  + ++    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 569 KNEISLKSLPSFLVQERQG 587
           K  +  ++   F   +++G
Sbjct: 846 KAGMMTQAKELFKDMQKRG 864



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 212/471 (45%), Gaps = 43/471 (9%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L K   Y   +   G+ PN+ TY  LI+ F K          +  +L      N    +S
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ GL    +I EA ALF      G   + + Y TLI+GL + G    A    +E+ + N
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 197 GE---------IGVVC--------------------KPNTVTYSTIIDGLCKEGFVDKAK 227
                      I  +C                    KP+  TY+T+I   C++G   KA 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  +MK  +I P+++TYN+L+ GL       +AK L  EM+  G  PS +T   ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            ++R++D    + + M+  G+  +   YNTL+   C  G   +A  +   M   G   D 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           +++N LI G+CK+  ++ A + Y +M+ + I P + T+NTL  GL  + ++  A  +  E
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-------DIQAYNCLID 460
           M++ G+  +  TY     G  K    +EA+ L+       CE+        +  YN LI 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGFVPKVSTYNALIS 842

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              K+G +  A ELF  +    + P   TY+I++ G  +  +  K+++ + 
Sbjct: 843 DFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYF 893



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 229/517 (44%), Gaps = 39/517 (7%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           + N L+   C++ R+    IA  R  R    P    +N L+  L   +    A A+  ++
Sbjct: 75  SLNALLYSHCRL-RLLRPAIALLRSSR----PTTVAYNILLAALSDHA---HAPAVLAEM 126

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFE--------EMANGNGEIGVVCKP---- 205
              G   + +T NTL+ GLCR G    A  L +        ++   N  I   C+     
Sbjct: 127 CKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTP 186

Query: 206 ----------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
                           + V Y+T++ G C+ G VD A+ +   MK+  ++P+V TY   I
Sbjct: 187 AALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFI 246

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
              C      EA  L+  M+  GV   VVT + ++  LC++ +  EA  L   M + G  
Sbjct: 247 VYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAA 306

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TY TL+D     G+      L G M S G   D V+Y  L++   K  + +E    
Sbjct: 307 PNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDT 366

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
            R  +S  + P  VTY  L   L + H V+ A ++  EM+   ++ +  T+++ I+G  K
Sbjct: 367 LRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK 426

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVV 488
            G + +A E  R ++      ++  Y  LIDG  K      A E++   L  GV V N  
Sbjct: 427 RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV-NKF 485

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             + ++ GL  +G++++A  LF D   +  + D + +  LI G  +  +     +   ++
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
            ++ ++PDA + ++ ++ L       K   SFL + R
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLG-KFKEAKSFLTEMR 581



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 41/320 (12%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           +L    + K + T +   GL P+  TYN +I   C+ G  +        +  S   PN  
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT------------------------ 168
           T+N+L+ GL     + +A  L  ++ + G  P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 169 -----------YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
                      YNTL+  LC  G T  A  + EEM      +G    P+T+T++ +I G 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGIAPDTITFNALILGH 739

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK   +D A A + QM  +NI+P++ T+N+L+ GL       EA  + IEM   G++P+ 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +T++++     K     EA RL   MV +G  P   TYN L+  F   G + +A+ELF  
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 338 MESMGCKHDDVSYNILINGY 357
           M+  G      +Y+IL++G+
Sbjct: 860 MQKRGVHPTSCTYDILVSGW 879


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 237/500 (47%), Gaps = 39/500 (7%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCF-TP-----------NAATFNSLIKG 140
           PN YTY  ++   C  G ++        + LR C  TP               F S ++ 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 141 L---HAESRIM-------------------EAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           L   HA+   +                   E   L  KL +FGCEP++++YN ++ GLC 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 179 TGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
                    L  EM   +  +  +    C P+   Y+TIIDG+CK+G  + A  +  +M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
              + P+VV YN+++ GLC A  W EA+ L  EM  +      VTFN+++D  C+N  +D
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
               LL+ M++ G  P+  TY T+++GFC  G ++ A  L  +M + GCK + +SY I++
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G C+ +   +A  L   M+ +G  P  VT+NTL   + +    E A++L  +M  +G +
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  +Y+T IDGL K G   EA+EL   +       +   Y+ +   L + GR     ++
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F S+    +  +   YN +I  LC   + D+A D F  M  N   P+  T+ +LI G   
Sbjct: 526 FDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLAS 585

Query: 535 INEPSKVNELLHKMKEKKVM 554
                +  +LL ++  ++ +
Sbjct: 586 EGLVREAQDLLSELCSRRAV 605



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 238/507 (46%), Gaps = 21/507 (4%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           L +  +       L+  G    +  YN +I  +C+ G+V+        +      PNA T
Sbjct: 54  LCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYT 110

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM- 192
           +  +++ L A   I +A  +  ++   GC       + ++   CR G    A+   + + 
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
           A G       C  ++   + ++  +C++G VD+   L  ++      PD+V+YN+++ GL
Sbjct: 171 AKG-------CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 253 CHANDWNEAKRLFIEMM----------DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           C A  W++ + L +EM+          + G  P +  +  I+D +CK+   + A+ +L  
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G++PN   YNT++ G C   +   AE+L   M    C  DDV++NIL++ +C+N  
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           V+  + L  +M+  G  P V+TY T+  G  +   V+ A+ L   M   G   +T +YT 
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + GLC+    ++A EL   +    C  +   +N LI+ +CK G  + A EL   +    
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             P++++Y+ +I GL   G+ ++A +L   M      P+ I +  +     R     K+ 
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 523

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++   +++  V  DA++ + V+  L K
Sbjct: 524 QMFDSIQDATVRSDAALYNAVISSLCK 550



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 239/482 (49%), Gaps = 25/482 (5%)

Query: 49  EAFCIFDYM-LRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNI 101
           +A  + D M LR   + PP+   +++L +  +   + +       L+A G   +    N+
Sbjct: 126 DALTVLDEMPLRGCAATPPMC--HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNL 183

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-------- 153
           +++  C+ G V  G     ++      P+  ++N+++KGL    R  +   L        
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVH 243

Query: 154 --FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
              +++   GC P++  Y T+I+G+C+ GH  +A ++   M +     G+  KPN V Y+
Sbjct: 244 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS----YGL--KPNVVCYN 297

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++ GLC     ++A+ L  +M  E+   D VT+N L+   C     +    L  +M++ 
Sbjct: 298 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 357

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P V+T+  +++  CK   +DEA  LL  M   G +PN  +Y  ++ G C   +   A
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 417

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +EL   M   GC  + V++N LIN  CK    E+A+ L ++M+  G  P +++Y+T+  G
Sbjct: 418 QELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDG 477

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  + E AL+L + M   G+  +T  Y++    L + G   + +++F +++      D
Sbjct: 478 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 537

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YN +I  LCK      A + F  +     +PN  TY I+I+GL ++G + +A+DL  
Sbjct: 538 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 597

Query: 512 DM 513
           ++
Sbjct: 598 EL 599



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 164/334 (49%), Gaps = 22/334 (6%)

Query: 55  DYMLRMHPS---PPPVSSFNILLASLAKNKHYDTRLNATGLFPNLY---------TYNIL 102
           D + RM PS    P V  +N +L  L   + ++    A  L   ++         T+NIL
Sbjct: 279 DILSRM-PSYGLKPNVVCYNTVLKGLCSAERWE---EAEDLLAEMFQEDCPLDDVTFNIL 334

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ FC+ G V        ++L     P+  T+ ++I G   E  + EA  L   + A GC
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 394

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           +PN I+Y  ++ GLCR    + A  L   M      I   C PN VT++T+I+ +CK+G 
Sbjct: 395 KPNTISYTIVLKGLCRAERWVDAQELISHM------IQQGCLPNPVTFNTLINFMCKKGL 448

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            ++A  L  QM     +PD+++Y+++I GL  A    EA  L   M+++G+ P+ + ++ 
Sbjct: 449 AEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 508

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +   L +  + D+  ++ D +    VR +A  YN ++   C   + +RA + F  M S G
Sbjct: 509 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 568

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           C  ++ +Y ILI G      V EA  L  E+ S+
Sbjct: 569 CMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 127/334 (38%), Gaps = 86/334 (25%)

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           + L+   C  G+   A     ++++ G     V+YN +I GYC+  +V  A  L   +  
Sbjct: 48  SALIRSLCAAGRTADAAR---ALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV-- 102

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA-------------------- 415
             + P   TY  +   L     +  AL + DEM   G AA                    
Sbjct: 103 -PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 416 ---------------DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--- 457
                          D+      +  +C+ G + E VEL R L    CE DI +YN    
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 458 ------------------------------------------LIDGLCKSGRLKFAWELF 475
                                                     +IDG+CK G  + A ++ 
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +P   L PNVV YN +++GLC+  + ++A DL  +M +     D +TF++L+  F + 
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               +V ELL +M E   +PD    + V++   K
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 375


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 255/528 (48%), Gaps = 27/528 (5%)

Query: 54  FDYMLRMHPS---PPPVSSFNILLASLAK-NKHYDTR--LNATGLFPNLYTYNILINCFC 107
            D  LR+  S   PP V+  N L+  L +  +  D    + A G      TY+ L + +C
Sbjct: 72  LDAALRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEACGSAATAVTYSALADGYC 131

Query: 108 KIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           ++GR+        R++      P+A  +N L+  L    ++ +A  L   +   GC P+V
Sbjct: 132 RVGRLDEAR----RVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDV 187

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TYN L+   C+      A+ L + M          C P  VTY+ I+DG+C+EG VD A
Sbjct: 188 VTYNILLEAACKGRGYRQAMELIDLMRVEG------CTPTNVTYNVIMDGMCREGDVDYA 241

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + L   +      P+ V YN+++ GL  A  W + + L  EM  +   PS  T +V++  
Sbjct: 242 RELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISS 301

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LC+      A RLL+ M +     N  TYN ++ G C  G ++ A  L  +M++ GCK +
Sbjct: 302 LCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPN 361

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             +YNIL+ G C  +  E+A  L  +M      P ++T+NT+   L +      A+++F 
Sbjct: 362 IFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFK 421

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           +M   G   ++ TY++ I+GL K G + +++EL   +       +I  Y+ L + L +  
Sbjct: 422 QMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEED 480

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           +L  A ++   L    + P  V YN ++ GLC +G+ D+A D+  +M  +   PD  T+ 
Sbjct: 481 KLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYS 540

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           +LI G        +  ELL  +  + V         +VD L+KN+ SL
Sbjct: 541 ILIQGLAHEGYMKEARELLSTLSSRDV---------IVDNLIKNDASL 579



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 216/453 (47%), Gaps = 28/453 (6%)

Query: 119 FGRILRSCFTPNAATFNSLI--------KGLHAESRIM-------EAAALFTKLKAFGCE 163
             +ILRS   PNA +F            + LH E R +       E  A    +++  C 
Sbjct: 27  LSQILRS-SNPNAPSFPKPNPDPPPPPPRRLHGEDRRLSSLVHRGELDAALRVVESSLCP 85

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V   N L+  LCR G    A  + E   +             VTYS + DG C+ G +
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVVEACGSA---------ATAVTYSALADGYCRVGRL 136

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A+ +   M    + P    YN L+H LC      +A  L   M+ +G  P VVT+N++
Sbjct: 137 DEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNIL 193

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           ++  CK R   +A  L+DLM   G  P   TYN +MDG C  G ++ A EL  S+ S GC
Sbjct: 194 LEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGC 253

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + V+YN ++ G       E+   L  EM S+   P+  T + +   L +    + A++
Sbjct: 254 TPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIR 313

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L ++M +    A+  TY   + GLC+ G++  A+ L   ++   C+ +I  YN L+ GLC
Sbjct: 314 LLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLC 373

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            + R + A +L   +     +P+++T+N +I  LC  G   +A ++F  M E    P+ +
Sbjct: 374 NAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSV 433

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           T+  +I G  +  +  +  ELL++M  K   P+
Sbjct: 434 TYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE 466



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 202/401 (50%), Gaps = 14/401 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           +A  + D ML      P V ++NILL +  K + Y   +         G  P   TYN++
Sbjct: 170 DALVLLDNML-YRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVI 228

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  C+ G V         +     TPN   +N+++KGL    R  +   L  ++ +  C
Sbjct: 229 MDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENC 288

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  T + +I+ LC+ G    A+ L E+M+  +      C  N VTY+ ++ GLC++G 
Sbjct: 289 PPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD------CTANIVTYNAVVSGLCEQGH 342

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A  L   M+ +   P++ TYN L+ GLC+A  W +A+ L  +M      P ++TFN 
Sbjct: 343 VDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNT 402

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I+  LC+     +A  +   M ++G  PN+ TY+++++G    GK+ ++ EL   M S G
Sbjct: 403 IIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG 462

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
             + +++Y++L     +  ++ EA+ +  ++   GI P  V YNT+ LGL    + + A+
Sbjct: 463 -FNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            +   M  DG   D  TY+  I GL   GY+ EA EL  TL
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 223/455 (49%), Gaps = 17/455 (3%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P+ Y YN L++  C  G+V    +    +L     P+  T+N L++         +A 
Sbjct: 148 VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAM 207

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L   ++  GC P  +TYN +++G+CR G    A  L   + +        C PNTV Y+
Sbjct: 208 ELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYG------CTPNTVNYN 261

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++ GL   G  +  + L  +M  EN  P   T + +I  LC    +  A RL  +M   
Sbjct: 262 TVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKH 321

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
               ++VT+N ++  LC+   +D A  LL  M   G +PN  TYN L+ G C   +   A
Sbjct: 322 DCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDA 381

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E+L   M    C  D +++N +I   C+     +A+ ++++M  KG  P  VTY+++  G
Sbjct: 382 EDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEG 441

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  ++E +L+L +EM   G   +   Y    + L +   ++EA+++   L+       
Sbjct: 442 LAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQ 500

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YN ++ GLC++G+   A ++  ++     +P+  TY+I+IQGL ++G M +AR+L  
Sbjct: 501 AVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLS 560

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            +          + D+++   I+ N+ S +++ +H
Sbjct: 561 TLS---------SRDVIVDNLIK-NDASLLDQSIH 585



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 166/348 (47%), Gaps = 6/348 (1%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PDV   N L+  LC      +A R+ +E    G   + VT++ + D  C+  ++DEA R+
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARV-VEAC--GSAATAVTYSALADGYCRVGRLDEARRV 142

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +D M    V P+A  YN LM   C+ G++  A  L  +M   GC  D V+YNIL+   CK
Sbjct: 143 VDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACK 199

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            +   +A+ L   M  +G  PT VTYN +  G+     V++A +L + +   G   +T  
Sbjct: 200 GRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVN 259

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T + GL   G   +  EL   +    C       + +I  LC+ G  + A  L   + 
Sbjct: 260 YNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMS 319

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                 N+VTYN ++ GLC  G +D A  L  +M+ +   P++ T+++L+ G        
Sbjct: 320 KHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWE 379

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              +L+ KM +   +PD    + ++  L +  ++++++  F     +G
Sbjct: 380 DAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKG 427


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 233/468 (49%), Gaps = 19/468 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  ++YTY I+++ FCK G +      F  +     TPN  T+ +LI       ++  A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC------- 203
             LF  + + GC PN++TY+ LI+G C+ G    A  +FE M  G+ ++  V        
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC-GSKDVPDVDMYFKQYD 631

Query: 204 ----KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
               +PN VTY  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     +
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           EA+ +  EM + G   ++ T++ ++D   K ++ D AS++L  M++    PN   Y  ++
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG C +GK + A +L   ME  GC+ + V+Y  +I+G+    ++E  L L   M SKG+ 
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  VTY  L     +   ++ A  L +EM++      T  Y   I+G   N   IE++ L
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGL 869

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP--HGVLVPNVVTYNIMIQGL 497
              +        +  Y  LID L K+ RL+ A  L   +      LV    TYN +I+ L
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           C   +++ A  LF +M +    P++ +F  LI G  R    SK++E L
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR---NSKISEAL 974



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 242/507 (47%), Gaps = 28/507 (5%)

Query: 86  RLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           R+ AT   PN+ TY+ L+ C C    ++GR     +    ++  C+ P+   FNSL+   
Sbjct: 327 RMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR--VLNMMMMEGCY-PSPKIFNSLVHAY 382

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA--LNLFEEMANGNGEI 199
                   A  L  K+   G  P  + YN LI  +C    ++    L+L E+  +     
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GVV   N +  S+    LC  G  +KA ++  +M  +   PD  TY+ +++ LC+A+   
Sbjct: 443 GVVL--NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  LF EM   G+   V T+ +++D  CK   +++A +  + M + G  PN  TY  L+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGI 378
             +    K++ A ELF +M S GC  + V+Y+ LI+G+CK  +VE+A  ++  M  SK +
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 379 ---------------KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                          +P VVTY  L  G  + H+VE A KL D M  +G   +   Y   
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGLCK G + EA E+   +        +  Y+ LID   K  R   A ++   +     
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PNVV Y  MI GLC  G+ D+A  L   MEE    P+V+T+  +I GF  I +     E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           LL +M  K V P+     +++D   KN
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKN 827



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 241/515 (46%), Gaps = 42/515 (8%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+L+   C+ G  S+     GR+    F P+ +T+N LI+      R+  A+ +  ++  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
                +  T       LC+ G    AL L E       E  V   P+TV Y+ +I GLC+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCE 314

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
               ++A     +M+  +  P+VVTY++L+ G  +       KR+   MM +G  PS   
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK------INRAEE 333
           FN ++   C +     A +LL  MV+ G  P    YN L+   C          ++ AE+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            +  M + G   + ++ +      C   + E+A S+ REM+ +G  P   TY+ +   L 
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              ++E A  LF+EM+R G+ AD  TYT  +D  CK G I +A + F  +R + C  ++ 
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--- 510
            Y  LI    K+ ++ +A ELF ++     +PN+VTY+ +I G C  GQ++KA  +F   
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 511 --------LDM-----EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
                   +DM     ++N+  P+V+T+  L+ GF + +   +  +LL  M  +   P+ 
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674

Query: 558 SIVSIVVDLL-----------VKNEISLKSLPSFL 581
            +   ++D L           VK E+S    P+ L
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 246/526 (46%), Gaps = 36/526 (6%)

Query: 55  DYMLRMHPSP--PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D++ RM  +   P V +++ LL        L + K     +   G +P+   +N L++ +
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------AAALFTKLKAF 160
           C  G  S  +    ++++    P    +N LI  +  +   +       A   ++++ A 
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   N I  ++    LC  G    A ++  EM  G G I     P+T TYS +++ LC  
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTSTYSKVLNYLCNA 496

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             ++ A  LF +MK   +  DV TY  ++   C A    +A++ F EM + G  P+VVT+
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
             ++    K +K+  A+ L + M+  G  PN  TY+ L+DG C  G++ +A ++F  M  
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616

Query: 339 -------ESMGCKHDD-------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                  +    ++DD       V+Y  L++G+CK+  VEEA  L   M  +G +P  + 
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  GL ++ +++ A ++  EM   G  A   TY++ ID   K      A ++   + 
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  +IDGLCK G+   A++L   +      PNVVTY  MI G    G+++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
              +L   M     AP+ +T+ +LI    +       + LL +MK+
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 173/429 (40%), Gaps = 88/429 (20%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V ++  L+ +  K       N+ ++T L + G  PN+ TY+ LI+  CK G+V     
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETML-SEGCLPNIVTYSALIDGHCKAGQVEKACQ 609

Query: 118 AFGRILRS----------------CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            F R+  S                   PN  T+ +L+ G     R+ EA  L   +   G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV------------------- 202
           CEPN I Y+ LI+GLC+ G    A  +  EM+       +                    
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 203 ----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     C PN V Y+ +IDGLCK G  D+A  L   M+++   P+VVTY ++I G 
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR------ 306
                      L   M  +GV P+ VT+ V++D  CKN  +D A  LL+ M Q       
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 307 -GVR--------------------------PNACTYNTLMDGFCLMGKINRAEELFGSME 339
            G R                          P    Y  L+D      ++  A  L   + 
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909

Query: 340 SMGCKHDDVS--YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +      D S  YN LI   C   +VE A  L+ EM  KG+ P + ++ +L  GLF   +
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969

Query: 398 VEHALKLFD 406
           +  AL L D
Sbjct: 970 ISEALLLLD 978



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 47/284 (16%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H  P  + +++ L+    K K  D      +++      PN+  Y  +I+  CK+G+   
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            +     +      PN  T+ ++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-----GFVD----- 224
             C+ G   +A NL EEM   +         +T  Y  +I+G  KE     G +D     
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTHWPT------HTAGYRKVIEGFNKEFIESLGLLDEIGQD 876

Query: 225 -----------------KAKALFLQMK--------DENINPDVVTYNSLIHGLCHANDWN 259
                            KA+ L + ++           +     TYNSLI  LC AN   
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            A +LF EM  +GV P + +F  ++  L +N K+ EA  LLD +
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/400 (19%), Positives = 153/400 (38%), Gaps = 77/400 (19%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN+L+  +   +D    +    ++ D   +      NV++ + C+N     A   L  + 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 305 QRGVRPNACTYNTL--------------------------MDGFCL------MGKINRAE 332
               RP+  TYN L                          MDGF L      + K+ +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E    +E+     D V Y  LI+G C+    EEA+     M +    P VVTY+TL  G 
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC---- 448
               Q+    ++ + M  +G     + + + +   C +G    A +L +  +++KC    
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK--KMVKCGHMP 405

Query: 449 ------------------------ELDIQAYNCLIDG---------------LCKSGRLK 469
                                   +L  +AY+ ++                 LC +G+ +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+ +   +     +P+  TY+ ++  LCN  +M+ A  LF +M+      DV T+ +++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             F +     +  +  ++M+E    P+    + ++   +K
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 255/542 (47%), Gaps = 14/542 (2%)

Query: 53   IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
            + DYM+        V ++N+ + +L  N           ++    + PN  TYN LIN F
Sbjct: 1041 LIDYMI-CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099

Query: 107  CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
             K G++ +    F  + +   +PN  T+N+LI G        EA  L   ++A G   N 
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159

Query: 167  ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
            +TY TL+NGLC+     +A  L E M   +  +G       + Y+ +IDGLCK G +D+A
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG------HIAYTVLIDGLCKNGMLDEA 1213

Query: 227  KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
              L   M  + +NPDV+TY+SLI+G C   +   AK +   M   G+  + + ++ ++  
Sbjct: 1214 VQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYN 1273

Query: 287  LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             C++  + EA ++  +M   G   +  T N L+   C  GK+  AE+    M  +G   +
Sbjct: 1274 FCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPN 1333

Query: 347  DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             ++Y+ +INGY    +   A S + +M+  G  P+  TY +L  GL +   +  A K  +
Sbjct: 1334 SITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 1393

Query: 407  EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
             +     A D+  Y T +   CK+G + EAV LF  +       D   Y+ L+ GLC+ G
Sbjct: 1394 RLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 1453

Query: 467  RLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            +   A  LF  ++  G L PN V Y  ++ GL   G    A   F +M +    PD + F
Sbjct: 1454 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAF 1513

Query: 526  DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
            + +I    R  +  K N+    M+   V P+ +  +I++    K +  L+ L  +    R
Sbjct: 1514 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 1573

Query: 586  QG 587
            +G
Sbjct: 1574 EG 1575



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 242/508 (47%), Gaps = 23/508 (4%)

Query: 53   IFDYMLRMHP---SPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
            IF  ++  +P   S P V  F++L+    K    D  +         G  P++YT N+++
Sbjct: 899  IFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMIL 956

Query: 104  NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
                K  R  L +  F  +      PN  TFN LI GL  E  + +A  L  +++  G  
Sbjct: 957  ASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV 1016

Query: 164  PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIIDGLCKE 220
            P ++TYNTL+N  C+ G    A+ L + M         +CK    +  TY+  ID LC  
Sbjct: 1017 PTIVTYNTLLNWYCKKGRYKAAIELIDYM---------ICKGIEADVCTYNVFIDNLCTN 1067

Query: 221  GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
                KA  L  +M+ E I+P+ VTYN+LI+G         A ++F EM    + P+ VT+
Sbjct: 1068 HRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTY 1127

Query: 281  NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            N ++   C     +EA RLLD M   G+R N  TY TL++G C   K   A+ L   M  
Sbjct: 1128 NALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRV 1187

Query: 341  MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
                   ++Y +LI+G CKN  ++EA+ L   M   G+ P V+TY++L  G   +  ++ 
Sbjct: 1188 NDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKS 1247

Query: 401  ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
            A ++   M R G+  +   Y+T I   C++G + EA++++  +       D    N L+ 
Sbjct: 1248 AKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVS 1307

Query: 461  GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
             LC+ G+L  A +  C +    LVPN +TY+ +I G  + G    A   F DM +    P
Sbjct: 1308 SLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 1367

Query: 521  DVITFDMLIHGFIRINEPSKVNELLHKM 548
               T+  L+ G  +     +  + L+++
Sbjct: 1368 SFFTYGSLLKGLCKGGNLVEAKKFLNRL 1395



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 257/578 (44%), Gaps = 83/578 (14%)

Query: 65   PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V + N++LAS+ K+K  +        ++  G+ PN+ T+NILIN  C  G +      
Sbjct: 947  PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 1006

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++  + F P   T+N+L+     + R   A  L   +   G E +V TYN  I+ LC 
Sbjct: 1007 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 1066

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
               +  A  L ++M         +  PN VTY+T+I+G  KEG +  A  +F +M   ++
Sbjct: 1067 NHRSAKAYLLLKKMRKE------MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 1120

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT------------------- 279
            +P+ VTYN+LI G CH  D+ EA RL   M   G++ + VT                   
Sbjct: 1121 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 1180

Query: 280  ----------------FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                            + V++D LCKN  +DEA +L+  M + GV P+  TY++L++GFC
Sbjct: 1181 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240

Query: 324  LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR------------ 371
             +G I  A+E+   M   G   + + Y+ LI  +C++  V EA+ +Y             
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 1300

Query: 372  -----------------------EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
                                    M   G+ P  +TY+ +  G   I    +A   FD+M
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 1360

Query: 409  QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
             + G      TY + + GLCK G ++EA +    L  +   +D   YN L+   CKSG L
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420

Query: 469  KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF-LDMEENAAAPDVITFDM 527
              A  LF  +    ++P+  TY+ ++ GLC  G+   A  LF   M      P+ + +  
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480

Query: 528  LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            L+ G  +   P        +M +K   PD    + ++D
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIID 1518



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 222/434 (51%), Gaps = 6/434 (1%)

Query: 132  ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            + F+ LI+    E  I  A   F  +   G +P+V T N ++  + +   T +  +LF E
Sbjct: 915  SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 974

Query: 192  MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
            M++       +C PN  T++ +I+GLC EG + KA  L  QM++    P +VTYN+L++ 
Sbjct: 975  MSDKG-----IC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 1028

Query: 252  LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
             C    +  A  L   M+ +G++  V T+NV +D LC N +  +A  LL  M +  + PN
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 1088

Query: 312  ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
              TYNTL++GF   GKI  A ++F  M       + V+YN LI G+C   + EEAL L  
Sbjct: 1089 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 1148

Query: 372  EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
             M + G++   VTY TL  GL +  + E A +L + M+ + +      YT  IDGLCKNG
Sbjct: 1149 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 1208

Query: 432  YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
             + EAV+L   +       D+  Y+ LI+G C+ G +K A E+ C +    LV N + Y+
Sbjct: 1209 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 1268

Query: 492  IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
             +I   C  G + +A  ++  M  N    D  T ++L+    R  +  +  + L  M   
Sbjct: 1269 TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 1328

Query: 552  KVMPDASIVSIVVD 565
             ++P++     +++
Sbjct: 1329 GLVPNSITYDCIIN 1342



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 241/517 (46%), Gaps = 18/517 (3%)

Query: 47   PNEAFCIFDYMLR--MHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYT 98
            P  AF  FD M++   HPS     ++  LL  L K       K +  RL+      +   
Sbjct: 1350 PLNAFSFFDDMIKCGQHPS---FFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 1406

Query: 99   YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            YN L+   CK G +      F +++++   P++ T++SL+ GL  + + + A  LF    
Sbjct: 1407 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 1466

Query: 159  AFGCE-PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G   PN + Y  L++GL + GH   A   FEEM          C P+TV ++ IID  
Sbjct: 1467 GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG-----TC-PDTVAFNAIIDSC 1520

Query: 218  CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
             + G + KA   F  M+   + P++ TYN L+HG            L+  MM +G+ P  
Sbjct: 1521 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 1580

Query: 278  VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            +TF+ ++  L K+   D   +LL  M+  G   +  T+N L++ +   GK+ +A +L   
Sbjct: 1581 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 1640

Query: 338  MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            M ++G   D  +YN + NG  K     E+  +  EM+  G+ P    Y TL  G+  +  
Sbjct: 1641 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 1700

Query: 398  VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            ++ A KL DEM+  G  +     +  + GL   G   +A+ +   +  ++    I  +  
Sbjct: 1701 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1760

Query: 458  LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            L+   C+  ++  A +L   +    L  +VV YN++I G+C +G    A +L+ +M    
Sbjct: 1761 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1820

Query: 518  AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              P++ T+ +L+      N   +  +LL  ++E+ ++
Sbjct: 1821 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 241/537 (44%), Gaps = 48/537 (8%)

Query: 71   NILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
            N+L++SL ++      + +   ++  GL PN  TY+ +IN +  IG     F  F  +++
Sbjct: 1303 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 1362

Query: 125  SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
                P+  T+ SL+KGL     ++EA     +L       + + YNTL+   C++G+   
Sbjct: 1363 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 1422

Query: 185  ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF-LQMKDENINPDVV 243
            A+ LF++M   N        P++ TYS+++ GLC++G    A  LF   M    + P+ V
Sbjct: 1423 AVALFDKMVQNN------VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 1476

Query: 244  TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
             Y  L+ GL  A     A   F EMM +G  P  V FN I+D   +  +M +A+     M
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 304  VQRGVRPNACTYNTLMDGFCLMGKINR--------------------------------- 330
               GV PN  TYN L+ GF     + R                                 
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 331  --AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
                +L G M   G   D  ++NILIN Y ++ ++ +A  L   M + G+ P   TYN +
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656

Query: 389  FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
            F GL +      +  +  EM  +GV      Y T I+G+C+ G I  A +L   +  L  
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 449  ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
                 A + ++ GL   G+ + A  +   +    L+P + T+  ++   C D ++ +A  
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776

Query: 509  LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            L   ME      DV+ +++LI G     + +   EL  +M+ + + P+ +  +++VD
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1833



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 177/363 (48%)

Query: 202  VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
            +C      +  +I    KEG +D A   F  +      P V T N ++  +         
Sbjct: 909  LCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 968

Query: 262  KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
              LF EM D+G+ P+V TFN++++ LC    + +A  LL  M + G  P   TYNTL++ 
Sbjct: 969  WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 1028

Query: 322  FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            +C  G+   A EL   M   G + D  +YN+ I+  C N    +A  L ++M  + I P 
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 1088

Query: 382  VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             VTYNTL  G  +  ++  A ++F+EM +  ++ +  TY   I G C  G   EA+ L  
Sbjct: 1089 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 1148

Query: 442  TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             +      L+   Y  L++GLCK  + + A  L   +    +V   + Y ++I GLC +G
Sbjct: 1149 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 1208

Query: 502  QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
             +D+A  L  +M ++   PDVIT+  LI+GF R+       E++ +M    ++ +  I S
Sbjct: 1209 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 1268

Query: 562  IVV 564
             ++
Sbjct: 1269 TLI 1271



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 221/470 (47%), Gaps = 7/470 (1%)

Query: 87   LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
            +N  G   + +T N+L++  C+ G++         + R    PN+ T++ +I G  +   
Sbjct: 1290 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 1349

Query: 147  IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             + A + F  +   G  P+  TY +L+ GLC+ G+ + A      +    G +      +
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV------D 1403

Query: 207  TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +V Y+T++   CK G + +A ALF +M   N+ PD  TY+SL+ GLC       A  LF 
Sbjct: 1404 SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 1463

Query: 267  EMMDQGVQ-PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
              M +G   P+ V +  ++D L K      A    + M+++G  P+   +N ++D     
Sbjct: 1464 TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 1523

Query: 326  GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            G++ +A + F +M   G   +  +YNIL++G+ K + +   LSLY  M+ +GI P  +T+
Sbjct: 1524 GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 1583

Query: 386  NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            ++L LGL +    +  +KL  +M  +G  AD  T+   I+   ++G + +A +L   +  
Sbjct: 1584 HSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNT 1643

Query: 446  LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            L    D   YN + +GL K    + +  +   +    ++P    Y  +I G+C  G +  
Sbjct: 1644 LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 1703

Query: 506  ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            A  L  +ME        +    ++ G +   +      +L  M   +++P
Sbjct: 1704 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1753



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 6/314 (1%)

Query: 261  AKRLFIEMMDQ----GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
            +K +F  +MD        PSV  F++++    K   +D A    +L+   G +P+  T N
Sbjct: 896  SKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCN 953

Query: 317  TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
             ++       +      LF  M   G   +  ++NILING C    +++A +L ++M   
Sbjct: 954  MILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEEN 1013

Query: 377  GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            G  PT+VTYNTL     +  + + A++L D M   G+ AD  TY  FID LC N    +A
Sbjct: 1014 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 1073

Query: 437  VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
              L + +R      +   YN LI+G  K G++  A ++F  +    L PN VTYN +I G
Sbjct: 1074 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 1133

Query: 497  LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             C+ G  ++A  L   ME      + +T+  L++G  +  +      LL +M+   ++  
Sbjct: 1134 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 1193

Query: 557  ASIVSIVVDLLVKN 570
                ++++D L KN
Sbjct: 1194 HIAYTVLIDGLCKN 1207



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 18/302 (5%)

Query: 287  LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM-----------------GKIN 329
            L K R  D A  +L  + Q G+   +  +  LMD + L                  G I+
Sbjct: 873  LVKARMYDSAKSILRHLCQMGIGSKS-IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 931

Query: 330  RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
             A E F  +  +G K    + N+++    K+K  E   SL+REM  KGI P V T+N L 
Sbjct: 932  YAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 991

Query: 390  LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             GL     ++ A  L  +M+ +G      TY T ++  CK G    A+EL   +     E
Sbjct: 992  NGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE 1051

Query: 450  LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             D+  YN  ID LC + R   A+ L   +   ++ PN VTYN +I G   +G++  A  +
Sbjct: 1052 ADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQV 1111

Query: 510  FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            F +M +   +P+ +T++ LI G   + +  +   LL  M+   +  +      +++ L K
Sbjct: 1112 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK 1171

Query: 570  NE 571
            +E
Sbjct: 1172 HE 1173



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%)

Query: 429  KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
            K G I  AVE F  + ++  +  +   N ++  + K  R +  W LF  +    + PNV 
Sbjct: 926  KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 985

Query: 489  TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            T+NI+I GLC +G + KA +L   MEEN   P ++T++ L++ + +        EL+  M
Sbjct: 986  TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045

Query: 549  KEKKVMPDASIVSIVVDLLVKNEISLKS 576
              K +  D    ++ +D L  N  S K+
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKA 1073


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 232/446 (52%), Gaps = 6/446 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P + T N +++ F K+ R+ + ++ +  + R   +    TFN ++  L  E +
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A      ++  G +PNV++YNT+I+G    G+   A  + + M     E      P+
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE------PD 296

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + TY ++I G+CKEG +++A  LF +M +  + P+ VTYN+LI G C+  D   A     
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +G+ PSV T+N+++  L    +M EA  ++  M ++G+ P+A TYN L++G+   G
Sbjct: 357 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 416

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              +A +L   M S G +   V+Y  LI    +   ++EA  L+ +++ +G+ P V+ +N
Sbjct: 417 NAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 476

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  G      VE A  L  EM R  V  D  T+ T + G C+ G + EA  L   ++  
Sbjct: 477 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 536

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + D  +YN LI G  + G +K A+ +   +      P ++TYN +I+ LC + + D A
Sbjct: 537 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 596

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGF 532
            +L  +M     +PD  T+  LI G 
Sbjct: 597 EELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 239/481 (49%), Gaps = 12/481 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++L+   C++ R    F  F  +      P   T N ++      +R+  A  L+ ++ 
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
                  V T+N ++N LC+ G    A      M       G+  KPN V+Y+TII G  
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYNTIIHGYS 273

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
             G ++ A+ +   M+ + I PD  TY SLI G+C      EA  LF +M++ G+ P+ V
Sbjct: 274 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++D  C    ++ A    D MV++G+ P+  TYN L+    + G++  A+++   M
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D ++YNILINGY +    ++A  L+ EM+SKGI+PT VTY +L   L   +++
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  LF+++   GV+ D   +   +DG C NG +  A  L + +       D   +N L
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           + G C+ G+++ A  L   +    + P+ ++YN +I G    G +  A  +  +M     
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI-VSIV-----VDLLVKNEI 572
            P ++T++ LI    +  E     ELL +M  K + PD S  +S++     VD LV++  
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDNA 633

Query: 573 S 573
           S
Sbjct: 634 S 634



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 208/421 (49%), Gaps = 36/421 (8%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           A+ ++  M R+  S   V +FNI++        L K + +   +   G  PN+ +YN +I
Sbjct: 211 AWVLYAEMFRLRISST-VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTII 269

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +   G +         +      P++ T+ SLI G+  E R+ EA+ LF K+   G  
Sbjct: 270 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 329

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGN---------------------GEIGVV 202
           PN +TYNTLI+G C  G    A +  +EM                         GE   +
Sbjct: 330 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 389

Query: 203 CK--------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
            K        P+ +TY+ +I+G  + G   KA  L  +M  + I P  VTY SLI+ L  
Sbjct: 390 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
            N   EA  LF +++DQGV P V+ FN ++D  C N  ++ A  LL  M ++ V P+  T
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 509

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           +NTLM G C  GK+  A  L   M+  G K D +SYN LI+GY +  ++++A  +  EM+
Sbjct: 510 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 569

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           S G  PT++TYN L   L +  + + A +L  EM   G++ D  TY + I+G+     ++
Sbjct: 570 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 629

Query: 435 E 435
           E
Sbjct: 630 E 630



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 180/377 (47%), Gaps = 5/377 (1%)

Query: 182 TMIALN--LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           T IA N  LF+E+      + V    +++ +  ++   C+    D+A   F  MK++ I 
Sbjct: 133 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 189

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P + T N ++      N    A  L+ EM    +  +V TFN++++ LCK  K+ +A   
Sbjct: 190 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 249

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M   G +PN  +YNT++ G+   G I  A  +  +M   G + D  +Y  LI+G CK
Sbjct: 250 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 309

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              +EEA  L+ +MV  G+ P  VTYNTL  G      +E A    DEM + G+     T
Sbjct: 310 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 369

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   +  L   G + EA ++ + +R      D   YN LI+G  + G  K A++L   + 
Sbjct: 370 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 429

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P  VTY  +I  L    +M +A DLF  + +   +PDVI F+ ++ G        
Sbjct: 430 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 489

Query: 540 KVNELLHKMKEKKVMPD 556
           +   LL +M  K V PD
Sbjct: 490 RAFMLLKEMDRKSVPPD 506



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 38/307 (12%)

Query: 262 KRLFIEMM---DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           + LF E+    D+    S + F++++   C+ R+ DEA +   +M ++G+ P   T N +
Sbjct: 139 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 198

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  F  + ++  A  L+  M  +       ++NI++N  CK  ++++A      M   G 
Sbjct: 199 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 258

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           KP VV+YNT+                                   I G    G I  A  
Sbjct: 259 KPNVVSYNTI-----------------------------------IHGYSSRGNIEGARR 283

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +R+   E D   Y  LI G+CK GRL+ A  LF  +    LVPN VTYN +I G C
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 343

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           N G +++A     +M +    P V T+++L+H         + ++++ +M++K ++PDA 
Sbjct: 344 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403

Query: 559 IVSIVVD 565
             +I+++
Sbjct: 404 TYNILIN 410



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 120/236 (50%), Gaps = 1/236 (0%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +EL  S + +  K   + +++L+   C+ +  +EA   +  M  KGI P + T N +   
Sbjct: 143 DELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSL 201

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +++++E A  L+ EM R  +++   T+   ++ LCK G + +A E    +  L  + +
Sbjct: 202 FLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN 261

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + +YN +I G    G ++ A  +  ++    + P+  TY  +I G+C +G++++A  LF 
Sbjct: 262 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 321

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            M E    P+ +T++ LI G+    +  +      +M +K +MP  S  +++V  L
Sbjct: 322 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 233/468 (49%), Gaps = 19/468 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  ++YTY I+++ FCK G +      F  +     TPN  T+ +LI       ++  A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC------- 203
             LF  + + GC PN++TY+ LI+G C+ G    A  +FE M  G+ ++  V        
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC-GSKDVPDVDMYFKQYD 631

Query: 204 ----KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
               +PN VTY  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     +
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           EA+ +  EM + G   ++ T++ ++D   K ++ D AS++L  M++    PN   Y  ++
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG C +GK + A +L   ME  GC+ + V+Y  +I+G+    ++E  L L   M SKG+ 
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  VTY  L     +   ++ A  L +EM++      T  Y   I+G   N   IE++ L
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGL 869

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP--HGVLVPNVVTYNIMIQGL 497
              +        +  Y  LID L K+ RL+ A  L   +      LV    TYN +I+ L
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           C   +++ A  LF +M +    P++ +F  LI G  R    SK++E L
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR---NSKISEAL 974



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 242/507 (47%), Gaps = 28/507 (5%)

Query: 86  RLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           R+ AT   PN+ TY+ L+ C C    ++GR     +    ++  C+ P+   FNSL+   
Sbjct: 327 RMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR--VLNMMMMEGCY-PSPKIFNSLVHAY 382

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA--LNLFEEMANGNGEI 199
                   A  L  K+   G  P  + YN LI  +C    ++    L+L E+  +     
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GVV   N +  S+    LC  G  +KA ++  +M  +   PD  TY+ +++ LC+A+   
Sbjct: 443 GVVL--NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  LF EM   G+   V T+ +++D  CK   +++A +  + M + G  PN  TY  L+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGI 378
             +    K++ A ELF +M S GC  + V+Y+ LI+G+CK  +VE+A  ++  M  SK +
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 379 ---------------KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                          +P VVTY  L  G  + H+VE A KL D M  +G   +   Y   
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGLCK G + EA E+   +        +  Y+ LID   K  R   A ++   +     
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PNVV Y  MI GLC  G+ D+A  L   MEE    P+V+T+  +I GF  I +     E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           LL +M  K V P+     +++D   KN
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKN 827



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 241/515 (46%), Gaps = 42/515 (8%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+L+   C+ G  S+     GR+    F P+ +T+N LI+      R+  A+ +  ++  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
                +  T       LC+ G    AL L E       E  V   P+TV Y+ +I GLC+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCE 314

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
               ++A     +M+  +  P+VVTY++L+ G  +       KR+   MM +G  PS   
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK------INRAEE 333
           FN ++   C +     A +LL  MV+ G  P    YN L+   C          ++ AE+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            +  M + G   + ++ +      C   + E+A S+ REM+ +G  P   TY+ +   L 
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              ++E A  LF+EM+R G+ AD  TYT  +D  CK G I +A + F  +R + C  ++ 
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--- 510
            Y  LI    K+ ++ +A ELF ++     +PN+VTY+ +I G C  GQ++KA  +F   
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 511 --------LDM-----EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
                   +DM     ++N+  P+V+T+  L+ GF + +   +  +LL  M  +   P+ 
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674

Query: 558 SIVSIVVDLL-----------VKNEISLKSLPSFL 581
            +   ++D L           VK E+S    P+ L
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 246/526 (46%), Gaps = 36/526 (6%)

Query: 55  DYMLRMHPSP--PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D++ RM  +   P V +++ LL        L + K     +   G +P+   +N L++ +
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------AAALFTKLKAF 160
           C  G  S  +    ++++    P    +N LI  +  +   +       A   ++++ A 
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   N I  ++    LC  G    A ++  EM  G G I     P+T TYS +++ LC  
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTSTYSKVLNYLCNA 496

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             ++ A  LF +MK   +  DV TY  ++   C A    +A++ F EM + G  P+VVT+
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
             ++    K +K+  A+ L + M+  G  PN  TY+ L+DG C  G++ +A ++F  M  
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616

Query: 339 -------ESMGCKHDD-------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                  +    ++DD       V+Y  L++G+CK+  VEEA  L   M  +G +P  + 
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  GL ++ +++ A ++  EM   G  A   TY++ ID   K      A ++   + 
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  +IDGLCK G+   A++L   +      PNVVTY  MI G    G+++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
              +L   M     AP+ +T+ +LI    +       + LL +MK+
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 173/429 (40%), Gaps = 88/429 (20%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V ++  L+ +  K       N+ ++T L + G  PN+ TY+ LI+  CK G+V     
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETML-SEGCLPNIVTYSALIDGHCKAGQVEKACQ 609

Query: 118 AFGRILRS----------------CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            F R+  S                   PN  T+ +L+ G     R+ EA  L   +   G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV------------------- 202
           CEPN I Y+ LI+GLC+ G    A  +  EM+       +                    
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 203 ----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     C PN V Y+ +IDGLCK G  D+A  L   M+++   P+VVTY ++I G 
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR------ 306
                      L   M  +GV P+ VT+ V++D  CKN  +D A  LL+ M Q       
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 307 -GVR--------------------------PNACTYNTLMDGFCLMGKINRAEELFGSME 339
            G R                          P    Y  L+D      ++  A  L   + 
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909

Query: 340 SMGCKHDDVS--YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +      D S  YN LI   C   +VE A  L+ EM  KG+ P + ++ +L  GLF   +
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969

Query: 398 VEHALKLFD 406
           +  AL L D
Sbjct: 970 ISEALLLLD 978



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 47/284 (16%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H  P  + +++ L+    K K  D      +++      PN+  Y  +I+  CK+G+   
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            +     +      PN  T+ ++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-----GFVD----- 224
             C+ G   +A NL EEM   +         +T  Y  +I+G  KE     G +D     
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTHWPT------HTAGYRKVIEGFNKEFIESLGLLDEIGQD 876

Query: 225 -----------------KAKALFLQMK--------DENINPDVVTYNSLIHGLCHANDWN 259
                            KA+ L + ++           +     TYNSLI  LC AN   
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            A +LF EM  +GV P + +F  ++  L +N K+ EA  LLD +
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/400 (19%), Positives = 153/400 (38%), Gaps = 77/400 (19%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN+L+  +   +D    +    ++ D   +      NV++ + C+N     A   L  + 
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227

Query: 305 QRGVRPNACTYNTL--------------------------MDGFCL------MGKINRAE 332
               RP+  TYN L                          MDGF L      + K+ +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E    +E+     D V Y  LI+G C+    EEA+     M +    P VVTY+TL  G 
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC---- 448
               Q+    ++ + M  +G     + + + +   C +G    A +L +  +++KC    
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK--KMVKCGHMP 405

Query: 449 ------------------------ELDIQAYNCLIDG---------------LCKSGRLK 469
                                   +L  +AY+ ++                 LC +G+ +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+ +   +     +P+  TY+ ++  LCN  +M+ A  LF +M+      DV T+ +++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             F +     +  +  ++M+E    P+    + ++   +K
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 232/446 (52%), Gaps = 6/446 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P + T N +++ F K+ R+ + ++ +  + R   +    TFN ++  L  E +
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A      ++  G +PNV++YNT+I+G    G+   A  + + M     E      P+
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE------PD 318

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + TY ++I G+CKEG +++A  LF +M +  + P+ VTYN+LI G C+  D   A     
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +G+ PSV T+N+++  L    +M EA  ++  M ++G+ P+A TYN L++G+   G
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 438

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              +A +L   M S G +   V+Y  LI    +   ++EA  L+ +++ +G+ P V+ +N
Sbjct: 439 NAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 498

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  G      VE A  L  EM R  V  D  T+ T + G C+ G + EA  L   ++  
Sbjct: 499 AMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 558

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + D  +YN LI G  + G +K A+ +   +      P ++TYN +I+ LC + + D A
Sbjct: 559 GIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 618

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGF 532
            +L  +M     +PD  T+  LI G 
Sbjct: 619 EELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 239/481 (49%), Gaps = 12/481 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++L+   C++ R    F  F  +      P   T N ++      +R+  A  L+ ++ 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
                  V T+N ++N LC+ G    A      M       G+  KPN V+Y+TII G  
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYNTIIHGYS 295

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
             G ++ A+ +   M+ + I PD  TY SLI G+C      EA  LF +M++ G+ P+ V
Sbjct: 296 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++D  C    ++ A    D MV++G+ P+  TYN L+    + G++  A+++   M
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   D ++YNILINGY +    ++A  L+ EM+SKGI+PT VTY +L   L   +++
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A  LF+++   GV+ D   +   +DG C NG +  A  L + +       D   +N L
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           + G C+ G+++ A  L   +    + P+ ++YN +I G    G +  A  +  +M     
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI-VSIV-----VDLLVKNEI 572
            P ++T++ LI    +  E     ELL +M  K + PD S  +S++     VD LV++  
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDNA 655

Query: 573 S 573
           S
Sbjct: 656 S 656



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 208/421 (49%), Gaps = 36/421 (8%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           A+ ++  M R+  S   V +FNI++        L K + +   +   G  PN+ +YN +I
Sbjct: 233 AWVLYAEMFRLRISST-VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTII 291

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + +   G +         +      P++ T+ SLI G+  E R+ EA+ LF K+   G  
Sbjct: 292 HGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV 351

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGN---------------------GEIGVV 202
           PN +TYNTLI+G C  G    A +  +EM                         GE   +
Sbjct: 352 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 411

Query: 203 CK--------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
            K        P+ +TY+ +I+G  + G   KA  L  +M  + I P  VTY SLI+ L  
Sbjct: 412 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
            N   EA  LF +++DQGV P V+ FN ++D  C N  ++ A  LL  M ++ V P+  T
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVT 531

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           +NTLM G C  GK+  A  L   M+  G K D +SYN LI+GY +  ++++A  +  EM+
Sbjct: 532 FNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEML 591

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           S G  PT++TYN L   L +  + + A +L  EM   G++ D  TY + I+G+     ++
Sbjct: 592 SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 651

Query: 435 E 435
           E
Sbjct: 652 E 652



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 180/377 (47%), Gaps = 5/377 (1%)

Query: 182 TMIALN--LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           T IA N  LF+E+      + V    +++ +  ++   C+    D+A   F  MK++ I 
Sbjct: 155 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 211

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P + T N ++      N    A  L+ EM    +  +V TFN++++ LCK  K+ +A   
Sbjct: 212 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 271

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           +  M   G +PN  +YNT++ G+   G I  A  +  +M   G + D  +Y  LI+G CK
Sbjct: 272 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 331

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              +EEA  L+ +MV  G+ P  VTYNTL  G      +E A    DEM + G+     T
Sbjct: 332 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 391

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y   +  L   G + EA ++ + +R      D   YN LI+G  + G  K A++L   + 
Sbjct: 392 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 451

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P  VTY  +I  L    +M +A DLF  + +   +PDVI F+ ++ G        
Sbjct: 452 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 511

Query: 540 KVNELLHKMKEKKVMPD 556
           +   LL +M  K V PD
Sbjct: 512 RAFMLLKEMDRKSVPPD 528



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 38/307 (12%)

Query: 262 KRLFIEMM---DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           + LF E+    D+    S + F++++   C+ R+ DEA +   +M ++G+ P   T N +
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 220

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  F  + ++  A  L+  M  +       ++NI++N  CK  ++++A      M   G 
Sbjct: 221 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 280

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           KP VV+YNT+                                   I G    G I  A  
Sbjct: 281 KPNVVSYNTI-----------------------------------IHGYSSRGNIEGARR 305

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +   +R+   E D   Y  LI G+CK GRL+ A  LF  +    LVPN VTYN +I G C
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 365

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
           N G +++A     +M +    P V T+++L+H         + ++++ +M++K ++PDA 
Sbjct: 366 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425

Query: 559 IVSIVVD 565
             +I+++
Sbjct: 426 TYNILIN 432



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 120/236 (50%), Gaps = 1/236 (0%)

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +EL  S + +  K   + +++L+   C+ +  +EA   +  M  KGI P + T N +   
Sbjct: 165 DELTLSRDRLSVK-SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSL 223

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +++++E A  L+ EM R  +++   T+   ++ LCK G + +A E    +  L  + +
Sbjct: 224 FLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN 283

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           + +YN +I G    G ++ A  +  ++    + P+  TY  +I G+C +G++++A  LF 
Sbjct: 284 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 343

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            M E    P+ +T++ LI G+    +  +      +M +K +MP  S  +++V  L
Sbjct: 344 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 233/468 (49%), Gaps = 19/468 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  ++YTY I+++ FCK G +      F  +     TPN  T+ +LI       ++  A
Sbjct: 472 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 531

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC------- 203
             LF  + + GC PN++TY+ LI+G C+ G    A  +FE M  G+ ++  V        
Sbjct: 532 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC-GSKDVPDVDMYFKQYD 590

Query: 204 ----KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
               +PN VTY  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     +
Sbjct: 591 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 650

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           EA+ +  EM + G   ++ T++ ++D   K ++ D AS++L  M++    PN   Y  ++
Sbjct: 651 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 710

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG C +GK + A +L   ME  GC+ + V+Y  +I+G+    ++E  L L   M SKG+ 
Sbjct: 711 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 770

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  VTY  L     +   ++ A  L +EM++      T  Y   I+G   N   IE++ L
Sbjct: 771 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGL 828

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP--HGVLVPNVVTYNIMIQGL 497
              +        +  Y  LID L K+ RL+ A  L   +      LV    TYN +I+ L
Sbjct: 829 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 888

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           C   +++ A  LF +M +    P++ +F  LI G  R    SK++E L
Sbjct: 889 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR---NSKISEAL 933



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 242/507 (47%), Gaps = 28/507 (5%)

Query: 86  RLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           R+ AT   PN+ TY+ L+ C C    ++GR     +    ++  C+ P+   FNSL+   
Sbjct: 286 RMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR--VLNMMMMEGCY-PSPKIFNSLVHAY 341

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM--IALNLFEEMANGNGEI 199
                   A  L  K+   G  P  + YN LI  +C    ++    L+L E+  +     
Sbjct: 342 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAA 401

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GVV   N +  S+    LC  G  +KA ++  +M  +   PD  TY+ +++ LC+A+   
Sbjct: 402 GVVL--NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  LF EM   G+   V T+ +++D  CK   +++A +  + M + G  PN  TY  L+
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGI 378
             +    K++ A ELF +M S GC  + V+Y+ LI+G+CK  +VE+A  ++  M  SK +
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 579

Query: 379 ---------------KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
                          +P VVTY  L  G  + H+VE A KL D M  +G   +   Y   
Sbjct: 580 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 639

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGLCK G + EA E+   +        +  Y+ LID   K  R   A ++   +     
Sbjct: 640 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 699

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PNVV Y  MI GLC  G+ D+A  L   MEE    P+V+T+  +I GF  I +     E
Sbjct: 700 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 759

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           LL +M  K V P+     +++D   KN
Sbjct: 760 LLERMGSKGVAPNYVTYRVLIDHCCKN 786



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 241/515 (46%), Gaps = 42/515 (8%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+L+   C+ G  S+     GR+    F P+ +T+N LI+      R+  A+ +  ++  
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
                +  T       LC+ G    AL L E       E  V   P+TV Y+ +I GLC+
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCE 273

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
               ++A     +M+  +  P+VVTY++L+ G  +       KR+   MM +G  PS   
Sbjct: 274 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 333

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL------MGKINRAEE 333
           FN ++   C +     A +LL  MV+ G  P    YN L+   C          ++ AE+
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEK 393

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            +  M + G   + ++ +      C   + E+A S+ REM+ +G  P   TY+ +   L 
Sbjct: 394 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 453

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              ++E A  LF+EM+R G+ AD  TYT  +D  CK G I +A + F  +R + C  ++ 
Sbjct: 454 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 513

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--- 510
            Y  LI    K+ ++ +A ELF ++     +PN+VTY+ +I G C  GQ++KA  +F   
Sbjct: 514 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573

Query: 511 --------LDM-----EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
                   +DM     ++N+  P+V+T+  L+ GF + +   +  +LL  M  +   P+ 
Sbjct: 574 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 633

Query: 558 SIVSIVVDLL-----------VKNEISLKSLPSFL 581
            +   ++D L           VK E+S    P+ L
Sbjct: 634 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 668



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 246/526 (46%), Gaps = 36/526 (6%)

Query: 55  DYMLRMHPSP--PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D++ RM  +   P V +++ LL        L + K     +   G +P+   +N L++ +
Sbjct: 282 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 341

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------AAALFTKLKAF 160
           C  G  S  +    ++++    P    +N LI  +  +   +       A   ++++ A 
Sbjct: 342 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAA 401

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   N I  ++    LC  G    A ++  EM  G G I     P+T TYS +++ LC  
Sbjct: 402 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTSTYSKVLNYLCNA 455

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             ++ A  LF +MK   +  DV TY  ++   C A    +A++ F EM + G  P+VVT+
Sbjct: 456 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 515

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
             ++    K +K+  A+ L + M+  G  PN  TY+ L+DG C  G++ +A ++F  M  
Sbjct: 516 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 575

Query: 339 -------ESMGCKHDD-------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                  +    ++DD       V+Y  L++G+CK+  VEEA  L   M  +G +P  + 
Sbjct: 576 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 635

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ L  GL ++ +++ A ++  EM   G  A   TY++ ID   K      A ++   + 
Sbjct: 636 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
              C  ++  Y  +IDGLCK G+   A++L   +      PNVVTY  MI G    G+++
Sbjct: 696 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 755

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
              +L   M     AP+ +T+ +LI    +       + LL +MK+
Sbjct: 756 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 801



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 173/429 (40%), Gaps = 88/429 (20%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V ++  L+ +  K       N+ ++T L + G  PN+ TY+ LI+  CK G+V     
Sbjct: 510 PNVVTYTALIHAYLKAKKVSYANELFETML-SEGCLPNIVTYSALIDGHCKAGQVEKACQ 568

Query: 118 AFGRILRS----------------CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            F R+  S                   PN  T+ +L+ G     R+ EA  L   +   G
Sbjct: 569 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 628

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV------------------- 202
           CEPN I Y+ LI+GLC+ G    A  +  EM+       +                    
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688

Query: 203 ----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                     C PN V Y+ +IDGLCK G  D+A  L   M+++   P+VVTY ++I G 
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR------ 306
                      L   M  +GV P+ VT+ V++D  CKN  +D A  LL+ M Q       
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 808

Query: 307 -GVR--------------------------PNACTYNTLMDGFCLMGKINRAEELFGSME 339
            G R                          P    Y  L+D      ++  A  L   + 
Sbjct: 809 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 868

Query: 340 SMGCKHDDVS--YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +      D S  YN LI   C   +VE A  L+ EM  KG+ P + ++ +L  GLF   +
Sbjct: 869 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 928

Query: 398 VEHALKLFD 406
           +  AL L D
Sbjct: 929 ISEALLLLD 937



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 47/284 (16%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H  P  + +++ L+    K K  D      +++      PN+  Y  +I+  CK+G+   
Sbjct: 662 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 721

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            +     +      PN  T+ ++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-----GFVD----- 224
             C+ G   +A NL EEM   +         +T  Y  +I+G  KE     G +D     
Sbjct: 782 HCCKNGALDVAHNLLEEMKQTHWPT------HTAGYRKVIEGFNKEFIESLGLLDEIGQD 835

Query: 225 -----------------KAKALFLQMK--------DENINPDVVTYNSLIHGLCHANDWN 259
                            KA+ L + ++           +     TYNSLI  LC AN   
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 895

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            A +LF EM  +GV P + +F  ++  L +N K+ EA  LLD +
Sbjct: 896 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 939



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 131/331 (39%), Gaps = 13/331 (3%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN+L+  +   +D    +    ++ D   +      NV++ + C+N     A   L  + 
Sbjct: 127 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLK 186

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
               RP+  TYN L+  F    +++ A  +   M     + D  +        CK  +  
Sbjct: 187 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 246

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           EAL+L     ++   P  V Y  L  GL E    E A+   + M+      +  TY+T +
Sbjct: 247 EALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 303

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
            G      +     +   + +  C    + +N L+   C SG   +A++L   +     +
Sbjct: 304 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 363

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA----APDVITFDMLIHGFIR----IN 536
           P  V YNI+I  +C D   D      LD+ E A     A  V+   + +  F R      
Sbjct: 364 PGYVVYNILIGSICGDK--DSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 421

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +  K   ++ +M  +  +PD S  S V++ L
Sbjct: 422 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 452


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 234/472 (49%), Gaps = 7/472 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL- 157
           Y  ++N  CK G V    +   ++LR  F  +     SL+        + EA  +F K+ 
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 256

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K   C PN +TY+ LI+GLC  G    A  L +EM          C+P+T TY+ +I   
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG------CQPSTRTYTVLIKAK 310

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G  DKA  +  +M  +   P+V TY  LI  LC      EA  +F +M+  G+ P +
Sbjct: 311 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 370

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +TFN +++  CK   +  A +LL +M +   +PN  TYN LM+G C + K  +A  L   
Sbjct: 371 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 430

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +   G   D V+YNIL++G+CK  ++  A +++  M S G++P   T+  L  GL ++ +
Sbjct: 431 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 490

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  +   M + G++ D  T+T  IDG CK G   +   LF  +   +C      +NC
Sbjct: 491 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 550

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            +D L K  +L  A  +   +    LVP+VVT+ I+I+G C  G+   +  +   M++  
Sbjct: 551 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 610

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +P+V T+ ++I+G        +   +L  M    V P+    +++V   VK
Sbjct: 611 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 662



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 235/454 (51%), Gaps = 10/454 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN+ T++ LI GL    R+ EA  L  ++   GC+P+  TY  LI   C  G T  A+ +
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            +EMA         C PN  TY+ +ID LC+EG +++A  +F +M    + P ++T+N+L
Sbjct: 323 LDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376

Query: 249 IHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           I+G C    W  +    + +M++G  +P++ T+N +M+ LC+  K  +A  LL  +V  G
Sbjct: 377 INGYCKEG-WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + P+  TYN L+DGFC  G++N A  +F SM S G + D  ++  LI+G CK   +E+A 
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            +   MV KGI    VT+  L  G  +I + +    LF+ M  +       T+  F+D L
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 555

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K+  + EA  +   +        +  +  LI+G C++G    + ++   +      PNV
Sbjct: 556 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 615

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            TY I+I GLCN+G++++A  +   M     +P+  T+ +L+   ++     +  +++  
Sbjct: 616 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 675

Query: 548 MKEKKVMPDASIVSIVVD--LLVKNEISLKSLPS 579
           M +    P++ I S ++   +L    I  ++L S
Sbjct: 676 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 709



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 252/542 (46%), Gaps = 34/542 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           EAF +F+ M +     P   +++IL+  L +    +            G  P+  TY +L
Sbjct: 247 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 306

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C IG           +      PN  T+  LI  L  E +I EA  +F K+   G 
Sbjct: 307 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 366

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P +IT+N LING C+ G  + A  L   M  GN      CKPN  TY+ +++GLC+   
Sbjct: 367 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSK 420

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             KA  L  ++ D  + PD VTYN L+ G C     N A  +F  M   G++P   TF  
Sbjct: 421 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 480

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LCK  ++++A+ +L  MV++G+  +  T+  L+DG C +GK      LF +M    
Sbjct: 481 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C     ++N  ++   K+ ++ EA ++  +M+  G+ P+VVT+  L  G     +   +L
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 600

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           K+ + M++ G + +  TYT  I+GLC NG + EA  +  ++       +   Y  L+   
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 660

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG------------LCNDGQMDKARDLF 510
            K+GRL  A+++  ++      PN   Y+ ++ G            L + G +D AR L 
Sbjct: 661 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLS 719

Query: 511 LDMEEN---------AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +  +N            P    ++ L+ G  +     + ++L   M +  + PD +I S
Sbjct: 720 SEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISS 779

Query: 562 IV 563
           I+
Sbjct: 780 II 781



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 244/493 (49%), Gaps = 17/493 (3%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF---T 155
           Y+ L+ C  K+    + F+ + R++   F      + +++  L  ++  ++AA +F    
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNAL-CKNGFVQAAEMFCCKV 220

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
               FG + +V T   L N  CR      A  +FE+M+         C+PN+VTYS +I 
Sbjct: 221 LRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEEN-----CRPNSVTYSILIH 273

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLC+ G +++A  L  +M ++   P   TY  LI   C     ++A ++  EM  +   P
Sbjct: 274 GLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVP 333

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +V T+ +++D LC+  K++EA+ +   M++ G+ P   T+N L++G+C  G +  A +L 
Sbjct: 334 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 393

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ME   CK +  +YN L+ G C+  +  +A  L R +V  G+ P  VTYN L  G  + 
Sbjct: 394 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 453

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            Q+  A  +F+ M   G+  D  T+T  IDGLCK G + +A  +  ++      LD   +
Sbjct: 454 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 513

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LIDG CK G+ K    LF ++     +    T+N  +  L  D ++++A  +   M +
Sbjct: 514 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 573

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN----- 570
               P V+T  +LI G  R  E +   ++L +MK+    P+    +I+++ L  N     
Sbjct: 574 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 633

Query: 571 -EISLKSLPSFLV 582
            E  L S+ SF V
Sbjct: 634 AETILFSMSSFGV 646



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 250/533 (46%), Gaps = 33/533 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+  L +    +       ++   GL P + T+N LIN +CK G V   F  
Sbjct: 333 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +    PN  T+N L++GL   S+  +A  L  ++   G  P+ +TYN L++G C+
Sbjct: 393 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 452

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +A N+F  M +   E      P+  T++ +IDGLCK G +++A  +   M  + I
Sbjct: 453 EGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + D VT+ +LI G C      +   LF  M++     +  TFN  +D L K+ K++EA+ 
Sbjct: 507 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 566

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  M++ G+ P+  T+  L++G C  G+   + ++   M+  GC  +  +Y I+ING C
Sbjct: 567 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 626

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            N  VEEA ++   M S G+ P   TY  L     +  +++ A ++   M ++G   ++ 
Sbjct: 627 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 686

Query: 419 TYTTFIDGLCKNGYIIEAVEL-------FRTL------------RILKCELDIQ-AYNCL 458
            Y+  + G   +   I A  L        R+L             I KC +  +  YN L
Sbjct: 687 IYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFL 746

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           + GLCK GR+  A +L   +    L P+    +I I+  C   + D   +    + +N  
Sbjct: 747 VVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKYDNCLEFMKLVLDNKF 805

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            P   ++  +IHG        +  +L+  +     + +   V+  ++ L+K E
Sbjct: 806 VPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEE 858



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 5/200 (2%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G + +   Y+TL + L +++    A  ++  M  +G       Y T ++ LCKNG+
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 433 IIEAVELF--RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVT 489
            ++A E+F  + LR L   LD      L+   C+   L  A+ +F  +       PN VT
Sbjct: 210 -VQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVT 267

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y+I+I GLC  G++++A  L  +M E    P   T+ +LI     I    K  ++L +M 
Sbjct: 268 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 327

Query: 550 EKKVMPDASIVSIVVDLLVK 569
            K  +P+    +I++D L +
Sbjct: 328 TKACVPNVHTYTILIDRLCR 347


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 247/507 (48%), Gaps = 39/507 (7%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N Y+Y ILI   C+   V    +    ++    + N  T+  LIKGL  E RI +A
Sbjct: 244 GCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDA 303

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++   G  P+V TYN +I+G C++G    AL + + +   NG     C P+  TY
Sbjct: 304 RGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDWTY 357

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +++I GLC  G +D+A+ L          P V+T+ +LI+G C A   ++A R+   M+ 
Sbjct: 358 NSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMIS 416

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
              +  +  + V+++ L K  ++ EA   L+ M   G+ PN  TY +++DG+C +G +  
Sbjct: 417 SNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGA 476

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E+F  ME  GC  +  +Y  LI G  ++K++ +A++L  +M   GI P V+TY TL  
Sbjct: 477 ALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQ 536

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL----------- 439
           G  + H+ ++A +LF+ M+++G+  D + Y    D LCK+G   EA              
Sbjct: 537 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKV 596

Query: 440 ----------------FRTLRILK-----CELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
                           F  + I K     C+ D+  Y+ L+  LCK  +L  A  +   +
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  N+V Y I+I  +  +G+ D A+ LF +M  +   P   T+ + I  + +I   
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRI 716

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   L+ +M+   V PD    +I ++
Sbjct: 717 EEAEHLIGEMERDGVTPDVVTYNIFIN 743



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 241/493 (48%), Gaps = 27/493 (5%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P + T+  LIN +CK  R+         ++ S    +   +  LI  L  + R+ 
Sbjct: 381 ARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLK 440

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA     ++ A G  PNV+TY ++I+G C+ G    AL +F+ M +        C PN  
Sbjct: 441 EAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG------CHPNAW 494

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY ++I GL ++  + KA AL  +M+++ I P V+TY +LI G C  ++++ A RLF EM
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF-EM 553

Query: 269 MDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+Q G+ P    +NV+ D LCK+ + +EA   L   V++GV     TY +L+DGF   G 
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGN 610

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + A  L   M + GCK D  +Y++L+   CK K++ EALS+  +M   G+K  +V Y  
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +   + +  + +HA  LF+EM   G      TYT FI   CK G I EA  L   +    
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG 730

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ------------ 495
              D+  YN  I+G    G +  A+     +      PN  TY ++++            
Sbjct: 731 VTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHY 790

Query: 496 ----GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
               G+ N  +++    L   M ++   P V+T+  +I GF +     +   LL  M  K
Sbjct: 791 VDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850

Query: 552 KVMPDASIVSIVV 564
            + P+  I ++++
Sbjct: 851 DISPNEEIYTMLI 863



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 242/544 (44%), Gaps = 49/544 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A GL PN+ TY  +I+ +CK+G V      F  +      PNA T+ SLI GL  + ++ 
Sbjct: 451 ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG--------NGEI 199
           +A AL TK++  G  P VITY TLI G C+      A  LFE M  NG        N   
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 570

Query: 200 GVVCKP-----------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             +CK                    VTY++++DG  K G  D A  L  +M +E    D+
Sbjct: 571 DALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ L+  LC     NEA  +  +M   GV+ ++V + +I+ E+ K  K D A  L + 
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+  G +P+A TY   +  +C +G+I  AE L G ME  G   D V+YNI ING      
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGY 750

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLF-----LGLFEIHQVEHA-----------LKLFD 406
           ++ A S  + MV    +P   TY  L      + L   H V+ +            +L +
Sbjct: 751 IDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLE 810

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M + G+     TY++ I G CK   + EA  L   +       + + Y  LI   C   
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 870

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
               A      +      P + +Y+ +I GLC++G  D+A+ LF D+       + + + 
Sbjct: 871 LFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWK 930

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           +L  G ++       ++LL  M  +    D+   S++ D       S++     +V E +
Sbjct: 931 ILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTD-------SIREASGSVVSELR 983

Query: 587 GEVG 590
           GE  
Sbjct: 984 GEAA 987



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 213/437 (48%), Gaps = 10/437 (2%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L++ L   G  P+ +TYNT+I   C+ G   IA   F  +     ++      +T T + 
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQM------DTYTCNA 219

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ G C+   + KA  L + M       +  +Y  LI GLC A    EA  L   M+  G
Sbjct: 220 LLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDG 279

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
              ++ T+ +++  LCK  ++ +A  LLD M  RGV P+  TYN ++DG+C  G++  A 
Sbjct: 280 CSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL 339

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   ME  GC  DD +YN LI G C  K ++EA  L    +++G  PTV+T+  L  G 
Sbjct: 340 GIKALMEQNGCNPDDWTYNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGY 398

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +++ AL++   M       D + Y   I+ L K   + EA E    +       ++
Sbjct: 399 CKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV 458

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +IDG CK G +  A E+F  + H    PN  TY  +I GL  D ++ KA  L   
Sbjct: 459 VTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M+E+   P VIT+  LI G  + +E      L   M++  + PD    +++ D L K+  
Sbjct: 519 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 578

Query: 573 SLKSLPSFLVQERQGEV 589
           + ++  SFLV  R+G V
Sbjct: 579 AEEAY-SFLV--RKGVV 592



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 1/325 (0%)

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           +L+  ++ +G+ P  VT+N ++   CK   +  A R   L+ + G++ +  T N L+ G+
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C    + +A  L   M  MGC+ ++ SY ILI G C+ + V EAL L   MV  G    +
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            TY  L  GL +  ++  A  L DEM   GV     TY   IDG CK+G + +A+ +   
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +    C  D   YN LI GLC  G+L  A EL          P V+T+  +I G C   +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D A  +  +M  +    D+  + +LI+  I+     +  E L++M    + P+    + 
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTS 463

Query: 563 VVDLLVKNEISLKSLPSFLVQERQG 587
           ++D   K  +   +L  F + E +G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEG 488



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +E  +A+   R +  K +  +   YN     L      E+  KL+  + ++G+  DT TY
Sbjct: 123 REAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTY 182

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I   CK G +  A   F  LR    ++D    N L+ G C++  L+ A  L   +P 
Sbjct: 183 NTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPL 242

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
                N  +Y I+IQGLC    + +A  L   M  +  + ++ T+ +LI G  +      
Sbjct: 243 MGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHD 302

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              LL +M  + V+P     + ++D   K+
Sbjct: 303 ARGLLDEMPLRGVVPSVWTYNAMIDGYCKS 332


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 256/507 (50%), Gaps = 23/507 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+N +L +L K +           + + GL PN +TYN+L+  +C++G +      
Sbjct: 246 PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKV 305

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + R+   P   T+N L+ G   + +I EA  +  +++     P+V+TYNTLI+G  +
Sbjct: 306 IEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQ 365

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              +    +L EEM     + GV C  N VTY+ I+  +CK+G + +A     +M++  +
Sbjct: 366 WRDSSEVYSLIEEM----DKKGVKC--NAVTYNIILKWMCKKGNMTEATTTLDKMEENGL 419

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD VTYN+LI   C A    +A R+  EM  +G++    T N I+  LC  +K+DEA  
Sbjct: 420 SPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYN 479

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL    +RG   +  +Y  L+ G+    K +RA  L+  M+        ++YN +I G C
Sbjct: 480 LLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLC 539

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           ++++V++A+    EM+  G+ P   TYN +  G      VE A +  +EM  +    D  
Sbjct: 540 QSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVY 599

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T    + GLC+ G + +A++LF TL     ++D+  YN +I  LCK G+ + A++L   +
Sbjct: 600 TCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEM 659

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD----------VITFDML 528
               L P+  TY ++I  L + G++ +A +  L M E+    D          V+T ++ 
Sbjct: 660 EAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVS 719

Query: 529 IH-GFIRINEPSKVNELLHKMKEKKVM 554
            H  F  I    ++NEL ++ K K  M
Sbjct: 720 EHFDFKSIAYSDQINELCNQHKYKDAM 746



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 274/592 (46%), Gaps = 63/592 (10%)

Query: 56  YMLRMHPSPP-PVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINC 105
           + L +HP+   P  S  +L  S+      D    AT +F         PNL T N L+N 
Sbjct: 125 HKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNS 184

Query: 106 FCKIGRVSLGFIAFGRILRSCF----TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
             +    S   +A  ++L+        PN  +FN LI G   ES++ +A     K+  FG
Sbjct: 185 LVRYPSSSSILLA-RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFG 243

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P+ ++YNT+++ L +      A +L  +M +          PN  TY+ ++ G C+ G
Sbjct: 244 CVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG------LSPNKHTYNMLVCGYCRLG 297

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            + +A  +   M   N+ P V TYN L++G C+    +EA R+  EM    V P VVT+N
Sbjct: 298 LLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYN 357

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   + R   E   L++ M ++GV+ NA TYN ++   C  G +  A      ME  
Sbjct: 358 TLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEEN 417

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT-------------- 387
           G   D V+YN LI  YCK  ++ +A  +  EM SKG+K    T NT              
Sbjct: 418 GLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEA 477

Query: 388 ---------------------LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
                                L LG F+  + + AL L+DEM+   +   T TY + I G
Sbjct: 478 YNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGG 537

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LC++  + +A++    +       D   YN +I G C  G ++ A++    +   +  P+
Sbjct: 538 LCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPD 597

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V T NI+++GLC +G ++KA  LF  +       DV+T++ +I    +  +     +LL 
Sbjct: 598 VYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLT 657

Query: 547 KMKEKKVMPDASIVSIVVDLLVK-------NEISLKSLPSFLVQERQGEVGE 591
           +M+ KK+ PD     +++  L          E +LK + S +V ++  ++G+
Sbjct: 658 EMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGK 709


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 234/472 (49%), Gaps = 7/472 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL- 157
           Y  ++N  CK G V    +   ++LR  F  +     SL+        + EA  +F K+ 
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K   C PN +TY+ LI+GLC  G    A  L +EM          C+P+T TY+ +I   
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG------CQPSTRTYTVLIKAK 244

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G  DKA  +  +M  +   P+V TY  LI  LC      EA  +F +M+  G+ P +
Sbjct: 245 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 304

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +TFN +++  CK   +  A +LL +M +   +PN  TYN LM+G C + K  +A  L   
Sbjct: 305 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 364

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +   G   D V+YNIL++G+CK  ++  A +++  M S G++P   T+  L  GL ++ +
Sbjct: 365 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 424

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  +   M + G++ D  T+T  IDG CK G   +   LF  +   +C      +NC
Sbjct: 425 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 484

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            +D L K  +L  A  +   +    LVP+VVT+ I+I+G C  G+   +  +   M++  
Sbjct: 485 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +P+V T+ ++I+G        +   +L  M    V P+    +++V   VK
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 596



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 254/496 (51%), Gaps = 19/496 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLG--FIAFGRILR--SCFTPNAATFNSLIKGLHAESR 146
           GL  ++ T  +L NC     R  LG  F  F ++ +  SC  PN+ T++ LI GL    R
Sbjct: 160 GLDTHVCTSLVLANC----RRDDLGEAFRVFEKMSKEESC-RPNSVTYSILIHGLCEAGR 214

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  L  ++   GC+P+  TY  LI   C  G T  A+ + +EMA         C PN
Sbjct: 215 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK------ACVPN 268

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ +ID LC+EG +++A  +F +M    + P ++T+N+LI+G C    W  +    +
Sbjct: 269 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG-WVVSAFQLL 327

Query: 267 EMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M++G  +P++ T+N +M+ LC+  K  +A  LL  +V  G+ P+  TYN L+DGFC  
Sbjct: 328 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 387

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G++N A  +F SM S G + D  ++  LI+G CK   +E+A  +   MV KGI    VT+
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G  +I + +    LF+ M  +       T+  F+D L K+  + EA  +   +  
Sbjct: 448 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                 +  +  LI+G C++G    + ++   +      PNV TY I+I GLCN+G++++
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +   M     +P+  T+ +L+   ++     +  +++  M +    P++ I S ++ 
Sbjct: 568 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 627

Query: 566 --LLVKNEISLKSLPS 579
             +L    I  ++L S
Sbjct: 628 GFVLSNTAIGARALSS 643



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 253/558 (45%), Gaps = 50/558 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EAF +F+ M +     P   +++IL+  L +    +        +   G  P+  TY +L
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C IG           +      PN  T+  LI  L  E +I EA  +F K+   G 
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 300

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P +IT+N LING C+ G  + A  L   M  GN      CKPN  TY+ +++GLC+   
Sbjct: 301 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSK 354

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             KA  L  ++ D  + PD VTYN L+ G C     N A  +F  M   G++P   TF  
Sbjct: 355 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 414

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LCK  ++++A+ +L  MV++G+  +  T+  L+DG C +GK      LF +M    
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C     ++N  ++   K+ ++ EA ++  +M+  G+ P+VVT+  L  G     +   +L
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           K+ + M++ G + +  TYT  I+GLC NG + EA  +  ++       +   Y  L+   
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 594

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG------------LCNDGQMDKARDLF 510
            K+GRL  A+++  ++      PN   Y+ ++ G            L + G +D AR L 
Sbjct: 595 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLS 653

Query: 511 LDMEEN-------------------------AAAPDVITFDMLIHGFIRINEPSKVNELL 545
            +  +N                            P    ++ L+ G  +     + ++L 
Sbjct: 654 SEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLT 713

Query: 546 HKMKEKKVMPDASIVSIV 563
             M +  + PD +I SI+
Sbjct: 714 QDMVKHGLFPDKAISSII 731



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 244/493 (49%), Gaps = 17/493 (3%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF---T 155
           Y+ L+ C  K+    + F+ + R++   F      + +++  L  ++  ++AA +F    
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNAL-CKNGFVQAAEMFCCKV 154

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
               FG + +V T   L N  CR      A  +FE+M+         C+PN+VTYS +I 
Sbjct: 155 LRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEES-----CRPNSVTYSILIH 207

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLC+ G +++A  L  +M ++   P   TY  LI   C     ++A ++  EM  +   P
Sbjct: 208 GLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVP 267

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +V T+ +++D LC+  K++EA+ +   M++ G+ P   T+N L++G+C  G +  A +L 
Sbjct: 268 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 327

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ME   CK +  +YN L+ G C+  +  +A  L R +V  G+ P  VTYN L  G  + 
Sbjct: 328 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 387

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            Q+  A  +F+ M   G+  D  T+T  IDGLCK G + +A  +  ++      LD   +
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LIDG CK G+ K    LF ++     +    T+N  +  L  D ++++A  +   M +
Sbjct: 448 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN----- 570
               P V+T  +LI G  R  E +   ++L +MK+    P+    +I+++ L  N     
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567

Query: 571 -EISLKSLPSFLV 582
            E  L S+ SF V
Sbjct: 568 AETILFSMSSFGV 580



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 252/549 (45%), Gaps = 49/549 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+  L +    +       ++   GL P + T+N LIN +CK G V   F  
Sbjct: 267 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +    PN  T+N L++GL   S+  +A  L  ++   G  P+ +TYN L++G C+
Sbjct: 327 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 386

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +A N+F  M +   E      P+  T++ +IDGLCK G +++A  +   M  + I
Sbjct: 387 EGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 440

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + D VT+ +LI G C      +   LF  M++     +  TFN  +D L K+ K++EA+ 
Sbjct: 441 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 500

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  M++ G+ P+  T+  L++G C  G+   + ++   M+  GC  +  +Y I+ING C
Sbjct: 501 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 560

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            N  VEEA ++   M S G+ P   TY  L     +  +++ A ++   M ++G   ++ 
Sbjct: 561 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 620

Query: 419 TYTTFIDGL-------------------------------CKNGYIIEAVELFRTLRIL- 446
            Y+  + G                                C + ++   +++   L+I  
Sbjct: 621 IYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRD 680

Query: 447 ---KCELDIQ-AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
              KC +  +  YN L+ GLCK GR+  A +L   +    L P+    +I I+  C   +
Sbjct: 681 EIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCK 739

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            D   +    + +N   P   ++  +IHG        +  +L+  +     + +   V+ 
Sbjct: 740 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTP 799

Query: 563 VVDLLVKNE 571
            ++ L+K E
Sbjct: 800 SIEFLMKEE 808



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 5/200 (2%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G + +   Y+TL + L +++    A  ++  M  +G       Y T ++ LCKNG+
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 433 IIEAVELF--RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP-HGVLVPNVVT 489
            ++A E+F  + LR L   LD      L+   C+   L  A+ +F  +       PN VT
Sbjct: 144 -VQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVT 201

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y+I+I GLC  G++++A  L  +M E    P   T+ +LI     I    K  ++L +M 
Sbjct: 202 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 261

Query: 550 EKKVMPDASIVSIVVDLLVK 569
            K  +P+    +I++D L +
Sbjct: 262 TKACVPNVHTYTILIDRLCR 281


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 250/503 (49%), Gaps = 7/503 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L A GL P+  +Y  +I   CK GR+      F ++      P A  +N++I G  +  R
Sbjct: 9   LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 68

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  L  +L+  GC P+V+++N+++  L +      AL+LFE M           +PN
Sbjct: 69  FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-------AEPN 121

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + TY+ IID LC  G V++A  +  +M+  ++ P+++T N ++  LC A    EA ++F 
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
               +G  P  VT+  ++D L K  ++DEA RL + M+  G   N   Y +L+  F + G
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +     ++F  +   GCK D    N  ++   K  EVE+   ++ ++ S G  P V +Y+
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GL +  Q      +F  M++ G A D R Y   +DG CK+G + +A E+   ++  
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +  +  Y  ++DGL K  RL  A+ LF       +  NVV Y+ +I G    G++D+A
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +  +M +    P+V T++ L+   ++  E ++       MKE K  P+    SI+++ 
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 481

Query: 567 LVKNEISLKSLPSFLVQERQGEV 589
           L + +   K+   +   ++QG V
Sbjct: 482 LCRVQKYNKAFVFWQDMQKQGLV 504



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 237/484 (48%), Gaps = 11/484 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF-----PNLYTYNILINCFCKIGRV 112
           LR     P V SFN +L  L K +  D  L+   +      PN  TYNI+I+  C  GRV
Sbjct: 79  LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRV 138

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
              +     +  +   PN  T N ++  L    ++ EA  +F      GC P+ +TY +L
Sbjct: 139 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 198

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+GL + G    A  LFE+M +           N V Y+++I      G  +    +F +
Sbjct: 199 IDGLGKKGQVDEAYRLFEKMLDAGH------NANPVVYTSLIRNFFIHGRKEDGHKIFKE 252

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +      PD+   N+ +  +  A +  + + +F ++   G  P V ++++++  L K  +
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
             E S +   M Q+G   +A  YN ++DGFC  GK+++A E+   M+    +    +Y  
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +++G  K   ++EA  L+ E  SKGI+  VV Y++L  G  ++ +++ A  + +EM + G
Sbjct: 373 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  +  T+ + +D L K   I EA+  F++++ +KC  +   Y+ LI+GLC+  +   A+
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             +  +    LVPNVVTY  MI GL   G +  A  LF   + N   PD  +F+ LI G 
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552

Query: 533 IRIN 536
              N
Sbjct: 553 SNAN 556



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 253/509 (49%), Gaps = 13/509 (2%)

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           S P   ++N ++        ++       RL   G  P++ ++N ++ C  K  +V    
Sbjct: 49  SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 108

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  +++    PN++T+N +I  L    R+ EA  +  +++     PN++T N +++ L
Sbjct: 109 SLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 167

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C+      A  +FE  A+  G     C P+ VTY ++IDGL K+G VD+A  LF +M D 
Sbjct: 168 CKARKLEEAYKIFES-ASQRG-----CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 221

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
             N + V Y SLI          +  ++F E++ +G +P +   N  MD + K  ++++ 
Sbjct: 222 GHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 281

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             + + +   G  P+  +Y+ L+ G    G+      +F +M+  G   D  +YN +++G
Sbjct: 282 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 341

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +CK+ +V +A  +  EM  K ++PTV TY  +  GL +I +++ A  LF+E +  G+  +
Sbjct: 342 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 401

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              Y++ IDG  K G I EA  +   +       ++  +N L+D L K+  +  A   F 
Sbjct: 402 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 461

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           S+      PN  TY+I+I GLC   + +KA   + DM++    P+V+T+  +I G  ++ 
Sbjct: 462 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +    L  + K    +PDA+  + +++
Sbjct: 522 NITDAYSLFERFKANGGIPDAASFNALIE 550



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 228/451 (50%), Gaps = 30/451 (6%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN--------------- 194
           A   F +LKA G +P+ ++Y ++I  LC+ G    A  LF +M                 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 195 GNGEIGVV--------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           G G  G                C P+ V++++I+  L K+  VD+A +LF  MK ++  P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 120

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  TYN +I  LC      EA R+  EM    + P+++T N+++D LCK RK++EA ++ 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +   QRG  P+  TY +L+DG    G+++ A  LF  M   G   + V Y  LI  +  +
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+   +++E++ +G KP +   NT    +F+  +VE    +F++++  G   D R+Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  I GL K G   E   +F  ++     LD +AYN ++DG CKSG++  A+E+   +  
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P V TY  ++ GL    ++D+A  LF + +      +V+ +  LI GF ++    +
Sbjct: 361 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDE 420

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L +M +K + P+    + ++D LVK E
Sbjct: 421 AYLILEEMMKKGLTPNVYTWNSLLDALVKAE 451



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 199/396 (50%), Gaps = 13/396 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA+ IF+   +   +P  V+ +  L+  L K    D       ++   G   N   Y  L
Sbjct: 175 EAYKIFESASQRGCNPDCVT-YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  F   GR   G   F  ++R    P+    N+ +  +     + +   +F  ++++G 
Sbjct: 234 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V +Y+ LI+GL + G      N+F  M      +      +   Y+ ++DG CK G 
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL------DARAYNAVVDGFCKSGK 347

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           V KA  +  +MK++ + P V TY +++ GL   +  +EA  LF E   +G++ +VV ++ 
Sbjct: 348 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 407

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D   K  ++DEA  +L+ M+++G+ PN  T+N+L+D      +IN A   F SM+ M 
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C  +  +Y+ILING C+ ++  +A   +++M  +G+ P VVTY T+  GL ++  +  A 
Sbjct: 468 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 527

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            LF+  + +G   D  ++   I+G+      +EA +
Sbjct: 528 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 57/123 (46%)

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           AW+ F  L    L P+ V+Y  MI  LC  G++ +A +LF  ME   + P    ++ +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           G+          +LL +++E+  +P     + ++  L K     ++L  F V ++  E  
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121

Query: 591 ESN 593
            S 
Sbjct: 122 SST 124


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 158/545 (28%), Positives = 273/545 (50%), Gaps = 27/545 (4%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK 81
           R + S++ + FR L  R GD   +     + +   M+R  P P    +FNI++    +  
Sbjct: 240 RPSSSAISILFR-LLLRVGDYGSV-----WKLLRGMIRDGPRPCN-HNFNIMILCFCQKG 292

Query: 82  HYDTRLNATGLF--------PNLYTYNILINCFCKIGRVS--LGFIAFGRILRSCFTPNA 131
           +   R+  + LF        P++Y YNILIN +   GR S  LGF+    ++++   P+ 
Sbjct: 293 Y--LRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHL--MIKNGCKPSL 348

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
            TF+++I     E  ++EA  +F  ++  G  PNV  YNTL++G  +      A  L+EE
Sbjct: 349 ITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEE 408

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M +     G+   P+  T++ ++ G  K G    +  LF      ++ PD   Y+  + G
Sbjct: 409 MRDK----GIA--PDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAG 462

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC A   +EA +   +M+++G+ PSVV FN ++    +    D A +   +M+  G+ P+
Sbjct: 463 LCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPS 522

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
           + T ++++ G    G++  A +L   M   G   + V++ +L++GY K  +   A SL+ 
Sbjct: 523 SSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWY 582

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           EM ++GI P  + ++    GL +   VE A + F EM + G   +   Y + I GLC  G
Sbjct: 583 EMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCG 642

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EA++L R +R      DI   N +I+G CK GR+K A++ F  + H  + P+ VTYN
Sbjct: 643 KLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYN 702

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I G C    M  A +    M  +   PD+ T+++ I GF    + S+   +L ++   
Sbjct: 703 TLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762

Query: 552 KVMPD 556
            V+P+
Sbjct: 763 GVVPN 767



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 233/475 (49%), Gaps = 6/475 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P  + +NI+I CFC+ G + +       + + C  P+   +N LI       R  +A
Sbjct: 273 GPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDA 332

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                 +   GC+P++IT++T+I   C  G+ + A  +FE    G  E+G+   PN   Y
Sbjct: 333 LGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFE----GIQEVGL--SPNVAMY 386

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T++ G  K   V +A  L+ +M+D+ I PD  T+N L+ G        ++  LF +   
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             + P    ++V +  LC   ++DEA + L+ M+++G+ P+   +N+++  +   G  + 
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A + +  M   G      + + ++ G  K   ++EA  L  +M+ KG+    V +  L  
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G F++     A  L+ EM+  G+  D   ++ FIDGL K G + EA E F  +       
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   YN LI GLC  G+L  A +L   +    L+P++ T NI+I G C +G+M  A D F
Sbjct: 627 NNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAF 686

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +M      PD +T++ LI G+ ++ +    +E L+KM      PD +  +I + 
Sbjct: 687 AEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQ 741



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 214/453 (47%), Gaps = 23/453 (5%)

Query: 65  PPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V+ +N L++   K       N  Y+  +   G+ P+  T+NIL+    K G+ +  + 
Sbjct: 381 PNVAMYNTLMSGYFKARDVCQANMLYE-EMRDKGIAPDGATFNILVAGNYKYGKEADSYE 439

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F     S   P+ + ++  + GL    ++ EA      +   G  P+V+ +N++I    
Sbjct: 440 LFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYS 499

Query: 178 RTGHTMIALNLFEEMANGNGEI----GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           R G        FE+ A+   +I    G+V  P++ T S+++ GL K+G + +A+ L  +M
Sbjct: 500 RAG--------FEDNAHKAYKIMLMFGLV--PSSSTCSSMLLGLSKKGRLQEARDLLYKM 549

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
            D+ +  + V +  L+ G     D   A  L+ EM  +G+ P  + F+  +D L K   +
Sbjct: 550 IDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLV 609

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           +EA      M ++G  PN   YN+L+ G C  GK++ A +L   M   G   D  + NI+
Sbjct: 610 EEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNII 669

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING+CK   ++ A   + EM   G+ P  VTYNTL  G  ++  +  A +  ++M   G 
Sbjct: 670 INGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGW 729

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  TY   I G C +  I  AV +   L  +    +   YN +++ +C +  L  A  
Sbjct: 730 DPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC-TDMLDRAMV 788

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           L   L     VPNVVT N+++   C  G  +KA
Sbjct: 789 LTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 114/500 (22%), Positives = 204/500 (40%), Gaps = 76/500 (15%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           +  + +  N+L++G        E+  + ++++  G  P+    + L   L R G      
Sbjct: 204 YESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVW 263

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L   M           +P    ++ +I   C++G++  A++L   M      PDV  YN
Sbjct: 264 KLLRGMIRDGP------RPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYN 317

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI+        ++A      M+  G +PS++TF+ I+   C    + EA ++ + + + 
Sbjct: 318 ILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEV 377

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL------------- 353
           G+ PN   YNTLM G+     + +A  L+  M   G   D  ++NIL             
Sbjct: 378 GLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADS 437

Query: 354 ----------------------INGYCKNKEVEEALSLYREMVSKGIKPTVVTYN----- 386
                                 + G C   +++EA+    +M+ KG+ P+VV +N     
Sbjct: 438 YELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAA 497

Query: 387 ------------------------------TLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
                                         ++ LGL +  +++ A  L  +M   G+  +
Sbjct: 498 YSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVN 557

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
              +T  +DG  K G    A  L+  +       D  A++  IDGL K+G ++ A+E F 
Sbjct: 558 KVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFS 617

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +     VPN   YN +I GLCN G++ +A  L  +M +    PD+ T +++I+GF +  
Sbjct: 618 EMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEG 677

Query: 537 EPSKVNELLHKMKEKKVMPD 556
                 +   +M    V PD
Sbjct: 678 RMKSAFDAFAEMHHIGVTPD 697



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 196/427 (45%), Gaps = 6/427 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           E +    NTL+ G   +     +L +   M     E+GV  +P++   S +   L + G 
Sbjct: 205 ESDFSILNTLMRGFMNSEMAYESLEILSRMR----EVGV--RPSSSAISILFRLLLRVGD 258

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
                 L   M  +   P    +N +I   C       A+ L   M     +P V  +N+
Sbjct: 259 YGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNI 318

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +++      +  +A   L LM++ G +P+  T++T++  FC  G +  A ++F  ++ +G
Sbjct: 319 LINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVG 378

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              +   YN L++GY K ++V +A  LY EM  KGI P   T+N L  G ++  +   + 
Sbjct: 379 LSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSY 438

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +LF +     +  D   Y   + GLC  G + EA++    +        + A+N +I   
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAY 498

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            ++G    A + +  +    LVP+  T + M+ GL   G++ +ARDL   M +     + 
Sbjct: 499 SRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNK 558

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           + F +L+ G+ ++ + +  + L ++M+ + + PDA   S  +D L K  +  ++  +F  
Sbjct: 559 VAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSE 618

Query: 583 QERQGEV 589
             ++G V
Sbjct: 619 MSKKGFV 625



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 8/300 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  N   + +L++ + K+G  +     +  +      P+A  F++ I GL     + EA
Sbjct: 553 GLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEA 612

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
              F+++   G  PN   YN+LI+GLC  G    AL L  EM     + G++  P+  T 
Sbjct: 613 YEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMR----QKGLL--PDIFTT 666

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + II+G CKEG +  A   F +M    + PD VTYN+LI G C   D   A     +M  
Sbjct: 667 NIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYA 726

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G  P + T+N+ +   C ++K+  A  +LD ++  GV PN  TYNT+M+  C    ++R
Sbjct: 727 SGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC-TDMLDR 785

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  L   +  M    + V+ N+L++ +CK    E+AL ++ + ++K ++   + Y  +++
Sbjct: 786 AMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKAL-IWGQKLNKLLRADFIGYWLVYI 844



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 149/332 (44%)

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           F+         D    N+L+ G  ++    E+  +   M + GV+PS    +++   L +
Sbjct: 196 FMWANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLR 255

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
                   +LL  M++ G RP    +N ++  FC  G +  AE L   M    C+ D  +
Sbjct: 256 VGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYA 315

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           YNILIN Y       +AL     M+  G KP+++T++T+         V  A K+F+ +Q
Sbjct: 316 YNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQ 375

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G++ +   Y T + G  K   + +A  L+  +R      D   +N L+ G  K G+  
Sbjct: 376 EVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEA 435

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            ++ELF       LVP+   Y++ + GLC  GQ+D+A     DM E    P V+ F+ +I
Sbjct: 436 DSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVI 495

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
             + R       ++    M    ++P +S  S
Sbjct: 496 AAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCS 527



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 9/141 (6%)

Query: 54  FDYMLRMH--PSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINC 105
           FD    MH     P   ++N L+    K         +  ++ A+G  P++ TYNI I  
Sbjct: 683 FDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQG 742

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPN 165
           FC   ++S        ++     PN  T+N+++  +  +  +  A  L  KL      PN
Sbjct: 743 FCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPN 801

Query: 166 VITYNTLINGLCRTGHTMIAL 186
           V+T N L++  C+ G    AL
Sbjct: 802 VVTTNVLLSHFCKQGMPEKAL 822


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 150/454 (33%), Positives = 216/454 (47%), Gaps = 22/454 (4%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           I   C+ P+   FNSL+           A  L  K+   G +P  + YN LI G+C T  
Sbjct: 3   ITEGCY-PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 182 --TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
             +M  + L E   N   E+GVV   N V        LC  G  +KA  +  +M  +   
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVL--NKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFI 119

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD  TY+ +I  LC+A+   +A +LF EM   G+ P V T+  ++D  CK   +++A   
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            D M Q G  PN  TY  L+  +    K++RA E+F  M S GC  + V+Y  LI+G+CK
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 360 NKEVEEALSLYREMVSKGI-----------------KPTVVTYNTLFLGLFEIHQVEHAL 402
             E E+A  +Y  M +  +                 +P VVTY  L  GL + H+V+ A 
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L + M  +G   +   Y   IDG CK G + EA E+F  +    C  ++  Y+ LID L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K  RL  A ++   +      PNVV Y  M+ GLC  G+ D+A  L L MEE    P+V
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +T+  +I GF +     +  ELL  M  K   P+
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 228/471 (48%), Gaps = 16/471 (3%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            +   G+ P++YTY  L++ FCK+G +      F  + +    PN  T+ +LI       
Sbjct: 147 EMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTR 206

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV--- 202
           ++  A  +F  + + GC PN++TY  LI+G C+ G T  A  ++  M N   +I  V   
Sbjct: 207 KLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIY 266

Query: 203 --------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                    +PN VTY  ++DGLCK   V +A+ L   M  E   P+ + Y++LI G C 
Sbjct: 267 FRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCK 326

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
               +EA+ +F +M+  G  P+V T++ ++D+L K++++D A ++L  M++    PN   
Sbjct: 327 VGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVI 386

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y  ++DG C +GK + A  L   ME  GC  + V+Y  +I+G+ K   V+  L L + M 
Sbjct: 387 YTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMT 446

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           SKG  P  +TY  L         ++ A KL +EM++         Y   I+G       +
Sbjct: 447 SKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE--FV 504

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH-GVLVPNVVTYNIM 493
            ++ L   L        +  Y  LID   K+GRL+ A EL   L        N  TY  +
Sbjct: 505 ASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN--TYVSL 562

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           I+ L    ++DKA  L+ DM      P++     LI G +R+ +  +  +L
Sbjct: 563 IESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 229/483 (47%), Gaps = 29/483 (6%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI--M 148
           G +P+   +N L++ +C+ G     +    +++   + P    +N LI G+ +   +  M
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 149 EAAAL----FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           E   L    + ++   G   N +        LC  G    A N+  EM +  G I     
Sbjct: 66  EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMS-KGFI----- 119

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P++ TYS +I  LC    V+KA  LF +MK   I PDV TY +L+   C      +A+  
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F EM   G  P+VVT+  ++    K RK+  A+ + ++M+  G  PN  TY  L+DG C 
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 325 MGKINRAEELFGSMESMGCKHDDV-----------------SYNILINGYCKNKEVEEAL 367
            G+  +A +++  M++      DV                 +Y  L++G CK  +V+EA 
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   M  +G +P  + Y+ L  G  ++ +++ A ++F +M   G + +  TY++ ID L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K+  +  A+++   +    C  ++  Y  ++DGLCK G+   A+ L   +      PNV
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTY  MI G    G++D+  +L   M     AP+ IT+ +LI+           ++LL +
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479

Query: 548 MKE 550
           MK+
Sbjct: 480 MKQ 482



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 225/490 (45%), Gaps = 33/490 (6%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK------NKHYDTRLNATGLFPNL 96
           N     +AF +F  M R +   P V ++  LL    K       +++   +   G  PN+
Sbjct: 134 NASKVEKAFQLFQEMKR-NGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNV 192

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
            TY  LI+ + K  ++S     F  +L +   PN  T+ +LI G        +A  ++ +
Sbjct: 193 VTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYAR 252

Query: 157 LKAFGC-----------------EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           +K                     EPNV+TY  L++GLC+      A +L E M+      
Sbjct: 253 MKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG--- 309

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
              C+PN + Y  +IDG CK G +D+A+ +F +M     +P+V TY+SLI  L      +
Sbjct: 310 ---CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLD 366

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A ++  +M++    P+VV +  ++D LCK  K DEA RL+ +M ++G  PN  TY  ++
Sbjct: 367 LALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMI 426

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DGF   G+++R  EL   M S GC  + ++Y +LIN  C    +++A  L  EM      
Sbjct: 427 DGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWP 486

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
             +  Y  +  G    H+   +L L  E+  DG       Y   ID   K G +  A+EL
Sbjct: 487 KHIGMYRKVIEGFS--HEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALEL 544

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              L           Y  LI+ L  + ++  A++L+  +     VP +     +I+GL  
Sbjct: 545 HEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLR 603

Query: 500 DGQMDKARDL 509
            G+ ++A  L
Sbjct: 604 VGKWEEALQL 613



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 209/439 (47%), Gaps = 42/439 (9%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC--KPNTVTYSTIIDGLC 218
           GC P+ + +N+L++  CR+G    A  L ++M        V+C  +P  V Y+ +I G+C
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKM--------VICGYQPGYVVYNILIGGIC 57

Query: 219 KE---------GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
                      G  ++A    L+M    +  + V   +    LC    + +A  +  EMM
Sbjct: 58  STEDLPSMEVIGLAERAYNEMLEM---GVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMM 114

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G  P   T++ ++  LC   K+++A +L   M + G+ P+  TY TL+D FC +G I 
Sbjct: 115 SKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIE 174

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A   F  M+  GC  + V+Y  LI+ Y K +++  A  ++  M+S G  P +VTY  L 
Sbjct: 175 QARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALI 234

Query: 390 LGLFEIHQVEHALKLFDEMQRDGV-AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
            G  +  + E A +++  M+ D V   D   Y   +D   K                   
Sbjct: 235 DGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELK------------------- 275

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           E ++  Y  L+DGLCK+ ++K A +L  ++      PN + Y+ +I G C  G++D+A++
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +F  M  +  +P+V T+  LI    +        ++L KM E    P+  I + +VD L 
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLC 395

Query: 569 KNEISLKSLPSFLVQERQG 587
           K   + ++    L+ E +G
Sbjct: 396 KVGKTDEAYRLMLMMEEKG 414



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 174/375 (46%), Gaps = 26/375 (6%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M  E   P  + +NSL+H  C + D+  A +L  +M+  G QP  V +N+++  +C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 293 MDE------ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           +        A R  + M++ GV  N           C +GK  +A  +   M S G   D
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             +Y+ +I   C   +VE+A  L++EM   GI P V TY TL     ++  +E A   FD
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           EMQ+DG A +  TYT  I    K   +  A E+F  +    C  +I  Y  LIDG CK+G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 467 RLKFAWELFCSLPHGVL-----------------VPNVVTYNIMIQGLCNDGQMDKARDL 509
             + A +++  + +  +                  PNVVTY  ++ GLC   ++ +ARDL
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              M      P+ I +D LI GF ++ +  +  E+  KM      P+    S ++D L K
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFK 361

Query: 570 N---EISLKSLPSFL 581
           +   +++LK L   L
Sbjct: 362 DKRLDLALKVLTKML 376



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 139/350 (39%), Gaps = 79/350 (22%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K +K  + R     ++  G  PN   Y+ LI+ FCK+G++      
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++L    +PN  T++SLI  L  + R+  A  + TK+    C PNV+ Y  +++GLC+
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  A  L   M          C PN VTY+ +IDG  K G VD+   L   M  +  
Sbjct: 397 VGKTDEAYRLMLMMEEKG------CYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGC 450

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKR---------------------------------LF 265
            P+ +TY  LI+  C A   ++A +                                 L 
Sbjct: 451 APNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLL 510

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNR---------------------------------- 291
            E+ + G  P +  + +++D   K                                    
Sbjct: 511 AELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLAC 570

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           K+D+A +L   M +RG  P       L+ G   +GK   A +L  S+  M
Sbjct: 571 KVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQM 620


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 155/545 (28%), Positives = 256/545 (46%), Gaps = 14/545 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A  + DYM+        V ++N+ + +L  N           ++    + PN  TYN LI
Sbjct: 287 AIELIDYMI-CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N F K G++ +    F  + +   +PN  T+N+LI G        EA  L   ++A G  
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 405

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
            N +TY TL+NGLC+     +A  L E M   +  +G       + Y+ +IDGLCK G +
Sbjct: 406 LNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG------HIAYTVLIDGLCKNGML 459

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+A  L   M  + +NPDV+TY+SLI+G C   +   AK +   M   G+  + + ++ +
Sbjct: 460 DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTL 519

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C++  + EA ++  +M   G   +  T N L+   C  GK+  AE+    M  +G 
Sbjct: 520 IYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 579

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + ++Y+ +INGY    +   A S + +M+  G  P+  TY +L  GL +   +  A K
Sbjct: 580 VPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 639

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
             + +     A D+  Y T +   CK+G + EAV LF  +       D   Y+ L+ GLC
Sbjct: 640 FLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 699

Query: 464 KSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           + G+   A  LF  ++  G L PN V Y  ++ GL   G    A   F +M +    PD 
Sbjct: 700 RKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 759

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           + F+ +I    R  +  K N+    M+   V P+ +  +I++    K +  L+ L  +  
Sbjct: 760 VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYST 819

Query: 583 QERQG 587
             R+G
Sbjct: 820 MMREG 824



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 242/508 (47%), Gaps = 23/508 (4%)

Query: 53  IFDYMLRMHP---SPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
           IF  ++  +P   S P V  F++L+    K    D  +         G  P++YT N+++
Sbjct: 148 IFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMIL 205

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
               K  R  L +  F  +      PN  TFN LI GL  E  + +A  L  +++  G  
Sbjct: 206 ASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV 265

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIIDGLCKE 220
           P ++TYNTL+N  C+ G    A+ L + M         +CK    +  TY+  ID LC  
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYM---------ICKGIEADVCTYNVFIDNLCTN 316

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
               KA  L  +M+ E I+P+ VTYN+LI+G         A ++F EM    + P+ VT+
Sbjct: 317 HRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTY 376

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N ++   C     +EA RLLD M   G+R N  TY TL++G C   K   A+ L   M  
Sbjct: 377 NALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRV 436

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
                  ++Y +LI+G CKN  ++EA+ L   M   G+ P V+TY++L  G   +  ++ 
Sbjct: 437 NDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKS 496

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A ++   M R G+  +   Y+T I   C++G + EA++++  +       D    N L+ 
Sbjct: 497 AKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVS 556

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            LC+ G+L  A +  C +    LVPN +TY+ +I G  + G    A   F DM +    P
Sbjct: 557 SLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 616

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKM 548
              T+  L+ G  +     +  + L+++
Sbjct: 617 SFFTYGSLLKGLCKGGNLVEAKKFLNRL 644



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 257/578 (44%), Gaps = 83/578 (14%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N++LAS+ K+K  +        ++  G+ PN+ T+NILIN  C  G +      
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++  + F P   T+N+L+     + R   A  L   +   G E +V TYN  I+ LC 
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              +  A  L ++M         +  PN VTY+T+I+G  KEG +  A  +F +M   ++
Sbjct: 316 NHRSAKAYLLLKKMRKE------MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT------------------- 279
           +P+ VTYN+LI G CH  D+ EA RL   M   G++ + VT                   
Sbjct: 370 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 429

Query: 280 ----------------FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
                           + V++D LCKN  +DEA +L+  M + GV P+  TY++L++GFC
Sbjct: 430 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 489

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR------------ 371
            +G I  A+E+   M   G   + + Y+ LI  +C++  V EA+ +Y             
Sbjct: 490 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 549

Query: 372 -----------------------EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
                                   M   G+ P  +TY+ +  G   I    +A   FD+M
Sbjct: 550 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM 609

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            + G      TY + + GLCK G ++EA +    L  +   +D   YN L+   CKSG L
Sbjct: 610 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 669

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF-LDMEENAAAPDVITFDM 527
             A  LF  +    ++P+  TY+ ++ GLC  G+   A  LF   M      P+ + +  
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 729

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           L+ G  +   P        +M +K   PD    + ++D
Sbjct: 730 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIID 767



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 222/434 (51%), Gaps = 6/434 (1%)

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
           + F+ LI+    E  I  A   F  +   G +P+V T N ++  + +   T +  +LF E
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M++       +C PN  T++ +I+GLC EG + KA  L  QM++    P +VTYN+L++ 
Sbjct: 224 MSDKG-----IC-PNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
            C    +  A  L   M+ +G++  V T+NV +D LC N +  +A  LL  M +  + PN
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             TYNTL++GF   GKI  A ++F  M       + V+YN LI G+C   + EEAL L  
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            M + G++   VTY TL  GL +  + E A +L + M+ + +      YT  IDGLCKNG
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 457

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + EAV+L   +       D+  Y+ LI+G C+ G +K A E+ C +    LV N + Y+
Sbjct: 458 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 517

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I   C  G + +A  ++  M  N    D  T ++L+    R  +  +  + L  M   
Sbjct: 518 TLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 577

Query: 552 KVMPDASIVSIVVD 565
            ++P++     +++
Sbjct: 578 GLVPNSITYDCIIN 591



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 241/517 (46%), Gaps = 18/517 (3%)

Query: 47   PNEAFCIFDYMLR--MHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYT 98
            P  AF  FD M++   HPS     ++  LL  L K       K +  RL+      +   
Sbjct: 599  PLNAFSFFDDMIKCGQHPS---FFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 655

Query: 99   YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            YN L+   CK G +      F +++++   P++ T++SL+ GL  + + + A  LF    
Sbjct: 656  YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 715

Query: 159  AFGCE-PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G   PN + Y  L++GL + GH   A   FEEM          C P+TV ++ IID  
Sbjct: 716  GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG-----TC-PDTVAFNAIIDSC 769

Query: 218  CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
             + G + KA   F  M+   + P++ TYN L+HG            L+  MM +G+ P  
Sbjct: 770  SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 829

Query: 278  VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            +TF+ ++  L K+   D   +LL  M+  G   +  T+N L++ +   GK+ +A +L   
Sbjct: 830  LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 889

Query: 338  MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            M ++G   D  +YN + NG  K     E+  +  EM+  G+ P    Y TL  G+  +  
Sbjct: 890  MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 949

Query: 398  VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            ++ A KL DEM+  G  +     +  + GL   G   +A+ +   +  ++    I  +  
Sbjct: 950  IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1009

Query: 458  LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            L+   C+  ++  A +L   +    L  +VV YN++I G+C +G    A +L+ +M    
Sbjct: 1010 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1069

Query: 518  AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              P++ T+ +L+      N   +  +LL  ++E+ ++
Sbjct: 1070 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 241/537 (44%), Gaps = 48/537 (8%)

Query: 71   NILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
            N+L++SL ++      + +   ++  GL PN  TY+ +IN +  IG     F  F  +++
Sbjct: 552  NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 611

Query: 125  SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
                P+  T+ SL+KGL     ++EA     +L       + + YNTL+   C++G+   
Sbjct: 612  CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 671

Query: 185  ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF-LQMKDENINPDVV 243
            A+ LF++M   N        P++ TYS+++ GLC++G    A  LF   M    + P+ V
Sbjct: 672  AVALFDKMVQNN------VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 725

Query: 244  TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
             Y  L+ GL  A     A   F EMM +G  P  V FN I+D   +  +M +A+     M
Sbjct: 726  MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785

Query: 304  VQRGVRPNACTYNTLMDGFCLMGKINR--------------------------------- 330
               GV PN  TYN L+ GF     + R                                 
Sbjct: 786  RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845

Query: 331  --AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
                +L G M   G   D  ++NILIN Y ++ ++ +A  L   M + G+ P   TYN +
Sbjct: 846  DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 905

Query: 389  FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
            F GL +      +  +  EM  +GV      Y T I+G+C+ G I  A +L   +  L  
Sbjct: 906  FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965

Query: 449  ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
                 A + ++ GL   G+ + A  +   +    L+P + T+  ++   C D ++ +A  
Sbjct: 966  GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025

Query: 509  LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            L   ME      DV+ +++LI G     + +   EL  +M+ + + P+ +  +++VD
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1082



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 177/363 (48%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +C      +  +I    KEG +D A   F  +      P V T N ++  +         
Sbjct: 158 LCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 217

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             LF EM D+G+ P+V TFN++++ LC    + +A  LL  M + G  P   TYNTL++ 
Sbjct: 218 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +C  G+   A EL   M   G + D  +YN+ I+  C N    +A  L ++M  + I P 
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            VTYNTL  G  +  ++  A ++F+EM +  ++ +  TY   I G C  G   EA+ L  
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +      L+   Y  L++GLCK  + + A  L   +    +V   + Y ++I GLC +G
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 457

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +D+A  L  +M ++   PDVIT+  LI+GF R+       E++ +M    ++ +  I S
Sbjct: 458 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYS 517

Query: 562 IVV 564
            ++
Sbjct: 518 TLI 520



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 221/470 (47%), Gaps = 7/470 (1%)

Query: 87   LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
            +N  G   + +T N+L++  C+ G++         + R    PN+ T++ +I G  +   
Sbjct: 539  MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 598

Query: 147  IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             + A + F  +   G  P+  TY +L+ GLC+ G+ + A      +    G +      +
Sbjct: 599  PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV------D 652

Query: 207  TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +V Y+T++   CK G + +A ALF +M   N+ PD  TY+SL+ GLC       A  LF 
Sbjct: 653  SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 712

Query: 267  EMMDQGVQ-PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
              M +G   P+ V +  ++D L K      A    + M+++G  P+   +N ++D     
Sbjct: 713  TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 772

Query: 326  GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            G++ +A + F +M   G   +  +YNIL++G+ K + +   LSLY  M+ +GI P  +T+
Sbjct: 773  GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 832

Query: 386  NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            ++L LGL +    +  +KL  +M  +G  AD  T+   I+   ++G + +A +L   +  
Sbjct: 833  HSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNT 892

Query: 446  LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            L    D   YN + +GL K    + +  +   +    ++P    Y  +I G+C  G +  
Sbjct: 893  LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 952

Query: 506  ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            A  L  +ME        +    ++ G +   +      +L  M   +++P
Sbjct: 953  AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1002



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 6/314 (1%)

Query: 261 AKRLFIEMMDQ----GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           +K +F  +MD        PSV  F++++    K   +D A    +L+   G +P+  T N
Sbjct: 145 SKSIFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCN 202

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++       +      LF  M   G   +  ++NILING C    +++A +L ++M   
Sbjct: 203 MILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEEN 262

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G  PT+VTYNTL     +  + + A++L D M   G+ AD  TY  FID LC N    +A
Sbjct: 263 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 322

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
             L + +R      +   YN LI+G  K G++  A ++F  +    L PN VTYN +I G
Sbjct: 323 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 382

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C+ G  ++A  L   ME      + +T+  L++G  +  +      LL +M+   ++  
Sbjct: 383 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 442

Query: 557 ASIVSIVVDLLVKN 570
               ++++D L KN
Sbjct: 443 HIAYTVLIDGLCKN 456



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 18/302 (5%)

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM-----------------GKIN 329
           L K R  D A  +L  + Q G+   +  +  LMD + L                  G I+
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKS-IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 180

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A E F  +  +G K    + N+++    K+K  E   SL+REM  KGI P V T+N L 
Sbjct: 181 YAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 240

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL     ++ A  L  +M+ +G      TY T ++  CK G    A+EL   +     E
Sbjct: 241 NGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE 300

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+  YN  ID LC + R   A+ L   +   ++ PN VTYN +I G   +G++  A  +
Sbjct: 301 ADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQV 360

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           F +M +   +P+ +T++ LI G   + +  +   LL  M+   +  +      +++ L K
Sbjct: 361 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK 420

Query: 570 NE 571
           +E
Sbjct: 421 HE 422



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%)

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G I  AVE F  + ++  +  +   N ++  + K  R +  W LF  +    + PNV 
Sbjct: 175 KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 234

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           T+NI+I GLC +G + KA +L   MEEN   P ++T++ L++ + +        EL+  M
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKS 576
             K +  D    ++ +D L  N  S K+
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKA 322


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 240/485 (49%), Gaps = 36/485 (7%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCK 108
           Y+ R   + P + + N +L  L K +        +D  L   GL P++ TYN LIN    
Sbjct: 140 YVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLR-RGLVPSVVTYNTLINACRF 198

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            G V+     + +++     PN  T+ ++I  L  E  I +A  LF  +K  G +PN  T
Sbjct: 199 QGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYT 258

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++G C+      A+ L++E+            PN V ++T+IDG CK     +AK 
Sbjct: 259 YNVLMSGHCQRDDVNSAVVLYQELLKSG------LNPNAVIFTTLIDGFCKAKRFSEAKG 312

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +FL+M    + P V  YNSL+ G   + +  EA  L+ EM   G+ P   T ++++  LC
Sbjct: 313 MFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLC 372

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
              +M  A R L  + + GV  NA  YN L+D +C +G +  A      M  +G + + V
Sbjct: 373 DGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVV 432

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           SY+ LI+G+ K  +++ A+++Y EMV+KGI+P VVTY  L  G  +   ++ A +L  EM
Sbjct: 433 SYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEM 492

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY--NCLIDGLCKSG 466
             +G++ +  T +  +DGLC+   + EAV        LKC  DI +   N  I+  C   
Sbjct: 493 IENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCS-DIHSVFSNFTIEEEC--- 548

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                           L+PN V Y  +I GL  DGQ  +A  LF  M ++   PD  T+ 
Sbjct: 549 ----------------LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYT 592

Query: 527 MLIHG 531
           +LI G
Sbjct: 593 LLIRG 597



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 230/449 (51%), Gaps = 12/449 (2%)

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L S  T  A     L+  L     + EA  +F +L+     P +   N +++GL +    
Sbjct: 111 LSSTSTTPAPALGVLVIALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRP 167

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  LF+EM       G+V  P+ VTY+T+I+    +G V KA+ ++ QM  + I+P+V
Sbjct: 168 GCAWELFDEMLRR----GLV--PSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNV 221

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTY ++I  LC      +A+RLF  M + G+QP+  T+NV+M   C+   ++ A  L   
Sbjct: 222 VTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQE 281

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           +++ G+ PNA  + TL+DGFC   + + A+ +F  M   G       YN L++G  ++  
Sbjct: 282 LLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGN 341

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            +EAL+LY+EM   G+ P   T + +  GL +  Q+  A +    +Q DGV  +   Y  
Sbjct: 342 AQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNA 401

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            ID  C+ G + EA+     +  +  E ++ +Y+ LIDG  K G+++ A  ++  +    
Sbjct: 402 LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKG 461

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + PNVVTY  +I G   +G +D A  L  +M EN  +P+ IT  +L+ G  R N   +V 
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCREN---RVQ 518

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           E +  + E   +  + I S+  +  ++ E
Sbjct: 519 EAVRFVMEYSGLKCSDIHSVFSNFTIEEE 547



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 184/373 (49%), Gaps = 27/373 (7%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ PN YTYN+L++  C+   V+   + +  +L+S   PNA  F +LI G     R
Sbjct: 247 MKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKR 306

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA  +F ++  FG  P V  YN+L++G  R+G+   AL L++EM      +G+   P+
Sbjct: 307 FSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMT----RLGLC--PD 360

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             T S ++ GLC  G +  A      ++++ +N +   YN+LI   C   +  EA     
Sbjct: 361 EFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCT 420

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M + G++P+VV+++ ++D   K  KM  A  +   MV +G+ PN  TY  L+ G    G
Sbjct: 421 RMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 480

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK------- 379
            I+ A  L   M   G   + ++ ++L++G C+   V+EA+    E    G+K       
Sbjct: 481 GIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEY--SGLKCSDIHSV 538

Query: 380 ------------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
                       P  V Y TL  GL+   Q   A KLF  M++ G+  D+ TYT  I G 
Sbjct: 539 FSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQ 598

Query: 428 CKNGYIIEAVELF 440
           C  GY++ A+ L+
Sbjct: 599 CMLGYVLNAMMLY 611



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 181/417 (43%), Gaps = 70/417 (16%)

Query: 32  FRDLTTREGDINVITPNEAFC-------------IFDYMLRMHPSPPPVSSFNILLASLA 78
           +  +  ++ D NV+T     C             +FD M +     P   ++N+L++   
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAM-KEAGMQPNQYTYNVLMSGHC 267

Query: 79  KNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           +    ++       L  +GL PN   +  LI+ FCK  R S     F  + R    P   
Sbjct: 268 QRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVP 327

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA------- 185
            +NSL+ G        EA AL+ ++   G  P+  T + ++ GLC  G   +A       
Sbjct: 328 VYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGV 387

Query: 186 ----------------------LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
                                  NL E +A       V  +PN V+YS++IDG  K G +
Sbjct: 388 QEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKM 447

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             A A++ +M  + I P+VVTY +LIHG       + A RL  EM++ G+ P+ +T +V+
Sbjct: 448 QIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVL 507

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVR-------------------PNACTYNTLMDGFCL 324
           +D LC+  ++ EA R +  M   G++                   PN+  Y TL+ G  L
Sbjct: 508 VDGLCRENRVQEAVRFV--MEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYL 565

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            G+   A +LF  M   G   D  +Y +LI G C    V  A+ LY +M+  G+KPT
Sbjct: 566 DGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 108/225 (48%), Gaps = 3/225 (1%)

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           ++EAL ++R + +    P +   N +  GL +  +   A +LFDEM R G+     TY T
Sbjct: 135 LDEALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNT 191

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            I+     G + +A E++  +   + + ++  Y  +I  LC+ G +  A  LF ++    
Sbjct: 192 LINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAG 251

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + PN  TYN+++ G C    ++ A  L+ ++ ++   P+ + F  LI GF +    S+  
Sbjct: 252 MQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAK 311

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +  +M    V P   + + ++D   ++  + ++L  +    R G
Sbjct: 312 GMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG 356


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/545 (27%), Positives = 267/545 (48%), Gaps = 14/545 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILI 103
           A C+ + M R       + ++NI++  L + K          R+    L P+  TYN LI
Sbjct: 208 ALCVLEDMER-DSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLI 266

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N F   G+++     F  +LR    P+ AT+ ++I G     RI +A ++ ++++  G  
Sbjct: 267 NGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVM 326

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ +TY+ L+NG C+      AL+L  ++ +    I      N    + +IDG C+ G +
Sbjct: 327 PSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITI------NKTMCTILIDGFCQVGEI 380

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            KAK +   M ++ I+PDVVTY++LI+G+C     +E K +   M   G+ P+ V +  +
Sbjct: 381 SKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   CK   +  A +    + +RG+  N   +N L+  F   G I  AE     M  M  
Sbjct: 441 ICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNI 500

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + VS+N +I+ YC   ++ EA S+Y +MV  G  P V TY  L  GL +   +  A +
Sbjct: 501 SFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQ 560

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
               +     A D +T+   + G+CK G + EA+++   +    C  DI  Y  L+ G C
Sbjct: 561 FMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFC 620

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAPDV 522
           + G++  A  +   +    +VP+ V Y  ++ GL N+GQ+  A  +F ++  +     D 
Sbjct: 621 RKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADC 680

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
           I ++ L++G+++    + +  ++  M + +V P+++  +I++   VK     KSL  +  
Sbjct: 681 IAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKY 740

Query: 583 QERQG 587
             R+G
Sbjct: 741 MVRKG 745



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 245/525 (46%), Gaps = 16/525 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
           N A C+F++MLR     P V+++  ++    +N+  D  L+       TG+ P+  TY+ 
Sbjct: 276 NHARCVFNHMLR-QTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSA 334

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N +CK+  +         +     T N      LI G      I +A  +   +   G
Sbjct: 335 LLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDG 394

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+V+TY+ LING+CR    M  ++  +E+ +   + G++  PN V Y+T+I   CK G
Sbjct: 395 IDPDVVTYSALINGMCR----MAKMHETKEILSRMQKSGIL--PNDVLYTTLICYYCKAG 448

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
           +V  A   F+ +    +  + V +N+L+          EA+     M    +  + V+FN
Sbjct: 449 YVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFN 508

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+D  C   K+ EA  + D MV+ G  PN CTY  L+ G C  G + +A++    +  +
Sbjct: 509 CIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI 568

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               D+ ++N L+ G CK   ++EAL +  +MV     P + TY  L  G     ++  A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLI 459
           L +   M   GV  DT  YT  ++GL   G +  A  +F+ + I K  L  D  AYN L+
Sbjct: 629 LVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEI-ICKEGLYADCIAYNSLM 687

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +G  K G +     +   +    + PN  +YNI++ G    GQ  K+  L+  M      
Sbjct: 688 NGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR 747

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           PD +T+ +LI G           + L KM  + + PD  +  I++
Sbjct: 748 PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILI 792



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 229/477 (48%), Gaps = 18/477 (3%)

Query: 51   FCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILIN 104
            FC+ D      PS     +FN LL  + K    D  L+           P+++TY IL++
Sbjct: 563  FCLLDI-----PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLS 617

Query: 105  CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF-GCE 163
             FC+ G++    +    +L     P+   +  L+ GL  E ++  A+ +F ++    G  
Sbjct: 618  GFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLY 677

Query: 164  PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
             + I YN+L+NG  + G+      +  +M            PN+ +Y+ ++ G  K G  
Sbjct: 678  ADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNE------VYPNSASYNILMHGYVKRGQF 731

Query: 224  DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             K+  L+  M  + I PD VTY  LI GL      + A +   +M+ +G+ P  + F+++
Sbjct: 732  SKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDIL 791

Query: 284  MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
            +    +  KM  A RL + M    + P++ T++ +++G      ++++ E+   M  +G 
Sbjct: 792  ITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGL 851

Query: 344  KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
            + +   Y  L+N  C+  E++ A  L  EM + GI P  V  +++  GL    ++E A+ 
Sbjct: 852  QPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVI 911

Query: 404  LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
            +F  M R G+     T+TT +  LCK   I +A+ L R + + + ++D+ +YN LI GLC
Sbjct: 912  VFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLC 971

Query: 464  KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            K   +  A +L+  +    L PNV TY  +   + + G+M    +L  D+EE    P
Sbjct: 972  KDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 244/502 (48%), Gaps = 17/502 (3%)

Query: 93  FP-NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           FP ++ T NIL+N  C  G          + ++SC   N+AT+N+++     + R   A 
Sbjct: 151 FPLDVTTCNILLNSLCTNGEFRKAEDMLQK-MKSCCLSNSATYNTILHWYVKKGRFKAAL 209

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +   ++    + ++ TYN +I+ LCR   +  A  L + M   +        P+  TY+
Sbjct: 210 CVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDD------LTPDECTYN 263

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+G   EG ++ A+ +F  M  + + P V TY ++I G C     ++A  +  EM   
Sbjct: 264 TLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEIT 323

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV---QRGVRPNACTYNTLMDGFCLMGKI 328
           GV PS +T++ +++  CK   +  A   LDLMV    RG+  N      L+DGFC +G+I
Sbjct: 324 GVMPSELTYSALLNGYCKVSMLGPA---LDLMVDLKSRGITINKTMCTILIDGFCQVGEI 380

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           ++A+++  SM   G   D V+Y+ LING C+  ++ E   +   M   GI P  V Y TL
Sbjct: 381 SKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
                +   V+ ALK F ++ R G+ A+   +   +    + G I EA    + +  +  
Sbjct: 441 ICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNI 500

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             +  ++NC+ID  C  G++  A+ ++  +      PNV TY  +++GLC  G + +A+ 
Sbjct: 501 SFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQ 560

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
               + +  +A D  TF+ L+ G  +     +  ++  KM +   +PD    +I++    
Sbjct: 561 FMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFC 620

Query: 569 KNEISLKSLPSFLVQERQGEVG 590
           +     K LP+ ++ +   E G
Sbjct: 621 RKG---KILPALVMLQMMLEKG 639



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 240/467 (51%), Gaps = 13/467 (2%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           + Y +R+N +    N  ++N +I+ +C  G++   F  +  ++R   +PN  T+ +L++G
Sbjct: 492 RQYMSRMNISF---NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRG 548

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
           L     +++A      L       +  T+N L+ G+C+ G    AL++ E+M   N    
Sbjct: 549 LCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN---- 604

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C P+  TY+ ++ G C++G +  A  +   M ++ + PD V Y  L++GL +      
Sbjct: 605 --CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKA 662

Query: 261 AKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           A  +F E++  +G+    + +N +M+   K   ++   R++  M Q  V PN+ +YN LM
Sbjct: 663 ASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILM 722

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
            G+   G+ +++  L+  M   G + D+V+Y +LI G  +   ++ A+    +MV +GI 
Sbjct: 723 HGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIF 782

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  + ++ L     E  ++ +AL+LF+ M+   ++  ++T++  I+GL +  Y+ ++ E+
Sbjct: 783 PDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEV 842

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              +  +  + +   Y  L++  C+ G +  A+ L   +    +VP  V  + +I+GLC 
Sbjct: 843 LHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR 902

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            G++++A  +F +M  +   P V TF  L+H   +    SK+ + LH
Sbjct: 903 CGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCK---ESKIADALH 946



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 24/267 (8%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            + A  +F+ M  +H SP    +F+ ++  L +  + D        +   GL PN   Y  
Sbjct: 802  HNALRLFNCMKCLHLSPSS-KTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIA 860

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            L+N  C++G +   F     +      P     +S+I+GL    ++ EA  +F+ +   G
Sbjct: 861  LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSG 920

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC--KPNTVTYSTIIDGLCK 219
              P V T+ TL++ LC+      AL+L   M         +C  K + V+Y+ +I GLCK
Sbjct: 921  MVPTVATFTTLMHSLCKESKIADALHLKRLME--------LCRLKVDVVSYNVLITGLCK 972

Query: 220  EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            +  +  A  L+ +MK + + P+V TY +L   +         + L  ++ ++G+ P+   
Sbjct: 973  DKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAFKQ 1032

Query: 280  FNVIMDELCKNRKMDEASRLLDLMVQR 306
               +       R+M++A R L+ M++R
Sbjct: 1033 LENL------ERRMEDAIRRLN-MIRR 1052



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 1/242 (0%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           + V + +LI  Y K ++V +A      M   G K + V  N++   L E  + ++     
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFL 143

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            E        D  T    ++ LC NG   +A ++ + ++   C  +   YN ++    K 
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSC-CLSNSATYNTILHWYVKK 202

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           GR K A  +   +    +  ++ TYNIMI  LC   +  +A  L   M ++   PD  T+
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           + LI+GF    + +    + + M  + ++P  +  + ++D   +N    K+L      E 
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI 322

Query: 586 QG 587
            G
Sbjct: 323 TG 324


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 233/469 (49%), Gaps = 20/469 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  ++YTY I+++ FCK G +      F  +     TPN  T+ +LI       ++  A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC------- 203
             LF  + + GC PN++TY+ LI+G C+ G    A  +FE M  G+ ++  V        
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMC-GSKDVPDVDMYFKQYD 631

Query: 204 -----KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                +PN V Y  ++DG CK   V++A+ L   M  E   P+ + Y++LI GLC     
Sbjct: 632 DDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 691

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA+ +  EM + G   ++ T++ ++D   K ++ D AS++L  M++    PN   Y  +
Sbjct: 692 DEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 751

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +DG C +GK + A +L   ME  GC+ + V+Y  +I+G+ +  ++E  L L   M SKG+
Sbjct: 752 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGV 811

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P  VTY  L     +   ++ A  L +EM++         Y   I+G   N   IE++ 
Sbjct: 812 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLG 869

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP--HGVLVPNVVTYNIMIQG 496
           L   +        +  Y  L+D L K+ RL+ A  L   +      LV    TYN +I+ 
Sbjct: 870 LLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 929

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           LC   ++DKA  LF +M +    P++ TF  LI G  R    SK++E L
Sbjct: 930 LCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFR---NSKISEAL 975



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 241/508 (47%), Gaps = 29/508 (5%)

Query: 86  RLNATGLFPNLYTYNILINCFC----KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           R+ AT   PN+ TY+ L+ C C    ++GR     +    ++  C+ P+   FNSL+   
Sbjct: 327 RMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR--VLNMMMMEGCY-PSPKIFNSLVHAY 382

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA--LNLFEEMANGNGEI 199
                   A  L  K+   G  P  + YN LI  +C    ++    L L E+  +     
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLAT 442

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           GVV   N +  S+    LC  G  +KA ++  +M  +   PD  TY+ ++  LC+A+   
Sbjct: 443 GVVL--NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKME 500

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            A  LF EM   G+   V T+ +++D  CK   +++A +  + M + G  PN  TY  L+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGI 378
             +    K++ A ELF +M S GC  + V+Y+ LI+G+CK  ++E+A  ++  M  SK +
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDV 620

Query: 379 ----------------KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
                           +P VV Y  L  G  ++H+VE A KL D M  +G   +   Y  
Sbjct: 621 PDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDA 680

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDGLCK G + EA E+   +        +  Y+ LID   K  R   A ++   +    
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
             PNVV Y  MI GLC  G+ D+A  L   MEE    P+V+T+  +I GF RI +     
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCL 800

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           ELL +M  K V P+     +++D   KN
Sbjct: 801 ELLERMGSKGVAPNYVTYRVLIDHCCKN 828



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 233/493 (47%), Gaps = 32/493 (6%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+L+  +C+ G  S+     GR+    F P+ +T+N LI+       +  A+ +  ++  
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
                +  T       LC+ G    AL L E       E  V   P+TV Y+ +I GLC+
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLMET------ENFV---PDTVFYTKLISGLCE 314

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
               ++A     +M+  +  P+VVTY++L+ G  +       KR+   MM +G  PS   
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC------LMGKINRAEE 333
           FN ++   C +     A +LL  MV+ G  P    YN L+   C          +  AE+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEK 434

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            +  M + G   + ++ +      C   + E+A S+ REM+ +G  P   TY+ +   L 
Sbjct: 435 AYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLC 494

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              ++E A  LF+EM+R G+ AD  TYT  +D  CK G I +A + F  +R + C  ++ 
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--- 510
            Y  LI    K+ ++ +A ELF ++     +PN+VTY+ +I G C  GQM+KA  +F   
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM 614

Query: 511 --------LDM------EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
                   +DM      ++N+  P+V+ +  L+ GF +++   +  +LL  M  +   P+
Sbjct: 615 CGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPN 674

Query: 557 ASIVSIVVDLLVK 569
             +   ++D L K
Sbjct: 675 QIVYDALIDGLCK 687



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 244/527 (46%), Gaps = 37/527 (7%)

Query: 55  DYMLRMHPSP--PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D++ RM  +   P V +++ LL        L + K     +   G +P+   +N L++ +
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME------AAALFTKLKAF 160
           C  G  S  +    ++++   TP    +N LI  +  +   +       A   ++++ A 
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLAT 442

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   N I  ++    LC  G    A ++  EM  G G I     P+T TYS ++  LC  
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTSTYSKVLGYLCNA 496

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             ++ A  LF +MK   +  DV TY  ++   C A    +A++ F EM + G  P+VVT+
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
             ++    K +K+  A+ L + M+  G  PN  TY+ L+DG C  G++ +A ++F  M  
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCG 616

Query: 339 -------ESMGCKHDD--------VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                  +    ++DD        V Y  L++G+CK   VEEA  L   M  +G +P  +
Sbjct: 617 SKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQI 676

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            Y+ L  GL ++ +++ A ++  EM   G  A   TY++ ID   K      A ++   +
Sbjct: 677 VYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 736

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C  ++  Y  +IDGLCK G+   A++L   +      PNVVTY  MI G    G++
Sbjct: 737 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKI 796

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           +   +L   M     AP+ +T+ +LI    +       + LL +MK+
Sbjct: 797 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 843



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 10/298 (3%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           +  L + +     ++  G    LYTY+ LI+ + K+ R  L      ++L +   PN   
Sbjct: 688 VGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 747

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +  +I GL    +  EA  L   ++  GC+PNV+TY  +I+G  R G     L L E M 
Sbjct: 748 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM- 806

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
              G  GV   PN VTY  +ID  CK G +D A  L  +MK  +       Y  +I G  
Sbjct: 807 ---GSKGVA--PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF- 860

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV--QRGVRPN 311
              ++ E+  L  E+      P +  + +++D L K ++++ A RLL+ +      +   
Sbjct: 861 -NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDY 919

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           + TYN+L++  CL  K+++A  LF  M   G   +  ++  LI G  +N ++ EAL L
Sbjct: 920 SSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLL 977



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 119/284 (41%), Gaps = 47/284 (16%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H  P  + +++ L+    K K  D      +++      PN+  Y  +I+  CK+G+   
Sbjct: 704 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 763

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            +     +      PN  T+ ++I G     +I     L  ++ + G  PN +TY  LI+
Sbjct: 764 AYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLID 823

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-----GFVD----- 224
             C+ G   +A NL EEM   +         +   Y  +I+G  KE     G +D     
Sbjct: 824 HCCKNGALDVAHNLLEEMKQTHWPT------HAAGYRKVIEGFNKEFIESLGLLDEIGQD 877

Query: 225 -----------------KAKALFLQMK--------DENINPDVVTYNSLIHGLCHANDWN 259
                            KA+ L + ++           +     TYNSLI  LC AN  +
Sbjct: 878 DTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVD 937

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           +A RLF EM  +GV P + TF  ++  L +N K+ EA  LLD +
Sbjct: 938 KAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFI 981



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/400 (20%), Positives = 154/400 (38%), Gaps = 77/400 (19%)

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN+L+  +   +D    + L  ++ D   +      NV++ + C++     A   L  + 
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227

Query: 305 QRGVRPNACTYNTL--------------------------MDGFCL------MGKINRAE 332
               RP+  TYN L                          MDGF L      + K+ +  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWR 287

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E    ME+     D V Y  LI+G C+    EEA+     M +    P VVTY+TL  G 
Sbjct: 288 EALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC---- 448
               Q+    ++ + M  +G     + + + +   C +G    A +L +  +++KC    
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK--KMVKCGHTP 405

Query: 449 ------------------------ELDIQAYNCLIDG---------------LCKSGRLK 469
                                   EL  +AY+ ++                 LC +G+ +
Sbjct: 406 GYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYE 465

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+ +   +     +P+  TY+ ++  LCN  +M+ A  LF +M+      DV T+ +++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             F +     +  +  ++M+E    P+    + ++   +K
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 13/275 (4%)

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS-----YNILINGYCK 359
           Q G +  +  YN L+D           EEL   +     + DD        N+L+  YC+
Sbjct: 158 QIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQI-----RDDDKEVFGEFLNVLVRKYCR 212

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           +     AL     +     +P+  TYN L     +   ++ A  +  EM    +  D  T
Sbjct: 213 SGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFT 272

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
              +   LCK G   EA+ L  T   +    D   Y  LI GLC++   + A +    + 
Sbjct: 273 LRCYAYSLCKVGKWREALTLMETENFVP---DTVFYTKLISGLCEASLFEEAMDFLNRMR 329

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
               +PNVVTY+ ++ G  N  Q+ + + +   M      P    F+ L+H +    + S
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
              +LL KM +    P   + +I++  +  ++ SL
Sbjct: 390 YAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSL 424


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 234/472 (49%), Gaps = 7/472 (1%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL- 157
           Y  ++N  CK G V    +   ++LR  F  +     SL+        + EA  +F K+ 
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 233

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K   C PN +TY+ LI+GLC  G    A  L +EM          C+P+T TY+ +I   
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG------CQPSTRTYTVLIKAK 287

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C  G  DKA  +  +M  +   P+V TY  LI  LC      EA  +F +M+  G+ P +
Sbjct: 288 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 347

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +TFN +++  CK   +  A +LL +M +   +PN  TYN LM+G C + K  +A  L   
Sbjct: 348 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 407

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +   G   D V+YNIL++G+CK  ++  A +++  M S G++P   T+  L  GL ++ +
Sbjct: 408 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 467

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  +   M + G++ D  T+T  IDG CK G   +   LF  +   +C      +NC
Sbjct: 468 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNC 527

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
            +D L K  +L  A  +   +    LVP+VVT+ I+I+G C  G+   +  +   M++  
Sbjct: 528 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 587

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +P+V T+ ++I+G        +   +L  M    V P+    +++V   VK
Sbjct: 588 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVK 639



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 235/454 (51%), Gaps = 10/454 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           PN+ T++ LI GL    R+ EA  L  ++   GC+P+  TY  LI   C  G T  A+ +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            +EMA         C PN  TY+ +ID LC+EG +++A  +F +M    + P ++T+N+L
Sbjct: 300 LDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 353

Query: 249 IHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           I+G C    W  +    + +M++G  +P++ T+N +M+ LC+  K  +A  LL  +V  G
Sbjct: 354 INGYCKEG-WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + P+  TYN L+DGFC  G++N A  +F SM S G + D  ++  LI+G CK   +E+A 
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            +   MV KGI    VT+  L  G  +I + +    LF+ M  +       T+  F+D L
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 532

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K+  + EA  +   +        +  +  LI+G C++G    + ++   +      PNV
Sbjct: 533 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 592

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            TY I+I GLCN+G++++A  +   M     +P+  T+ +L+   ++     +  +++  
Sbjct: 593 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 652

Query: 548 MKEKKVMPDASIVSIVVD--LLVKNEISLKSLPS 579
           M +    P++ I S ++   +L    I  ++L S
Sbjct: 653 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 686



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 226/443 (51%), Gaps = 6/443 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN  TY+ILI+  C+ GR+   F     ++     P+  T+  LIK         +A  +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++    C PNV TY  LI+ LCR G    A  +F +M         +C P  +T++ +
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGIITFNAL 353

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I+G CKEG+V  A  L   M+  N  P++ TYN L+ GLC  +   +A  L   ++D G+
Sbjct: 354 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P  VT+N+++D  CK  +++ A  + + M   G+ P+  T+  L+DG C +G++ +A  
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           + GSM   G   D+V++  LI+G+CK  + ++   L+  MV      T  T+N     L 
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 533

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           + +++  A  +  +M + G+     T+T  I+G C+ G    ++++   ++   C  ++ 
Sbjct: 534 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 593

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  +I+GLC +GR++ A  +  S+    + PN  TY ++++     G++D+A  +   M
Sbjct: 594 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 653

Query: 514 EENAAAPDVITFDMLIHGFIRIN 536
            +N   P+   +  L+ GF+  N
Sbjct: 654 VKNGCQPNSHIYSALLSGFVLSN 676



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 252/558 (45%), Gaps = 50/558 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNIL 102
           EAF +F+ M +     P   +++IL+  L +    +            G  P+  TY +L
Sbjct: 224 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 283

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C IG           +      PN  T+  LI  L  E +I EA  +F K+   G 
Sbjct: 284 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 343

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P +IT+N LING C+ G  + A  L   M  GN      CKPN  TY+ +++GLC+   
Sbjct: 344 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN------CKPNIRTYNELMEGLCRVSK 397

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
             KA  L  ++ D  + PD VTYN L+ G C     N A  +F  M   G++P   TF  
Sbjct: 398 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 457

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D LCK  ++++A+ +L  MV++G+  +  T+  L+DG C +GK      LF +M    
Sbjct: 458 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           C     ++N  ++   K+ ++ EA ++  +M+  G+ P+VVT+  L  G     +   +L
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 577

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           K+ + M++ G + +  TYT  I+GLC NG + EA  +  ++       +   Y  L+   
Sbjct: 578 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 637

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG------------LCNDGQMDKARDLF 510
            K+GRL  A+++  ++      PN   Y+ ++ G            L + G +D AR L 
Sbjct: 638 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD-ARSLS 696

Query: 511 LDMEEN-------------------------AAAPDVITFDMLIHGFIRINEPSKVNELL 545
            +  +N                            P    ++ L+ G  +     + ++L 
Sbjct: 697 SEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLT 756

Query: 546 HKMKEKKVMPDASIVSIV 563
             M +  + PD +I SI+
Sbjct: 757 QDMVKHGLFPDKAISSII 774



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 244/493 (49%), Gaps = 17/493 (3%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF---T 155
           Y+ L+ C  K+    + F+ + R++   F      + +++  L  ++  ++AA +F    
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNAL-CKNGFVQAAEMFCCKV 197

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
               FG + +V T   L N  CR      A  +FE+M+         C+PN+VTYS +I 
Sbjct: 198 LRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEEN-----CRPNSVTYSILIH 250

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
           GLC+ G +++A  L  +M ++   P   TY  LI   C     ++A ++  EM  +   P
Sbjct: 251 GLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVP 310

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +V T+ +++D LC+  K++EA+ +   M++ G+ P   T+N L++G+C  G +  A +L 
Sbjct: 311 NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 370

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ME   CK +  +YN L+ G C+  +  +A  L R +V  G+ P  VTYN L  G  + 
Sbjct: 371 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 430

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            Q+  A  +F+ M   G+  D  T+T  IDGLCK G + +A  +  ++      LD   +
Sbjct: 431 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 490

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LIDG CK G+ K    LF ++     +    T+N  +  L  D ++++A  +   M +
Sbjct: 491 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 550

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN----- 570
               P V+T  +LI G  R  E +   ++L +MK+    P+    +I+++ L  N     
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 610

Query: 571 -EISLKSLPSFLV 582
            E  L S+ SF V
Sbjct: 611 AETILFSMSSFGV 623



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 252/549 (45%), Gaps = 49/549 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+  L +    +       ++   GL P + T+N LIN +CK G V   F  
Sbjct: 310 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +    PN  T+N L++GL   S+  +A  L  ++   G  P+ +TYN L++G C+
Sbjct: 370 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 429

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G   +A N+F  M +   E      P+  T++ +IDGLCK G +++A  +   M  + I
Sbjct: 430 EGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + D VT+ +LI G C      +   LF  M++     +  TFN  +D L K+ K++EA+ 
Sbjct: 484 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 543

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  M++ G+ P+  T+  L++G C  G+   + ++   M+  GC  +  +Y I+ING C
Sbjct: 544 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 603

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            N  VEEA ++   M S G+ P   TY  L     +  +++ A ++   M ++G   ++ 
Sbjct: 604 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 663

Query: 419 TYTTFIDGL-------------------------------CKNGYIIEAVELFRTLRIL- 446
            Y+  + G                                C + ++   +++   L+I  
Sbjct: 664 IYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRD 723

Query: 447 ---KCELDIQ-AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
              KC +  +  YN L+ GLCK GR+  A +L   +    L P+    +I I+  C   +
Sbjct: 724 EIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCK 782

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            D   +    + +N   P   ++  +IHG        +  +L+  +     + +   V+ 
Sbjct: 783 YDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTP 842

Query: 563 VVDLLVKNE 571
            ++ L+K E
Sbjct: 843 SIEFLMKEE 851



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 5/200 (2%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G + +   Y+TL + L +++    A  ++  M  +G       Y T ++ LCKNG+
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 433 IIEAVELF--RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVT 489
            ++A E+F  + LR L   LD      L+   C+   L  A+ +F  +       PN VT
Sbjct: 187 -VQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVT 244

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y+I+I GLC  G++++A  L  +M E    P   T+ +LI     I    K  ++L +M 
Sbjct: 245 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 304

Query: 550 EKKVMPDASIVSIVVDLLVK 569
            K  +P+    +I++D L +
Sbjct: 305 TKACVPNVHTYTILIDRLCR 324


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 243/510 (47%), Gaps = 45/510 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N Y+Y ILI   C+   V    + F  + R   +PN   F  LI GL    R+ +A
Sbjct: 248 GCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF  +   G  P+V+TYN +I G  + G    AL + +E+   NG     C P+  TY
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG-----CHPDDWTY 361

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I GLC +   ++A+ L      E   P VVT+ +LI+G C A  +++A R+  +MM 
Sbjct: 362 NTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS 420

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
              +  +  F  +++ L K  ++ EA  LL+ +   G+ PN  TY +++DG+C  GK++ 
Sbjct: 421 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E+   ME  GC+ +  +YN L+ G  K+K++ +A++L  +M   GI P V+TY TL  
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 540

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  + H  ++A +LF+ M+++G+  D   Y    D LCK G   EA        +    L
Sbjct: 541 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGV---AL 597

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN----------- 499
               Y  LIDG  K+G   FA  L   +      P+  TY++++  LC            
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 500 ------------------------DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
                                   +G+ D A+ ++ +M  +   P   T+ + I+ + + 
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                  +L+ KM+ + V PD    +I++D
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILID 747



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 251/544 (46%), Gaps = 46/544 (8%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L + K     ++A GL PN+ TY  +I+ +CK G+V +       + R    PNA T+NS
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ GL  + ++ +A AL TK++  G  PNVITY TL+ G C       A  LFE M    
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562

Query: 197 GE---------IGVVCKP-----------------NTVTYSTIIDGLCKEGFVDKAKALF 230
            +            +CK                    V Y+T+IDG  K G  D A  L 
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M DE   PD  TY+ L+H LC     NEA  +  +M  +G++ ++  + +++DE+ + 
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K D A R+ + M   G +P+A TY   ++ +C  G++  AE+L   ME  G   D V+Y
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL----------------GLFE 394
           NILI+G      ++ A S  + MV    +P   TY  L                  G++ 
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL--RILKCELDI 452
           + +++   +L + M + G+     TY++ I G CK G + EA  L   +  + L    DI
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  LI   C +   + A      +      P + +Y +++ GLCN+G  +K + LF D
Sbjct: 863 --YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCD 920

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           + E     D + + +L  G ++        ++L  M+++     +   ++V + + +   
Sbjct: 921 LLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHEVSS 980

Query: 573 SLKS 576
           SL S
Sbjct: 981 SLVS 984



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 204/417 (48%), Gaps = 7/417 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           ++++L   G  P+ +TYNT+I   C+ G    A   F  +  G  E      P T T + 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLE------PETFTCNA 223

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ G C+ G + KA  LFL M       +  +Y  LI GLC A    EA  LF+ M   G
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG 283

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P+V  F  ++  LCK+ ++ +A  L D M Q GV P+  TYN ++ G+  +G++N A 
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           ++   ME  GC  DD +YN LI G C  K  EEA  L    V +G  PTVVT+  L  G 
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               + + AL++ ++M       D + +   I+ L K   + EA EL   +       ++
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +IDG CKSG++  A E+   +      PN  TYN ++ GL  D ++ KA  L   
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M+++   P+VIT+  L+ G    ++      L   M++  + PD    +++ D L K
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK 579



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 187/381 (49%), Gaps = 34/381 (8%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+  +  L +    +    ++ Q+  + + PD VTYN++I   C   D   A R F  ++
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           + G++P   T N ++   C+  ++ +A  L  +M   G + N  +Y  L+ G C    + 
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  M+  GC  +  ++  LI+G CK+  V +A  L+  M   G+ P+V+TYN + 
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK-------------------- 429
           +G  ++ ++  ALK+ + M+++G   D  TY T I GLC                     
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 390

Query: 430 ---------NGYII-----EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
                    NGY +     +A+ +   +   KC+LD+Q +  LI+ L K  RLK A EL 
Sbjct: 391 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 450

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    LVPNV+TY  +I G C  G++D A ++   ME +   P+  T++ L++G ++ 
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKD 510

Query: 536 NEPSKVNELLHKMKEKKVMPD 556
            +  K   LL KM++  ++P+
Sbjct: 511 KKLHKAMALLTKMQKDGIIPN 531



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 4/193 (2%)

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A+   R   S  +  +   YN     L      E+  +++ ++ +DG+  DT TY T I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--LIDGLCKSGRLKFAWELFCSLPHGV 482
              CK G +  A   FR L  L+  L+ + + C  L+ G C++G L+ A  LF  +P   
Sbjct: 191 KSYCKEGDLTTAHRCFRLL--LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
              N  +Y I+IQGLC    + +A  LFL M+ +  +P+V  F  LI G  +        
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 543 ELLHKMKEKKVMP 555
            L   M +  V+P
Sbjct: 309 LLFDAMPQNGVVP 321


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 227/445 (51%), Gaps = 8/445 (1%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G  P++  YN+LI+ +C+ G +  G +  G +    F P   T+ SLI  L  +  + 
Sbjct: 232 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLE 291

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
           +  +LF +++  G  PNV  YN++I+ LC+      A+ + ++M A+G       C P+ 
Sbjct: 292 KIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG-------CDPDI 344

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           +T++T+I GLC EG V KA+    +     +NP+ ++Y  LIHG C   +   A  L +E
Sbjct: 345 ITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLME 404

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           MM +G  P VVTF  ++  L    K+ EA  + + M +R V P+   YN L+ G C    
Sbjct: 405 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHM 464

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A+ +   M     + D+  Y  LI+G+ +++ + +A  ++  M  KG++P +V+ N 
Sbjct: 465 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNA 524

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G  +   +  A+     M++ G   D  TYTT I G  K G +  A+     +   K
Sbjct: 525 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 584

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ ++  Y+ LI+G CK+G    A  LF ++    L PNVVTY I+I  L    ++ +A 
Sbjct: 585 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 644

Query: 508 DLFLDMEENAAAPDVITFDMLIHGF 532
             F  M  N  +P+ +T   L++G 
Sbjct: 645 LYFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 215/440 (48%), Gaps = 6/440 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L++GL  E R+ E   L       GC P+V+ YN LI+G CR G     L L  EM    
Sbjct: 210 LVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM-EAK 268

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           G +     P  VTY ++I+ L K+G ++K  +LFL+M+   ++P+V  YNS+I  LC   
Sbjct: 269 GFL-----PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCW 323

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A  +  +M   G  P ++TFN ++  LC    + +A   L   ++R + PN  +Y 
Sbjct: 324 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 383

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L+ GFC+ G++  A +L   M   G   D V++  LI+G     +V EAL +  +M  +
Sbjct: 384 PLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 443

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            + P V  YN L  GL + H +  A  + +EM    V  D   Y T IDG  ++  + +A
Sbjct: 444 QVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 503

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            ++F  +       DI + N +I G C+ G +  A     ++     +P+  TY  +I G
Sbjct: 504 RKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 563

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               G ++ A     DM +    P+V+T+  LI+G+ +  +      L   M+ + + P+
Sbjct: 564 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 623

Query: 557 ASIVSIVVDLLVKNEISLKS 576
               +I++  L K +  L++
Sbjct: 624 VVTYTILIGSLFKKDKVLRA 643



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 223/501 (44%), Gaps = 56/501 (11%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A G  P L TY  LINC  K G +      F  + +   +PN   +NS+I  L     
Sbjct: 265 MEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWS 324

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  +  ++ A GC+P++IT+NTLI GLC  GH   A +   E       I     PN
Sbjct: 325 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE------AIRRELNPN 378

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA----- 261
            ++Y+ +I G C  G +  A  L ++M      PDVVT+ +LIHGL  A   +EA     
Sbjct: 379 QLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE 438

Query: 262 ------------------------------KRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
                                         K +  EM+++ VQP    +  ++D   ++ 
Sbjct: 439 KMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 498

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            + +A ++ + M  +GVRP+  + N ++ G+C  G ++ A     +M  +GC  D+ +Y 
Sbjct: 499 NLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYT 558

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I+GY K   +  AL    +M+ +  KP VVTY++L  G  +    + A  LF  MQ +
Sbjct: 559 TVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAE 618

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL--------- 462
            ++ +  TYT  I  L K   ++ A   F T+ +  C  +    + L++GL         
Sbjct: 619 ALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVIN 678

Query: 463 ---CKSGRLKFAWEL---FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
              C +  +     L   F  L   +  P    YN +I  LC    + +A D    M + 
Sbjct: 679 SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKK 738

Query: 517 AAAPDVITFDMLIHGFIRINE 537
              P+ ITF  L++GF  + +
Sbjct: 739 GYVPNPITFLSLLYGFCSVGK 759



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 204/439 (46%), Gaps = 10/439 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT--LINGLCRTGHTMIAL 186
           P     N L+K L  + R  +A  L+ ++   G +     Y+T  L+ GLC  G     L
Sbjct: 167 PEVTHCNRLLKLLVEQRRWDDARKLYDEM--LGEDSGADNYSTCVLVRGLCLEGRVEEGL 224

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L E         G  C P+ V Y+ +IDG C+ G + +   L  +M+ +   P +VTY 
Sbjct: 225 KLIE------ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYG 278

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           SLI+ L    D  +   LF+EM  +G+ P+V  +N ++D LCK     +A  +L  M   
Sbjct: 279 SLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFAS 338

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G  P+  T+NTL+ G C  G + +AE             + +SY  LI+G+C   E+  A
Sbjct: 339 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAA 398

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L  EM+ +G  P VVT+  L  GL    +V  AL + ++M    V  D   Y   I G
Sbjct: 399 SDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 458

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK   +  A  +   +     + D   Y  LIDG  +S  L  A ++F  + H  + P+
Sbjct: 459 LCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPD 518

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           +V+ N MI+G C  G M +A     +M +    PD  T+  +I G+ +    +     L 
Sbjct: 519 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 578

Query: 547 KMKEKKVMPDASIVSIVVD 565
            M ++K  P+    S +++
Sbjct: 579 DMIKRKCKPNVVTYSSLIN 597



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 180/371 (48%), Gaps = 5/371 (1%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  + +ST++  L +    D        M      P      +L+     A    +A  +
Sbjct: 96  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM 155

Query: 265 FIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT--LMDG 321
              + +Q G  P V   N ++  L + R+ D+A +L D M+  G    A  Y+T  L+ G
Sbjct: 156 CERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEML--GEDSGADNYSTCVLVRG 213

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            CL G++    +L  +    GC    V YN+LI+GYC+  ++   L L  EM +KG  PT
Sbjct: 214 LCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPT 273

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           +VTY +L   L +   +E    LF EM++ G++ + + Y + ID LCK     +A+ + +
Sbjct: 274 LVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILK 333

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +    C+ DI  +N LI GLC  G ++ A           L PN ++Y  +I G C  G
Sbjct: 334 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 393

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++  A DL ++M      PDV+TF  LIHG +   + S+   +  KM E++V PD +I +
Sbjct: 394 ELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 453

Query: 562 IVVDLLVKNEI 572
           +++  L K  +
Sbjct: 454 VLISGLCKKHM 464



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 1/368 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN-PDVVTYNSLIHGLCHANDWNEAKR 263
           P       ++      G + KA  +  +++++  + P+V   N L+  L     W++A++
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 190

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L+ EM+ +       +  V++  LC   +++E  +L++     G  P+   YN L+DG+C
Sbjct: 191 LYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 250

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G + R   L G ME+ G     V+Y  LIN   K  ++E+  SL+ EM  +G+ P V 
Sbjct: 251 RRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQ 310

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            YN++   L +      A+ +  +M   G   D  T+ T I GLC  G++ +A    R  
Sbjct: 311 IYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 370

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
              +   +  +Y  LI G C  G L  A +L   +      P+VVT+  +I GL   G++
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKV 430

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A  +   M E    PDV  +++LI G  + +       +L +M EK V PD  + + +
Sbjct: 431 SEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATL 490

Query: 564 VDLLVKNE 571
           +D  +++E
Sbjct: 491 IDGFIRSE 498


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 210/408 (51%), Gaps = 9/408 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ ++ N+L+ GL    R+  A   F         P++ T+NT+I+GLCR G    A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK---AKALFLQMKDENINPDVVTY 245
            +++            P+  TY+++IDG CK+G          L  +M +  I+P  VT+
Sbjct: 214 AKDIKAWG------LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             LI+G C  ++   A R+F EM  QG+  SVVT+N ++  LC   K++E  +L++ M  
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ PN  T+  ++ GFC  G +  A +    M     + D V YNILI+ Y +  ++E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+++   M  KGI P V TYN L  G         A  L DEM+  G+ AD  TY   I 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LC  G + +AV+L   +  +  E +   YN +I G C  G +K A+E+   +       
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           NVVTYN+ I+  C  G+MD+A DL  +M +    P+ IT++ +  G +
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/448 (32%), Positives = 222/448 (49%), Gaps = 18/448 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +L +  +  P+ +++  L  LA   H   R       P+  + N L+       RV L  
Sbjct: 126 VLALARASQPLRAYDAFL--LAGESHPRHR-------PSTSSVNALLAGLVGAKRVDLAE 176

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
            AF   LR   +P+  TFN++I GL    ++ +A  +   +KA+G  P+V TYN+LI+G 
Sbjct: 177 KAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGY 236

Query: 177 CRTGHT--MIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           C+ G    M  ++ L +EM     E G+   P  VT+  +I+G CK      A  +F +M
Sbjct: 237 CKKGGAGNMYHVDMLLKEMV----EAGI--SPTAVTFGVLINGYCKNSNTAAAVRVFEEM 290

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           K + I   VVTYNSLI GLC      E  +L  EM D G+ P+ +TF  ++   CK   M
Sbjct: 291 KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMM 350

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A+  +D M +R V P+   YN L+D +  +GK+  A  +  +M   G   +  +YN L
Sbjct: 351 ADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCL 410

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I G+ ++ +   A  L  EM  KGI+  VVTYN L   L    +V  A+KL DEM   G+
Sbjct: 411 ITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  TY T I G C  G I  A E+   +   +   ++  YN  I   C+ G++  A +
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           L   +    LVPN +TY  + +G+   G
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 201/398 (50%), Gaps = 9/398 (2%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  + N L+ GL       +A   F               P+  T++T+I GLC+ G 
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRR------VSPDIYTFNTVISGLCRIGQ 206

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCH---ANDWNEAKRLFIEMMDQGVQPSVVT 279
           + KA  +   +K   + P V TYNSLI G C    A +      L  EM++ G+ P+ VT
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F V+++  CKN     A R+ + M Q+G+  +  TYN+L+ G C  GK+    +L   ME
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            +G   +++++  ++ G+CK   + +A      M  + ++P VV YN L      + ++E
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+ + + M + G++ +  TY   I G  ++G    A  L   ++    E D+  YN LI
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
             LC  G ++ A +L   +    L PN +TYN +IQG C+ G +  A ++   ME+    
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKR 506

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +V+T+++ I  F +I +  + N+LL++M +K ++P+ 
Sbjct: 507 ANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 188/385 (48%), Gaps = 51/385 (13%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAK----NKHYDTR--LNATGLFPNLYTYNILINCFC 107
           F   LR   SP  + +FN +++ L +     K  D    + A GL P++ TYN LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 108 KIGRVSLGF---IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           K G     +   +    ++ +  +P A TF  LI G    S    A  +F ++K  G   
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V+TYN+LI+GLC  G     + L EEM     ++G+   PN +T+  ++ G CK+G + 
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMA 351

Query: 225 KAKALFLQMKDENINPDVV-----------------------------------TYNSLI 249
            A      M + N+ PDVV                                   TYN LI
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G   + DW  A  L  EM ++G++  VVT+NV++  LC   ++ +A +LLD M + G+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TYNT++ GFC  G I  A E+   ME    + + V+YN+ I  +C+  +++EA  L
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDL 531

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFE 394
             EM+ K + P  +TY T+  G+ E
Sbjct: 532 LNEMLDKCLVPNGITYETIKEGMME 556



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 153/297 (51%), Gaps = 3/297 (1%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +PS  + N ++  L   +++D A +     ++R V P+  T+NT++ G C +G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS---LYREMVSKGIKPTVVTYNTLFL 390
           +   +++ G      +YN LI+GYCK            L +EMV  GI PT VT+  L  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +      A+++F+EM++ G+AA   TY + I GLC  G + E V+L   +  L    
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   + C++ G CK G +  A +    +    + P+VV YNI+I      G+M+ A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             M +   +P+V T++ LI GF R  +    + LL +MKEK +  D    ++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V+++N L+   +++  + +       +   G+  ++ TYN+LI   C  G V      
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      PN  T+N++I+G   +  I  A  + T+++      NV+TYN  I   C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            G    A +L  EM      +     PN +TY TI +G+ ++G+    +   +    EN
Sbjct: 522 IGKMDEANDLLNEM------LDKCLVPNGITYETIKEGMMEKGYTPDIRGCTVSQASEN 574



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 3/135 (2%)

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N L+ GL  + R+  A + F S     + P++ T+N +I GLC  GQ+ KA D+  D++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 516 NAAAPDVITFDMLIHGFIRINEPSK---VNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
              AP V T++ LI G+ +         V+ LL +M E  + P A    ++++   KN  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 573 SLKSLPSFLVQERQG 587
           +  ++  F   ++QG
Sbjct: 280 TAAAVRVFEEMKQQG 294


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 242/510 (47%), Gaps = 45/510 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N Y+Y ILI   C    V    + F  + R   +PN   F  LI GL    R+ +A
Sbjct: 248 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF  +   G  P+V+TYN +I G  + G    AL + +E+   NG     C P+  TY
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG-----CHPDDWTY 361

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I GLC +   ++A+ L      E   P VVT+ +LI+G C A  +++A R+  +MM 
Sbjct: 362 NTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS 420

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
              +  +  F  +++ L K  ++ EA  LL+ +   G+ PN  TY +++DG+C  GK++ 
Sbjct: 421 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E+   ME  GC+ +  +YN L+ G  K+K++ +A++L  +M   GI P V+TY TL  
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 540

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  + H  ++A +LF+ M+++G+  D   Y    D LCK G   EA        +    L
Sbjct: 541 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGV---AL 597

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN----------- 499
               Y  LIDG  K+G   FA  L   +      P+  TY++++  LC            
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 500 ------------------------DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
                                   +G+ D A+ ++ +M  +   P   T+ + I+ + + 
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                  +L+ KM+ + V PD    +I++D
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILID 747



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 251/544 (46%), Gaps = 46/544 (8%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L + K     ++A GL PN+ TY  +I+ +CK G+V +       + R    PNA T+NS
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ GL  + ++ +A AL TK++  G  PNVITY TL+ G C       A  LFE M    
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562

Query: 197 GE---------IGVVCKP-----------------NTVTYSTIIDGLCKEGFVDKAKALF 230
            +            +CK                    V Y+T+IDG  K G  D A  L 
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M DE   PD  TY+ L+H LC     NEA  +  +M  +G++ ++  + +++DE+ + 
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K D A R+ + M   G +P+A TY   ++ +C  G++  AE+L   ME  G   D V+Y
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL----------------GLFE 394
           NILI+G      ++ A S  + MV    +P   TY  L                  G++ 
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL--RILKCELDI 452
           + +++   +L + M + G+     TY++ I G CK G + EA  L   +  + L    DI
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  LI   C +   + A      +      P + +Y +++ GLCN+G  +K + LF D
Sbjct: 863 --YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCD 920

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           + E     D + + +L  G ++        ++L  M+++     +   ++V + + +   
Sbjct: 921 LLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHEVSS 980

Query: 573 SLKS 576
           SL S
Sbjct: 981 SLVS 984



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 242/543 (44%), Gaps = 21/543 (3%)

Query: 30  VHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA 89
            H  DL     D     P  A   F+++ R         S   LL       H  +R  A
Sbjct: 55  AHVADLF--RADSTAPEPATALAFFEWLARRDGFRHTADSHAALL-------HLLSRRRA 105

Query: 90  TGLFPNLYTYNILINC--FCKIGRVSLGFI-AFGRILRSCFTPNAATFNSLIKGLHAESR 146
              +  L     ++NC    +  RVS   I A  R   +    +   +N  ++ L     
Sbjct: 106 PAQYERLVVS--MLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDM 163

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
                 ++++L   G  P+ +TYNT+I   C+ G    A   F  +  G  E      P 
Sbjct: 164 TEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE------PE 217

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           T T + ++ G C+ G + KA  LFL M       +  +Y  LI GLC A    +A  LF+
Sbjct: 218 TFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFL 277

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G  P+V  F  ++  LCK+ ++ +A  L D M Q GV P+  TYN ++ G+  +G
Sbjct: 278 MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLG 337

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           ++N A ++   ME  GC  DD +YN LI G C  K  EEA  L    V +G  PTVVT+ 
Sbjct: 338 RMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFT 396

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G     + + AL++ ++M       D + +   I+ L K   + EA EL   +   
Sbjct: 397 NLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 456

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               ++  Y  +IDG CKSG++  A E+   +      PN  TYN ++ GL  D ++ KA
Sbjct: 457 GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKA 516

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L   M+++   P+VIT+  L+ G    ++      L   M++  + PD    +++ D 
Sbjct: 517 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 576

Query: 567 LVK 569
           L K
Sbjct: 577 LCK 579


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 199/349 (57%)

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTY+T+I   C+EG +++A  +   M D+ + P + TYN++I+GLC    +  AK + IE
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++ G+ P   T+N ++ E C+     EA  +   M+++GV P+  ++++LM  F     
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +++A   F  M+  G   D+V Y +L++GYC+N  + EAL +  EM+ +G    V+ YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  GL +   +  A KLFDEM   G   D  T+TT I G C++G + +A+ LF T+    
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            + DI AYN LIDG CK G ++ A EL+  +    + PN +TY I+I   C+ G + +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            L+  M E    P ++T + +I G+ R  + SK +E L +M  K V PD
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 350



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 166 VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
           ++TYNTLI   CR G    A  +   MA+         KP+  TY+ II+GLCK+G   +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKG------LKPSLFTYNAIINGLCKKGRYAR 54

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           AK + ++M +  ++PD  TYN+L+   C  ++++EAK +F EM+ QGV P +V+F+ +M 
Sbjct: 55  AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMA 114

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
              +NR +D+A      M + G+ P+   Y  LM G+C  G +  A ++   M   GC  
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D ++YN ++NG CK K + +A  L+ EMV +G  P   T+ TL  G  +   +  AL LF
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
             M +  +  D   Y T IDG CK G + +A EL+  +   K   +   Y  LI+  C  
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G +  A+ L+  +    + P +VT N +I+G C  G   KA +    M     APD I++
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 354

Query: 526 DMLIH 530
           + LI+
Sbjct: 355 NTLIN 359



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 189/371 (50%), Gaps = 7/371 (1%)

Query: 96  LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
           + TYN LI  +C+ G +   F     +      P+  T+N++I GL  + R   A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           ++   G  P+  TYNTL+   CR  +   A  +F EM       GVV  P+ V++S+++ 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ----GVV--PDLVSFSSLMA 114

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
              +   +D+A   F  MK   + PD V Y  L+HG C   +  EA ++  EM++QG   
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            V+ +N I++ LCK + + +A +L D MV+RG  P+  T+ TL+ G C  G + +A  LF
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
           G+M     K D V+YN LI+G+CK  E+E+A  L+  M+S+ I P  +TY  L      +
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
             V  A +L+D M   G+     T  T I G C++G   +A E    +       D  +Y
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 354

Query: 456 NCLI-DGLCKS 465
           N LI DG  +S
Sbjct: 355 NTLINDGKRRS 365



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 179/335 (53%), Gaps = 6/335 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P+L+TYN +IN  CK GR +        +L    +P+  T+N+L+          EA
Sbjct: 31  GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 90

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F ++   G  P+++++++L+    R  H   AL  F +M     + G+V  P+ V Y
Sbjct: 91  KEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMK----KFGLV--PDNVIY 144

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++ G C+ G + +A  +  +M ++    DV+ YN++++GLC      +A +LF EM++
Sbjct: 145 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 204

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P   TF  ++   C++  M +A  L   M QR ++P+   YNTL+DGFC +G++ +
Sbjct: 205 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 264

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A EL+  M S     + ++Y ILIN YC    V EA  L+  M+ KGIKPT+VT NT+  
Sbjct: 265 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 324

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           G         A +    M   GVA D  +Y T I+
Sbjct: 325 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 13/346 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           EAF I + M       P + ++N ++  L K   Y         +   GL P+  TYN L
Sbjct: 19  EAFEIMNSMAD-KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 77

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +   C+    S     FG +LR    P+  +F+SL+        + +A   F  +K FG 
Sbjct: 78  LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGL 137

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ + Y  L++G CR G+ + AL + +EM     E G  C  + + Y+TI++GLCKE  
Sbjct: 138 VPDNVIYTVLMHGYCRNGNMLEALKIRDEML----EQG--CVLDVIAYNTILNGLCKEKM 191

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +  A  LF +M +    PD  T+ +LIHG C   +  +A  LF  M  + ++P +V +N 
Sbjct: 192 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 251

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D  CK  +M++AS L D M+ R + PN  TY  L++ +C +G ++ A  L+  M   G
Sbjct: 252 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 311

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            K   V+ N +I GYC++ +  +A      M++KG+ P  ++YNTL
Sbjct: 312 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 162/314 (51%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           +VTYN+LI   C      EA  +   M D+G++PS+ T+N I++ LCK  +   A  +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M+  G+ P+  TYNTL+   C     + A+E+FG M   G   D VS++ L+  + +N+
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +++AL  +R+M   G+ P  V Y  L  G      +  ALK+ DEM   G   D   Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T ++GLCK   + +A +LF  +       D   +  LI G C+ G +  A  LF ++   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            + P++V YN +I G C  G+M+KA +L+  M      P+ IT+ +LI+ +  +   S+ 
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 542 NELLHKMKEKKVMP 555
             L   M EK + P
Sbjct: 301 FRLWDVMIEKGIKP 314



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 160/289 (55%)

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           +VT+N ++   C+   ++EA  +++ M  +G++P+  TYN +++G C  G+  RA+ +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M ++G   D  +YN L+   C+     EA  ++ EM+ +G+ P +V++++L        
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            ++ AL  F +M++ G+  D   YT  + G C+NG ++EA+++   +    C LD+ AYN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +++GLCK   L  A +LF  +     +P+  T+  +I G C DG M KA  LF  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
              PD++ ++ LI GF ++ E  K +EL   M  +K+ P+     I+++
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 289



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 36/274 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNI 101
           +EA  IF  MLR    P  VS F+ L+A  ++N+H D  L         GL P+   Y +
Sbjct: 88  SEAKEIFGEMLRQGVVPDLVS-FSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 146

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ +C+ G +         +L      +   +N+++ GL  E  + +A  LF ++   G
Sbjct: 147 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 206

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV---------CK-------- 204
             P+  T+ TLI+G C+ G+   AL+LF  M   N +  +V         CK        
Sbjct: 207 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 266

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN +TY  +I+  C  G V +A  L+  M ++ I P +VT N++I G 
Sbjct: 267 ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGY 326

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           C + D ++A      M+ +GV P  +++N ++++
Sbjct: 327 CRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 77/159 (48%)

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I   C+ G + EA E+  ++     +  +  YN +I+GLCK GR   A  +   +
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            +  L P+  TYN ++   C      +A+++F +M      PD+++F  L+  F R    
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            +       MK+  ++PD  I ++++    +N   L++L
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 161



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 90/191 (47%)

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           +VTYNTL         +E A ++ + M   G+     TY   I+GLCK G    A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +  +    D   YN L+   C+      A E+F  +    +VP++V+++ ++     + 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            +D+A   F DM++    PD + + +L+HG+ R     +  ++  +M E+  + D    +
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 562 IVVDLLVKNEI 572
            +++ L K ++
Sbjct: 181 TILNGLCKEKM 191



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 71/136 (52%)

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN LI   C+ G L+ A+E+  S+    L P++ TYN +I GLC  G+  +A+ + ++M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
                +PD  T++ L+    R +  S+  E+  +M  + V+PD    S ++ +  +N   
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 574 LKSLPSFLVQERQGEV 589
            ++L  F   ++ G V
Sbjct: 123 DQALVYFRDMKKFGLV 138


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 235/503 (46%), Gaps = 55/503 (10%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            GLFPN   YN LI+C CK G ++       R+ + C  PN  ++N +I G      I +
Sbjct: 4   AGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC-APNVVSYNIIIDGYCKARNIEK 62

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTV 208
           A A   +++  G  P    Y++++   C+TG+   A+++F EM A G       C+P+ V
Sbjct: 63  ALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKG-------CEPDIV 115

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            ++ ++ GL +   + +A+ LF  M      PDVVTYN++I GLC     +EA  L   M
Sbjct: 116 NFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM 175

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT---YNTLMDGFCLM 325
             + V P+ VT+  ++D LCK  ++ +A  + + M +    P ACT   Y+ L +     
Sbjct: 176 KQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEG---PCACTEPAYSVLFNKLQRA 232

Query: 326 GKINRAEELFGSM----------------------------------ESMGCK--HDDVS 349
           GK+  A  ++  M                                  E MG K   D  +
Sbjct: 233 GKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYA 292

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y+ILING CK +   EA  +++EM  +GI PTVVTYNTL  GL    +++ A++L   M 
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   DT +Y   I G C NG   EA  LF+ +      L+   YN +I G  K     
Sbjct: 353 DQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWS 412

Query: 470 FAWELFCSLPHG----VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            AW LF  +  G    V  PN+ TY I+I  LC   Q+++A  L   M +    P +  +
Sbjct: 413 SAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIW 472

Query: 526 DMLIHGFIRINEPSKVNELLHKM 548
           ++L+    R        EL  +M
Sbjct: 473 EVLLSRLARAGRLDDAFELYKEM 495



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 238/457 (52%), Gaps = 16/457 (3%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +L +   PNA  +N+LI  L     + EA +   ++    C PNV++YN +I+G C+  +
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL    EM     E+G    P    YS+I+   CK G V KA  +F +M  +   PD
Sbjct: 60  IEKALAFLREME----ELGH--PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPD 113

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           +V +N L+ GL  A   +EA+ LF  M  +G +P VVT+N ++  LCK +K+DEA  LL+
Sbjct: 114 IVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE 173

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M Q  V P   TY TL+D  C   ++ +A E+F  M    C   + +Y++L N   +  
Sbjct: 174 RMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAG 233

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH--QVEHALKLFDEMQRDGVAADTRT 419
           ++ EA  +Y +M  K +  T  TY+ + LGL ++    VE A KL  EM    +A D   
Sbjct: 234 KLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIAPDFYA 292

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL-FCSL 478
           Y+  I+GLCK     EA E+F+ +R       +  YN L++GL  + +L+ A EL +  L
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
             G L P+  +YN+MI+G C +G  ++A  LF DM ++    +  T++ +I GFI+    
Sbjct: 353 DQGRL-PDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAW 411

Query: 539 SKVNELLHKMK----EKKVMPDASIVSIVVDLLVKNE 571
           S    L  +M+    +K   P+     I++  L K +
Sbjct: 412 SSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTD 448



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 249/548 (45%), Gaps = 53/548 (9%)

Query: 56  YMLRM-HPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCK 108
           Y+ RM     P V S+NI++    K ++ +  L         G  P  + Y+ ++  FCK
Sbjct: 32  YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 91

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            G VS     F  +      P+   FN L+ GL    +I EA  LF  + + GC+P+V+T
Sbjct: 92  TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 151

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YNT+I GLC+      A+ L E M   +        P  VTY+T+ID LCK   + +A  
Sbjct: 152 YNTMIAGLCKWKKLDEAVFLLERMKQED------VSPTFVTYTTLIDHLCKFTRLQQAYE 205

Query: 229 LFLQMKD-----------------------------------ENINPDVVTYNSLIHGLC 253
           +F +M +                                   +N+     TY+ ++ GL 
Sbjct: 206 VFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLS 265

Query: 254 HANDWN-EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             +  N EA +L  EMM + + P    ++++++ LCK R+  EA  +   M  RG+ P  
Sbjct: 266 KMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTV 325

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYNTL++G     K+  A EL   M   G   D  SYN++I G+C N +  EA  L+++
Sbjct: 326 VTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQD 385

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR---DGVAA-DTRTYTTFIDGLC 428
           M+  GI     TYN + +G  +      A  LF  MQ    D V A +  TY   I  LC
Sbjct: 386 MIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLC 445

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K   + EA +L   +R       ++ +  L+  L ++GRL  A+EL+  +        V 
Sbjct: 446 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 505

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           + NI++ G+   G +D+A+D    M +    PD  T+D L+ G     +  +  +L+ ++
Sbjct: 506 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565

Query: 549 KEKKVMPD 556
                 P+
Sbjct: 566 VRDGKRPE 573



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 232/541 (42%), Gaps = 93/541 (17%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +FN+LL+ L +  K ++ R     +N+ G  P++ TYN +I   CK  ++      
Sbjct: 112 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 171

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+ +   +P   T+ +LI  L   +R+ +A  +F K+    C      Y+ L N L R
Sbjct: 172 LERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQR 231

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK-EGFVDKAKALFLQMKDEN 237
            G  + A  ++ +M   N     VC  +  TYS ++ GL K +G   +A  L  +M  + 
Sbjct: 232 AGKLVEASRVYSDMCRKN-----VCMTDN-TYSLVVLGLSKMDGGNVEAAKLVTEMMGKK 285

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I PD   Y+ LI+GLC A    EAK +F EM  +G+ P+VVT+N +++ L    K+ +A 
Sbjct: 286 IAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAM 345

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC-------------- 343
            L   M+ +G  P+ C+YN ++ GFC  G  N A  LF  M   G               
Sbjct: 346 ELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGF 405

Query: 344 -------------------KHDDV------SYNILINGYCKNKEVEEALSLYREMVSKGI 378
                              K+D V      +Y ILI+  CK  +VEEA  L   M  KG 
Sbjct: 406 IKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF 465

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR---------------------------- 410
            P++  +  L   L    +++ A +L+ EM R                            
Sbjct: 466 VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 525

Query: 411 -------DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
                   G+  D  TY   + GLC  G   +A +L   L       + Q    L+  LC
Sbjct: 526 FLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALC 585

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDV 522
             G  + A+E +C LP   +   +  +N ++   C   ++D     +LDM E+    PDV
Sbjct: 586 AQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKLD-----YLDMIEQREGVPDV 640

Query: 523 I 523
           I
Sbjct: 641 I 641



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 40/286 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFC 107
           NEA+C+F  M++                               G+  N +TYN +I  F 
Sbjct: 377 NEAYCLFQDMIK------------------------------DGIVLNTWTYNFMIVGFI 406

Query: 108 KIGRVSLGFIAFGRILR----SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           K    S  ++ F R+          PN  T+  LI  L    ++ EA  L + ++  G  
Sbjct: 407 KDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFV 466

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P++  +  L++ L R G    A  L++EM+  N      C+    + + ++DG+ + G V
Sbjct: 467 PSLKIWEVLLSRLARAGRLDDAFELYKEMSRIN------CQQLVGSSNILLDGILRRGSV 520

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D+AK    QM D  I PD  TY+ L+ GLC     ++A++L  E++  G +P       +
Sbjct: 521 DEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQL 580

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +  LC       A      +   GV      +NTL+   CL  K++
Sbjct: 581 LGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKLD 626



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L PN + YN +I  LC  G + +A      M ++ A P+V++++++I G+ +     K  
Sbjct: 6   LFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKAL 64

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             L +M+E    P     S +V    K     K++  F     +G
Sbjct: 65  AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKG 109


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 247/471 (52%), Gaps = 26/471 (5%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ATG   N+ TY  LI+ +C+ GR+  +L  IA   +      P+  T+N+++KGL    +
Sbjct: 152 ATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMPV-----APDTYTYNTVLKGLCIAKK 205

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA  L  ++    C PN +T+ T I   C+ G    A+ L ++M          C P+
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYG------CTPD 259

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V YST+I+G  ++G VD+A  L   M      P+ V YN+ + GLC A  W +   L  
Sbjct: 260 VVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMA 316

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +G  P+  TF++++  LC+N  +D A  +L+ M + G  P+   YN +++     G
Sbjct: 317 EMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG 376

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A  L   + SM CK D + +N ++ G+C+ +   +A  L  +M         +T+N
Sbjct: 377 RVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFN 433

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L   L +   V +A ++F++M R     D  TY++ ++G  + G +  A++LFR++   
Sbjct: 434 ILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM--- 490

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C+ DI +YN ++ GLC++ R + A EL   +      PN VT+NI+I  LC  G +D+A
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            ++   M    + PD+ T++ LI+GF   +E  ++++ L  +      PDA
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGF---SEQGRLDDALKLLSTMSCKPDA 598



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 215/472 (45%), Gaps = 53/472 (11%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ YTYN ++   C   +          ++R+   PN  TF + I+       +  A  L
Sbjct: 188 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 247

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++  +GC P+V+ Y+TLING    GH   AL+L   M         +CKPNTV Y+  
Sbjct: 248 LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---------LCKPNTVCYNAA 298

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC     +    L  +M  +  +P+  T++ LI  LC  N  + A  +  +M   G 
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM-------- 325
           +P  V +N+I++ L +  ++D+A RLL+ MV    +P+A  +N ++ GFC          
Sbjct: 359 EPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASE 415

Query: 326 ---------------------------GKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
                                      G +N A ++F  M    C  D V+Y+ L+NG+ 
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 475

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   VE A+ L+R M     KP + +YN +  GL    + E A +L  EM       +  
Sbjct: 476 EQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 532

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+   I+ LC+ G +  A+E+   +       DI  YN LI+G  + GRL  A +L  ++
Sbjct: 533 TFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM 592

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
                 P+ ++YN  ++GLC   +   A +L  +M  N   P+ +TF    H
Sbjct: 593 S---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANH 641



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 224/467 (47%), Gaps = 49/467 (10%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N LIK L A  R+ +A  +   LKA     + +++NTL+ G CR G    A  +      
Sbjct: 94  NILIKKLCATGRLADAERVLDALKAAA-AADAVSHNTLVAGYCRDGRLADAERVL----- 147

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
             G        N VTY+ +IDG C+ G +D A  L   M    + PD  TYN+++ GLC 
Sbjct: 148 --GAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCI 202

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           A  W EA+ L  EM+     P+ VTF   +   C+N  +D A +LLD M + G  P+   
Sbjct: 203 AKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVI 262

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y+TL++GF   G +++A +L   + +M CK + V YN  + G C  +  E+   L  EMV
Sbjct: 263 YSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMV 319

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            KG  P   T++ L   L + + V+ A+++ ++M++ G   DT  Y   I+ L + G + 
Sbjct: 320 RKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVD 379

Query: 435 EAVELFRTL----------RILK----------------------CELDIQAYNCLIDGL 462
           +A+ L  ++           +LK                      C L    +N LID L
Sbjct: 380 DALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTL 439

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C++G + +A ++F  +P     P++VTY+ ++ G    G ++ A  LF  M      PD+
Sbjct: 440 CQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDI 496

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +++ ++ G  R        EL+ +M  K   P+    +I+++ L +
Sbjct: 497 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQ 543



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 175/328 (53%), Gaps = 23/328 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  ++F++L++SL +N   D+      ++   G  P+   YNI+IN   + GRV      
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL-- 382

Query: 119 FGRILRSCF-TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             R+L S    P+A  FN+++KG     R  +A+ L  ++    C    +T+N LI+ LC
Sbjct: 383 --RLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLC 440

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A  +FE+M          C P+ VTYS++++G  ++G V+ A  LF  M    
Sbjct: 441 QNGLVNYATQVFEQMPR------YRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP--- 491

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+ +YN+++ GLC A  W +A  L  EM+ +   P+ VTFN++++ LC+   +D A 
Sbjct: 492 CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAI 551

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +L+ M   G  P+  TYN L++GF   G+++ A +L   + +M CK D +SYN  + G 
Sbjct: 552 EVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKGL 608

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTY 385
           C+ +  ++A  L  EM+     P  VT+
Sbjct: 609 CRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 151/290 (52%), Gaps = 8/290 (2%)

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           ++ N+++ +LC   ++ +A R+LD +       +A ++NTL+ G+C  G++  AE + G+
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
             + G   + V+Y  LI+GYC++  +++AL L   + S  + P   TYNT+  GL    +
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKK 205

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E A +L  EM R+    +  T+ T I   C+NG +  AV+L   +    C  D+  Y+ 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+G  + G +  A +L  ++   +  PN V YN  ++GLC   + +   +L  +M    
Sbjct: 266 LINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +P+  TF MLI    + N      E+L +M++    PD    +I+++ L
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSL 372



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 24/232 (10%)

Query: 69  SFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLGFIAF 119
           +FNIL+ +L +N   +    AT +F         P++ TY+ L+N F + G V +    F
Sbjct: 431 TFNILIDTLCQNGLVNY---ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF 487

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
             +   C  P+  ++N+++KGL   +R  +A  L  ++    C PN +T+N LIN LC+ 
Sbjct: 488 RSM--PC-KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQK 544

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A+ + E+M N          P+  TY+ +I+G  ++G +D A  L   M   +  
Sbjct: 545 GLVDRAIEVLEQMPNYGS------TPDIFTYNALINGFSEQGRLDDALKLLSTM---SCK 595

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           PD ++YNS + GLC A  W +A+ L  EM+     P+ VTF      L  NR
Sbjct: 596 PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNR 647


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 210/408 (51%), Gaps = 9/408 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ ++ N+L+ GL    R+  A   F         P++ T+NT+I+GLCR G    A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK---AKALFLQMKDENINPDVVTY 245
            +++            P+  TY+++IDG CK+G          L  +M +  I+P  VT+
Sbjct: 214 AKDIKAWG------LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTF 267

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             LI+G C  ++   A R+F EM  QG+  SVVT+N ++  LC   K++E  +L++ M  
Sbjct: 268 GVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMED 327

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G+ PN  T+  ++ GFC  G +  A +    M     + D V YNILI+ Y +  ++E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+++   M  KGI P V TYN L  G         A  L DEM+  G+ AD  TY   I 
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LC  G + +AV+L   +  +  E +   YN +I G C  G +K A+E+   +       
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           NVVTYN+ I+  C  G+MD+A DL  +M +    P+ IT++ +  G +
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMM 555



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/448 (32%), Positives = 222/448 (49%), Gaps = 18/448 (4%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +L +  +  P+ +++  L  LA   H   R       P+  + N L+       RV L  
Sbjct: 126 VLALARASQPLRAYDAFL--LAGESHPRHR-------PSTSSVNALLAGLVGAKRVDLAE 176

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
            AF   LR   +P+  TFN++I GL    ++ +A  +   +KA+G  P+V TYN+LI+G 
Sbjct: 177 KAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGY 236

Query: 177 CRTGHT--MIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           C+ G    M  ++ L +EM     E G+   P  VT+  +I+G CK      A  +F +M
Sbjct: 237 CKKGGAGNMYHVDMLLKEMV----EAGI--SPTAVTFGVLINGYCKNSNTAAAVRVFEEM 290

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           K + I   VVTYNSLI GLC      E  +L  EM D G+ P+ +TF  ++   CK   M
Sbjct: 291 KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMM 350

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            +A+  +D M +R V P+   YN L+D +  +GK+  A  +  +M   G   +  +YN L
Sbjct: 351 ADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCL 410

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I G+ ++ +   A  L  EM  KGI+  VVTYN L   L    +V  A+KL DEM   G+
Sbjct: 411 ITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  TY T I G C  G I  A E+   +   +   ++  YN  I   C+ G++  A +
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
           L   +    LVPN +TY  + +G+   G
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 201/398 (50%), Gaps = 9/398 (2%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+  + N L+ GL       +A   F               P+  T++T+I GLC+ G 
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRR------VSPDIYTFNTVISGLCRIGQ 206

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCH---ANDWNEAKRLFIEMMDQGVQPSVVT 279
           + KA  +   +K   + P V TYNSLI G C    A +      L  EM++ G+ P+ VT
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVT 266

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           F V+++  CKN     A R+ + M Q+G+  +  TYN+L+ G C  GK+    +L   ME
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            +G   +++++  ++ G+CK   + +A      M  + ++P VV YN L      + ++E
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+ + + M + G++ +  TY   I G  ++G    A  L   ++    E D+  YN LI
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
             LC  G ++ A +L   +    L PN +TYN +IQG C+ G +  A ++   ME+    
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKR 506

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +V+T+++ I  F +I +  + N+LL++M +K ++P+ 
Sbjct: 507 ANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNG 544



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 188/385 (48%), Gaps = 51/385 (13%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAK----NKHYDTR--LNATGLFPNLYTYNILINCFC 107
           F   LR   SP  + +FN +++ L +     K  D    + A GL P++ TYN LI+ +C
Sbjct: 179 FRSALRRRVSPD-IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 108 KIGRVSLGF---IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           K G     +   +    ++ +  +P A TF  LI G    S    A  +F ++K  G   
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V+TYN+LI+GLC  G     + L EEM     ++G+   PN +T+  ++ G CK+G + 
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEITFGCVLKGFCKKGMMA 351

Query: 225 KAKALFLQMKDENINPDVV-----------------------------------TYNSLI 249
            A      M + N+ PDVV                                   TYN LI
Sbjct: 352 DANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLI 411

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G   + DW  A  L  EM ++G++  VVT+NV++  LC   ++ +A +LLD M + G+ 
Sbjct: 412 TGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLE 471

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TYNT++ GFC  G I  A E+   ME    + + V+YN+ I  +C+  +++EA  L
Sbjct: 472 PNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDL 531

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFE 394
             EM+ K + P  +TY T+  G+ E
Sbjct: 532 LNEMLDKCLVPNGITYETIKEGMME 556



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 153/297 (51%), Gaps = 3/297 (1%)

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +PS  + N ++  L   +++D A +     ++R V P+  T+NT++ G C +G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS---LYREMVSKGIKPTVVTYNTLFL 390
           +   +++ G      +YN LI+GYCK            L +EMV  GI PT VT+  L  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +      A+++F+EM++ G+AA   TY + I GLC  G + E V+L   +  L    
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   + C++ G CK G +  A +    +    + P+VV YNI+I      G+M+ A  + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             M +   +P+V T++ LI GF R  +    + LL +MKEK +  D    ++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 3/135 (2%)

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N L+ GL  + R+  A + F S     + P++ T+N +I GLC  GQ+ KA D+  D++ 
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 516 NAAAPDVITFDMLIHGFIRINEPSK---VNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
              AP V T++ LI G+ +         V+ LL +M E  + P A    ++++   KN  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 573 SLKSLPSFLVQERQG 587
           +  ++  F   ++QG
Sbjct: 280 TAAAVRVFEEMKQQG 294



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 6/122 (4%)

Query: 67  VSSFNILLASLA------KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V ++N+L+ +L       K       ++  GL PN  TYN +I  FC  G +   +    
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRT 498

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R+ +     N  T+N  IK      ++ EA  L  ++      PN ITY T+  G+   G
Sbjct: 499 RMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558

Query: 181 HT 182
           +T
Sbjct: 559 YT 560


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/595 (27%), Positives = 260/595 (43%), Gaps = 98/595 (16%)

Query: 50  AFCIFDYMLRMHPS-PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           AF  F       P+ PPPV  +N++L S  +    D+       +   G+ P  YT N+L
Sbjct: 98  AFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLL 157

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   C  GR       F ++      PN  +F  L++G       M A  L   + +FG 
Sbjct: 158 IAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGV 217

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANG---------NGEIGVVC---------- 203
           +PN + YNTLI+  CR G    A  L E M            N  I  +C          
Sbjct: 218 QPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASR 277

Query: 204 --------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
                         +PN  T++ +++G CKEG +++AK L   MK      ++ +YN  +
Sbjct: 278 IFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWL 337

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            GL       EA+    EM+D+G++P++ +FN +MD LCKN  + +A  ++ LM+  G+ 
Sbjct: 338 LGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIG 397

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH------------------------ 345
           P+  TY+TL+ G C  GK+ +A  +   M   GC                          
Sbjct: 398 PDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKL 457

Query: 346 -----------DDVSYNILINGYCKNKEVEEALSLYREM--------------------- 373
                      D+V+ NI+I+G CK+ +++EA+ +   M                     
Sbjct: 458 LQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDS 517

Query: 374 VSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            S G K  P ++TY+ +  GL +  +++ A K F EM    +  D+  Y TFI   CK+G
Sbjct: 518 SSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHG 577

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            I  A  + + +    C   +Q YN LI GL    ++   + L   +    + PN+ TYN
Sbjct: 578 KISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYN 637

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            MI  LC  G++  A  L  +M +   +P++ +F +LI  F + ++   V E+  
Sbjct: 638 NMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 232/499 (46%), Gaps = 37/499 (7%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAAT---FNSLIKGLHAESRIMEAAALFTKLK 158
           LI    K G   L F  F +  RS    N      +N +++    E ++   + L+  + 
Sbjct: 85  LIRILAKSGLSDLAFSQF-QSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMV 143

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P   T N LI GLC +G    A  +F++M    G  G  C+PN  ++  ++ G C
Sbjct: 144 VAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKM----GVKG--CRPNEFSFGILVRGYC 197

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           + G   +A  L   M    + P+ V YN+LI   C      EA+RL   M + G+ P VV
Sbjct: 198 RAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVV 257

Query: 279 TFNVIMDELCKNRKMDEASRLL-DLMVQRGV---RPNACTYNTLMDGFCLMGKINRAEEL 334
           TFN  +  LC   K+ EASR+  D+ +   +   RPN  T+N +++GFC  G +  A+ L
Sbjct: 258 TFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTL 317

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
             SM+  G   +  SYNI + G  +N ++ EA    +EMV KGI+P + ++NT+  GL +
Sbjct: 318 VESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCK 377

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              +  A  +   M   G+  DT TY+T + G C  G +++A  +   +    C  +   
Sbjct: 378 NGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYT 437

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
            N L+  L K GR+  A +L   +       + VT NI+I GLC  G++D+A ++   M 
Sbjct: 438 CNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMW 497

Query: 515 ENAAA-----------------------PDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            + +A                       PD+IT+ ++I+G  +     +  +   +M  K
Sbjct: 498 IHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK 557

Query: 552 KVMPDASIVSIVVDLLVKN 570
            + PD+ I    +    K+
Sbjct: 558 SLHPDSIIYDTFIHSFCKH 576



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 245/574 (42%), Gaps = 92/574 (16%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + G+ PN   YN LI+ FC+ GR         R+      P+  TFNS I  L +  +
Sbjct: 212 MGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGK 271

Query: 147 IMEAAALFTKLK---AFGC-EPNVITYNTLINGLCRTGHTMIALNLFEEMA-NGN----- 196
           I+EA+ +F  ++     G   PN+ T+N ++ G C+ G    A  L E M  NGN     
Sbjct: 272 ILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELE 331

Query: 197 ----GEIGVV-------------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
                 +G+V                    +PN  +++T++DGLCK G +  A+ +   M
Sbjct: 332 SYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLM 391

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               I PD VTY++L+HG C      +A  +  EMM +G  P+  T N+++  L K  ++
Sbjct: 392 ISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRI 451

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG----------- 342
            EA +LL  M +R    +  T N ++DG C  GK++ A E+   M   G           
Sbjct: 452 FEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSF 511

Query: 343 ------------CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP---------- 380
                       C  D ++Y+I+ING CK   ++EA   + EMV K + P          
Sbjct: 512 IGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIH 571

Query: 381 -------------------------TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
                                    ++ TYN+L LGL   +Q+     L D+M+  G+  
Sbjct: 572 SFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITP 631

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TY   I  LC+ G I +A  L   +       +I ++  LI   CK+       E+F
Sbjct: 632 NICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVF 691

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +   +       Y++M   L   G++ +A++LF    +         ++ LI    + 
Sbjct: 692 -EIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKD 750

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                 +++LHKM +K    D +    V+D L K
Sbjct: 751 EMLENASDILHKMIDKGYRFDPASFMPVIDGLGK 784



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 236/516 (45%), Gaps = 42/516 (8%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +++FN++L    K       K     +   G    L +YNI +    + G++    +A
Sbjct: 293 PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLA 352

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++     PN  +FN+++ GL     I +A  +   + + G  P+ +TY+TL++G C 
Sbjct: 353 LKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCS 412

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           TG  + A N+  EM          C PNT T + ++  L KEG + +A+ L  +M + + 
Sbjct: 413 TGKVLKANNILHEMMRRG------CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSY 466

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRL------------------FIEMMDQGVQ-----P 275
           + D VT N +I GLC +   +EA  +                  FI ++D         P
Sbjct: 467 DLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLP 526

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
            ++T+++I++ LCK  ++DEA +    MV + + P++  Y+T +  FC  GKI+ A  + 
Sbjct: 527 DLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVL 586

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ME  GC     +YN LI G     ++ E   L  +M  KGI P + TYN +   L E 
Sbjct: 587 KDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEG 646

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN---GYIIEAVELFRTLRILKCELDI 452
            +++ A  L DEM + G++ +  ++   I   CK    G + E  E+  ++    C    
Sbjct: 647 GRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI----CGHKE 702

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y+ + + L   G +  A ELF +            YN +I+ LC D  ++ A D+   
Sbjct: 703 ALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHK 762

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           M +     D  +F  +I G  +  +    +EL  +M
Sbjct: 763 MIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERM 798



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 209/413 (50%), Gaps = 10/413 (2%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV-TYSTIIDGLCKEG 221
           E + ++   LI  L ++G + +A + F+   +      V   P  V  Y+ +++   +E 
Sbjct: 76  EVSHVSLIALIRILAKSGLSDLAFSQFQSFRSQ-----VPANPPPVYLYNMVLESSLRED 130

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD    L+  M    ++P+  T N LI GLC +  + +A+ +F +M  +G +P+  +F 
Sbjct: 131 KVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFG 190

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++   C+      A  LLD M   GV+PN   YNTL+  FC  G+   AE L   M   
Sbjct: 191 ILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMRED 250

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMV---SKGI-KPTVVTYNTLFLGLFEIHQ 397
           G   D V++N  I+  C   ++ EA  ++R+M      G+ +P + T+N +  G  +   
Sbjct: 251 GLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGM 310

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E A  L + M+R+G   +  +Y  ++ GL +NG ++EA    + +     E +I ++N 
Sbjct: 311 LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNT 370

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++DGLCK+G +  A  +   +    + P+ VTY+ ++ G C+ G++ KA ++  +M    
Sbjct: 371 VMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG 430

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +P+  T ++L+H   +     +  +LL KM E+    D    +IV+D L K+
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKS 483



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 40/295 (13%)

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
           D+  N     P+L TY+I+IN  CK GR+      F  ++     P++  +++ I     
Sbjct: 516 DSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCK 575

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
             +I  A  +   ++  GC  ++ TYN+LI GL           L ++M     E G+  
Sbjct: 576 HGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMK----EKGIT- 630

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW----- 258
            PN  TY+ +I  LC+ G +  A +L  +M  + I+P++ ++  LI   C A+D+     
Sbjct: 631 -PNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKE 689

Query: 259 -----------------------------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
                                        +EAK LF   +D+        +N ++++LCK
Sbjct: 690 VFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCK 749

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           +  ++ AS +L  M+ +G R +  ++  ++DG    GK + A+EL   M  M  +
Sbjct: 750 DEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE 804


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 220/417 (52%), Gaps = 7/417 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN +I+ FCK  R+        R+ R  F+P+  T N +I     + +I  A  +
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 154 FTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           F +L K   C+P +ITY  LI      G    AL L +EM +   E      P+T TY+ 
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLE------PDTFTYNV 155

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           I  GLCKEG VD+A      +      PDV+TYN L+  L +   W+E ++   E+  +G
Sbjct: 156 ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRG 215

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P+VVT+++++  LC++ K++E+  L+ +M ++G+ P+A  Y+ L+  FC  GK++ A 
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAI 275

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E    M   G   D V+YN ++   CKN   + A+ ++ ++   G  P V +YNT+   L
Sbjct: 276 EFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSAL 335

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           +       AL +  +M   G+  D  TY + I  LC++G + EA+ L   +   + + +I
Sbjct: 336 WSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNI 395

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +Y  ++ GLCK+ R+  A E+  ++      PN  TY ++I+G+   G   +A +L
Sbjct: 396 VSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 219/440 (49%), Gaps = 8/440 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           + P+      LIKG      I +A  +   L+  G +P+V  YN +I+G C+      A 
Sbjct: 6   YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAK 64

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTY 245
            + + M            P+ VT++ +I   C +G +D A  +F ++ KD N  P ++TY
Sbjct: 65  TVLDRMKRKG------FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY 118

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
             LI         +EA +L  EM+ +G++P   T+NVI   LCK  K+D A   +  +  
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNS 178

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           RG +P+  TYN L+      GK +  E+    + S GC+ + V+Y+ILI+  C++ ++EE
Sbjct: 179 RGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEE 238

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           +++L + M  KG+ P    Y+ L        +++ A++  D M  DG   D   Y T + 
Sbjct: 239 SVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMA 298

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
            LCKNG    AVE+F  L  + C  ++ +YN ++  L  SG    A  +   +    + P
Sbjct: 299 ALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDP 358

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           +V+TYN +I  LC DG +D+A  L  DM      P+++++  ++ G  + +      E+L
Sbjct: 359 DVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVL 418

Query: 546 HKMKEKKVMPDASIVSIVVD 565
             M E    P+ +  +++++
Sbjct: 419 AAMIENGCQPNETTYTLLIE 438



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 199/410 (48%), Gaps = 5/410 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL     P+   +N++I G    +RI  A  +  ++K  G  P+V+T+N +I   C  G 
Sbjct: 35  ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +AL +FEE+   N      CKP  +TY+ +I+    EG +D+A  L  +M    + PD
Sbjct: 95  IDLALKVFEELLKDNN-----CKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPD 149

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             TYN +  GLC     + A      +  +G +P V+T+N+++  L    K DE  + + 
Sbjct: 150 TFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMS 209

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            +  RG  PN  TY+ L+   C  GKI  +  L   M+  G   D   Y+ LI  +C+  
Sbjct: 210 EIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG 269

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +++ A+     M+  G  P +V YNT+   L +    +HA+++F ++   G   +  +Y 
Sbjct: 270 KLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYN 329

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T +  L  +G    A+ +   +     + D+  YN LI  LC+ G +  A  L   +  G
Sbjct: 330 TMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSG 389

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
              PN+V+Y  ++ GLC   ++D A ++   M EN   P+  T+ +LI G
Sbjct: 390 RFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG 439



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 200/419 (47%), Gaps = 38/419 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N +++   K    ++      R+   G  P++ T+NI+I  FC  G++ L    
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 119 FGRILR--SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           F  +L+  +C  P   T+  LI+    E  I EA  L  ++ + G EP+  TYN +  GL
Sbjct: 102 FEELLKDNNC-KPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNT 207
           C+ G    A      + +   +  V+                             C+PN 
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           VTYS +I  LC++G ++++  L   MK++ + PD   Y+ LI   C     + A      
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+  G  P +V +N IM  LCKN   D A  +   + + G  PN  +YNT++      G 
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
             RA  +   M S G   D ++YN LI+  C++  V+EA+ L  +M+S   +P +V+Y T
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKT 400

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           + LGL + H+++ A+++   M  +G   +  TYT  I+G+  +G   +A+EL  +L I+
Sbjct: 401 VLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIM 459



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 184/369 (49%), Gaps = 4/369 (1%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +P+ +  + +I G      +DKA  + + + +++  PDV  YN++I G C AN    AK 
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRV-MGILEKHGKPDVFAYNAVISGFCKANRIESAKT 65

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD-LMVQRGVRPNACTYNTLMDGF 322
           +   M  +G  P VVT N+++   C   K+D A ++ + L+     +P   TY  L++ +
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
            L G I+ A +L   M S G + D  +YN++  G CK  +V+ A    R + S+G KP V
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TYN L   L    + +   K   E+   G   +  TY+  I  LC++G I E+V L + 
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDG 501
           ++      D   Y+ LI   C+ G+L  A E   C +  G L P++V YN ++  LC +G
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFL-PDIVNYNTIMAALCKNG 304

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
             D A ++F  ++E    P+V +++ ++       +  +   ++ +M  K + PD    +
Sbjct: 305 NGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYN 364

Query: 562 IVVDLLVKN 570
            ++  L ++
Sbjct: 365 SLISCLCRD 373



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 2/304 (0%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ +  QP V+    ++     +R +D+A+R++ ++ + G +P+   YN ++ GFC   +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYN 386
           I  A+ +   M+  G   D V++NI+I  +C   +++ AL ++ E++     KPT++TY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L         ++ ALKL DEM   G+  DT TY     GLCK G +  A E  RTL   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C+ D+  YN L+  L   G+     +    +      PNVVTY+I+I  LC DG+++++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
            +L   M+E    PD   +D LI  F R  +     E L  M     +PD    + ++  
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 567 LVKN 570
           L KN
Sbjct: 300 LCKN 303



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 149/289 (51%), Gaps = 12/289 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++NILL +L     +D      + + + G  PN+ TY+ILI+  C+ G++      
Sbjct: 183 PDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNL 242

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +     TP+A  ++ LI     E ++  A      +   G  P+++ YNT++  LC+
Sbjct: 243 VKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCK 302

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   A+ +F ++     E+G  C PN  +Y+T++  L   G   +A  +  QM  + I
Sbjct: 303 NGNGDHAVEIFGKL----DEVG--CPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI 356

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PDV+TYNSLI  LC     +EA  L  +M+    QP++V++  ++  LCK  ++D+A  
Sbjct: 357 DPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIE 416

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           +L  M++ G +PN  TY  L++G    G   +A EL  S+  M    +D
Sbjct: 417 VLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISED 465



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 64  PPPVSSFNILLASL-AKNKHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP VSS+N +L++L +    Y      +++ + G+ P++ TYN LI+C C+ G V     
Sbjct: 322 PPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIG 381

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +L   F PN  ++ +++ GL    RI +A  +   +   GC+PN  TY  LI G+ 
Sbjct: 382 LLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIG 441

Query: 178 RTGHTMIALNL 188
            +G    A+ L
Sbjct: 442 FSGSRTQAMEL 452


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 247/471 (52%), Gaps = 26/471 (5%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ATG   N+ TY  LI+ +C+ GR+  +L  IA   +      P+  T+N+++KGL    +
Sbjct: 152 ATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMPV-----APDTYTYNTVLKGLCIAKK 205

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             EA  L  ++    C PN +T+ T I   C+ G    A+ L ++M          C P+
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYG------CTPD 259

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V YST+I+G  ++G VD+A  L   M      P+ V YN+ + GLC A  W +   L  
Sbjct: 260 VVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMA 316

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ +G  P+  TF++++  LC+N  +D A  +L+ M + G  P+   YN +++     G
Sbjct: 317 EMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG 376

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A  L   + SM CK D + +N ++ G+C+ +   +A  L  +M         +T+N
Sbjct: 377 RVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFN 433

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L   L +   V +A ++F++M R     D  TY++ ++G  + G +  A++LFR++   
Sbjct: 434 ILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM--- 490

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C+ DI +YN ++ GLC++ R + A EL   +      PN VT+NI+I  LC  G +D+A
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            ++   M    + PD+ T++ LI+GF   +E  ++++ L  +      PDA
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGF---SEQGRLDDALKLLSTMSCKPDA 598



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 215/472 (45%), Gaps = 53/472 (11%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ YTYN ++   C   +          ++R+   PN  TF + I+       +  A  L
Sbjct: 188 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 247

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++  +GC P+V+ Y+TLING    GH   AL+L   M         +CKPNTV Y+  
Sbjct: 248 LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---------LCKPNTVCYNAA 298

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC     +    L  +M  +  +P+  T++ LI  LC  N  + A  +  +M   G 
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM-------- 325
           +P  V +N+I++ L +  ++D+A RLL+ MV    +P+A  +N ++ GFC          
Sbjct: 359 EPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASE 415

Query: 326 ---------------------------GKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
                                      G +N A ++F  M    C  D V+Y+ L+NG+ 
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 475

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   VE A+ L+R M     KP + +YN +  GL    + E A +L  EM       +  
Sbjct: 476 EQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 532

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+   I+ LC+ G +  A+E+   +       DI  YN LI+G  + GRL  A +L  ++
Sbjct: 533 TFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM 592

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
                 P+ ++YN  ++GLC   +   A +L  +M  N   P+ +TF    H
Sbjct: 593 S---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANH 641



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 224/467 (47%), Gaps = 49/467 (10%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N LIK L A  R+ +A  +   LKA     + +++NTL+ G CR G    A  +      
Sbjct: 94  NILIKKLCATRRLADAERVLDALKAAA-AADAVSHNTLVAGYCRDGRLADAERVL----- 147

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
             G        N VTY+ +IDG C+ G +D A  L   M    + PD  TYN+++ GLC 
Sbjct: 148 --GAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCI 202

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           A  W EA+ L  EM+     P+ VTF   +   C+N  +D A +LLD M + G  P+   
Sbjct: 203 AKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVI 262

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y+TL++GF   G +++A +L   + +M CK + V YN  + G C  +  E+   L  EMV
Sbjct: 263 YSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMV 319

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
            KG  P   T++ L   L + + V+ A+++ ++M++ G   DT  Y   I+ L + G + 
Sbjct: 320 RKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVD 379

Query: 435 EAVELFRTL----------RILK----------------------CELDIQAYNCLIDGL 462
           +A+ L  ++           +LK                      C L    +N LID L
Sbjct: 380 DALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDML 439

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C++G + +A ++F  +P     P++VTY+ ++ G    G ++ A  LF  M      PD+
Sbjct: 440 CQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDI 496

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +++ ++ G  R        EL+ +M  K   P+    +I+++ L +
Sbjct: 497 FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQ 543



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 175/328 (53%), Gaps = 23/328 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  ++F++L++SL +N   D+      ++   G  P+   YNI+IN   + GRV      
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL-- 382

Query: 119 FGRILRSCF-TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             R+L S    P+A  FN+++KG     R  +A+ L  ++    C    +T+N LI+ LC
Sbjct: 383 --RLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLC 440

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A  +FE+M          C P+ VTYS++++G  ++G V+ A  LF  M    
Sbjct: 441 QNGLVNYATQVFEQMPR------YRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP--- 491

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+ +YN+++ GLC A  W +A  L  EM+ +   P+ VTFN++++ LC+   +D A 
Sbjct: 492 CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAI 551

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +L+ M   G  P+  TYN L++GF   G+++ A +L   + +M CK D +SYN  + G 
Sbjct: 552 EVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKGL 608

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTY 385
           C+ +  ++A  L  EM+     P  VT+
Sbjct: 609 CRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 152/290 (52%), Gaps = 8/290 (2%)

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           ++ N+++ +LC  R++ +A R+LD +       +A ++NTL+ G+C  G++  AE + G+
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
             + G   + V+Y  LI+GYC++  +++AL L   + S  + P   TYNT+  GL    +
Sbjct: 150 ARATG-AANVVTYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKK 205

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E A +L  EM R+    +  T+ T I   C+NG +  AV+L   +    C  D+  Y+ 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+G  + G +  A +L  ++   +  PN V YN  ++GLC   + +   +L  +M    
Sbjct: 266 LINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            +P+  TF MLI    + N      E+L +M++    PD    +I+++ L
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSL 372



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 53/268 (19%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLY---------TYNILINCFCKIGRVSLG 115
           P    FN +L    + + +    +A+ L   ++         T+NILI+  C+ G V+  
Sbjct: 392 PDALGFNAVLKGFCRAERWH---DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYA 448

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
              F ++ R   TP+  T++SL+ G   +  +  A  LF   ++  C+P++ +YN ++ G
Sbjct: 449 TQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKG 505

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LCR      A  L  EM      +G  C PN VT++ +I+ LC++G VD+A  +  QM +
Sbjct: 506 LCRAARWEDAGELIAEM------VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPN 559

Query: 236 ENINPDVVTYNSL--------------------------------IHGLCHANDWNEAKR 263
               PD+ TYN+L                                + GLC A  W +A+ 
Sbjct: 560 YGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEE 619

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           L  EM+     P+ VTF      L  NR
Sbjct: 620 LVAEMLRNKCTPNEVTFKYANHLLMPNR 647


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 215/413 (52%), Gaps = 7/413 (1%)

Query: 87   LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
            ++A G++P+  TY  +I  +C+ G V         ++   F  + AT   +I     +S 
Sbjct: 822  MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 881

Query: 147  IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            +  A   F K+   G  PN+I Y+++I+GLC+ G    A  L EEM   NG      KPN
Sbjct: 882  VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK-NG-----WKPN 935

Query: 207  TVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
              T++++I GLCK+G+ ++A  LFL++ + +N  P+V TY ++I G C     + A+ LF
Sbjct: 936  VYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF 995

Query: 266  IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
              M +QG+ P+  T+  ++D  CK     +A  L++LM   G  PN CTYN+++DG C  
Sbjct: 996  ERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 1055

Query: 326  GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            G+   A +L  +      + D V+Y ILI+  CK  ++ +AL    +M   G +P +  Y
Sbjct: 1056 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 1115

Query: 386  NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             TL       + ++ + KLFDE+ + G+A    TYT+ I G C+   +  AV+ F+ +  
Sbjct: 1116 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD 1175

Query: 446  LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
              C  D  +Y  LI GLCK  RL  A +L+ ++    L P  VT   +    C
Sbjct: 1176 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYC 1228



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 204/415 (49%), Gaps = 8/415 (1%)

Query: 143  AESRIMEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
            AE R++E A  +F ++ A G  P+  TY  +I G CR G+ + A     EM     E G 
Sbjct: 807  AEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM----ERGF 862

Query: 202  VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
            V    T+T   II   C++  V++A   F ++    ++P+++ Y+S+I GLC      +A
Sbjct: 863  VVDNATLTL--IITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 920

Query: 262  KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMD 320
              L  EM+  G +P+V T   ++  LCK    + A RL L L+     +PN  TY  ++ 
Sbjct: 921  FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMIS 980

Query: 321  GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            G+C   K++RAE LF  M+  G   +  +Y  LI+G+CK     +A  L   M ++G  P
Sbjct: 981  GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFP 1040

Query: 381  TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
               TYN++  GL +  + E A KL +   ++ + AD  TYT  I   CK   + +A+   
Sbjct: 1041 NTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFL 1100

Query: 441  RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
              +  +  + DI  Y  LI   C+   +K + +LF  +    L P   TY  MI G C +
Sbjct: 1101 NKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE 1160

Query: 501  GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             ++  A   F  M ++  APD I++  LI G  + +   +  +L   M +K + P
Sbjct: 1161 KKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 193/394 (48%), Gaps = 10/394 (2%)

Query: 86   RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            ++   GL PNL  Y+ +I+  CK G V   F     ++++ + PN  T  SLI GL  + 
Sbjct: 891  KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 950

Query: 146  RIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
                A  LF KL ++   +PNV TY  +I+G C+      A  LFE M     E G+V  
Sbjct: 951  WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMK----EQGLV-- 1004

Query: 205  PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
            PNT TY+T+IDG CK G   KA  L   M +E   P+  TYNS++ GLC      EA +L
Sbjct: 1005 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 1064

Query: 265  FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
                    ++   VT+ +++ E CK   M++A   L+ M + G +P+   Y TL+  FC 
Sbjct: 1065 LNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCR 1124

Query: 325  MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
               +  +E+LF  +  +G      +Y  +I GYC+ K+V  A+  +++M   G  P  ++
Sbjct: 1125 QNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSIS 1184

Query: 385  YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            Y  L  GL +  +++ A +L+D M   G++    T  T     CK      A+ +   L 
Sbjct: 1185 YGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVI---LE 1241

Query: 445  ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
             L  +L I+  + LI  LC   ++  A   F  L
Sbjct: 1242 RLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKL 1275



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 1/345 (0%)

Query: 221  GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
            G + +A  + L M+++ +       N +I           A  +F EM  +GV P   T+
Sbjct: 775  GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 281  NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
              I+   C+N  + EA R +  M++RG   +  T   ++  FC    +NRA   F  +  
Sbjct: 835  KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 341  MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            MG   + ++Y+ +I+G CK   V++A  L  EMV  G KP V T+ +L  GL +    E 
Sbjct: 895  MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 954

Query: 401  ALKLFDEMQR-DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A +LF ++ R D    +  TYT  I G CK   +  A  LF  ++      +   Y  LI
Sbjct: 955  AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 1014

Query: 460  DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            DG CK+G    A+EL   + +    PN  TYN ++ GLC  G+ ++A  L     +N   
Sbjct: 1015 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 1074

Query: 520  PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
             D +T+ +LI    +  + ++    L+KM +    PD  + + ++
Sbjct: 1075 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLI 1119



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 1/279 (0%)

Query: 292  KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            K+ EA  ++  M  +G+       N ++     M  +  A  +F  M + G   D  +Y 
Sbjct: 776  KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 835

Query: 352  ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
             +I GYC+N  V EA     EM+ +G      T   +     E   V  A+  F ++ + 
Sbjct: 836  YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 895

Query: 412  GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            G++ +   Y++ I GLCK G + +A EL   +     + ++  +  LI GLCK G  + A
Sbjct: 896  GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 955

Query: 472  WELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
            + LF  L       PNV TY  MI G C + ++ +A  LF  M+E    P+  T+  LI 
Sbjct: 956  FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 1015

Query: 531  GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            G  +    SK  EL+  M  +   P+    + +VD L K
Sbjct: 1016 GHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCK 1054



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 26/180 (14%)

Query: 91   GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
            G  P+++ Y  LI  FC+   +      F  +++    P   T+ S+I G   E ++  A
Sbjct: 1107 GFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLA 1166

Query: 151  AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---GEIGVV----- 202
               F K+   GC P+ I+Y  LI+GLC+      A  L++ M +      E+  V     
Sbjct: 1167 VKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYE 1226

Query: 203  -CKPNTV-----------------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
             CK                     T  T+I  LC E  V  A   F ++ D+ +N D VT
Sbjct: 1227 YCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVT 1286


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 270/555 (48%), Gaps = 26/555 (4%)

Query: 9   RSFSFASAPISA-FRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           R  + +  P+   F   F SLL HF            +TP     +F +M    P  P  
Sbjct: 79  RLHALSPPPLRPLFDRTFRSLLTHFSRY--------ALTP-LMLRLFAHMYHHGPPAPTG 129

Query: 68  SSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           +++N L+ +L +       + Y + +  +G  P+ +T+N LI  +C+  ++ +    F +
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDK 189

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +    F+ +A ++ +LI+G     R+ EA  LF +L+    +P++ T+  L+ GLC    
Sbjct: 190 MPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARR 245

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
               L + ++M     E+G   +P T  Y+ ++D  C+E   ++A+ +  +M D  + P 
Sbjct: 246 GEEGLYMLQKMK----ELG--WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPC 299

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VT  ++++  C     + A R+F  M  +G +P+V T+N ++   C   K+ +A  LLD
Sbjct: 300 AVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLD 359

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M + GV P+  TYN L+ G C+ G I  A  L   ME  G   D  +YN+LI+  CK  
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           +V+EA SL+  +  +GI+P  VT+NT+  GL +  + + A    ++M   G A DT TY+
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYS 479

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
            FI+ LCK     E +     +     +     Y  +ID L K      A  ++  +   
Sbjct: 480 PFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+VVTY   ++  CN+G++ +A ++ ++M++     D + ++ LI G   I +    
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599

Query: 542 NELLHKMKEKKVMPD 556
             +L  M     MP+
Sbjct: 600 VTILKHMTGVASMPN 614



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 245/534 (45%), Gaps = 61/534 (11%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKGLHAESRIME 149
           GL P   T   ++N +C+ GR+S     F  + L+ C  PN  T+N++++G     ++ +
Sbjct: 295 GLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGC-EPNVWTYNAMVQGFCNVGKVYK 353

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A AL  +++  G EP+V+TYN LI G C  GH   A  L   M  GNG        +  T
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM-EGNG-----LAADQYT 407

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +ID LCK G VD+A +LF  ++   I P+ VT+N++I+GLC    ++ A     +M+
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P   T++  ++ LCK +   E    +D M+Q+ V+P+   Y  ++D         
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  ++G M S+GC  D V+Y   +  YC    + EA ++  EM   GI    + YNTL 
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587

Query: 390 LGLFEIHQVEHAL----------------------------------------------- 402
            G   I + +HA+                                               
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647

Query: 403 ----KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
               +LF+ M+++ V +  R Y   ++G  +   + E   L   ++     L+   Y  L
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707

Query: 459 IDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++  CK      AW L CS+  HG L PN+++Y  ++ G   +GQ D+A+++F  +    
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHGFL-PNLISYQYLLSGFTAEGQADRAKEIFRGLRWKE 766

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              D I + ++I G IR   P   ++++  +++ K  P     +++ + L   E
Sbjct: 767 YNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEELSTRE 820



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 197/439 (44%), Gaps = 11/439 (2%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCE-PNVITYNTLINGLCRTGHTMIALNLFEE 191
           TF SL+      +       LF  +   G   P   TYN LI  LCR      A      
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
           M           +P+  T++++I G C+   +D A+ LF +M     + D V+Y +LI G
Sbjct: 155 MVRSGW------RPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEG 208

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
            C     +EA  LF E+     QP + T   ++  LC  R+ +E   +L  M + G RP 
Sbjct: 209 FCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPA 264

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
              Y  L+D +C   K   AE++   M   G     V+   ++N YC+   +  A+ ++ 
Sbjct: 265 TRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFE 324

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            M  KG +P V TYN +  G   + +V  A+ L D+M+  GV  D  TY   I G C +G
Sbjct: 325 SMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           +I  A  L R +       D   YN LID LCK+G++  A  LF  L +  + PN VT+N
Sbjct: 385 HIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFN 444

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I GLC  G+ D A      M     APD  T+   I    +     +    + +M +K
Sbjct: 445 TVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQK 504

Query: 552 KVMPDASIVSIVVDLLVKN 570
            V P     +IV+D L K 
Sbjct: 505 DVKPSTVNYTIVIDRLFKE 523



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 194/427 (45%), Gaps = 10/427 (2%)

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T+ +L+    R   T + L LF  M +          P   TY+ +I  LC+   +  A+
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPP-----APTGATYNALIRALCRRADLRHAQ 149

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
                M      PD  T+NSLI G C     + A+ LF +M  +G     V++  +++  
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGF 209

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C+  ++DEA  L   + Q    P+  T+  L+ G C   +      +   M+ +G +   
Sbjct: 210 CETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPAT 265

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            +Y  L++ +C+ ++ EEA  +  EM   G+ P  VT   +        ++  A+++F+ 
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+  G   +  TY   + G C  G + +A+ L   +R    E D+  YN LI G C  G 
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++ A+ L   +    L  +  TYN++I  LC  G++D+A  LF  +E     P+ +TF+ 
Sbjct: 386 IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT 445

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +I+G  +  +       L KM      PD    S  ++ L K + S + L SF+ +  Q 
Sbjct: 446 VINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL-SFIDEMLQK 504

Query: 588 EVGESNV 594
           +V  S V
Sbjct: 505 DVKPSTV 511



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 198/481 (41%), Gaps = 64/481 (13%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGL 92
           +G  NV    +A  + D M R     P V ++N+L+     + H ++       +   GL
Sbjct: 343 QGFCNVGKVYKAMALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGL 401

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
             + YTYN+LI+  CK G+V      F  +      PN+ TFN++I GL    +   A  
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACT 461

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
              K+ + GC P+  TY+  I  LC+T  +   L+  +EM   +       KP+TV Y+ 
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD------VKPSTVNYTI 515

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +ID L KE     A  ++ QM     +PDVVTY + +   C+    +EA+ + +EM   G
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLL-------------------------------- 300
           +    + +N ++D      K D A  +L                                
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVP 635

Query: 301 -------------------DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
                              +LM +  V  +A  Y  +++GF    +++    L   M+  
Sbjct: 636 LKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKED 695

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               ++  Y  L+N +CK +   +A +L   M+  G  P +++Y  L  G     Q + A
Sbjct: 696 DLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRA 755

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++F  ++      D   +   IDGL + G+     ++   L  +KC+   + Y  L + 
Sbjct: 756 KEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEE 815

Query: 462 L 462
           L
Sbjct: 816 L 816


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 258/534 (48%), Gaps = 31/534 (5%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN+L+ SL +++ +D       ++   G  PN +T  IL+   C+ G V      
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
                 SC   N   +N+L+     E    EA  L  ++   G  P+V+T+N+ I+ LCR
Sbjct: 208 VNNN-NSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCR 266

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  M A  +F +M   + E+G+  +PN VT++ ++ G CK G +  A+ L   MK    
Sbjct: 267 AGKVMEASRIFRDM-QMDAELGLP-RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGN 324

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              +  YN  + GL    +  EA+ +  EM+ +G++P+  T+N++MD LC+N  + +A  
Sbjct: 325 FDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG 384

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+DLM++ GV P+   Y+TL+ G+C  GK+  A+ +   M   GC+ +  + N L++   
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA--- 415
           K     EA  + ++M  K  +P  VT N +  GL    +++ A ++  EM  +G  +   
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504

Query: 416 -------------------DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
                              D  TYTT I+GLCK G + EA + F  +       D   Y+
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
             I   CK G++  A+ +   +        + TYN +I GL ++ Q+ +   L  +M+E 
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +PD+ T++ +I       +      LLH+M +K + P+ S   I++    K+
Sbjct: 625 GISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKS 678



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 179/586 (30%), Positives = 267/586 (45%), Gaps = 80/586 (13%)

Query: 61  HPSPPPVSSFNILLASLAKNK----HYDT-RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           H + P + S   +LA L        H+ + R     L P+L  YN+L+    +  R    
Sbjct: 75  HIAHPSLISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFV 134

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLIN 174
              +  +L +   P   TFN LI  L  ESR  + A  LF K+   GC PN  T   L+ 
Sbjct: 135 SWLYSDMLAARVAPQTYTFNLLIHSL-CESRAFDHALQLFEKMPQKGCCPNEFTLGILVR 193

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GLCR G    AL    E+ N N    +    N V Y+T++   C+E   ++A+ L  +M 
Sbjct: 194 GLCRAGLVKQAL----ELVNNNNSCRIA---NRVVYNTLVSRFCREEMNNEAERLVERMN 246

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGV---QPSVVTFNVIMDELCK- 289
           +  + PDVVT+NS I  LC A    EA R+F +M MD  +   +P+VVTFN+++   CK 
Sbjct: 247 ELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKH 306

Query: 290 ----------------------------------NRKMDEASRLLDLMVQRGVRPNACTY 315
                                             N ++ EA  +LD MV +G+ PNA TY
Sbjct: 307 GMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTY 366

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N +MDG C    ++ A  L   M   G   D V+Y+ L++GYC   +V EA S+  EM+ 
Sbjct: 367 NIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIR 426

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G +P   T NTL   L++  +   A ++  +M       DT T    ++GLC+NG + +
Sbjct: 427 NGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDK 486

Query: 436 AVELFRTL----------------------RILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           A E+   +                       +  C  D   Y  LI+GLCK GRL+ A +
Sbjct: 487 ASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKK 546

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
            F  +    L P+ VTY+  I   C  G++  A  +  DME N  +  + T++ LI G  
Sbjct: 547 KFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLG 606

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL-----VKNEISL 574
             N+  ++  L  +MKEK + PD    + ++  L      K+ ISL
Sbjct: 607 SNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISL 652



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 248/537 (46%), Gaps = 39/537 (7%)

Query: 65  PPVSSFNILLASL--------AKNKHYDTRLNAT-GL-FPNLYTYNILINCFCKIGRVSL 114
           P V +FN  +++L        A     D +++A  GL  PN+ T+N+++  FCK G +  
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGD 311

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                  + +     +   +N  + GL     ++EA  +  ++ A G EPN  TYN +++
Sbjct: 312 ARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMD 371

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GLCR      A  L + M       GV   P+TV YST++ G C  G V +AK++  +M 
Sbjct: 372 GLCRNHMLSDARGLMDLMMRN----GVY--PDTVAYSTLLHGYCSRGKVFEAKSVLHEMI 425

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                P+  T N+L+H L       EA+ +  +M ++  QP  VT N++++ LC+N ++D
Sbjct: 426 RNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELD 485

Query: 295 EASRLLDLMVQRGVR----------------------PNACTYNTLMDGFCLMGKINRAE 332
           +AS ++  M   G                        P+  TY TL++G C +G++  A+
Sbjct: 486 KASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAK 545

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           + F  M +   + D V+Y+  I  +CK  ++  A  + ++M   G   T+ TYN L LGL
Sbjct: 546 KKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGL 605

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
              +Q+     L DEM+  G++ D  TY   I  LC+ G   +A+ L   +       ++
Sbjct: 606 GSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNV 665

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            ++  LI    KS   K A ELF  +   +       Y++M   L   GQ+ +A++LF  
Sbjct: 666 SSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYSLMFNELLAGGQLSEAKELFEV 724

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +         +  LI    +    +  N LL+K+ +K    D +    V+D L K
Sbjct: 725 SLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSK 781



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 208/448 (46%), Gaps = 24/448 (5%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY-DTR-----LNATGLFPNLYTYNIL 102
           EA  + D M+      P   ++NI++  L +N    D R     +   G++P+   Y+ L
Sbjct: 346 EARLVLDEMV-AKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTL 404

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++ +C  G+V         ++R+   PN  T N+L+  L  E R +EA  +  K+     
Sbjct: 405 LHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCY 464

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMA--------NGNGEIGVV--------CKPN 206
           +P+ +T N ++NGLCR G    A  +  EM          GN    ++        C P+
Sbjct: 465 QPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPD 524

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +TY+T+I+GLCK G +++AK  F++M  +N+ PD VTY++ I   C     + A R+  
Sbjct: 525 GITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLK 584

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M   G   ++ T+N ++  L  N ++ E   L D M ++G+ P+ CTYN ++   C  G
Sbjct: 585 DMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGG 644

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K   A  L   M   G   +  S+ ILI  + K+ + + A  L+ E+           Y+
Sbjct: 645 KAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYS 703

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +F  L    Q+  A +LF+      +      Y   I  LC++  + +A  L   L   
Sbjct: 704 LMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDK 763

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWEL 474
               D  ++  +IDGL K G  + A EL
Sbjct: 764 GYGFDHASFMPVIDGLSKRGNKRQADEL 791



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 179/372 (48%), Gaps = 9/372 (2%)

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDE--NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +++  L + G VD A   F  ++ +  +++P +  YN L+      +       L+ +M+
Sbjct: 83  SMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDML 142

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
              V P   TFN+++  LC++R  D A +L + M Q+G  PN  T   L+ G C  G + 
Sbjct: 143 AARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVK 202

Query: 330 RAEELFGSMESMGCK-HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           +A EL  +  S  C+  + V YN L++ +C+ +   EA  L   M   G+ P VVT+N+ 
Sbjct: 203 QALELVNNNNS--CRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSR 260

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTR----TYTTFIDGLCKNGYIIEAVELFRTLR 444
              L    +V  A ++F +MQ D      R    T+   + G CK+G + +A  L  T++
Sbjct: 261 ISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMK 320

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +     ++ YN  + GL ++G L  A  +   +    + PN  TYNIM+ GLC +  + 
Sbjct: 321 KVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLS 380

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            AR L   M  N   PD + +  L+HG+    +  +   +LH+M      P+    + ++
Sbjct: 381 DARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLL 440

Query: 565 DLLVKNEISLKS 576
             L K   +L++
Sbjct: 441 HSLWKEGRTLEA 452



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 34/260 (13%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A  L P+  TY+  I  FCK G++S  F     + R+  +    T+N+LI GL + ++I 
Sbjct: 553 AKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIF 612

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV------- 201
           E   L  ++K  G  P++ TYN +I  LC  G    A++L  EM +      V       
Sbjct: 613 EIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILI 672

Query: 202 ---------------------VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                                +C      YS + + L   G + +AK LF    D  +  
Sbjct: 673 KAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTL 732

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK---NRKMDE-A 296
               Y  LI  LC      +A  L  +++D+G      +F  ++D L K    R+ DE A
Sbjct: 733 KNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELA 792

Query: 297 SRLLDLMVQRGVRPNACTYN 316
            R+++L ++   RP   TY+
Sbjct: 793 KRMMELELED--RPVDRTYS 810



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LI  LC+S     A +LF  +P     PN  T  I+++GLC  G + +A +L ++ 
Sbjct: 152 TFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL-VNN 210

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
             +    + + ++ L+  F R    ++   L+ +M E  V+PD    +  +  L +    
Sbjct: 211 NNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKV 270

Query: 574 LKSLPSFLVQERQGEVG 590
           +++   F   +   E+G
Sbjct: 271 MEASRIFRDMQMDAELG 287


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 228/460 (49%), Gaps = 4/460 (0%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y+++I   C+ G  S        +     T +    N +I  +  +  + E   +  KL 
Sbjct: 154 YHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLP 213

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTII 214
            FGCE ++++YN ++ GLC          L +EM   +  +  +    C P+   Y+TII
Sbjct: 214 LFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATII 273

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           DG+CKEG  + A  +  +M    + P+VV YN+++ G+C A+ W +A+ L  EM  +   
Sbjct: 274 DGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCP 333

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
              VTFN+++D  C+N  +D    LL+ M++ G  P+  TY T+++GFC  G I+ A  L
Sbjct: 334 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 393

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
             +M S GCK + +SY I++ G C  +   +A  L   M+ +G  P  VT+NT+   L +
Sbjct: 394 LKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCK 453

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              VE A++L  +M  +G   D  +Y+T IDGL K G   EA+EL   +       ++  
Sbjct: 454 KGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVIT 513

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y+ +   L + GR+    ++F ++    +  + V YN +I  LC   + D A D    M 
Sbjct: 514 YSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMV 573

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            N   P+  T+  LI G        +  +LL ++  ++ +
Sbjct: 574 SNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAV 613



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 246/524 (46%), Gaps = 56/524 (10%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAES 145
           L+A G    +  YN ++  +C++G+V     A  R+  +    PNA T+  +++GL    
Sbjct: 75  LDAAGNAAGVVDYNAMVAGYCRVGQVE----AARRLAAAVPVPPNAYTYFPVVRGLCGRG 130

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           RI +A A+  ++ +  C P    Y+ +I   CR+G    AL + E +      +      
Sbjct: 131 RIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTL------ 184

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +T   + +I+ +C +G VD+   +  ++       D+V+YN+++ GLC A  W + + L 
Sbjct: 185 DTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELM 244

Query: 266 IEMM----------DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
            EM+            G  P +  +  I+D +CK    + A+ +L  M   G++PN   Y
Sbjct: 245 DEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCY 304

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL---------------------- 353
           NT++ G C   +  +AEEL   M    C  DDV++NIL                      
Sbjct: 305 NTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 364

Query: 354 -------------INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
                        ING+CK   ++EA+ L + M S G KP  ++Y  +  GL    +   
Sbjct: 365 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVD 424

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A +L   M + G   +  T+ T I+ LCK G + +A+EL + + +  C  D+ +Y+ +ID
Sbjct: 425 AEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVID 484

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GL K+G+ + A EL   + +  + PNV+TY+ M   L  +G++DK   +F ++++     
Sbjct: 485 GLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRS 544

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           D + ++ +I    +  E     + L  M     MP+ S  + ++
Sbjct: 545 DAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALI 588



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 236/482 (48%), Gaps = 25/482 (5%)

Query: 49  EAFCIFDYMLRMHPSP-PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNI 101
           +A  + D M      P PP+  +++++ S  ++  Y + L      +A G   +    N+
Sbjct: 134 DALAVLDEMTSRSCVPIPPM--YHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNL 191

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-------- 153
           +IN  C  G V  G     ++       +  ++N+++KGL A  R  +   L        
Sbjct: 192 VINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVH 251

Query: 154 --FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
              +++   GC P++  Y T+I+G+C+ GH  +A  +   M +     G+  KPN V Y+
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPS----YGL--KPNVVCYN 305

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++ G+C     +KA+ L  +M  +N   D VT+N L+   C     +    L  +M++ 
Sbjct: 306 TVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 365

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P V+T+  +++  CK   +DEA  LL  M   G +PN  +Y  ++ G C   +   A
Sbjct: 366 GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDA 425

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           EEL   M   GC  + V++N +IN  CK   VE+A+ L ++M+  G  P +++Y+T+  G
Sbjct: 426 EELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDG 485

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L +  + E AL+L + M   G+  +  TY++    L + G I + +++F  ++      D
Sbjct: 486 LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSD 545

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YN +I  LCK      A +    +     +PN  TY  +I+GL ++G + +A+DL  
Sbjct: 546 AVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLS 605

Query: 512 DM 513
           ++
Sbjct: 606 EL 607



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 191/455 (41%), Gaps = 68/455 (14%)

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEI-----------------------GVVCKPN 206
           + LI  LC  G T  A+   +   N  G +                        V   PN
Sbjct: 56  SALIRSLCVAGRTADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVPVPPN 115

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF- 265
             TY  ++ GLC  G +  A A+  +M   +  P    Y+ +I   C +  ++ A R+  
Sbjct: 116 AYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLE 175

Query: 266 ------------------------------IEMMDQ----GVQPSVVTFNVIMDELCKNR 291
                                         +EM+ +    G +  +V++N ++  LC  +
Sbjct: 176 ALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAK 235

Query: 292 KMDEASRLLDLMV----------QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +  +   L+D MV          Q G  P+   Y T++DG C  G    A E+   M S 
Sbjct: 236 RWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSY 295

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G K + V YN ++ G C     E+A  L  EM  K      VT+N L     +   V+  
Sbjct: 296 GLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRV 355

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++L ++M   G   D  TYTT I+G CK G I EAV L + +    C+ +  +Y  ++ G
Sbjct: 356 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKG 415

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC + R   A EL   +     +PN VT+N +I  LC  G +++A +L   M  N   PD
Sbjct: 416 LCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPD 475

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +I++  +I G  +  +  +  ELL+ M  K + P+
Sbjct: 476 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 510



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 18/321 (5%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLY---------TYNILINCFCKIGRVSLG 115
           P V  +N +L  +     ++    A  L   +Y         T+NIL++ FC+ G V   
Sbjct: 299 PNVVCYNTVLKGICSADRWE---KAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRV 355

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++L     P+  T+ ++I G   E  I EA  L   + + GC+PN I+Y  ++ G
Sbjct: 356 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKG 415

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC T   + A  L   M      I   C PN VT++TII+ LCK+G V++A  L  QM  
Sbjct: 416 LCSTERWVDAEELMSRM------IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLV 469

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
              NPD+++Y+++I GL  A    EA  L   M+++G+ P+V+T++ +   L +  ++D+
Sbjct: 470 NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDK 529

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
             ++ D +    +R +A  YN ++   C   + + A +    M S GC  ++ +Y  LI 
Sbjct: 530 VIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIK 589

Query: 356 GYCKNKEVEEALSLYREMVSK 376
           G      + EA  L  E+ S+
Sbjct: 590 GLASEGLLCEAQDLLSELCSR 610



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 139/347 (40%), Gaps = 86/347 (24%)

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE----------- 364
           + L+   C+ G   R  +   ++++ G     V YN ++ GYC+  +VE           
Sbjct: 56  SALIRSLCVAG---RTADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVPV 112

Query: 365 ---------------------EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
                                +AL++  EM S+   P    Y+ +            AL+
Sbjct: 113 PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALR 172

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC------ 457
           + + +   G   DT      I+ +C  G + E +E+ R L +  CE DI +YN       
Sbjct: 173 VLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC 232

Query: 458 ---------------------------------------LIDGLCKSGRLKFAWELFCSL 478
                                                  +IDG+CK G  + A E+   +
Sbjct: 233 AAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRM 292

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
           P   L PNVV YN +++G+C+  + +KA +L  +M +     D +TF++L+  F +    
Sbjct: 293 PSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLV 352

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD------LLVKNEISLKSLPS 579
            +V ELL +M E   MPD    + V++      L+ +  + LK++PS
Sbjct: 353 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPS 399


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 255/502 (50%), Gaps = 15/502 (2%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           A  +F  M    PSP  V+ F++L+   +KN   +       ++ + GL P+++  + +I
Sbjct: 357 ALDLFYKMENEGPSPNSVT-FSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTII 415

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             + K  +       F     +    N    N+++  L  + +I +A  L  K+++ G  
Sbjct: 416 QGWLKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIG 474

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PNV++YN ++   CR  +  +A  +F  M     E G+  KPN  TYS +IDG  K    
Sbjct: 475 PNVVSYNNVMLAHCRKKNMDLARTVFSNML----EKGL--KPNNYTYSILIDGCFKNHDE 528

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNV 282
                +  QM   NI  + V Y ++I+GLC     ++A+ L   M+++     S +++N 
Sbjct: 529 QNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNS 588

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           I+D   K  +MD A    + M   G+ PN  TY +LMDG C   ++++A E+   M++ G
Sbjct: 589 IIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG 648

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            K D  +Y  LI+G+CK   +E A +L+ E++ +G+ P+   YN+L  G   +  +  AL
Sbjct: 649 VKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAAL 708

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L+ +M +DG+  D  TYTT IDGL K G +I A +L+  ++ +    D   Y  +++GL
Sbjct: 709 DLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGL 768

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
            K G+     ++F  +    + PNV+ YN +I G   +G +D+A  L  +M +    PD 
Sbjct: 769 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 828

Query: 523 ITFDMLIHGFIRINEPSKVNEL 544
            TFD+L+ G +   +P +   L
Sbjct: 829 ATFDILVSGKVGKFQPIRAASL 850



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 265/543 (48%), Gaps = 50/543 (9%)

Query: 64  PPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +  +++LAS+ +    D       + + G+  N+     LI   CK   +      
Sbjct: 301 PSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDL 360

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++     +PN+ TF+ LI+       + +A   + K+++ G  P+V   +T+I G  +
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 AL LF+E    + E G+    N    +TI+  LCK+G +DKA  L  +M+   I
Sbjct: 421 GQKHEEALKLFDE----SFETGLA---NVFICNTILSWLCKQGKIDKATELLRKMESRGI 473

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+VV+YN+++   C   + + A+ +F  M+++G++P+  T+++++D   KN        
Sbjct: 474 GPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLE 533

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM--ESMGCKHDDVSYNILING 356
           +++ M    +  N   Y T+++G C +G+ ++A EL  +M  E   C    +SYN +I+G
Sbjct: 534 VVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCV-SCMSYNSIIDG 592

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           + K  E++ A++ Y EM + GI P V+TY +L  GL + ++++ AL++ DEM+  GV  D
Sbjct: 593 FIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLD 652

Query: 417 TRTYTTFIDGLCKN-----------------------------------GYIIEAVELFR 441
              Y   I G CK                                    G ++ A++L++
Sbjct: 653 IPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYK 712

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +       D+  Y  LIDGL K G L  A +L+  +    LVP+ + Y +++ GL   G
Sbjct: 713 KMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKG 772

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           Q  K   +F +M++N   P+V+ ++ +I G  R     +   L  +M +K ++PD +   
Sbjct: 773 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 832

Query: 562 IVV 564
           I+V
Sbjct: 833 ILV 835



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 256/538 (47%), Gaps = 48/538 (8%)

Query: 69  SFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +FN LL + +K++  D  ++        G+ P +   N  ++   +   ++     + R+
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +      +  T   L++    E +  EA  +F++    G EP+ + Y+  +   C+T + 
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNL 283

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            +A +L  EM         +C P+  TY+++I    K+G ++ A     +M  + I+ +V
Sbjct: 284 AMANSLLREMKEKK-----LCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNV 338

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V   SLI G C  ND   A  LF +M ++G  P+ VTF+V+++   KN +M++A      
Sbjct: 339 VAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKK 398

Query: 303 MVQRGVRPNACTYNTLMDGF----------------------------------CLMGKI 328
           M   G+ P+    +T++ G+                                  C  GKI
Sbjct: 399 MESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKI 458

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           ++A EL   MES G   + VSYN ++  +C+ K ++ A +++  M+ KG+KP   TY+ L
Sbjct: 459 DKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSIL 518

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK- 447
             G F+ H  ++ L++ ++M    +  +   Y T I+GLCK G   +A EL   +   K 
Sbjct: 519 IDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 578

Query: 448 -CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C +   +YN +IDG  K G + +A   +  +    + PNV+TY  ++ GLC + +MD+A
Sbjct: 579 FC-VSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQA 637

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            ++  +M+      D+  +  LIHGF + +     + L  ++ E+ + P   + + ++
Sbjct: 638 LEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLI 695



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 255/544 (46%), Gaps = 57/544 (10%)

Query: 72  ILLASLAKNKHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           ++ ASL + K  +     +R    G  P+   Y++ +   CK    +L       +LR  
Sbjct: 238 LMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCK----TLNLAMANSLLREM 293

Query: 127 F-----TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
                  P+  T+ S+I     +  + +A     ++ + G   NV+   +LI G C+   
Sbjct: 294 KEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNND 353

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL+LF +M N          PN+VT+S +I+   K G ++KA   + +M+   + P 
Sbjct: 354 LGSALDLFYKMENEGP------SPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPS 407

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V   +++I G        EA +LF E  + G+  +V   N I+  LCK  K+D+A+ LL 
Sbjct: 408 VFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLR 466

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M  RG+ PN  +YN +M   C    ++ A  +F +M   G K ++ +Y+ILI+G  KN 
Sbjct: 467 KMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNH 526

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ------------------------ 397
           + +  L +  +M S  I+   V Y T+  GL ++ Q                        
Sbjct: 527 DEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSY 586

Query: 398 ------------VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
                       +++A+  ++EM  +G++ +  TYT+ +DGLCKN  + +A+E+   ++ 
Sbjct: 587 NSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKN 646

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              +LDI AY  LI G CK   ++ A  LF  L    L P+   YN +I G  N G M  
Sbjct: 647 KGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVA 706

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A DL+  M ++    D+ T+  LI G ++       ++L  +M+   ++PD  + +++V+
Sbjct: 707 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVN 766

Query: 566 LLVK 569
            L K
Sbjct: 767 GLSK 770



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 192/436 (44%), Gaps = 43/436 (9%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L    K FG E N   +N L+N   +   T  A+++  +M     E+GV+  P     + 
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQML----ELGVI--PFVPYVNR 202

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            +  L +   + +AK L+ +M    ++ D  T   L+          EA  +F   +++G
Sbjct: 203 TLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERG 262

Query: 273 VQPSVVTFNVIMDELC------------------------------------KNRKMDEA 296
            +P  + +++ +   C                                    K   M++A
Sbjct: 263 AEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDA 322

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            R  D MV  G+  N     +L+ G C    +  A +LF  ME+ G   + V++++LI  
Sbjct: 323 IRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIER 382

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           + KN E+E+AL  Y++M S G+ P+V   +T+  G  +  + E ALKLFDE    G+ A+
Sbjct: 383 FSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-AN 441

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
                T +  LCK G I +A EL R +       ++ +YN ++   C+   +  A  +F 
Sbjct: 442 VFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFS 501

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
           ++    L PN  TY+I+I G   +       ++   M  +    + + +  +I+G  ++ 
Sbjct: 502 NMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVG 561

Query: 537 EPSKVNELLHKMKEKK 552
           + SK  ELL  M E+K
Sbjct: 562 QTSKARELLANMIEEK 577



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 115/297 (38%), Gaps = 39/297 (13%)

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L  S +  G + +  ++N L+N Y K+++ + A+ +  +M+  G+ P V   N     L 
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALV 208

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           + + +  A +L+  M   GV  D  T    +    +     EA+E+F        E D  
Sbjct: 209 QRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSL 268

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVL-VP--------------------------- 485
            Y+  +   CK+  L  A  L   +    L VP                           
Sbjct: 269 LYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDE 328

Query: 486 --------NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
                   NVV    +I G C +  +  A DLF  ME    +P+ +TF +LI  F +  E
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGE 388

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
             K  E   KM+   + P    V  ++   +K +   ++L  F   +   E G +NV
Sbjct: 389 MEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLF---DESFETGLANV 442


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 251/519 (48%), Gaps = 25/519 (4%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----------RLNATGLFPNLYTYNI 101
           +FD +    PSP  V ++ I++    K +H               +   G  P + TY +
Sbjct: 172 LFDDLKNSGPSPN-VYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGV 230

Query: 102 LINCFCKIGRVSLGFIAFGRI--LRSCFTP-NAATFNSLIKGLHAESRIMEAAALFTKLK 158
            I+  C++G +     A+ +I  LRS   P N   +N+LI+G   + R  EA  L  ++K
Sbjct: 231 YIHGLCRVGSIE---DAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMK 287

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P++ +Y+ L+N  C  G     +NL +EM + N       KP  V  ++++ GL 
Sbjct: 288 DEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNK------KPPLVCCTSVLMGLR 341

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            +G V+     F ++  +    D+++Y++LIHG    ++   A  L  EM   G+ P  +
Sbjct: 342 TKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYI 401

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            +  ++ E C+   + EA +    M+Q G++P+  T N ++D +C  G+   A      M
Sbjct: 402 IYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQM 461

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIHQ 397
           +      +  +Y+++IN  CK + VE+A  +   M    I P+V+ Y T+  G   +   
Sbjct: 462 KDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKN 521

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
              A KL+ +M + G   D  T T  +D   K G + +A+ LF+ +       D  A+  
Sbjct: 522 PMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTA 581

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +IDG C+ G +K AW ++  +    + PNV TY  ++ G C   ++D A  L  DM+ N+
Sbjct: 582 IIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNS 641

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             PDV T+  LI G+ RI    +  E+  +MK+K  +PD
Sbjct: 642 VTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPD 680



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 226/507 (44%), Gaps = 45/507 (8%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           +SS N LL  LA+    +        L  +G  PN+YTY I+IN +CK            
Sbjct: 150 ISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCK------------ 197

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRT 179
                                H ++  ME A+L   +++  G  P V+TY   I+GLCR 
Sbjct: 198 -------------------ERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRV 238

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G    A N  +++ + N  + + C      Y+ +I G C++G  D+A  L  +MKDE I+
Sbjct: 239 GSIEDAWNKIQDLRSSNQPLNIYC------YNALIQGFCQKGRPDEALKLLEEMKDEGIS 292

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD+ +Y+ L++  C   D      L  EM     +P +V    ++  L     +++    
Sbjct: 293 PDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNF 352

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              +  +G + +  +Y+TL+ GF     +  A  L   M   G   D + Y  LI  YC+
Sbjct: 353 FHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCR 412

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              ++EAL  +  M+  G++P ++T N +        Q E AL   ++M+   +  ++ T
Sbjct: 413 KGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYT 472

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF-AWELFCSL 478
           Y+  I+ LCK   + +A E+   +        +  Y  ++DG  K  +    AW+L+  +
Sbjct: 473 YSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKM 532

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
           P     P+ VT  +++      G+M KA +LF +M E   + D   F  +I G+ R+   
Sbjct: 533 PKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNV 592

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   +  KMK   V P+    + +VD
Sbjct: 593 KRAWSMYKKMKRNNVTPNVKTYTCLVD 619



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 224/473 (47%), Gaps = 22/473 (4%)

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           C   +A   + LIK   +   + +A  +F + K  G E N+ + N L+  L         
Sbjct: 110 CVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAV 169

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF-----VDKAKALFLQMKDENINP 240
            +LF+++ N          PN  TY+ +I+  CKE       +++A  +  +M+++  NP
Sbjct: 170 RSLFDDLKNSGPS------PNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENP 223

Query: 241 DVVTYNSLIHGLCHA----NDWNEAKRLFIEMMDQGVQP-SVVTFNVIMDELCKNRKMDE 295
            VVTY   IHGLC      + WN+     I+ +    QP ++  +N ++   C+  + DE
Sbjct: 224 TVVTYGVYIHGLCRVGSIEDAWNK-----IQDLRSSNQPLNIYCYNALIQGFCQKGRPDE 278

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A +LL+ M   G+ P+  +Y+ L++ FC  G I     L   ME    K   V    ++ 
Sbjct: 279 ALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLM 338

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G      V + L+ + E+ +KG K  +++Y+TL  G  + H V+ A  L  EM+++G+  
Sbjct: 339 GLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVP 398

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D   Y + I   C+ G + EA++ F T+     + DI   N ++D  C  G+ + A    
Sbjct: 399 DYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYI 458

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR- 534
             +    ++PN  TY+++I  LC    ++KA ++   M ++   P VI +  ++ G+ + 
Sbjct: 459 NQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQ 518

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              P K  +L  KM +    PD   ++++VD+  K     K+L  F     +G
Sbjct: 519 FKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEG 571



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 179/391 (45%), Gaps = 17/391 (4%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLF 93
           EGDI          +   M   +  PP V   ++L+    K    D       L+A G  
Sbjct: 308 EGDIE-----SGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYK 362

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
            +L +Y+ LI+ F K   V         + ++   P+   + SLI+    +  + EA   
Sbjct: 363 HDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKN 422

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +   G +P++IT N +++  C  G    AL    +M + N        PN+ TYS I
Sbjct: 423 FYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQN------ILPNSYTYSVI 476

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA-NDWNEAKRLFIEMMDQG 272
           I+ LCK   V+KA  +   M  +NI P V+ Y +++ G      +  +A +L+ +M   G
Sbjct: 477 INWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLG 536

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P  VT  V++D   K  KM +A  L   M + G+  +   +  ++DG+C +G + RA 
Sbjct: 537 CKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAW 596

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            ++  M+      +  +Y  L++G+CK K ++ A  L  +M    + P V TY  L  G 
Sbjct: 597 SMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGY 656

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
             I  ++ A ++FDEM++ G   D   Y T 
Sbjct: 657 QRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 142/316 (44%), Gaps = 11/316 (3%)

Query: 78  AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
           A N  ++ R N  GL P+   Y  LI  +C+ G +      F  +L+    P+  T N +
Sbjct: 384 ANNLVHEMRKN--GLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHI 441

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           +    +  +  EA     ++K     PN  TY+ +IN LC+      A  +   M   N 
Sbjct: 442 VDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDN- 500

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA--LFLQMKDENINPDVVTYNSLIHGLCHA 255
                  P+ + Y+TI+DG  K+ F +  KA  L+ +M      PD VT   L+      
Sbjct: 501 -----IFPSVIHYTTIMDGYAKQ-FKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKR 554

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
              ++A  LF EM ++G+      F  I+D  C+   +  A  +   M +  V PN  TY
Sbjct: 555 GKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTY 614

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             L+DGFC + +++ A  L   M+      D  +Y  LI GY + + ++ A  ++ EM  
Sbjct: 615 TCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKK 674

Query: 376 KGIKPTVVTYNTLFLG 391
           KG  P  + Y TL LG
Sbjct: 675 KGTLPDHIAYLTLGLG 690


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 271/548 (49%), Gaps = 41/548 (7%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
           P+ A  +F  M  +    P + S+N LL +  + K +             G+ PNL TYN
Sbjct: 94  PDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153

Query: 101 ILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +LI   CK      + GF+ +  + +  F P+  +++++I  L    ++ +A  LF ++ 
Sbjct: 154 VLIKMSCKKKEFEKARGFLNW--MWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMS 211

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEE----------------MANGNGEIGVV 202
                P+V  YN LI+G  +     +A+ L+++                M +G  + G V
Sbjct: 212 ERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRV 271

Query: 203 --C------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             C            + +  TYS++I GLC EG VDKA+++F ++ +     DVVTYN++
Sbjct: 272 DDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTM 331

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           + G C      E+  L+  +M+Q    ++V++N+++  L +N K+DEA+ +  LM  +G 
Sbjct: 332 LGGFCRCGKIKESLELW-RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
             +  TY   + G C+ G +N+A  +   +ES G   D  +Y  +I+  CK + +EEA +
Sbjct: 391 AADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASN 450

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L +EM   G++      N L  GL    ++  A  L   M ++G      +Y   I GLC
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLC 510

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           + G   EA    + +     + D++ Y+ L+ GLC+  +++ A EL+       L P+V+
Sbjct: 511 EAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVM 570

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            +NI+I GLC+ G++D A  +  +ME      +++T++ L+ G+ ++ + ++   +   M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYM 630

Query: 549 KEKKVMPD 556
            +  + PD
Sbjct: 631 YKMGLQPD 638



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 228/472 (48%), Gaps = 43/472 (9%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   ++N+L+       + ++  +LF   +  G  PN+ TYN LI   C+      A   
Sbjct: 112 PGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              M           KP+  +YST+I+ L K G +D A  LF +M +  + PDV  YN L
Sbjct: 172 LNWMWKEG------FKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNIL 225

Query: 249 IHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           I G     D   A +L+ +++ D  V P+V T N+++  L K  ++D+  ++ D M Q  
Sbjct: 226 IDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNE 285

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              +  TY++L+ G C  G +++AE +F  +       D V+YN ++ G+C+  +++E+L
Sbjct: 286 REKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESL 345

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+R M  +     +V+YN L  GL E  +++ A  ++  M   G AAD  TY  FI GL
Sbjct: 346 ELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGL 404

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP-HGV---- 482
           C NGY+ +A+ + + +      LD+ AY  +ID LCK  RL+ A  L   +  HGV    
Sbjct: 405 CVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNS 464

Query: 483 ------------------------------LVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
                                          +P VV+YNI+I GLC  G+  +A     +
Sbjct: 465 HVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKE 524

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           M EN   PD+ T+ +L+ G  R  +     EL H+  +  + PD  + +I++
Sbjct: 525 MLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILI 576



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 224/444 (50%), Gaps = 10/444 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P + +   ++K L +E     A ALF +  +  G   + + Y+ ++  L           
Sbjct: 5   PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGR 64

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYN 246
           + E + +        CK +     ++I    K    D+A  +F +M++     P + +YN
Sbjct: 65  IVELIRSQE------CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYN 118

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +L++    A  W + + LF      GV P++ T+NV++   CK ++ ++A   L+ M + 
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKE 178

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G +P+  +Y+T+++     GK++ A ELF  M       D   YNILI+G+ K K+ + A
Sbjct: 179 GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMA 238

Query: 367 LSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           + L+ +++    + P V T+N +  GL +  +V+  LK++D M+++    D  TY++ I 
Sbjct: 239 MQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIH 298

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC  G + +A  +F  L   K  +D+  YN ++ G C+ G++K + EL+  +     V 
Sbjct: 299 GLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV- 357

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           N+V+YNI+I+GL  +G++D+A  ++  M     A D  T+ + IHG       +K   ++
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVM 417

Query: 546 HKMKEKKVMPDASIVSIVVDLLVK 569
            +++ K    D    + ++D L K
Sbjct: 418 QEVESKGGHLDVYAYASIIDCLCK 441



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 1/196 (0%)

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G   + V Y+ +   L E   V H  ++ + ++      D     + I    KN     A
Sbjct: 38  GYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRA 97

Query: 437 VELFRTLR-ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           +++F+ +R I  CE  I++YN L++   ++ +      LF       + PN+ TYN++I+
Sbjct: 98  LDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             C   + +KAR     M +    PDV ++  +I+   +  +     EL  +M E++V P
Sbjct: 158 MSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAP 217

Query: 556 DASIVSIVVDLLVKNE 571
           D +  +I++D  +K +
Sbjct: 218 DVTCYNILIDGFLKEK 233


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 218/413 (52%), Gaps = 9/413 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R N   L  +  TYN+LI  FC    +   F     +       N  T + +++GL    
Sbjct: 15  RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCG 74

Query: 146 RIMEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           R+ +A   F   L+    +P+V++Y TLINGLC+ G    A +LF +M    G     C+
Sbjct: 75  RVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG-----CR 129

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN  TY+ ++DGLCK+  +D A+A+  + +  +  PDVVTYN+L+  L      +EA   
Sbjct: 130 PNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALAT 189

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +M ++G  P++V+FN I+  LC+ R++ +A  + + M+ R   PN  TY+ ++DG C 
Sbjct: 190 FTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 249

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             +++ A++L   M S GC+ D V+Y  L+ G+     ++ AL L R MVS+G  P VVT
Sbjct: 250 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 309

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  +   L ++ +V+ A ++F E+  +  + +  TY+  I G C+   + E  ++ R   
Sbjct: 310 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE-- 367

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            + C  ++  YN +I GL    R + A+ +F  +     VP+  TY  + + L
Sbjct: 368 -MACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/425 (33%), Positives = 218/425 (51%), Gaps = 24/425 (5%)

Query: 126 CFTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           C  P ++ T+N LI+G    S +  A +L  ++   G + N  T + ++ GLCR G    
Sbjct: 19  CQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQ 78

Query: 185 ALNLFE---EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINP 240
           AL  F+   E+A+         +P+ V+Y+T+I+GLCK G VD A  LF +M       P
Sbjct: 79  ALEHFDASLELAHA--------QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRP 130

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  TYN+L+ GLC  +  + A+ +  E   +   P VVT+N +M  L +  ++DEA    
Sbjct: 131 NAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATF 190

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M + G  P   ++N ++ G C   ++  A E+F  M       + V+Y+++I+G CK+
Sbjct: 191 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKS 250

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++EA  L   MVS+G +P +V Y  L LG     +++ AL L   M   G   D  TY
Sbjct: 251 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 310

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL----KFAWELFC 476
           T  ID LCK G + +A E+FR L   KC  ++  Y+ LI G C++ R+    K   E+ C
Sbjct: 311 TVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMAC 370

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
                   PNVVTYN MI GL    + ++A  +F +M E    PD  T+  L      I+
Sbjct: 371 R-------PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMID 423

Query: 537 EPSKV 541
           +P  V
Sbjct: 424 QPPHV 428



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 201/393 (51%), Gaps = 11/393 (2%)

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +TYN LI G C       A +L  EM       G+ C  N  T S I+ GLC+ G V +A
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREM----DVEGMQC--NDRTTSIILQGLCRCGRVAQA 79

Query: 227 KALF-LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIM 284
              F   ++  +  PDVV+Y +LI+GLC     + A  LF +M+  G  +P+  T+N ++
Sbjct: 80  LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 139

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D LCK  ++D A  ++    +R   P+  TYNTLM     +G+++ A   F  M   G  
Sbjct: 140 DGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYV 199

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              VS+N +I G C+ + + +AL ++ EM+ +   P +VTY+ +  GL +  Q++ A +L
Sbjct: 200 PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQL 259

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
            D M  +G   D   YT  + G    G +  A+ L R +    C  D+  Y  +ID LCK
Sbjct: 260 LDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK 319

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            GR+  A E+F  L      PNVVTY+ +I G C   ++D+   +   M E A  P+V+T
Sbjct: 320 VGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVT 376

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           ++ +I G   ++   +   +  +M E   +PDA
Sbjct: 377 YNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 409



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 190/342 (55%), Gaps = 12/342 (3%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS--CFTPNAATFNSLI 138
           +H+D  L      P++ +Y  LIN  CK+GRV   F  F +++ +  C  PNA T+N+L+
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGC-RPNAFTYNALV 139

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
            GL  + R+  A A+ T+ +     P+V+TYNTL+  L + G    AL  F +M     E
Sbjct: 140 DGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT----E 195

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
            G V  P  V+++ II GLC+   +  A  +F +M D + +P++VTY+ +I GLC ++  
Sbjct: 196 EGYV--PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQL 253

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA++L   M+ +G +P +V +  ++       ++D A  LL  MV +G  P+  TY  +
Sbjct: 254 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 313

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +D  C +G+++ A E+F  + +  C  + V+Y+ LI GYC+   V+E   + REM     
Sbjct: 314 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---AC 370

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +P VVTYNT+  GL  + + E A  +F EM   G   D RTY
Sbjct: 371 RPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 175/356 (49%), Gaps = 16/356 (4%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCF 106
           FD  L +  + P V S+  L+  L K    D   +       A G  PN +TYN L++  
Sbjct: 83  FDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL 142

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK  R+           +  F P+  T+N+L+  L    R+ EA A FT++   G  P +
Sbjct: 143 CKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTL 202

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +++N +I GLCR      AL +F EM + +        PN VTYS +IDGLCK   +D+A
Sbjct: 203 VSFNAIITGLCRARRLADALEVFNEMIDRDFH------PNLVTYSVVIDGLCKSDQLDEA 256

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + L  +M  E   PD+V Y  L+ G   A   + A  L   M+ QG  P VVT+ V++D+
Sbjct: 257 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 316

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LCK  ++D+A  +   +V     PN  TY+ L+ G+C   + +R +E    M  M C+ +
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC---RASRVDEGGKVMREMACRPN 373

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            V+YN +I G       EEA  ++REM   G  P   TY  L   L  I Q  H L
Sbjct: 374 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQPPHVL 429



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 185/366 (50%), Gaps = 43/366 (11%)

Query: 231 LQMKDEN---INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           LQ+  EN   +    VTYN LI G C+A+D + A  L  EM  +G+Q +  T ++I+  L
Sbjct: 11  LQLFRENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGL 70

Query: 288 CKNRKMDEASRLLDLMVQRG-VRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKH 345
           C+  ++ +A    D  ++    +P+  +Y TL++G C +G+++ A +LF  M  + GC+ 
Sbjct: 71  CRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRP 130

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +  +YN L++G CK   ++ A ++  E   +   P VVTYNTL   LF++ +V+ AL  F
Sbjct: 131 NAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATF 190

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            +M  +G      ++   I GLC+   + +A+E+F  +       ++  Y+ +IDGLCKS
Sbjct: 191 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKS 250

Query: 466 -----------------------------------GRLKFAWELFCSLPHGVLVPNVVTY 490
                                              GRL  A  L   +     +P+VVTY
Sbjct: 251 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 310

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            ++I  LC  G++D A ++F ++  N  +P+V+T+  LI G+ R    S+V+E    M+E
Sbjct: 311 TVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR---ASRVDEGGKVMRE 367

Query: 551 KKVMPD 556
               P+
Sbjct: 368 MACRPN 373



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 2/226 (0%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD- 406
           V+YN+LI G+C   +++ A SL REM  +G++    T + +  GL    +V  AL+ FD 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKS 465
            ++      D  +YTT I+GLCK G +  A +LFR +     C  +   YN L+DGLCK 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            RL  A  +          P+VVTYN ++  L   G++D+A   F  M E    P +++F
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           + +I G  R    +   E+ ++M ++   P+    S+V+D L K++
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD 251


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/412 (33%), Positives = 211/412 (51%), Gaps = 16/412 (3%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T + +I   CK GRV         +++  + P+ AT + LI  L    +I EA      +
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 158 ------KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
                 +A  C     +YN+L+N LC+      A  +F  M +   E  VV  P+ V+YS
Sbjct: 111 NRTISTRASSC----FSYNSLLNSLCKAKKVHQAFAIFSTMVS---ERSVV--PDVVSYS 161

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +IDG CK   + +A+ L+ QM D N  P+V TYN+ ++GL       +A+ ++ EM+  
Sbjct: 162 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISA 221

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P V+T++ ++      RK D+A  L + M+ RG RPNA TYN L+ G C   K + A
Sbjct: 222 GCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEA 281

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            ELF  M   GC  D V+Y  L+ G+C   ++E+A+ ++ EMVSKG  P VV YN L  G
Sbjct: 282 HELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 341

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCEL 450
            F   +   A +LF  M       DT ++   IDGL K   + +AVE+F R  +   C  
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 401

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           D+  YN LI GLC   RL  A ++F  +    L P+   +N++++ +   G 
Sbjct: 402 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 239/443 (53%), Gaps = 11/443 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIA---FGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           N   +   +   CK G++   F A       L S   P++ T +S+I+ L    R+  A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
           +L   +   G  P++ T++ LIN LC+      A    + M          C     +Y+
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSC----FSYN 125

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           ++++ LCK   V +A A+F  M  E ++ PDVV+Y+ LI G C  ++   A++L+ +M+D
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
               P+V T+N  ++ L +  ++ +A  + + M+  G  P+  TY+TL+ GF L  K ++
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ELF +M S GC+ + V+YN L++G CK  + +EA  L+R+MV +G  P  VTY TL  
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   + ++E A+++FDEM   G   D   Y   + G  + G   EA +LF+ +   +C+ 
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLP--HGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           D  ++N +IDGL K+ RL  A E+F  +   HG   P++VTYN +I GLC + ++ +A  
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC-SPDLVTYNSLIFGLCGEQRLSEAMK 424

Query: 509 LFLDMEENAAAPDVITFDMLIHG 531
           +F +++    +PD   F++L+  
Sbjct: 425 VFKEIDRLKLSPDPHAFNVLLEA 447



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 222/396 (56%), Gaps = 10/396 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF--NSLIKGLHAESRIM 148
           G  P++ T+++LIN  CK  ++         + R+  T  ++ F  NSL+  L    ++ 
Sbjct: 79  GYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVH 138

Query: 149 EAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +A A+F T +      P+V++Y+ LI+G C+      A  L+++M + N      C PN 
Sbjct: 139 QAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN------CVPNV 192

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+  ++GL ++G +  A+ ++ +M     +PDV+TY++LIHG   A   ++A  LF  
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+ +G +P+ VT+N ++  LCK  K DEA  L   MV+RG  P+  TY TL+ GFC +GK
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I +A E+F  M S G   D V+YN L+ G+ +  +  EA  L++ MVS+  KP  V++N 
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 388 LFLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +  GL +  +++ A+++F+ M++D G + D  TY + I GLC    + EA+++F+ +  L
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 432

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           K   D  A+N L++ +  +G   F+        H V
Sbjct: 433 KLSPDPHAFNVLLEAMYAAGHKPFSSSSPSPTEHHV 468



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 221/405 (54%), Gaps = 12/405 (2%)

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T +++I  LC+ G    AL+L E M          C P+  T+S +I+ LCK   + +A+
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRG-----YC-PDMATHSMLINELCKADKIQEAQ 104

Query: 228 ALFLQMKDENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVI 283
             FLQ  +  I+       +YNSL++ LC A   ++A  +F  M+ ++ V P VV+++++
Sbjct: 105 E-FLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSIL 163

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D  CK  ++  A +L   M+     PN  TYN  ++G    G+I  A+ ++  M S GC
Sbjct: 164 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGC 223

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             D ++Y+ LI+G+   ++ ++A  L+  M+S+G +P  VTYN L  GL +  + + A +
Sbjct: 224 SPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 283

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           LF +M   G   D  TYTT + G C  G I +AVE+F  +     + D+ AYNCL+ G  
Sbjct: 284 LFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 343

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN-AAAPDV 522
           ++G+   A +LF  +      P+ V++NIMI GL    ++D A ++F  ME++   +PD+
Sbjct: 344 RAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 403

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +T++ LI G       S+  ++  ++   K+ PD    +++++ +
Sbjct: 404 VTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 181/333 (54%), Gaps = 14/333 (4%)

Query: 69  SFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           S+N LL SL K K        + T ++   + P++ +Y+ILI+ FCKI  +      + +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++     PN  T+N+ + GL  + RI +A  ++ ++ + GC P+VITY+TLI+G      
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A  LFE M      I   C+PN VTY+ ++ GLCKE   D+A  LF +M +   +PD
Sbjct: 243 HDQAHELFEAM------ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 296

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VTY +L++G C+     +A  +F EM+ +G  P VV +N ++    +  K  EA +L  
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKN 360
           +MV R  +P+  ++N ++DG     +++ A E+F  ME   GC  D V+YN LI G C  
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           + + EA+ +++E+    + P    +N L   ++
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMY 449



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 192/370 (51%), Gaps = 6/370 (1%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV---TYNSLIHGLCHANDWNEAK 262
           N V ++  + GLCK G +++A      M++   +       T +S+I  LC A   + A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR-GVRPNAC-TYNTLMD 320
            L   M+ +G  P + T +++++ELCK  K+ EA   L  M +    R ++C +YN+L++
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 321 GFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
             C   K+++A  +F +M S      D VSY+ILI+G+CK  E+  A  LY++M+     
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V TYN    GL    ++  A  +++EM   G + D  TY+T I G        +A EL
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  +    C  +   YNCL+ GLCK  +   A ELF  +      P+ VTY  ++ G CN
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++++A ++F +M      PDV+ ++ L+ GF R  +P +  +L   M  ++  PD   
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 560 VSIVVDLLVK 569
            +I++D L K
Sbjct: 370 HNIMIDGLSK 379



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDTR-----LNATGLF 93
           G  NV    +A  +FD M+      P V ++N LL    +  K  + R     + +    
Sbjct: 306 GFCNVGKIEQAVEVFDEMVS-KGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECK 364

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILR--SCFTPNAATFNSLIKGLHAESRIMEAA 151
           P+  ++NI+I+   K  R+      F R+ +   C +P+  T+NSLI GL  E R+ EA 
Sbjct: 365 PDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC-SPDLVTYNSLIFGLCGEQRLSEAM 423

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
            +F ++      P+   +N L+  +   GH
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV---TYNIMIQGLCNDGQM 503
           K  L+  A+   + GLCKSG+++ A+E   ++   +         T + +IQ LC  G++
Sbjct: 6   KAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRV 65

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           D A  L   M +    PD+ T  MLI+   + ++  +  E L  M
Sbjct: 66  DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 250/510 (49%), Gaps = 40/510 (7%)

Query: 92  LFPNLYTYNILINCFCKIGR---VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           L PNL T N LI    +      V L    F  +++     N  TFN LI G   E+++ 
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG---------NGEI 199
           EA  L  K+K F C P+ ++YNT+++ LC+ G    A +L  +M N          N  +
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 200 GVVCK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
              CK                    P+  TY+T+I GLCK+G +D+A  L  +M++  + 
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P VVTYN LI+G    +   +   L  EM  +GV+P+ VT+NV++    K  KMD A   
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L  M + G  P+  T+NTL +G+C  G+++ A  +   M   G K + V+ N +++  C 
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 305

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            +++++A  L      +G     V+Y TL +G F++ +       +DEM+   +     T
Sbjct: 306 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXX----WDEMKEKEIIPSIIT 361

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T I GLC++G   ++++    L       D   YN +I G C+ G++  A+     + 
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                P++ T NI+++GLC +G +DKA  LF        A D +TF+ +I G        
Sbjct: 422 KKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFE 481

Query: 540 KVNELLHKMKEKKVMPDA----SIVSIVVD 565
           +  +LL +M+EKK+ PD     +I+S + D
Sbjct: 482 EAFDLLAEMEEKKLGPDCYTHNAILSALAD 511



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 241/530 (45%), Gaps = 66/530 (12%)

Query: 65  PPVSSFNILLASLAK----NKHYDTRLNA--TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   S+N +L  L K    N+  D  L+    GLFPN  T+NIL++ +CK+G +      
Sbjct: 81  PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEV 140

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + R+   P+  T+ +LI GL  + +I EA  L  +++     P+V+TYN LING   
Sbjct: 141 IDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFE 200

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              ++    L +EM       G   KPN VTY+ ++    KEG +D A     +M++   
Sbjct: 201 CSSSLKGFELIDEME------GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 254

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD VT+N+L +G C A   +EA R+  EM  +G++ + VT N I+  LC  RK+D+A +
Sbjct: 255 SPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 314

Query: 299 LL-------------------------------DLMVQRGVRPNACTYNTLMDGFCLMGK 327
           LL                               D M ++ + P+  TY T++ G C  GK
Sbjct: 315 LLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGK 374

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            +++ +    +   G   D  +YN +I GYC+  +V++A     +MV K  KP + T N 
Sbjct: 375 TDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNI 434

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL     ++ ALKLF      G A D  T+ T I GLC+ G   EA +L   +   K
Sbjct: 435 LVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKK 494

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLV---------------------- 484
              D   +N ++  L  +GR+K A E    +   G L                       
Sbjct: 495 LGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESD 554

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           PN V ++  I  LC  G+   A  +  +  +        T+  L+ G I+
Sbjct: 555 PNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 232/469 (49%), Gaps = 13/469 (2%)

Query: 124 RSCFTPNAATFNSLIKGL---HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R    PN  T N+LIK L    ++  +  + A+F+ +   G E N  T+N LI G C   
Sbjct: 3   RLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIEN 62

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A+ L  +M +        C P+ V+Y+TI+D LCK+G +++A+ L L MK+  + P
Sbjct: 63  KLSEAIGLIGKMKH------FSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFP 116

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  T+N L+ G C      EA  +   M    V P V T+  ++  LCK+ K+DEA RL 
Sbjct: 117 NRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLR 176

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M    + P+  TYN L++G        +  EL   ME  G K + V+YN+++  Y K 
Sbjct: 177 DEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKE 236

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++ A +  R+M   G  P  VT+NTL  G  +  ++  A ++ DEM R G+  ++ T 
Sbjct: 237 GKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 296

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T +  LC    + +A +L  +       +D  +Y  LI G  K G+    W+    +  
Sbjct: 297 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK-SXXWD---EMKE 352

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             ++P+++TY  MI GLC  G+ D++ D   ++ E+   PD  T++ +I G+ R  +  K
Sbjct: 353 KEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDK 412

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
                +KM +K   PD    +I+V  L    +  K+L  F     +G+ 
Sbjct: 413 AFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKA 461



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 218/482 (45%), Gaps = 48/482 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  + D M R +   P V ++  L+  L K+   D        +    L P++ TYN+L
Sbjct: 136 EAAEVIDIMAR-NNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNML 194

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN   +      GF     +      PNA T+N ++K    E ++  A     K++  G 
Sbjct: 195 INGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 254

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ +T+NTL NG C+ G    A  + +EM+          K N+VT +TI+  LC E  
Sbjct: 255 SPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG------LKMNSVTLNTILHTLCGERK 308

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHG---LCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +D A  L           D V+Y +LI G   +  +  W+E       M ++ + PS++T
Sbjct: 309 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE-------MKEKEIIPSIIT 361

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +  ++  LC++ K D++    + +++ G+ P+  TYNT++ G+C  G++++A      M 
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
               K D  + NIL+ G C    +++AL L++  +SKG     VT+NT+  GL E  + E
Sbjct: 422 KKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFE 481

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ------ 453
            A  L  EM+   +  D  T+   +  L   G + EA E    + + + +L  Q      
Sbjct: 482 EAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGI-VEQGKLQDQTISLNK 540

Query: 454 ------------------AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
                             A++  I+ LC  G+ K A  +        ++ +  TY  +++
Sbjct: 541 RKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLME 600

Query: 496 GL 497
           GL
Sbjct: 601 GL 602


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 170/563 (30%), Positives = 264/563 (46%), Gaps = 53/563 (9%)

Query: 12  SFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPP----- 66
           S A A ++A       L  H R + +R   + +  P+ A  + D + R   +  P     
Sbjct: 64  STAHACLAAHLLARDRLYAHSRRVLSRL--VALRRPHLAASLVDLLHRAALALGPRRSAL 121

Query: 67  VSSFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLGFIAFG 120
            S  + LL+ LA     D  + A        + PN  T N ++        + L     G
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHIL--------LRLARDRSG 173

Query: 121 RILRSCF----TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
           R++R  F     PN  TFN +I  L  E  + EA +LF+++K  GC P+V+T+N+LI+G 
Sbjct: 174 RLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGY 233

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
            + G       L EEM          CK + VTY+ +I+  CK G ++ A   F  MK E
Sbjct: 234 GKCGELDEVEQLVEEMRRSG------CKADVVTYNALINCFCKFGRMETAYGYFAAMKRE 287

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
            +  +VVT+++ +   C      EA +LF +M  +G+  +  T+  ++D  CK  ++D+A
Sbjct: 288 GVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDA 347

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             LLD MV++GV  N  TY  L+DG C   K+  AE++   ME  G + +++ Y  LI+G
Sbjct: 348 IVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHG 407

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +  NK  E+AL L  EM +KG++  +  Y  L  GL  +H+++ A  L  +M   G+  +
Sbjct: 408 HFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPN 467

Query: 417 TRTYTTFIDGLCK----------------------NGYIIEAVELFRTLRILKCELDIQA 454
              YTT +D   K                      NG + EAV+LF  +      LD   
Sbjct: 468 YIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVV 527

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y  L+DG  K G L  A+ L   +    L  ++  Y   I G CN   M +AR++F +M 
Sbjct: 528 YTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI 587

Query: 515 ENAAAPDVITFDMLIHGFIRINE 537
            +  APD   ++ LI     I E
Sbjct: 588 GHGIAPDRAVYNCLITQIPEIRE 610



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           ++L+  L      ++A R    + +  V P+  T N I+  L ++R    + RL+  + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDR----SGRLVRRLFE 181

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +   PN  T+N ++D  C  G++  A  LF  M+ MGC  D V++N LI+GY K  E++E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
              L  EM   G K  VVTYN L     +  ++E A   F  M+R+GV A+  T++TF+D
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
             CK G + EA++LF  +R+    L+   Y CLIDG CK+GRL  A  L   +    +  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           NVVTY +++ GLC + ++ +A D+   ME+     + + +  LIHG        K   LL
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 546 HKMKEKKVMPDASIVSIVV 564
            +MK K +  D S+   ++
Sbjct: 422 SEMKNKGLELDISLYGALI 440



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 180/359 (50%), Gaps = 4/359 (1%)

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++  L   G +D A     ++++  + P+  T N ++  L         +RLF    +Q
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF----EQ 182

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
              P+V TFN+++D LCK  ++ EA  L   M + G  P+  T+N+L+DG+   G+++  
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E+L   M   GCK D V+YN LIN +CK   +E A   +  M  +G+   VVT++T    
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +   V  A+KLF +M+  G+A +  TYT  IDG CK G + +A+ L   +      L+
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  L+DGLCK  ++  A ++   +    +  N + Y  +I G   +   +KA  L  
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +M+      D+  +  LI G   +++  +   LL KM E  + P+  I + ++D   K+
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 189/373 (50%), Gaps = 6/373 (1%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PNT T + I+  L +    D++  L  ++ ++   P+V T+N +I  LC   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSL 210

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  M + G  P VVTFN ++D   K  ++DE  +L++ M + G + +  TYN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G++  A   F +M+  G   + V+++  ++ +CK   V EA+ L+ +M  +G+     T
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L  G  +  +++ A+ L DEM R GV  +  TYT  +DGLCK   + EA ++ R + 
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 +   Y  LI G   +   + A  L   + +  L  ++  Y  +IQGLCN  ++D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A+ L   M+E+   P+ I +  ++    +  +  +   +L K+ +    P+   ++  V
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAV 510

Query: 565 DLLVKNEISLKSL 577
            L   NE+  K +
Sbjct: 511 QLF--NEMVHKGM 521



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%)

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L R +  +   P V T+N +   L +  ++  A  LF  M+  G   D  T+ + IDG  
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G + E  +L   +R   C+ D+  YN LI+  CK GR++ A+  F ++    ++ NVV
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           T++  +   C +G + +A  LF  M     A +  T+  LI G  +         LL +M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             + V  +    +++VD L K     ++     + E+ G
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 242/510 (47%), Gaps = 45/510 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N Y+Y ILI   C    V    + F  + R   +PN   F  LI GL    R+ +A
Sbjct: 133 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 192

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF  +   G  P+V+TYN +I G  + G    AL + +E+   NG     C P+  TY
Sbjct: 193 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI-KELMEKNG-----CHPDDWTY 246

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I GLC +   ++A+ L      E   P VVT+ +LI+G C A  +++A R+  +MM 
Sbjct: 247 NTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS 305

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
              +  +  F  +++ L K  ++ EA  LL+ +   G+ PN  TY +++DG+C  GK++ 
Sbjct: 306 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 365

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E+   ME  GC+ +  +YN L+ G  K+K++ +A++L  +M   GI P V+TY TL  
Sbjct: 366 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 425

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  + H  ++A +LF+ M+++G+  D   Y    D LCK G   EA        +    L
Sbjct: 426 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGV---AL 482

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN----------- 499
               Y  LIDG  K+G   FA  L   +      P+  TY++++  LC            
Sbjct: 483 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 542

Query: 500 ------------------------DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
                                   +G+ D A+ ++ +M  +   P   T+ + I+ + + 
Sbjct: 543 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 602

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                  +L+ KM+ + V PD    +I++D
Sbjct: 603 GRLEDAEDLILKMEREGVAPDVVTYNILID 632



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 251/544 (46%), Gaps = 46/544 (8%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L + K     ++A GL PN+ TY  +I+ +CK G+V +       + R    PNA T+NS
Sbjct: 328 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 387

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ GL  + ++ +A AL TK++  G  PNVITY TL+ G C       A  LFE M    
Sbjct: 388 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 447

Query: 197 GE---------IGVVCKP-----------------NTVTYSTIIDGLCKEGFVDKAKALF 230
            +            +CK                    V Y+T+IDG  K G  D A  L 
Sbjct: 448 LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 507

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M DE   PD  TY+ L+H LC     NEA  +  +M  +G++ ++  + +++DE+ + 
Sbjct: 508 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 567

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            K D A R+ + M   G +P+A TY   ++ +C  G++  AE+L   ME  G   D V+Y
Sbjct: 568 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL----------------GLFE 394
           NILI+G      ++ A S  + MV    +P   TY  L                  G++ 
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 687

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL--RILKCELDI 452
           + +++   +L + M + G+     TY++ I G CK G + EA  L   +  + L    DI
Sbjct: 688 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 747

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  LI   C +   + A      +      P + +Y +++ GLCN+G  +K + LF D
Sbjct: 748 --YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCD 805

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           + E     D + + +L  G ++        ++L  M+++     +   ++V + + +   
Sbjct: 806 LLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHEVSS 865

Query: 573 SLKS 576
           SL S
Sbjct: 866 SLVS 869



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 204/417 (48%), Gaps = 7/417 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           ++++L   G  P+ +TYNT+I   C+ G    A   F  +  G  E      P T T + 
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE------PETFTCNA 108

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ G C+ G + KA  LFL M       +  +Y  LI GLC A    +A  LF+ M   G
Sbjct: 109 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 168

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P+V  F  ++  LCK+ ++ +A  L D M Q GV P+  TYN ++ G+  +G++N A 
Sbjct: 169 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 228

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           ++   ME  GC  DD +YN LI G C  K  EEA  L    V +G  PTVVT+  L  G 
Sbjct: 229 KIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 287

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               + + AL++ ++M       D + +   I+ L K   + EA EL   +       ++
Sbjct: 288 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 347

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +IDG CKSG++  A E+   +      PN  TYN ++ GL  D ++ KA  L   
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M+++   P+VIT+  L+ G    ++      L   M++  + PD    +++ D L K
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK 464



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 4/193 (2%)

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A+   R   S  +  +   YN     L      E+  +++ ++ +DG+  DT TY T I
Sbjct: 16  DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--LIDGLCKSGRLKFAWELFCSLPHGV 482
              CK G +  A   FR L  L+  L+ + + C  L+ G C++G L+ A  LF  +P   
Sbjct: 76  KSYCKEGDLTTAHRYFRLL--LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 133

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
              N  +Y I+IQGLC+   + KA  LFL M+ +  +P+V  F  LI G  +        
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193

Query: 543 ELLHKMKEKKVMP 555
            L   M +  V+P
Sbjct: 194 LLFDAMPQNGVVP 206


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 259/545 (47%), Gaps = 65/545 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN+L+++L +  + +       +++  G  PN ++  IL+  +C+ G  S G   
Sbjct: 151 PQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDL 210

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  S   PN   +N++I  L  E + +EA  L  K++  G  P+++T+N  I  LC+
Sbjct: 211 LDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCK 270

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK---- 234
           +G  + A  +F +M   + E+G+  KPNTVTY+ +++G C EG  ++A+A+F  MK    
Sbjct: 271 SGQILEASRIFRDM-QIDEEMGLP-KPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSET 328

Query: 235 ------------------------------DENINPDVVTYNSLIHGLCHANDWNEAKRL 264
                                         ++NI P++ +YN L+HGLC    +++A+ +
Sbjct: 329 LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSI 388

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M + GV P  VT++ ++   C+  K+ EA+ +L  M+Q G  PN  T N L+     
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK----- 379
            G+ + AE+L   M   G   D+V+ N +ING CK   +++A+ +   M ++G       
Sbjct: 449 EGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNL 508

Query: 380 ------------------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
                             P  +TY T+  GL ++ +V+ A K   EM    ++ D+  + 
Sbjct: 509 GNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFD 568

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           TFI   CK G +  A  + + +    C   ++ YN LI GL    ++   + L   +   
Sbjct: 569 TFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKER 628

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            + PNV TYN +I  L   G++  A  L  +M +   +P++ TF +LI  F +  +    
Sbjct: 629 GIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAA 688

Query: 542 NELLH 546
            EL  
Sbjct: 689 QELFE 693



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 254/542 (46%), Gaps = 40/542 (7%)

Query: 59  RMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRV 112
           R    PPP+S +N+L     K    D        +    + P  YT+N+LI+  C++G +
Sbjct: 110 RFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYL 169

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                 F ++      PN  +   L++G            L  ++++ G  PN + YNT+
Sbjct: 170 ENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTV 229

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+ LC  G T+ A  L E+M     E+G+   P+ VT++  I  LCK G + +A  +F  
Sbjct: 230 ISSLCGEGQTVEAEKLVEKMR----EVGL--SPDIVTFNCRIAALCKSGQILEASRIFRD 283

Query: 233 MK-DENI---NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           M+ DE +    P+ VTYN ++ G C    + EA+ +F + M      S+ ++N+ M  L 
Sbjct: 284 MQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLSLRSYNIWMLGLV 342

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           ++ K+ EA  +L+ M ++ ++PN  +YN L+ G C  G  + A  + G M   G   D V
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y+ L++GYC+  ++ EA  + REM+  G  P + T N L   L++  +   A  L   M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL---------------------- 446
              G   D  T  T I+GLCK G + +A+E+   +                         
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 447 -KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            KC  D   Y  +I GLCK GR+  A +    +    L P+ + ++  I   C  G++  
Sbjct: 523 KKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSS 582

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +  +ME+      + T++ LI G    N+  ++  L+ +MKE+ + P+    + ++ 
Sbjct: 583 AFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIIS 642

Query: 566 LL 567
            L
Sbjct: 643 CL 644



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 240/557 (43%), Gaps = 82/557 (14%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF-------------PNLYTYNILINCFCKIGR 111
           P + +FN  +A+L K+      L A+ +F             PN  TYN+++  FC  G 
Sbjct: 256 PDIVTFNCRIAALCKSGQI---LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGM 312

Query: 112 VS------------------------LGFIAFGRILRSCF----------TPNAATFNSL 137
                                     LG +  G++L +             PN  ++N L
Sbjct: 313 FEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNIL 372

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           + GL       +A ++   ++  G  P+ +TY+TL++G CR G  + A  +  EM     
Sbjct: 373 VHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREM----- 427

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
            I V C PN  T + ++  L KEG   +A+ L   M +     D VT N++I+GLC A +
Sbjct: 428 -IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGN 486

Query: 258 WNEAKRL------------------FIEMMD-----QGVQPSVVTFNVIMDELCKNRKMD 294
            ++A  +                  FI++ D     +   P  +T+  I+  LCK  ++D
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA + L  M+ + + P++  ++T +  +C  GK++ A  +   ME  GC     +YN LI
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G     ++ E   L  EM  +GI P V TYN +   L E  +++ A  L DEM + G++
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  T+   I    K      A ELF     L C      Y+ + + L   G    A EL
Sbjct: 667 PNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELLAGGETLKAKEL 725

Query: 475 F-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           F  +L   + + N + Y  +I+ LC DG++D A  +   M +   + D  +F  +I    
Sbjct: 726 FEAALDRSLALKNFL-YRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELG 784

Query: 534 RINEPSKVNELLHKMKE 550
           +       +E   +M E
Sbjct: 785 KRGSKHAADEFAERMME 801



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 206/449 (45%), Gaps = 13/449 (2%)

Query: 136 SLIKGLHAESRIMEAAALFTKLK-AFGCEPNVIT-YNTLINGLCRTGHTMIALNLFEEMA 193
           SL++ L     +  A + F  L+  F  +P  I+ YN L     +       + L+++MA
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     KP T T++ +I  LC+ G+++ A+ +F +M ++   P+  +   L+ G C
Sbjct: 146 VAK------VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A   +    L  EM   G  P+ V +N ++  LC   +  EA +L++ M + G+ P+  
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 314 TYNTLMDGFCLMGKINRAEELFGSM---ESMGC-KHDDVSYNILINGYCKNKEVEEALSL 369
           T+N  +   C  G+I  A  +F  M   E MG  K + V+YN+++ G+C     EEA ++
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  M +     ++ +YN   LGL    ++  A  + +EM    +  +  +Y   + GLCK
Sbjct: 320 FDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCK 378

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G   +A  +   +R      D   Y+ L+ G C+ G++  A  +   +      PN+ T
Sbjct: 379 YGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYT 438

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
            NI++  L  +G+  +A DL   M E     D +T + +I+G  +     K  E++  M 
Sbjct: 439 CNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMW 498

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            +      ++ +  +DL        K LP
Sbjct: 499 TRGSASLGNLGNSFIDLFDIRNNGKKCLP 527



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 40/298 (13%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           +D R N     P+  TY  +I   CK+GRV         ++    +P++  F++ I    
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            + ++  A  +  +++  GC  ++ TYN+LI GL           L +EM     E G+ 
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMK----ERGIF 631

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN--- 259
             PN  TY+ II  L + G +  A  L  +M  + I+P++ T+  LI     A D+    
Sbjct: 632 --PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQ 689

Query: 260 -------------------------------EAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
                                          +AK LF   +D+ +      +  ++++LC
Sbjct: 690 ELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLC 749

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           K+ K+D+AS +L  M+ +    +  ++  ++D     G  + A+E    M  M  + D
Sbjct: 750 KDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 204/388 (52%), Gaps = 9/388 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P    FN+++  L    R     +LF + +  G  P++ T + LIN  C   H  +A ++
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
           F  +            P+ +T +T+I GLC  G + K      Q+  +    D V+Y +L
Sbjct: 116 FANILKRGFH------PDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTL 169

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I+GLC A +     RL  ++    V+P VV +N I++ LCKN+ + +A  +   M+ +G+
Sbjct: 170 INGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 229

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK---NKEVEE 365
            P+  TY TL+ GFC+MGK+  A  L   M+      D  ++++LI+   K    K V+E
Sbjct: 230 SPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDE 289

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+SL+ EM  K + P +VTYN+L  GL + H +E A+ L  EM+  G+  D  +YT  +D
Sbjct: 290 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 349

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLCK G +  A E F+ L +  C L++  YN +I+GLCK+G    A +L   +     +P
Sbjct: 350 GLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMP 409

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           N +T+  +I  L    + DKA  +  +M
Sbjct: 410 NAITFRTIICALSEKDENDKAEKILREM 437



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/410 (33%), Positives = 203/410 (49%), Gaps = 51/410 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           + A   F+ ML M P PPP   FN +L+SL KNK Y T      +    G+ P+L T +I
Sbjct: 40  HHAVASFNLMLLMRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSI 98

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LINCFC    ++L F  F  IL+  F P+A T N+LIKGL     I +      ++ A G
Sbjct: 99  LINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQG 158

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            + + ++Y TLINGLC+ G T     L  ++       G   KP+ V Y+TII+ LCK  
Sbjct: 159 FQLDQVSYGTLINGLCKAGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKNK 212

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW----------------------- 258
            +  A  ++ +M  + I+PDVVTY +LIHG C                            
Sbjct: 213 LLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFS 272

Query: 259 ---------------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
                          +EA  LF EM  + + P +VT+N ++D LCKN  ++ A  LL  M
Sbjct: 273 VLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEM 332

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            + G++P+  +Y  L+DG C  G++  A+E F  +   GC  +   YN++ING CK    
Sbjct: 333 KEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLF 392

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
            EA+ L  +M  KG  P  +T+ T+   L E  + + A K+  EM   G+
Sbjct: 393 GEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 210/439 (47%), Gaps = 14/439 (3%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIM-----EAAALFTKLKAFGCEPNVITYNTL 172
           +F R LR    P           LH +S         A A F  +      P    +N +
Sbjct: 5   SFLRTLRLSLFPPYPPIAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNI 64

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           ++ L +       ++LF++    NG       P+  T S +I+  C +  +  A ++F  
Sbjct: 65  LSSLVKNKRYPTVISLFKQF-EPNG-----ITPDLCTLSILINCFCHQAHITLAFSVFAN 118

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           +     +PD +T N+LI GLC   +  +      +++ QG Q   V++  +++ LCK  +
Sbjct: 119 ILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGE 178

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
               +RLL  +    V+P+   YNT+++  C    +  A +++  M   G   D V+Y  
Sbjct: 179 TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTT 238

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ---VEHALKLFDEMQ 409
           LI+G+C   +++EA SL  EM  K I P V T++ L   L +  +   V+ A+ LF+EM+
Sbjct: 239 LIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMK 298

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
              +  D  TY + IDGLCKN ++  A+ L + ++    + D+ +Y  L+DGLCK GRL+
Sbjct: 299 HKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLE 358

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A E F  L       NV  YN+MI GLC  G   +A DL   ME     P+ ITF  +I
Sbjct: 359 IAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTII 418

Query: 530 HGFIRINEPSKVNELLHKM 548
                 +E  K  ++L +M
Sbjct: 419 CALSEKDENDKAEKILREM 437



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 3/275 (1%)

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            +LM+     P    +N ++       +      LF   E  G   D  + +ILIN +C 
Sbjct: 46  FNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 105

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              +  A S++  ++ +G  P  +T NTL  GL    +++  L   D++   G   D  +
Sbjct: 106 QAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVS 165

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T I+GLCK G       L R L     + D+  YN +I+ LCK+  L  A +++  + 
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P+VVTY  +I G C  G+M +A  L  +M+     PDV TF +LI    +  +  
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285

Query: 540 KVNE---LLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            V+E   L  +MK K ++PD    + ++D L KN 
Sbjct: 286 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNH 320



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 76/177 (42%)

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
           H   HA+  F+ M        T  +   +  L KN      + LF+         D+   
Sbjct: 37  HYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTL 96

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           + LI+  C    +  A+ +F ++      P+ +T N +I+GLC  G++ K       +  
Sbjct: 97  SILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVA 156

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
                D +++  LI+G  +  E   V  LL K++   V PD  + + +++ L KN++
Sbjct: 157 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL 213


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 221/470 (47%), Gaps = 21/470 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL PN+  YN +I   CK    S       +++ S F P+  TFN+LI     E  + EA
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  +      EPN ++Y  LI+G C  G  M+A +L  EM      IG    P+ VT 
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEM------IGRGHTPDVVTL 489

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
             +I GL   G VD+A  +  +M +  + PD   YN LI GLC     + AK L +EM++
Sbjct: 490 GALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLE 549

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           Q VQP    +  ++D   ++ K+ +A ++ + M ++G   +   YN ++ G+C  G +N 
Sbjct: 550 QKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNE 609

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A     SM  +GC  D+ +Y  LI+GY K  +++ AL    +M+ +  KP +VTY +L  
Sbjct: 610 AVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLIC 669

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   I   + A  LF  MQ +G+  +   YT  I  L K    I+A   F  + +  C  
Sbjct: 670 GYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSP 729

Query: 451 DIQAYNCLIDGL--CKSG-------------RLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           +    + L++GL  C+ G             +     ++F  L    L P +  YN +I 
Sbjct: 730 NDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIF 789

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            LC    + KA +L   M      PD +TF  L++GF  + +  K    L
Sbjct: 790 SLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSAL 839



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 215/444 (48%), Gaps = 6/444 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           +++GL  E R+ E   L       GC P  + YN LI+G CR G     L L  EM    
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMK- 340

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
              G++  P  VTY  II  L ++  + K ++L  +MK+  ++P+V  YN++I+ LC   
Sbjct: 341 ---GIM--PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCR 395

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             ++A  +  +M+     P VVTFN ++   C+   ++EA +LL   ++R + PN  +Y 
Sbjct: 396 SASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYT 455

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L+ GFC+ G++  A +L   M   G   D V+   LI+G   + +V+EAL +  +M  +
Sbjct: 456 PLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAER 515

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            + P    YN L  GL +   +  A  L  EM    V  D   YTT IDG  ++  + +A
Sbjct: 516 QVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDA 575

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            ++F  +       DI AYN +I G CKSG +  A     S+     +P+  TY  +I G
Sbjct: 576 RKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDG 635

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               G +  A     DM +    P+++T+  LI G+  I        L   M+ + + P+
Sbjct: 636 YAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPN 695

Query: 557 ASIVSIVVDLLVKNEISLKSLPSF 580
               ++++  L K + ++++   F
Sbjct: 696 VVHYTVLIGSLFKKDKAIQAAAYF 719



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 211/442 (47%), Gaps = 6/442 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P    YN+LI+ +C+ G V  G +  G +      P   T+ ++I  L  +S + + 
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKI 365

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
            +L  ++K  G  PNV  YNT+I  LC+      AL +  +M      +     P+ VT+
Sbjct: 366 ESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQM------VASRFDPDVVTF 419

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T+I   C+EG V++A  L  +     + P+ ++Y  LIHG C   +   A  L +EM+ 
Sbjct: 420 NTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIG 479

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P VVT   ++  L  + ++DEA  + + M +R V P+A  YN L+ G C    ++ 
Sbjct: 480 RGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSA 539

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+ L   M     + D   Y  LI+G+ ++ ++ +A  ++  M  KG    +V YN +  
Sbjct: 540 AKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIK 599

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +   +  A+     M++ G   D  TYTT IDG  K G I  A+     +   +C+ 
Sbjct: 600 GYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKP 659

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +I  Y  LI G C  G    A  LF S+    L PNVV Y ++I  L    +  +A   F
Sbjct: 660 NIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYF 719

Query: 511 LDMEENAAAPDVITFDMLIHGF 532
             M  N  +P+  T   L++G 
Sbjct: 720 EHMLLNHCSPNDATMHYLVNGL 741



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 164/350 (46%), Gaps = 2/350 (0%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN--VIMDELCKNRKMDEAS 297
           PD    N L+  L     W  A+RL+ EM+ +  +     ++  V++  LC   +++E  
Sbjct: 237 PDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGR 296

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           RL++     G  P A  YN L+DG+C  G + R   L G ME  G     V+Y  +I+  
Sbjct: 297 RLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWL 356

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            +  ++ +  SL  EM  +G+ P V  YNT+   L +      AL + ++M       D 
Sbjct: 357 GRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDV 416

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            T+ T I   C+ G + EA++L R     + E +  +Y  LI G C  G +  A +L   
Sbjct: 417 VTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVE 476

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      P+VVT   +I GL   GQ+D+A  +   M E    PD   +++LI G  +   
Sbjct: 477 MIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRM 536

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            S    LL +M E+KV PD  + + ++D  ++++    +   F   E +G
Sbjct: 537 LSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKG 586



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 21/211 (9%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           + +   G  P+ +TY  LI+ + K G +         +++    PN  T+ SLI G    
Sbjct: 615 SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNI 674

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
                A  LF  +++ G  PNV+ Y  LI  L +    + A   FE M   +      C 
Sbjct: 675 GNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNH------CS 728

Query: 205 PNTVTYSTIIDGL--CKEGFVD----------KAKAL---FLQMKDENINPDVVTYNSLI 249
           PN  T   +++GL  C+ G ++          K  AL   F  +  + ++P +  YN++I
Sbjct: 729 PNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAII 788

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             LC  N   +A  L  +M ++G  P  VTF
Sbjct: 789 FSLCRHNMLGKAMELKEKMSNKGCLPDPVTF 819


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/451 (31%), Positives = 231/451 (51%), Gaps = 14/451 (3%)

Query: 69  SFNILLASLAK-----NKHYDTRLNAT-GLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +F+IL+  L K       H   +   T G   +++TY  +++   K  ++        +I
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
             +  TP  AT+N+L+ GL    R+ EA  L  K+   GC P+V+TY +LI+GL +   +
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  LF+EMA+    +  VC      Y+ +I GL + G + +A +++  M  +   PDV
Sbjct: 121 FEAYKLFKEMASRGLALDTVC------YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VT +++I GLC A     A R+F  M  +G+ P+ V ++ ++  LCK RKMD A  +L  
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +    P+  TYN L+DG C  G +  A   F  M   GCK D  +YNILI+G+CK   
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            + A  ++ +M S    P VVTY TL  GL +  Q+  A   +  M+  G   D+  Y++
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSS 354

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            +DGLCK+G +     LF  +       + Q    LI  LCK+ R+  A  LF ++    
Sbjct: 355 LVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 413

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           + P+   YN +I  L   G++++ + ++ +M
Sbjct: 414 M-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 204/405 (50%), Gaps = 6/405 (1%)

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           T++ LINGL + G  + A +L +E    NG     C  +  TY+TI+D L K   + +A 
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTT-NG-----CTIDIHTYTTIVDWLAKNKKIQEAV 54

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           AL  ++      P + TYN+L++GLC      EA  L  +++D G  P VVT+  ++D L
Sbjct: 55  ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 114

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K ++  EA +L   M  RG+  +   Y  L+ G    GKI +A  ++ +M S GC  D 
Sbjct: 115 GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V+ + +I+G CK   +  A+ +++ M ++G+ P  V Y+ L  GL +  +++ AL++  +
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M++     DT TY   IDGLCK+G +  A   F  +    C+ D+  YN LI G CK+G 
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
              A  +F  +      PNVVTY  +I GLC   Q+ KA   +  M+E    PD   +  
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSS 354

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           L+ G  +  +      L  +M+   V    +   ++  L   N +
Sbjct: 355 LVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRV 399


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 252/487 (51%), Gaps = 4/487 (0%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           T+L   G +  ++ +N  ++   K+  V+  +  +  ++   +  N  TFN +I  L  E
Sbjct: 117 TKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKE 176

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            R++EA ++  +    G  PNV+T+N +I+G  + G   +AL L  +M   +G      K
Sbjct: 177 GRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSG---CSVK 233

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P++VTY++ ++G CK G +  A+    +M  + I P+V TY +L+ G         A RL
Sbjct: 234 PDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRL 293

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             E++++G+ P+ V +N I+  L     M+ AS LL  M+ + + P+  TY+ +++G C 
Sbjct: 294 CDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCR 353

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G +N A +    +  M    D  S+N++IN  C++  +  A  L   M  +G+ P VVT
Sbjct: 354 NGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVT 413

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           + TL     +  +VE+A++++++M + G   +   Y + I+G  K G    A+ L  TLR
Sbjct: 414 FGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLR 473

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +    D+  YN LI G C  G++  A+ LF  + +  ++ + VTYN +I  LC  G + 
Sbjct: 474 RMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVL 532

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A++L   M      PD +T+ +LI  F +   P +V EL   M  K V+PD      +V
Sbjct: 533 QAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMV 592

Query: 565 DLLVKNE 571
             L++ E
Sbjct: 593 IPLLQEE 599



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 209/418 (50%), Gaps = 18/418 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDTRL---------NATGLFPNLYTYNILINCFCKIGRVSLG 115
           P V +FN+++    K    D  L         +   + P+  TYN  +N FCKIG +++ 
Sbjct: 196 PNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVA 255

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                 +L     PN  T+ +L+ G      +  A  L  +L   G  PN + YN++I+ 
Sbjct: 256 EEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHW 315

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L   G    A  L  +M +          P+  TYS +I+GLC+ G++++A   FLQM  
Sbjct: 316 LSMEGDMEGASLLLSDMIDKR------IYPDQFTYSIVIEGLCRNGYLNEAFK-FLQMIL 368

Query: 236 E-NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           E ++  D  ++N +I+ LC +N+   AK+L   M  +G+ P VVTF  ++D  CK+ K++
Sbjct: 369 EMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVE 428

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A ++ + M++ G +PN   YN++++GF   G  + A  L  ++  MG   D V+YN LI
Sbjct: 429 NAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLI 487

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +GYC   ++++A +L+ EM + GI  + VTYNTL   L +   V  A +L   M   G+ 
Sbjct: 488 HGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLI 547

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
            D  TYT  I    K     E +EL   + +     D Q Y  ++  L +   ++F +
Sbjct: 548 PDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVEFDY 605



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 183/371 (49%), Gaps = 38/371 (10%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +CK +   +  ++    + G  + A  +  +++ +     V  +N+ +  L   ND N  
Sbjct: 88  ICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRF 147

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            +++ EM+  G   +V TFN+I+  L K  ++ EA  ++   ++ G+ PN  T+N ++DG
Sbjct: 148 WKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDG 207

Query: 322 FCLMGKINRAEELFGSMESM-GC--KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
              MG ++ A +L   ME M GC  K D V+YN  +NG+CK   +  A    +EM+ K I
Sbjct: 208 AIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEI 267

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-------------------------- 412
           +P V TY TL  G   +  +E+A +L DE+   G                          
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASL 327

Query: 413 ---------VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
                    +  D  TY+  I+GLC+NGY+ EA +  + +  +    D  ++N +I+ LC
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLC 387

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +S  L  A +L  ++    LVP+VVT+  +I   C DG+++ A  ++  M +    P+++
Sbjct: 388 RSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLL 447

Query: 524 TFDMLIHGFIR 534
            ++ +I+GF +
Sbjct: 448 IYNSVINGFAK 458


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 259/545 (47%), Gaps = 65/545 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN+L+++L +  + +       +++  G  PN ++  IL+  +C+ G  S G   
Sbjct: 151 PQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDL 210

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  S   PN   +N++I  L  E + +EA  L  K++  G  P+++T+N  I  LC+
Sbjct: 211 LDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCK 270

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK---- 234
           +G  + A  +F +M   + E+G+  KPNTVTY+ +++G C EG  ++A+A+F  MK    
Sbjct: 271 SGQILEASRIFRDM-QIDEEMGLP-KPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSET 328

Query: 235 ------------------------------DENINPDVVTYNSLIHGLCHANDWNEAKRL 264
                                         ++NI P++ +YN L+HGLC    +++A+ +
Sbjct: 329 LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSI 388

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M + GV P  VT++ ++   C+  K+ EA+ +L  M+Q G  PN  T N L+     
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK----- 379
            G+ + AE+L   M   G   D+V+ N +ING CK   +++A+ +   M ++G       
Sbjct: 449 EGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNL 508

Query: 380 ------------------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
                             P  +TY T+  GL ++ +V+ A K   EM    ++ D+  + 
Sbjct: 509 GNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFD 568

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           TFI   CK G +  A  + + +    C   ++ YN LI GL    ++   + L   +   
Sbjct: 569 TFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKER 628

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            + PNV TYN +I  L   G++  A  L  +M +   +P++ TF +LI  F +  +    
Sbjct: 629 GIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAA 688

Query: 542 NELLH 546
            EL  
Sbjct: 689 QELFE 693



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 254/542 (46%), Gaps = 40/542 (7%)

Query: 59  RMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRV 112
           R    PPP+S +N+L     K    D        +    + P  YT+N+LI+  C++G +
Sbjct: 110 RFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYL 169

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                 F ++      PN  +   L++G            L  ++++ G  PN + YNT+
Sbjct: 170 ENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTV 229

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I+ LC  G T+ A  L E+M     E+G+   P+ VT++  I  LCK G + +A  +F  
Sbjct: 230 ISSLCGEGQTVEAEKLVEKMR----EVGL--SPDIVTFNCRIAALCKSGQILEASRIFRD 283

Query: 233 MK-DENI---NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           M+ DE +    P+ VTYN ++ G C    + EA+ +F + M      S+ ++N+ M  L 
Sbjct: 284 MQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF-DSMKNSETLSLRSYNIWMLGLV 342

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           ++ K+ EA  +L+ M ++ ++PN  +YN L+ G C  G  + A  + G M   G   D V
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y+ L++GYC+  ++ EA  + REM+  G  P + T N L   L++  +   A  L   M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL---------------------- 446
              G   D  T  T I+GLCK G + +A+E+   +                         
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 447 -KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            KC  D   Y  +I GLCK GR+  A +    +    L P+ + ++  I   C  G++  
Sbjct: 523 KKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSS 582

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +  +ME+      + T++ LI G    N+  ++  L+ +MKE+ + P+    + ++ 
Sbjct: 583 AFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIIS 642

Query: 566 LL 567
            L
Sbjct: 643 CL 644



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 240/557 (43%), Gaps = 82/557 (14%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF-------------PNLYTYNILINCFCKIGR 111
           P + +FN  +A+L K+      L A+ +F             PN  TYN+++  FC  G 
Sbjct: 256 PDIVTFNCRIAALCKSGQI---LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGM 312

Query: 112 VS------------------------LGFIAFGRILRSCF----------TPNAATFNSL 137
                                     LG +  G++L +             PN  ++N L
Sbjct: 313 FEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNIL 372

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           + GL       +A ++   ++  G  P+ +TY+TL++G CR G  + A  +  EM     
Sbjct: 373 VHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREM----- 427

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
            I V C PN  T + ++  L KEG   +A+ L   M +     D VT N++I+GLC A +
Sbjct: 428 -IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGN 486

Query: 258 WNEAKRL------------------FIEMMD-----QGVQPSVVTFNVIMDELCKNRKMD 294
            ++A  +                  FI++ D     +   P  +T+  I+  LCK  ++D
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA + L  M+ + + P++  ++T +  +C  GK++ A  +   ME  GC     +YN LI
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G     ++ E   L  EM  +GI P V TYN +   L E  +++ A  L DEM + G++
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  T+   I    K      A ELF     L C      Y+ + + L   G    A EL
Sbjct: 667 PNIYTFRILIGAFFKACDFGAAQELFEIALSL-CGHKESLYSFMFNELLAGGETLKAKEL 725

Query: 475 F-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           F  +L   + + N + Y  +I+ LC DG++D A  +   M +   + D  +F  +I    
Sbjct: 726 FEAALDRSLALKNFL-YRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELG 784

Query: 534 RINEPSKVNELLHKMKE 550
           +       +E   +M E
Sbjct: 785 KRGSKHAADEFAERMME 801



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 206/449 (45%), Gaps = 13/449 (2%)

Query: 136 SLIKGLHAESRIMEAAALFTKLK-AFGCEPNVIT-YNTLINGLCRTGHTMIALNLFEEMA 193
           SL++ L     +  A + F  L+  F  +P  I+ YN L     +       + L+++MA
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                     KP T T++ +I  LC+ G+++ A+ +F +M ++   P+  +   L+ G C
Sbjct: 146 VAR------VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A   +    L  EM   G  P+ V +N ++  LC   +  EA +L++ M + G+ P+  
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 314 TYNTLMDGFCLMGKINRAEELFGSM---ESMGC-KHDDVSYNILINGYCKNKEVEEALSL 369
           T+N  +   C  G+I  A  +F  M   E MG  K + V+YN+++ G+C     EEA ++
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  M +     ++ +YN   LGL    ++  A  + +EM    +  +  +Y   + GLCK
Sbjct: 320 FDSMKNSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCK 378

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G   +A  +   +R      D   Y+ L+ G C+ G++  A  +   +      PN+ T
Sbjct: 379 YGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYT 438

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
            NI++  L  +G+  +A DL   M E     D +T + +I+G  +     K  E++  M 
Sbjct: 439 CNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMW 498

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLP 578
            +      ++ +  +DL        K LP
Sbjct: 499 TRGSASLGNLGNSFIDLFDIRNNGKKCLP 527



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 40/298 (13%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           +D R N     P+  TY  +I   CK+GRV         ++    +P++  F++ I    
Sbjct: 516 FDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYC 575

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
            + ++  A  +  +++  GC  ++ TYN+LI GL           L +EM     E G+ 
Sbjct: 576 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMK----ERGIF 631

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN--- 259
             PN  TY+ II  L + G +  A  L  +M  + I+P++ T+  LI     A D+    
Sbjct: 632 --PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQ 689

Query: 260 -------------------------------EAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
                                          +AK LF   +D+ +      +  ++++LC
Sbjct: 690 ELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLC 749

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           K+ K+D+AS +L  M+ +    +  ++  ++D     G  + A+E    M  M  + D
Sbjct: 750 KDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 248/487 (50%), Gaps = 24/487 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTY 99
           P+EA  +F  +  +    P + + N +L  L K  H   R+          G+ P++ TY
Sbjct: 122 PDEALSVFGRLREL----PALPACNAILDGLVK-AHMLARVWELFDEMLGRGMVPSVVTY 176

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N LIN     G V+  +  + +++     PN  T+ ++I  L  E  I +A  LF ++K 
Sbjct: 177 NTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKE 236

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  PN+ TYN L++   +  +   AL  + ++     + G+V  PN V ++T+IDGLC+
Sbjct: 237 AGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDGLCQ 290

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              + +AK +FL M    + P V  YNSLIHG   +    EA   F E++ +G++P   T
Sbjct: 291 ANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFT 350

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
            ++++  LC   +M  A+R L++M Q G+  NA  YN L+D +C  G ++ A      M 
Sbjct: 351 CSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMS 410

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            +G + + V+Y+ LI+G+ KN E+E A+++Y EMV+KG++P VVTY  L  G  +   ++
Sbjct: 411 EVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMD 470

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE------LDIQ 453
            A  L  EM+  G+ ++  T +  +DGLC+   + +AV         K         +  
Sbjct: 471 AAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  LI GL   G+   A   F  +    +VP+  TY ++I+GLC  G +  A  L+ DM
Sbjct: 531 TYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADM 590

Query: 514 EENAAAP 520
            +    P
Sbjct: 591 VKVGVKP 597



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 215/416 (51%), Gaps = 10/416 (2%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA ++F +L+     P +   N +++GL +         LF+EM  G G +     P+ V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEML-GRGMV-----PSVV 174

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T+I+    +G V KA  ++ QM    I+P+VVTY ++I  LC  +   +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEM 234

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            + G++P++ T+N +M    K   +  A      +++ G+ PN   + TL+DG C   +I
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRI 294

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ +F  M           YN LI+G  ++   +EAL+ ++E++ KG++P   T + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIV 354

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +  Q++ A +  + MQ+ G+A +   Y   ID  CK+G + EA+     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           E ++  Y+ LIDG  K+G ++ A  ++  +    + PNVVTY  +I G   +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINE-PSKVNELLHKMKEKKVMPDASIVSIV 563
           L  +MEE     + IT  +L+ G  R N     V  ++    +KK   + SI + V
Sbjct: 475 LQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 182/365 (49%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P     + I+DGL K   + +   LF +M    + P VVTYN+LI+   H  D  +A  +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           + +M+ + + P+VVT+  ++  LC+   + +A  L   M + G+RPN  TYN LM     
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
              I  A   +  +   G   +DV +  LI+G C+   + EA +++ +M    + PTV  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN+L  G F     + AL  F E+ R G+  D  T +  + GLC  G +  A      ++
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                L+  AYN LID  CKSG L  A      +    + PNVVTY+ +I G   +G+M+
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  ++ +M      P+V+T+  LIHG  +  +      L  +M+EK +  +A  VS++V
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495

Query: 565 DLLVK 569
           D L +
Sbjct: 496 DGLCR 500



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 168/364 (46%), Gaps = 53/364 (14%)

Query: 65  PPVSSFNILLASLAKN---KH-----YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           P + ++N L++S  K    KH     YD  L   GL PN   +  LI+  C+  R++   
Sbjct: 241 PNLYTYNALMSSHFKRDNIKHALVFYYD--LLKCGLVPNDVIFTTLIDGLCQANRITEAK 298

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  + R    P    +NSLI G        EA A F ++   G  P+  T + ++ GL
Sbjct: 299 NIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGL 358

Query: 177 CRTGHTMIALNLFEEMA--------------------NGN-----------GEIGVVCKP 205
           C  G   +A    E M                     +GN            E+GV  +P
Sbjct: 359 CDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV--EP 416

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N VTYS++IDG  K G ++ A A++ +M  + + P+VVTY +LIHG     D + A  L 
Sbjct: 417 NVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQ 476

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR--------PNACTYNT 317
            EM ++G+  + +T +V++D LC+  ++ +A R +  M   G +         N+ TY T
Sbjct: 477 KEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI--MEYSGQKKSEKNPSIANSVTYMT 534

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+ G  + G+ N A   F  M   G   D  +Y ++I G C    V  A+ LY +MV  G
Sbjct: 535 LIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 594

Query: 378 IKPT 381
           +KPT
Sbjct: 595 VKPT 598



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 145/296 (48%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P++   N I+D L K   +     L D M+ RG+ P+  TYNTL++     G + +A E+
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           +  M +     + V+Y  +I   C+   + +A  L+ EM   G++P + TYN L    F+
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              ++HAL  + ++ + G+  +   +TT IDGLC+   I EA  +F  +   +    +  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN LI G  +SG  + A   F  +    L P+  T +I+++GLC+ GQM  A      M+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           ++  A +   +++LI  + +     +      +M E  V P+    S ++D   KN
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKN 431



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 121/235 (51%), Gaps = 14/235 (5%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +  +G+  N   YN+LI+ +CK G +    +   R+      PN  T++SLI G H+++ 
Sbjct: 374 MQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDG-HSKNG 432

Query: 147 IME-AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            ME A A++T++ A G EPNV+TY  LI+G  + G    A  L +EM     E G+    
Sbjct: 433 EMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEME----EKGIYS-- 486

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQ---MKDENINPDV---VTYNSLIHGLCHANDWN 259
           N +T S ++DGLC+E  V  A    ++    K    NP +   VTY +LI+GL     +N
Sbjct: 487 NAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYN 546

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           EA   F  M D G+ P   T+ +++  LC    +  A  L   MV+ GV+P  C 
Sbjct: 547 EACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 44/239 (18%)

Query: 364 EEALSLY---REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +EALS++   RE+      P +   N +  GL + H +    +LFDEM   G+     TY
Sbjct: 123 DEALSVFGRLREL------PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTY 176

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I+     G + +A E++  +   + + ++  Y  +I  LC+   +  A  LF  +  
Sbjct: 177 NTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKE 236

Query: 481 GVLVPNVVTYN-----------------------------------IMIQGLCNDGQMDK 505
             + PN+ TYN                                    +I GLC   ++ +
Sbjct: 237 AGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITE 296

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           A+++FLDM     AP V  ++ LIHG  R     +      ++  K + PD    SIVV
Sbjct: 297 AKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVV 355


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 234/442 (52%), Gaps = 15/442 (3%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGC-----EPNVITYNTLINGLCRTGHTMIALN 187
           +FNS++  +  E     A   +  L  FG      +PN++TYN +I  LC+ G    A++
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFY--LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 219

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
            F EM   N      C P+  TYST+++GLCKE  VD+A  L  +M+ E   P+ VT+N 
Sbjct: 220 TFREMPLKN------CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 273

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI  L    D + A +L   M  +G  P+ VT+N ++  LC   K+D+A  LL+ MV   
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 333

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             PN  TY T+++G     +      +  SME  G K ++  Y+ LI+G  K  + E A+
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L++EM  KG KP VV Y     GL    + + A  +  EM   G   +  TY++ + G 
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K G   +A+ +++ +       ++   + L++GLC+SGRL+ A  ++  +    L P+V
Sbjct: 454 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 513

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDM--EENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           V Y+ MI+GLC+ G +DK   LF +M  +E  + PDV+T+++L +   R +  ++  +LL
Sbjct: 514 VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 573

Query: 546 HKMKEKKVMPDASIVSIVVDLL 567
           + M ++   PD+   +I ++ L
Sbjct: 574 NSMLDEGCDPDSLTCNIFLETL 595



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 226/463 (48%), Gaps = 54/463 (11%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL---------NATGLFPNLY 97
           P EA   F  M         V SFN +L  + +   +             N+ G  PNL 
Sbjct: 140 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLL 199

Query: 98  TYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           TYN++I   CK+G++      F  + L++C  P+  T+++L+ GL  E R+ EA  L  +
Sbjct: 200 TYNLIIKALCKLGQIDRAVDTFREMPLKNC-NPDVFTYSTLMNGLCKERRVDEAVFLLDE 258

Query: 157 LKA-----------------------------------FGCEPNVITYNTLINGLCRTGH 181
           ++A                                    GC PN +TYNTLI+GLC  G 
Sbjct: 259 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 318

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL+L E+M +        C PN VTY TII+GL K+   +    + + M++     +
Sbjct: 319 LDKALSLLEKMVSSK------CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              Y+SLI GL        A RL+ EM ++G +P+VV +   +D LC++ K DEA  +L 
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M+ +G  PNA TY++LM GF   G   +A  ++  M S   +H+ V  ++L+NG C++ 
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRT 419
            + EAL+++  M+ +G+KP VV Y+++  GL ++  V+  LKLF EM  Q      D  T
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           Y    + LC+   +  A++L  ++    C+ D    N  ++ L
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 169/332 (50%), Gaps = 3/332 (0%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMM---DQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           V ++NS+++ +    D++ A + ++ +     +G QP+++T+N+I+  LCK  ++D A  
Sbjct: 160 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 219

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M  +   P+  TY+TLM+G C   +++ A  L   M++ GC  + V++N+LI+   
Sbjct: 220 TFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALS 279

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           KN ++  A  L   M  KG  P  VTYNTL  GL    +++ AL L ++M       +  
Sbjct: 280 KNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQV 339

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I+GL K     + V +  ++     + +   Y+ LI GL K G+ + A  L+  +
Sbjct: 340 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 399

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PNVV Y   I GLC D + D+A D+  +M      P+  T+  L+ GF +  + 
Sbjct: 400 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 459

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            K   +  +M  + +  +    S++++ L ++
Sbjct: 460 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 491



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 135/272 (49%)

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +G +PN  TYN ++   C +G+I+RA + F  M    C  D  +Y+ L+NG CK + V+E
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+ L  EM ++G  P  VT+N L   L +   +  A KL D M   G   +  TY T I 
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC  G + +A+ L   +   KC  +   Y  +I+GL K  R +    +  S+       
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           N   Y+ +I GL  +G+ + A  L+ +M E    P+V+ +   I G  R  +P +  ++L
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 431

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            +M  K  +P+A   S ++    K   S K++
Sbjct: 432 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +FG+  S G + + ++YN++I   CK  +++ A+  +REM  K   P V TY+TL  GL 
Sbjct: 186 VFGA-NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLC 244

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  +V+ A+ L DEMQ +G   +  T+   ID L KNG +  A +L   + +  C  +  
Sbjct: 245 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 304

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN LI GLC  G+L  A  L   +     VPN VTY  +I GL    + +    + + M
Sbjct: 305 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 364

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           EE     +   +  LI G  +  +      L  +M EK   P+  +    +D L ++E
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 422



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 5/242 (2%)

Query: 352 ILINGYCKNKEVE-EALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM- 408
           ILI   C    +  EA++ +  M +    K TV ++N++   + +     +A K +  + 
Sbjct: 128 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 187

Query: 409 --QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
                G   +  TY   I  LCK G I  AV+ FR + +  C  D+  Y+ L++GLCK  
Sbjct: 188 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 247

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           R+  A  L   +     +PN VT+N++I  L  +G + +A  L  +M      P+ +T++
Sbjct: 248 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 307

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
            LIHG     +  K   LL KM   K +P+      +++ LVK   +   +   +  E +
Sbjct: 308 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER 367

Query: 587 GE 588
           G+
Sbjct: 368 GQ 369



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G  PN +TY+ L+  F K G      + +  ++      N    + L+ GL    R+ 
Sbjct: 436 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 495

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  ++T +   G +P+V+ Y+++I GLC  G     L LF EM     +     +P+ V
Sbjct: 496 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK----SRPDVV 551

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI-- 266
           TY+ + + LC++  + +A  L   M DE  +PD +T N  +  L    +  +  RLF+  
Sbjct: 552 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE 611

Query: 267 -------------------EMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
                              EM+ + + P   T++ ++   CK +++ E 
Sbjct: 612 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 234/442 (52%), Gaps = 15/442 (3%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGC-----EPNVITYNTLINGLCRTGHTMIALN 187
           +FNS++  +  E     A   +  L  FG      +PN++TYN +I  LC+ G    A++
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFY--LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 195

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
            F EM   N      C P+  TYST+++GLCKE  VD+A  L  +M+ E   P+ VT+N 
Sbjct: 196 TFREMPLKN------CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 249

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI  L    D + A +L   M  +G  P+ VT+N ++  LC   K+D+A  LL+ MV   
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 309

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             PN  TY T+++G     +      +  SME  G K ++  Y+ LI+G  K  + E A+
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L++EM  KG KP VV Y     GL    + + A  +  EM   G   +  TY++ + G 
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K G   +A+ +++ +       ++   + L++GLC+SGRL+ A  ++  +    L P+V
Sbjct: 430 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 489

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDM--EENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           V Y+ MI+GLC+ G +DK   LF +M  +E  + PDV+T+++L +   R +  ++  +LL
Sbjct: 490 VAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 549

Query: 546 HKMKEKKVMPDASIVSIVVDLL 567
           + M ++   PD+   +I ++ L
Sbjct: 550 NSMLDEGCDPDSLTCNIFLETL 571



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 226/463 (48%), Gaps = 54/463 (11%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL---------NATGLFPNLY 97
           P EA   F  M         V SFN +L  + +   +             N+ G  PNL 
Sbjct: 116 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLL 175

Query: 98  TYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           TYN++I   CK+G++      F  + L++C  P+  T+++L+ GL  E R+ EA  L  +
Sbjct: 176 TYNLIIKALCKLGQIDRAVDTFREMPLKNC-NPDVFTYSTLMNGLCKERRVDEAVFLLDE 234

Query: 157 LKA-----------------------------------FGCEPNVITYNTLINGLCRTGH 181
           ++A                                    GC PN +TYNTLI+GLC  G 
Sbjct: 235 MQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 294

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL+L E+M +        C PN VTY TII+GL K+   +    + + M++     +
Sbjct: 295 LDKALSLLEKMVSSK------CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              Y+SLI GL        A RL+ EM ++G +P+VV +   +D LC++ K DEA  +L 
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M+ +G  PNA TY++LM GF   G   +A  ++  M S   +H+ V  ++L+NG C++ 
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRT 419
            + EAL+++  M+ +G+KP VV Y+++  GL ++  V+  LKLF EM  Q      D  T
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           Y    + LC+   +  A++L  ++    C+ D    N  ++ L
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 169/332 (50%), Gaps = 3/332 (0%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMM---DQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           V ++NS+++ +    D++ A + ++ +     +G QP+++T+N+I+  LCK  ++D A  
Sbjct: 136 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 195

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M  +   P+  TY+TLM+G C   +++ A  L   M++ GC  + V++N+LI+   
Sbjct: 196 TFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALS 255

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           KN ++  A  L   M  KG  P  VTYNTL  GL    +++ AL L ++M       +  
Sbjct: 256 KNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQV 315

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T I+GL K     + V +  ++     + +   Y+ LI GL K G+ + A  L+  +
Sbjct: 316 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 375

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 PNVV Y   I GLC D + D+A D+  +M      P+  T+  L+ GF +  + 
Sbjct: 376 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 435

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            K   +  +M  + +  +    S++++ L ++
Sbjct: 436 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 467



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 135/272 (49%)

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +G +PN  TYN ++   C +G+I+RA + F  M    C  D  +Y+ L+NG CK + V+E
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A+ L  EM ++G  P  VT+N L   L +   +  A KL D M   G   +  TY T I 
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC  G + +A+ L   +   KC  +   Y  +I+GL K  R +    +  S+       
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           N   Y+ +I GL  +G+ + A  L+ +M E    P+V+ +   I G  R  +P +  ++L
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 407

Query: 546 HKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            +M  K  +P+A   S ++    K   S K++
Sbjct: 408 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 1/238 (0%)

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +FG+  S G + + ++YN++I   CK  +++ A+  +REM  K   P V TY+TL  GL 
Sbjct: 162 VFGA-NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLC 220

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  +V+ A+ L DEMQ +G   +  T+   ID L KNG +  A +L   + +  C  +  
Sbjct: 221 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 280

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN LI GLC  G+L  A  L   +     VPN VTY  +I GL    + +    + + M
Sbjct: 281 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 340

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           EE     +   +  LI G  +  +      L  +M EK   P+  +    +D L ++E
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 398



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 5/242 (2%)

Query: 352 ILINGYCKNKEVE-EALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM- 408
           ILI   C    +  EA++ +  M +    K TV ++N++   + +     +A K +  + 
Sbjct: 104 ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 163

Query: 409 --QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
                G   +  TY   I  LCK G I  AV+ FR + +  C  D+  Y+ L++GLCK  
Sbjct: 164 GANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKER 223

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           R+  A  L   +     +PN VT+N++I  L  +G + +A  L  +M      P+ +T++
Sbjct: 224 RVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYN 283

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
            LIHG     +  K   LL KM   K +P+      +++ LVK   +   +   +  E +
Sbjct: 284 TLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER 343

Query: 587 GE 588
           G+
Sbjct: 344 GQ 345



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G  PN +TY+ L+  F K G      + +  ++      N    + L+ GL    R+ 
Sbjct: 412 SKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLR 471

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  ++T +   G +P+V+ Y+++I GLC  G     L LF EM     +     +P+ V
Sbjct: 472 EALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPK----SRPDVV 527

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI-- 266
           TY+ + + LC++  + +A  L   M DE  +PD +T N  +  L    +  +  RLF+  
Sbjct: 528 TYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE 587

Query: 267 -------------------EMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
                              EM+ + + P   T++ ++   CK +++ E 
Sbjct: 588 LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 251/515 (48%), Gaps = 8/515 (1%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFP--NLYTYNILINCFCKIGRVSLGFIAFGRI 122
           PP+   N LL +LA+++ +    +     P  NL TY  LIN +C  G +         +
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSL 98

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L +   P++  + S + G      +  A  +F  +   GC     TY  L++GL   G  
Sbjct: 99  LHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMV 158

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A+ +F  M   +      C P+T  Y+T++ GLC+ G  ++A+ L  +       P++
Sbjct: 159 REAMTVFVGMRADS------CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNI 212

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN+LI G C+A +   A ++F  M      P+V T+  ++  LCK+ K++ A  L   
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV+ G+ PN  TY  L+ G C  G +  A  L   ME+ G   +D ++++LI+  CK ++
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           VEEA      +V KG+K   V Y +L  GL +  +++ A +L  +M  +G   D  +Y++
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            IDGLC+   + +A  +   +     +     Y  +ID L +    +   ++F  +    
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P++VTY + ++  C +G+M+ A  + + M +    P+++T++ LI G+  +   S+  
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
                M  K   P+    ++++ L+VK   S  S+
Sbjct: 513 STFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 249/541 (46%), Gaps = 55/541 (10%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNA 131
           L   +   K + T L   GL P+ Y Y   +  +C+ G ++     F  + LR C    A
Sbjct: 84  LAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TA 142

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGC----------------------------- 162
            T+ +L+ GL     + EA  +F  ++A  C                             
Sbjct: 143 FTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202

Query: 163 ------EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
                 EPN++ YN LI+G C  G    AL +FE M +GN      C PN  TY+ +I G
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHG 256

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK G V++A  LF +M +  + P+VVTY +LI G C+      A RL   M   G+ P+
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
             TF+V++D LCK  K++EA   L  +V++GV+ N   Y +L+DG C  GKI+ A+EL  
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M S G   D  SY+ LI+G C+ K++ +A  +  +M+ KGI+ + VTY  +   L    
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             E   K+FD+M   G+  D  TYT F+   C+ G + +A  +   +       ++  YN
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--LDME 514
            LI G    G +  A+  F  +      PN  +Y ++++ +      D + D++   DM+
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556

Query: 515 ENAAAPDVIT----------FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +     + IT          +   I    R++   +       M+   + P   + + ++
Sbjct: 557 DLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616

Query: 565 D 565
           D
Sbjct: 617 D 617



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 177/379 (46%), Gaps = 24/379 (6%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K+   +      +R+   GL PN+ TY  LI   C  G +   F  
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL 304

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +  +   PN  TF+ LI  L    ++ EA      L   G + N + Y +LI+GLC+
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           TG    A  L ++M +     G V  P+  +YS++IDGLC++  + +A  +   M ++ I
Sbjct: 365 TGKIDAADELMQKMISE----GFV--PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
               VTY  +I  L         K++F +M+  G+ P +VT+ V +   C+  +M++A  
Sbjct: 419 QASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAES 478

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           ++  MV RGV PN  TYNTL+ G+  +G +++A   F  M   G K ++ SY +L+    
Sbjct: 479 MIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVV 538

Query: 359 KNKEVEEALSLYR------------EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
           K    + ++ +++            ++  + +      Y+     L  + ++E A   F 
Sbjct: 539 KKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFM 598

Query: 407 EMQRDGVAADTRTYTTFID 425
            MQ   +      YT+ ID
Sbjct: 599 GMQNANLTPSEDVYTSIID 617


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 235/485 (48%), Gaps = 18/485 (3%)

Query: 80  NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR----SCFTPN 130
            +H D R     L A    P+ +T+N  +      G +     A G + R        PN
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDE---AVGMLRRMGCDGAPAPN 187

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
           A ++N +I GL       +A  LF ++      PN ITYNT+I+G  + G       L+ 
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
           +M           KPN +TY+ ++ GLC+ G + +  A+  +M    + PD  TY+ L  
Sbjct: 248 QMLRHG------LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFD 301

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G     D      LF E + +GV+    T +++++ LCK+ K+ +A  +L  +V  G+  
Sbjct: 302 GHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQ 361

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               YNTL++G+C +G +  A  +F  M+S   + D ++YN LING  K + + EA  L 
Sbjct: 362 TTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLV 421

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            EM   G+ P+V T+NTL        Q+E    +  +MQ  G+  +  +Y + ++  CKN
Sbjct: 422 IEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G I+EAV +   + I       Q YN +ID   + G    A+ L   +    + P++VTY
Sbjct: 482 GKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTY 541

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N++I+GLC   Q+ +A +L   +     APDVI+++ LI      +   +  EL  +M +
Sbjct: 542 NLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWK 601

Query: 551 KKVMP 555
             + P
Sbjct: 602 CGIKP 606



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 233/493 (47%), Gaps = 41/493 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
           P   S+N+++A L K     T  +A  LF         PN  TYN +I+   K G +  G
Sbjct: 186 PNAFSYNVVIAGLWKA---GTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESG 242

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F  + ++LR    PN  T+N L+ GL    R+ E AA+  ++ +    P+  TY+ L +G
Sbjct: 243 FRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDG 302

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGV---------VCK--------------------PN 206
             RTG +   L+LFEE      +IG          +CK                      
Sbjct: 303 HSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQT 362

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           TV Y+T+I+G C+ G ++ A ++F QMK   I PD +TYN+LI+GL       EA  L I
Sbjct: 363 TVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVI 422

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM   GV PSV TFN ++D   +  ++++   +L  M ++G++PN  +Y ++++ FC  G
Sbjct: 423 EMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNG 482

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           KI  A  +   M           YN +I+ Y +    ++A  L  +M S G+ P++VTYN
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYN 542

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GL +  Q+  A +L D ++  G+A D  +Y T I   C       A+EL + +   
Sbjct: 543 LLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC 602

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +   + Y  L   L  +GR+     L+  +    +VP    YNIM+      G+  K 
Sbjct: 603 GIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKV 662

Query: 507 RDLFLDMEENAAA 519
             L  +M +   A
Sbjct: 663 EALRKEMSDKGIA 675



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 187/372 (50%), Gaps = 1/372 (0%)

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK-DENINPDVVTYNSLIHGLCHAND 257
           +    +P+T T++  +      G +D+A  +  +M  D    P+  +YN +I GL  A  
Sbjct: 144 VAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGT 203

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             +A +LF EM ++ V P+ +T+N ++D   K   ++   RL   M++ G++PN  TYN 
Sbjct: 204 DCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNV 263

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+ G C  G++     +   M S     D  +Y+IL +G+ +  + +  LSL+ E V KG
Sbjct: 264 LLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKG 323

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           +K    T + L  GL +  ++  A ++   +   G+   T  Y T I+G C+ G +  A 
Sbjct: 324 VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAF 383

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            +F+ ++      D   YN LI+GL K  R+  A +L   +    + P+V T+N +I   
Sbjct: 384 SIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAY 443

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              GQ++K   +  DM+E    P+V+++  +++ F +  +  +   +L  M  K V+P A
Sbjct: 444 GRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGA 503

Query: 558 SIVSIVVDLLVK 569
            + + ++D  ++
Sbjct: 504 QVYNAIIDAYIE 515



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 1/332 (0%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           PD  T+N  +     A D +EA  +   M  D    P+  ++NV++  L K     +A +
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L D M ++ V PN  TYNT++DG    G +     L+  M   G K + ++YN+L++G C
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   + E  ++  EM S+ + P   TY+ LF G       +  L LF+E  + GV     
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T +  ++GLCK+G I +A E+ +TL           YN LI+G C+ G L+ A+ +F  +
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
              ++ P+ +TYN +I GL    ++ +A DL ++ME+N   P V TF+ LI  + R  + 
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            K   +L  M+EK + P+      +V+   KN
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 13/306 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           AF IF  M      P  ++ +N L+  L K     + +D    +   G+ P++ T+N LI
Sbjct: 382 AFSIFQQMKSRLIRPDHIT-YNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + + + G++   FI    +      PN  ++ S++       +I+EA A+   +      
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVL 500

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P    YN +I+     G T  A  L E+M +          P+ VTY+ +I GLCK+  +
Sbjct: 501 PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSG------VPPSIVTYNLLIKGLCKQSQI 554

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+ L   +++  + PDV++YN+LI   C+ ++ + A  L  EM   G++PS  T+ ++
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
              L    ++ E   L   M+ + V P +  YN ++D +   G+ ++ E L   M   G 
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674

Query: 344 KHDDVS 349
              D +
Sbjct: 675 AVGDYT 680



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 9/277 (3%)

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH----DDVSYNILIN 355
            +L+V    RP+  T+N  +    + G ++ A    G +  MGC      +  SYN++I 
Sbjct: 140 FELLVAARARPDTFTWNKAVQACVVAGDLDEA---VGMLRRMGCDGAPAPNAFSYNVVIA 196

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G  K     +A+ L+ EM  K + P  +TYNT+  G  +   +E   +L+ +M R G+  
Sbjct: 197 GLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKP 256

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TY   + GLC+ G + E   +   +   K   D   Y+ L DG  ++G  +    LF
Sbjct: 257 NVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLF 316

Query: 476 C-SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
             S+  GV +    T +I++ GLC DG++ KA ++   +  +      + ++ LI+G+ +
Sbjct: 317 EESVKKGVKI-GAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQ 375

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           I +      +  +MK + + PD    + +++ L K E
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVE 412



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 7/161 (4%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTY 99
           + ++AF + + M +    PP + ++N+L+  L K             L   GL P++ +Y
Sbjct: 518 STDQAFMLAEKM-KSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISY 576

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N LI+  C              + +    P+  T+  L   L    R+ E   L+ ++  
Sbjct: 577 NTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLD 636

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
               P    YN +++   + G       L +EM++    +G
Sbjct: 637 KDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVG 677


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 224/474 (47%), Gaps = 22/474 (4%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A GL PN+  YN +IN  CK    S       ++++S F P+  TFN++I G   E  
Sbjct: 177 MRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD 236

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  L  +    G EPN ++Y  LI+G C  G  M+A +L  EM  G G       P+
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMM-GRGHT-----PD 290

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T   +I GL   G V+ A  +  +M +  + PD   YN LI GLC     + AK L  
Sbjct: 291 MITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLE 350

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM++Q VQP    +  ++D   ++ K+ +A ++ + M ++   P+   YN ++ G+C  G
Sbjct: 351 EMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFG 409

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +  A     SM   GC  D+ +Y  L++GY K  ++  +L L  +M+ +  KP + TY 
Sbjct: 410 MMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYA 469

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L  G   I     A  LF +MQ +G+  +   YT  I  L K   +I+A   F  + + 
Sbjct: 470 SLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLN 529

Query: 447 KCELDIQAYNCLIDGL--CKSGRL-------KFAWE------LFCSLPHGVLVPNVVTYN 491
            C  +    + L++GL  C+ G +       K A E      +F  L    L P +  YN
Sbjct: 530 HCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYN 589

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            +I  LC    + KA DL   M      PD ITF  L++GF    E  K    L
Sbjct: 590 AIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSAL 643



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 217/444 (48%), Gaps = 7/444 (1%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           +++GL  E R+ E   L       GC P  + YN LI+G CR G     L L  EM    
Sbjct: 87  MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK- 145

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
              G++  P  VTY  II  L ++G + K ++L  +M+   ++P+V  YN++I+ LC   
Sbjct: 146 ---GII--PTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCR 200

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             ++A  +  +M+     P VVTFN ++   C+   + EA +LL   ++RG+ PN  +Y 
Sbjct: 201 SASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYT 260

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L+ GFC+ G+   A +L   M   G   D ++   LI+G   + +V +AL +  +M  +
Sbjct: 261 PLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAER 320

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            + P    YN L  GL +   +  A  L +EM    V  D   YTT IDG  ++  + +A
Sbjct: 321 QVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDA 380

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            ++F  +    C  DI AYN +I G CK G +K A     S+     +P+  TY  ++ G
Sbjct: 381 RKIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDG 439

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               G +  +  L  DM +    P++ T+  LI G+  I +     +L  KM+ + + P+
Sbjct: 440 YAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPN 499

Query: 557 ASIVSIVVDLLVKNEISLKSLPSF 580
               ++++  L K +  +++   F
Sbjct: 500 VVHYTVLIGSLFKKDKVIQAAAYF 523



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 186/386 (48%), Gaps = 7/386 (1%)

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            ++ GLC  G       L E         G  C P  V Y+ +IDG C+ G + +   L 
Sbjct: 86  VMVRGLCLEGRVEEGRGLIE------ARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLL 139

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M+ + I P VVTY ++IH L    D  + + L  EM  +G+ P+V  +N +++ LCK 
Sbjct: 140 GEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKC 199

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
           R   +AS +L+ MV+    P+  T+NT++ GFC  G +  A +L       G + + +SY
Sbjct: 200 RSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSY 259

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             LI+G+C   E   A  L  EM+ +G  P ++T   L  GL    QV  AL + ++M  
Sbjct: 260 TPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAE 319

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
             V  D   Y   I GLCK   +  A  L   +   K + D   Y  LIDG  +S +L  
Sbjct: 320 RQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSD 379

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A ++F  +      P++V YN+MI+G C  G M +A      M +    PD  T+  L+ 
Sbjct: 380 ARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVD 438

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPD 556
           G+ +  + S    LL  M +++  P+
Sbjct: 439 GYAKKGDISASLRLLCDMMKRRCKPN 464



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 139/274 (50%), Gaps = 5/274 (1%)

Query: 301 DLMVQRGVRPNACTYNT--LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +++V+ G    A  Y+T  ++ G CL G++     L  +    GC    V YN+LI+GYC
Sbjct: 71  EMLVREG---GADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYC 127

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +  ++   L L  EM +KGI PTVVTY  +   L     +     L  EM+  G++ + +
Sbjct: 128 RRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQ 187

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            Y T I+ LCK     +A ++   +   +   D+  +N +I G C+ G ++ A +L    
Sbjct: 188 IYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREA 247

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L PN ++Y  +I G C  G+   A DL ++M      PD+IT   LIHG +   + 
Sbjct: 248 IRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQV 307

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           +    +  KM E++VMPDA+I ++++  L K  +
Sbjct: 308 NDALIVREKMAERQVMPDANIYNVLISGLCKKRM 341



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 9/218 (4%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN++TY  LI  +C IG        F ++      PN   +  LI  L  + ++++AAA 
Sbjct: 463 PNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAY 522

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG---------NGEIGVVCK 204
           F  +    C PN  T + L+NGL    H M+  N  +               G I     
Sbjct: 523 FEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLD 582

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P    Y+ II  LC+   + KA  L  +M ++   PD +T+ SL++G   A +  + +  
Sbjct: 583 PRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSA 642

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
                 Q     +  +  + ++   +  + E SR+L L
Sbjct: 643 LPNEFQQDEFEIITKYMALFNQHVTSSVVGEVSRILQL 680


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 226/454 (49%), Gaps = 11/454 (2%)

Query: 64  PPPVSSFNILLASLA-KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           P  V S    + SLA   K +D      G   ++Y Y  L++   +  R       F R 
Sbjct: 11  PRLVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRE 70

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L +   P+  +F  +I+          A      +++ G  P+V  YN ++ G C  G  
Sbjct: 71  LCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRV 130

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL  F       G++G  CKPN  TY+T+I+GLCK G +D A  LF ++  + ++PD 
Sbjct: 131 GRALIKF-------GKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDG 183

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY++L+HGLC A     A +++  M++         +N + D  CK R++DEA  +L  
Sbjct: 184 FTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKT 243

Query: 303 MVQRGVRPNACTYNTLMDGFC-LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           M+QRG +P+  TYN +++G C    +I  A  LF  M    C  + V+Y  +I G  K  
Sbjct: 244 MIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIY 303

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           EV+  L L++ M   G+ P    Y++L     ++ +++ A  +  +  R+ V  D   YT
Sbjct: 304 EVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYT 363

Query: 422 TFIDGLC--KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           T I G C  +   + EA+ LF+ ++  +   ++  YN ++ GLCK+GR   A+++F  + 
Sbjct: 364 TLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMF 423

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
                PN +T+ +M  G+ + G+ DK   +F+DM
Sbjct: 424 KVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDM 457



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 211/421 (50%), Gaps = 10/421 (2%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +  L+  L    R  EA   F +     C P++ ++  +I   C   +   A      M 
Sbjct: 47  YTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMR 106

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
           +    +G+   P+   Y+ ++ G C  G V +A   F +M  +   P+V TYN++I+GLC
Sbjct: 107 S----LGI--PPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLC 159

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                + A  LF  +    V P   T++ ++  LC+  +++ A ++ D+M++     +A 
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG 219

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYRE 372
            YN + DGFC   +++ A E+  +M   GCK   V+YN +ING C+ K  +EEA  L+++
Sbjct: 220 AYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQ 279

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           MV     P  VTY T+ LGL +I++V+  L+LF  M + G++ D   Y + I    K   
Sbjct: 280 MVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRK 339

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKS--GRLKFAWELFCSLPHGVLVPNVVTY 490
           + EA  + +         D+  Y  LI G C++   R+  A  LF ++    + PNV+TY
Sbjct: 340 LDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITY 399

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           NI+++GLC  G+ D+A  +F +M +   +P+ +TF ++  G I   +  K   +   M  
Sbjct: 400 NIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVY 459

Query: 551 K 551
           K
Sbjct: 460 K 460



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 165/332 (49%), Gaps = 2/332 (0%)

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           K E    DV  Y  L+H L  A    EA R F   +    +PS+ +F +I+   C  R  
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
             A R L  M   G+ P+   YN ++ G+C +G++ RA   FG M    CK +  +YN +
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTV 154

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING CK  +++ A+ L+  +    + P   TY+TL  GL +  ++E A+K++D M     
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK-SGRLKFAW 472
             D   Y    DG CK   + EA+E+ +T+    C+  +  YNC+I+G+C+   R++ A+
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAY 274

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            LF  +      PN VTY  MI GL    ++ +  +LF  M +   +PD   +  LI+ F
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAF 334

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +++ +  +   +L       V PD  + + ++
Sbjct: 335 VKVRKLDEAKSILQDAARNHVGPDVYMYTTLI 366



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 190/386 (49%), Gaps = 39/386 (10%)

Query: 65  PPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + SF I++          +   Y   + + G+ P++  YN+++  +C +GRV    I 
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIK 136

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG++ ++C  PN AT+N++I GL    +I  A  LFT+L     +P+  TY+TL++GLC+
Sbjct: 137 FGKMGKTC-KPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 179 TGHTMIALNLFEEM--ANGNGEIGVV---------------------------CKPNTVT 209
                 A+ +++ M  AN +G+ G                             CKP+ VT
Sbjct: 196 AERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVT 255

Query: 210 YSTIIDGLCK-EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           Y+ II+G+C+ +  +++A  LF QM   +  P+ VTY ++I GL    +      LF  M
Sbjct: 256 YNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGM 315

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK- 327
              G+ P    ++ ++    K RK+DEA  +L    +  V P+   Y TL+ G+C   K 
Sbjct: 316 SKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKP 375

Query: 328 -INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A  LF +M+      + ++YNI++ G CK    +EA  +++EM      P  +T+ 
Sbjct: 376 RVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFK 435

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDG 412
            + +G+    + +   ++F +M   G
Sbjct: 436 VMTMGMIHCGKTDKFERIFMDMVYKG 461



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 195/404 (48%), Gaps = 14/404 (3%)

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K  G   +V  Y  L++ L R   T  A+  F+       E+   C+P+  +++ II   
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKR------ELCAHCRPSLYSFTIIIQCF 89

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM--MDQGVQP 275
           C      +A      M+   I PDV  YN ++ G C   D     R  I+   M +  +P
Sbjct: 90  CNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYC---DLGRVGRALIKFGKMGKTCKP 146

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +V T+N +++ LCK  K+D A  L   +    V P+  TY+TL+ G C   ++  A +++
Sbjct: 147 NVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVY 206

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M       D  +YN + +G+CK + V+EAL + + M+ +G KP+VVTYN +  G+ + 
Sbjct: 207 DMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQY 266

Query: 396 -HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            +++E A +LF +M       +  TY T I GL K   +   +ELF+ +       D  A
Sbjct: 267 KNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYA 326

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN--DGQMDKARDLFLD 512
           Y+ LI    K  +L  A  +        + P+V  Y  +I G C     ++D+A  LF +
Sbjct: 327 YHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQN 386

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           M++    P+VIT+++++ G  +     +  ++  +M + K  P+
Sbjct: 387 MKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPN 430



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 11/335 (3%)

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           DW+  +        +G +  V  +  ++  L + R+  EA R     +    RP+  ++ 
Sbjct: 32  DWSSKQ--------EGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFT 83

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++  FC +    RA    G M S+G   D  +YN+++ GYC    V  AL  + +M  K
Sbjct: 84  IIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GK 142

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
             KP V TYNT+  GL +  +++ A+ LF  +  D V  D  TY+T + GLC+   +  A
Sbjct: 143 TCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAA 202

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           ++++  +     + D  AYN + DG CK  R+  A E+  ++      P+VVTYN +I G
Sbjct: 203 IKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIING 262

Query: 497 LCN-DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           +C    ++++A  LF  M  +   P+ +T+  +I G  +I E  +  EL   M +  + P
Sbjct: 263 VCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSP 322

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           D      ++   VK    L    S L    +  VG
Sbjct: 323 DGYAYHSLIYAFVKVR-KLDEAKSILQDAARNHVG 356



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 16/267 (5%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
           A  ++D ML  +       ++N +     K +  D  L         G  P++ TYN +I
Sbjct: 202 AIKVYDMMLEAN-YDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCII 260

Query: 104 NCFCKI-GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           N  C+   R+   +  F +++ S   PNA T+ ++I GL     +     LF  +   G 
Sbjct: 261 NGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGL 320

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK--E 220
            P+   Y++LI    +      A ++ ++ A  +  +G    P+   Y+T+I G C+  +
Sbjct: 321 SPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNH--VG----PDVYMYTTLISGYCRARK 374

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             VD+A  LF  MKD  + P+V+TYN ++ GLC    ++EA ++F EM      P+ +TF
Sbjct: 375 PRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTF 434

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRG 307
            V+   +    K D+  R+   MV +G
Sbjct: 435 KVMTMGMIHCGKTDKFERIFMDMVYKG 461


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 236/467 (50%), Gaps = 12/467 (2%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  V  +N L+A   +    D        +   G+ PN+ TY   I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  ++R+    +  T ++L+ GL  + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K        +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++P+ VTY  LI  LC A++ +EA+++ +EM ++ + P+VVTF+ +++   K   +D+A+
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
               +M +RG+ PN  TY TL+DGF      + A E++  M   G K +    + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            +N ++EEA++L+++    G+    V Y TL  GLF+   +  A K   E+    +  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y  FI+ LC  G   EA      +R +  + D   YN +I   C+ G    A +L   
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +    + PN++TYN ++ GL   G ++KA+ L  +M     +P  +T
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 246/534 (46%), Gaps = 43/534 (8%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVS--- 113
           +  S P   ++NILLA+L+ + H    L      G+  +  T N L+   C+ G+V    
Sbjct: 96  LRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 114 ---------------------LGFIAFG----------RILRSCFTPNAATFNSLIKGLH 142
                                L    FG          R+       +   +N+L+ G  
Sbjct: 156 ALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
              ++  A  +   +K  G +PNV TY   I   CRT     A +L+E M       GV+
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVL 271

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
              + VT S ++ GLC++G   +A ALF +M      P+ VTY +LI  L  A    E  
Sbjct: 272 L--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            L  EM+ +GV   +VT+  +MD L K  K DE    L   +   + PN  TY  L+D  
Sbjct: 330 SLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C    ++ AE++   ME      + V+++ +ING+ K   +++A    R M  +GI P V
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV 449

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY TL  G F+    + AL+++ +M  +GV  +     + ++GL +NG I EA+ LF+ 
Sbjct: 450 VTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKD 509

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
                  LD   Y  LIDGL K+G +  A++    L    ++P+ V YN+ I  LC  G+
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGK 569

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             +A+    +M      PD  T++ +I    R  E +K  +LLH+MK   + P+
Sbjct: 570 FKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 238/549 (43%), Gaps = 64/549 (11%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY +LI+  CK   V         +     +PN  TF+S+I G      + +A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------ANG- 195
                +K  G  PNV+TY TLI+G  +      AL ++ +M                NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 196 --NGEI-----------GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             NG+I           G     + V Y+T+IDGL K G +  A     ++ D N+ PD 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN  I+ LC    + EAK    EM + G++P   T+N ++   C+  +  +A +LL  
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--------------CK---- 344
           M    ++PN  TYNTL+ G    G + +A+ L   M S G              C     
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 345 ----------------HDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
                           H D++ YN L+   C +    +A  +  EM+  GI P  +T+N 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L LG  +   +++A   + +M    ++ +  T+ T + GL   G I EA  +   +    
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSG 794

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E +   Y+ L  G  K      A  L+C +     VP V TYN +I      G M +A+
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +LF DM++    P   T+D+L+ G+ RI   ++V + L  MKEK   P    +S +    
Sbjct: 855 ELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAF 914

Query: 568 VKNEISLKS 576
            K  ++ ++
Sbjct: 915 SKPGMTWQA 923



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 221/508 (43%), Gaps = 43/508 (8%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L K   Y   +   G+ PN+ TY  LI+ F K          +  +L      N    +S
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ GL    +I EA ALF      G   + + Y TLI+GL + G    A    +E+ + N
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 197 GE---------IGVVC--------------------KPNTVTYSTIIDGLCKEGFVDKAK 227
                      I  +C                    KP+  TY+T+I   C++G   KA 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  +MK  +I P+++TYN+L+ GL       +AK L  EM+  G  PS +T   ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            ++R++D    + + M+  G+  +   YNTL+   C  G   +A  +   M   G   D 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           +++N LI G+CK+  ++ A + Y +M+ + I P + T+NTL  GL  + ++  A  +  E
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-------DIQAYNCLID 460
           M++ G+  +  TY     G  K    +EA+ L+       CE+        +  YN LI 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY-------CEMVGKGFVPKVSTYNALIS 842

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
              K+G +  A ELF  +    + P   TY+I++ G        + +    DM+E   +P
Sbjct: 843 DFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSP 902

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKM 548
              T   +   F +     +   LL  +
Sbjct: 903 SKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 41/373 (10%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           +L    + K + T +   GL P+  TYN +I   C+ G  +        +  S   PN  
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT------------------------ 168
           T+N+L+ GL     + +A  L  ++ + G  P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 169 -----------YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
                      YNTL+  LC  G T  A  + EEM      +G    P+T+T++ +I G 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGIAPDTITFNALILGH 739

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK   +D A A + QM  +NI+P++ T+N+L+ GL       EA  + IEM   G++P+ 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +T++++     K     EA RL   MV +G  P   TYN L+  F   G + +A+ELF  
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+  G      +Y+IL++G+ + +   E     ++M  KG  P+  T + +     +   
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919

Query: 398 VEHALKLFDEMQR 410
              A +L   + R
Sbjct: 920 TWQAQRLLKNLYR 932



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 161/369 (43%), Gaps = 47/369 (12%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P  V YN L+  L   +D   A  +  EM  +GV    VT N ++  LC+N ++D A+ L
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 300 LDLMVQRGVRPNACTYNTL----MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
                  G+ P   +  TL    + GF   G    A  +   M + G   D V YN L+ 
Sbjct: 158 A--DRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+C+  +V+ A  +   M   G+ P V TY    +       VE A  L++ M R+GV  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  T +  + GLC++G   EA  LFR +  +    +   Y  LID L K+GR K    L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 476 CSL-PHGV----------------------------------LVPNVVTYNIMIQGLCND 500
             +   GV                                  L PN VTY ++I  LC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
             +D+A  + L+MEE + +P+V+TF  +I+GF++     K  E    MKE+ + P+    
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 561 SIVVDLLVK 569
             ++D   K
Sbjct: 453 GTLIDGFFK 461


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 150/470 (31%), Positives = 220/470 (46%), Gaps = 30/470 (6%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFT----PNAATFNSLIKGL 141
           R+      PN+ TY  L++ F K  +  LG+    RI+    T    PN + FNSL+   
Sbjct: 301 RMRCNSCIPNVVTYRTLLSGFLK--KKQLGWCK--RIINMMMTEGCNPNPSLFNSLVHSY 356

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-IG 200
             E     A  L  ++   GC P  + YN  I  +C     + + +L +      GE + 
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLDLAEKIYGEMLA 415

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
             C  N V  +     LC  G  DKA  L  +M  +   PD  TY+ +I  LCHA    +
Sbjct: 416 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 475

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  LF EM   GV P V T+ +++D  CK   +++A  L + M   G  P   TY  L+ 
Sbjct: 476 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 535

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--- 377
            +    ++ +A ++F  M   GC+ +DV+Y  L++G CK   + +A  +Y +++      
Sbjct: 536 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 595

Query: 378 -------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
                        + P VVTY  L  GL + H+V+HA +L D M   G   +   Y   I
Sbjct: 596 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 655

Query: 425 DGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           DG CK G I  A E+F  L++ KC     +  Y  LID + K GRL  A ++   +    
Sbjct: 656 DGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 713

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
             PNVVTY  MI GLC  G+ +KA  L   MEE   +P+V+T+  LI G 
Sbjct: 714 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 219/465 (47%), Gaps = 29/465 (6%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           SC  PN  T+ +L+ G   + ++     +   +   GC PN   +N+L++  C       
Sbjct: 306 SCI-PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 364

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE------GFVDKAKALFLQMKDENI 238
           A  L   M          C P  V Y+  I  +C +        +D A+ ++ +M   N 
Sbjct: 365 AYKLLNRMTTCG------CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANC 418

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             + V   +    LC    +++A +L  EMM +G  P   T++ ++  LC   K+++A  
Sbjct: 419 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 478

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M   GV P+  TY  L+D FC  G I +A+ LF  M S+GC    V+Y  LI+ Y 
Sbjct: 479 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 538

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM---------- 408
           K K+V +A  ++  MV  G +P  VTY  L  GL +   +  A +++ ++          
Sbjct: 539 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 598

Query: 409 ------QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
                  R  +A +  TY   +DGLCK   +  A EL   +    CE +   Y+ LIDG 
Sbjct: 599 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 658

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK+G++  A E+F  +     +P+V TY  +I  +  DG++D A  +   M +++  P+V
Sbjct: 659 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 718

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +T+  +I G  RI E  K  +LL  M+EK   P+    + ++D L
Sbjct: 719 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 241/559 (43%), Gaps = 66/559 (11%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           RL   G  P+  TYN L+      G+V LGF     +  S F  +  T       L  E 
Sbjct: 199 RLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEG 258

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R  +A  +  + + F  +  + T+  +I+GL    +   A++    M   +      C P
Sbjct: 259 RWADALDMIER-EDFKLDTVLCTH--MISGLMEASYFDEAMSFLHRMRCNS------CIP 309

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N VTY T++ G  K+  +   K +   M  E  NP+   +NSL+H  C+  D+  A +L 
Sbjct: 310 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 369

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKM-------------------------------- 293
             M   G  P  V +N+ +  +C   K+                                
Sbjct: 370 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 429

Query: 294 ---------DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
                    D+A +L+  M+++G  P+  TY+ ++   C   K+ +A  LF  M+ +G  
Sbjct: 430 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 489

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D  +Y ILI+ +CK   +E+A  L+ EM S G  PTVVTY  L     +  QV  A  +
Sbjct: 490 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 549

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------RILKCE----- 449
           F  M   G   +  TY   +DGLCK G I +A E++  L              CE     
Sbjct: 550 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 609

Query: 450 -LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             ++  Y  L+DGLCK+ ++  A EL  ++      PN + Y+ +I G C  G++D A++
Sbjct: 610 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 669

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +FL M +    P V T+  LI    +        ++L +M +    P+    + ++D L 
Sbjct: 670 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 729

Query: 569 KNEISLKSLPSFLVQERQG 587
           +   S K+L    + E +G
Sbjct: 730 RIGESEKALKLLSLMEEKG 748



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 211/441 (47%), Gaps = 35/441 (7%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           I + M+    +P P S FN L+ S    K Y        R+   G  P    YNI I   
Sbjct: 333 IINMMMTEGCNPNP-SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 391

Query: 107 CKIGRV------SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           C   ++       L    +G +L +    N     +  + L    +  +A  L  ++   
Sbjct: 392 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 451

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+  TY+ +I  LC       A  LF+EM      +GV   P+  TY+ +ID  CK 
Sbjct: 452 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM----VGVT--PDVYTYTILIDSFCKA 505

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +++A+ LF +M+    +P VVTY +LIH    A    +A  +F  M+D G +P+ VT+
Sbjct: 506 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 565

Query: 281 NVIMDELCKNRKMDEASRLLDLMV----------------QRGVRPNACTYNTLMDGFCL 324
             ++D LCK   + +A  +   ++                +  + PN  TY  L+DG C 
Sbjct: 566 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 625

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             K++ A EL  +M S GC+ + + Y+ LI+G+CK  +++ A  ++ +M   G  P+V T
Sbjct: 626 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT 685

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +L   +F+  +++ A+K+  +M +D    +  TYT  IDGLC+ G   +A++L   + 
Sbjct: 686 YTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLME 745

Query: 445 ILKCELDIQAYNCLIDGLCKS 465
              C  ++  Y  LIDGL +S
Sbjct: 746 EKGCSPNVVTYTALIDGLGQS 766



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 231/542 (42%), Gaps = 69/542 (12%)

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N+L+   C+ G  +      GR+    + P+  T+N+L++ L +  ++     +  ++  
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSE 237

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G   +  T     + LC+ G    AL++ E             K +TV  + +I GL +
Sbjct: 238 SGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF---------KLDTVLCTHMISGLME 288

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
             + D+A +   +M+  +  P+VVTY +L+ G          KR+   MM +G  P+   
Sbjct: 289 ASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSL 348

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI------NRAEE 333
           FN ++   C  +    A +LL+ M   G  P    YN  +   C   K+      + AE+
Sbjct: 349 FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 408

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           ++G M +  C  + V+        C   + ++A  L +EM+ KG  P   TY+ +   L 
Sbjct: 409 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 468

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI- 452
              +VE A  LF EM+  GV  D  TYT  ID  CK G I +A  LF  +R + C   + 
Sbjct: 469 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 528

Query: 453 ----------------QA------------------YNCLIDGLCKSGRLKFAWELFCSL 478
                           QA                  Y  L+DGLCK+G +  A+E++  L
Sbjct: 529 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588

Query: 479 ----------------PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
                               L PNVVTY  ++ GLC   ++D A +L   M  +   P+ 
Sbjct: 589 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 648

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN---EISLKSLPS 579
           I +D LI GF +  +     E+  +M +   +P     + ++D + K+   ++++K L  
Sbjct: 649 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 708

Query: 580 FL 581
            L
Sbjct: 709 ML 710


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 244/527 (46%), Gaps = 42/527 (7%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G  PN+  YN LI+ +C  G +      F  +  +  +PN  T+  LI GL    ++ 
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG--------NGEI 199
            A  LF+++   G EPNV+TY  LI G C  GH   A  L   M  NG        +  I
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 200 GVVCKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
             +CK                     N V Y+++IDGLCK G +D A  L  +M  E   
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD  +Y+SLI GLC     ++A  +  +MM++G+Q S VT+ +I+DEL +    +   ++
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKI 444

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            D M+  G+ P+  TY   +  +C  G++  AE +   M   G   + V+YN LI GY  
Sbjct: 445 FDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLF------------LGLFEIHQVEHALKLFDE 407
              V +A S +  MV KG KP   +Y  L             + +++I  ++    L ++
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           +    +      Y+ FI  LC+   + EA   F  ++          Y  +ID  C+   
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKI 624

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L  A  L  S+     +P++ +Y I+I  LC  G    A+++F D+    +  D I + +
Sbjct: 625 LTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKI 684

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV-DLLVKNEIS 573
           LI+G ++    ++ + LL  MKE    P  +I +++  ++ V NE+ 
Sbjct: 685 LIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQ 731



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/541 (28%), Positives = 250/541 (46%), Gaps = 55/541 (10%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNA 131
           L   +   K + T L   GL P+ Y Y   +  +C+ G ++     F  + LR C    A
Sbjct: 84  LAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TA 142

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGC----------------------------- 162
            T+ +L+ GL     + EA A+F  ++A  C                             
Sbjct: 143 FTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEE 202

Query: 163 ------EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
                 EPN++ YN LI+G C  G    AL +FE M +GN      C PN  TY+ +I G
Sbjct: 203 AMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHG 256

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK G V++A  LF +M +  + P+VVTY +LI G C+      A RL   M   G+ P+
Sbjct: 257 LCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPN 316

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
             TF+V++D LCK  K++EA   L  +V++GV+ N   Y +L+DG C  GKI+ A+EL  
Sbjct: 317 DWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQ 376

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M S G   D  SY+ LI+G C+ K++ +A  +  +M+ KGI+ + VTY  +   L    
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREV 436

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             E   K+FD+M   G+  D  TYT F+   C+ G + +A  +   +       ++  YN
Sbjct: 437 GSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYN 496

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--LDME 514
            LI G    G +  A+  F  +      PN  +Y ++++ +      D + D++   DM+
Sbjct: 497 TLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK 556

Query: 515 ENAAAPDVIT----------FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +     + IT          +   I    R++   +       M+   + P   + + ++
Sbjct: 557 DLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616

Query: 565 D 565
           D
Sbjct: 617 D 617



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 203/436 (46%), Gaps = 10/436 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P     N+L+  L       +  +L +++ A     N+ TY TLIN  C  G    A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPA----RNLRTYTTLINAYCLAGDIPAAKQH 94

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              + +          P++  Y++ + G C+ G +  A  +F+ M          TY +L
Sbjct: 95  LTSLLHAG------LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTAL 148

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           +HGL  A    EA  +F+ M      P    +  ++  LC+  + +EA  LL+  +  G 
Sbjct: 149 LHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGF 208

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            PN   YN L+DG+C  G++  A ++F  M+   C  +  +Y  LI+G CK+ +VE A+ 
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L+  MV  G++P VVTY  L  G      ++ A +L   M+ +G+  +  T++  ID LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K   + EA     +L     +++   Y  LIDGLCK+G++  A EL   +     VP+  
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +Y+ +I GLC   ++ +A  +  DM E       +T+ ++I   +R        ++  KM
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448

Query: 549 KEKKVMPDASIVSIVV 564
               + PD    ++ V
Sbjct: 449 IATGINPDIVTYTVFV 464



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 4/361 (1%)

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +T++  L +       ++L  +M   N+     TY +LI+  C A D   AK+    ++ 
Sbjct: 45  NTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQHLTSLLH 100

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P    +   +   C+   +  A R+  LM  RG    A TY  L+ G    G +  
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVRE 160

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +F  M +  C  D   Y  +++G C+    EEA  L  E +S G +P +V YN L  
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G     ++EHALK+F+ M  +  + + RTYT  I GLCK+G +  A+ LF  +     E 
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           ++  Y  LI G C  G L+ A+ L   +    LVPN  T++++I  LC   ++++A+   
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             + +     + + +  LI G  +  +    +EL+ KM  +  +PDA   S ++D L + 
Sbjct: 341 GSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQ 400

Query: 571 E 571
           +
Sbjct: 401 K 401



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 97/255 (38%), Gaps = 53/255 (20%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES----- 145
           G+FPNL TYN LI  +  +G VS  F  F  ++   + PN  ++  L++ +  +S     
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546

Query: 146 ------------------------------------------RIMEAAALFTKLKAFGCE 163
                                                     R+ EA   F  ++     
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+   Y ++I+  CR      AL L + M   +G +     P+  +Y  II  LC+ G  
Sbjct: 607 PSEDVYTSIIDCCCRLKILTDALTLLDSMTK-SGYL-----PHLESYRIIISSLCEGGNF 660

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             AK +F  +  +  N D + +  LI+GL       E   L   M + G QPS     +I
Sbjct: 661 RTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMI 720

Query: 284 MDELCKNRKMDEASR 298
             E+    ++ E +R
Sbjct: 721 TGEITVTNEVQEIAR 735


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 196/349 (56%), Gaps = 6/349 (1%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C P+VITY  LI   C       A+ L +EM +        CKP+ VTY+ +++G+CKEG
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG------CKPDVVTYNVLVNGMCKEG 65

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+A      M      P+V+T+N ++  +C    W +A++L  EM+ +G  PSVVTFN
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++++ LC+   +  A  +L+ M   G  PN+ +YN L+ GFC   K++RA +    M S 
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC  D V+YN ++   CK+ +V+ A+ L  ++ SKG  P ++TYNT+  GL ++ + + A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++L  EM+  G+  D  TY++ I GL + G + EA++ F  +     + +   YN ++ G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           LCK+ +   A +    +      P  V+Y I+I+G+ N+G   +A +L 
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL 354



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 199/364 (54%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C P+ +TY+ +I+  C E  V +A  L  +M      PDVVTYN L++G+C     +EA 
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           +    M   G QP+V+T N+I+  +C   +  +A +LL  MV++G  P+  T+N L++  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G + RA ++   M + GC  + +SYN L++G+CK K+++ A+     MVS+G  P +
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTYNT+   L +  +V+ A++L +++   G +    TY T IDGL K G   +AVEL   
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +R    + D+  Y+ LI GL + G+++ A + F  +    + PN  TYN ++ GLC   Q
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            D+A D    M      P  +++ +LI G        +  ELL+++  + V+  +S   +
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQV 371

Query: 563 VVDL 566
           VV L
Sbjct: 372 VVRL 375



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 180/351 (51%), Gaps = 6/351 (1%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
           +P++ TY ILI   C    V         +      P+  T+N L+ G+  E R+ EA  
Sbjct: 13  YPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
               + ++G +PNVIT+N ++  +C TG  M A  L  EM          C P+ VT++ 
Sbjct: 73  FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG------CSPSVVTFNI 126

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I+ LC++G + +A  +  +M      P+ ++YN L+HG C     + A +    M+ +G
Sbjct: 127 LINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P +VT+N ++  LCK+ K+D A  LL+ +  +G  P   TYNT++DG   +GK ++A 
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           EL   M   G K D ++Y+ LI G  +  +VEEA+  + ++   G+KP   TYN++  GL
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            +  Q + A+     M   G      +YT  I+G+   G   EA+EL   L
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 187/359 (52%), Gaps = 12/359 (3%)

Query: 65  PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++ IL+      + + +       + + G  P++ TYN+L+N  CK GR+      
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      PN  T N +++ + +  R M+A  L T++   GC P+V+T+N LIN LCR
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+++ E+M          C PN+++Y+ ++ G CKE  +D+A      M     
Sbjct: 134 KGLLGRAIDILEKMPTHG------CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+VTYN+++  LC     + A  L  ++  +G  P ++T+N ++D L K  K D+A  
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M  +G++P+  TY++L+ G    GK+  A + F  +E  G K +  +YN ++ G C
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLC 307

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           K ++ + A+     M+SKG KPT V+Y  L  G+      + AL+L +E+   GV   +
Sbjct: 308 KAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKS 366



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 177/338 (52%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PDV+TY  LI   C  +   +A +L  EM  +G +P VVT+NV+++ +CK  ++DEA + 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           L+ M   G +PN  T+N ++   C  G+   AE+L   M   GC    V++NILIN  C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
              +  A+ +  +M + G  P  ++YN L  G  +  +++ A++  + M   G   D  T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T +  LCK+G +  AVEL   L    C   +  YN +IDGL K G+   A EL   + 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              L P+V+TY+ +I GL  +G++++A   F D+E     P+  T++ ++ G  +  +  
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           +  + L  M  K   P     +I+++ +    ++ ++L
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 4/296 (1%)

Query: 266 IEMMDQGVQ----PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           +E++D+ ++    P V+T+ ++++  C    + +A +LLD M  RG +P+  TYN L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  G+++ A +   SM S G + + +++NI++   C      +A  L  EMV KG  P+
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           VVT+N L   L     +  A+ + ++M   G   ++ +Y   + G CK   +  A++   
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +    C  DI  YN ++  LCK G++  A EL   L      P ++TYN +I GL   G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           + D+A +L  +M      PDVIT+  LI G  R  +  +  +  H ++   V P+A
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNA 296



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 12/288 (4%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           + S P V + NI+L S+     +       T +   G  P++ T+NILIN  C+ G +  
Sbjct: 80  YGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGR 139

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                 ++     TPN+ ++N L+ G   E ++  A      + + GC P+++TYNT++ 
Sbjct: 140 AIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLT 199

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            LC+ G    A+ L  ++++        C P  +TY+T+IDGL K G  D+A  L  +M+
Sbjct: 200 ALCKDGKVDAAVELLNQLSSKG------CSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + + PDV+TY+SLI GL       EA + F ++   GV+P+  T+N IM  LCK ++ D
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            A   L  M+ +G +P   +Y  L++G    G    A EL   + S G
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 12/219 (5%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSL 114
           H   P   S+N LL    K K  D  +       + G +P++ TYN ++   CK G+V  
Sbjct: 150 HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDA 209

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                 ++     +P   T+N++I GL    +  +A  L  +++  G +P+VITY++LI 
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIA 269

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GL R G    A+  F ++       G   KPN  TY++I+ GLCK    D+A      M 
Sbjct: 270 GLSREGKVEEAIKFFHDVE------GFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMI 323

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            +   P  V+Y  LI G+ +     EA  L  E+  +GV
Sbjct: 324 SKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/619 (26%), Positives = 282/619 (45%), Gaps = 75/619 (12%)

Query: 7   CNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP-- 64
           C + ++F   P+     N      HF     R  +++     EA+ IF ++L + P+   
Sbjct: 159 CTKLYNF---PLDIQEGNILEAEQHFLQAKARGVELD----QEAYSIFVHLLCLKPNSGY 211

Query: 65  --------------PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILIN 104
                         PP  +F  ++ +  K  +    L         G   NL     L+ 
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 271

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
            +C  G +    +    I  S   PN  T++ LI G      I +A   ++++K  G   
Sbjct: 272 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 331

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V + N+++ G  +      A  +F +      E G+    N  T++T++  LCKEG ++
Sbjct: 332 SVYSLNSILEGYLKCQSWQNAFTMFNDAL----ESGLA---NVFTFNTLLSWLCKEGKMN 384

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  L+ ++  + I+P+VV+YN++I G C  ++ N A +++ EM+D G  P+ VTF ++M
Sbjct: 385 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILM 444

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D   K   ++ A  +   M    + P   T   ++ G C  G+     +LF    S G  
Sbjct: 445 DGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFV 504

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              + YN +I+G+ K   +  A ++YREM   GI P+ VTY +L  G  + + ++ ALKL
Sbjct: 505 PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKL 564

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCK---------------------NGYII--------- 434
            ++M+R G+  D + Y T IDG CK                     N +I          
Sbjct: 565 LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKN 624

Query: 435 -----EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
                EA++L++ +       D++ Y  LIDGL KSGRL +A ++   +    ++P+   
Sbjct: 625 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 684

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           + ++I GLCN GQ + AR +  DM      P V+ ++ LI G  +     +   L  +M 
Sbjct: 685 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML 744

Query: 550 EKKVMPDASIVSIVVDLLV 568
           ++ ++PD    +I  D+LV
Sbjct: 745 DRGLVPD----NITYDILV 759



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 191/385 (49%), Gaps = 13/385 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNI 101
           NEA  ++D ++    SP  VS  NI+L    K+      K Y   L+  G  PN  T+ I
Sbjct: 384 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD-NGFTPNAVTFTI 442

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ + K G +   F  F R+  +   P   T   +IKGL    R  E   LF K  + G
Sbjct: 443 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG 502

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P  + YNT+I+G  + G+  +A N++ EM     E+G+   P+TVTY+++IDG CK  
Sbjct: 503 FVPTCMPYNTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGN 556

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  L   MK + +  D+  Y +LI G C   D   A  L  E+   G+ P+   +N
Sbjct: 557 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 616

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++        ++EA  L   MV  G+  +  TY +L+DG    G++  A ++   M S 
Sbjct: 617 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 676

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   DD ++ +LING C   + E A  +  +M  K + P+V+ YNTL  G F+   ++ A
Sbjct: 677 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 736

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDG 426
            +L DEM   G+  D  TY   ++G
Sbjct: 737 FRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 186/406 (45%), Gaps = 23/406 (5%)

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC------------KEGFV 223
           L  +  T  A  LF++ A+G           +V +S ++D L             +EG +
Sbjct: 125 LTNSAETHRAQYLFDQFASGK----------SVRFSCLMDRLVECTKLYNFPLDIQEGNI 174

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+  FLQ K   +  D   Y+  +H LC   +   A  L  EM   G  P   TF  +
Sbjct: 175 LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSV 234

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +    K   + EA RL D MV  G   N     +LM G+C+ G +  A  L   +   G 
Sbjct: 235 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 294

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + V+Y++LI+G CKN  +E+A   Y EM +KGI+ +V + N++  G  +    ++A  
Sbjct: 295 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 354

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F++    G+ A+  T+ T +  LCK G + EA  L+  +       ++ +YN +I G C
Sbjct: 355 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 413

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +   +  A +++  +      PN VT+ I++ G    G ++ A  +F  M++    P   
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 473

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T  ++I G  +     +  +L +K   +  +P     + ++D  +K
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK 519



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 15/187 (8%)

Query: 394 EIHQVEHALKLFDEMQR----------DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           E H+ ++   LFD+             D +   T+ Y   +D   + G I+EA + F   
Sbjct: 130 ETHRAQY---LFDQFASGKSVRFSCLMDRLVECTKLYNFPLD--IQEGNILEAEQHFLQA 184

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +    ELD +AY+  +  LC      +A  L   +     +P   T+  +I     +G +
Sbjct: 185 KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 244

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A  L  DM     + ++     L+ G+           L++++ E  ++P+    S++
Sbjct: 245 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 304

Query: 564 VDLLVKN 570
           +D   KN
Sbjct: 305 IDGCCKN 311


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 232/455 (50%), Gaps = 19/455 (4%)

Query: 65  PPVSSFNILLASL-AKNKHYDTRLNATGLFPN--LYTYNILINCFCKIGRVSLGFIAFGR 121
           P V   NIL+  L A  +  D       L P+  + TYN ++N +C+ G +     A  R
Sbjct: 94  PAVIPCNILIKKLCADGRVADAERVVEALGPSATIITYNTMVNGYCRAGNID----AARR 149

Query: 122 ILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           ++ S  F P+  T+N LI+ L     +++A A+F  +   GC P+V+TY+ L++  C+  
Sbjct: 150 MIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKES 209

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A+ L +EM +        C+P+ VTY+ +I+ +C +G V +A  +   +      P
Sbjct: 210 GYKQAVVLLDEMRSKG------CEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKP 263

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D VTY  ++  LC +  W EA +L  +M      P  VTFN ++  LC+   +  A+++L
Sbjct: 264 DAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVL 323

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRA----EELFGSMESMGCKHDDVSYNILING 356
             M + G  P+  TY+++MDG C   +++ A    +EL   M S  C  D V++N +I  
Sbjct: 324 AQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITS 383

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG-LFEIHQVEHALKLFDEMQRDGVAA 415
            C+    + A+ +  EM   G  P + TYN +  G L +  + E AL L + M  +G+  
Sbjct: 384 LCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCP 443

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           DT TY +   GL +   +  A+ +FR ++ +    D   YN ++ GLCK  R   A + F
Sbjct: 444 DTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFF 503

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
             +     +P+  TY I+++G+  +G +++A++L 
Sbjct: 504 AYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 240/505 (47%), Gaps = 29/505 (5%)

Query: 59  RMHPSPPPVSS--FNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIG 110
           R  P PP  S    N  L  L +    D  L      + +G  P +   NILI   C  G
Sbjct: 51  RTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADG 110

Query: 111 RVSLGFIAFGRILRSCFTPNAA--TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           RV+       R++ +   P+A   T+N+++ G +  +  ++AA        F   P+  T
Sbjct: 111 RVADA----ERVVEA-LGPSATIITYNTMVNG-YCRAGNIDAARRMIDSVPFA--PDTFT 162

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN LI  LC  G  + AL +F++M +        C P+ VTYS ++D  CKE    +A  
Sbjct: 163 YNPLIRALCVRGCVLDALAVFDDMLHRG------CSPSVVTYSILLDATCKESGYKQAVV 216

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L  +M+ +   PD+VTYN LI+ +C   D  EA ++   +   G +P  VT+  ++  LC
Sbjct: 217 LLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLC 276

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
            + + +EA +LL  M      P+  T+N ++   C  G + RA ++   M   GC  D +
Sbjct: 277 SSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDII 336

Query: 349 SYNILINGYCKNKEVEEALSLYRE----MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
           +Y+ +++G CK + V+EA+ L +E    MVSK   P  VT+NT+   L +    + A+K+
Sbjct: 337 TYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKV 396

Query: 405 FDEMQRDGVAADTRTYTTFIDG-LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
            DEM   G   D  TY   +DG LCK+    EA++L   +       D   Y  L  GL 
Sbjct: 397 VDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLS 456

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +   ++ A  +F  +    L P+ + YN ++ GLC   + D A D F  M  N   PD  
Sbjct: 457 REDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDES 516

Query: 524 TFDMLIHGFIRINEPSKVNELLHKM 548
           T+ +L+ G        +  ELL  +
Sbjct: 517 TYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 208/441 (47%), Gaps = 17/441 (3%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N  ++GL     +  A  L   +   G +P VI  N LI  LC  G    A  + E +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                        +TY+T+++G C+ G +D A+ +   +      PD  TYN LI  LC 
Sbjct: 125 ---------SATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCV 172

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                +A  +F +M+ +G  PSVVT+++++D  CK     +A  LLD M  +G  P+  T
Sbjct: 173 RGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVT 232

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           YN L++  C  G +  A ++  S+ S GCK D V+Y  ++   C ++  EEA  L  +M 
Sbjct: 233 YNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMF 292

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           S    P  VT+N +   L +   V  A K+  +M   G   D  TY++ +DGLCK   + 
Sbjct: 293 SNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVD 352

Query: 435 EAVELFRTLRI----LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           EA++L + L        C  D   +N +I  LC+ G    A ++   +     +P++ TY
Sbjct: 353 EAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTY 412

Query: 491 NIMIQG-LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           N ++ G LC   + ++A DL   M  N   PD  T+  L  G  R +E  +   +  +++
Sbjct: 413 NCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQ 472

Query: 550 EKKVMPDASIVSIVVDLLVKN 570
              + PD  + + ++  L K 
Sbjct: 473 AMGLSPDKMLYNAILLGLCKK 493



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 188/368 (51%), Gaps = 18/368 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  +FD ML    SP  V +++ILL +  K   Y         + + G  P++ TYN+L
Sbjct: 178 DALAVFDDMLHRGCSPS-VVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVL 236

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           IN  C  G V         +      P+A T+  ++K L +  R  EA  L TK+ +  C
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC 296

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+ +T+N +I  LC+ G    A  +  +M+         C P+ +TYS+I+DGLCKE  
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHG------CTPDIITYSSIMDGLCKERR 350

Query: 223 VDKA----KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           VD+A    K L  +M  +N  PD VT+N++I  LC    ++ A ++  EM + G  P + 
Sbjct: 351 VDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDIT 410

Query: 279 TFNVIMDE-LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           T+N I+D  LCK+ K +EA  LL+LMV  G+ P+  TY +L  G     ++ RA  +F  
Sbjct: 411 TYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRR 470

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +++MG   D + YN ++ G CK    + A+  +  MVS G  P   TY  L  G+     
Sbjct: 471 VQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGF 530

Query: 398 VEHALKLF 405
           +E A +L 
Sbjct: 531 LEEAKELL 538



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 6/221 (2%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N  + G  +  E++ AL L   +   G  P V+  N L   L    +V  A ++ + +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL-- 122

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G +A   TY T ++G C+ G I  A  +  ++       D   YN LI  LC  G +  
Sbjct: 123 -GPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFAP---DTFTYNPLIRALCVRGCVLD 178

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  +F  + H    P+VVTY+I++   C +    +A  L  +M      PD++T+++LI+
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
                 +  +  ++L+ +      PDA   + V+  L  +E
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSE 279


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 265/558 (47%), Gaps = 51/558 (9%)

Query: 52  CIFD--YMLRMHPSPPPVSSFNILLASLAK----NKHYDT-RLNATGLFPNLYTYNILIN 104
           C FD   M       P + + N+LL+SL K    +K Y+   L   G+ P+++T+   IN
Sbjct: 204 CAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQGVAPDVFTFTTAIN 263

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
            FCK GRV      F ++      PN  T+N++I GL    R  EA     ++      P
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNP 323

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI-GVVCKPNTVTYSTIIDGLCKEGFV 223
           +V+TY  LI+GL       + L +FEE      E+  +   PN V ++ +IDG C++G +
Sbjct: 324 SVVTYGVLISGL-------MKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDM 376

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ--------- 274
            +A  +  +M  + + P+ VT+N+L+ G C +N   +A+++ + ++  G+          
Sbjct: 377 GEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYV 436

Query: 275 -----------------PSVVTFNVIMDE---------LCKNRKMDEASRL-LDLMVQRG 307
                              +++ N+ + +         LCK     EA  L   L   +G
Sbjct: 437 IHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKG 496

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +  N  T N L+ G C  G +    E+   M   G   D +SYN LI G CK  ++EEA 
Sbjct: 497 LAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAF 556

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L  EMV +  +P   TYN L  GL ++ +++   +L  E +  G   +  TY   ++G 
Sbjct: 557 KLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGY 616

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK   I +AV+ F+ L   K EL    YN LI   C+ G +  A++L  ++    ++P  
Sbjct: 617 CKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTC 676

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            TY+ +I G+C  G++D+A+++F +M      P+V  +  LI G  ++ +   V  +L +
Sbjct: 677 ATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLE 736

Query: 548 MKEKKVMPDASIVSIVVD 565
           M    + P+    +I++D
Sbjct: 737 MSSNGIRPNKITYTIMID 754



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 6/300 (2%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  T N+L+ GL     + E   +  ++   G   + I+YNTLI G C+ G    A  L 
Sbjct: 500 NTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLK 559

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           EEM     +      P+T TY+ ++ GL   G +D    L  + K+    P+V TY  L+
Sbjct: 560 EEMVQQEFQ------PDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLL 613

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C A+   +A + F  +  + V+ S V +N+++   C+   + EA +L D M  RG+ 
Sbjct: 614 EGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGIL 673

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P   TY++L+ G C +G+++ A+E+F  M + G   +   Y  LI G+CK  +++   S+
Sbjct: 674 PTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSI 733

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EM S GI+P  +TY  +  G  ++  ++ A +L +EM R+G+A DT TY     G CK
Sbjct: 734 LLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCK 793



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 1/219 (0%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N+L++   K  E+ ++  ++ ++  +G+ P V T+ T      +  +V  A+ LF +M+ 
Sbjct: 225 NLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEG 283

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            GV  +  TY   IDGL K+G   EA+     +   K    +  Y  LI GL K    + 
Sbjct: 284 LGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEE 343

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A E+   +      PN V +N +I G C  G M +A  +  +M      P+ +TF+ L+ 
Sbjct: 344 ANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQ 403

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           GF R N+  +  ++L  +    +  +  + S V+  L++
Sbjct: 404 GFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLME 442



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 1/121 (0%)

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           ++  N L+  L K+  L  ++E+F     GV  P+V T+   I   C  G++  A DLF 
Sbjct: 221 LKTCNLLLSSLVKANELHKSYEVFDLACQGV-APDVFTFTTAINAFCKGGRVGDAVDLFC 279

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            ME     P+V+T++ +I G  +     +      +M   KV P      +++  L+K E
Sbjct: 280 KMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLE 339

Query: 572 I 572
           +
Sbjct: 340 M 340


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 200/385 (51%), Gaps = 13/385 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A   F+ ML M P PPP   FN +L+SL KNK Y T      +    G+ P+L T +IL
Sbjct: 44  DAVASFNRMLLMRP-PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 102

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           INCFC +  ++  F  F  IL+  + PNA T N+LIKGL     I  A     K+ A G 
Sbjct: 103 INCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGF 162

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + + ++Y TLINGLC+ G T     L  ++       G   KP+ V Y+TII  LCK   
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLE------GHSVKPDLVMYTTIIHCLCKNKL 216

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +  A  L+ +M  + I+P+V TY +LIHG C   +  EA  L  EM  + + P V TFN+
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D L K  K+DEA  L + M  + + PN  TY +L+DG C    + RA  L   M+  G
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 336

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + +  SY IL++  CK   +E A   ++ ++ KG    V TYN +  GL +       +
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 396

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGL 427
            L  +M+  G   +  T+ T I  L
Sbjct: 397 DLKSKMEGKGCMPNAITFKTIICAL 421



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 202/396 (51%), Gaps = 6/396 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P    FN+++  L    R     +LF + +  G  P++ T + LIN  C
Sbjct: 48  SFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFC 107

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
              H   A ++F  +            PN +T +T+I GLC  G + +A     ++  + 
Sbjct: 108 HLTHITFAFSVFANILKRGYH------PNAITLNTLIKGLCFCGEIKRALHFHDKVVAQG 161

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
              D V+Y +LI+GLC A +     RL  ++    V+P +V +  I+  LCKN+ + +A 
Sbjct: 162 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDAC 221

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M+ +G+ PN  TY TL+ GFC+MG +  A  L   M+      D  ++NILI+  
Sbjct: 222 DLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 281

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K  +++EA+SL+ EM  K + P +VTY +L  GL + H +E A+ L  +M+  G+  + 
Sbjct: 282 AKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNV 341

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +YT  +D LCK G +  A + F+ L +    L+++ YN +I+GLCK+G      +L   
Sbjct: 342 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 401

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           +     +PN +T+  +I  L    + DKA     +M
Sbjct: 402 MEGKGCMPNAITFKTIICALLEKDENDKAEKFLREM 437



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 184/368 (50%), Gaps = 1/368 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P T  ++ I+  L K        +LF Q +   I PD+ T + LI+  CH      A  +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  ++ +G  P+ +T N ++  LC   ++  A    D +V +G + +  +Y TL++G C 
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+      L   +E    K D V Y  +I+  CKNK + +A  LY EM+ KGI P V T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  G   +  ++ A  L +EM+   +  D  T+   ID L K G I EA+ LF  ++
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 +I  Y  LIDGLCK+  L+ A  L   +    + PNV +Y I++  LC  G+++
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIV 563
            A+  F  +       +V T++++I+G  +      V +L  KM+ K  MP+A +  +I+
Sbjct: 359 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTII 418

Query: 564 VDLLVKNE 571
             LL K+E
Sbjct: 419 CALLEKDE 426



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 196/400 (49%), Gaps = 6/400 (1%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A A F ++      P    +N +++ L +       ++LF++    NG       P+  
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNG-----ITPDLC 97

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T S +I+  C    +  A ++F  +     +P+ +T N+LI GLC   +   A     ++
Sbjct: 98  TLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKV 157

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           + QG Q   V++  +++ LCK  +    +RLL  +    V+P+   Y T++   C    +
Sbjct: 158 VAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLL 217

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A +L+  M   G   +  +Y  LI+G+C    ++EA SL  EM  K I P V T+N L
Sbjct: 218 GDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNIL 277

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +  +++ A+ LF+EM+   +  +  TYT+ IDGLCKN ++  A+ L + ++    
Sbjct: 278 IDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 337

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + ++ +Y  L+D LCK GRL+ A + F  L       NV TYN+MI GLC  G      D
Sbjct: 338 QPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMD 397

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           L   ME     P+ ITF  +I   +  +E  K  + L +M
Sbjct: 398 LKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREM 437



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 153/305 (50%)

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  M+     P    FN I+  L KN++      L       G+ P+ CT + L++ FC 
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +  I  A  +F ++   G   + ++ N LI G C   E++ AL  + ++V++G +   V+
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  GL +  + +   +L  +++   V  D   YTT I  LCKN  + +A +L+  + 
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMI 228

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +     ++  Y  LI G C  G LK A+ L   +    + P+V T+NI+I  L  +G++D
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  LF +M+     P+++T+  LI G  + +   +   L  KMKE+ + P+    +I++
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILL 348

Query: 565 DLLVK 569
           D L K
Sbjct: 349 DALCK 353



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 75/172 (43%)

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A+  F+ M        T  +   +  L KN      + LF+         D+   + LI+
Sbjct: 45  AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
             C    + FA+ +F ++      PN +T N +I+GLC  G++ +A      +       
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           D +++  LI+G  +  E   V  LL K++   V PD  + + ++  L KN++
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKL 216


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 242/499 (48%), Gaps = 18/499 (3%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL-----G 115
           H    P S  N+LL + A  + + T L    L+  + + ++ I+       +S       
Sbjct: 42  HLDGAPSSLPNLLLTASAAVRPHATSLR---LYSRMKSLSLPISTASLHPLLSALPSAPA 98

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F  F  + R        TFN +++ L +  +   A  L  ++      PN +TYNT+I G
Sbjct: 99  FALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAG 154

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C  G    AL++  EM    G       PN  TY T+I G CK G VD+A  +F +M  
Sbjct: 155 FCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 209

Query: 236 EN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           +  + P+ V YN+LI G C     + A      M+++GV  +V T+N+++  L  + +  
Sbjct: 210 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 269

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L++ M  +G+ P+  TYN L++G C  G + +A E+F +M   G +   V+Y  LI
Sbjct: 270 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALI 329

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
               K  +V+E   L+ E V +GI+P +V YN L         ++ A ++  EM++  +A
Sbjct: 330 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 389

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY T + GLC  G + EA +L   +     + D+  YN LI G    G +K A  +
Sbjct: 390 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 449

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              + +    P ++TYN +IQGLC +GQ D A ++  +M EN   PD  T+  LI G   
Sbjct: 450 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 509

Query: 535 INEPSKVNELLHKMKEKKV 553
            +E +  +E L      KV
Sbjct: 510 EDERAIDDERLAAADAAKV 528



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 235/508 (46%), Gaps = 25/508 (4%)

Query: 67  VSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           V S +  L+ LA   H D    A    PNL     L+     +   +     + R+    
Sbjct: 27  VLSADKALSPLAVLPHLD---GAPSSLPNL-----LLTASAAVRPHATSLRLYSRMKSLS 78

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
              + A+ + L+  L +      A ALF  +          T+N ++  LC  G    AL
Sbjct: 79  LPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 134

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-INPDVVTY 245
            L  +M           +PN VTY+T+I G C  G V  A  +  +M++   I P+  TY
Sbjct: 135 ELLRQMP----------RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 184

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            ++I G C     +EA ++F EM+ +G V+P  V +N ++   C   K+D A    D MV
Sbjct: 185 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 244

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RGV     TYN L+    + G+   A EL   M   G   D  +YNILING+CK   V+
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 304

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +AL ++  M  +G++ TVVTY  L   L +  QV+   KLFDE  R G+  D   Y   I
Sbjct: 305 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +    +G I  A E+   +   +   D   YN L+ GLC  GR+  A +L   +    + 
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++VTYN +I G    G +  A  +  +M      P ++T++ LI G  +  +      +
Sbjct: 425 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 484

Query: 545 LHKMKEKKVMPDASI-VSIVVDLLVKNE 571
           + +M E  + PD S  +S++  L  ++E
Sbjct: 485 VKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 196/379 (51%), Gaps = 15/379 (3%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKI 109
           +LR  P P  V+ +N ++A           L+         G+ PN YTY  +I+ +CK+
Sbjct: 136 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 110 GRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           GRV      F  +L +    P A  +N+LI G   + ++  A     ++   G    V T
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++ L   G    A  L EEM  G G       P+  TY+ +I+G CKEG V KA  
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMG-GKG-----LAPDVFTYNILINGHCKEGNVKKALE 308

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F  M    +   VVTY +LI+ L       E  +LF E + +G++P +V +N +++   
Sbjct: 309 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 368

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
            +  +D A  ++  M ++ + P+  TYNTLM G CL+G+++ A +L   M   G + D V
Sbjct: 369 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 428

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LI+GY    +V++AL +  EM++KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 429 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 488

Query: 409 QRDGVAADTRTYTTFIDGL 427
             +G+  D  TY + I+GL
Sbjct: 489 VENGITPDDSTYISLIEGL 507



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 12/258 (4%)

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L+  M+S+       S + L++          A +L+ +M    +     T+N +   L
Sbjct: 69  RLYSRMKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHL 124

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
               +   AL+L  +M R        TY T I G C  G +  A+++ R +R        
Sbjct: 125 CSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 180

Query: 453 Q-AYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           Q  Y  +I G CK GR+  A ++F   L  G + P  V YN +I G C+ G++D A  L+
Sbjct: 181 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LY 239

Query: 511 LD-MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            D M E   A  V T+++L+H        ++  EL+ +M  K + PD    +I+++   K
Sbjct: 240 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 299

Query: 570 NEISLKSLPSFLVQERQG 587
                K+L  F    R+G
Sbjct: 300 EGNVKKALEIFENMSRRG 317



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 7/135 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           + AF I   M +   +P  V+ +N L+  L      D        +   G+ P+L TYN 
Sbjct: 374 DRAFEIMGEMEKKRIAPDDVT-YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ +   G V         ++   F P   T+N+LI+GL    +  +A  +  ++   G
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 162 CEPNVITYNTLINGL 176
             P+  TY +LI GL
Sbjct: 493 ITPDDSTYISLIEGL 507


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 215/414 (51%), Gaps = 7/414 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           ++A G++P+  TY  +I  +C+ G V         ++   F  + AT   +I     +S 
Sbjct: 235 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 294

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A   F K+   G  PN+I Y+++I+GLC+ G    A  L EEM   NG      KPN
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK-NG-----WKPN 348

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             T++++I GLCK+G+ ++A  LFL++ + +N  P+V TY ++I G C     + A+ LF
Sbjct: 349 VYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF 408

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M +QG+ P+  T+  ++D  CK     +A  L++LM   G  PN CTYN+++DG C  
Sbjct: 409 ERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 468

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+   A +L  +      + D V+Y ILI+  CK  ++ +AL    +M   G +P +  Y
Sbjct: 469 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 528

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            TL       + ++ + KLFDE+ + G+A    TYT+ I G C+   +  AV+ F+ +  
Sbjct: 529 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD 588

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
             C  D  +Y  LI GLCK  RL  A +L+ ++    L P  VT   +    C 
Sbjct: 589 HGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCK 642



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 204/415 (49%), Gaps = 8/415 (1%)

Query: 143 AESRIMEAAA-LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
           AE R++E A  +F ++ A G  P+  TY  +I G CR G+ + A     EM     E G 
Sbjct: 220 AEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM----ERGF 275

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           V    T+T   II   C++  V++A   F ++    ++P+++ Y+S+I GLC      +A
Sbjct: 276 VVDNATLTL--IITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQA 333

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMD 320
             L  EM+  G +P+V T   ++  LCK    + A RL L L+     +PN  TY  ++ 
Sbjct: 334 FELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMIS 393

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+C   K++RAE LF  M+  G   +  +Y  LI+G+CK     +A  L   M ++G  P
Sbjct: 394 GYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFP 453

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
              TYN++  GL +  + E A KL +   ++ + AD  TYT  I   CK   + +A+   
Sbjct: 454 NTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFL 513

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             +  +  + DI  Y  LI   C+   +K + +LF  +    L P   TY  MI G C +
Sbjct: 514 NKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE 573

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            ++  A   F  M ++  APD I++  LI G  + +   +  +L   M +K + P
Sbjct: 574 KKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 193/394 (48%), Gaps = 10/394 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   GL PNL  Y+ +I+  CK G V   F     ++++ + PN  T  SLI GL  + 
Sbjct: 304 KVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKG 363

Query: 146 RIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
               A  LF KL ++   +PNV TY  +I+G C+      A  LFE M     E G+V  
Sbjct: 364 WTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMK----EQGLV-- 417

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PNT TY+T+IDG CK G   KA  L   M +E   P+  TYNS++ GLC      EA +L
Sbjct: 418 PNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKL 477

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
                   ++   VT+ +++ E CK   M++A   L+ M + G +P+   Y TL+  FC 
Sbjct: 478 LNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCR 537

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
              +  +E+LF  +  +G      +Y  +I GYC+ K+V  A+  +++M   G  P  ++
Sbjct: 538 QNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSIS 597

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L  GL +  +++ A +L+D M   G++    T  T     CK      A+ +   L 
Sbjct: 598 YGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVI---LE 654

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            L  +L I+  + LI  LC   ++  A   F  L
Sbjct: 655 RLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKL 688



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 1/345 (0%)

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G + +A  + L M+++ +       N +I           A  +F EM  +GV P   T+
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             I+   C+N  + EA R +  M++RG   +  T   ++  FC    +NRA   F  +  
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
           MG   + ++Y+ +I+G CK   V++A  L  EMV  G KP V T+ +L  GL +    E 
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 367

Query: 401 ALKLFDEMQR-DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
           A +LF ++ R D    +  TYT  I G CK   +  A  LF  ++      +   Y  LI
Sbjct: 368 AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 427

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DG CK+G    A+EL   + +    PN  TYN ++ GLC  G+ ++A  L     +N   
Sbjct: 428 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            D +T+ +LI    +  + ++    L+KM +    PD  + + ++
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLI 532



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 1/279 (0%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+ EA  ++  M  +G+       N ++     M  +  A  +F  M + G   D  +Y 
Sbjct: 189 KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 248

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I GYC+N  V EA     EM+ +G      T   +     E   V  A+  F ++ + 
Sbjct: 249 YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 308

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G++ +   Y++ I GLCK G + +A EL   +     + ++  +  LI GLCK G  + A
Sbjct: 309 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 368

Query: 472 WELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           + LF  L       PNV TY  MI G C + ++ +A  LF  M+E    P+  T+  LI 
Sbjct: 369 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 428

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           G  +    SK  EL+  M  +   P+    + +VD L K
Sbjct: 429 GHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCK 467



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 26/185 (14%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G  P+++ Y  LI  FC+   +      F  +++    P   T+ S+I G   E 
Sbjct: 515 KMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREK 574

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---GEIGVV 202
           ++  A   F K+   GC P+ I+Y  LI+GLC+      A  L++ M +      E+  V
Sbjct: 575 KVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRV 634

Query: 203 ------CKPNTV-----------------TYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                 CK                     T  T+I  LC E  V  A   F ++ D+ +N
Sbjct: 635 TLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVN 694

Query: 240 PDVVT 244
            D VT
Sbjct: 695 VDRVT 699


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 164/563 (29%), Positives = 275/563 (48%), Gaps = 35/563 (6%)

Query: 59  RMHPSPPPVSSFNI---LLASLAKNKHYDTR-------LNATGLFPNLYTYNILINCFCK 108
           ++  SPP + SF +      SL +N  Y +        LN   L   +++       F  
Sbjct: 57  KIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKA 116

Query: 109 IGRVSLGFIAFGRILRSCF----TPNAATFNSLIK-----GLHAESRIMEAAALFTKLKA 159
            G+  L   A     R  F     P   +FNS++      G H   R +E        K 
Sbjct: 117 YGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFH--DRALEFYNHVVGAKD 174

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
               PNV+++N +I  +C+ G    A+ LF EM          C P+  TY T++DGLCK
Sbjct: 175 MNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRK------CVPDAYTYCTLMDGLCK 228

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              +D+A +L  +M+ E   P   T+N LI+GLC   D+    +L   M  +G  P+ VT
Sbjct: 229 VDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVT 288

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N ++  LC   K+D+A  LLD MV     PN  TY T+++G    G+      +   ME
Sbjct: 289 YNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLME 348

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G   ++  Y++L++G  K  + EEA+ L++E + KG K   V Y+ L  GL    + +
Sbjct: 349 ERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPD 408

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A+K+  EM   G A +  T+++ + G  + G   +A+E+++ +  + C  +   Y+ LI
Sbjct: 409 EAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLI 468

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM--EENA 517
            GLCK G++  A  ++  +      P+VV Y+ MIQGLC+ G +++A  L+ +M   E  
Sbjct: 469 HGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPD 528

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN----EIS 573
           + PDVIT+++L +   + +  S+  +LL+ M ++   PD    +I + +L +     +  
Sbjct: 529 SQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDG 588

Query: 574 LKSLPSFLVQ--ERQGEVGESNV 594
            K L   +V+  +RQ  +G S +
Sbjct: 589 AKFLDELVVRLLKRQRNLGASKI 611



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 233/457 (50%), Gaps = 54/457 (11%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL---------NATGLFPNLY 97
           PN+A  +F  M       P V SFN +L  + +   +D  L             + PN+ 
Sbjct: 123 PNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVL 182

Query: 98  TYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           ++N++I   CK+G V      F  + +R C  P+A T+ +L+ GL    RI EA +L  +
Sbjct: 183 SFNLIIKSMCKLGLVDNAIELFREMPVRKC-VPDAYTYCTLMDGLCKVDRIDEAVSLLDE 241

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++  GC P+  T+N LINGLC+ G       L + M          C PN VTY+T+I G
Sbjct: 242 MQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKG------CVPNEVTYNTLIHG 295

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH--------------------AN 256
           LC +G +DKA +L  +M      P+ VTY ++I+GL                       N
Sbjct: 296 LCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVN 355

Query: 257 DW---------------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           ++                EA RLF E MD+G + + V ++ ++D LC++RK DEA ++L 
Sbjct: 356 EYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILS 415

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M  +G  PNA T+++LM GF  +G  ++A E++  M  + C  ++V Y++LI+G CK+ 
Sbjct: 416 EMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDG 475

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRT 419
           +V EA+ ++ +M++ G +P VV Y+++  GL +   VE ALKL++EM         D  T
Sbjct: 476 KVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVIT 535

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           Y    + LCK   I  AV+L  ++    C+ D+   N
Sbjct: 536 YNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCN 572



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 29/258 (11%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N   Y+ L++  C+  +          +      PNA TF+SL+KG        +A  ++
Sbjct: 390 NTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVW 449

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +    C  N + Y+ LI+GLC+ G  M A+ ++ +M      +   C+P+ V YS++I
Sbjct: 450 KDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKM------LATGCRPDVVAYSSMI 503

Query: 215 DGLCKEGFVDKAKALFLQMK--DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            GLC  G V++A  L+ +M   + +  PDV+TYN L + LC  +  + A  L   M+D+G
Sbjct: 504 QGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRG 563

Query: 273 VQPSVVTFNVIM-----------------DELC----KNRKMDEASRLLDLMVQRGVRPN 311
             P +VT N+ +                 DEL     K ++   AS+++++M+Q+ + P 
Sbjct: 564 CDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPK 623

Query: 312 ACTYNTLMDGFCLMGKIN 329
           A T+  ++   C   KI 
Sbjct: 624 ASTWARVVHELCQPKKIQ 641


>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 260/541 (48%), Gaps = 17/541 (3%)

Query: 23  SNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH 82
           +++++LL H+   ++R    ++I  +E   ++  M R+ P P   S+FNILL  +    +
Sbjct: 79  NDYNALLYHYLKSSSR----HLIVLDELVQVYFGMKRLGPYPN-ASTFNILLDGMTSTGN 133

Query: 83  ------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
                 +   +  +G  P+  +   ++  +  +G +      F  +LR  + P   T N 
Sbjct: 134 LRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNL 193

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           LI  L       EA  +F  L   GC     +YN ++  LC+ G +  AL L   +    
Sbjct: 194 LISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLK--- 250

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            ++G V   N  +Y+ ++ G  KEG  ++A  +  +MK +   P+V+TY  ++  LC   
Sbjct: 251 -KMGAV--HNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEG 307

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
              +A  +  +M  +G  P +VT+NVI+ EL    +  E   LL ++ Q+ + P++ TY 
Sbjct: 308 RIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYA 367

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L  G    G++  A +L   + S GC  D   YNI  +  C+  +  EALSL + MV K
Sbjct: 368 ALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEK 427

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G+ PT V+YNT+  G    + ++ AL+LFD  +    + D  ++ T +   CK G     
Sbjct: 428 GLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMI 487

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
             +   +     +L++ +  CLI   C  G++    EL  S+    L P VVT+N+++  
Sbjct: 488 RRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDK 547

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LC +G +  A  +F +       P+  ++++LIH  IR    S V +LL  M   ++ PD
Sbjct: 548 LCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPD 607

Query: 557 A 557
           A
Sbjct: 608 A 608



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 255/556 (45%), Gaps = 17/556 (3%)

Query: 19  SAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMH--PSPPPVSSFNILL-- 74
           S F  +F+SLL   +        + + +  ++  +F++MLR+   P+ P ++    +L  
Sbjct: 147 SGFLPSFTSLLKILKKW------LGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSK 200

Query: 75  ASLAKNKHYDTR-LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           A +A+  H+  R L   G     ++YN ++   CK G+          + +     NAA+
Sbjct: 201 AGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAAS 260

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           + +L+ G   E    EA  +  ++K  GC+PNVITY  ++  LC  G    AL++  +M 
Sbjct: 261 YTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKM- 319

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
              G+ G  C P+ VTY+ I+  L  +    +   L   +  + I+PD  TY +L  GL 
Sbjct: 320 ---GKEG--CDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLL 374

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                  A +L + ++  G    V  +N+    LC+  K  EA  LL  MV++G+ P   
Sbjct: 375 KRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNV 434

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +YNT+++GFC    I+ A +LF   E      D VS+N +++  CK         +   M
Sbjct: 435 SYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRM 494

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             +G+K  VV+   L      I ++   L+L + M R+G+     T+   +D LCKNG +
Sbjct: 495 EYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLL 554

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A  +FR  R      +  +YN LI    + G      +L   +    L P+ VTY   
Sbjct: 555 GTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSF 614

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I+GLC +G++  A  L   M E+   P V  ++ ++    +  +   +  LL  M     
Sbjct: 615 IKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGC 674

Query: 554 MPDASIVSIVVDLLVK 569
            P+A  + I+   + K
Sbjct: 675 EPNAVSIEILKQAMSK 690



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 21/432 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNIL 102
           EAFC+ D M ++    P V ++ +++  L         L+  G        P++ TYN++
Sbjct: 276 EAFCMLDEM-KIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVI 334

Query: 103 INCFCKIGRVSLGFIAFGRILRSC----FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +       R    ++  G +L+       +P++ T+ +L  GL    ++  A  L   + 
Sbjct: 335 LRELFHQDR----YVEIGELLQVIDQKEISPDSFTYAALTGGLLKRGQVRVANKLLLYVI 390

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           + GC  +V  YN   + LCR   +  AL+L + M     E G+V  P  V+Y+TI++G C
Sbjct: 391 SAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMV----EKGLV--PTNVSYNTILNGFC 444

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           +E  +D+A  LF   +  N +PDVV++N+++   C   + +  +R+   M  +GV+ +VV
Sbjct: 445 RENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVV 504

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           +   ++   C   K+ E   LL+ M++ G+ P   T+N L+D  C  G +  A  +F   
Sbjct: 505 SSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREF 564

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
            + G   +  SYNILI+   +         L R+M S  +KP  VTY +   GL +  ++
Sbjct: 565 RNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKI 624

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A++L D+M   G+      Y T +  + + G   + V L + + +  CE +  +   L
Sbjct: 625 SVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEIL 684

Query: 459 IDGLCKSGRLKF 470
              + K    +F
Sbjct: 685 KQAMSKCWMKRF 696



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 197/436 (45%), Gaps = 11/436 (2%)

Query: 123 LRSCFTPNAATFNSLI-KGLHAESRIM----EAAALFTKLKAFGCEPNVITYNTLINGLC 177
           L S   P+   +N+L+   L + SR +    E   ++  +K  G  PN  T+N L++G+ 
Sbjct: 70  LNSIRYPSVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMT 129

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            TG+   A    EEM       G +  P+  +   I+      G +  + ++F  M    
Sbjct: 130 STGNLRAAFFFAEEMWRS----GFL--PSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLE 183

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P   T N LI  L  A    EA  +F  ++ +G      ++N I+  LCK  +   A 
Sbjct: 184 YFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTAL 243

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL  + + G   NA +Y  L+ GF   G    A  +   M+  GCK + ++Y +++   
Sbjct: 244 ALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFL 303

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C    + +AL +  +M  +G  P +VTYN +   LF   +     +L   + +  ++ D+
Sbjct: 304 CDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDS 363

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY     GL K G +  A +L   +    C +D+  YN     LC+  +   A  L  S
Sbjct: 364 FTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQS 423

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    LVP  V+YN ++ G C +  +D+A  LF   E    +PDV++F+ ++    +   
Sbjct: 424 MVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGN 483

Query: 538 PSKVNELLHKMKEKKV 553
            S +  +L++M+ + V
Sbjct: 484 SSMIRRVLYRMEYEGV 499



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/343 (20%), Positives = 154/343 (44%), Gaps = 5/343 (1%)

Query: 240 PDVVTYNSLIHGLCHAND-----WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           P V  YN+L++    ++       +E  +++  M   G  P+  TFN+++D +     + 
Sbjct: 76  PSVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLR 135

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A    + M + G  P+  +   ++  +  +G +  +  +F  M  +     + + N+LI
Sbjct: 136 AAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLI 195

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +   K     EA  ++R ++ KG      +YN +   L +  Q   AL L   +++ G  
Sbjct: 196 SMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAV 255

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  +YT  + G  K G   EA  +   ++I  C+ ++  Y  ++  LC  GR+  A ++
Sbjct: 256 HNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDI 315

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              +      P++VTYN++++ L +  +  +  +L   +++   +PD  T+  L  G ++
Sbjct: 316 LGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLK 375

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             +    N+LL  +       D ++ +I    L +   S ++L
Sbjct: 376 RGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEAL 418


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 250/535 (46%), Gaps = 66/535 (12%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   +FN+L+ +L  +   D        +   G  PN +T+ IL+  +CK G    G   
Sbjct: 145 PETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      PN   +N+++     E R  ++  L  K++  G  P+++T+N+ I+ LC+
Sbjct: 205 LNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCK 264

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G  + A  +F +M     E   + +PN++TY+ ++ G CK G ++ AK LF  +++ + 
Sbjct: 265 EGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
              + +YN  + GL     + EA+ +  +M+D+G+ PS+ ++N++MD LCK   + +A  
Sbjct: 323 LVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCL---------------------------------- 324
           ++ LM + GV P+A TY  L+ G+C                                   
Sbjct: 383 IVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442

Query: 325 -MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK---- 379
            MG+I+ AEEL   M   G   D V+ NI+++G C + E+++A+ + + M   G      
Sbjct: 443 NMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502

Query: 380 -------------------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
                              P ++TY+TL  GL +  +   A  LF EM  + +  D+  Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAY 562

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
             FI   CK G I  A  + + +    C   ++ YN LI GL    ++     L   +  
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMRE 622

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             + PN+ TYN  IQ LC  G+++ A +L  +M +   AP+V +F  LI  F ++
Sbjct: 623 KGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKV 677



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 252/547 (46%), Gaps = 58/547 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF-------------PNLYTYNILINCFCKIGR 111
           P + +FN  +++L K       L+A+ +F             PN  TYN+++  FCK+G 
Sbjct: 250 PDIVTFNSRISALCKEGKV---LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +      F  I  +    +  ++N  ++GL    + +EA  +  ++   G  P++ +YN 
Sbjct: 307 LEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNI 366

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L++GLC+ G    A  +   M   NG       P+ VTY  ++ G C  G VD AK+L  
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKR-NG-----VSPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M   N  P+  T N L+H L +    +EA+ L  +M ++G     VT N+I+D LC + 
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480

Query: 292 KMDEASRLL-----------------------DLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           ++D+A  ++                       D +++    P+  TY+TL++G C  G+ 
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ LF  M     + D ++YNI I+ +CK  ++  A  + ++M  KG   ++ TYN+L
Sbjct: 541 AEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
            LGL   +Q+     L DEM+  G++ +  TY T I  LC+ G + +A  L   +     
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNI 660

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELF------CSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
             ++ ++  LI   CK      A E+F      C    G+       Y++M   L   GQ
Sbjct: 661 APNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL-------YSLMFNELLAAGQ 713

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           + KA +L   + +         +  L+    + +E    + +LHKM +K    D + +  
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMP 773

Query: 563 VVDLLVK 569
           V+D L K
Sbjct: 774 VIDGLGK 780



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 189/368 (51%), Gaps = 4/368 (1%)

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           KP    Y+ +++   +E  V+    L+  M    I+P+  T+N LI  LC ++  + A+ 
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           LF EM ++G +P+  TF +++   CK    D+   LL+ M   GV PN   YNT++  FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK---GI-K 379
             G+ + +E+L   M   G   D V++N  I+  CK  +V +A  ++ +M      G+ +
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  +TYN +  G  ++  +E A  LF+ ++ +      ++Y  ++ GL ++G  IEA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            + +        I +YN L+DGLCK G L  A  +   +    + P+ VTY  ++ G C+
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++D A+ L  +M  N   P+  T ++L+H    +   S+  ELL KM EK    D   
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 560 VSIVVDLL 567
            +I+VD L
Sbjct: 469 CNIIVDGL 476



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 197/431 (45%), Gaps = 26/431 (6%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S+NIL+  L K       K     +   G+ P+  TY  L++ +C +G+V      
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++R+   PNA T N L+  L    RI EA  L  K+   G   + +T N +++GLC 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 179 TGHTMIALNLFEEMAN---------GNGEIGVV--------CKPNTVTYSTIIDGLCKEG 221
           +G    A+ + + M           GN  IG+V        C P+ +TYST+++GLCK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
              +AK LF +M  E + PD + YN  IH  C     + A R+  +M  +G   S+ T+N
Sbjct: 539 RFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  L    ++ E   L+D M ++G+ PN CTYNT +   C  GK+  A  L   M   
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQK 658

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEH 400
               +  S+  LI  +CK  + + A  ++   VS  G K  +  Y+ +F  L    Q+  
Sbjct: 659 NIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLK 716

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A +L + +   G    T  Y   +  LCK   +  A  +   +       D  A   +ID
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVID 776

Query: 461 GLCKSGRLKFA 471
           GL K G  K A
Sbjct: 777 GLGKMGNKKEA 787



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 181/362 (50%), Gaps = 6/362 (1%)

Query: 212 TIIDGLCKEGFVDKA--KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +++    K   +DKA  +  F++ +     P +  YN L+              L+ +M+
Sbjct: 80  SVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMV 139

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+ P   TFN+++  LC +  +D A  L D M ++G +PN  T+  L+ G+C  G  +
Sbjct: 140 LCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +  EL  SMES G   + V YN +++ +C+    +++  L  +M  +G+ P +VT+N+  
Sbjct: 200 KGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRI 259

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTR----TYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L +  +V  A ++F +M+ D      R    TY   + G CK G + +A  LF ++R 
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
               + +Q+YN  + GL + G+   A  +   +    + P++ +YNI++ GLC  G +  
Sbjct: 320 NDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSD 379

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A+ +   M+ N  +PD +T+  L+HG+  + +      LL +M     +P+A   +I++ 
Sbjct: 380 AKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439

Query: 566 LL 567
            L
Sbjct: 440 SL 441



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 145/322 (45%), Gaps = 11/322 (3%)

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           W   KR+F    ++    S+     +   L + +  +E   L +L++   ++    +  +
Sbjct: 20  WRIFKRIFSSPSEESHGISLAATPTMACILVRAKMHEEIEELHNLILSSSIQKTKLS--S 77

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVS-----YNILINGYCKNKEVEEALSLYRE 372
           L+    +  K N  ++ F   + +  +  +       YN+L+    + + VE    LY++
Sbjct: 78  LLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKD 137

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           MV  GI P   T+N L   L +   V+ A +LFDEM   G   +  T+   + G CK G 
Sbjct: 138 MVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             + +EL  ++       +   YN ++   C+ GR   + +L   +    LVP++VT+N 
Sbjct: 198 TDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNS 257

Query: 493 MIQGLCNDGQMDKARDLFLDMEENA----AAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            I  LC +G++  A  +F DME +       P+ IT+++++ GF ++        L   +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 549 KEKKVMPDASIVSIVVDLLVKN 570
           +E   +      +I +  LV++
Sbjct: 318 RENDDLVSLQSYNIWLQGLVRH 339



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 13/284 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + +++ LL  L K   +         +    L P+   YNI I+ FCK G++S  F  
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRV 581

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +     +  T+NSLI GL  +++I E   L  +++  G  PN+ TYNT I  LC 
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCE 641

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A NL +EM   N        PN  ++  +I   CK    D A+ +F +      
Sbjct: 642 GGKVEDATNLLDEMMQKN------IAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSIC 694

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
                 Y+ + + L  A    +A  L   ++D+G +     +  ++  LCK  +++ AS 
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASG 754

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           +L  M+ +G   +      ++DG   MG    A      M  M 
Sbjct: 755 ILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMA 798


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 237/520 (45%), Gaps = 65/520 (12%)

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           S+  ++ +L K    D        L   GL P + TYN+L++  CK GRV   F   GR+
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
            +   TP+  TF  LI GL    R  E   +  +++  G  PN + YN LI   CR GH 
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK--------------- 227
             AL LF+EM      +    KP  VTY+ I   LCKEG +++A+               
Sbjct: 133 SQALRLFDEM------VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 228 -------ALFLQ--------------MKDENINPDVVTYNSLIHGLCHAND-------W- 258
                  A  LQ              M    + P+     + +  LC           W 
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 259 ---------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
                     EA ++   M+++G++   +T+N+++   CK+ KM+EA +L   M +RG +
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  T+NTL+  +C +GK+     L   M++ G + D VSY  +I+G+CK K++ +A   
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEY 366

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             E++ +G+KP V  YN L  G      +  A+   + M+ +G+     TY + +  +C 
Sbjct: 367 LTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH 426

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G + EA  +F   R    +L +  Y  +I G CK G++  A   F  +    + PN +T
Sbjct: 427 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 486

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
           Y  ++      G  ++A  LF +M  +   PD IT+  LI
Sbjct: 487 YTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 233/483 (48%), Gaps = 30/483 (6%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N Y+Y  +I   CK G+V  GF     + R+   P   T+N L+  L    R+ EA  L 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 155 TKLKAFGCEPNVITYNTLINGLCRT---GHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +++  G  P+V+T+  LINGL R    G   I L   E++            PN V Y+
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLG---------VSPNEVIYN 120

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I   C++G   +A  LF +M  + + P  VTYN +   LC   +   A+R+  +M+  
Sbjct: 121 ELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 180

Query: 272 GVQPSVVTFNVIMDELC-KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK--- 327
           G+      FN ++  L  + R+++    + + MV RG+RPN       M   C  GK   
Sbjct: 181 GMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQE 240

Query: 328 --------------INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
                         +  A ++  +M + G + D ++YNI+I G CK+ ++EEA+ L+ +M
Sbjct: 241 AVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDM 300

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             +G KP + T+NTL      + ++E    L D+M+ +G+  D  +Y T IDG CK   I
Sbjct: 301 TRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDI 360

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A E    L     + ++  YN LI G  ++G +  A +   ++    + P  VTY  +
Sbjct: 361 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 420

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +  +C+ G +++A+ +F    EN     VI + ++I G+ ++ +  +      +M+ + +
Sbjct: 421 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 480

Query: 554 MPD 556
            P+
Sbjct: 481 SPN 483



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 182/383 (47%), Gaps = 18/383 (4%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  +Y+ +I  LCK G VD    +  ++    + P VVTYN L+  LC +    EA RL 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   G+ PSVVTF ++++ L +  +  E   +L  M Q GV PN   YN L+   C  
Sbjct: 70  GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  ++A  LF  M     K   V+YN++    CK  E+E A  +  +M+S G+      +
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189

Query: 386 NTLFLGLFE-IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG------------- 431
           NT+   L +   ++E  + + +EM   G+  +    T  +  LCK G             
Sbjct: 190 NTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 249

Query: 432 ----YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
               Y+ EA ++ +T+     ELD   YN +I G CK  +++ A +L   +      P++
Sbjct: 250 NKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            T+N ++   CN G+M++   L   M+     PD++++  +I G  +  +  K  E L +
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 548 MKEKKVMPDASIVSIVVDLLVKN 570
           + ++ + P+  I + ++    +N
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRN 392



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 175/350 (50%), Gaps = 18/350 (5%)

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           +  N+  +  +Y ++I  LC A   +    +  E+   G+QP+VVT+NV+MD LCK+ ++
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           +EA RL   M Q G+ P+  T+  L++G     +      +   ME +G   ++V YN L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I  +C+     +AL L+ EMV K +KPT VTYN +   L +  ++E A ++ ++M   G+
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 414 AADTRTYTTFIDGLCKNGYIIEAV------ELFRTLR-----ILKCELDI-------QAY 455
                 + T +  L +    +E+V       + R +R     +  C  ++       +A 
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 242

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
                 L K   +K A ++  ++ +  +  + +TYNIMI+G C D +M++A  L  DM  
Sbjct: 243 GIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 302

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
               PD+ TF+ L+H +  + +  +   LL +MK + + PD      ++D
Sbjct: 303 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 352



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           VA +  +YT  I  LCK G +    E+   L     +  +  YN L+D LCKSGR++ A+
Sbjct: 7   VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            L   +  G + P+VVT+ I+I GL    +  +   +  +ME+   +P+ + ++ LI   
Sbjct: 67  RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            R    S+   L  +M  KK+ P A   +++   L K
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 163



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 85/206 (41%)

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           S+ +     +Y  +   L +  +V+   ++  E+ R G+     TY   +D LCK+G + 
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EA  L   +        +  +  LI+GL +  R      +   +    + PN V YN +I
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              C  G   +A  LF +M      P  +T++++     +  E  +   +L  M    + 
Sbjct: 124 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT 183

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSF 580
               + + VV  L++    L+S+ S 
Sbjct: 184 VHCGLFNTVVAWLLQRTRRLESVVSI 209


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 235/456 (51%), Gaps = 11/456 (2%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +IN + ++G        F RI      P    +N L+  + +E+R      +++ +K  G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EPNV TYN L+  LC+      A  L  EM+N        C+P+ V+Y+T+I  + K G
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKG------CEPDVVSYTTVISSMSKLG 233

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++A+ L ++ +     P+V  YN+LI+G C      E   L  +M+++G+ P+V+T++
Sbjct: 234 KVEEARELSIRFQ-----PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYS 288

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++  L     ++ A  +   M  RG  PN  T+ +LM G+ + G++  A  ++  M   
Sbjct: 289 TVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE 348

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + + V+YN LI+G C + ++ EA+S+  +M   G  P V TY  L  G  +   +  A
Sbjct: 349 GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGA 408

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +++++M  +G   +   YT+ ++ LC++    +A  L   +    C  +   +N  I G
Sbjct: 409 SEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKG 468

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC SGR++ A  LFC +      PN+ TYN ++ GL  + ++ +A +L  +MEE     +
Sbjct: 469 LCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELN 528

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           ++T++ +  GF  + +  +  +LL KM    V PDA
Sbjct: 529 LVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 249/511 (48%), Gaps = 28/511 (5%)

Query: 31  HFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------ 84
           H  D    E    +I P     I+  M R     P V ++NILL +L KN   D      
Sbjct: 154 HLLDAMLSENRFQMIEP-----IYSNMKR-DGKEPNVYTYNILLKALCKNNRVDGACKLL 207

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
             ++  G  P++ +Y  +I+   K+G+V        R L   F PN + +N+LI G   E
Sbjct: 208 VEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-----RELSIRFQPNVSVYNALINGFCRE 262

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVC 203
            ++ E   L  ++   G +PNVITY+T+I+ L   G+  +AL ++ +M   G       C
Sbjct: 263 YKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG-------C 315

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            PN  T+++++ G    G V +A  ++ +M +E   P+VV YN+LIHGLC      EA  
Sbjct: 316 SPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVS 375

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +  +M   G  P+V T+  ++D   K   +  AS + + M+  G  PN   Y ++++  C
Sbjct: 376 VSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLC 435

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
                ++A  L   M +  C  + V++N  I G C +  VE A++L+ +M   G  P + 
Sbjct: 436 RSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIK 495

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN +  GL + ++++ AL+L  EM+  G+  +  TY T   G C  G   EA++L   +
Sbjct: 496 TYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKM 555

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH-GVLVPNVVTYNIMIQGLCNDGQ 502
            +   + D   YN L    C  G++K A +L   L   G  VP V  Y  ++ G+CN   
Sbjct: 556 LVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIG 615

Query: 503 MDKARDLFLD-MEENAAAPDVITFDMLIHGF 532
           +++A  L+LD M       +  T++ L+ G 
Sbjct: 616 VEEAV-LYLDKMLNEGICLNAATWNALVRGL 645



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 233/474 (49%), Gaps = 12/474 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  P +  YN L++      R  +    +  + R    PN  T+N L+K L   +
Sbjct: 139 RIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNN 198

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R+  A  L  ++   GCEP+V++Y T+I+ + + G         EE      E+ +  +P
Sbjct: 199 RVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKV-------EEAR----ELSIRFQP 247

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N   Y+ +I+G C+E  V +   L  QM ++ I+P+V+TY+++I  L    +   A  ++
Sbjct: 248 NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVW 307

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M  +G  P+V TF  +M       ++ EA  + + M + G  PN   YNTL+ G C  
Sbjct: 308 AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSH 367

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           GK+  A  +   ME  GC  +  +Y  LI+G+ K  ++  A  ++ +M++ G  P VV Y
Sbjct: 368 GKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY 427

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            ++   L        A  L ++M  D    +T T+ TFI GLC +G +  A+ LF  +  
Sbjct: 428 TSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQ 487

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C  +I+ YN ++DGL K  R+K A EL   +    +  N+VTYN +  G CN G+ ++
Sbjct: 488 YGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEE 547

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE-KKVMPDAS 558
           A  L   M      PD IT++ L + +    +     +LL K+    K +P+ +
Sbjct: 548 ALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVA 601



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 171/309 (55%), Gaps = 7/309 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  PN+  YN LI+  C  G++        ++ R+  +PN +T+ +LI G     
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            ++ A+ ++ K+   GC PNV+ Y +++N LCR+     A +L E+M+  N      C P
Sbjct: 404 DLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN------CPP 457

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           NTVT++T I GLC  G V+ A  LF QM+    +P++ TYN ++ GL   N   EA  L 
Sbjct: 458 NTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELV 517

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM ++G++ ++VT+N I    C   K +EA +LL  M+  GV+P+A TYNTL   +C+ 
Sbjct: 518 TEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQ 577

Query: 326 GKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           GK+  A +L   + + G    +V+ Y  L+ G C    VEEA+    +M+++GI     T
Sbjct: 578 GKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAAT 637

Query: 385 YNTLFLGLF 393
           +N L  GLF
Sbjct: 638 WNALVRGLF 646



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 216/460 (46%), Gaps = 46/460 (10%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F     T+  +I+ L  E  +     L  ++K  G   +   +  +IN   R G    AL
Sbjct: 75  FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQAL 134

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +F  +     E G  C+P    Y+ ++D +  E      + ++  MK +   P+V TYN
Sbjct: 135 KMFYRIR----EFG--CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYN 188

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            L+  LC  N  + A +L +EM ++G +P VV++  ++  + K  K++EA R L +  Q 
Sbjct: 189 ILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-RELSIRFQ- 246

Query: 307 GVRPNACTYNTLMDGFCL-----------------------------------MGKINRA 331
              PN   YN L++GFC                                    +G +  A
Sbjct: 247 ---PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELA 303

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             ++  M   GC  +  ++  L+ GY     V EAL+++  M  +G +P VV YNTL  G
Sbjct: 304 LAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHG 363

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    ++  A+ +  +M+R+G + +  TY   IDG  K G ++ A E++  +    C  +
Sbjct: 364 LCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPN 423

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y  +++ LC+S     AW L   +      PN VT+N  I+GLC  G+++ A +LF 
Sbjct: 424 VVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFC 483

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ME+   +P++ T++ ++ G ++ N   +  EL+ +M+EK
Sbjct: 484 QMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 93/191 (48%), Gaps = 5/191 (2%)

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           SK  + T +TY  +   L     V+    L  +M+ +G++     +   I+   + G   
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           +A+++F  +R   C+  ++ YN L+D +    R +    ++ ++      PNV TYNI++
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
           + LC + ++D A  L ++M      PDV+++  +I    ++ +  +  EL  + +     
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ----- 246

Query: 555 PDASIVSIVVD 565
           P+ S+ + +++
Sbjct: 247 PNVSVYNALIN 257



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 13/228 (5%)

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ----VE 399
           +H  ++Y I+I    +  +V+    L ++M  +GI  +      LF+ +   ++     E
Sbjct: 76  QHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCS----EDLFINVINTYRRVGLAE 131

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            ALK+F  ++  G     + Y   +D +           ++  ++    E ++  YN L+
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
             LCK+ R+  A +L   + +    P+VV+Y  +I  +   G++++AR+L +  +     
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ----- 246

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           P+V  ++ LI+GF R  +  +V  LL +M EK + P+    S V+  L
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 250/523 (47%), Gaps = 48/523 (9%)

Query: 82  HYDTRLNATGLFPNLYTYN----ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
            + +RL  +   P+ +T N     LIN  C  G +SL F+A+  ++   +TP+ ++FNS+
Sbjct: 7   QFLSRLRKSSNLPDPFTCNKHIHQLINSNC--GILSLKFLAY--LVSRGYTPHRSSFNSV 62

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
           +  +    ++  A  +   +  FGCEP+VI+YN+LI+G CR G    A  + E +   +G
Sbjct: 63  VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122

Query: 198 EI----------------------------GVV---CKPNTVTYSTIIDGLCKEGFVDKA 226
            I                            GV+   C PN VTYST ID  CK G +  A
Sbjct: 123 FICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
              F  MK + ++P+VVT+  LI G C A D   A  L+ EM    +  +VVT+  ++D 
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            CK  +M  A  +   MV+  V PN+  Y T++DGF   G  + A +    M + G + D
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
             +Y ++I+G C N +++EA  +  +M    + P +V + T+    F+  +++ A+ ++ 
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           ++   G   D    +T IDG+ KNG + EA+  F     ++   D+  Y  LID LCK G
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CIEKANDVM-YTVLIDALCKEG 417

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                  LF  +    LVP+   Y   I GLC  G +  A  L   M +     D++ + 
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            LI+G        +  ++  +M    + PD    S V DLL++
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPD----SAVFDLLIR 516



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 182/369 (49%), Gaps = 39/369 (10%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PD  T N  IH L ++N    + +    ++ +G  P   +FN ++  +CK  ++  A  +
Sbjct: 19  PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME-SMG--CKHDDVSYNILING 356
           +  M + G  P+  +YN+L+DG C  G I  A  +  S+  S G  CK D VS+N L NG
Sbjct: 79  VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           + K K ++E   +Y  ++ K   P VVTY+T      +  +++ ALK F  M+RD ++ +
Sbjct: 139 FSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPN 197

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T+T  IDG CK G +  AV L++ +R ++  L++  Y  LIDG CK G ++ A E++ 
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257

Query: 477 SLPHGVLVPN-----------------------------------VVTYNIMIQGLCNDG 501
            +    + PN                                   +  Y ++I GLC +G
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++ +A ++  DME++   PD++ F  +++ + +         + HK+ E+   PD   +S
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377

Query: 562 IVVDLLVKN 570
            ++D + KN
Sbjct: 378 TMIDGIAKN 386


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 243/469 (51%), Gaps = 54/469 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN-------ATGL--FPNLYTYNILINCFCKIGRVSLG 115
           P +  FN +L ++AK + YD  +N       A G+   P+LYT NIL+NCFC+       
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCR------- 60

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                     CF P++A                   +   K+   G EP+++T ++L+NG
Sbjct: 61  ----------CFQPSSAL------------------SYLGKMMKLGIEPDIVTASSLVNG 92

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C +     A+ +  +M     ++G+  K + V  + +ID LCK   V  A  +  +MKD
Sbjct: 93  FCLSNSIKDAVYVAGQME----KMGI--KRDVVVDTILIDTLCKNRLVVPALEVLKRMKD 146

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             I+P+VVTY+SLI GLC +    +A+R   EM  + + P+V+TF+ ++D   K  K+ +
Sbjct: 147 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 206

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
              +  +M+Q  + PN  TY++L+ G C+  +++ A ++   M S GC  + V+Y+ L N
Sbjct: 207 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 266

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+ K+  V++ + L  +M  +G+    V+ NTL  G F+  +++ AL +F  M  +G+  
Sbjct: 267 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 326

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           + R+Y   + GL  NG + +A+  F  ++  + +LDI  Y  +I G+CK+  +K A++LF
Sbjct: 327 NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 386

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL--FLD--MEENAAAP 520
             L    + P+   Y IMI  L   G   +A  L  F    + +N +AP
Sbjct: 387 YKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNESAP 435



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 214/401 (53%), Gaps = 3/401 (0%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+++ +N ++  + +     + +NL++ + N  G   +   P+  T + +++  C+    
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEG---IEISPDLYTCNILVNCFCRCFQP 64

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             A +   +M    I PD+VT +SL++G C +N   +A  +  +M   G++  VV   ++
Sbjct: 65  SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 124

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +D LCKNR +  A  +L  M  RG+ PN  TY++L+ G C  G++  AE     M+S   
Sbjct: 125 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 184

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + ++++ LI+ Y K  ++ +  S+Y+ M+   I P V TY++L  GL   ++V+ A+K
Sbjct: 185 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 244

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           + D M   G   +  TY+T  +G  K+  + + ++L   +       +  + N LI G  
Sbjct: 245 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 304

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           ++G++  A  +F  +    L+PN+ +YNI++ GL  +G+++KA   F  M++     D+I
Sbjct: 305 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 364

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           T+ ++IHG  +     +  +L +K+K K+V PD    +I++
Sbjct: 365 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 405



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 168/344 (48%), Gaps = 3/344 (0%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQ--PSVVTFNVIMDELCKNRKMDEA 296
           P +V +N ++  +     ++    L+  + + +G++  P + T N++++  C+  +   A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
              L  M++ G+ P+  T ++L++GFCL   I  A  + G ME MG K D V   ILI+ 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CKN+ V  AL + + M  +GI P VVTY++L  GL +  ++  A +   EM    +  +
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             T++  ID   K G + +   +++ +  +  + ++  Y+ LI GLC   R+  A ++  
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +      PNVVTY+ +  G     ++D    L  DM +   A + ++ + LI G+ +  
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 307

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           +      +   M    ++P+    +IV+  L  N    K+L  F
Sbjct: 308 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRF 351


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 230/461 (49%), Gaps = 12/461 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G  PN+  YN LI+ +CK G V   +  F ++    F P   TF SL+ G        
Sbjct: 236 GKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFE 295

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
               L  ++K  G   NV  YN +I+   + G  + A +  +EM+         C+P+ V
Sbjct: 296 AIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSEN------CCEPDLV 349

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T+I+  C  G V++A+ L  Q     + P+ +TY  L+HG C   ++ +A    IEM
Sbjct: 350 TYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEM 409

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G++  ++++  ++  L    ++D A  + D M+ RG+ P+A  YN LM+G    GK+
Sbjct: 410 STSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKL 469

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A+ +   M       D   Y  L++G+ ++  ++EA  L++ ++ KG+ P VV YN +
Sbjct: 470 SMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVM 529

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +   +++A+   D+M+R     D  T++T IDG  K   +   +++F  +    C
Sbjct: 530 IKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNC 589

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + ++  Y  LI+G C+ G  K A +LF  +    L P+VVTY+I+I   C + ++ KA  
Sbjct: 590 KPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVS 649

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRIN------EPSKVNE 543
            F  M  N   P+   F  L++GF          EP+ ++E
Sbjct: 650 YFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHE 690



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 237/492 (48%), Gaps = 10/492 (2%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILR----SCFTPNAATFNSLIKGLHAESRIM 148
            P+ Y  N L+N   K  R+      +  ++          +  T + ++KGL  + RI 
Sbjct: 166 LPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIE 225

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +   L       GC PN++ YNTLI+G C+ G    A  LF+++       G +  P   
Sbjct: 226 DGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMK----GFI--PTLQ 279

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T+ ++++G CK G  +    L L+MKD  ++ +V  YN++I          +AK    EM
Sbjct: 280 TFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEM 339

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +   +P +VT+N +++  C   +++EA +LL+  ++RG+ PN  TY  L+ G+C  G+ 
Sbjct: 340 SENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEY 399

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A +    M + G + D +SY  LI+G     EV+ AL++   M+++GI P    YN L
Sbjct: 400 TKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVL 459

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GLF+  ++  A  +  EM    +A D   Y T +DG  ++G + EA +LF+ +     
Sbjct: 460 MNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGL 519

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           +  +  YN +I G  KSG +  A      +     VP++ T++ +I G      M+    
Sbjct: 520 DPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLK 579

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +F  M +    P+V+T+  LI+G+ R  E     +L   M+   + P     SI++    
Sbjct: 580 IFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639

Query: 569 KNEISLKSLPSF 580
           K     K++  F
Sbjct: 640 KEAKLGKAVSYF 651



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 228/522 (43%), Gaps = 61/522 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N L+    K    ++      +L   G  P L T+  L+N FCK+G      + 
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +     + N   +N++I   +     ++A     ++    CEP+++TYNTLIN  C 
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L E+       I     PN +TY+ ++ G CK+G   KA    ++M    +
Sbjct: 361 RGEVEEAEKLLEQT------IRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGL 414

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D+++Y +LIHGL  A + + A  +   MM++G+ P    +NV+M+ L K  K+  A  
Sbjct: 415 EVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKV 474

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L  M+ + + P+A  Y TL+DGF   G ++ A++LF  +   G     V YN++I G+ 
Sbjct: 475 MLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFS 534

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K+  ++ A+    +M      P + T++T+  G  + H +   LK+F  M +     +  
Sbjct: 535 KSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVV 594

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT+ I+G C+ G    A +LF  +R    +  +  Y+ LI   CK  +L  A   F  +
Sbjct: 595 TYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELM 654

Query: 479 PHGVLVPNVVTYNIMIQGLCN----------DGQMDKARDLFLDM---------EENAAA 519
                 PN   ++ ++ G  N          +   + +R +F D           + AAA
Sbjct: 655 LINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAA 714

Query: 520 ------------------------------PDVITFDMLIHG 531
                                          D ++F  LIHG
Sbjct: 715 YNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHG 756



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 214/479 (44%), Gaps = 59/479 (12%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+L TYN LIN FC  G V        + +R    PN  T+  L+ G   +    +A   
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++   G E ++I+Y  LI+GL   G    AL + + M N     G++  P+   Y+ +
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR----GIL--PDANIYNVL 459

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ++GL K+G +  AK +  +M D+NI PD   Y +L+ G     + +EAK+LF  ++++G+
Sbjct: 460 MNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGL 519

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VV +NV++    K+  MD A   +D M +    P+  T++T++DG+     +N   +
Sbjct: 520 DPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLK 579

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF---- 389
           +FG M    CK + V+Y  LINGYC+  E + A  L+  M S G+KP+VVTY+ L     
Sbjct: 580 IFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639

Query: 390 --------LGLFEI-----------------------------------HQVEHAL--KL 404
                   +  FE+                                   H+   ++    
Sbjct: 640 KEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDF 699

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F  M  DG       Y   +  LC+   +  A++L   +       D  ++  LI G+C 
Sbjct: 700 FSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICL 759

Query: 465 SGRLKFAWE--LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            G  K  W   + C L  G L    + Y++ +     +G + +A  +   M +   +P+
Sbjct: 760 EGNSK-EWRNMISCDLNEGEL-QIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 20/304 (6%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P +  YN++I  F K G +    +   ++ R+   P+  TF+++I G   +  +   
Sbjct: 518 GLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAV 577

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F  +    C+PNV+TY +LING CR G T +A  LF  M +         KP+ VTY
Sbjct: 578 LKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG------LKPSVVTY 631

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC--------------HAN 256
           S +I   CKE  + KA + F  M      P+   ++ L++G                H N
Sbjct: 632 SILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHEN 691

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
             +  +  F  M+  G       +N I+  LC+ R +  A +L + M+  G+  +A ++ 
Sbjct: 692 SRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFV 751

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L+ G CL G       +     + G     + Y++ ++ +     + EA  + + M+  
Sbjct: 752 ALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKG 811

Query: 377 GIKP 380
            + P
Sbjct: 812 YVSP 815



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 20/280 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNI 101
           N   CI D M R H   P + +F+ ++    K  + +  L   GL       PN+ TY  
Sbjct: 541 NAILCI-DKMRRAH-HVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTS 598

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN +C+ G   +    F  +      P+  T++ LI     E+++ +A + F  +    
Sbjct: 599 LINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINK 658

Query: 162 CEPNVITYNTLINGLCRTGHTMIAL----------NLFEEMANGNGEIGVVCKPNTVTYS 211
           C PN   ++ L+NG   T  T ++           ++FE+  +    IG         Y+
Sbjct: 659 CTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSR--MIGDGWTQKAAAYN 716

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            I+  LC++  V  A  L  +M    +  D V++ +LIHG+C   +  E + +    +++
Sbjct: 717 CILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNE 776

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           G     + +++ +D+      + EAS +L  M++  V PN
Sbjct: 777 GELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 34/216 (15%)

Query: 363 VEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTY 420
           V++AL +Y  +V      P+    N+L   L +  ++E A +L+DEM  RD         
Sbjct: 149 VDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNG------- 201

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
               D +C + Y                       + ++ GLC  GR++   +L  S   
Sbjct: 202 ----DDICVDNYTT---------------------SIMVKGLCLKGRIEDGIKLIESRWG 236

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
              VPN+V YN +I G C  G+++ A  LF  ++     P + TF  L++GF ++     
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA 296

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           ++ LL +MK++ +  +  + + ++D   K    +K+
Sbjct: 297 IDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKA 332


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 200/368 (54%), Gaps = 29/368 (7%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+FP+   Y  +I+ FCK+G VS     F  + R    P+  T+ S+I G+    +
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-------------- 192
           ++EA  +F ++   G EP+ +TY  LI+G C+ G    A ++  +M              
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 193 -ANG---NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            A+G   NGEI V             +PN  TY+TI++GLCK G +++   L  +M    
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD +TY +L+   C   +  +A  L   M+++ +QP++VTFNV+M+  C +  +++  
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           RL++ M+++G+ PNA T+N+LM  +C+   +    E++ +M   G   D  +YNILI G+
Sbjct: 578 RLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGH 637

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK + ++EA  L++EMV KG   T  TY+ L  G ++  +   A KLF+EM++ G+ A+ 
Sbjct: 638 CKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEK 697

Query: 418 RTYTTFID 425
             Y  F+D
Sbjct: 698 DIYDIFVD 705



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 234/444 (52%), Gaps = 6/444 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   G FP++ +Y ++++ +C+IG +         +      P+   +N++I  L    
Sbjct: 267 QMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNG 326

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            ++EA  L   ++ +G  P+ + Y T+I+G C+ G+   A  LF+EM            P
Sbjct: 327 EVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK------IVP 380

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VTY+++I G+CK G + +A+ +F +M  + + PD VTY +LI G C A +  EA  + 
Sbjct: 381 DIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVH 440

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M+ +G+ P+VVT+  + D LCKN ++D A+ LL  M ++G++PN  TYNT+++G C +
Sbjct: 441 NQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKI 500

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G I +  +L   M+  G   D ++Y  L++ YCK  E+ +A  L R M++K ++PT+VT+
Sbjct: 501 GNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTF 560

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  G      +E   +L + M   G+  +  T+ + +   C    +    E+++ +  
Sbjct: 561 NVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHD 620

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D   YN LI G CK+  +K AW L   +          TY+ +I+G     +  +
Sbjct: 621 RGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVE 680

Query: 506 ARDLFLDMEENAAAPDVITFDMLI 529
           AR LF +M ++    +   +D+ +
Sbjct: 681 ARKLFEEMRKHGLVAEKDIYDIFV 704



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 250/518 (48%), Gaps = 16/518 (3%)

Query: 87  LNATGLFPNLYTYNILI-----NCF-----CKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L A  LF  L  Y +++     N F     C    + +    F          N  + N 
Sbjct: 188 LEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNI 247

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           ++  L    ++ EA  L  ++   G  P+V++Y  +++G CR G     L L +E+  G 
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL-KGK 306

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
           G      KP+   Y+ II  LCK G V +A+ L   M+   + PD V Y ++I G C   
Sbjct: 307 G-----LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           + + A +LF EM  + + P +VT+  ++  +CK+ KM EA  + + M+ +G+ P+  TY 
Sbjct: 362 NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYT 421

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L+DG+C  G++  A  +   M   G   + V+Y  L +G CKN E++ A  L  EM  K
Sbjct: 422 ALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK 481

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G++P V TYNT+  GL +I  +E  +KL +EM   G   DT TYTT +D  CK G + +A
Sbjct: 482 GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKA 541

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
            EL R +   + +  +  +N L++G C SG L+    L   +    ++PN  T+N +++ 
Sbjct: 542 HELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQ 601

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
            C    M    +++  M +    PD  T+++LI G  +     +   L  +M EK     
Sbjct: 602 YCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVT 661

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           A+    ++    K +  +++   F    + G V E ++
Sbjct: 662 AATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDI 699



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 211/423 (49%), Gaps = 6/423 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L   GL P+ Y YN +I   CK G V         + +    P+   + ++I G      
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A  LF +++     P+++TY ++I+G+C++G  + A  +F EM     E      P+
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE------PD 416

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+ +IDG CK G + +A ++  QM  + + P+VVTY +L  GLC   + + A  L  
Sbjct: 417 EVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLH 476

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  +G+QP+V T+N I++ LCK   +++  +L++ M   G  P+  TY TLMD +C MG
Sbjct: 477 EMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMG 536

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           ++ +A EL   M +   +   V++N+L+NG+C +  +E+   L   M+ KGI P   T+N
Sbjct: 537 EMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFN 596

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L       + +    +++  M   GV  D+ TY   I G CK   + EA  L + +   
Sbjct: 597 SLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK 656

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              +    Y+ LI G  K  +   A +LF  +    LV     Y+I +     +G  +  
Sbjct: 657 GYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEIT 716

Query: 507 RDL 509
            +L
Sbjct: 717 LEL 719



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 189/354 (53%), Gaps = 1/354 (0%)

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL-CHANDWNEAKRLFIEMMDQGVQP 275
           L + GFV +A+ LF ++    +   V + N  +  L C+      A ++F E  + GV  
Sbjct: 181 LVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCW 240

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           + V+ N+++  LC+  K+ EA  LL  M  RG  P+  +Y  ++ G+C +G++++  +L 
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ++  G K D+  YN +I   CKN EV EA  L R M   G+ P  V Y T+  G  ++
Sbjct: 301 DELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL 360

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
             V  A KLFDEM+R  +  D  TYT+ I G+CK+G ++EA E+F  + +   E D   Y
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
             LIDG CK+G +K A+ +   +    L PNVVTY  +  GLC +G++D A +L  +M  
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               P+V T++ +++G  +I    +  +L+ +M      PD    + ++D   K
Sbjct: 481 KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCK 534



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 201/410 (49%), Gaps = 42/410 (10%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGL-CRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++EA  LF KL  +G   +V + N  ++ L C      IA+ +FEE      E+GV    
Sbjct: 187 VLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP----ELGVCW-- 240

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           NTV+        C                           N ++H LC      EA  L 
Sbjct: 241 NTVS--------C---------------------------NIVLHCLCQLGKVREAHNLL 265

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           ++M D+G  P VV++ V++   C+  ++D+  +L+D +  +G++P+   YN ++   C  
Sbjct: 266 VQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKN 325

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G++  AE+L   M   G   D+V Y  +I+G+CK   V  A  L+ EM  K I P +VTY
Sbjct: 326 GEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTY 385

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            ++  G+ +  ++  A ++F+EM   G+  D  TYT  IDG CK G + EA  +   +  
Sbjct: 386 TSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ 445

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                ++  Y  L DGLCK+G +  A EL   +    L PNV TYN ++ GLC  G +++
Sbjct: 446 KGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQ 505

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
              L  +M+     PD IT+  L+  + ++ E +K +ELL  M  K++ P
Sbjct: 506 TVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQP 555



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 178/379 (46%), Gaps = 11/379 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR-----LNATGLFPNLYTYNILINCFC 107
           +FD M R    P  V+  +++       K  + R     +   GL P+  TY  LI+ +C
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           K G +   F    ++++   TPN  T+ +L  GL     I  A  L  ++   G +PNV 
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           TYNT++NGLC+ G+    + L EEM            P+T+TY+T++D  CK G + KA 
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAG------FYPDTITYTTLMDAYCKMGEMAKAH 542

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L   M ++ + P +VT+N L++G C +    + +RL   M+++G+ P+  TFN +M + 
Sbjct: 543 ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY 602

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C    M   + +   M  RGV P++ TYN L+ G C    +  A  L   M   G     
Sbjct: 603 CIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTA 662

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            +Y+ LI G+ K K+  EA  L+ EM   G+      Y+      +E    E  L+L DE
Sbjct: 663 ATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722

Query: 408 MQRDGVAADTRTYTTFIDG 426
              +        Y  F  G
Sbjct: 723 FMTELSGTIFVVYICFFIG 741



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 10/338 (2%)

Query: 241 DVVTYNSLIHGLCHAN--DWNEAKRLFIEMM-----DQGVQPSVVTFNVIMDELCKNRKM 293
           D+ T   L+   C     D +++  LF EM+     D G  P V  F++    L +N  +
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLV--FDLYFQVLVENGFV 187

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGF-CLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            EA +L   +++ GV  +  + N  +    C    I  A ++F     +G   + VS NI
Sbjct: 188 LEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNI 247

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +++  C+  +V EA +L  +M  +G  P VV+Y  +  G   I +++  LKL DE++  G
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D   Y   I  LCKNG ++EA +L R +R      D   Y  +I G CK G +  A 
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF  +    +VP++VTY  +I G+C  G+M +AR++F +M      PD +T+  LI G+
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +  E  +   + ++M +K + P+    + + D L KN
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 247/487 (50%), Gaps = 24/487 (4%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTY 99
           P+EA  +F  +  +    P + + N +L  L K  H   R+          G+ P++ TY
Sbjct: 122 PDEALSVFGRLREL----PALPACNAILDGLVK-AHMLARVWELFDEMLGRGMVPSVVTY 176

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           N LIN     G V+  +  + +++     PN  T+ ++I  L  E  I +A  LF ++K 
Sbjct: 177 NTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKE 236

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  PN+ TYN L++   +  +   AL  + ++     + G+V  PN V ++T+IDGLCK
Sbjct: 237 AGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDVIFTTLIDGLCK 290

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
              + +AK +FL M    + P V  YNSLIHG   +    EA   F E++ + ++P   T
Sbjct: 291 ANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFT 350

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
            ++++  LC   +M  A+R L++M Q G+  NA  YN L+D +C  G ++ A      M 
Sbjct: 351 CSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMS 410

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            +G + + V+Y+ LI+G+ KN E+E A+++Y EMV+KG++P VVTY  L  G  +   ++
Sbjct: 411 EVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMD 470

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE------LDIQ 453
            A  L  EM+  G+ ++  T +  +DGLC+   + +AV         K         +  
Sbjct: 471 AAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  LI GL   G+   A   F  +    +VP+  TY ++I+GLC  G +  A  L+ DM
Sbjct: 531 TYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADM 590

Query: 514 EENAAAP 520
            +    P
Sbjct: 591 VKVGVKP 597



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 215/416 (51%), Gaps = 10/416 (2%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA ++F +L+     P +   N +++GL +         LF+EM  G G +     P+ V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEML-GRGMV-----PSVV 174

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T+I+    +G V KA  ++ QM    I+P+VVTY ++I+ LC  +   +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEM 234

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            + G++P++ T+N +M    K   +  A      +++ G+ PN   + TL+DG C   +I
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRI 294

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ +F  M           YN LI+G  ++   +EAL+ ++E++ K ++P   T + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIV 354

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +  Q++ A +  + MQ+ G+A +   Y   ID  CK+G + EA+     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           E ++  Y+ LIDG  K+G ++ A  ++  +    + PNVVTY  +I G   +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINE-PSKVNELLHKMKEKKVMPDASIVSIV 563
           L  +MEE     + IT  +L+ G  R N     V  ++    +KK   + SI + V
Sbjct: 475 LQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSV 530



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 180/359 (50%)

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + I+DGL K   + +   LF +M    + P VVTYN+LI+   H  D  +A  ++ +M+ 
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + + P+VVT+  ++  LC+   + +A  L   M + G+RPN  TYN LM        I  
Sbjct: 202 RRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH 261

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A   +  +   G   +DV +  LI+G CK   + EA +++ +M    + PTV  YN+L  
Sbjct: 262 ALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIH 321

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G F     + AL  F E+ R  +  D  T +  + GLC  G +  A      ++     L
Sbjct: 322 GAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIAL 381

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +  AYN LID  CKSG L  A      +    + PNVVTY+ +I G   +G+M+ A  ++
Sbjct: 382 NAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIY 441

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +M      P+V+T+  LIHG  +  +      L  +M+EK +  +A  VS++VD L +
Sbjct: 442 TEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCR 500



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 162/369 (43%), Gaps = 78/369 (21%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ PNLYTYN L++   K   +    + +  +L+    PN   F +LI GL   +R
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANR 293

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLING------------------------------- 175
           I EA  +F  +  +   P V  YN+LI+G                               
Sbjct: 294 ITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSI 353

Query: 176 ----LCRTGHTMIALNLFEEMA--------------------NGN-----------GEIG 200
               LC  G   +A    E M                     +GN            E+G
Sbjct: 354 VVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVG 413

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           V  +PN VTYS++IDG  K G ++ A A++ +M  + + P+VVTY +LIHG     D + 
Sbjct: 414 V--EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDA 471

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR--------PNA 312
           A  L  EM ++G+  + +T +V++D LC+  ++ +A R +  M   G +         N+
Sbjct: 472 AFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI--MEYSGQKKSEKNPSIANS 529

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TY TL+ G  + G+ N A   F  M   G   D  +Y ++I G C    V  A+ LY +
Sbjct: 530 VTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYAD 589

Query: 373 MVSKGIKPT 381
           MV  G+KPT
Sbjct: 590 MVKVGVKPT 598



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 121/235 (51%), Gaps = 14/235 (5%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +  +G+  N   YN+LI+ +CK G +    +   R+      PN  T++SLI G H+++ 
Sbjct: 374 MQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDG-HSKNG 432

Query: 147 IME-AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            ME A A++T++ A G EPNV+TY  LI+G  + G    A  L +EM     E G+    
Sbjct: 433 EMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEME----EKGIYS-- 486

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQ---MKDENINPDV---VTYNSLIHGLCHANDWN 259
           N +T S ++DGLC+E  V  A    ++    K    NP +   VTY +LI+GL     +N
Sbjct: 487 NAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYN 546

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           EA   F  M D G+ P   T+ +++  LC    +  A  L   MV+ GV+P  C 
Sbjct: 547 EACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 44/239 (18%)

Query: 364 EEALSLY---REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +EALS++   RE+      P +   N +  GL + H +    +LFDEM   G+     TY
Sbjct: 123 DEALSVFGRLREL------PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTY 176

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I+     G + +A E++  +   + + ++  Y  +I  LC+   +  A  LF  +  
Sbjct: 177 NTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKE 236

Query: 481 GVLVPNVVTYN-----------------------------------IMIQGLCNDGQMDK 505
             + PN+ TYN                                    +I GLC   ++ +
Sbjct: 237 AGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITE 296

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           A+++FLDM     AP V  ++ LIHG  R     +      ++  K++ PD    SIVV
Sbjct: 297 AKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVV 355


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 261/554 (47%), Gaps = 54/554 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYN 100
           ++A  I+DY++ ++ S P V + N LL+ + K++        YD      G   N Y+  
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDN-YSTC 209

Query: 101 ILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
           I++   C  G+V  G  +   R  + C  PN   +N++I G      I  A  +F +LK 
Sbjct: 210 IMVKGMCSEGKVEEGRKLIEDRWGKGC-VPNIVFYNTIIGGYCKLGDIENAKLVFKELKL 268

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV----------------- 202
            G  P + T+ T+ING C+ G  + +  L EE+      + V                  
Sbjct: 269 KGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVD 328

Query: 203 ------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
                       CKP+  TY+ +I+ LCKEG  + A  L  +   + +    ++Y  LI 
Sbjct: 329 PAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQ 388

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
             C + +++ A +L +++ ++G +P +VT+ +++  L  +  MD+A  +   ++ RGV P
Sbjct: 389 AYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +A  YN LM G C  G+   A+ LF  M       D   Y  LI+G+ ++ + +EA  ++
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVF 508

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
              V KG+K  VV +N +  G      ++ AL   + M  + +  D  TY+T IDG  K 
Sbjct: 509 TLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             +  A+++FR +   KC+ ++  Y  LI+G C  G    A E F  +    LVPNVVTY
Sbjct: 569 QDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTY 628

Query: 491 NIMIQGLCNDGQ-MDKARDLFLDMEENAAAPDVITFDMLIHGFIR------INEPSKVN- 542
             +I+    +   ++KA   +  M  N   P+ +TF+ L+ GF++      + EP   N 
Sbjct: 629 TTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNH 688

Query: 543 -------ELLHKMK 549
                  E  H+MK
Sbjct: 689 GQSFLFFEFFHRMK 702



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 232/485 (47%), Gaps = 45/485 (9%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            P+    N+L+  +    R+ +A  ++ ++ +  GC  N  T   ++ G+C  G      
Sbjct: 167 VPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTC-IMVKGMCSEGKVEEGR 225

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L E+        G  C PN V Y+TII G CK G ++ AK +F ++K +   P + T+ 
Sbjct: 226 KLIED------RWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFG 279

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGV--------------------------------- 273
           ++I+G C   D+  + RL  E+ ++G+                                 
Sbjct: 280 TMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVAN 339

Query: 274 --QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
             +P + T+N++++ LCK  K + A+ LLD   ++G+     +Y  L+  +C   + + A
Sbjct: 340 DCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIA 399

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   +   GCK D V+Y ILI+G   +  +++A+++  +++ +G+ P    YN L  G
Sbjct: 400 SKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-CEL 450
           L +  +   A  LF EM    +  D   Y T IDG  ++G   EA ++F TL + K  ++
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVF-TLSVEKGVKV 518

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+  +N +I G C+SG L  A      +    LVP+  TY+ +I G      M  A  +F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            DME+N   P+V+T+  LI+GF    + S   E   +M+ + ++P+    + ++    K 
Sbjct: 579 RDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKE 638

Query: 571 EISLK 575
             +L+
Sbjct: 639 SSTLE 643



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 203/425 (47%), Gaps = 12/425 (2%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST--IIDGLCKEG 221
           P+VI  N L++ + ++     A  +++EM    G     C  N   YST  ++ G+C EG
Sbjct: 168 PDVIACNALLSLVVKSRRLEDARKVYDEMCERGG-----CVDN---YSTCIMVKGMCSEG 219

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V++ + L      +   P++V YN++I G C   D   AK +F E+  +G  P++ TF 
Sbjct: 220 KVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFG 279

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG-KINRAEELFGSMES 340
            +++  CK      + RLL+ + +RG+R      N ++D     G K++ AE +   + +
Sbjct: 280 TMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVAN 339

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
             CK D  +YNILIN  CK  + E A  L  E   KG+  T ++Y  L     +  + + 
Sbjct: 340 -DCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDI 398

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A KL  ++   G   D  TY   I GL  +G++ +AV +   L       D   YN L+ 
Sbjct: 399 ASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GLCK+GR   A  LF  +    ++P+   Y  +I G    G  D+AR +F    E     
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKV 518

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           DV+  + +I GF R     +    +++M E+ ++PD    S ++D  VK +    ++  F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578

Query: 581 LVQER 585
              E+
Sbjct: 579 RDMEK 583



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 163/349 (46%), Gaps = 27/349 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++ IL+  L  + H D  +N        G+ P+   YN+L++  CK GR     + 
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +L     P+A  + +LI G        EA  +FT     G + +V+ +N +I G CR
Sbjct: 473 FSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCR 532

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           +G    AL     M   N E  V   P+  TYSTIIDG  K+  +  A  +F  M+    
Sbjct: 533 SGMLDEALACMNRM---NEEHLV---PDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKC 586

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK-NRKMDEAS 297
            P+VVTY SLI+G C   D++ A+  F EM  + + P+VVT+  ++    K +  +++A 
Sbjct: 587 KPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAV 646

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFC------LMGK---INRAE-----ELFGSMESMGC 343
              +LM+     PN  T+N L+ GF        +G+    N  +     E F  M+S G 
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGW 706

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
                +YN ++   C +  V+ A  L   MV KG  P  V++  +  G 
Sbjct: 707 SDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGF 755



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 182/423 (43%), Gaps = 62/423 (14%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P ++++NIL+  L K    +         +  GL     +Y  LI  +CK     +    
Sbjct: 343 PDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKL 402

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++      P+  T+  LI GL     + +A  +  KL   G  P+   YN L++GLC+
Sbjct: 403 LLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           TG  + A  LF EM + +        P+   Y+T+IDG  + G  D+A+ +F    ++ +
Sbjct: 463 TGRFLPAKLLFSEMLDRS------ILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGV 516

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             DVV +N++I G C +   +EA      M ++ + P   T++ I+D   K + M  A +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +   M +   +PN  TY +L++GFC  G  + AEE F  M+S     + V+Y  LI  + 
Sbjct: 577 IFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFA 636

Query: 359 K-NKEVEEALSLYREMVSKGIKPTVVTYNTL-----------FLG------------LFE 394
           K +  +E+A+  +  M++    P  VT+N L           FLG             FE
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFE 696

Query: 395 -------------------------IH-QVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
                                    +H  V+ A  L D M + G + D  ++   + G C
Sbjct: 697 FFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFC 756

Query: 429 KNG 431
             G
Sbjct: 757 VVG 759



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 23/230 (10%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+ TY  LIN FC  G  SL    F  +      PN  T+ +LI+    ES  +E A  
Sbjct: 588 PNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVY 647

Query: 154 FTKLKAFG-CEPNVITYNTLINGLCRT--------------GHTMIALNLFEEM-ANGNG 197
           + +L     C PN +T+N L+ G  +               G + +    F  M ++G  
Sbjct: 648 YWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWS 707

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
           + G         Y++++  LC  G V  A  L  +M  +  +PD V++ +++HG C   +
Sbjct: 708 DHGA-------AYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGN 760

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
             + + +    +D+      V ++ ++++      + EAS +L  MV++ 
Sbjct: 761 SKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEKA 810


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 207/381 (54%), Gaps = 9/381 (2%)

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
             ++++  +G  P V  YN LIN  C+ G    A  +F E+           +P TV+++
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFN 262

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+GLCK   +D+   L   M++  I PDV TY+ LIHGLC     + A++LF EM  +
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G++P+ +TF  ++D  C++R++D A      M+  GV+P+   YNTL++G C +G +N+A
Sbjct: 323 GLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M  +G K D ++Y  LI+GYCK  ++E A+ + + M  +G+    V +  L  G
Sbjct: 383 RKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISG 442

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
                +V  A +   EM   G+  D  TYT  IDG CK G +    +L + ++I   +  
Sbjct: 443 FCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN L++GLCK G++K A  L  ++ +  + P+ +TYNI+++G C +G   KA DL  
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLK 559

Query: 512 DMEENAAAPDVITFDMLIHGF 532
              E     D   +  L+  +
Sbjct: 560 LRNEKGLIVDYAYYTSLVSEY 580



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 201/387 (51%), Gaps = 13/387 (3%)

Query: 188 LFEEMANGNGEIGVVC----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           L ++M N N  + +             P    Y+ +I+  CKEG +  AK +F +++   
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P  V++N+LI+GLC + + +E  RL   M +  + P V T++V++  LCK  ++D A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L D M QRG+RPN  T+  L+DG C   +I+ A   +  M +MG K D V YN L+NG 
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +V +A  L  EM   G+KP  +TY TL  G  +   +E A+++   M  +GV  D 
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             +T  I G C++G + +A    R +     + D   Y  +IDG CK G +K  ++L   
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      P V+TYN+++ GLC  GQM  A  L   M      PD IT+++L+ G  +   
Sbjct: 494 MQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK--- 550

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
             K  +LL    EK ++ D +  + +V
Sbjct: 551 NGKAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 192/375 (51%), Gaps = 9/375 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P +  YNILIN FCK G +    + F  I +    P   +FN+LI GL     + E 
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   ++     P+V TY+ LI+GLC+ G   +A  LF+EM           +PN +T+
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG------LRPNGITF 331

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +IDG C+   +D A   + QM    + PD+V YN+L++GLC   D N+A++L  EM  
Sbjct: 332 TALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRM 391

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G++P  +T+  ++D  CK   ++ A  +   M + GV  +   +  L+ GFC  G++  
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE     M   G K DD +Y ++I+GYCK   V+    L +EM   G KP V+TYN L  
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  Q+++A  L + M   GV  D  TY   ++G CKNG   +A +L +        +
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIV 568

Query: 451 DIQAYNCLIDGLCKS 465
           D   Y  L+    KS
Sbjct: 569 DYAYYTSLVSEYNKS 583



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 186/331 (56%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P V  YN LI+  C      +AK +F E+  +G++P+ V+FN +++ LCK+R +DE  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              M +  + P+  TY+ L+ G C  G+++ AE+LF  M+  G + + +++  LI+G C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           ++ ++ A++ Y +M++ G+KP +V YNTL  GL ++  V  A KL DEM+  G+  D  T
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           YTT IDG CK G +  A+E+ + +      LD  A+  LI G C+ GR++ A      + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P+  TY ++I G C  G +     L  +M+ N   P VIT+++L++G  +  +  
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             N LL  M    V PD    +I+++   KN
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKN 551



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 185/349 (53%), Gaps = 6/349 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  IL   F P    +N LI     E  I +A  +F +++  G  P  +++NTLINGLC+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           + +      L + M            P+  TYS +I GLCKEG +D A+ LF +M+   +
Sbjct: 271 SRNLDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL 324

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ +T+ +LI G C +   + A   + +M+  GV+P +V +N +++ LCK   +++A +
Sbjct: 325 RPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+D M   G++P+  TY TL+DG+C  G +  A E+   M   G   D+V++  LI+G+C
Sbjct: 385 LVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFC 444

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           ++  V +A    REMV  G+KP   TY  +  G  +   V+   KL  EMQ +G      
Sbjct: 445 RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI 504

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           TY   ++GLCK G +  A  L   +  L    D   YN L++G CK+G+
Sbjct: 505 TYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 178/330 (53%), Gaps = 15/330 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT--RLNAT----GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   SFN L+  L K+++ D   RL  T     ++P+++TY++LI+  CK GR+ +    
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + +    PN  TF +LI G     RI  A   + ++   G +P+++ YNTL+NGLC+
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L +EM        V  KP+ +TY+T+IDG CKEG ++ A  +   M +E +
Sbjct: 376 VGDVNKARKLVDEMRM------VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D V + +LI G C      +A+R   EM++ G++P   T+ +++D  CK   +    +
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M   G +P   TYN LM+G C  G++  A  L  +M ++G   DD++YNIL+ G+C
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           KN + E+ L L  E   KG+      Y +L
Sbjct: 550 KNGKAEDLLKLRNE---KGLIVDYAYYTSL 576


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 245/513 (47%), Gaps = 51/513 (9%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++ + N L+N   + G++ +    +  + R    PN  T+   IK L  +    EA
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F +++  G  PN +T +T I GLC    + +       +   N  I      +T  Y
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPI------DTFAY 300

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I G C E  + +A+ +F+ M +E I PD   Y +LIH  C A +  +A  L  +M+ 
Sbjct: 301 TAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ---RGVRPNACTYNTLMDGFCLMGK 327
            G++ + V  + I+  LC   +M  AS ++D   +    G+  +   YN ++D  C +GK
Sbjct: 361 NGIKTNCVIVSSILQCLC---EMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGK 417

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A EL   M+      D V Y  LI GYC   ++ +A +++ EM  +GI+P +VTYN 
Sbjct: 418 VEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNI 477

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G       + AL+L D +   G+  ++ T+   I+GLC  G + EA     TL   K
Sbjct: 478 LVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED-K 536

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLP-HGVLV---------------------- 484
           C   ++ Y+ ++DG CK+   + A+ELF  L   G+LV                      
Sbjct: 537 C---LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKAL 593

Query: 485 ------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                       PN + Y  +I   C DG M +A+ +F  + E    PDVIT+ M+I+G+
Sbjct: 594 ILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGY 653

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            R+N   +  ++ + MKE+ + PD    ++V+D
Sbjct: 654 CRVNCLREARDIFNDMKERGIKPDVITYTVVLD 686



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 272/601 (45%), Gaps = 94/601 (15%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
           A  I+ ++ R+  +P   + + I + +L +  +++  ++        G+ PN  T +  I
Sbjct: 211 AVAIYRHLKRLGLNPNDYT-YGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
              C   R  LG+ A  R LR+   P +   + ++I+G  +E ++ EA  +F  +   G 
Sbjct: 270 EGLCSHKRSDLGYEAL-RALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGI 328

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG----------------EIGVVCKP- 205
            P+   Y  LI+  C+ G+ + A+ L  +M + NG                E+G+  +  
Sbjct: 329 APDGYIYGALIHAYCKAGNLLQAVALHNDMVS-NGIKTNCVIVSSILQCLCEMGMASEVV 387

Query: 206 -------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                        + V Y+ ++D LCK G V++A  L  +MK   ++ DVV Y +LI G 
Sbjct: 388 DQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGY 447

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C      +AK +F EM ++G++P +VT+N+++    +N    EA  LLD +  +G++PN+
Sbjct: 448 CLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 507

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK------------- 359
            T+N +++G C+ GK+  AE    ++E    ++    Y+ +++GYCK             
Sbjct: 508 ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSR 563

Query: 360 ----------------------NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
                                   E ++AL L   M++  ++P  + Y  L         
Sbjct: 564 LSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGD 623

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A  +FD +   G+  D  TYT  I+G C+   + EA ++F  ++    + D+  Y  
Sbjct: 624 MKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTV 683

Query: 458 LIDGLCK-----SGRLKF----------AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           ++DG  K     +  L+F          A   +  +    + P+VV Y ++I   C    
Sbjct: 684 VLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNN 743

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +  A +L+ +M      PD++T+  L+       +  +   L+++M  K + PD+  +S+
Sbjct: 744 LQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSV 803

Query: 563 V 563
           +
Sbjct: 804 L 804



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 220/445 (49%), Gaps = 30/445 (6%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G+F +   YNI+++  CK+G+V         +     + +   + +LI G   + ++++
Sbjct: 396 SGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVD 455

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F ++K  G EP+++TYN L+ G  R G    AL L + +    G  G+  KPN+ T
Sbjct: 456 AKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI----GTQGL--KPNSAT 509

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++ II+GLC  G V +A+A    ++D+ +      Y++++ G C AN   +A  LF  + 
Sbjct: 510 HNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLS 565

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            QG+     +   ++  LC   + D+A  LL+ M+   V PN   Y  L+  FC  G + 
Sbjct: 566 KQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMK 625

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA+ +F  +   G   D ++Y ++INGYC+   + EA  ++ +M  +GIKP V+TY  + 
Sbjct: 626 RAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 685

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +++     LK+   +Q    + + +               ++A   +  ++ +  +
Sbjct: 686 DGHSKVN-----LKMARSLQFSKGSEEEK---------------MDASPFWSEMKEMGIK 725

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+  Y  LID  CK+  L+ A  L+  +    L P++VTY  ++   C+ G MD+A  L
Sbjct: 726 PDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITL 785

Query: 510 FLDMEENAAAPDVITFDMLIHGFIR 534
             +M      PD     +L  G ++
Sbjct: 786 VNEMSFKGIEPDSRAMSVLHRGILK 810



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 205/438 (46%), Gaps = 20/438 (4%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI---------- 199
           A + FT+LK  G + NV TY  LI  LCR        +L  E+      +          
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 200 ------GVVCKPNTVTYSTIIDGLCKE----GFVDKAKALFLQMKDENINPDVVTYNSLI 249
                 G V   ++     ++D L K     G  D+A     Q K     P +++ N L+
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLM 199

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           + L      + A  ++  +   G+ P+  T+ + +  LC+    +EA  +   M + GV 
Sbjct: 200 NRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN 259

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PNA T +T ++G C   + +   E   ++ +     D  +Y  +I G+C   +++EA  +
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDV 319

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           + +MV++GI P    Y  L     +   +  A+ L ++M  +G+  +    ++ +  LC+
Sbjct: 320 FIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCE 379

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G   E V+ F+  R     LD   YN ++D LCK G+++ A EL   +    +  +VV 
Sbjct: 380 MGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 439

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y  +I G C  G++  A+++F +M+E    PD++T+++L+ GF R     +  ELL  + 
Sbjct: 440 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 499

Query: 550 EKKVMPDASIVSIVVDLL 567
            + + P+++  + +++ L
Sbjct: 500 TQGLKPNSATHNRIIEGL 517



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 25/352 (7%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV--- 282
           A + F Q+K+     +V TY +LI  LC      + + L  E++  G + SV+ F++   
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVLGFDITAL 137

Query: 283 --IMDELCKNRKMDEASRL---LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
             ++ E     + + +S L   LD++V+  VR               +G  + A +    
Sbjct: 138 FDVLREGGGEVEGEHSSVLILVLDMLVKAYVR---------------VGMFDEAIDALFQ 182

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
            +  G     +S N L+N   ++ +++ A+++YR +   G+ P   TY      L     
Sbjct: 183 TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E A+ +F EM+  GV  +  T +T+I+GLC +       E  R LR     +D  AY  
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I G C   +LK A ++F  + +  + P+   Y  +I   C  G + +A  L  DM  N 
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              + +    ++     +   S+V +   + ++  +  D  + +IVVD L K
Sbjct: 363 IKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCK 414



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 145/325 (44%), Gaps = 9/325 (2%)

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
           N+ N A   F ++ + G Q +V T+  ++  LC+ R   +   LL  +V  G + +    
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV--GSKESVL-- 130

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
                GF +    +   E  G +E        +  ++L+  Y +    +EA+    +   
Sbjct: 131 -----GFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKR 185

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           +G  P +++ N L   L E  +++ A+ ++  ++R G+  +  TY  FI  LC+ G   E
Sbjct: 186 RGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           AV++FR +       +    +  I+GLC   R    +E   +L       +   Y  +I+
Sbjct: 246 AVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIR 305

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C++ ++ +A D+F+DM     APD   +  LIH + +     +   L + M    +  
Sbjct: 306 GFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKT 365

Query: 556 DASIVSIVVDLLVKNEISLKSLPSF 580
           +  IVS ++  L +  ++ + +  F
Sbjct: 366 NCVIVSSILQCLCEMGMASEVVDQF 390


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 232/477 (48%), Gaps = 41/477 (8%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG--CEPNVITYNTLING 175
            F  +LR    P+  ++N L+ GL  E+R  EA  L   +   G  C P+V++Y+T+ING
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
             + G         ++M +          PN VTY++II  LCK   VDKA  +   M  
Sbjct: 98  FFKEGD-------LDKMLDQR------ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 144

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + PD +TYNS++HG C +    EA     +M   GV+P VVT+N +MD LCKN +  E
Sbjct: 145 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A ++ D M +RG++P+  TY TL+ G+   G +     L   M   G   +   ++IL+ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            Y K ++VEEA+ ++ +M  +G+ P  VTY T+   L +  +VE A+  F++M  +G+  
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL------- 468
           D+  Y + I  LC      +A ELF  +      L    +N +ID  CK GR+       
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384

Query: 469 ------------------KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
                               A +LF +     LVPN  TY +M + +   G +++   LF
Sbjct: 385 DLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 444

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           L ME+N    D    + ++   ++  E ++    L  + EK    +AS  S+ +DLL
Sbjct: 445 LSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 501



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 197/408 (48%), Gaps = 17/408 (4%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           PP V S++ ++    K    D  L+   + PN+ TYN +I   CK   V         ++
Sbjct: 85  PPDVVSYSTVINGFFKEGDLDKMLDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 143

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           +S   P+  T+NS++ G  +  +  EA     K+++ G EP+V+TYN+L++ LC+ G   
Sbjct: 144 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  +F+ M           KP+  TY T++ G   +G + +   L   M    I+P+  
Sbjct: 204 EARKIFDSMTKRG------LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            ++ L+          EA  +F +M  QG+ P+ VT+  ++D LCK+ ++++A    + M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +  G+RP++  YN+L+   C+  K  +AEELF  M   G     + +N +I+ +CK   V
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            E+  L+  MV  G+KP ++T          + + + A  LF     +G+  +  TY   
Sbjct: 378 IESGKLFDLMVRIGVKPDIIT----------LGRNDEAKDLFVAFSSNGLVPNYWTYRLM 427

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
            + +   G + E  +LF ++    C +D    N ++  L + G +  A
Sbjct: 428 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 475



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 186/414 (44%), Gaps = 46/414 (11%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFC 107
            D ML    SP  V ++N ++A+L K +  D      T +  +G+ P+  TYN +++ FC
Sbjct: 104 LDKMLDQRISPN-VVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
             G+     +   ++      P+  T+NSL+  L    R  EA  +F  +   G +P++ 
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIG------VVC------------------ 203
           TY TL+ G    G  +    L + M              +VC                  
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 204 -----KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                 PN VTY T+ID LCK G V+ A   F QM DE + PD + YNSLIH LC  + W
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
            +A+ LF+EM+D+G+  S + FN I+D  CK  ++ E+ +L DLMV+ GV+P+  T    
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT---- 398

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
                 +G+ + A++LF +  S G   +  +Y ++         +EE   L+  M   G 
Sbjct: 399 ------LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 452

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
                  N +   L +  ++  A      +     + +  T + FID L    Y
Sbjct: 453 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 506



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 167/332 (50%), Gaps = 10/332 (3%)

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFN 281
           + A+ +F ++    I PDV +YN L++GLC  N   EA  L   M D G    P VV+++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            +++   K   +D+       M+ + + PN  TYN+++   C    +++A E+  +M   
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D ++YN +++G+C + + +EA+   ++M S G++P VVTYN+L   L +  +   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            K+FD M + G+  D  TY T + G    G ++E   L   +       +   ++ L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             K  +++ A  +F  +    L PN VTY  +I  LC  G+++ A   F  M +    PD
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
            I ++ LIH     ++  K  EL  +M ++ +
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 10/279 (3%)

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYN 351
           ++A  + D +++RG+ P+  +YN L++G C   +   A EL   M   G  C  D VSY+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +ING+ K  ++++       M+ + I P VVTYN++   L +   V+ A+++   M + 
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  D  TY + + G C +G   EA+   + +R    E D+  YN L+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            ++F S+    L P++ TY  ++QG    G + +   L   M  N   P+   F +L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + +  +  +   +  KM+++ + P+A     V+D+L K+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKS 304



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKG--IKPTVVTYNTLFLGLFEIHQVEHALK 403
           D  SYNIL+NG C     +EAL L   M   G    P VV+Y+T+  G F+   +     
Sbjct: 50  DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL----- 104

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
             D+M    ++ +  TY + I  LCK   + +A+E+  T+       D   YN ++ G C
Sbjct: 105 --DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            SG+ K A      +    + P+VVTYN ++  LC +G+  +AR +F  M +    PD+ 
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
           T+  L+ G+       +++ LL  M    + P+  + SI+V    K E   +++  F   
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 584 ERQG 587
            +QG
Sbjct: 283 RQQG 286


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 247/504 (49%), Gaps = 40/504 (7%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++YT+N++IN +CK+G V        +++++  +P+  T  S I G      +  A  +F
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVF 250

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++       N ++YN LI+GLC  G    A++LF  M +        C PN  TY+ +I
Sbjct: 251 EEMP----NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDD------CCYPNVYTYTALI 300

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            GLC++  V KA  L  +M + N+ PD++TYNSLI G C A   + A RL   M ++G+ 
Sbjct: 301 KGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLV 359

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P   T+   +D LCK+ +++EA RL D + + GV  N   Y+ L+DG+C +GK++ A  L
Sbjct: 360 PDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCL 419

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M S  C  +  ++N LI+G C    ++EALSL+ +MV  G+KPTV T+N L   + +
Sbjct: 420 FEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLK 479

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
               + A K   +M   G     RTY  FI+  C  G + EA ++   ++      D   
Sbjct: 480 QGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFT 539

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL----------------- 497
           Y  LI    K G    A+++  S+      P+  T+  +I+ L                 
Sbjct: 540 YTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVES 599

Query: 498 -CNDG-----------QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
             N G           + D   +LF +ME++   PD   ++ LI G  ++       +LL
Sbjct: 600 VSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLL 659

Query: 546 HKMKEKKVMPDASIVSIVVDLLVK 569
            +M+++ + P   + + V+    K
Sbjct: 660 DQMQKEGISPSEMVFNAVISCCCK 683



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 246/574 (42%), Gaps = 81/574 (14%)

Query: 67  VSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + +FN+++    K       K +  ++   GL P+ +T    I  +C+   V   F    
Sbjct: 192 IYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAF---- 247

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R+       N  ++N LI GL    RI EA +LF ++K   C PNV TY  LI GLCR  
Sbjct: 248 RVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK- 306

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +   A+ L +EM   N        P+ +TY+++I G C+ G +D A  L   MK+  + P
Sbjct: 307 NVHKAMGLLDEMLERN------LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVP 360

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D  TY   I  LC +N   EA+RLF  + ++GV  +V+ ++V++D  CK  K+DEA  L 
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M+ +   PNA T+N L+ G C  G +  A  LF  M  MG K    ++NILI    K 
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT--- 417
            + ++A    ++M+S G KP   TYN          +V+ A  +  +M+ +GV  D    
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540

Query: 418 --------------------------------RTYTTFIDGLCKNGYIIE---------- 435
                                            T+ + I  L    Y++E          
Sbjct: 541 TSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESV 600

Query: 436 -------------------AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
                               +ELF  +    C  D + Y  LI G+CK   L  A +L  
Sbjct: 601 SNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLD 660

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    + P+ + +N +I   C   +  +A ++  DM  +  +P +     LI G     
Sbjct: 661 QMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEG 720

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           E  + N +  K++      D     I++D ++K 
Sbjct: 721 ETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQ 754



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 182/357 (50%), Gaps = 5/357 (1%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ ++  L + G VD+   L+ +M +E ++ D+ T+N +I+  C      EAK+   +M+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+ P   T    +   C+++ +D A R+ + M  R    N  +YN L+ G C  G+I+
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  M+   C  +  +Y  LI G C+ K V +A+ L  EM+ + + P ++TYN+L 
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G      ++ A +L   M+  G+  D RTY  FID LCK+  + EA  LF +L      
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            ++  Y+ LIDG CK G++  A  LF  +      PN  T+N +I GLC+ G + +A  L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           F  M +    P V TF++LI   ++  +    ++ L KM      P A   +  +++
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEV 511



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 168/337 (49%), Gaps = 5/337 (1%)

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           KD+     +  YN L+  L      +E  +L+ EM+++ V   + TFN++++  CK   +
Sbjct: 149 KDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFV 208

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA + +  M+Q G+ P+  T  + + G+C    ++ A  +F  M +     ++VSYN L
Sbjct: 209 KEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN----RNEVSYNQL 264

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+G C+   ++EA+SL+  M      P V TY  L  GL     V  A+ L DEM    +
Sbjct: 265 IHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNL 323

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  TY + I G C+ G++  A  L   ++      D + Y C ID LCKS R++ A  
Sbjct: 324 VPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARR 383

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF SL    +  NV+ Y+++I G C  G++D+A  LF  M     +P+  TF+ LIHG  
Sbjct: 384 LFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLC 443

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                 +   L  +M +  + P     +I++  ++K 
Sbjct: 444 SAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 198/479 (41%), Gaps = 65/479 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNI 101
           ++A  + D ML  +  P  ++ +N L+A   +  H D+       +   GL P+  TY  
Sbjct: 309 HKAMGLLDEMLERNLVPDLIT-YNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGC 367

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I+  CK  RV      F  +     + N   ++ LI G     ++ EA  LF K+ +  
Sbjct: 368 FIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKN 427

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMA--------------------NGNGEIGV 201
           C PN  T+N LI+GLC  G+   AL+LF++M                      G+ +   
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAH 487

Query: 202 VC---------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
            C         KP   TY+  I+  C  G V +A+ + +QMK+E + PD  TY SLI   
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS--------------- 297
                   A  +   M D   +PS  TF  ++ +L   R + E S               
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607

Query: 298 --------------RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
                          L + M + G  P++  Y  L+ G C +  +  A +L   M+  G 
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
              ++ +N +I+  CK ++  EA ++  +M+  G  P +    TL  GL+E  + E    
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +F +++  G   D   +   IDG+ K G + E  +LF  +    C    + Y+ L   L
Sbjct: 728 VFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 168/385 (43%), Gaps = 42/385 (10%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGL 92
           +G   V   +EA C+F+ ML  + SP   + FN L+  L    +    L+        GL
Sbjct: 405 DGYCKVGKVDEAGCLFEKMLSKNCSPNAYT-FNALIHGLCSAGNLKEALSLFDQMVKMGL 463

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P +YT+NILI    K G          +++ S   P A T+N+ I+   +  ++ EA  
Sbjct: 464 KPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAED 523

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +  ++K  G  P+  TY +LI    + G T  A ++ + M + +      C+P+  T+ +
Sbjct: 524 MMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD------CEPSHHTFLS 577

Query: 213 IIDGLCKEGFV-----------------------------DKAKALFLQMKDENINPDVV 243
           +I  L  + +V                             D    LF +M+     PD  
Sbjct: 578 LIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSK 637

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y  LI G+C   +   A +L  +M  +G+ PS + FN ++   CK +K  EA+ +++ M
Sbjct: 638 CYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDM 697

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +  G  P      TL+ G    G+  R   +F  +   G   D++++ ILI+G  K   V
Sbjct: 698 ICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLV 757

Query: 364 EEALSLYREMVSKGIKPTVVTYNTL 388
           EE   L+ EM   G   +  TY+ L
Sbjct: 758 EEFSQLFEEMEKNGCNFSPRTYSIL 782


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 241/494 (48%), Gaps = 18/494 (3%)

Query: 66  PVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL-----GFIAFG 120
           P S  N+LL + A  + + T L    L+  + + ++ I+       +S       F  F 
Sbjct: 416 PSSLPNLLLTASAAVRPHATSLR---LYSRMKSLSLPISTASLHPLLSALPSAPAFALFA 472

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + R        TFN +++ L +  +   A  L  ++      PN +TYNT+I G C  G
Sbjct: 473 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRG 528

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-IN 239
               AL++  EM    G       PN  TY T+I G CK G VD+A  +F +M  +  + 
Sbjct: 529 RVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 583

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+ V YN+LI G C     + A      M+++GV  +V T+N+++  L  + +  EA  L
Sbjct: 584 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 643

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           ++ M  +G+ P+  TYN L++G C  G + +A E+F +M   G +   V+Y  LI    K
Sbjct: 644 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 703

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
             +V+E   L+ E V +GI+P +V YN L         ++ A ++  EM++  +A D  T
Sbjct: 704 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T + GLC  G + EA +L   +     + D+  YN LI G    G +K A  +   + 
Sbjct: 764 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 823

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           +    P ++TYN +IQGLC +GQ D A ++  +M EN   PD  T+  LI G    +E +
Sbjct: 824 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 883

Query: 540 KVNELLHKMKEKKV 553
             +E L      KV
Sbjct: 884 IDDERLAAADAAKV 897



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 237/511 (46%), Gaps = 25/511 (4%)

Query: 67  VSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           V S +  L+ LA   H D    A    PNL     L+     +   +     + R+    
Sbjct: 396 VLSADKALSPLAVLPHLD---GAPSSLPNL-----LLTASAAVRPHATSLRLYSRMKSLS 447

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
              + A+ + L+  L +      A ALF  +          T+N ++  LC  G    AL
Sbjct: 448 LPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 503

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-INPDVVTY 245
            L  +M           +PN VTY+T+I G C  G V  A  +  +M++   I P+  TY
Sbjct: 504 ELLRQMP----------RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 553

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            ++I G C     +EA ++F EM+ +G V+P  V +N ++   C   K+D A    D MV
Sbjct: 554 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 613

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RGV     TYN L+    + G+   A EL   M   G   D  +YNILING+CK   V+
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 673

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +AL ++  M  +G++ TVVTY  L   L +  QV+   KLFDE  R G+  D   Y   I
Sbjct: 674 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +    +G I  A E+   +   +   D   YN L+ GLC  GR+  A +L   +    + 
Sbjct: 734 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++VTYN +I G    G +  A  +  +M      P ++T++ LI G  +  +      +
Sbjct: 794 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 853

Query: 545 LHKMKEKKVMPDASI-VSIVVDLLVKNEISL 574
           + +M E  + PD S  +S++  L  ++E ++
Sbjct: 854 VKEMVENGITPDDSTYISLIEGLTTEDERAI 884



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 195/379 (51%), Gaps = 15/379 (3%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKI 109
           +LR  P P  V+ +N ++A           L+         G+ PN YTY  +I+ +CK+
Sbjct: 505 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 110 GRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           GRV      F  +L +    P A  +N+LI G   + ++  A     ++   G    V T
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++ L   G    A  L EEM       G    P+  TY+ +I+G CKEG V KA  
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMG------GKGLAPDVFTYNILINGHCKEGNVKKALE 677

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F  M    +   VVTY +LI+ L       E  +LF E + +G++P +V +N +++   
Sbjct: 678 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 737

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
            +  +D A  ++  M ++ + P+  TYNTLM G CL+G+++ A +L   M   G + D V
Sbjct: 738 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 797

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LI+GY    +V++AL +  EM++KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 798 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 857

Query: 409 QRDGVAADTRTYTTFIDGL 427
             +G+  D  TY + I+GL
Sbjct: 858 VENGITPDDSTYISLIEGL 876



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 12/257 (4%)

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L+  M+S+       S + L++          A +L+ +M    +     T+N +   L 
Sbjct: 439 LYSRMKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLC 494

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              +   AL+L  +M R        TY T I G C  G +  A+++ R +R        Q
Sbjct: 495 SAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 550

Query: 454 -AYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             Y  +I G CK GR+  A ++F   L  G + P  V YN +I G C+ G++D A  L+ 
Sbjct: 551 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYR 609

Query: 512 D-MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           D M E   A  V T+++L+H        ++  EL+ +M  K + PD    +I+++   K 
Sbjct: 610 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 669

Query: 571 EISLKSLPSFLVQERQG 587
               K+L  F    R+G
Sbjct: 670 GNVKKALEIFENMSRRG 686



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 7/135 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           + AF I   M +   +P  V+ +N L+  L      D        +   G+ P+L TYN 
Sbjct: 743 DRAFEIMGEMEKKRIAPDDVT-YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ +   G V         ++   F P   T+N+LI+GL    +  +A  +  ++   G
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 162 CEPNVITYNTLINGL 176
             P+  TY +LI GL
Sbjct: 862 ITPDDSTYISLIEGL 876


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 237/493 (48%), Gaps = 11/493 (2%)

Query: 69  SFNILLASLAKNKHYDTRL----NATGLFP-NLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           + N LLA L +N   D          G+   ++  +N LI  +C++G          R+ 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                 +   +N+L+ G     ++  A  +   +K  G +PNV TY   I   CRT    
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A +L+E M       GV+   + VT S ++ GLC++G   +A ALF +M      P+ V
Sbjct: 257 EAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHV 310

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY +LI  L  A    E   L  EM+ +GV   +VT+  +MD L K  K DE    L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           +   +  N  TY  L+D  C    ++ AE++   ME      + V+++ +ING+ K   +
Sbjct: 371 LSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A    R M  +GI P VVTY TL  G F+    + AL+++ +M  +GV  +     + 
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSL 490

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           ++GL +NG I EA+ LF+        LD   Y  LIDGL K+G +  A++    L    +
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P+ V YN+ I  LC  G+  +A+ +  +M      PD  T++ +I    R  E +K  +
Sbjct: 551 LPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 544 LLHKMKEKKVMPD 556
           LLH+MK   + P+
Sbjct: 611 LLHEMKMSSIKPN 623



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 236/467 (50%), Gaps = 12/467 (2%)

Query: 64  PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P  V  +N L+A   +    D        +   G+ PN+ TY   I  +C+   V   F 
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            +  ++R+    +  T ++L+ GL  + R  EA ALF ++   G  PN +TY TLI+ L 
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLA 320

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G     L+L  EM +     GVV   + VTY+ ++D L K+G  D+ K        +N
Sbjct: 321 KAGRGKELLSLLGEMVSR----GVVM--DLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           ++ + VTY  LI  LC A++ +EA+++ +EM ++ + P+VVTF+ +++   K   +D+A+
Sbjct: 375 LSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
               +M +RG+ PN  TY TL+DGF      + A E++  M   G + +    + L+NG 
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGL 494

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            +N ++EEA++L+++    G+    V Y TL  GLF+   +  A K   E+    +  D 
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y  FI+ LC  G   EA  +   +R +  + D   YN +I   C+ G    A +L   
Sbjct: 555 VVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +    + PN++TYN ++ GL   G ++KA+ L  +M     +P  +T
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 229/516 (44%), Gaps = 64/516 (12%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L K   Y   +   G+ PN+ TY  LI+ F K          +  +L      N    +S
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDS 489

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ GL    +I EA ALF      G   + + Y TLI+GL + G    A    +E+ + N
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 197 GE---------IGVVC--------------------KPNTVTYSTIIDGLCKEGFVDKAK 227
                      I  +C                    KP+  TY+T+I   C++G   KA 
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            L  +MK  +I P+++TYN+L+ GL       +AK L  EM+  G  PS +T   ++   
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            ++R++D    + + M+  G+  +   YNTL+   C  G   +A  +   M   G   D 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           +++N LI G+CK+  ++ A + Y +M+ + I P + T+NTL  GL  + ++  A  +  E
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M++ G+  +  TY   + G  K    +EA+ L+       CE+  + +            
Sbjct: 790 MEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY-------CEMVGKGF------------ 830

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
                           VP V TYN +I      G M +A++LF DM++    P   T+D+
Sbjct: 831 ----------------VPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           L+ G+ RI   ++V + L  MKEK   P    +S +
Sbjct: 875 LVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFI 910



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 237/493 (48%), Gaps = 6/493 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  TY +LI+  CK   V         +     +PN  TF+S+I G      + +A    
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +K  G  PNV+TY TLI+G  +      AL ++ +M     E+      N     +++
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEV------NKFIVDSLV 491

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +GL + G +++A ALF       ++ D V Y +LI GL  A D   A +   E+MD+ + 
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P  V +NV ++ LC   K  EA  +L  M   G++P+  TYNT++   C  G+  +A +L
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M+    K + ++YN L+ G      VE+A  L  EMVS G  P+ +T+  +     +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +++  L + + M   G+ AD   Y T +  LC +G   +A  +   +       D   
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           +N LI G CKS  L  A+  +  + H  + PN+ T+N ++ GL + G++ +A  + ++ME
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           ++   P+ +T+D+L+ G  + +   +   L  +M  K  +P  S  + ++    K  +  
Sbjct: 792 KSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 575 KSLPSFLVQERQG 587
           ++   F   +++G
Sbjct: 852 QAKELFKDMQKRG 864



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 208/450 (46%), Gaps = 26/450 (5%)

Query: 127 FTP-NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           F P + A+ N+L+   H   R++  A    +       P  + YN L+  L    H   A
Sbjct: 68  FRPADPASLNALLYS-HCRLRLLRPAIALLR----SSRPTTVAYNILLAALSDHAH---A 119

Query: 186 LNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP- 240
             +  EM          CK     + VT +T++ GLC+ G VD A AL    +   I+  
Sbjct: 120 PAVLAEM----------CKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL--ADRGGGIHAL 167

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DV+ +N+LI G C   D   A  +   M  QG+   VV +N ++   C+  ++D A  +L
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D+M + GV PN  TY   +  +C    +  A +L+  M   G   D V+ + L+ G C++
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
               EA +L+REM   G  P  VTY TL   L +  + +  L L  EM   GV  D  TY
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  +D L K G   E  +  R        L+   Y  LID LCK+  +  A ++   +  
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PNVVT++ +I G    G +DKA +    M+E    P+V+T+  LI GF +      
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             E+ H M  + V  +  IV  +V+ L +N
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQN 497



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 41/373 (10%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           +L    + K   T +   GL P+  TYN +I   C+ G  +        +  S   PN  
Sbjct: 566 ILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT------------------------ 168
           T+N+L+ GL     + +A  L  ++ + G  P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 169 -----------YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
                      YNTL+  LC  G T  A  + EEM      +G    P+T+T++ +I G 
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM------LGSGIAPDTITFNALILGH 739

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK   +D A A + QM  +NI+P++ T+N+L+ GL       EA  + IEM   G++P+ 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           +T+++++    K     EA RL   MV +G  P   TYN L+  F   G + +A+ELF  
Sbjct: 800 LTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+  G      +Y+IL++G+ + +   E     ++M  KG  P+  T + +     +   
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGM 919

Query: 398 VEHALKLFDEMQR 410
              A +L   + R
Sbjct: 920 TWQAQRLLKNLYR 932


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 227/475 (47%), Gaps = 15/475 (3%)

Query: 58  LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           +R H  P  V + N +L       S    +     +   G+ P+  ++  L+   C+ G+
Sbjct: 137 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGK 196

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V         + R  F+ + AT   +++ L  + R  + +  F ++   G  PNV+ Y  
Sbjct: 197 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 256

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
            I+GLC+  +   A ++ EEM      +G   KPN  T++T+IDGLCK G+ ++A  LFL
Sbjct: 257 WIDGLCKRRYVKQAFHVLEEM------VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFL 310

Query: 232 QM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           ++ K  +  P+V TY  +I G C       A+ L + M++QG++P+  T+  ++   CK 
Sbjct: 311 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG 370

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
              D A  L++ M Q G  PN  TYN ++DGFC  GKI  A ++     S G K D ++Y
Sbjct: 371 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 430

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            ILI  +CK   +  AL L+  MV  G  P +  Y +L     +  Q+E + K FD+   
Sbjct: 431 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 490

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+    +TYT+ I G CK G    A+ +F  +    C  D   Y  LI GLCK  RL+ 
Sbjct: 491 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 550

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--LDMEENAAAPDVI 523
           A  L+  +    LVP  VT   +    C   +   A  +   LD  +     DV+
Sbjct: 551 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVV 605



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 224/475 (47%), Gaps = 7/475 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + GL   + T N ++    + G        F  + R+   P+  +F +L+     E +
Sbjct: 137 MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGK 196

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E  AL   +  +G   +  T   ++  LC  G        F  M     E G    PN
Sbjct: 197 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML----ETGT--PPN 250

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+  IDGLCK  +V +A  +  +M    + P+V T+ +LI GLC       A RLF+
Sbjct: 251 VVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFL 310

Query: 267 EMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +++     +P+V T+ V++   C+  K+  A  LL  MV++G++PN  TY TL+ G C  
Sbjct: 311 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG 370

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  +RA EL   M+  G   +  +YN +I+G+CK  +++EA  + R   S+G+K   +TY
Sbjct: 371 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 430

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L     +   + +AL LFD M  +G   D   YT+ I   C+   + E+ + F    +
Sbjct: 431 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 490

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +      Q Y  +I G CK GR   A  +F  +       + +TY  +I GLC + ++++
Sbjct: 491 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 550

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           A+ L+  M +    P  +T   L   + R  + S    +L ++ +++ +    +V
Sbjct: 551 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVV 605



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 203/437 (46%), Gaps = 7/437 (1%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
             ++       R+ EAA +  ++++ G    V T N ++     TG  + A  +F+ M  
Sbjct: 115 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 174

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                  VC P+  ++  ++   C+EG V++  AL   M     + D  T   ++  LC 
Sbjct: 175 AG-----VC-PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 228

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
              + +    F  M++ G  P+VV +   +D LCK R + +A  +L+ MV RG++PN  T
Sbjct: 229 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 288

Query: 315 YNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           + TL+DG C +G   RA  LF  + +S   K +  +Y ++I GYC+  ++  A  L   M
Sbjct: 289 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 348

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           V +G+KP   TY TL  G  +    + A +L ++M+++G   +  TY   IDG CK G I
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 408

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA ++ R       + D   Y  LI   CK G + +A +LF  +      P++  Y  +
Sbjct: 409 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 468

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I   C   QM++++  F         P   T+  +I G+ ++   +    +  +M +   
Sbjct: 469 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528

Query: 554 MPDASIVSIVVDLLVKN 570
             D+     ++  L K 
Sbjct: 529 FADSITYGALISGLCKE 545



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 184/416 (44%), Gaps = 45/416 (10%)

Query: 63  SPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +PP V ++   +  L K +      H    +   GL PN+YT+  LI+  CKIG     F
Sbjct: 247 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 306

Query: 117 IAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
             F ++++S  + PN  T+  +I G   E ++  A  L  ++   G +PN  TY TLI G
Sbjct: 307 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 366

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C+ G    A  L  +M    G +     PN  TY+ +IDG CK+G + +A  +      
Sbjct: 367 HCKGGSFDRAFELMNKMKQ-EGFL-----PNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + +  D +TY  LI   C       A  LF  M++ G  P +  +  ++   C+ R+M+E
Sbjct: 421 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 480

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           + +  D  +  G+ P   TY +++ G+C +G+   A  +F  M   GC  D ++Y  LI+
Sbjct: 481 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 540

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR----- 410
           G CK   +EEA +LY  M+ K + P  VT  TL        +   A+ + D + +     
Sbjct: 541 GLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVH 600

Query: 411 ---------------------------DGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
                                      +  A D  TYT FI+   +N     A E+
Sbjct: 601 TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEM 656



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 145/348 (41%), Gaps = 38/348 (10%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNI 101
             AF +F  +++     P V ++ +++        LA+ +    R+   GL PN  TY  
Sbjct: 303 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 362

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI   CK G     F    ++ +  F PN  T+N++I G   + +I EA  +     + G
Sbjct: 363 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 422

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG--------NGEIGVVCK-------- 204
            + + ITY  LI   C+ GH   AL+LF+ M  NG           I   C+        
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 482

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       P   TY+++I G CK G    A  +F +M       D +TY +LI GL
Sbjct: 483 KFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 542

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C  +   EAK L+  M+D+ + P  VT   +  E C+  K   A  +LD + +   R   
Sbjct: 543 CKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK---RQQV 599

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
            T + ++     +G ++ A      +       D  +Y   IN   +N
Sbjct: 600 HTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYEN 647


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/378 (35%), Positives = 206/378 (54%), Gaps = 9/378 (2%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  P +Y +N+L++ FCK G V    + F  I +    P   +FN+LI G      + E
Sbjct: 242 SGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEE 301

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
              L   +++ G  P+V T++ LINGLC+ G       LF+EM  G G +     PN VT
Sbjct: 302 GFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC-GRGLV-----PNGVT 355

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++T+IDG CK G VD A   F  M  + + PD+VTYN+LI+GLC   D  EA+RL  EM 
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G++P  +TF  ++D  CK+  M+ A  +   MV+ G+  +   +  L+ G C  G+++
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  +   M S G K DD +Y ++I+ +CK  +V+    L +EM S G  P VVTYN L 
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALM 535

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  Q+++A  L D M   GVA +  TY   +DG  K+G  ++ V++F + + L   
Sbjct: 536 NGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNSEKGLVT- 593

Query: 450 LDIQAYNCLIDGLCKSGR 467
            D  +Y  L++   K+ +
Sbjct: 594 -DYASYTALVNESSKTSK 610



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 180/327 (55%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P    ++ ++ G CK G V  A+ +F ++    + P VV++N+LI G C + D  E  RL
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M  +GV P V TF+ +++ LCK  ++DE S L D M  RG+ PN  T+ TL+DG C 
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            GK++ A + F  M + G + D V+YN LING CK  +++EA  L  EM + G+KP  +T
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           + TL  G  +   +E AL++   M  +G+  D   +T  I GLC+ G + +A  +   + 
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
               + D   Y  +ID  CK G +K  ++L   +     VP VVTYN ++ GLC  GQM 
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHG 531
            A+ L   M     AP+ IT+++L+ G
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDG 572



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 15/397 (3%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I  + AL+ ++   G  P +  +N L++G C+ G    A  +F+E+           +P 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRG------LRPT 282

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V+++T+I G CK G V++   L   M+ E + PDV T+++LI+GLC     +E   LF 
Sbjct: 283 VVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFD 342

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM  +G+ P+ VTF  ++D  CK  K+D A +   +M+ +GVRP+  TYN L++G C +G
Sbjct: 343 EMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVG 402

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +  A  L   M + G K D +++  LI+G CK+ ++E AL + R MV +GI+   V + 
Sbjct: 403 DLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFT 462

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  GL    +V  A ++  +M   G   D  TYT  ID  CK G +    +L + ++  
Sbjct: 463 ALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSD 522

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
                +  YN L++GLCK G++K A  L  ++ +  + PN +TYNI++ G    G    +
Sbjct: 523 GHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS---S 579

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            D+ +   E     D  ++  L      +NE SK ++
Sbjct: 580 VDVDIFNSEKGLVTDYASYTAL------VNESSKTSK 610



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 190/343 (55%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++++ AL+L++ D    P +  +N L+HG C A D   A+ +F E+  +G++P+VV+FN 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++   CK+  ++E  RL  +M   GV P+  T++ L++G C  G+++    LF  M   G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + V++  LI+G CK  +V+ AL  ++ M+++G++P +VTYN L  GL ++  ++ A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L +EM   G+  D  T+TT IDG CK+G +  A+E+ R +     ELD  A+  LI GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+ GR+  A  +   +      P+  TY ++I   C  G +     L  +M+ +   P V
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGV 528

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +T++ L++G  +  +      LL  M    V P+    +I++D
Sbjct: 529 VTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLD 571



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 161/302 (53%), Gaps = 12/302 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V SFN L++   K+   +        + + G+ P+++T++ LIN  CK GR+  G + 
Sbjct: 281 PTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLL 340

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      PN  TF +LI G     ++  A   F  + A G  P+++TYN LINGLC+
Sbjct: 341 FDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCK 400

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L  EM           KP+ +T++T+IDG CK+G ++ A  +  +M +E I
Sbjct: 401 VGDLKEARRLVNEMTASG------LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGI 454

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D V + +LI GLC     ++A R+  +M+  G +P   T+ +++D  CK   +    +
Sbjct: 455 ELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFK 514

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M   G  P   TYN LM+G C  G++  A+ L  +M ++G   +D++YNIL++G+ 
Sbjct: 515 LLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHS 574

Query: 359 KN 360
           K+
Sbjct: 575 KH 576



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 154/307 (50%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L++E++D G  P +  FNV+M   CK   +  A  + D + +RG+RP   ++NTL+ G C
Sbjct: 235 LYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCC 294

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G +     L G MES G   D  +++ LING CK   ++E   L+ EM  +G+ P  V
Sbjct: 295 KSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGV 354

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+ TL  G  +  +V+ ALK F  M   GV  D  TY   I+GLCK G + EA  L   +
Sbjct: 355 TFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 414

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                + D   +  LIDG CK G ++ A E+   +    +  + V +  +I GLC +G++
Sbjct: 415 TASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRV 474

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             A  +  DM      PD  T+ M+I  F +  +     +LL +M+    +P     + +
Sbjct: 475 HDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNAL 534

Query: 564 VDLLVKN 570
           ++ L K 
Sbjct: 535 MNGLCKQ 541



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 126/241 (52%), Gaps = 1/241 (0%)

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +I R+  L+  +   G       +N+L++G+CK  +V  A  ++ E+  +G++PTVV++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G  +   VE   +L   M+ +GV  D  T++  I+GLCK G + E   LF  +   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               +   +  LIDG CK G++  A + F  +    + P++VTYN +I GLC  G + +A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV-MPDASIVSIVVD 565
           R L  +M  +   PD ITF  LI G  +  +     E+  +M E+ + + D +  +++  
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 566 L 566
           L
Sbjct: 468 L 468



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           T + + G  P+  TY ++I+CFCK G V +GF     +      P   T+N+L+ GL  +
Sbjct: 482 TDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQ 541

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            ++  A  L   +   G  PN ITYN L++G  + G + + +++F      N E G+V  
Sbjct: 542 GQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSS-VDVDIF------NSEKGLVT- 593

Query: 205 PNTVTYSTIID 215
            +  +Y+ +++
Sbjct: 594 -DYASYTALVN 603



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 17/229 (7%)

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYNTLFLGLFEIHQVEHAL 402
           +H   SY  +++  C ++ + +A SL   +VS KG       ++++   +   H   H++
Sbjct: 116 RHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSV 175

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            L               +   I     +G+  +AV+ FR +   K  + I+    L+  +
Sbjct: 176 GL--------------VFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRV 221

Query: 463 CK--SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            +     ++ +W L+  +      P +  +N+++ G C  G +  AR +F ++ +    P
Sbjct: 222 VRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRP 281

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            V++F+ LI G  +  +  +   L   M+ + V PD    S +++ L K
Sbjct: 282 TVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCK 330


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/407 (33%), Positives = 209/407 (51%), Gaps = 8/407 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+  T + +I   CK GRV         +++  + P+ AT + LI  L    +I EA   
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431

Query: 154 FTKL--KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
              +  K      +  +YN+L+N LC+      A  +F  M +    +     P+ V+YS
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV-----PDVVSYS 486

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +IDG CK   + +A+ L+ QM D N  P+V TYN+ ++GL       +A+ ++ EM+  
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAA 546

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G  P V+T++ ++      RK D+A  L + M+ RG RPNA TYN L+ G C   K + A
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            ELF  M   GC  D V+Y  L+ G+C   ++E+A+ ++ EMVSKG  P VV YN L  G
Sbjct: 607 HELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCEL 450
            F   +   A +LF  M       DT ++   IDGL K   + +AVE+F R  +   C  
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 726

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           D+  YN LI GLC   RL  A ++F  +    L P+   +N++++ +
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 260/498 (52%), Gaps = 18/498 (3%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N   +   ++  CK G++   F A  R ++   + +   ++ LI+ L    RI +A    
Sbjct: 304 NNVAWTAFLSGLCKSGKIEQAFEAC-RTMQESLSSSQPVYDMLIRLLIESGRIDKAEEAC 362

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++     +P+  T +++I  LC+ G    AL+L E M          C P+  T+S +I
Sbjct: 363 LEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG-----YC-PDMATHSMLI 416

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVT---YNSLIHGLCHANDWNEAKRLFIEMM-D 270
           + LCK   + +A+  FLQ  D  I+    +   YNSL++ LC A   ++A  +F  M+ +
Sbjct: 417 NELCKADKIQEAQE-FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSE 475

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +   P VV++++++D  CK  ++  A +L   M+     PN  TYN  ++G    G+I  
Sbjct: 476 RSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIAD 535

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A+ ++  M + GC  D ++Y+ LI+G+   ++ ++A  L+  M+S+G +P  VTYN L  
Sbjct: 536 AQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLH 595

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  + + A +LF +M   G   D  TYTT + G C  G I +AVE+F  +     + 
Sbjct: 596 GLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP 655

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D+ AYNCL+ G  ++G+   A +LF  +      P+ V++NIMI GL    ++D A ++F
Sbjct: 656 DVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVF 715

Query: 511 LDMEEN-AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD---- 565
             ME++   +PD++T++ LI G       S+  ++  ++   K+ PD    +++++    
Sbjct: 716 ERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKC 775

Query: 566 -LLVKNEISLKSLPSFLV 582
            ++ + EI  K  P+F V
Sbjct: 776 GIVYQFEIRFKDPPAFNV 793



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 162/630 (25%), Positives = 276/630 (43%), Gaps = 98/630 (15%)

Query: 19  SAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLA 78
           S+ R    +++ H RD              EA   F + L+       V ++N LL  L 
Sbjct: 94  SSCRETVGAVIKHLRD------------GGEALTFFRW-LQARNFKHDVFTYNCLLDKLI 140

Query: 79  KNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           +++          ++ A G+ PN +TY +L+   C           FG ++   F P++ 
Sbjct: 141 RHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSST 200

Query: 133 TFNSLIKGLHA-----------------------------------ESRIMEAAALFTKL 157
            +  + + L A                                   + + +EA+ LF  +
Sbjct: 201 LYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAM 260

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              GC+P+   Y+ ++   C+  +   A  LF EMA     +      N V ++  + GL
Sbjct: 261 VKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMA-----VESKAPLNNVAWTAFLSGL 315

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G +++A      M+ E+++     Y+ LI  L  +   ++A+   +E+  + +QPS 
Sbjct: 316 CKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSS 374

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            T + ++ ELCK  ++D A  LL+ M++RG  P+  T++ L++  C   KI  A+E    
Sbjct: 375 GTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 434

Query: 338 ME-----------------SMGCKH---------------------DDVSYNILINGYCK 359
           M+                 +  CK                      D VSY+ILI+G+CK
Sbjct: 435 MDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCK 494

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
             E+  A  LY++M+     P V TYN    GL    ++  A  +++EM   G + D  T
Sbjct: 495 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVIT 554

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y+T I G        +A ELF T+    C  +   YNCL+ GLCK  +   A ELF  + 
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
                P+ VTY  ++ G CN G++++A ++F +M      PDV+ ++ L+ GF R  +P 
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 674

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +  +L   M  ++  PD    +I++D L K
Sbjct: 675 EAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 177/328 (53%), Gaps = 14/328 (4%)

Query: 70  FNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +N LL SL K K        + T ++     P++ +Y+ILI+ FCKI  +      + ++
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +     PN  T+N+ + GL  + RI +A  ++ ++ A GC P+VITY+TLI+G       
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  LFE M      I   C+PN VTY+ ++ GLCKE   D+A  LF +M +   +PD 
Sbjct: 569 DQAHELFETM------ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDR 622

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTY +L++G C+     +A  +F EM+ +G  P VV +N ++    +  K  EA +L  +
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNK 361
           MV R  +P+  ++N ++DG     +++ A E+F  ME   GC  D V+YN LI G C  +
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLF 389
            + EA+ +++E+    + P    +N L 
Sbjct: 743 RLSEAMKVFKEIDRLKLSPDPHAFNVLL 770



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 16/181 (8%)

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           DG ++   T    I  L   G   EA+  FR L+    + D+  YNCL+D L +   LK 
Sbjct: 91  DGKSSCRETVGAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQ 147

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A ++F  +    +VPN  TY +++Q  C +   D+A   F +M +    P    +  +  
Sbjct: 148 AGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE 207

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
                 +  + + +  +  EK+V          V++++K  +    L +F++Q++  E  
Sbjct: 208 CLKATGKEGEFSRVFGRDLEKRV---------AVEMMLKKAL----LVNFVIQDKAIEAS 254

Query: 591 E 591
           +
Sbjct: 255 K 255



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 8/102 (7%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA-------TGLFPNLYTY 99
           P EA  +F  M+     P  VS  NI++  L+K K  D  +          G  P+L TY
Sbjct: 673 PGEAKQLFQVMVSRQCKPDTVSH-NIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 731

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           N LI   C   R+S     F  I R   +P+   FN L++ +
Sbjct: 732 NSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 240/483 (49%), Gaps = 11/483 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
            ++ +GL PN  TY++LI+  CK G +   F  +  +       +  + NS+++G     
Sbjct: 170 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 229

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
               A  +F      G   NV T+NTL++ LC+ G    A NL++E+      I     P
Sbjct: 230 SWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEV------IAKGISP 282

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N V+Y+ II G C++  ++ A  ++ +M D    P+ VT+  L+ G     D   A  +F
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M D  + P+  T  +I+  LCK  +  E   L +  V +G  P    YNT++DGF   
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G IN A  ++  M  +G     V+Y  LI+G+CK   ++ AL L  +M  KG+K  +  Y
Sbjct: 403 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            TL  G  +   ++ A +L +E++  G++ +   Y + I G      + EA++L++ +  
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 522

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D++ Y  LIDGL KSGRL +A ++   +    ++P+   + ++I GLCN GQ + 
Sbjct: 523 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 582

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           AR +  DM      P V+ ++ LI G  +     +   L  +M ++ ++PD    +I  D
Sbjct: 583 ARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD----NITYD 638

Query: 566 LLV 568
           +LV
Sbjct: 639 ILV 641



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 191/385 (49%), Gaps = 13/385 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNI 101
           NEA  ++D ++    SP  VS  NI+L    K+      K Y   L+  G  PN  T+ I
Sbjct: 266 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD-NGFTPNAVTFTI 324

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ + K G +   F  F R+  +   P   T   +IKGL    R  E   LF K  + G
Sbjct: 325 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG 384

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P  + YNT+I+G  + G+  +A N++ EM     E+G+   P+TVTY+++IDG CK  
Sbjct: 385 FVPTCMPYNTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTVTYTSLIDGFCKGN 438

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D A  L   MK + +  D+  Y +LI G C   D   A  L  E+   G+ P+   +N
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 498

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++        ++EA  L   MV  G+  +  TY +L+DG    G++  A ++   M S 
Sbjct: 499 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 558

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   DD ++ +LING C   + E A  +  +M  K + P+V+ YNTL  G F+   ++ A
Sbjct: 559 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 618

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDG 426
            +L DEM   G+  D  TY   ++G
Sbjct: 619 FRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 144/572 (25%), Positives = 242/572 (42%), Gaps = 98/572 (17%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++   NIL+    +            ++L    T +  T + +++    E  I+EA   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM--------------------A 193
           F + KA G E +   Y+  ++ LC   ++  AL+L  EM                     
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 194 NGNGEIGVVCKPNTV---------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
            GN    +  K + V           ++++ G C +G +  A  L  ++ +  + P+ VT
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS---------------------------- 276
           Y+ LI G C   +  +A   + EM  +G++ S                            
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 277 ------VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
                 V TFN ++  LCK  KM+EA  L D ++ +G+ PN  +YN ++ G C    IN 
Sbjct: 243 ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM----------------- 373
           A +++  M   G   + V++ IL++GY K  ++E A S++  M                 
Sbjct: 303 ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIK 362

Query: 374 ------------------VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
                             VS+G  PT + YNT+  G  +   +  A  ++ EM   G+  
Sbjct: 363 GLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 422

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
            T TYT+ IDG CK   I  A++L   ++    ++DI+AY  LIDG CK   +K A EL 
Sbjct: 423 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 482

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             L    L PN   YN MI G  N   +++A DL+  M       D+ T+  LI G ++ 
Sbjct: 483 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 542

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
                 +++  +M  K ++PD    +++++ L
Sbjct: 543 GRLLYASDIHTEMLSKGILPDDRAHTVLINGL 574



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 187/406 (46%), Gaps = 7/406 (1%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P++   N L+  + R   T  A  L  +M      +GV    +  T   ++    KEG +
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKML----LVGVT--GDCFTLHVMLRACLKEGNI 56

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+  FLQ K   +  D   Y+  +H LC   +   A  L  EM   G  P   TF  +
Sbjct: 57  LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSV 116

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +    K   + EA RL D MV  G   N     +LM G+C+ G +  A  L   +   G 
Sbjct: 117 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 176

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + V+Y++LI+G CKN  +E+A   Y EM +KGI+ +V + N++  G  +    ++A  
Sbjct: 177 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 236

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           +F++    G+ A+  T+ T +  LCK G + EA  L+  +       ++ +YN +I G C
Sbjct: 237 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +   +  A +++  +      PN VT+ I++ G    G ++ A  +F  M++    P   
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           T  ++I G  +     +  +L +K   +  +P     + ++D  +K
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK 401



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 34/366 (9%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P +   N L+  +   N   EA+ L  +M+  GV     T +V++    K   + EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +       RGV  +   Y+  +   CL      A  L   M + G    + ++  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K   V EAL L  +MV+ G    +    +L  G      +  AL L +E+   G+  + 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRI-----------------LKCE----------- 449
            TY+  IDG CKNG I +A E +  ++                  LKC+           
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 450 ------LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  ++  +N L+  LCK G++  A  L+  +    + PNVV+YN +I G C    +
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           + A  ++ +M +N   P+ +TF +L+ G+ +  +      + H+MK+  ++P  + + I+
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 564 VDLLVK 569
           +  L K
Sbjct: 361 IKGLCK 366



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 80/193 (41%)

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           + P++   N L   +   +    A +L ++M   GV  D  T    +    K G I+EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           + F   +    ELD +AY+  +  LC      +A  L   +     +P   T+  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
             +G + +A  L  DM     + ++     L+ G+           L++++ E  ++P+ 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 558 SIVSIVVDLLVKN 570
              S+++D   KN
Sbjct: 181 VTYSVLIDGCCKN 193


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/395 (33%), Positives = 207/395 (52%), Gaps = 6/395 (1%)

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +K  G  P+V++Y+T+ING C  G     L L +EM           KPN  TY++II  
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG------LKPNLYTYNSIILL 54

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK G VD A+ +  +M ++ I PD V Y +LI G C   +   A +LF EM  Q + P 
Sbjct: 55  LCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD 114

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            + +  ++  LC+  KM EA ++ + M  RGV P+  TY TL+DG+C  G++ +A  L  
Sbjct: 115 FIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHN 174

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M   G   + V+Y  L +G CK  +V+ A  L  EM  KG++  + TYN+L  GL +  
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG 234

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +  A+KL +EM+  G+  DT T+TT +D  CK G +++A EL R +     +  +  +N
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFN 294

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            L++G C SG L+    L   +    ++PN  TYN +++  C    M    +++  M   
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
              PD  T+++LI G  +     +   L  +M EK
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK 389



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 221/423 (52%), Gaps = 47/423 (11%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           ++M    P + ++N ++  L K+   D        +   G+ P+   Y  LI+ FCK+G 
Sbjct: 36  MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +   +  F  + +    P+   + ++I GL    ++MEA  +F K+ + G EP+ +TY T
Sbjct: 96  IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI+G C++G    A +L  +M            PN VTY+ + DGLCK G VD A  L  
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSG------LTPNVVTYTALADGLCKLGQVDTANELLH 209

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRL--------------------------- 264
           +M  + +  ++ TYNSL++GLC + +  +A +L                           
Sbjct: 210 EMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTG 269

Query: 265 --------FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
                     EM+D+G+QP+V+TFNV+M+  C +  +++  RLL  M+++G+ PN  TYN
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYN 329

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +LM  +C+   +    E++  M + G   D  +YNILI G+CK + ++EA  L++EM  K
Sbjct: 330 SLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK 389

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
           G   T  +YN++  G F+  ++  A +LF+EM+R+G+AAD   Y  F+D     G +  A
Sbjct: 390 GFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETA 449

Query: 437 VEL 439
           +EL
Sbjct: 450 LEL 452



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 203/360 (56%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ V+YST+I+G C  G + K   L  +M+ + + P++ TYNS+I  LC +   ++A+R+
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             EM++QG+ P  V +  ++D  CK   +  A +L D M ++ + P+   Y  ++ G C 
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            GK+  A+++F  M S G + D+V+Y  LI+GYCK+ E+E+A SL+ +MV  G+ P VVT
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L  GL ++ QV+ A +L  EM   G+  +  TY + ++GLCK+G I +AV+L   + 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +     D   +  L+D  CK+G +  A EL   +    L P V+T+N+++ G C  G ++
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
               L   M E    P+  T++ L+  +   N      E+   M  + VMPD++  +I++
Sbjct: 308 DGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILI 367



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 228/465 (49%), Gaps = 12/465 (2%)

Query: 58  LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           ++     P V S++ ++        L K       +   GL PNLYTYN +I   CK G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V         ++     P+   + +LI G      I  A  LF +++     P+ I Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I GLCR G  M A  +F +M +   E      P+ VTY+T+IDG CK G ++KA +L  
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVE------PDEVTYTTLIDGYCKSGEMEKAFSLHN 174

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           QM    + P+VVTY +L  GLC     + A  L  EM  +G+Q ++ T+N +++ LCK+ 
Sbjct: 175 QMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSG 234

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            + +A +L++ M   G+ P+  T+ TLMD +C  G++ +A EL   M   G +   +++N
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFN 294

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           +L+NG+C +  +E+   L   M+ KGI P   TYN+L       + +    +++  M   
Sbjct: 295 VLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR 354

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           GV  D+ TY   I G CK   + EA  L + +      L   +YN +I G  K  ++  A
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEA 414

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            ELF  +    +  +   YN+ +     +G M+ A +L  +  EN
Sbjct: 415 RELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIEN 459


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 226/445 (50%), Gaps = 8/445 (1%)

Query: 89   ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
              G  P++  YN+LI+ +C+ G +  G +  G +  + F P   T+ SLI  L  +  + 
Sbjct: 1006 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLE 1065

Query: 149  EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
            +  +LF +++  G  PNV  YN++I+ LC       A+ + ++M A+G       C P+ 
Sbjct: 1066 KIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASG-------CDPDI 1118

Query: 208  VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +T++T+I GLC EG V KA+    +     +NP+ ++Y  LIHG C   +   A  L +E
Sbjct: 1119 ITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVE 1178

Query: 268  MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
            MM +G  P VVTF  ++  L    K+ EA  + + M +R V P+   YN L+ G C    
Sbjct: 1179 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1238

Query: 328  INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            +  A+ +   M     + D+  Y  LI+G+ +++ + +A  ++  M  KG+ P +V+ N 
Sbjct: 1239 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNA 1298

Query: 388  LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
            +  G  +   +  A+     M++ G   D  TYTT I G  K G +  A+     +   K
Sbjct: 1299 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1358

Query: 448  CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            C+ ++  Y+ LI+G CK+G    A  LF ++    L PNVVTY I+I  L    ++ +A 
Sbjct: 1359 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAG 1418

Query: 508  DLFLDMEENAAAPDVITFDMLIHGF 532
              F  M  N  +P+ +T   L++G 
Sbjct: 1419 LYFETMLLNHCSPNDVTLHYLVNGL 1443



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 215/440 (48%), Gaps = 6/440 (1%)

Query: 137  LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
            L++GL  E R+ E   L       GC P+V+ YN LI+G CR G     L L  EM   N
Sbjct: 984  LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMET-N 1042

Query: 197  GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            G +     P  VTY ++I+ L K+G ++K  +LFL+M+    +P+V  YNS+I  LC+  
Sbjct: 1043 GFL-----PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCR 1097

Query: 257  DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
               +A  +  +M   G  P ++TFN ++  LC    + +A   L   ++R + PN  +Y 
Sbjct: 1098 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYT 1157

Query: 317  TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
             L+ GFC+ G++  A +L   M   G   D V++  LI+G     +V EAL +  +M  +
Sbjct: 1158 PLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTER 1217

Query: 377  GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
             + P V  YN L  GL +   +  A  + +EM    V  D   Y T IDG  ++  + +A
Sbjct: 1218 QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDA 1277

Query: 437  VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
             ++F  +       DI + N +I G C+ G +  A     ++     +P+  TY  +I G
Sbjct: 1278 RKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 1337

Query: 497  LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
                G ++ A     DM +    P+V+T+  LI+G+ +  +      L   M+ + + P+
Sbjct: 1338 YAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPN 1397

Query: 557  ASIVSIVVDLLVKNEISLKS 576
                +I++  L K +  L++
Sbjct: 1398 VVTYTILIGSLFKKDKVLRA 1417



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 224/501 (44%), Gaps = 56/501 (11%)

Query: 87   LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
            +   G  P L TY  LIN   K G +      F  + +  F+PN   +NS+I  L     
Sbjct: 1039 METNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRS 1098

Query: 147  IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              +A  +  ++ A GC+P++IT+NTLI GLC  GH   A +   E       I     PN
Sbjct: 1099 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLRE------AIRRELNPN 1152

Query: 207  TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             ++Y+ +I G C  G +  A  L ++M      PDVVT+ +LIHGL  A   +EA  +  
Sbjct: 1153 QLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE 1212

Query: 267  EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF---- 322
            +M ++ V P V  +NV++  LCK R +  A  +L+ M+++ V+P+   Y TL+DGF    
Sbjct: 1213 KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 1272

Query: 323  -------------------------------CLMGKINRAEELFGSMESMGCKHDDVSYN 351
                                           C  G ++ A     +M  +GC  D+ +Y 
Sbjct: 1273 NLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYT 1332

Query: 352  ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
             +I+GY K   +  AL    +M+ +  KP VVTY++L  G  +    + A  LF  MQ +
Sbjct: 1333 TVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAE 1392

Query: 412  GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL--------- 462
             ++ +  TYT  I  L K   ++ A   F T+ +  C  +    + L++GL         
Sbjct: 1393 ALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVIN 1452

Query: 463  ---CKSGRLKFAWEL---FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
               C +  +     L   F  L   +  P    YN +I  LC    + +A D    M + 
Sbjct: 1453 SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKK 1512

Query: 517  AAAPDVITFDMLIHGFIRINE 537
               P+ ITF  L++GF  + +
Sbjct: 1513 GYVPNPITFLSLLYGFCSVGK 1533



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 201/439 (45%), Gaps = 10/439 (2%)

Query: 129  PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT--LINGLCRTGHTMIAL 186
            P     N L+K L  + R  +A  L+ ++   G +     Y+T  L+ GLC        L
Sbjct: 941  PEVTHCNRLLKLLVEQRRWDDARKLYDEM--LGKDSGADNYSTCVLVRGLCLERRVEEGL 998

Query: 187  NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
             L E         G  C P+ V Y+ +IDG C+ G + +   L  +M+     P +VTY 
Sbjct: 999  KLIE------ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYG 1052

Query: 247  SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            SLI+ L    D  +   LF+EM  +G  P+V  +N ++D LC  R   +A  +L  M   
Sbjct: 1053 SLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFAS 1112

Query: 307  GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            G  P+  T+NTL+ G C  G + +AE             + +SY  LI+G+C   E+  A
Sbjct: 1113 GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVA 1172

Query: 367  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
              L  EM+ +G  P VVT+  L  GL    +V  AL + ++M    V  D   Y   I G
Sbjct: 1173 SDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISG 1232

Query: 427  LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            LCK   +  A  +   +     + D   Y  LIDG  +S  L  A ++F  + H  + P+
Sbjct: 1233 LCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPD 1292

Query: 487  VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            +V+ N MI+G C  G M +A     +M +    PD  T+  +I G+ +    +     L 
Sbjct: 1293 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 1352

Query: 547  KMKEKKVMPDASIVSIVVD 565
             M ++K  P+    S +++
Sbjct: 1353 DMIKRKCKPNVVTYSSLIN 1371



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 176/371 (47%), Gaps = 5/371 (1%)

Query: 205  PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
            P  + +ST++  L +    D        M      P      +L+     A    +A  +
Sbjct: 870  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM 929

Query: 265  FIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT--LMDG 321
               + +Q G  P V   N ++  L + R+ D+A +L D M+  G    A  Y+T  L+ G
Sbjct: 930  CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEML--GKDSGADNYSTCVLVRG 987

Query: 322  FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
             CL  ++    +L  +    GC    V YN+LI+GYC+  ++   L L  EM + G  PT
Sbjct: 988  LCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPT 1047

Query: 382  VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            +VTY +L   L +   +E    LF EM++ G + + + Y + ID LC      +A+ + +
Sbjct: 1048 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK 1107

Query: 442  TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             +    C+ DI  +N LI GLC  G ++ A           L PN ++Y  +I G C  G
Sbjct: 1108 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1167

Query: 502  QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            ++  A DL ++M      PDV+TF  LIHG +   + S+   +  KM E++V PD +I +
Sbjct: 1168 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1227

Query: 562  IVVDLLVKNEI 572
            +++  L K  +
Sbjct: 1228 VLISGLCKKRM 1238



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 173/368 (47%), Gaps = 1/368 (0%)

Query: 205  PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN-PDVVTYNSLIHGLCHANDWNEAKR 263
            P       ++      G + KA  +  +++++  + P+V   N L+  L     W++A++
Sbjct: 905  PTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 964

Query: 264  LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
            L+ EM+ +       +  V++  LC  R+++E  +L++     G  P+   YN L+DG+C
Sbjct: 965  LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1024

Query: 324  LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              G + R   L G ME+ G     V+Y  LIN   K  ++E+  SL+ EM  +G  P V 
Sbjct: 1025 RRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1084

Query: 384  TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
             YN++   L        A+ +  +M   G   D  T+ T I GLC  G++ +A    R  
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 1144

Query: 444  RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               +   +  +Y  LI G C  G L  A +L   +      P+VVT+  +I GL   G++
Sbjct: 1145 IRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKV 1204

Query: 504  DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             +A  +   M E    PDV  +++LI G  +         +L +M EK V PD  + + +
Sbjct: 1205 SEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1264

Query: 564  VDLLVKNE 571
            +D  +++E
Sbjct: 1265 IDGFIRSE 1272


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 258/535 (48%), Gaps = 28/535 (5%)

Query: 53  IFDYMLRMHPSPPPV---------------SSFNILLASLAKNKHYDTRLN------ATG 91
           I   +L   P  PP+               +SF++LL +LA     D  L         G
Sbjct: 144 ILASLLSARPPAPPLFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLG 203

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
              ++ + N ++N   + G +      F ++ R+   P+  T   + K       ++ A 
Sbjct: 204 CRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHAL 263

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
               ++   G E N++ Y+ ++NG C  G T  A  + + +  G G       PN VTY+
Sbjct: 264 EFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLP-GRG-----FSPNIVTYT 317

Query: 212 TIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            ++ G C E  +++A+ +  ++ K++ +  D   + ++I+G C      +A RL  EM+D
Sbjct: 318 LLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVD 377

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             +Q ++  +N++++  CK  +M EA  +L  M   GVRP+  +YN+L+DG+C  G +N+
Sbjct: 378 SRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNK 437

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E + +M   G     ++YN L+ G+C    +++AL L+  M+ KGI P  ++ +TL  
Sbjct: 438 AFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLD 497

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G F+  + E AL L+ E    G+A +T T+ T I+GLCK   + EA EL   ++  +C  
Sbjct: 498 GFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPP 557

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           DI  Y  L  G CK G +  A  +   L +    P +  +N +I G     Q  K  D+ 
Sbjct: 558 DIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDIL 617

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            +M     +P+ + +  LI G+ +  +      L  +M EK ++P+  I S +V 
Sbjct: 618 FEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVS 672



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 251/512 (49%), Gaps = 34/512 (6%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P+ Y+YN L++ +CK G ++  F  +  +LR+ F     T+N+L+KG  +   
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKP 205
           I +A  L+  +   G  PN I+ +TL++G  ++G T  ALNL++E +A G  +       
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAK------- 522

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           NT T++T+I+GLCK   + +A+ L  +MK     PD++TY +L  G C   D + A R+ 
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRIL 582

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            E+ + G  P++  FN ++      ++  + + +L  M  RG+ PN   Y  L+ G+C  
Sbjct: 583 NELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKE 642

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV--- 382
           G ++ A  L+  M   G   +    + L++ + +  + +EA  + + +V   + P +   
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAP 702

Query: 383 -----------------------VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
                                  + +N +  GL ++ ++E A  L  +++  G  AD  T
Sbjct: 703 RLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFT 762

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y++ I G   +G++  A +L  T+  +    +I  YN LI GLCKSG L  A  LF  L 
Sbjct: 763 YSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLW 822

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + PN +TYN +I   C DG + +A  L   M E    P V T+ +LI+G        
Sbjct: 823 TKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYME 882

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +  +LL +M E  V P+      ++   V+ E
Sbjct: 883 EAIKLLDQMIENNVDPNYVTYWTLIQGYVRCE 914



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 246/578 (42%), Gaps = 103/578 (17%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAES 145
           L   G  PN+ TY +L+  +C    +         I ++     + A F ++I G     
Sbjct: 304 LPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMG 363

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R+ +AA L  ++     + N+  YN +ING C+ G  + A N+  EM       GV  +P
Sbjct: 364 RMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT------GVGVRP 417

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +T +Y++++DG CK+G ++KA   +  M         +TYN+L+ G C     ++A RL+
Sbjct: 418 DTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLW 477

Query: 266 IEMMDQGVQPSVV-----------------------------------TFNVIMDELCKN 290
             M+ +G+ P+ +                                   TFN +++ LCK 
Sbjct: 478 FLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKI 537

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM--------- 341
            +M EA  L+D M Q    P+  TY TL  G+C +G ++RA  +   +E++         
Sbjct: 538 ERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFF 597

Query: 342 --------------------------GCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
                                     G   + V+Y  LI G+CK  ++  A +LY EM+ 
Sbjct: 598 NSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIE 657

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT-------YTTFID--- 425
           KG+ P +   ++L    +   + + A  +   +    +  D             FID   
Sbjct: 658 KGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVA 717

Query: 426 ----------------GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                           GLCK G I +A  L   L+      D   Y+ LI G   SG + 
Sbjct: 718 GGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVD 777

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A++L  ++    L PN+VTYN +I GLC  G++ +A  LF  +     +P+ IT++ LI
Sbjct: 778 VAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLI 837

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
               +    ++  +L  +M E+ + P     SI+++ L
Sbjct: 838 DKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 175/367 (47%), Gaps = 1/367 (0%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  ++  ++  L   G +D A  +F +M+       + + NS+++ L    D      +F
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M   G  P   T  ++    CK + +  A   ++ M + GV  N   Y+ +M+G+C +
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTVVT 384
           G+ N A  +  S+   G   + V+Y +L+ GYC  K +EEA  + +E+  +K +      
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           +  +  G  ++ ++E A +L +EM    +  +   Y   I+G CK G ++EA  +   + 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +    D  +YN L+DG CK G +  A+E + ++         +TYN +++G C+ G +D
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A  L+  M +   AP+ I+   L+ GF +  +  K   L  +   + +  + +  + V+
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 565 DLLVKNE 571
           + L K E
Sbjct: 532 NGLCKIE 538



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 176/423 (41%), Gaps = 58/423 (13%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++ TY  L + +CKIG +         +    F P    FNSLI G     +  +   +
Sbjct: 557 PDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI 616

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTG--HT----------------------------- 182
             ++   G  PN + Y  LI G C+ G  HT                             
Sbjct: 617 LFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYR 676

Query: 183 -------------MIALNLFEEMANGNGEIGVVC-----------KPNTVTYSTIIDGLC 218
                        ++  ++  +++    EIG V                + ++ +I GLC
Sbjct: 677 KGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLC 736

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G ++ AK L   +KD+    D  TY+SLIHG   +   + A  L   M+  G+ P++V
Sbjct: 737 KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIV 796

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++  LCK+ ++  A  L   +  +G+ PNA TYNTL+D  C  G I  A +L   M
Sbjct: 797 TYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G      +Y+ILING C    +EEA+ L  +M+   + P  VTY TL  G      V
Sbjct: 857 IEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESV 916

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI--QAYN 456
           +  +   D+     V A  R        + +   +  A +      +L  ++ I  Q YN
Sbjct: 917 DVPIMPLDQ-STIVVKASPRRAVRRPGSVSRPARLTPAPKASGRDYVLNMQVSITFQQYN 975

Query: 457 CLI 459
           CLI
Sbjct: 976 CLI 978



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 160/338 (47%), Gaps = 1/338 (0%)

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
              +++ L+  L +A   + A ++F EM   G + S+ + N I++ L +   +     + 
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M + G  P+  T   +   +C +  +  A E    M  MG + + V+Y+ ++NGYC+ 
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG-VAADTRT 419
            +  +A  +   +  +G  P +VTY  L  G      +E A  +  E++++  +  D   
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           +   I+G C+ G + +A  L   +   + ++++  YN +I+G CK GR+  A  +   + 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P+  +YN ++ G C  G M+KA + +  M  N  A   +T++ L+ GF  +    
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
               L   M +K + P+    S ++D   K+  + K+L
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKAL 509



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 130/278 (46%), Gaps = 1/278 (0%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +A +++ L+      G+++ A ++F  M ++GC+    S N ++N   +  ++   ++++
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            +M   G  P   T   +     ++  V HAL+  +EM + GV  +   Y   ++G C+ 
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVT 489
           G   +A  +  +L       +I  Y  L+ G C    ++ A  +   +  +  LV +   
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           +  +I G C  G+M+ A  L  +M ++    ++  ++++I+G+ ++    + + +LH+M 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
              V PD    + +VD   K  +  K+  ++    R G
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNG 449


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 241/494 (48%), Gaps = 18/494 (3%)

Query: 66  PVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL-----GFIAFG 120
           P S  N+LL + A  + + T L    L+  + + ++ I+       +S       F  F 
Sbjct: 421 PSSLPNLLLTASAAVRPHATSLR---LYSRMKSLSLPISTASLHPLLSALPSAPAFALFA 477

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + R        TFN +++ L +  +   A  L  ++      PN +TYNT+I G C  G
Sbjct: 478 DMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRG 533

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-IN 239
               AL++  EM    G       PN  TY T+I G CK G VD+A  +F +M  +  + 
Sbjct: 534 RVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 588

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P+ V YN+LI G C     + A      M+++GV  +V T+N+++  L  + +  EA  L
Sbjct: 589 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 648

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           ++ M  +G+ P+  TYN L++G C  G + +A E+F +M   G +   V+Y  LI    K
Sbjct: 649 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 708

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
             +V+E   L+ E V +GI+P +V YN L         ++ A ++  EM++  +A D  T
Sbjct: 709 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T + GLC  G + EA +L   +     + D+  YN LI G    G +K A  +   + 
Sbjct: 769 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 828

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           +    P ++TYN +IQGLC +GQ D A ++  +M EN   PD  T+  LI G    +E +
Sbjct: 829 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 888

Query: 540 KVNELLHKMKEKKV 553
             +E L      KV
Sbjct: 889 IDDERLAAADAAKV 902



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 237/511 (46%), Gaps = 25/511 (4%)

Query: 67  VSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSC 126
           V S +  L+ LA   H D    A    PNL     L+     +   +     + R+    
Sbjct: 401 VLSADKALSPLAVLPHLD---GAPSSLPNL-----LLTASAAVRPHATSLRLYSRMKSLS 452

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
              + A+ + L+  L +      A ALF  +          T+N ++  LC  G    AL
Sbjct: 453 LPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 508

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-INPDVVTY 245
            L  +M           +PN VTY+T+I G C  G V  A  +  +M++   I P+  TY
Sbjct: 509 ELLRQMP----------RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 558

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            ++I G C     +EA ++F EM+ +G V+P  V +N ++   C   K+D A    D MV
Sbjct: 559 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 618

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           +RGV     TYN L+    + G+   A EL   M   G   D  +YNILING+CK   V+
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 678

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +AL ++  M  +G++ TVVTY  L   L +  QV+   KLFDE  R G+  D   Y   I
Sbjct: 679 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           +    +G I  A E+   +   +   D   YN L+ GLC  GR+  A +L   +    + 
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++VTYN +I G    G +  A  +  +M      P ++T++ LI G  +  +      +
Sbjct: 799 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 858

Query: 545 LHKMKEKKVMPDASI-VSIVVDLLVKNEISL 574
           + +M E  + PD S  +S++  L  ++E ++
Sbjct: 859 VKEMVENGITPDDSTYISLIEGLTTEDERAI 889



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 196/379 (51%), Gaps = 15/379 (3%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKI 109
           +LR  P P  V+ +N ++A           L+         G+ PN YTY  +I+ +CK+
Sbjct: 510 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 110 GRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           GRV      F  +L +    P A  +N+LI G   + ++  A     ++   G    V T
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++ L   G    A  L EEM  G G       P+  TY+ +I+G CKEG V KA  
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMG-GKG-----LAPDVFTYNILINGHCKEGNVKKALE 682

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F  M    +   VVTY +LI+ L       E  +LF E + +G++P +V +N +++   
Sbjct: 683 IFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 742

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
            +  +D A  ++  M ++ + P+  TYNTLM G CL+G+++ A +L   M   G + D V
Sbjct: 743 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLV 802

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LI+GY    +V++AL +  EM++KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 803 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 862

Query: 409 QRDGVAADTRTYTTFIDGL 427
             +G+  D  TY + I+GL
Sbjct: 863 VENGITPDDSTYISLIEGL 881



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 12/257 (4%)

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L+  M+S+       S + L++          A +L+ +M    +     T+N +   L 
Sbjct: 444 LYSRMKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLC 499

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
              +   AL+L  +M R        TY T I G C  G +  A+++ R +R        Q
Sbjct: 500 SAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 555

Query: 454 -AYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
             Y  +I G CK GR+  A ++F   L  G + P  V YN +I G C+ G++D A  L+ 
Sbjct: 556 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYR 614

Query: 512 D-MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           D M E   A  V T+++L+H        ++  EL+ +M  K + PD    +I+++   K 
Sbjct: 615 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 674

Query: 571 EISLKSLPSFLVQERQG 587
               K+L  F    R+G
Sbjct: 675 GNVKKALEIFENMSRRG 691



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 7/135 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           + AF I   M +   +P  V+ +N L+  L      D        +   G+ P+L TYN 
Sbjct: 748 DRAFEIMGEMEKKRIAPDDVT-YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ +   G V         ++   F P   T+N+LI+GL    +  +A  +  ++   G
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 162 CEPNVITYNTLINGL 176
             P+  TY +LI GL
Sbjct: 867 ITPDDSTYISLIEGL 881


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 219/440 (49%), Gaps = 10/440 (2%)

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
            F  F  + R        TFN +++ L +  +   A  L  ++      PN +TYNT+I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 80

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G C  G    AL++  EM    G       PN  TY T+I G CK G VD+A  +F +M 
Sbjct: 81  GFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135

Query: 235 DEN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
            +  + P+ V YN+LI G C     + A      M+++GV  +V T+N+++  L  + + 
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 195

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA  L++ M  +G+ P+  TYN L++G C  G + +A E+F +M   G +   V+Y  L
Sbjct: 196 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 255

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I    K  +V+E   L+ E V +GI+P +V YN L         ++ A ++  EM++  +
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
           A D  TY T + GLC  G + EA +L   +     + D+  YN LI G    G +K A  
Sbjct: 316 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           +   + +    P ++TYN +IQGLC +GQ D A ++  +M EN   PD  T+  LI G  
Sbjct: 376 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435

Query: 534 RINEPSKVNELLHKMKEKKV 553
             +E +  +E L      KV
Sbjct: 436 TEDERAIDDERLAAADAAKV 455



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 210/428 (49%), Gaps = 13/428 (3%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A ALF  +          T+N ++  LC  G    AL L  +M           +PN VT
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----------RPNAVT 74

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDEN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           Y+T+I G C  G V  A  +  +M++   I P+  TY ++I G C     +EA ++F EM
Sbjct: 75  YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134

Query: 269 MDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           + +G V+P  V +N ++   C   K+D A    D MV+RGV     TYN L+    + G+
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A EL   M   G   D  +YNILING+CK   V++AL ++  M  +G++ TVVTY +
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   +   +
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D   YN L+ GLC  GR+  A +L   +    + P++VTYN +I G    G +  A 
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI-VSIVVDL 566
            +  +M      P ++T++ LI G  +  +      ++ +M E  + PD S  +S++  L
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434

Query: 567 LVKNEISL 574
             ++E ++
Sbjct: 435 TTEDERAI 442



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 196/379 (51%), Gaps = 15/379 (3%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKI 109
           +LR  P P  V+ +N ++A           L+         G+ PN YTY  +I+ +CK+
Sbjct: 63  LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121

Query: 110 GRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           GRV      F  +L +    P A  +N+LI G   + ++  A     ++   G    V T
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++ L   G    A  L EEM  G G       P+  TY+ +I+G CKEG V KA  
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMG-GKG-----LAPDVFTYNILINGHCKEGNVKKALE 235

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F  M    +   VVTY SLI+ L       E  +LF E + +G++P +V +N +++   
Sbjct: 236 IFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 295

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
            +  +D A  ++  M ++ + P+  TYNTLM G CL+G+++ A +L   M   G + D V
Sbjct: 296 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 355

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LI+GY    +V++AL +  EM++KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 356 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415

Query: 409 QRDGVAADTRTYTTFIDGL 427
             +G+  D  TY + I+GL
Sbjct: 416 VENGITPDDSTYISLIEGL 434



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 6/310 (1%)

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           +H L  A     A  LF +M    +     TFN+++  LC   K    +R L+L+ Q   
Sbjct: 13  LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK---PARALELLRQM-P 68

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           RPNA TYNT++ GFC  G++  A ++   M E  G   +  +Y  +I+G+CK   V+EA+
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 368 SLYREMVSKG-IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            ++ EM++KG +KP  V YN L  G  +  +++ AL   D M   GVA    TY   +  
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           L  +G   EA EL   +       D+  YN LI+G CK G +K A E+F ++    +   
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTY  +I  L   GQ+ +   LF +       PD++ ++ LI+         +  E++ 
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308

Query: 547 KMKEKKVMPD 556
           +M++K++ PD
Sbjct: 309 EMEKKRIAPD 318



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 20/227 (8%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNAT 90
           +EG++      +A  IF+ M R       V ++  L+ +L+K       +K +D  +   
Sbjct: 226 KEGNVK-----KALEIFENMSR-RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR-R 278

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P+L  YN LIN     G +   F   G + +    P+  T+N+L++GL    R+ EA
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++   G +P+++TYNTLI+G    G    AL +  EM N          P  +TY
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG------FNPTLLTY 392

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
           + +I GLCK G  D A+ +  +M +  I PD  TY SLI GL   ++
Sbjct: 393 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 8/225 (3%)

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A +L+ +M    +     T+N +   L    +   AL+L  +M R        TY T I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIA 80

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQ-AYNCLIDGLCKSGRLKFAWELFCS-LPHGVL 483
           G C  G +  A+++ R +R        Q  Y  +I G CK GR+  A ++F   L  G +
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLD-MEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            P  V YN +I G C+ G++D A  L+ D M E   A  V T+++L+H        ++  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           EL+ +M  K + PD    +I+++   K     K+L  F    R+G
Sbjct: 200 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 249/494 (50%), Gaps = 12/494 (2%)

Query: 61  HPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H   P + ++NIL      L  +    +   ++   G  PNL TY +LI   C+IG V  
Sbjct: 345 HGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEE 404

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
               +  ++   F  +  +   L+  L    ++  A  LF +++A G  P++ITY+TLI+
Sbjct: 405 ALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIH 464

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GLC+ G    A+ L+E+M +          PN++ +  I+ GLC++G + +A+  F  + 
Sbjct: 465 GLCKQGEVQQAILLYEKMCSNR------IIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
             N++ D++ YN +I G     +  EA +L+ ++ ++G+ P++VTFN +M   C NRK+ 
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           +A RLLD +   G+ PNA TY TLM+ +C  G +    EL   M++       ++Y ++I
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G CK  +++E+  L  +M + G+ P  V+YNT+     +   +  A +L+D+M    + 
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
             + TY   I+G C  G + +A  L  +L+  K  L+  AY  +I   C  G +  A   
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVY 758

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +       ++  Y+ +I  LC    + +A+  F  M  +   PD   F++L++ F +
Sbjct: 759 FRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQ 818

Query: 535 INEPSKVNELLHKM 548
               +   ELL +M
Sbjct: 819 CGHLNSEFELLAEM 832



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 233/493 (47%), Gaps = 12/493 (2%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V SFN +++   K       K +   +   GL P+ Y+YNILI+  C  G +      
Sbjct: 279 PSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              +      P+  T+N L KG      I  A  +  K+   G  PN++TY  LI G C+
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   AL L++EM +   ++ ++      + + ++  LCK   VD A  LF +M+   +
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSII------SSTVLLGSLCKSRQVDVAFKLFCEMEANGL 452

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD++TY++LIHGLC   +  +A  L+ +M    + P+ +    I+  LC+  K+ +A  
Sbjct: 453 RPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARM 512

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
             D ++   +  +   YN ++DG+   G    A +L+  +   G     V++N L+ G+C
Sbjct: 513 YFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFC 572

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
            N+++ +A  L   +   G++P  VTY TL     E   ++  L+L  EM+   +     
Sbjct: 573 INRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHI 632

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TYT  I GLCK   + E+ +L   +  +    D  +YN +I   CK+  ++ A++L+  +
Sbjct: 633 TYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKM 692

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L P  VTYNI+I G C  G +  A +L + ++      +   +  +I       + 
Sbjct: 693 LLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDV 752

Query: 539 SKVNELLHKMKEK 551
            K      +M EK
Sbjct: 753 DKAVVYFRQMVEK 765



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 248/502 (49%), Gaps = 9/502 (1%)

Query: 67  VSSFNILLASLA-KNKHYDT--RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           + ++N LL +L   N  +D    +  +G   + YT +I+++  C+  R     + F    
Sbjct: 214 IQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTE 273

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
              F P+  +FN+++        +  A + F  +   G  P+  +YN LI+GLC  G   
Sbjct: 274 GKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMG 333

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            AL+L  +M N   E      P+ VTY+ +  G    G ++ A  +  +M  +  NP++V
Sbjct: 334 EALDLKNDMENHGLE------PDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLV 387

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY  LI G C   +  EA +L+ EM+  G Q S+++  V++  LCK+R++D A +L   M
Sbjct: 388 TYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEM 447

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
              G+RP+  TY+TL+ G C  G++ +A  L+  M S     + + +  ++ G C+  ++
Sbjct: 448 EANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKI 507

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            +A   +  +++  +   ++ YN +  G  +      A+KL+ ++   G++    T+ + 
Sbjct: 508 SQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSL 567

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G C N  + +A  L  T+++   E +   Y  L++  C+ G ++   EL   +    +
Sbjct: 568 MYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAI 627

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P  +TY ++I+GLC   ++ ++  L  DM+     PD ++++ +I  F +  +  K  +
Sbjct: 628 GPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQ 687

Query: 544 LLHKMKEKKVMPDASIVSIVVD 565
           L  KM    + P +   +I+++
Sbjct: 688 LYDKMLLHNLEPTSVTYNILIN 709



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 235/497 (47%), Gaps = 77/497 (15%)

Query: 128 TPNAATFNSLI-KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           TP +   +S++  GL  +SR  +A   F   +    +P+V+++NT+++  C+ G   +A 
Sbjct: 242 TPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAK 301

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           + F  M       G++  P+  +Y+ +I GLC  G + +A  L   M++  + PD+VTYN
Sbjct: 302 SFFCMMLKH----GLL--PDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355

Query: 247 -----------------------------------SLIHGLCHANDWNEAKRLFIEMMDQ 271
                                               LI G C   +  EA +L+ EM+  
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G Q S+++  V++  LCK+R++D A +L   M   G+RP+  TY+TL+ G C  G++ +A
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 332 EELFGSMES--------------MG-CKHDDVS--------------------YNILING 356
             L+  M S              MG C+   +S                    YNI+I+G
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           Y K     EA+ LY+++  KGI PT+VT+N+L  G     ++  A +L D ++  G+  +
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYTT ++  C+ G +   +EL   ++          Y  +I GLCK  +L+ + +L  
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLE 655

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    L P+ V+YN +IQ  C    M KA  L+  M  +   P  +T+++LI+GF    
Sbjct: 656 DMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYG 715

Query: 537 EPSKVNELLHKMKEKKV 553
           +    + LL  ++ +KV
Sbjct: 716 DLKDADNLLVSLQNRKV 732



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 215/459 (46%), Gaps = 74/459 (16%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH--------------- 250
           + V +  +     +   V  A  + ++MKD N    + TYNSL++               
Sbjct: 178 SNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEI 237

Query: 251 -----------------GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
                            GLC  + + +A   F +   +  QPSVV+FN IM   CK   +
Sbjct: 238 KVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFV 297

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI- 352
           D A     +M++ G+ P+A +YN L+ G C+ G +  A +L   ME+ G + D V+YNI 
Sbjct: 298 DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL 357

Query: 353 ----------------------------------LINGYCKNKEVEEALSLYREMVSKGI 378
                                             LI G+C+   VEEAL LY+EM+S G 
Sbjct: 358 AKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGF 417

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           + ++++   L   L +  QV+ A KLF EM+ +G+  D  TY+T I GLCK G + +A+ 
Sbjct: 418 QLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAIL 477

Query: 439 LFRTL---RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           L+  +   RI+   L    +  ++ GLC+ G++  A   F  L    L  +++ YNIMI 
Sbjct: 478 LYEKMCSNRIIPNSL---IHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMID 534

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G    G   +A  L+  + E   +P ++TF+ L++GF    + S+   LL  +K   + P
Sbjct: 535 GYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEP 594

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           +A   + ++++  + E +++SL   L + +   +G +++
Sbjct: 595 NAVTYTTLMNVYCE-EGNMQSLLELLSEMKAKAIGPTHI 632



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 6/338 (1%)

Query: 75  ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
             +++ + Y   L  + L  ++  YNI+I+ + K G        + ++     +P   TF
Sbjct: 505 GKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTF 564

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           NSL+ G     ++ +A  L   +K  G EPN +TY TL+N  C  G+    L L  EM  
Sbjct: 565 NSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKA 624

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
               IG    P  +TY+ +I GLCK+  + ++  L   M    + PD V+YN++I   C 
Sbjct: 625 K--AIG----PTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
           A D  +A +L+ +M+   ++P+ VT+N++++  C    + +A  LL  +  R V  N   
Sbjct: 679 ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYA 738

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y T++   C  G +++A   F  M   G +     Y+ +I   CK   V EA   +  M+
Sbjct: 739 YTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMML 798

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           S G+ P    +  L     +   +    +L  EM + G
Sbjct: 799 SDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 28/297 (9%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR---GVRPNACTYNTLMDGFCLMGKI 328
           G Q S  +  V+   L + ++++E   +LD M+     G  P+ C               
Sbjct: 121 GFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLC--------------- 165

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
              E L GS  S      +V +++L   Y ++  V +AL +  +M       ++ TYN+L
Sbjct: 166 ---ELLLGSFRSW--DSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSL 220

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L+ +        +++E++  G      T +  +DGLC+     +AV  F+     + 
Sbjct: 221 ---LYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEF 277

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           +  + ++N ++   CK G +  A   FC  L HG+L P+  +YNI+I GLC  G M +A 
Sbjct: 278 QPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLL-PDAYSYNILIHGLCIAGSMGEAL 336

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           DL  DME +   PD++T+++L  GF  +   +    ++ KM  K   P+    ++++
Sbjct: 337 DLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLI 393


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 247/538 (45%), Gaps = 38/538 (7%)

Query: 57  MLRMHP-SPPPVSSF--NILLASLAKNKHYDTRLNATGLFPNLY----------TYNILI 103
           +LR+H  SPPP+  F      + L     Y        LF ++Y          TYN LI
Sbjct: 77  VLRLHALSPPPLRPFFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALI 136

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
              C+   +         ++RS + P+A TFNSLI G     ++  A  LF K+   G  
Sbjct: 137 RALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFS 196

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMAN----------------GNGEIGVV----- 202
            + ++Y  LI G C  G    AL LF EM                  G GE G+      
Sbjct: 197 QDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKM 256

Query: 203 ----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                +P T  Y+ ++D  C+E   ++A+ +  +M D  + P VVT   +++  C     
Sbjct: 257 KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRM 316

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           + A R+F  M  +G +P+V T+N I+   C   K+ +A  LLD M + GV P+  TYN L
Sbjct: 317 SGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLL 376

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           + G C+ G I  A  L   ME  G   D  +YN+LI+  CK  +V+EA SL+  +  +GI
Sbjct: 377 IRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +P  VT+NT+  GL +  + + A    + M   G A DT TY+ FI+ LCK     E + 
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLF 496

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
               +     +     Y  +I+ L        A  ++  +      P+VVTY   ++  C
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYC 556

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           N+G++D+A ++  +M++     D + ++ LI G   I +  +   +L  M     MP+
Sbjct: 557 NEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 256/574 (44%), Gaps = 52/574 (9%)

Query: 49  EAFCIFDYM--LRMHPSPPPVSSFNILLASLAKNKHYDTRLNA---TGLFPNLYTYNILI 103
           E  C+   M  L   P+    ++   L     K +  +  LN    +GL P + T  I++
Sbjct: 248 EGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVV 307

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N +C+ GR+S     F  +      PN  T+N++++G     ++ +A AL  +++  G E
Sbjct: 308 NAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVE 367

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE----------IGVVCK--------- 204
           P+V+TYN LI G C  GH   A  L   M  GNG           I  +CK         
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLM-EGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      PN+VT++T+I+GLCK G  D A      M      PD  TY+  I  LC
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLC 486

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                 E      EM+ + V+PS V + ++++ L   R    A+R+   MV +G  P+  
Sbjct: 487 KTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVV 546

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY T +  +C  G+++ AE +   M+      D ++YN LI+G+    + + A+++ + M
Sbjct: 547 TYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM 606

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHA----------------LKLFDEMQRDGVAADT 417
                 P   T+  L   L +    EH                  +LF+ M+++ V +  
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSA 666

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
           RTY + ++G  +   + E   L   ++     L+   YN L++  CK      AW L CS
Sbjct: 667 RTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCS 726

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +PN++ Y  ++ GL  +GQ D+A+++F          D I + ++I GFIR   
Sbjct: 727 MIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGH 786

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
               ++++  +++ K  P     +++ + L   E
Sbjct: 787 ADMCHDMISMLEQMKCKPSDETYAMLTEELPTRE 820



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 173/644 (26%), Positives = 272/644 (42%), Gaps = 92/644 (14%)

Query: 9   RSFSFASAPISAFRSN-FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPV 67
           R  + +  P+  F    F SLL HF            +TP     +F +M R  P  P  
Sbjct: 79  RLHALSPPPLRPFFDRPFRSLLTHFSRY--------ALTP-LMLRLFAHMYRHAPPAPTG 129

Query: 68  SSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL------- 114
           +++N L+ +L +       + Y + +  +G  P+ +T+N LI  +C+  ++ +       
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCK 189

Query: 115 ------------------GFIAFGRI------LRSCFTPNAATFNSLIKGLHAESRIMEA 150
                             GF   GRI       R    P+  T  +L+KGL    R  E 
Sbjct: 190 MPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEG 249

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG--------------- 195
             +  K+K  G  P    Y  L++  CR      A  +  EM +                
Sbjct: 250 LCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNA 309

Query: 196 -------NGEIGVV-------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                  +G + V        C+PN  TY+ I+ G C  G V KA AL  QM++  + PD
Sbjct: 310 YCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPD 369

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           VVTYN LI G C       A RL   M   G+     T+NV++D LCK  K+DEA  L D
Sbjct: 370 VVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            +  RG+RPN+ T+NT+++G C  GK + A     +M S G   D  +Y+  I   CK K
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTK 489

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
             +E L    EM+ K +KP+ V Y  +   LF       A +++ +M   G + D  TYT
Sbjct: 490 GSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYT 549

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T +   C  G + EA  +   ++  +  +D  AYN LIDG    G+   A  +   +   
Sbjct: 550 TSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGV 609

Query: 482 VLVPNVVTYNIMI----------------QGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
             +PN  T+ I++                  +    ++    +LF  M++N+      T+
Sbjct: 610 ASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTY 669

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             ++ GF       +V  L+  MKE+ +  +  I + +V+   K
Sbjct: 670 LSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCK 713



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 189/427 (44%), Gaps = 12/427 (2%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           + +L+    R   T + L LF  M            P   TY+ +I  LC+   +  A+ 
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPP-----APTGATYNALIRALCRRADLRHAQR 150

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
               M      PD  T+NSLI G C       A  LF +M  +G     V++  +++  C
Sbjct: 151 YLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFC 210

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +  ++DEA  L   M Q    P+  T+  L+ G C  G+      +   M+ +G +    
Sbjct: 211 EAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTR 266

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y  L++ +C+ ++ EEA  +  EM   G+ P VVT   +        ++  A+++F+ M
Sbjct: 267 AYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +  G   +  TY   + G C  G + +A+ L   +R    E D+  YN LI G C  G +
Sbjct: 327 RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+ L   +    L  +  TYN++I  LC  G++D+A  LF  +E     P+ +TF+ +
Sbjct: 387 GSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER-QG 587
           I+G  +  +       L  M      PD    S  ++ L K + S + L  F + E  Q 
Sbjct: 447 INGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGL--FFIDEMLQK 504

Query: 588 EVGESNV 594
           +V  S V
Sbjct: 505 DVKPSTV 511


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 235/498 (47%), Gaps = 20/498 (4%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ ++   PN+ TY IL++   + G++         ++     PN   FNSLI       
Sbjct: 304 RMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSR 363

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA--LNLFEEMANGNGEIGVVC 203
               A  LF K+   GC+P  + YN  I  +C       +  L+L E+  +   ++GVV 
Sbjct: 364 DYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVL 423

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
             N V  S     LC  G  D+A  +  +M  +   PD  TY+ +I  LC A+   +A  
Sbjct: 424 --NKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFS 481

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           LF EM   G+ PSV T+ +++D  CK   + +A +  D M+ +G  PN  TY  L+  + 
Sbjct: 482 LFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYL 541

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM--------VS 375
              ++  A+ELF  M   GCK + V+Y  LI+G+CK  ++E+A  +Y  M        + 
Sbjct: 542 KAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMD 601

Query: 376 KGIK--------PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           K  K        P V+TY  L  GL + ++V+ A +L D M   G   +   Y   IDG 
Sbjct: 602 KYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGF 661

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK G + +A E+F  +       ++  Y+  ID L K  RL    ++   +      PNV
Sbjct: 662 CKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNV 721

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V Y  M+ GLC  G+ D+A  L L MEE    P+V+T+  +I GF +  +  +  EL   
Sbjct: 722 VIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRD 781

Query: 548 MKEKKVMPDASIVSIVVD 565
           M  K   P+     ++++
Sbjct: 782 MCSKGCAPNFITYRVLIN 799



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 272/582 (46%), Gaps = 77/582 (13%)

Query: 55  DYMLRMHPSP--PPVSSFNILLA------SLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
           D + RM  S   P V ++ ILL+       L + K   + +   G +PN   +N LI+ +
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAY 359

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFN------------------SLIKGLHAE---- 144
           CK    S  +  F ++++    P    +N                   L++  ++E    
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDL 419

Query: 145 ------------SRIMEAAALFTKLKAFGCE-------PNVITYNTLINGLCRTGHTMIA 185
                       +R +  A  F +     CE       P+  TY+ +I  LC       A
Sbjct: 420 GVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKA 479

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
            +LFEEM       G+V  P+  TY+ +ID  CK G + +A+  F +M  +   P+VVTY
Sbjct: 480 FSLFEEMKRN----GIV--PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTY 533

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            +LIH    A     A  LF  M+ +G +P+VVT+  ++D  CK  ++++A ++   M  
Sbjct: 534 TALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-- 591

Query: 306 RG------------------VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           RG                    PN  TY  L+DG C   ++  A EL  +M + GC+ + 
Sbjct: 592 RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQ 651

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           + Y+ +I+G+CK  ++++A  ++ +M  +G  P + TY++    LF+ ++++  LK+  +
Sbjct: 652 IVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSK 711

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M  +    +   YT  +DGLCK G   EA +L   +    C  ++  Y  +IDG  KSG+
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           ++   ELF  +      PN +TY ++I   C++G +D+A  L  +M++      +++   
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRK 831

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +I GF +  E      LL ++ E + +P  S+  I++D  +K
Sbjct: 832 IIEGFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIK 871



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 254/560 (45%), Gaps = 67/560 (11%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           RL   G  P+  TYN LI  F +  ++   ++    +L   F  +  T +     L    
Sbjct: 201 RLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGG 260

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +  EA  L  + + F   P+ + YN +++GLC       A+++   M + +      C P
Sbjct: 261 KCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSS------CIP 312

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N VTY  ++ G  ++G + + K +   M  E   P+   +NSLIH  C + D++ A +LF
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNR---------------------------------- 291
            +M+  G QP  + +N+ +  +C N                                   
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432

Query: 292 -------KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
                  K D+A +++  M+ +G  P+  TY+ ++   C   K+ +A  LF  M+  G  
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
               +Y ILI+ +CK   +++A   + EM+ KG  P VVTY  L     +  Q+  A +L
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR--ILKCELD----------- 451
           F+ M  +G   +  TYT  IDG CK G I +A +++  +R  I   ++D           
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE 612

Query: 452 ---IQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              +  Y  L+DGLCK+ R+K A EL  + L HG   PN + Y+ +I G C  G++  A+
Sbjct: 613 GPNVITYGALVDGLCKANRVKEAHELLDTMLAHGC-EPNQIVYDAVIDGFCKIGKLQDAQ 671

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           ++F  M E   +P++ T+   I    + N    V ++L KM E    P+  I + +VD L
Sbjct: 672 EVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGL 731

Query: 568 VKNEISLKSLPSFLVQERQG 587
            K   + ++    L  E +G
Sbjct: 732 CKIGKTDEAYKLMLKMEEKG 751



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 161/587 (27%), Positives = 263/587 (44%), Gaps = 78/587 (13%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------------KHYDTRLNATGLFPNL 96
           A+ +F  M++    P  +  +NI + S+  N             K Y   L+  G+  N 
Sbjct: 368 AYKLFKKMIKCGCQPGYLV-YNIFIGSVCSNEEQPSSDILDLVEKAYSEMLD-LGVVLNK 425

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
              +    C C  G+    F     ++   F P+ +T++ +I  L   S++ +A +LF +
Sbjct: 426 VNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEE 485

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           +K  G  P+V TY  LI+  C+ G    A   F+EM +        C PN VTY+ +I  
Sbjct: 486 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG------CTPNVVTYTALIHA 539

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-------- 268
             K   +  A  LF  M  E   P+VVTY +LI G C A    +A +++  M        
Sbjct: 540 YLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSD 599

Query: 269 MDQGVQ--------PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           MD+  +        P+V+T+  ++D LCK  ++ EA  LLD M+  G  PN   Y+ ++D
Sbjct: 600 MDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVID 659

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           GFC +GK+  A+E+F  M   G   +  +Y+  I+   K+  ++  L +  +M+     P
Sbjct: 660 GFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTP 719

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VV Y  +  GL +I + + A KL  +M+  G   +  TYT  IDG  K+G I + +ELF
Sbjct: 720 NVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELF 779

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-----PHGVL------------ 483
           R +    C  +   Y  LI+  C +G L  A++L   +     P  +L            
Sbjct: 780 RDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE 839

Query: 484 ----------------VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP-----DV 522
                           VP    Y I+I      G+++ A DL   +EE +++P     + 
Sbjct: 840 FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDL---LEEISSSPSHAVSNK 896

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +  LI      ++  K  EL   M  K V+P+ SI+  ++  L+K
Sbjct: 897 YLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIK 943



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 223/473 (47%), Gaps = 55/473 (11%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P++YTY ILI+ FCK G +      F  +L    TPN  T+ +LI       +
Sbjct: 486 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQ 545

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-- 204
           +  A  LF  +   GC+PNV+TY  LI+G C+ G    A  ++  M  G+ E   + K  
Sbjct: 546 MPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYF 604

Query: 205 ---------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                    PN +TY  ++DGLCK   V +A  L   M      P+ + Y+++I G C  
Sbjct: 605 KLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKI 664

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
               +A+ +F +M ++G  P++ T++  +D L K+ ++D   ++L  M++    PN   Y
Sbjct: 665 GKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIY 724

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
             ++DG C +GK + A +L   ME  GC  + V+Y  +I+G+ K+ ++E+ L L+R+M S
Sbjct: 725 TEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCS 784

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR--------------DGVAADTRTYT 421
           KG  P  +TY  L         ++ A KL DEM++              +G + +  T  
Sbjct: 785 KGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSI 844

Query: 422 TFIDGLCKNGYIIEAVELFRTLRIL----------KCELDI---------------QAYN 456
             +D L +N    E+V +    RIL          +  LD+                 Y 
Sbjct: 845 GLLDELSEN----ESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYA 900

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            LI+ L  + ++  A EL+ S+    +VP +     +I+GL    +  +A  L
Sbjct: 901 SLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 193/445 (43%), Gaps = 95/445 (21%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFC 107
           FD ML      P V ++  L+ +  K K           +   G  PN+ TY  LI+  C
Sbjct: 518 FDEMLH-KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576

Query: 108 KIGRVSLGFIAFGRIL----------------RSCFTPNAATFNSLIKGLHAESRIMEAA 151
           K G++      + R+                  +C  PN  T+ +L+ GL   +R+ EA 
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN----------------- 194
            L   + A GCEPN I Y+ +I+G C+ G    A  +F +M+                  
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 195 -GNGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             +  + +V           C PN V Y+ ++DGLCK G  D+A  L L+M+++  NP+V
Sbjct: 697 FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTY ++I G   +    +   LF +M  +G  P+ +T+ V+++  C N  +DEA +LLD 
Sbjct: 757 VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 303 MVQRGVRPNACTYNTLMDGFC--LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK- 359
           M Q     +  ++  +++GF    +  I   +EL    ES+     D  Y ILI+ Y K 
Sbjct: 817 MKQTYWPKHILSHRKIIEGFSQEFITSIGLLDEL-SENESVPV---DSLYRILIDNYIKA 872

Query: 360 ----------------------NK--------------EVEEALSLYREMVSKGIKPTVV 383
                                 NK              +V++AL LY  M+SK + P + 
Sbjct: 873 GRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELS 932

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEM 408
               L  GL ++ + + AL+L D +
Sbjct: 933 ILVHLIKGLIKVDKWQEALQLSDSI 957



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 170/402 (42%), Gaps = 59/402 (14%)

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI----------------------- 249
           ++   C+ G+ + A     ++KD    P   TYN+LI                       
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241

Query: 250 ------------HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
                       + LC      EA  L  E  D    P  V +N ++  LC+    +EA 
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAM 299

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +L  M      PN  TY  L+ G    G++ R + +   M + GC  +   +N LI+ Y
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAY 359

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD-------EMQR 410
           CK+++   A  L+++M+  G +P  + YN +F+G    ++ + +  + D       EM  
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYN-IFIGSVCSNEEQPSSDILDLVEKAYSEMLD 418

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-------DIQAYNCLIDGLC 463
            GV  +    + F   LC  G   +A ++        CE+       D   Y+ +I  LC
Sbjct: 419 LGVVLNKVNVSNFARCLCGAGKFDQAFKII-------CEMMGKGFVPDDSTYSKVIGFLC 471

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
            + +++ A+ LF  +    +VP+V TY I+I   C  G + +AR  F +M      P+V+
Sbjct: 472 DASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVV 531

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           T+  LIH +++  +    +EL   M  +   P+    + ++D
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 146/382 (38%), Gaps = 43/382 (11%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
             +++KD++        N L+   C    WN A      + D G +PS  T+N ++    
Sbjct: 163 FLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFL 222

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +  K+D A  +   M+      +  T +      C  GK   A +L    E      D V
Sbjct: 223 RADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDF--VPDTV 280

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
            YN +++G C+    EEA+ +   M S    P VVTY  L  G     Q+    ++   M
Sbjct: 281 FYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMM 340

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG------- 461
             +G   +   + + I   CK+     A +LF+ +    C+     YN  I         
Sbjct: 341 ITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQ 400

Query: 462 ----------------------------------LCKSGRLKFAWELFCSLPHGVLVPNV 487
                                             LC +G+   A+++ C +     VP+ 
Sbjct: 401 PSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDD 460

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            TY+ +I  LC+  +++KA  LF +M+ N   P V T+ +LI  F +     +  +   +
Sbjct: 461 STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDE 520

Query: 548 MKEKKVMPDASIVSIVVDLLVK 569
           M  K   P+    + ++   +K
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLK 542



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 2/221 (0%)

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N L+   C+N     AL     +   G KP+  TYN L        +++ A  +  EM  
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
                D  T + F   LCK G   EA +L           D   YN ++ GLC++   + 
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFV--PDTVFYNRMVSGLCEASLFEE 297

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A ++   +     +PNVVTY I++ G    GQ+ + + +   M      P+   F+ LIH
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            + +  + S   +L  KM +    P   + +I +  +  NE
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNE 398



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 29/244 (11%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+  Y  +++  CKIG+    +    ++      PN  T+ ++I G     +I +   L
Sbjct: 719 PNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLEL 778

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG---------------- 197
           F  + + GC PN ITY  LIN  C  G    A  L +EM                     
Sbjct: 779 FRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ 838

Query: 198 ----EIGVVCK-------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP--DVVT 244
                IG++ +       P    Y  +ID   K G ++ A  L  ++     +   +   
Sbjct: 839 EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYL 898

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           Y SLI  L HA+  ++A  L+  M+ + V P +     ++  L K  K  EA +L D + 
Sbjct: 899 YASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSIC 958

Query: 305 QRGV 308
           Q  +
Sbjct: 959 QMDI 962


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 240/471 (50%), Gaps = 11/471 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +  +I C+ +      G   F RI      P+   +N ++  L +++      AL+  +K
Sbjct: 112 FQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMK 171

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
           + G EPNV TYN L+  LC+ G    A  L  EM+N        C P+ V+Y+T+I  +C
Sbjct: 172 SEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKG------CDPDDVSYTTVISSMC 225

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G VDKA+ L ++ +     P V  YN+LIHG+C    + EA  L  EM+D+GV P+V+
Sbjct: 226 KLGDVDKARELAMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVI 280

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           +++ ++  L     ++ +  +   M  RG RPN  T+ +L+ GF + G++  A  L+  M
Sbjct: 281 SYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM 340

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G   + V+YN LI+G C +  ++EA+S++ +M    I+P V TY+T+  G  +   +
Sbjct: 341 IREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDL 400

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
             A + +++M   G   +   YT  +D LC+     +A +L   +    C   +  +N  
Sbjct: 401 VSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNF 460

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
           I GLC++GR+++A  +   +     +PN+ TYN ++ GL       +A  L  ++EE   
Sbjct: 461 IKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKV 520

Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             D +T++ +++GF       +V +LL KM    +  D   V+  V+   K
Sbjct: 521 EFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCK 571



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 246/515 (47%), Gaps = 45/515 (8%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKI 109
           Y +R     P V  +N++L +L     +         + + GL PN++TYN+L+   C+ 
Sbjct: 133 YRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQN 192

Query: 110 GRV------------------------------SLGFIAFGRILRSCFTPNAATFNSLIK 139
           G+V                               LG +   R L   F P    +N+LI 
Sbjct: 193 GKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIH 252

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGE 198
           G+  E R  EA  L  ++   G +PNVI+Y+T+I+ L   G+  ++L +F  M   G   
Sbjct: 253 GVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG--- 309

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
               C+PN  T++++I G    G V  A  L+  M  E ++P+VV YN+LIHGLC   + 
Sbjct: 310 ----CRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA  ++ +M    ++P+V T++ I+    K+  +  A    + M+  G RPN   Y  +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +D  C M   ++A +L  +M S GC    +++N  I G C+   VE A+++  +M     
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYEC 485

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P + TYN L  GLF  +    A  L  E++   V  D  TY T + G   NG   + ++
Sbjct: 486 LPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQ 545

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGL 497
           L   + +   +LD    N  ++  CK G++K A ++  ++        +++T+ I++ G+
Sbjct: 546 LLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGI 605

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           CN    ++A     +M +    P++ T+++L+ GF
Sbjct: 606 CNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 197/393 (50%), Gaps = 11/393 (2%)

Query: 178 RTGHTMIA-LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           R  H +++ L  F+ ++N         K   +TY T+ID L +   +D    L  QMK E
Sbjct: 49  RQEHDIVSSLEYFKSLSNSG-----TFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           N+      +  +I     +N   +  ++F  + + G +PSV  +N+++D L         
Sbjct: 104 NVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
           + L + M   G+ PN  TYN L+   C  GK++ A +L   M + GC  DDVSY  +I+ 
Sbjct: 164 NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
            CK  +V++A    RE+  K  +P V  YN L  G+ +  + + A  L +EM   GV  +
Sbjct: 224 MCKLGDVDKA----RELAMK-FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPN 278

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             +Y+T I  L   G +  ++ +F  + +  C  ++Q +  LI G    GR+  A  L+ 
Sbjct: 279 VISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWN 338

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    + PNVV YN +I GLC+DG MD+A  ++  ME+++  P+V T+  +I+GF +  
Sbjct: 339 LMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSG 398

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +     E  +KM      P+  + + +VD+L +
Sbjct: 399 DLVSACETWNKMINCGCRPNVVVYTCMVDVLCQ 431



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 171/400 (42%), Gaps = 71/400 (17%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  +N L+  + K   +    +        G+ PN+ +Y+ +I+C   +G V L    
Sbjct: 242 PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAV 301

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FGR+      PN  TF SLIKG     R+ +A  L+  +   G  PNV+ YNTLI+GLC 
Sbjct: 302 FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCS 361

Query: 179 TGHTMIALNLFEEMA-----------------------------NGNGEIGVVCKPNTVT 209
            G+   A++++ +M                                N  I   C+PN V 
Sbjct: 362 DGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVV 421

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ ++D LC+    D+A  L   M  +   P V+T+N+ I GLC A     A  +  +M 
Sbjct: 422 YTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQME 481

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
                P++ T+N ++D L +     EA  L+  + +R V  +  TYNT+M GF   G   
Sbjct: 482 KYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQ 541

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEV-------------------------- 363
           +  +L G M   G K D ++ N  +N YCK  +V                          
Sbjct: 542 QVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTII 601

Query: 364 ----------EEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
                     EEA+    EM+ +GI P + T+N L  G F
Sbjct: 602 LWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFF 641


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 259/540 (47%), Gaps = 51/540 (9%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           F++L+   A N   +       R    G+  N+ + N L+ C  +  RV    + F  ++
Sbjct: 139 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI 198

Query: 124 RSCFTPNAATF----NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           +    PN  T+    N   +G+     I  A+ +  K+   G  PNV+TY T I GLC+ 
Sbjct: 199 KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKV 258

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G   +A  L + +   N  +   C      ++ +I GLC+ G +D+A  +F +MK+  I 
Sbjct: 259 GLFGVAWRLIQNLCRKNQPLNNHC------FNAVIYGLCQGGILDEASEVFKEMKNSGIL 312

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           PDV +Y+ LI G C     ++A  +F EM + G+ P++ ++++++D  CK  ++D+A  +
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            + M   G+ P+  +Y+ L+DGFC  G ++ A + +  M S        +Y  LI GY K
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLF------------LGLFE------------- 394
           +K+   AL  +R M   G+ P  +  N +             L L E             
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492

Query: 395 ----IHQV------EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
               IH++      E AL+L   M +  V  D   Y+T I    K     +AV LF  + 
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            +    +++ Y  LI+      ++  A+ LF  +    + P+ + Y  ++ G CN G+M 
Sbjct: 553 KVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMT 612

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +AR LF +M     +P+V+T+   I+ ++++N+ ++ ++L  KMKE+ V PD  + ++++
Sbjct: 613 RARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 252/528 (47%), Gaps = 18/528 (3%)

Query: 53  IFDYMLRMHPSPPPVSSFNILL----------ASLAKNKHYDTRLNATGLFPNLYTYNIL 102
           +F+ +++  P P  + ++ I++            + +      ++  +G  PN+ TY   
Sbjct: 193 LFEVLIKFGPRPN-IHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTY 251

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   CK+G   + +     + R     N   FN++I GL     + EA+ +F ++K  G 
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P+V +Y+ LI+G CR G    A  +F+EM N     G++  PN  +YS +IDG CKEG 
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS----GIL--PNIYSYSILIDGFCKEGR 365

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VDKA  +F +MK+  I PDV +Y+ LI G C   D + A + + EM      PS   +  
Sbjct: 366 VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCS 425

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++    K+++   A +   +M + G+ P+    N ++  +C     N+A  L    +  G
Sbjct: 426 LIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENG 485

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              +  SYN  I+  C+    E+AL L   M+ + + P VV Y+TL     +    E A+
Sbjct: 486 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAV 545

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            LF +M + G+  + +TYT  I+    +  +  A  LF+ ++  +   D  AY  L+ G 
Sbjct: 546 MLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGF 605

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C +G +  A  LF  +      PNVVTY   I       + ++A  L+  M+E    PD 
Sbjct: 606 CNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQ 665

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMK-EKKVMPDASIVSIVVDLLVK 569
           I + MLI  F    E ++   L  +MK E +  P+  + + +++  +K
Sbjct: 666 ILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIK 713



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 208/429 (48%), Gaps = 7/429 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +  +G+ P++Y+Y+ILI+ FC+ GRV      F  +  S   PN  +++ LI G   E R
Sbjct: 306 MKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGR 365

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A  +F ++K  G  P+V +Y+ LI+G CR G    A+  +EEM + N        P+
Sbjct: 366 VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFS------PS 419

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
              Y ++I G  K      A   F  M+   + PD +  N ++   C   D+N+A  L  
Sbjct: 420 AFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSE 479

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +  + GV  +  ++N  +  +C+    ++A +LL +M++R V P+   Y+TL+  F    
Sbjct: 480 KFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRL 539

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              +A  LF  M  +G   +  +Y ILIN +  + +++ A  L++ M    + P  + Y 
Sbjct: 540 NSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYT 599

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L  G     ++  A  LFDEM R+G + +  TYT FI+   K     +A +L+  ++  
Sbjct: 600 SLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKER 659

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH-GVLVPNVVTYNIMIQGLCNDGQMDK 505
               D   Y  LI   C +G +  A  LF  +   G   PNVV Y  +I       + D+
Sbjct: 660 GVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQ 719

Query: 506 ARDLFLDME 514
           A  L+ +M 
Sbjct: 720 AEKLYEEMR 728



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 205/441 (46%), Gaps = 10/441 (2%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F+ LIK   + S +  A  +F + K  G E N+++ N L+  L           LFE + 
Sbjct: 139 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVL- 197

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCK----EGFVDKAKALFLQMKDENINPDVVTYNSLI 249
                I    +PN  TY+ +++  C+       + +A  +  ++      P+VVTY + I
Sbjct: 198 -----IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYI 252

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            GLC    +  A RL   +  +    +   FN ++  LC+   +DEAS +   M   G+ 
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL 312

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P+  +Y+ L+DGFC  G++++A E+F  M + G   +  SY+ILI+G+CK   V++AL +
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           + EM + GI P V +Y+ L  G      ++ A+K ++EM  +  +     Y + I G  K
Sbjct: 373 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 432

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +     A++ FR ++ L    D  A N ++   C+      A  L        +  N  +
Sbjct: 433 SKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYS 492

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YN  I  +C     +KA  L   M +    PDV+ +  LI  F +     K   L  KM 
Sbjct: 493 YNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT 552

Query: 550 EKKVMPDASIVSIVVDLLVKN 570
           +  +  +    +I+++L + +
Sbjct: 553 KVGITFNVKTYTILINLFISD 573



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 173/385 (44%), Gaps = 71/385 (18%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + S++IL+    K    D  L        +G+ P++Y+Y+ILI+ FC+ G +      
Sbjct: 348 PNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 407

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +  + F+P+A  + SLIKG +   +   A   F  ++  G  P+ I  N +++  CR
Sbjct: 408 WEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCR 467

Query: 179 TGHTMIALNLFEEMA-NG--------NGEIGVVCK--------------------PNTVT 209
                 AL L E+   NG        N  I  +C+                    P+ V 
Sbjct: 468 KPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVN 527

Query: 210 YSTIIDGLCKEGFVDKAKALFLQM-----------------------------------K 234
           YST+I    K    +KA  LF++M                                   K
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           +  + PD + Y SL+ G C+  +   A+ LF EM  +G  P+VVT+   ++E  K  K +
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNN 647

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNIL 353
           +A +L + M +RGV P+   Y  L+  FC  G++NRAE LF  M+  G C  + V Y  L
Sbjct: 648 QAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCL 707

Query: 354 INGYCKNKEVEEALSLYREMVSKGI 378
           IN Y K  + ++A  LY EM +KG+
Sbjct: 708 INSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 161/319 (50%), Gaps = 4/319 (1%)

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V ++ LI      +    A  +F+   D G++ ++++ N ++  L ++ ++D    L ++
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 303 MVQRGVRPNACTYNTLMDGFCL-MG---KINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +++ G RPN  TY  +M+ FC  +G    I RA E+ G +   G   + V+Y   I G C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K      A  L + +  K        +N +  GL +   ++ A ++F EM+  G+  D  
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y+  IDG C+ G + +A E+F+ +R      +I +Y+ LIDG CK GR+  A E+F  +
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            +  ++P+V +Y+I+I G C  G MD A   + +M  N  +P    +  LI G+ +  + 
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQF 436

Query: 539 SKVNELLHKMKEKKVMPDA 557
           +   +    M++  + PD 
Sbjct: 437 ANALKEFRIMQKLGMWPDT 455



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P++  Y+ LI+CF K        + F ++ +   T N  T+  LI    ++ ++  A 
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            LF  +K     P+ I Y +L+ G C TG    A  LF+EM+         C PN VTY+
Sbjct: 581 RLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG------CSPNVVTYT 634

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
             I+   K    ++A  L+ +MK+  + PD + Y  LI   C+  + N A+ LF EM  +
Sbjct: 635 CFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQE 694

Query: 272 G-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           G   P+VV +  +++   K  K D+A +L + M  +G+     +  ++ + +C   ++ +
Sbjct: 695 GRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLK 754

Query: 331 AEELFGSMESMGCKHDDVSYNIL 353
             +L G  +        V Y +L
Sbjct: 755 TGKLGGRAKQGLDWRFQVKYTLL 777


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 243/500 (48%), Gaps = 35/500 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNIL 102
           EA  +   M R    PP   S+N+++A + +  +  D       +    + PN  TYN +
Sbjct: 182 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 241

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+   K G +  GF    +++     PNA T+N L+ GL    R+ E +AL  ++ +   
Sbjct: 242 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 301

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG---------VVCK--------- 204
            P+  TY+ L +GL R G +   L+LF +       IG          +CK         
Sbjct: 302 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 361

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      P  V Y+T+I+G C+ G ++ A + F QMK  +I PD +TYN+LI+GLC
Sbjct: 362 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 421

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A     A+ L +EM D GV P+V TFN ++D   +  ++++   +L  M + G++PN  
Sbjct: 422 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y ++++ FC  GKI  A  +   M       +   YN +I+ Y ++   ++A  L  +M
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S GI P++VTYN L  GL    Q+  A ++ + +    +  D  +Y T I   C  G I
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A++L + +     +  ++ Y+ LI GL  +GRL     L+  +    +VP+   +NIM
Sbjct: 602 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 661

Query: 494 IQGLCNDGQMDKARDLFLDM 513
           ++     G   KA DL  +M
Sbjct: 662 VEAYSKYGNEIKAEDLRKEM 681



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 10/495 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-A 152
           PN ++YN++I    + GR       F  +      PN  T+N++I G H +   +EA   
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG-HIKGGDLEAGFR 256

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G +PN ITYN L++GLCR G       L +EMA+          P+  TYS 
Sbjct: 257 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK------MVPDGFTYSI 310

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           + DGL + G      +LF +     +     T + L++GLC     + A+ +   +++ G
Sbjct: 311 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 370

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+ V +N +++  C+  +++ A      M  R ++P+  TYN L++G C   +I  A+
Sbjct: 371 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 430

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M+  G      ++N LI+ Y +  ++E+   +  EM   G+KP VV+Y ++    
Sbjct: 431 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 490

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  ++  A+ + D+M    V  + + Y   ID   ++G   +A  L   ++       I
Sbjct: 491 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 550

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI GLC   ++  A E+  SL +  L+P+ V+YN +I   C  G +DKA DL   
Sbjct: 551 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 610

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK--N 570
           M +      V T+  LI G       +++  L  KM +  V+P  +I +I+V+   K  N
Sbjct: 611 MHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 670

Query: 571 EISLKSLPSFLVQER 585
           EI  + L   ++Q+R
Sbjct: 671 EIKAEDLRKEMLQKR 685



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 209/453 (46%), Gaps = 45/453 (9%)

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           G HA+ R       F  L + G  P+   +N  +      G    A+ +   M       
Sbjct: 143 GRHADVR-----RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAP- 196

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                PN  +Y+ +I G+ + G    A  +F +M +  + P+ +TYN++I G     D  
Sbjct: 197 ----PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 252

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
              RL  +M+  G++P+ +T+NV++  LC+  +M E S LLD M  + + P+  TY+ L 
Sbjct: 253 AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 312

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG    G       LFG     G    D + +IL+NG CK+ +V  A  + + +V+ G+ 
Sbjct: 313 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 372

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           PT V YNTL  G  +  ++E A   F +M+   +  D  TY   I+GLCK   I  A +L
Sbjct: 373 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 432

Query: 440 F-----------------------RTLRILKC------------ELDIQAYNCLIDGLCK 464
                                   RT ++ KC            + ++ +Y  +++  CK
Sbjct: 433 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 492

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +G++  A  +   + H  ++PN   YN +I      G  D+A  L   M+ N  +P ++T
Sbjct: 493 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 552

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           +++LI G    ++ S+  E+++ +   +++PDA
Sbjct: 553 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 585



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 185/369 (50%), Gaps = 1/369 (0%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEA 261
            +P+T  ++  +      G + +A  +  +M +D    P+  +YN +I G+  A    +A
Sbjct: 160 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 219

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             +F EM ++ V P+ +T+N ++D   K   ++   RL D MV  G++PNA TYN L+ G
Sbjct: 220 VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSG 279

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  G++     L   M S     D  +Y+IL +G  +N + +  LSL+ + +  G+   
Sbjct: 280 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             T + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +  A   F 
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 399

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            ++    + D   YN LI+GLCK+ R+  A +L   +    + P V T+N +I      G
Sbjct: 400 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           Q++K   +  +M+EN   P+V+++  +++ F +  +  +   +L  M  K V+P+A + +
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 519

Query: 562 IVVDLLVKN 570
            ++D  V++
Sbjct: 520 AIIDAYVEH 528



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 13/305 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           AF  F  M   H  P  ++ +N L+  L K +           +   G+ P + T+N LI
Sbjct: 394 AFSTFGQMKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 452

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + + + G++   FI    +  +   PN  ++ S++       +I EA A+   +      
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 512

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN   YN +I+     G    A  L E+M + NG       P+ VTY+ +I GLC +  +
Sbjct: 513 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQI 566

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+ +   + +  + PD V+YN+LI   C+  + ++A  L   M   G++ +V T++ +
Sbjct: 567 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 626

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L    +++E   L   M+Q  V P+   +N +++ +   G   +AE+L   M     
Sbjct: 627 ISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 686

Query: 344 KHDDV 348
            HDD 
Sbjct: 687 NHDDT 691


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 247/500 (49%), Gaps = 35/500 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNIL 102
           EA  +   M R    PP   S+N+++A + +  +  D       +    + PN  TYN +
Sbjct: 178 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 237

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+   K G +  GF    +++     PNA T+N L+ GL    R+ E +AL  ++ +   
Sbjct: 238 IDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 297

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLF-EEMANG-----------------NGEIGVVCK 204
            P+  TY+ L +GL R G +   L+LF + + NG                 +G++ +  +
Sbjct: 298 VPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 357

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      P  V Y+T+I+G C+ G ++ A + F QMK  +I PD +TYN+LI+GLC
Sbjct: 358 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 417

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A     A+ L +EM D GV P+V TFN ++D   +  ++++   +L  M + G++PN  
Sbjct: 418 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y ++++ FC  GKI  A  +   M       +   YN +I+ Y ++   ++A  L  +M
Sbjct: 478 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S GI P++VTYN L  GL    Q+  A ++ + +    +  D  +Y T I   C  G I
Sbjct: 538 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A++L + +     +  ++ Y+ LI GL  +GRL     L+  +    +VP+   +NIM
Sbjct: 598 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIM 657

Query: 494 IQGLCNDGQMDKARDLFLDM 513
           ++     G   KA DL  +M
Sbjct: 658 VEAYSKYGNEIKAEDLRKEM 677



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 10/495 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-A 152
           PN ++YN++I    + GR       F  +      PN  T+N++I G H +   +EA  +
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG-HIKGGDLEAGFS 252

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G +PN ITYN L++GLCR G       L +EMA+          P+  TYS 
Sbjct: 253 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK------MVPDGFTYSI 306

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           + DGL + G      +LF +     +     T + L++GLC     + A+ +   +++ G
Sbjct: 307 LFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 366

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+ V +N +++  C+  +++ A      M  R ++P+  TYN L++G C   +I  A+
Sbjct: 367 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 426

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M+  G      ++N LI+ Y +  ++E+   +  EM   G+KP VV+Y ++    
Sbjct: 427 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 486

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  ++  A+ + D+M    V  + + Y   ID   ++G   +A  L   ++       I
Sbjct: 487 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 546

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI GLC   ++  A E+  SL +  L+P+ V+YN +I   C  G +DKA DL   
Sbjct: 547 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 606

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK--N 570
           M +      V T+  LI G        ++  L  KM +  V+P  +I +I+V+   K  N
Sbjct: 607 MHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 666

Query: 571 EISLKSLPSFLVQER 585
           EI  + L   ++Q+R
Sbjct: 667 EIKAEDLRKEMLQKR 681



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 208/453 (45%), Gaps = 45/453 (9%)

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           G HA+ R       F  L + G  P+   +N  +      G    A+ +   M       
Sbjct: 139 GRHADVR-----RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAP- 192

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                PN  +Y+ +I G+ + G    A  +F +M +  + P+ +TYN++I G     D  
Sbjct: 193 ----PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 248

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
               L  +M+  G++P+ +T+NV++  LC+  +M E S LLD M  + + P+  TY+ L 
Sbjct: 249 AGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 308

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG    G       LFG     G    D + +IL+NG CK+ +V  A  + + +V+ G+ 
Sbjct: 309 DGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 368

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           PT V YNTL  G  +  ++E A   F +M+   +  D  TY   I+GLCK   I  A +L
Sbjct: 369 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 428

Query: 440 F-----------------------RTLRILKC------------ELDIQAYNCLIDGLCK 464
                                   RT ++ KC            + ++ +Y  +++  CK
Sbjct: 429 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 488

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +G++  A  +   + H  ++PN   YN +I      G  D+A  L   M+ N  +P ++T
Sbjct: 489 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 548

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           +++LI G    ++ S+  E+++ +   +++PDA
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 581



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 184/369 (49%), Gaps = 1/369 (0%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEA 261
            +P+T  ++  +      G + +A  +  +M +D    P+  +YN +I G+  A    +A
Sbjct: 156 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 215

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             +F EM ++ V P+ +T+N ++D   K   ++    L D MV  G++PNA TYN L+ G
Sbjct: 216 VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSG 275

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  G++     L   M S     D  +Y+IL +G  +N + +  LSL+ + +  G+   
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             T + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +  A   F 
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 395

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            ++    + D   YN LI+GLCK+ R+  A +L   +    + P V T+N +I      G
Sbjct: 396 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           Q++K   +  +M+EN   P+V+++  +++ F +  +  +   +L  M  K V+P+A + +
Sbjct: 456 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 515

Query: 562 IVVDLLVKN 570
            ++D  V++
Sbjct: 516 AIIDAYVEH 524



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 13/305 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           AF  F  M   H  P  ++ +N L+  L K +           +   G+ P + T+N LI
Sbjct: 390 AFSTFGQMKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 448

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + + + G++   FI    +  +   PN  ++ S++       +I EA A+   +      
Sbjct: 449 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 508

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN   YN +I+     G    A  L E+M + NG       P+ VTY+ +I GLC +  +
Sbjct: 509 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQI 562

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+ +   + +  + PD V+YN+LI   C+  + ++A  L   M   G++ +V T++ +
Sbjct: 563 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 622

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L    ++ E   L   M+Q  V P+   +N +++ +   G   +AE+L   M     
Sbjct: 623 ISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 682

Query: 344 KHDDV 348
            HDD 
Sbjct: 683 NHDDT 687


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 236/452 (52%), Gaps = 18/452 (3%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            +PN  TFN +IK +     + +A  +F  +    C+P+V TY TL++GLC+      A+
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L +EM          C P+ VT++ +I+GLCK+G + +   L   M  +   P+ VTYN
Sbjct: 225 SLLDEMQIDG------CFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYN 278

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LIHGLC      +A  L   M+     P+VVT+  I++ L K  +  + +R+L LM +R
Sbjct: 279 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEER 338

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G   N   Y+ L+ G    GK   A +LF  M    C+ + + Y+ +I+G C++ + +EA
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           L +  EM +   KP   TY++L  G FE      A++++ +M +     +   Y+  I G
Sbjct: 399 LEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHG 458

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF----CSLPHGV 482
           LCK+G + EA+ ++  +    C+ D+ AY  +I+GL  +G ++ A +L+    C  P   
Sbjct: 459 LCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ 518

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI-RINEPSKV 541
             P+VVTYNI++  LC    + +A DL   M +    PD++T  + +     +++ P   
Sbjct: 519 --PDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDG 576

Query: 542 NELLHK-----MKEKKVMPDASIVSIVVDLLV 568
            E L       +K ++V+  + IV +++  L+
Sbjct: 577 REFLDGLVVRLLKRQRVLGASKIVEVMLQKLL 608



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 255/527 (48%), Gaps = 73/527 (13%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-------KHYDTRLNATG--LFPNLY 97
           P +A  +FD M         V SFN +L  + +        + Y+  + A G  + PN+ 
Sbjct: 111 PEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVL 170

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T+N++I   CK+G V      F  +  S   P+  T+ +L+ GL    RI EA +L  ++
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           +  GC P+ +T+N LINGLC+ G       L + M          C PN VTY+T+I GL
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKG------CAPNEVTYNTLIHGL 284

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC--------------------HAND 257
           C +G ++KA +L  +M      P+VVTY ++I+GL                     H N+
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNE 344

Query: 258 W---------------NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           +                EA +LF EM  +  + + + ++ ++D LC++ K DEA  +L  
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSE 404

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M     +PNA TY++LM GF   G  ++A E++  M       ++V Y++LI+G CK+ +
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGK 464

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRTY 420
           V+EA+ ++ +M+ KG KP VV Y ++  GL     VE AL+L++EM  Q      D  TY
Sbjct: 465 VKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTY 524

Query: 421 TTFIDGLCKNGYIIEAVELFRT----------------LRILKCELD-IQAYNCLIDGLC 463
              ++ LCK   I  A++L  +                LR L+ +LD  Q     +DGL 
Sbjct: 525 NILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLV 584

Query: 464 ----KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               K  R+  A ++   +   +L P   T+  +++ LCN  ++  A
Sbjct: 585 VRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 216/425 (50%), Gaps = 6/425 (1%)

Query: 149 EAAALFTKLK-AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +A  LF ++   F C+  V ++N+++N + + G    AL  +  +    G  GV   PN 
Sbjct: 113 KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVI---GAKGVNISPNV 169

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           +T++ +I  +CK G VD A  +F  M      PDV TY +L+ GLC A+  +EA  L  E
Sbjct: 170 LTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE 229

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G  PS VTFNV+++ LCK   +   ++L+D M  +G  PN  TYNTL+ G CL GK
Sbjct: 230 MQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGK 289

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + +A  L   M S  C  + V+Y  +ING  K     +   +   M  +G       Y+ 
Sbjct: 290 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSA 349

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GLF+  + + A++LF EM       +T  Y+  IDGLC++G   EA+E+   +   +
Sbjct: 350 LISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNR 409

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ +   Y+ L+ G  ++G    A E++  +       N V Y+++I GLC DG++ +A 
Sbjct: 410 CKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAM 469

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM--KEKKVMPDASIVSIVVD 565
            ++  M      PDV+ +  +I+G           +L ++M  +E    PD    +I+++
Sbjct: 470 MVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLN 529

Query: 566 LLVKN 570
            L K 
Sbjct: 530 ALCKQ 534



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 4/365 (1%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDE-NINPDVVTYNSLIHGLCHANDWNEAKRLF--- 265
           +  I     K    +KA  LF +M  E      V ++NS+++ +     +  A   +   
Sbjct: 98  FVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHV 157

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           I      + P+V+TFN+++  +CK   +D+A ++   M     +P+  TY TLMDG C  
Sbjct: 158 IGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKA 217

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +I+ A  L   M+  GC    V++N+LING CK  ++     L   M  KG  P  VTY
Sbjct: 218 DRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTY 277

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           NTL  GL    ++E A+ L D M       +  TY T I+GL K G  ++   +   +  
Sbjct: 278 NTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEE 337

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
               ++   Y+ LI GL K G+ + A +LF  +       N + Y+ +I GLC DG+ D+
Sbjct: 338 RGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDE 397

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A ++  +M  N   P+  T+  L+ GF       K  E+   M +     +    S+++ 
Sbjct: 398 ALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIH 457

Query: 566 LLVKN 570
            L K+
Sbjct: 458 GLCKD 462



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 18/338 (5%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T+ SLI    +  D+   +++   M  +        F VI     K    ++A  L D M
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121

Query: 304 V-----QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS-----YNIL 353
                 +R V+    ++N++++     G   RA E +  +  +G K  ++S     +N++
Sbjct: 122 AYEFECKRTVK----SFNSVLNVIIQEGLFYRALEFYNHV--IGAKGVNISPNVLTFNLV 175

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I   CK   V++A+ ++R+M     +P V TY TL  GL +  +++ A+ L DEMQ DG 
Sbjct: 176 IKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGC 235

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
                T+   I+GLCK G +    +L   + +  C  +   YN LI GLC  G+L+ A  
Sbjct: 236 FPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAIS 295

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQ-MDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           L   +     VPNVVTY  +I GL   G+ +D AR L L MEE     +   +  LI G 
Sbjct: 296 LLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLAL-MEERGYHVNEYVYSALISGL 354

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +  +  +  +L  +M  K+   +  + S V+D L ++
Sbjct: 355 FKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRD 392



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 7/266 (2%)

Query: 322 FCLMGKINRAEELFGSMESMG----CKHDDVSYNILINGYCKNKEVEEALSLYREMV-SK 376
           F   GK +  E+  G  + M     CK    S+N ++N   +      AL  Y  ++ +K
Sbjct: 102 FKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAK 161

Query: 377 G--IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           G  I P V+T+N +   + ++  V+ A+++F +M       D  TY T +DGLCK   I 
Sbjct: 162 GVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRID 221

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EAV L   ++I  C      +N LI+GLCK G L    +L  ++      PN VTYN +I
Sbjct: 222 EAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLI 281

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLC  G+++KA  L   M  +   P+V+T+  +I+G ++         +L  M+E+   
Sbjct: 282 HGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYH 341

Query: 555 PDASIVSIVVDLLVKNEISLKSLPSF 580
            +  + S ++  L K   S +++  F
Sbjct: 342 VNEYVYSALISGLFKEGKSQEAMQLF 367



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 134/278 (48%), Gaps = 4/278 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T+ +L+D +  +G     E++   M        +  + ++   Y K    E+A+ L+  M
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121

Query: 374 VSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM---QRDGVAADTRTYTTFIDGLCK 429
             +   K TV ++N++   + +      AL+ ++ +   +   ++ +  T+   I  +CK
Sbjct: 122 AYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCK 181

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G + +AV++FR + + KC+ D+  Y  L+DGLCK+ R+  A  L   +      P+ VT
Sbjct: 182 VGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 241

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           +N++I GLC  G + +   L  +M     AP+ +T++ LIHG     +  K   LL +M 
Sbjct: 242 FNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             K +P+      +++ LVK   +L       + E +G
Sbjct: 302 SSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERG 339


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 219/461 (47%), Gaps = 7/461 (1%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           +TY  +++   K GR+         +  +    +     +L++G      +  A  LF +
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
               G  P  + Y  LI G  + G T  A  L  +M  G G +     P+T   S ++ G
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM-TGQGLL-----PSTFELSLVLKG 376

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           L  +     A  LF +M D  + PDV TYN+LIH  C A+   EA  LF  M   GV+PS
Sbjct: 377 LLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           + T+N ++   CK   MDEA +L   M   G +PN  TY TLM G+      + A  L  
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M+  G   +D +YN+LING C    V E   + +  +S+G  PT++TYN++  G  +  
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +  A  ++ +M+  G+  +  TYT+FIDG C+ G    A+++   +R    + DI AYN
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI+G C+ G +  A +L   L    L PN V YN +I G  N   M +    +  M + 
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
               D  T+  LI GF +    +   EL  +M  K  +PDA
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 233/474 (49%), Gaps = 7/474 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P    Y +LI    ++G     +    ++      P+    + ++KGL  + R  +A
Sbjct: 327 GIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDA 386

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF ++   G  P+V TYN LI+  C+      ALNLF+ M           KP+  TY
Sbjct: 387 VCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG------VKPSINTY 439

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           ++++ G CK+G +D+A  L+ +M  E   P+VVTY +L+ G     D++ A  L  EM  
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV  +  T+NV+++ +C   ++ E   +L   +  G  P   TYN++++GF   G +  
Sbjct: 500 NGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGS 559

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  ++  M   G   + ++Y   I+GYC+    + AL +  ++  +G++P +V YN L  
Sbjct: 560 AFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALIN 619

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G  +   + HAL+L   + +DG+A +T  Y + I G      + E  + + ++       
Sbjct: 620 GFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVA 679

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D   Y  LIDG  K G + FA EL+  +     +P+  T+  +  GLC  G +D A+ L 
Sbjct: 680 DTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLL 739

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            +M      P+V  ++MLI+G++R  +  +   L  +M    + PD +   I+V
Sbjct: 740 EEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 224/444 (50%), Gaps = 7/444 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   GL P+ +  ++++       R       F  +  S   P+  T+N+LI       
Sbjct: 357 QMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAH 415

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           ++ EA  LF ++K  G +P++ TYN+L+ G C+ G    A+ L+ EM           KP
Sbjct: 416 KLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG------FKP 469

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N VTY T++ G   +   D A AL  +MK   ++ +  TYN LI+G+C  +   E   + 
Sbjct: 470 NVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGML 529

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
              M +G  P+++T+N I++   K   M  A  +   M ++G+ PN  TY + +DG+C  
Sbjct: 530 KSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRT 589

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  + A ++   +   G + D V+YN LING+C+   +  AL L   ++  G+ P  V Y
Sbjct: 590 GCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVY 649

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N+L  G   ++ ++   K ++ M + G+ ADT TYTT IDG  K+G +  A+EL+  +  
Sbjct: 650 NSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMA 709

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D   +  L  GLC+SG +  A +L   +    + PNV  YN++I G   D ++ +
Sbjct: 710 KGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQE 769

Query: 506 ARDLFLDMEENAAAPDVITFDMLI 529
           A  L  +M      PD  T+D+L+
Sbjct: 770 AFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 191/420 (45%), Gaps = 7/420 (1%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A   +  + A G  P++ +   L+    R      AL LF EM  G G      + +   
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEM-RGRGY-----RVDAWM 194

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +  ++    KEG  + A  LF +M    I+PD   Y   I  LC   D   A R+  EM 
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           + G      T+  ++D L K  +M+EA R+ D M   G + +     TLM G+CL  ++ 
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVG 314

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF      G     V Y +LI G  +    ++A  L R+M  +G+ P+    + + 
Sbjct: 315 NALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL 374

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    + + A+ LF+EM   G+  D  TY   I   C+   + EA+ LF  ++    +
Sbjct: 375 KGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             I  YN L+ G CK G +  A +L+  +P     PNVVTY  +++G       D A  L
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYAL 493

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +M++N  + +  T+++LI+G   ++   +V+ +L     +  +P     + +++  VK
Sbjct: 494 LDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVK 553



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 36/343 (10%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           +EA  ++  M  M    P V ++  L+      K +D        +   G+  N YTYN+
Sbjct: 453 DEAVKLYSEM-PMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNV 511

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN  C + RV          +   F P   T+NS+I G      +  A  ++ +++  G
Sbjct: 512 LINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG 571

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANG---------NGEIGVVCK-------- 204
             PN+ITY + I+G CRTG + +AL +  ++            N  I   C+        
Sbjct: 572 LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHAL 631

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PNTV Y+++I G      + +    +  M    I  D  TY +LI G 
Sbjct: 632 QLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGF 691

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
               +   A  L+ EMM +G  P   TF  +   LC++  +D A +LL+ M +  VRPN 
Sbjct: 692 SKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNV 751

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
             YN L++G+    K+  A  L   M +MG + DD +Y+IL++
Sbjct: 752 FIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 13/245 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNI 101
             AF ++  M R    PP + ++   +    +    D  L         GL P++  YN 
Sbjct: 558 GSAFTVYQQM-REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN FC+ G +S        +L+    PN   +NSLI G    + + E +  +  +   G
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              +  TY TLI+G  + G+   AL L+ EM    G I     P+  T++ +  GLC+ G
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMM-AKGYI-----PDAFTFTALTHGLCRSG 730

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D AK L  +M+  ++ P+V  YN LI+G        EA RL  EM++ G+QP   T++
Sbjct: 731 DIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYD 790

Query: 282 VIMDE 286
           +++ +
Sbjct: 791 ILVSK 795



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 110/241 (45%)

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A + +  M + G   D  S   L+    +    ++AL+L+ EM  +G +     ++ L  
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
              +    E A++LFDEM    +  D R Y   I  LCK G    A+ + R ++ +  + 
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               Y  ++D L K+GR++ A  +   +       +V+    +++G C   ++  A +LF
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +  ++   P  + + +LI G  ++    K  EL  +M  + ++P    +S+V+  L+ +
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 571 E 571
            
Sbjct: 381 R 381


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 243/500 (48%), Gaps = 35/500 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNIL 102
           EA  +   M R    PP   S+N+++A + +  +  D       +    + PN  TYN +
Sbjct: 45  EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 104

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+   K G +  GF    +++     PNA T+N L+ GL    R+ E +AL  ++ +   
Sbjct: 105 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 164

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG---------VVCK--------- 204
            P+  TY+ L +GL R G +   L+LF +       IG          +CK         
Sbjct: 165 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 224

Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                      P  V Y+T+I+G C+ G ++ A + F QMK  +I PD +TYN+LI+GLC
Sbjct: 225 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 284

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A     A+ L +EM D GV P+V TFN ++D   +  ++++   +L  M + G++PN  
Sbjct: 285 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 344

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y ++++ FC  GKI  A  +   M       +   YN +I+ Y ++   ++A  L  +M
Sbjct: 345 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 404

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S GI P++VTYN L  GL    Q+  A ++ + +    +  D  +Y T I   C  G I
Sbjct: 405 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 464

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A++L + +     +  ++ Y+ LI GL  +GRL     L+  +    +VP+   +NIM
Sbjct: 465 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 524

Query: 494 IQGLCNDGQMDKARDLFLDM 513
           ++     G   KA DL  +M
Sbjct: 525 VEAYSKYGNEIKAEDLRKEM 544



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 10/495 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-A 152
           PN ++YN++I    + GR       F  +      PN  T+N++I G H +   +EA   
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG-HIKGGDLEAGFR 119

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G +PN ITYN L++GLCR G       L +EMA+          P+  TYS 
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK------MVPDGFTYSI 173

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           + DGL + G      +LF +     +     T + L++GLC     + A+ +   +++ G
Sbjct: 174 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 233

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+ V +N +++  C+  +++ A      M  R ++P+  TYN L++G C   +I  A+
Sbjct: 234 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 293

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M+  G      ++N LI+ Y +  ++E+   +  EM   G+KP VV+Y ++    
Sbjct: 294 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 353

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  ++  A+ + D+M    V  + + Y   ID   ++G   +A  L   ++       I
Sbjct: 354 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 413

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI GLC   ++  A E+  SL +  L+P+ V+YN +I   C  G +DKA DL   
Sbjct: 414 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 473

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK--N 570
           M +      V T+  LI G       +++  L  KM +  V+P  +I +I+V+   K  N
Sbjct: 474 MHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 533

Query: 571 EISLKSLPSFLVQER 585
           EI  + L   ++Q+R
Sbjct: 534 EIKAEDLRKEMLQKR 548



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 209/453 (46%), Gaps = 45/453 (9%)

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           G HA+ R       F  L + G  P+   +N  +      G    A+ +   M       
Sbjct: 6   GRHADVR-----RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAP- 59

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
                PN  +Y+ +I G+ + G    A  +F +M +  + P+ +TYN++I G     D  
Sbjct: 60  ----PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 115

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
              RL  +M+  G++P+ +T+NV++  LC+  +M E S LLD M  + + P+  TY+ L 
Sbjct: 116 AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 175

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           DG    G       LFG     G    D + +IL+NG CK+ +V  A  + + +V+ G+ 
Sbjct: 176 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 235

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           PT V YNTL  G  +  ++E A   F +M+   +  D  TY   I+GLCK   I  A +L
Sbjct: 236 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 295

Query: 440 F-----------------------RTLRILKC------------ELDIQAYNCLIDGLCK 464
                                   RT ++ KC            + ++ +Y  +++  CK
Sbjct: 296 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 355

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +G++  A  +   + H  ++PN   YN +I      G  D+A  L   M+ N  +P ++T
Sbjct: 356 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 415

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           +++LI G    ++ S+  E+++ +   +++PDA
Sbjct: 416 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 185/369 (50%), Gaps = 1/369 (0%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEA 261
            +P+T  ++  +      G + +A  +  +M +D    P+  +YN +I G+  A    +A
Sbjct: 23  ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 82

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             +F EM ++ V P+ +T+N ++D   K   ++   RL D MV  G++PNA TYN L+ G
Sbjct: 83  VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSG 142

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  G++     L   M S     D  +Y+IL +G  +N + +  LSL+ + +  G+   
Sbjct: 143 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 202

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             T + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +  A   F 
Sbjct: 203 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 262

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            ++    + D   YN LI+GLCK+ R+  A +L   +    + P V T+N +I      G
Sbjct: 263 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 322

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           Q++K   +  +M+EN   P+V+++  +++ F +  +  +   +L  M  K V+P+A + +
Sbjct: 323 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 382

Query: 562 IVVDLLVKN 570
            ++D  V++
Sbjct: 383 AIIDAYVEH 391



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 13/305 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           AF  F  M   H  P  ++ +N L+  L K +           +   G+ P + T+N LI
Sbjct: 257 AFSTFGQMKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 315

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + + + G++   FI    +  +   PN  ++ S++       +I EA A+   +      
Sbjct: 316 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 375

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN   YN +I+     G    A  L E+M + NG       P+ VTY+ +I GLC +  +
Sbjct: 376 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQI 429

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+ +   + +  + PD V+YN+LI   C+  + ++A  L   M   G++ +V T++ +
Sbjct: 430 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 489

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L    +++E   L   M+Q  V P+   +N +++ +   G   +AE+L   M     
Sbjct: 490 ISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 549

Query: 344 KHDDV 348
            HDD 
Sbjct: 550 NHDDT 554


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 259/525 (49%), Gaps = 53/525 (10%)

Query: 79  KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
           K++  D+R+       N+     LI  +C  G V+     F  ++    TPN A F+ LI
Sbjct: 315 KDEMVDSRVPV-----NVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLI 369

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE---MANG 195
           +       + +A  L+T++K  G +P V   N L+ G  +        NL E    + +G
Sbjct: 370 EWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQ-------NLLENAYLLLDG 422

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
             E G+    + VTY+ ++  LC+ G V++A  L+ +M  + I P +V+YN +I G C  
Sbjct: 423 AVENGIA---SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKK 479

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
              ++A  +   +++ G++P+ +T+ ++M+   K    + A  + D MV  G+ P   T+
Sbjct: 480 GCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTF 539

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N++++G C +G+++ A +   +          ++YN +I+GY K   ++ A S+YREM  
Sbjct: 540 NSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCR 599

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
             I P V+TY +L  G  + ++++ ALK+ D+M+R G+  D   Y T I G CK   +  
Sbjct: 600 SEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMEN 659

Query: 436 AVELF----------------------RTLRILKCEL-------------DIQAYNCLID 460
           A + F                      R L  ++  L             D++ Y  LID
Sbjct: 660 ACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLID 719

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GL K G+L FA +L+  +    +VP++  YN++I GLCN GQ++ A  +  +M+ N   P
Sbjct: 720 GLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITP 779

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            V+ ++ LI G  +     +   L  +M +K ++PD +   I+V+
Sbjct: 780 TVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 251/490 (51%), Gaps = 14/490 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNI 101
           N A  +FD ++ +  +P  V+ F++L+       ++ K     TR+   GL P ++  N 
Sbjct: 344 NSALRLFDEVVEVGVTPN-VAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNF 402

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+  F K   +   ++     + +    +  T+N ++  L    ++ EA  L+ K+   G
Sbjct: 403 LLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKG 461

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P++++YN +I G C+ G     ++   E+ NG  E G+  KPN +TY+ +++G  K+G
Sbjct: 462 ITPSLVSYNHMILGHCKKG----CMDDAHEVMNGIIESGL--KPNAITYTILMEGSFKKG 515

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             + A  +F QM    I P   T+NS+I+GLC     +EA+      + Q   P+ +T+N
Sbjct: 516 DCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYN 575

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+D   K   +D A  +   M +  + PN  TY +L++GFC   K++ A ++   M+  
Sbjct: 576 CIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRK 635

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + D   Y  LI G+CK +++E A   + +++  G+ P  + YN +      ++ +E A
Sbjct: 636 GLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAA 695

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L L  EM  + +  D + YT+ IDGL K G +  A++L+  +       DI  YN LI+G
Sbjct: 696 LNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLING 755

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC  G+L+ A ++   +    + P V+ YN +I G   +G + +A  L  +M +    PD
Sbjct: 756 LCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPD 815

Query: 522 VITFDMLIHG 531
             T+D+L++G
Sbjct: 816 DTTYDILVNG 825



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 234/506 (46%), Gaps = 13/506 (2%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V   N+LL ++ +    +        +    ++ + YT  +L+    K G+       
Sbjct: 185 PWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERY 244

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG+        +AA+++ +I+ +   S +  A+ L    +  G  P+  TY  +I    R
Sbjct: 245 FGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVR 304

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   AL L +EM +    +      N    +++I G C  G V+ A  LF ++ +  +
Sbjct: 305 LGNFGEALRLKDEMVDSRVPV------NVAVATSLIKGYCVRGDVNSALRLFDEVVEVGV 358

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+V  ++ LI       +  +A  L+  M   G+QP+V   N ++    K   ++ A  
Sbjct: 359 TPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYL 418

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LLD  V+ G+  +  TYN ++   C +GK+N A  L+  M   G     VSYN +I G+C
Sbjct: 419 LLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHC 477

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   +++A  +   ++  G+KP  +TY  L  G F+    EHA  +FD+M   G+     
Sbjct: 478 KKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDY 537

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+ + I+GLCK G + EA +   T            YNC+IDG  K G +  A  ++  +
Sbjct: 538 TFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREM 597

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + PNV+TY  +I G C   +MD A  +  DM+      D+  +  LI GF ++ + 
Sbjct: 598 CRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDM 657

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVV 564
               +   K+ E  + P+  + +I++
Sbjct: 658 ENACKFFSKLLEVGLTPNTIVYNIMI 683



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 229/489 (46%), Gaps = 7/489 (1%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKG 140
           + Y  +    GL  +  +Y+I+I   C+   + L            + P+  T+ ++I  
Sbjct: 242 ERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGA 301

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
                   EA  L  ++       NV    +LI G C  G    AL LF+E+     E+G
Sbjct: 302 CVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVV----EVG 357

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           V   PN   +S +I+   K G V+KA  L+ +MK   + P V   N L+ G    N    
Sbjct: 358 VT--PNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLEN 415

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A  L    ++ G+  SVVT+N+++  LC+  K++EA  L D M+ +G+ P+  +YN ++ 
Sbjct: 416 AYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMIL 474

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G C  G ++ A E+   +   G K + ++Y IL+ G  K  + E A +++ +MV+ GI P
Sbjct: 475 GHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVP 534

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           T  T+N++  GL ++ +V  A    +   +      + TY   IDG  K G I  A  ++
Sbjct: 535 TDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVY 594

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
           R +   +   ++  Y  LI+G CKS ++  A ++   +    L  ++  Y  +I G C  
Sbjct: 595 REMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKM 654

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
             M+ A   F  + E    P+ I ++++I  +  +N       L  +M   K+  D  I 
Sbjct: 655 QDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIY 714

Query: 561 SIVVDLLVK 569
           + ++D L+K
Sbjct: 715 TSLIDGLLK 723



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 207/459 (45%), Gaps = 7/459 (1%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +N L+  + +  +++     F  +L     P     N L+  +   + + +A  LF ++
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
                  +  T   L+    + G  + A   F + A G G      K +  +YS +I  +
Sbjct: 214 AERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAA-GRG-----LKLDAASYSIVIQAV 267

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C+   +D A  L    ++    P   TY ++I       ++ EA RL  EM+D  V  +V
Sbjct: 268 CRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNV 327

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
                ++   C    ++ A RL D +V+ GV PN   ++ L++    +G + +A EL+  
Sbjct: 328 AVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTR 387

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+ MG +      N L+ G+ K   +E A  L    V  GI  +VVTYN + L L E+ +
Sbjct: 388 MKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGK 446

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V  A  L+D+M   G+     +Y   I G CK G + +A E+   +     + +   Y  
Sbjct: 447 VNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTI 506

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           L++G  K G  + A+ +F  +    +VP   T+N +I GLC  G++ +ARD      + +
Sbjct: 507 LMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQS 566

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             P  +T++ +I G+++         +  +M   ++ P+
Sbjct: 567 FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 196/440 (44%), Gaps = 7/440 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           ++  FN L+      ++I EA   F  +   G  P V   N L+  + R      A  LF
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           +EMA            +  T   ++    K G   +A+  F Q     +  D  +Y+ +I
Sbjct: 211 DEMAERR------IYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVI 264

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
             +C  +D + A +L     + G  PS  T+  ++    +     EA RL D MV   V 
Sbjct: 265 QAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVP 324

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            N     +L+ G+C+ G +N A  LF  +  +G   +   +++LI    K   VE+A  L
Sbjct: 325 VNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANEL 384

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           Y  M   G++PTV   N L  G  + + +E+A  L D    +G+A+   TY   +  LC+
Sbjct: 385 YTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIAS-VVTYNIVLLWLCE 443

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G + EA  L+  +        + +YN +I G CK G +  A E+   +    L PN +T
Sbjct: 444 LGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAIT 503

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           Y I+++G    G  + A ++F  M      P   TF+ +I+G  ++   S+  + L+   
Sbjct: 504 YTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFI 563

Query: 550 EKKVMPDASIVSIVVDLLVK 569
           ++  +P +   + ++D  VK
Sbjct: 564 KQSFIPTSMTYNCIIDGYVK 583


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 187/306 (61%), Gaps = 6/306 (1%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P  VTFN+++D LCK  K+ EA  ++  M+++GV PN  TY++LM+G+ L  ++  A 
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           ++F +M + GC  D +SYNILING CK + ++EA  ++ EM  +G+ P   TYNTL  G 
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           ++       ++LF +M   G + D  TY+ F+ GL K GY+ +A+ELFR ++      D+
Sbjct: 126 WK-----QKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LID +CKSG+L+ A ELF  L    L+P+V ++  +I GLC +G +D+A   F  
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE- 571
           ME +   PD  ++++++ GF++ N  S+  +L  +M ++    DA   ++  DLL K++ 
Sbjct: 241 MERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKDDN 300

Query: 572 ISLKSL 577
           + LK L
Sbjct: 301 LGLKRL 306



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 162/271 (59%), Gaps = 5/271 (1%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ VT++ ++D LCK+G + +A+ +   M ++ + P+ VTY+SL++G    N   EA+++
Sbjct: 8   PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  M+ +G  P V+++N++++  CK +++DEA ++ D M  RG+ PN  TYNTL+ GF  
Sbjct: 68  FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF-- 125

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
                +  +LF  M + GC  D V+Y+I ++G  K   +++AL L+REM +  + P +V 
Sbjct: 126 ---WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L   + +  ++E A +LF ++   G+  D R++T+ I GLC+ G + EA + FR + 
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQME 242

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
              C  D  +YN ++ G  ++     A +LF
Sbjct: 243 RDGCPPDCCSYNVIVRGFLQNNGASRAEQLF 273



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 161/293 (54%), Gaps = 11/293 (3%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + P+  T+NIL++  CK G++S        ++     PN  T++SL+ G   ++R+ EA 
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +F  +   GC P+V++YN LING C+      A  +F+EM+      G++  PNT TY+
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFR----GLI--PNTATYN 119

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++ G  K+        LF  M  +  +PD+VTY+  +HGL      ++A  LF EM + 
Sbjct: 120 TLLGGFWKQKI-----QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNN 174

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P +V +N+++D +CK+ K+++A  L   +  +G+ P+  ++ +++ G C  G ++ A
Sbjct: 175 YLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEA 234

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            + F  ME  GC  D  SYN+++ G+ +N     A  L++EM  +G     +T
Sbjct: 235 YKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALT 287



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 153/302 (50%), Gaps = 11/302 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+A TFN L+  L  + +I EA  +   +   G EPN +TY++L+NG       ++   +
Sbjct: 8   PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGY------LLQNRV 61

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
           FE     N  I   C P+ ++Y+ +I+G CK   +D+AK +F +M    + P+  TYN+L
Sbjct: 62  FEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTL 121

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           + G      W +  +LF +M  QG  P +VT+++ +  L K   +D+A  L   M    +
Sbjct: 122 LGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYL 176

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+   YN L+D  C  GK+  A ELF  +   G   D  S+  +I+G C+   ++EA  
Sbjct: 177 NPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYK 236

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
            +R+M   G  P   +YN +  G  + +    A +LF EM   G +AD  T T   D L 
Sbjct: 237 AFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLS 296

Query: 429 KN 430
           K+
Sbjct: 297 KD 298



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 156/287 (54%), Gaps = 11/287 (3%)

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           + +F   P+ +T+N L++ LC+ G    A  + + M     E GV  +PNTVTYS++++G
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMI----EKGV--EPNTVTYSSLMNG 54

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
              +  V +A+ +F  M      PDV++YN LI+G C A   +EAK++F EM  +G+ P+
Sbjct: 55  YLLQNRVFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPN 114

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
             T+N ++    K +      +L   M  +G  P+  TY+  + G    G +++A ELF 
Sbjct: 115 TATYNTLLGGFWKQK-----IQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFR 169

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M++     D V YNILI+  CK+ ++E+A  L+ ++  KG+ P V ++ ++  GL    
Sbjct: 170 EMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREG 229

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
            ++ A K F +M+RDG   D  +Y   + G  +N     A +LF+ +
Sbjct: 230 LLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEM 276



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 5/242 (2%)

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D V++NIL++  CK  ++ EA  + + M+ KG++P  VTY++L  G    ++V  A K+F
Sbjct: 9   DAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVF 68

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           + M   G   D  +Y   I+G CK   I EA ++F  +       +   YN L+ G  K 
Sbjct: 69  NAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQ 128

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
                  +LF  +      P++VTY+I + GL   G +D+A +LF +M+ N   PD++ +
Sbjct: 129 -----KIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIY 183

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
           ++LI    +  +     EL  K+  K ++PD    + ++  L +  +  ++  +F   ER
Sbjct: 184 NILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMER 243

Query: 586 QG 587
            G
Sbjct: 244 DG 245



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 5/198 (2%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M S  I P  VT+N L   L +  ++  A  +   M   GV  +T TY++ ++G      
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + EA ++F  +    C  D+ +YN LI+G CK+ R+  A ++F  +    L+PN  TYN 
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           ++ G        +   LF DM     +PD++T+ + +HG  +     +  EL  +M+   
Sbjct: 121 LLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY 175

Query: 553 VMPDASIVSIVVDLLVKN 570
           + PD  I +I++D + K+
Sbjct: 176 LNPDLVIYNILIDAMCKS 193



 Score = 43.1 bits (100), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 6/110 (5%)

Query: 65  PPVSSFNILLASLAKN-KHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +NIL+ ++ K+ K  D R     L+  GL P++ ++  +I+  C+ G +   + A
Sbjct: 178 PDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKA 237

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           F ++ R    P+  ++N +++G    +    A  LF ++   G   + +T
Sbjct: 238 FRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALT 287


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 207/381 (54%), Gaps = 9/381 (2%)

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
             ++++  +G  P V  YN LIN  C+ G    A  +F E+           +P TV+++
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFN 262

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I+GLCK   +D+   L   M++  I PDV TY+ LIHGLC     + A++LF EM  +
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G++P+ +TF  ++D   ++R+MD A      M+  GV+P+   YNTL++G C +G +N+A
Sbjct: 323 GLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M+ +G K D ++Y  LI+GYCK  ++E A+ + + M  +G+    V +  L  G
Sbjct: 383 RKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISG 442

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
                +V  A +   EM   G+  D  TYT  IDG CK G +    +L + ++I   +  
Sbjct: 443 FCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  YN L++GLCK G++K A  L  ++ +  + P+ +TYNI+++G C +G   KA DL  
Sbjct: 503 VITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLK 559

Query: 512 DMEENAAAPDVITFDMLIHGF 532
              E     D   +  L+  +
Sbjct: 560 LRNEKGLIVDYAYYTSLVSEY 580



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 200/387 (51%), Gaps = 13/387 (3%)

Query: 188 LFEEMANGNGEIGVVC----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           L ++M N N  + +             P    Y+ +I+  CKEG +  AK +F +++   
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P  V++N+LI+GLC + + +E  RL   M +  + P V T++V++  LCK  ++D A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L D M QRG+RPN  T+  L+DG     +++ A   +  M +MG K D V YN L+NG 
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK  +V +A  L  EM   G+KP  +TY TL  G  +   +E A+++   M  +GV  D 
Sbjct: 374 CKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             +T  I G C++G + +A    R +     + D   Y  +IDG CK G +K  ++L   
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKE 493

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +      P V+TYN+++ GLC  GQM  A  L   M      PD IT+++L+ G  +   
Sbjct: 494 MQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK--- 550

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVV 564
             K  +LL    EK ++ D +  + +V
Sbjct: 551 NGKAEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 191/375 (50%), Gaps = 9/375 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P +  YNILIN FCK G +    + F  I +    P   +FN+LI GL     + E 
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   ++     P+V TY+ LI+GLC+ G   +A  LF+EM           +PN +T+
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG------LRPNGITF 331

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +IDG  +   +D A   + QM    + PD+V YN+L++GLC   D N+A++L  EM  
Sbjct: 332 TALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKM 391

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G++P  +T+  ++D  CK   ++ A  +   M + GV  +   +  L+ GFC  G++  
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           AE     M   G K DD +Y ++I+GYCK   V+    L +EM   G KP V+TYN L  
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL +  Q+++A  L + M   GV  D  TY   ++G CKNG   +A +L +        +
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIV 568

Query: 451 DIQAYNCLIDGLCKS 465
           D   Y  L+    KS
Sbjct: 569 DYAYYTSLVSEYNKS 583



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 185/331 (55%)

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           P V  YN LI+  C      +AK +F E+  +G++P+ V+FN +++ LCK+R +DE  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
              M +  + P+  TY+ L+ G C  G+++ AE+LF  M+  G + + +++  LI+G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           ++ ++ A++ Y +M++ G+KP +V YNTL  GL ++  V  A KL DEM+  G+  D  T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           YTT IDG CK G +  A+E+ + +      LD  A+  LI G C+ GR++ A      + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + P+  TY ++I G C  G +     L  +M+ N   P VIT+++L++G  +  +  
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             N LL  M    V PD    +I+++   KN
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKN 551



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 184/349 (52%), Gaps = 6/349 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  IL   F P    +N LI     E  I +A  +F +++  G  P  +++NTLINGLC+
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           + +      L + M            P+  TYS +I GLCKEG +D A+ LF +M+   +
Sbjct: 271 SRNLDEGFRLKKTMEENR------IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL 324

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ +T+ +LI G   +   + A   + +M+  GV+P +V +N +++ LCK   +++A +
Sbjct: 325 RPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+D M   G++P+  TY TL+DG+C  G +  A E+   M   G   D+V++  LI+G+C
Sbjct: 385 LVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFC 444

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           ++  V +A    REMV  G+KP   TY  +  G  +   V+   KL  EMQ +G      
Sbjct: 445 RDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI 504

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           TY   ++GLCK G +  A  L   +  L    D   YN L++G CK+G+
Sbjct: 505 TYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 179/330 (54%), Gaps = 15/330 (4%)

Query: 65  PPVSSFNILLASLAKNKHYDT--RLNAT----GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   SFN L+  L K+++ D   RL  T     ++P+++TY++LI+  CK GR+ +    
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  + +    PN  TF +LI G +   R+  A   + ++   G +P+++ YNTL+NGLC+
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  L +EM        V  KP+ +TY+T+IDG CKEG ++ A  +   M +E +
Sbjct: 376 VGDVNKARKLVDEMKM------VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGV 429

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D V + +LI G C      +A+R   EM++ G++P   T+ +++D  CK   +    +
Sbjct: 430 VLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M   G +P   TYN LM+G C  G++  A  L  +M ++G   DD++YNIL+ G+C
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           KN + E+ L L  E   KG+      Y +L
Sbjct: 550 KNGKAEDLLKLRNE---KGLIVDYAYYTSL 576


>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
          Length = 548

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 196/349 (56%), Gaps = 1/349 (0%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF-N 281
           +D A   F  M D  +  D   Y  LI G C+  D  +AK L  +M+ +G+ P  + F  
Sbjct: 173 LDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFT 232

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I++ LCK  ++ E   ++DL++  G RPN  T+N+L+DG+CL+G +  A  L  SMES+
Sbjct: 233 SIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 292

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G + D  +YN L++GYCK+  +++AL+L+R+M+ K +  T V+YN +  GLF+  +   A
Sbjct: 293 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVA 352

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            ++F EM   G+A    TY T + GLC+N    EA  L   L  +  + DI  +N +I  
Sbjct: 353 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 412

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           + K GR++ A ELF ++    LVP ++TY +MI  L  +   + A +LF  ME++   PD
Sbjct: 413 MFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPD 472

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               + +I   +   E +K    L K+ +K ++P+A+  S+++ L   N
Sbjct: 473 SCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVN 521



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 159/315 (50%), Gaps = 10/315 (3%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F S+I  L  E R+ E   +   +   G  PN+IT+N+L++G C  G+   A+ L + M 
Sbjct: 231 FTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 290

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
           +    +GV  +P+  TY+T++DG CK G +D A  LF  M  + +    V+YN ++HGL 
Sbjct: 291 S----VGV--EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 344

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A     AK +F EM++ G+  S+ T+  ++  LC+N   DEA+ LL+ +    V+ +  
Sbjct: 345 QARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL 404

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T+N ++     +G++  A+ELF ++ + G     ++Y ++I    K +  E+A +L+  M
Sbjct: 405 TFNIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM 464

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
              G  P     N +   L    ++  A     ++ + G+  +  T +  I     NG  
Sbjct: 465 EKSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGKY 524

Query: 434 IEAVEL----FRTLR 444
            E ++L    +R LR
Sbjct: 525 REYIKLLPEKYRFLR 539



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 5/357 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R+ +A   F  +   G   +   Y  LI G C  G  + A  L  +M +       +  P
Sbjct: 172 RLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKG-----IPPP 226

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
               +++II+ LCKEG V + K +   +      P+++T+NSL+ G C   +  EA  L 
Sbjct: 227 CIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLL 286

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   GV+P + T+N ++D  CK+ ++D+A  L   M+ + V   + +YN ++ G    
Sbjct: 287 DSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQA 346

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
            +   A+E+F  M   G      +Y  ++ G C+N   +EA  L  ++ S  +K  ++T+
Sbjct: 347 RRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTF 406

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N +   +F++ +++ A +LF  +   G+     TY   I  L K     +A  LF ++  
Sbjct: 407 NIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEK 466

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
             C  D    N +I  L   G +  A      +    ++P   T +++I     +G+
Sbjct: 467 SGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGK 523



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 29/308 (9%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P +  +  +IN  CK GRV+ G      I+ +   PN  TFNSL+ G      + EA  L
Sbjct: 226 PCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 285

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI----------GVVC 203
              +++ G EP++ TYNTL++G C+ G    AL LF +M +    +          G+  
Sbjct: 286 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 345

Query: 204 KPNTV-------------------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
              TV                   TY+T++ GLC+    D+A  L  ++   N+  D++T
Sbjct: 346 ARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 405

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +N +I  +       EAK LF  +   G+ P+++T+ V++  L K    ++A  L   M 
Sbjct: 406 FNIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 465

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           + G  P++C  N ++      G+I +A      ++  G   +  + ++LI  +  N +  
Sbjct: 466 KSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 525

Query: 365 EALSLYRE 372
           E + L  E
Sbjct: 526 EYIKLLPE 533



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 136/281 (48%), Gaps = 1/281 (0%)

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY- 350
           ++D+A      M+  GV  +   Y  L+ G C  G + +A+EL   M S G     + + 
Sbjct: 172 RLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFF 231

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
             +IN  CK   V E   +   ++  G +P ++T+N+L  G   +  ++ A+ L D M+ 
Sbjct: 232 TSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES 291

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            GV  D  TY T +DG CK+G I +A+ LFR +   +  L   +YN ++ GL ++ R   
Sbjct: 292 VGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVV 351

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A E+F  +    +  ++ TY  ++ GLC +   D+A  L   +       D++TF+++I 
Sbjct: 352 AKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIR 411

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              ++    +  EL   +    ++P      +++  L+K E
Sbjct: 412 AMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 452



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 1/250 (0%)

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G   + +++ A E F  M  +G   D   Y  LI G C   ++ +A  L  +M+SKGI P
Sbjct: 166 GTGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPP 225

Query: 381 TVVTYNTLFL-GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
             + + T  +  L +  +V     + D +   G   +  T+ + +DG C  G + EAV L
Sbjct: 226 PCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 285

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
             ++  +  E DI  YN L+DG CK GR+  A  LF  + H  +    V+YNI++ GL  
Sbjct: 286 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 345

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
             +   A+++F +M E+  A  + T+  ++ G  R N   + N LL K+    V  D   
Sbjct: 346 ARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 405

Query: 560 VSIVVDLLVK 569
            +IV+  + K
Sbjct: 406 FNIVIRAMFK 415


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 236/482 (48%), Gaps = 10/482 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  +YNIL+   C  GR+      F  +      P+  T+  ++ G    S +  A  L 
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
           +++ A G E N + Y ++I  LC  G    A+ + E+M       GVV   +   ++T++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH----GVVL--DAAVFTTVM 362

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G C++G +  A+  F +M+   +  D VTY +LI+GLC A +  EA+R+  EM D+G+ 
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
              VT+ V++D  CK  KM EA  + + MVQ+ V PN  TY  L DG C  G +  A EL
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M S G + +  +YN LING CK   +E+A+    +M   G+KP V TY T+   L +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +++ A  L  EM   G+     TY   ++G C +G +     L   +       +   
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTT 602

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+   C    +K   E++  +    +VPN  TYNI+I+G C    M +A     +M 
Sbjct: 603 YNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI 662

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           E        +++ LI    +  + ++   L  KM+++++  +  + +  +DL   NE +L
Sbjct: 663 EKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSF-NEDNL 721

Query: 575 KS 576
           +S
Sbjct: 722 ES 723



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 210/411 (51%), Gaps = 17/411 (4%)

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           + +A L  +L+ +G  P+  + N +   LCR      A+ LF+E+           + NT
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLDE-AVQLFQELP----------EKNT 253

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +Y+ ++  LC  G +  A  LF +M      PDVVTY  ++HG C  ++   A +L  E
Sbjct: 254 CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  +G++ + V +  ++  LC   ++ +A R+++ MV  GV  +A  + T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A   F  M+  G   D V+Y  LING C+  E++EA  + +EM  KG+    VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  ++ ++  A  + ++M +  V  +  TYT   DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            EL+I  YN LI+GLCK+G L+ A      +    L P+V TY  +I  LC   ++D+A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            L  +M +    P ++T+++L++GF           LL  M EK + P+ +
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 207/448 (46%), Gaps = 39/448 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNI 101
            +A  +FD M     SPP V ++ I+      L+ L       + + A GL  N   Y  
Sbjct: 270 KDAHQLFDEM----ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I   C  G+VS        ++      +AA F +++ G   +  +  A   F +++  G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV---------CK-------- 204
              + +TY  LINGLCR G    A  + +EM +   ++  V         CK        
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN VTY+ + DGLCK+G V  A  L  +M  + +  ++ TYNSLI+GL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C A +  +A R  I+M + G++P V T+  I+  LC+++++D A  LL  M+ +G++P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN LM+GFC+ G++   + L   M       +  +YN L+  YC  K ++    +Y+ 
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+S+ + P   TYN L  G  +   ++ AL    EM   G      +Y   I  L K   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLID 460
             EA  LF  +R  +   +   YN  ID
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 200/416 (48%), Gaps = 13/416 (3%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  LF +L     E N  +YN L+  LC  G    A  LF+EMA+          P+ V
Sbjct: 240 EAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY  ++ G C    ++ A  L  +M    +  + V Y S+I  LC     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  GV      F  +M   C+   +  A    D M +RG+  +  TY  L++G C  G++
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             AE +   ME  G   D V+Y +LI+GYCK  ++ EA  ++ +MV K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +   V  A +L  EM   G+  +  TY + I+GLCK G + +A+     +     
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D+  Y  +I  LC+S  L  A  L   +    + P +VTYN+++ G C  G+++  + 
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           L   M E    P+  T++ L+  +          E+   M  ++V+P+ +  +I++
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 170/343 (49%), Gaps = 11/343 (3%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L L+++   I+P   + N+++  L      +EA +LF E+ ++    +  ++N+++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALC 264

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
              ++ +A +L D M      P+  TY  ++ G+C + ++  A +L   M + G + + V
Sbjct: 265 TAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y  +I   C   +V +A+ +  +MV  G+      + T+  G      +  A   FDEM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           Q+ G+AAD  TYT  I+GLC+ G + EA  + + +     ++D   Y  LIDG CK G++
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+ +   +    + PNVVTY  +  GLC  G +  A +L  +M       ++ T++ L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           I+G  +     +    +  M E  + PD    + ++  L +++
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 226/445 (50%), Gaps = 16/445 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN +I+ FCK+ R+        R+    F P+  T+N +I  L    ++  A  +
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYST 212
             +L    C P VITY  LI      G    A+ L EEM A G         P+  TY+ 
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-------LLPDMYTYNA 247

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           II G+CKEG V++A  L   +  +   PDV++YN L+    +   W+E ++L  EM  +G
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P+ VT+++++  LC+  ++DEA  +L +M+++ + P+  +Y+ L+   C  G+++ A 
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   M S GC  D V+YN ++   CKN    +AL ++ ++   G  P V +YNT+   L
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           +       AL +   M   GV  D  TY + I  LC++G + EA+ L   +        +
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 487

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            +YN ++ GLCK  R+  A  +F  +      PN  TY ++I+G+   G   +A    ++
Sbjct: 488 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA----ME 543

Query: 513 MEENAAAPDVITFDMLIHGFIRINE 537
           +  +  + DVI+ D     F R+N+
Sbjct: 544 LANSLFSRDVISQD----SFKRLNK 564



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 236/464 (50%), Gaps = 7/464 (1%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N  CK G+ +        ++   +TP+      LIKG      I +A+ +   L++  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 132

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+V  YN +I+G C+      A  +   M    G +     P+ VTY+ +I  LC   
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRM-KARGFL-----PDIVTYNIMIGSLCNRR 186

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +  A  +  Q+  +N  P V+TY  LI         NEA +L  EM+ +G+ P + T+N
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+  +CK   ++ A+ L+  +  +G +P+  +YN L+  F   GK +  E+L   M S 
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC+ + V+Y+ILI+  C+   ++EA+S+ + M+ K + P   +Y+ L   L +  +++ A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           + + D M  +G   D   Y T +  LCKNG   +A+E+F  LR + C  ++ +YN +I  
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L   G    A  +  ++    + P+ +TYN +I  LC DG +++A  L  DME++   P 
Sbjct: 427 LWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           VI++++++ G  ++        +  +M EK   P+ +   ++++
Sbjct: 487 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 530



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 212/437 (48%), Gaps = 6/437 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL S   P+   +N++I G    +RI  A  +  ++KA G  P+++TYN +I  LC    
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +AL + +++   N      C P  +TY+ +I+    EG +++A  L  +M    + PD
Sbjct: 188 LGLALKVLDQLLLDN------CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPD 241

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           + TYN++I G+C       A  L   +  +G +P V+++N+++       K DE  +L+ 
Sbjct: 242 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVA 301

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M  RG  PN  TY+ L+   C  G+I+ A  +   M       D  SY+ LI+  CK  
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A+ +   M+S G  P +V YNT+   L +      AL++F++++  G   +  +Y 
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 421

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I  L   G    A+ +   +     + D   YN LI  LC+ G ++ A  L   +   
Sbjct: 422 TMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 481

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P V++YNI++ GLC   ++D A  +F +M E    P+  T+ +LI G       ++ 
Sbjct: 482 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 541

Query: 542 NELLHKMKEKKVMPDAS 558
            EL + +  + V+   S
Sbjct: 542 MELANSLFSRDVISQDS 558



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 200/414 (48%), Gaps = 35/414 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N +++   K    +       R+ A G  P++ TYNI+I   C   ++ L    
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L     P   T+  LI+    E  I EA  L  ++ A G  P++ TYN +I G+C+
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
            G    A  L   + +   +  V+                             C+PN VT
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I  LC+ G +D+A ++   M ++ + PD  +Y+ LI  LC     + A  +   M+
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P +V +N I+  LCKN   ++A  + + +   G  PN  +YNT++      G  +
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  +  +M S G   D+++YN LI+  C++  VEEA+ L  +M   G +PTV++YN + 
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           LGL ++ +++ A+ +F EM   G   +  TY   I+G+   G+  EA+EL  +L
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 190/399 (47%), Gaps = 7/399 (1%)

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+N  C+ G    +L   E + N          P+ +  + +I G      ++KA  + +
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKG------YTPDVILCTKLIKGFFNFKNIEKASRV-M 126

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           ++ + +  PDV  YN++I G C  N    A ++   M  +G  P +VT+N+++  LC  R
Sbjct: 127 EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+  A ++LD ++     P   TY  L++   + G IN A +L   M + G   D  +YN
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I G CK   VE A  L   + SKG KP V++YN L        + +   KL  EM   
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  TY+  I  LC+ G I EA+ + + +   +   D  +Y+ LI  LCK GRL  A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +   +     +P++V YN ++  LC +G  ++A ++F  +      P+V +++ +I  
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                + S+   ++  M  K V PD    + ++  L ++
Sbjct: 427 LWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRD 465



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 12/282 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+NILL +      +D        + + G  PN  TY+ILI+  C+ GR+      
Sbjct: 275 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 334

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++    TP+  +++ LI  L  E R+  A  +   + + GC P+++ YNT++  LC+
Sbjct: 335 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 394

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   AL +F ++       G+ C PN  +Y+T+I  L   G   +A  +   M  + +
Sbjct: 395 NGNANQALEIFNKLR------GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGV 448

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD +TYNSLI  LC      EA  L  +M   G +P+V+++N+++  LCK R++D+A  
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 508

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           +   M+++G RPN  TY  L++G    G    A EL  S+ S
Sbjct: 509 MFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 550



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 160/333 (48%), Gaps = 1/333 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L++  C A  +NE+      ++++G  P V+    ++      + +++ASR+++++ +  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESH 132

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+   YN ++ GFC + +I  A ++   M++ G   D V+YNI+I   C  +++  AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            +  +++     PTV+TY  L         +  A+KL +EM   G+  D  TY   I G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK G +  A EL  +L    C+ D+ +YN L+      G+     +L   +      PN 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTY+I+I  LC  G++D+A  +   M E    PD  ++D LI    +         ++  
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           M     +PD    + ++  L KN  + ++L  F
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIF 405



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 7/147 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           N+A  IF+  LR    PP VSS+N ++++L         L       + G+ P+  TYN 
Sbjct: 399 NQALEIFN-KLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNS 457

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+C C+ G V         + +S F P   ++N ++ GL    RI +A  +F ++   G
Sbjct: 458 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 517

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNL 188
           C PN  TY  LI G+   G    A+ L
Sbjct: 518 CRPNETTYILLIEGIGFAGWRTEAMEL 544


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/441 (32%), Positives = 220/441 (49%), Gaps = 12/441 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   GL PN YTYN +I   CK G+V+        ++     P+   + +LI G      
Sbjct: 214 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 273

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-- 204
           +  A  LF +++     P+ ITY  +I GLC+TG  M A  LF EM         VCK  
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM---------VCKRL 324

Query: 205 -PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+ VTY+ +IDG CKEG + +A +L  QM    + P++VTY +L  GLC   + + A  
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  EM  +G++ ++ T+N +++ LCK   +D+A +L+  M   G  P+A TY TLMD +C
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
              ++ RA EL   M     +   V++N+L+NG+C +  +E+   L + M+ KGI P   
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN+L       + +    +++  M   GV  D  TY   I G CK   + EA  L R +
Sbjct: 505 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 564

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                 L + +YN LI G  K  +   A ELF  +    LV +   YNI      ++G+M
Sbjct: 565 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 624

Query: 504 DKARDLFLDMEENAAAPDVIT 524
           +   +L  +  E     D+ T
Sbjct: 625 ELTLELCDEAIEKCLVGDIQT 645



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 212/398 (53%), Gaps = 32/398 (8%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLN---ATGLFPNLYTYNILINCFCKIGRVSLGF 116
           + P+P   +   +LL    K    +  L    + G+ P+   Y  LI+ FCK+G VS  +
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
             F  + +   +P+  T+ ++I GL    R+MEA  LF ++     EP+ +TY  LI+G 
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338

Query: 177 CRTGHTMIALNLFEEM---------------ANGNGEIGVV----------CKP----NT 207
           C+ G    A +L  +M               A+G  + G V          C+     N 
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+++++GLCK G +D+A  L   M+    +PD VTY +L+   C + +   A  L  +
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M+D+ +QP+VVTFNV+M+  C +  +++  +LL  M+++G+ PNA TYN+L+  +C+   
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 518

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +    E++  M + G   D  +YNILI G+CK + ++EA  L+R+MV KG   TV +YN 
Sbjct: 519 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 578

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           L  G ++  +   A +LF++M+R+G+ AD   Y  F D
Sbjct: 579 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 210/414 (50%), Gaps = 6/414 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  +++  G +PN  TYN +I  LC+TG    A  +  EM      I     P+ V Y+T
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM------ISEGIAPDGVIYTT 263

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDG CK G V  A  LF +M+   I+PD +TY ++I GLC      EA +LF EM+ + 
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           ++P  VT+  ++D  CK  KM EA  L + M+Q G+ PN  TY  L DG C  G+++ A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           EL   M   G + +  +YN L+NG CK   +++A+ L ++M   G  P  VTY TL    
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  ++  A +L  +M    +     T+   ++G C +G + +  +L + +       + 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI   C    ++   E++  +    +VP+  TYNI+I+G C    M +A  L  D
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           M        V +++ LI GF +  +  +  EL  +M+ + ++ D  I +I  D+
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADI 617



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 216/452 (47%), Gaps = 13/452 (2%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM-------IALNLFEEMANGNGEIGVV 202
           A  LF K+  +G   +V + N  I+ L      +         L L EEM          
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKG------ 218

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
            KPN  TY+ +I  LCK G V +A+ +  +M  E I PD V Y +LI G C   + + A 
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           RLF EM  + + P  +T+  ++  LC+  ++ EA +L   MV + + P+  TY  L+DG+
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  GK+  A  L   M  MG   + V+Y  L +G CK  EV+ A  L  EM  KG++  +
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            TYN+L  GL +   ++ A+KL  +M+  G   D  TYTT +D  CK+  ++ A EL R 
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +   + +  +  +N L++G C SG L+   +L   +    ++PN  TYN +I+  C    
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 518

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           M    +++  M      PD  T+++LI G  +     +   L   M  K      S  + 
Sbjct: 519 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 578

Query: 563 VVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           ++    K +  L++   F    R+G V +  +
Sbjct: 579 LIKGFYKRKKFLEARELFEQMRREGLVADREI 610



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 19/384 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
           + A+ +FD M +   SP  ++ +  ++  L +       + A  LF         P+  T
Sbjct: 275 SSAYRLFDEMQKRKISPDFIT-YTAVICGLCQTGRV---MEADKLFHEMVCKRLEPDEVT 330

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y  LI+ +CK G++   F    ++L+   TPN  T+ +L  GL     +  A  L  ++ 
Sbjct: 331 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 390

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G E N+ TYN+L+NGLC+ G+   A+ L ++M            P+ VTY+T++D  C
Sbjct: 391 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH------PDAVTYTTLMDAYC 444

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   + +A  L  QM D  + P VVT+N L++G C +    + ++L   M+++G+ P+  
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           T+N ++ + C    M   + +   M  +GV P+  TYN L+ G C    +  A  L   M
Sbjct: 505 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 564

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
              G      SYN LI G+ K K+  EA  L+ +M  +G+      YN      ++  ++
Sbjct: 565 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 624

Query: 399 EHALKLFDEMQRDGVAADTRTYTT 422
           E  L+L DE     +  D +T  T
Sbjct: 625 ELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 85/214 (39%), Gaps = 42/214 (19%)

Query: 398 VEHALKLFD------------------------------------------EMQRDGVAA 415
           V  A KLFD                                          EMQ  G+  
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  TY   I  LCK G + EA  + R +       D   Y  LIDG CK G +  A+ LF
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + P+ +TY  +I GLC  G++ +A  LF +M      PD +T+  LI G+ + 
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  +   L ++M +  + P+    + + D L K
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 236/482 (48%), Gaps = 10/482 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  +YNIL+   C  GR+      F  +      P+  T+  ++ G    S +  A  L 
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
           +++ A G E N + Y ++I  LC  G    A+ + E+M       GVV   +   ++T++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH----GVVL--DAAVFTTVM 362

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G C++G +  A+  F +M+   +  D VTY +LI+GLC A +  EA+R+  EM D+G+ 
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
              VT+ V++D  CK  KM EA  + + MVQ+ V PN  TY  L DG C  G +  A EL
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M S G + +  +YN LING CK   +E+A+    +M   G+KP V TY T+   L +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +++ A  L  EM   G+     TY   ++G C +G +     L   +       +   
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTT 602

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+   C    +K   E++  +    +VPN  TYNI+I+G C    M +A     +M 
Sbjct: 603 YNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI 662

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           E        +++ LI    +  + ++   L  KM+++++  +  + +  +DL   NE +L
Sbjct: 663 EKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSF-NEDNL 721

Query: 575 KS 576
           +S
Sbjct: 722 ES 723



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 210/411 (51%), Gaps = 17/411 (4%)

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           + +A L  +L+ +G  P+  + N +   LCR      A+ LF+E+           + NT
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLDE-AVQLFQELP----------EKNT 253

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +Y+ ++  LC  G +  A  LF +M      PDVVTY  ++HG C  ++   A +L  E
Sbjct: 254 CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  +G++ + V +  ++  LC   ++ +A R+++ MV  GV  +A  + T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A   F  M+  G   D V+Y  LING C+  E++EA  + +EM  KG+    VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  ++ ++  A  + ++M +  V  +  TYT   DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            EL+I  YN LI+GLCK+G L+ A      +    L P+V TY  +I  LC   ++D+A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            L  +M +    P ++T+++L++GF           LL  M EK + P+ +
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 207/448 (46%), Gaps = 39/448 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNI 101
            +A  +FD M     SPP V ++ I+      L+ L       + + A GL  N   Y  
Sbjct: 270 KDAHQLFDEM----ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I   C  G+VS        ++      +AA F +++ G   +  +  A   F +++  G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV---------CK-------- 204
              + +TY  LINGLCR G    A  + +EM +   ++  V         CK        
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN VTY+ + DGLCK+G V  A  L  +M  + +  ++ TYNSLI+GL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C A +  +A R  I+M + G++P V T+  I+  LC+++++D A  LL  M+ +G++P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN LM+GFC+ G++   + L   M       +  +YN L+  YC  K ++    +Y+ 
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+S+ + P   TYN L  G  +   ++ AL    EM   G      +Y   I  L K   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLID 460
             EA  LF  +R  +   +   YN  ID
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 200/416 (48%), Gaps = 13/416 (3%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  LF +L     E N  +YN L+  LC  G    A  LF+EMA+          P+ V
Sbjct: 240 EAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY  ++ G C    ++ A  L  +M    +  + V Y S+I  LC     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  GV      F  +M   C+   +  A    D M +RG+  +  TY  L++G C  G++
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             AE +   ME  G   D V+Y +LI+GYCK  ++ EA  ++ +MV K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +   V  A +L  EM   G+  +  TY + I+GLCK G + +A+     +     
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D+  Y  +I  LC+S  L  A  L   +    + P +VTYN+++ G C  G+++  + 
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           L   M E    P+  T++ L+  +          E+   M  ++V+P+ +  +I++
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 170/343 (49%), Gaps = 11/343 (3%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L L+++   I+P   + N+++  L      +EA +LF E+ ++    +  ++N+++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALC 264

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
              ++ +A +L D M      P+  TY  ++ G+C + ++  A +L   M + G + + V
Sbjct: 265 TAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y  +I   C   +V +A+ +  +MV  G+      + T+  G      +  A   FDEM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           Q+ G+AAD  TYT  I+GLC+ G + EA  + + +     ++D   Y  LIDG CK G++
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+ +   +    + PNVVTY  +  GLC  G +  A +L  +M       ++ T++ L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           I+G  +     +    +  M E  + PD    + ++  L +++
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 239/473 (50%), Gaps = 24/473 (5%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +++L+ C C++  V      F  +    F P   T N ++  L   +RI  A   +  + 
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTII 214
               + NV T+N +IN LC+ G          ++    G +G++     KP  VTY+T++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEG----------KLKKAKGFLGIMEVFGIKPTIVTYNTLV 267

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G    G ++ A+ +  +MK +   PD+ TYN ++  +C+    +E  R   EM + G+ 
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLV 324

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P  V++N+++     N  ++ A    D MV++G+ P   TYNTL+ G  +  KI  AE L
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              +   G   D V+YNILINGYC++ + ++A +L+ EM++ GI+PT  TY +L   L  
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            ++   A +LF+++   G+  D     T +DG C  G +  A  L + + ++    D   
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA---RDLFL 511
           YNCL+ GLC  G+ + A EL   +    + P+ ++YN +I G    G    A   RD  L
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP-DASIVSIV 563
            +  N   P ++T++ L+ G  +  E     ELL +MK + ++P D+S  S++
Sbjct: 565 SLGFN---PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/401 (32%), Positives = 200/401 (49%), Gaps = 16/401 (3%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILI 103
           A+  +  M RM      V +FNI++        L K K +   +   G+ P + TYN L+
Sbjct: 209 AWVFYADMYRMEIKSN-VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV 267

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
             F   GR+    +    +    F P+  T+N ++  +  E R   A+ +  ++K  G  
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLV 324

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ ++YN LI G    G   +A    +EM       G+V  P   TY+T+I GL  E  +
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ----GMV--PTFYTYNTLIHGLFMENKI 378

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           + A+ L  +++++ I  D VTYN LI+G C   D  +A  L  EMM  G+QP+  T+  +
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  LC+  K  EA  L + +V +G++P+    NTLMDG C +G ++RA  L   M+ M  
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             DDV+YN L+ G C   + EEA  L  EM  +GIKP  ++YNTL  G  +    +HA  
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFM 558

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           + DEM   G      TY   + GL KN     A EL R ++
Sbjct: 559 VRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 212/439 (48%), Gaps = 9/439 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G +P   T N ++    ++ R+   ++ +  + R     N  TFN +I  L  E +
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + +A      ++ FG +P ++TYNTL+ G    G    A  +  EM +         +P+
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG------FQPD 294

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ I+  +C EG   +A  +  +MK+  + PD V+YN LI G  +  D   A     
Sbjct: 295 MQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ QG+ P+  T+N ++  L    K++ A  L+  + ++G+  ++ TYN L++G+C  G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              +A  L   M + G +    +Y  LI   C+  +  EA  L+ ++V KG+KP +V  N
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL  G   I  ++ A  L  EM    +  D  TY   + GLC  G   EA EL   ++  
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             + D  +YN LI G  K G  K A+ +   +      P ++TYN +++GL  + + + A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591

Query: 507 RDLFLDMEENAAAPDVITF 525
            +L  +M+     P+  +F
Sbjct: 592 EELLREMKSEGIVPNDSSF 610



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 188/373 (50%), Gaps = 23/373 (6%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N L+   +     +      + + + G  P++ TYN +++  C  GR S     
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS----- 312

Query: 119 FGRILRSC----FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
              +LR        P++ ++N LI+G      +  A A   ++   G  P   TYNTLI+
Sbjct: 313 --EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GL        A  L  E+     E G+V   ++VTY+ +I+G C+ G   KA AL  +M 
Sbjct: 371 GLFMENKIEAAEILIREIR----EKGIVL--DSVTYNILINGYCQHGDAKKAFALHDEMM 424

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + I P   TY SLI+ LC  N   EA  LF +++ +G++P +V  N +MD  C    MD
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  LL  M    + P+  TYN LM G C  GK   A EL G M+  G K D +SYN LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +GY K  + + A  +  EM+S G  PT++TYN L  GL +  + E A +L  EM+ +G+ 
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604

Query: 415 ADTRTYTTFIDGL 427
            +  ++ + I+ +
Sbjct: 605 PNDSSFCSVIEAM 617



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 237/524 (45%), Gaps = 62/524 (11%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           PP++S  ILL S+  ++ +     A  L P+L +  +L     K   ++  F+    + R
Sbjct: 43  PPITS-EILLESIRSSQWHIVEHVADKLTPSLVSTTLL--SLVKTPNLAFNFVNHIDLYR 99

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
             F                      A A+ +KL +    P  +T   L+  +  +    I
Sbjct: 100 LDFQTQCL-----------------AIAVISKLSS----PKPVT--QLLKEVVTSRKNSI 136

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
             NLF+E+   +  +      +T+ +  ++   C+   VD+A   F  MK++   P   T
Sbjct: 137 R-NLFDELVLAHDRLET---KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTET 192

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            N ++  L   N    A   + +M    ++ +V TFN++++ LCK  K+ +A   L +M 
Sbjct: 193 CNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIME 252

Query: 305 QRGVRPNACTYNTLMDGFCLMGKIN--------------------------------RAE 332
             G++P   TYNTL+ GF L G+I                                 RA 
Sbjct: 253 VFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS 312

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E+   M+ +G   D VSYNILI G   N ++E A +   EMV +G+ PT  TYNTL  GL
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F  +++E A  L  E++  G+  D+ TY   I+G C++G   +A  L   +     +   
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  LI  LC+  + + A ELF  +    + P++V  N ++ G C  G MD+A  L  +
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           M+  +  PD +T++ L+ G     +  +  EL+ +MK + + PD
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 156/345 (45%), Gaps = 41/345 (11%)

Query: 259 NEAKRLFIEMM---DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
           N  + LF E++   D+    S + F++++   C+ R +DEA     LM ++G  P   T 
Sbjct: 134 NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC 193

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N ++     + +I  A   +  M  M  K +  ++NI+IN  CK  ++++A      M  
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            GIKPT+VTYNTL  G     ++E A  +  EM+  G   D +TY   +  +C  G    
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---R 310

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL---------------FCSLPH 480
           A E+ R ++ +    D  +YN LI G   +G L+ A+                 + +L H
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370

Query: 481 GVLVPN--------------------VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G+ + N                     VTYNI+I G C  G   KA  L  +M  +   P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
              T+  LI+   R N+  + +EL  K+  K + PD  +++ ++D
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 267/567 (47%), Gaps = 36/567 (6%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIG 110
           M+  +   P + S+N LL+   K   +   L         G+  ++ TYN+ I+  C+  
Sbjct: 200 MMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNS 259

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           R + G++   ++     TPN  ++N+LI G   E +I  A  +F ++      PN+ITYN
Sbjct: 260 RSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYN 319

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGE-----IGVVCKP-------------------- 205
            LING C  G+   AL + + M   +       IG +                       
Sbjct: 320 ILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCIN 379

Query: 206 ----NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
               N ++++ +IDGLC+ G +D+A  L ++M  + ++PD++T++ LI+G C   + N+A
Sbjct: 380 RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKA 439

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           K +  ++  +G  P+ V F+ ++   CK   + EA +    M   G   +  T N+L+  
Sbjct: 440 KEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVAS 499

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  GK+  AEE    +  +G   + V+++ +INGY    +   A S++  M+S G  P+
Sbjct: 500 LCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPS 559

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TY +L   L +      A KL  ++    +A DT +Y T I  + K+G ++EAV LF 
Sbjct: 560 PFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE 619

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG-VLVPNVVTYNIMIQGLCND 500
            +       D   Y C++ GL + GRL  A+     L    +L  N + Y   I GL   
Sbjct: 620 EMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKA 679

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           GQ   A  LF +MEE   + D+I  + +  G+ R+ +    + L+ K + K V+P+ +  
Sbjct: 680 GQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTF 739

Query: 561 SIVVDLLVKNEISLKSLPSFLVQERQG 587
           +I++    + +  +     + +  R G
Sbjct: 740 NILLHGYSRGQDIMSCFKLYNLMRRSG 766



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 232/465 (49%), Gaps = 20/465 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++YT N+++    K  R  L +  F ++L S   PN ++FN LI  L  + ++ +A
Sbjct: 135 GFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKA 194

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNT 207
             + T ++  G  P +++YNTL++  C+ G    AL L   M          CK    + 
Sbjct: 195 VNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME---------CKGIQADV 245

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+  ID LC+     +   +  +M+++ I P+ V+YN+LI+G         A R+F E
Sbjct: 246 CTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNE 305

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++  + P+++T+N++++  C N   +EA R+LD+M    VRPN  T  TL++G     K
Sbjct: 306 MIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAK 365

Query: 328 INRAEELFG----SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            + A  +      +  S+ C    +S+ ++I+G C+N  ++EA  L  EM   G+ P ++
Sbjct: 366 FDVARNILERYCINRTSLNC----ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDII 421

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T++ L  G  ++  +  A ++  ++ R+G   +   ++T I   CK G + EA++ +  +
Sbjct: 422 TFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAM 481

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
            +     D    N L+  LC++G+L  A E    +    LVPN VT++ +I G  N G  
Sbjct: 482 NLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDG 541

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             A  +F  M      P   T+  L+    +     +  +LL K+
Sbjct: 542 SGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 251/511 (49%), Gaps = 12/511 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N+++AS+ KN        +  ++  + + PN+ ++NILI+  C  G++      
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNI 197

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + R+ + P   ++N+L+     + R   A  L   ++  G + +V TYN  I+ LCR
Sbjct: 198 LTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCR 257

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              +     + ++M N       +  PN V+Y+T+I+G  KEG +  A  +F +M + N+
Sbjct: 258 NSRSAQGYLVLKKMRNK------MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P+++TYN LI+G C   ++ EA R+   M    V+P+ VT   +++ L K+ K D A  
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARN 371

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L+         N  ++  ++DG C  G ++ A +L   M   G   D +++++LING+C
Sbjct: 372 ILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFC 431

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   + +A  +  ++  +G  P  V ++TL     ++  V  A+K +  M  +G  AD  
Sbjct: 432 KVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNF 491

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T  + +  LC+NG ++EA E    +  +    +   ++C+I+G    G    A+ +F  +
Sbjct: 492 TCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRM 551

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+  TY  +++ LC      +AR L   +     A D I+++ LI    +    
Sbjct: 552 ISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNL 611

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +   L  +M +  ++PD+   + ++  L++
Sbjct: 612 LEAVRLFEEMIQNNILPDSYTYTCILSGLIR 642



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 235/530 (44%), Gaps = 71/530 (13%)

Query: 71   NILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
            N L+ASL +N      + +   ++  GL PN  T++ +IN +  +G  S  F  F R++ 
Sbjct: 494  NSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMIS 553

Query: 125  SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
                P+  T+ SL+K L       EA  L  KL       + I+YNTLI  + ++G+ + 
Sbjct: 554  CGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLE 613

Query: 185  ALNLFEEMANGN----------------GEIGVVCK--------------PNTVTYSTII 214
            A+ LFEEM   N                 E  +VC                N++ Y+  I
Sbjct: 614  AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 215  DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            DGL K G    A  LF +M+++ ++ D++  NS+  G         A  L  +  ++ V 
Sbjct: 674  DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 275  PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            P++ TFN+++    + + +    +L +LM + G  PN  TY++L+ G C  G +    ++
Sbjct: 734  PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 335  FGSMESMGCKHDDVSYNILINGYCK---------------------NKEVEEALS--LYR 371
                 +     DD+++N+LI   C+                     +K+ ++A++  L R
Sbjct: 794  LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 372  EMVS------------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
             MVS            KG  PT   Y T+   +  +  ++ A KL D+M   G++ D   
Sbjct: 854  RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 420  YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
                + GL   G I EA+ + + +  +K       +  L+   CK    K A  L   + 
Sbjct: 914  ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILME 973

Query: 480  HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            H  +  ++V YN++I   C +G +  A D + ++++    P++ T+ +L+
Sbjct: 974  HYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 175/369 (47%), Gaps = 6/369 (1%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  N   ++ LI    R G    A+N F  M           KP+  T + I+  + K  
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG------FKPSVYTCNMIMASMVKNC 154

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
                 + F QM    + P+V ++N LI  LC      +A  +   M   G  P++V++N
Sbjct: 155 RAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   CK  +   A  L+  M  +G++ + CTYN  +D  C   +  +   +   M + 
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               ++VSYN LING+ K  ++  A  ++ EM+   + P ++TYN L  G       E A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L++ D M+ + V  +  T  T ++GL K+     A  +     I +  L+  ++  +IDG
Sbjct: 335 LRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDG 394

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC++G L  A++L   +    + P+++T++++I G C  G ++KA+++   +      P+
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPN 454

Query: 522 VITFDMLIH 530
            + F  LI+
Sbjct: 455 NVIFSTLIY 463



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 159/361 (44%), Gaps = 37/361 (10%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NP V  ++ LI           A   F  M+ +G +PSV T N+IM  + KN +      
Sbjct: 104 NPAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M+   V PN  ++N L+   C+ GK+ +A  +   ME  G     VSYN L++  C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K    + AL L   M  KGI+  V TYN     L    +      +  +M+   +  +  
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y T I+G  K G I  A  +F  +  L    ++  YN LI+G C +G  + A  +   +
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341

Query: 479 PHGVLVPNVVT-----------------------------------YNIMIQGLCNDGQM 503
               + PN VT                                   + +MI GLC +G +
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLL 401

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A  L ++M ++   PD+ITF +LI+GF ++   +K  E++ K+  +  +P+  I S +
Sbjct: 402 DEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 564 V 564
           +
Sbjct: 462 I 462



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/468 (22%), Positives = 176/468 (37%), Gaps = 114/468 (24%)

Query: 59   RMHPSPPPVS--SFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFC 107
            ++H  P  V   S+N L+  ++K+ +    L A  LF         P+ YTY  +++   
Sbjct: 585  KLHCIPLAVDTISYNTLIVEISKSGNL---LEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 108  KIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
            + GR+   FI  GR++ +   T N+  +   I GL    +   A  LF +++  G   ++
Sbjct: 642  REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 167  ITYNTLINGLCRTGHTMIALNLFEEMANGN-----------------GEIGVVCK----- 204
            I  N++ +G  R G    A +L  +  N N                 G+  + C      
Sbjct: 702  IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 205  -------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                   PN +TY ++I GLC  G ++    +      E+   D +T+N LI   C  ND
Sbjct: 762  MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821

Query: 258  WNE--------------------------------AKRLFI---EMMDQGVQPSVVTFNV 282
             ++                                ++  F+   EM+ +G  P+   +  
Sbjct: 822  LDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881

Query: 283  IMDELCKNRKMDEASRLLDLMVQRGVR--------------------------------- 309
            +M  +C+   +  A +L D MV  G+                                  
Sbjct: 882  MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941

Query: 310  --PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              P   T+ TLM  FC       A  L   ME    K D V+YN+LI+  C N +V  AL
Sbjct: 942  KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITAL 1001

Query: 368  SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
              Y E+  KG+ P + TY  L   +   H V     +  ++   G+ +
Sbjct: 1002 DFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVS 1049



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 124/260 (47%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N   ++ L+  +   G +  A   F SM   G K    + N+++    KN       S +
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFF 163

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           ++M++  + P V ++N L   L    +++ A+ +   M+R+G      +Y T +   CK 
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G    A+ L   +     + D+  YN  ID LC++ R    + +   + + ++ PN V+Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSY 283

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +I G   +G++  A  +F +M E   +P++IT+++LI+G+       +   +L  M+ 
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEA 343

Query: 551 KKVMPDASIVSIVVDLLVKN 570
             V P+   +  +++ L K+
Sbjct: 344 NDVRPNEVTIGTLLNGLYKS 363


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 241/490 (49%), Gaps = 27/490 (5%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN----AATFNSLIKGLHAESRIM 148
           F +  T+N++I+   K      GF  + +IL      N      TF+ LI          
Sbjct: 93  FRSWVTHNLVIDMLAKDD----GFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAE 148

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A   F K+K FGC+P+V TYN++++ + +    ++AL ++ +M   N        PN  
Sbjct: 149 KAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY------NPNRA 202

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T+  +++GLCK G  D A  +F +M  + I P+ + Y  ++ GLC A   ++  RL   M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G  P  +T N ++D  CK  ++DEA  LL L  + G       Y++L+DG     + 
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           +  +E    M   G + D V Y ILI G+C+   V+ AL++  +M  +G+ P    YN L
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  ++  ++ A  L  E+ ++     + TYT  I G+C+NG + EA ++F  +  L C
Sbjct: 383 IKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGC 442

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-------------LVPNVVTYNIMIQ 495
              I  +N LIDGLCK+G L+ A  LF  +  G               V +  +   M++
Sbjct: 443 SPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVE 502

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            LC  G + KA  L + + ++   PD++T+++LI+GF +    +   +L  +++ K   P
Sbjct: 503 RLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSP 562

Query: 556 DASIVSIVVD 565
           D+     ++D
Sbjct: 563 DSVTYGTLID 572



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 264/565 (46%), Gaps = 42/565 (7%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYN 100
           P   F  F +  R       V+  N+++  LAK+  +DT       L  + +     T++
Sbjct: 77  PELGFRFFIWTTRRRSFRSWVTH-NLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFS 135

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +LI  + K G       +FG++      P+  T+NS++  +  +   + A A++ ++   
Sbjct: 136 VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL 195

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
              PN  T+  L+NGLC+ G T  AL +F+EM     + G+   PNT+ Y+ I+ GLC+ 
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMT----QKGI--PPNTMIYTIILSGLCQA 249

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              D    L   MK     PD +T N+L+ G C     +EA  L      +G    +  +
Sbjct: 250 KRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGY 309

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++D L + ++ DE       M + G+ P+   Y  L+ GFC +G ++ A  +   M  
Sbjct: 310 SSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQ 369

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   D   YN LI G+C    +++A SL  E+      PT  TY  L  G+     ++ 
Sbjct: 370 RGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDE 429

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE----------- 449
           A ++F++M+  G +    T+   IDGLCK G + EA  LF  + I K             
Sbjct: 430 ARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGAD 489

Query: 450 --LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
             +D  +   +++ LC+SG +  A++L   L    +VP+++TYN++I G C    ++ A 
Sbjct: 490 RVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAF 549

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI-------- 559
            LF +++    +PD +T+  LI GF R++       +L +M +    P +++        
Sbjct: 550 KLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWS 609

Query: 560 -----VSIVVDLLVKNEISLKSLPS 579
                +S+   L +K    L+SLPS
Sbjct: 610 CRKGKLSVAFSLWLK---YLRSLPS 631



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 240/518 (46%), Gaps = 62/518 (11%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           ++A  +FD M +    PP    + I+L+ L + K  D        +  +G  P+  T N 
Sbjct: 218 DDALKMFDEMTQ-KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++ FCK+G++   F       +  +      ++SLI GL    R  E      K+   G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+V+ Y  LI G C  G    ALN+  +M            P+T  Y+ +I G C  G
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG------LSPDTYCYNALIKGFCDVG 390

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +DKA++L L++   +  P   TY  LI G+C     +EA+++F +M + G  PS++TFN
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRP--------------NACTYNTLMDGFCLMGK 327
            ++D LCK  +++EA  L   M + G  P              +  +  T+++  C  G 
Sbjct: 451 ALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGL 509

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I +A +L   +   G   D ++YN+LING+CK K +  A  L+RE+  KG  P  VTY T
Sbjct: 510 ILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGT 569

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF------- 440
           L  G   + + E A ++ D+M ++G    +  Y   +   C+ G +  A  L+       
Sbjct: 570 LIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSL 629

Query: 441 -----RTLRI-------------LKCELD---------IQAYNCLIDGLCKSGRLKFAWE 473
                 TL++             ++C L+         I  Y   + GLC++ R + A +
Sbjct: 630 PSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALK 689

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +F  L    +  N  +  ++I GLC DG ++ A D+FL
Sbjct: 690 IFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFL 727



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 19/268 (7%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L  +G+ P++ TYN+LIN FCK   ++  F  F  +     +P++ T+ +LI G H   
Sbjct: 519 QLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVD 578

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF----EEMANGNGEIGV 201
           R  +A  +  ++   GC P+   Y  L+   CR G   +A +L+      + +   E   
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK 638

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           + + +            ++G ++KA    L+M  +  N ++  Y   + GLC A    EA
Sbjct: 639 LAEEHF-----------EKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEA 687

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG--VRPNACTYNTLM 319
            ++F+ + +  +  +  +  ++++ LCK+  ++ A  +    +++G  + P  C  N L+
Sbjct: 688 LKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRIC--NQLL 745

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDD 347
               L  K+  A +L   M S G   D+
Sbjct: 746 RSLILQDKMKHALDLLNRMNSAGYDLDE 773


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 266/567 (46%), Gaps = 36/567 (6%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIG 110
           M+  +   P + S+N LL+   K   +   L         G+  ++ TYN+ I+  C+  
Sbjct: 200 MMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNS 259

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
           R + G++   ++     TPN  ++N+LI G   E +I  A  +F ++      PN+ITYN
Sbjct: 260 RSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYN 319

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGE-----IGVVCKP-------------------- 205
            LING C  G+   AL L + M   +       IG +                       
Sbjct: 320 ILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSIN 379

Query: 206 ----NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
               N ++++ +IDGLC+ G +D+A  L ++M  + + PD++T++ LI+G C   + N+A
Sbjct: 380 RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKA 439

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           K +  ++  +G  P+ V F+ ++   CK   + E  +    M   G   +  T N+L+  
Sbjct: 440 KEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVAS 499

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
            C  GK+  AEE    +  +G   + V+++ +INGY    +   A S++ +M+S G  P+
Sbjct: 500 LCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPS 559

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
             TY +L   L +      A KL  ++    +A DT +Y T I  + K+G ++EAV LF 
Sbjct: 560 PFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFE 619

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG-VLVPNVVTYNIMIQGLCND 500
            +       D   Y C++ GL + GRL  A+     L    +L  N + Y   I GL   
Sbjct: 620 EMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKA 679

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           GQ   A  LF +MEE   + D+I  + +  G+ R+ +    + L+ K + K V+P+ +  
Sbjct: 680 GQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTF 739

Query: 561 SIVVDLLVKNEISLKSLPSFLVQERQG 587
           +I++    + +  +     + +  R G
Sbjct: 740 NILLHGYSRGQDIMSCFKLYNLMRRSG 766



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 228/461 (49%), Gaps = 12/461 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++YT N+++    K  R  L +  F ++L S   PN ++FN LI  L  + ++ +A
Sbjct: 135 GFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKA 194

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNT 207
             + T ++  G  P +++YNTL++  C+ G    AL L   M          CK    + 
Sbjct: 195 VNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME---------CKGIQADV 245

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+  ID LC+     +   +  +M+++ I P+ V+YN+LI+G         A R+F E
Sbjct: 246 CTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNE 305

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++  + P+++T+N++++  C N   +EA RLLD+M    VRPN  T  TL++G     K
Sbjct: 306 MIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAK 365

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            + A  +           + +S+ ++I+G C+N  ++EA  L  EM   G+ P ++T++ 
Sbjct: 366 FDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSV 425

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  ++  +  A ++  ++ R+G   +   ++T I   CK G + E ++ +  + +  
Sbjct: 426 LINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNG 485

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
              D    N L+  LC++G+L  A E    +    LVPN VT++ +I G  N G    A 
Sbjct: 486 QNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAF 545

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            +F  M      P   T+  L+    +     +  +LL K+
Sbjct: 546 SVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL 586



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 250/511 (48%), Gaps = 12/511 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N+++AS+ KN        +  ++  + + PN+ ++NILI+  C  G++      
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNI 197

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + R+ + P   ++N+L+     + R   A  L   ++  G + +V TYN  I+ LCR
Sbjct: 198 LTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCR 257

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              +     + ++M N       +  PN V+Y+T+I+G  KEG +  A  +F +M + N+
Sbjct: 258 NSRSAQGYLVLKKMRNK------MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +P+++TYN LI+G C   ++ EA RL   M    V+P+ VT   +++ L K+ K D A  
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARN 371

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L+         N  ++  ++DG C  G ++ A +L   M   G   D +++++LING+C
Sbjct: 372 ILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFC 431

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   + +A  +  ++  +G  P  V ++TL     ++  V   +K +  M  +G  AD  
Sbjct: 432 KVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNF 491

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T  + +  LC+NG ++EA E    +  +    +   ++C+I+G    G    A+ +F  +
Sbjct: 492 TCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKM 551

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
                 P+  TY  +++ LC      +AR L   +     A D I+++ LI    +    
Sbjct: 552 ISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNL 611

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +   L  +M +  ++PD+   + ++  L++
Sbjct: 612 LEAVRLFEEMIQNNILPDSYTYTCILSGLIR 642



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 235/530 (44%), Gaps = 71/530 (13%)

Query: 71   NILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
            N L+ASL +N      + +   ++  GL PN  T++ +IN +  +G  S  F  F +++ 
Sbjct: 494  NSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMIS 553

Query: 125  SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
                P+  T+ SL+K L       EA  L  KL       + I+YNTLI  + ++G+ + 
Sbjct: 554  CGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLE 613

Query: 185  ALNLFEEMANGN----------------GEIGVVCK--------------PNTVTYSTII 214
            A+ LFEEM   N                 E  +VC                N++ Y+  I
Sbjct: 614  AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 215  DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            DGL K G    A  LF +M+++ ++ D++  NS+  G         A  L  +  ++ V 
Sbjct: 674  DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 275  PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            P++ TFN+++    + + +    +L +LM + G  PN  TY++L+ G C  G +    ++
Sbjct: 734  PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 335  FGSMESMGCKHDDVSYNILINGYCK---------------------NKEVEEALS--LYR 371
                 +     DD+++N+LI   C+                     +K+ ++A++  L R
Sbjct: 794  LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 372  EMVS------------KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
             MVS            KG  PT   Y T+   +  +  ++ A KL D+M   G++ D   
Sbjct: 854  RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 420  YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
                + GL   G I EA+ + + +  +K       +  L+   CK    K A  L   + 
Sbjct: 914  ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILME 973

Query: 480  HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            H  +  ++V YN++I   C +G +  A D + ++++    P++ T+ +L+
Sbjct: 974  HYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 174/369 (47%), Gaps = 6/369 (1%)

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
           C  N   ++ LI    R G    A+N F  M           KP+  T + I+  + K  
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG------FKPSVYTCNMIMASMVKNC 154

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
                   F QM    + P+V ++N LI  LC      +A  +   M   G  P++V++N
Sbjct: 155 RAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYN 214

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++   CK  +   A  L+  M  +G++ + CTYN  +D  C   +  +   +   M + 
Sbjct: 215 TLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNK 274

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               ++VSYN LING+ K  ++  A  ++ EM+   + P ++TYN L  G       E A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           L+L D M+ + V  +  T  T ++GL K+     A  +     I +  L+  ++  +IDG
Sbjct: 335 LRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDG 394

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LC++G L  A++L   +    + P+++T++++I G C  G ++KA+++   +      P+
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPN 454

Query: 522 VITFDMLIH 530
            + F  LI+
Sbjct: 455 NVIFSTLIY 463



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 159/361 (44%), Gaps = 37/361 (10%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NP V  ++ LI           A   F  M+ +G +PSV T N+IM  + KN +      
Sbjct: 104 NPAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
               M+   V PN  ++N L+   C+ GK+ +A  +   ME  G     VSYN L++  C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K    + AL L   M  KGI+  V TYN     L    +      +  +M+   +  +  
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y T I+G  K G I  A  +F  +  L    ++  YN LI+G C +G  + A  L   +
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341

Query: 479 PHGVLVPNVVT-----------------------------------YNIMIQGLCNDGQM 503
               + PN VT                                   + +MI GLC +G +
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLL 401

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A  L ++M ++   PD+ITF +LI+GF ++   +K  E++ K+  +  +P+  I S +
Sbjct: 402 DEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 564 V 564
           +
Sbjct: 462 I 462



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 142/296 (47%), Gaps = 2/296 (0%)

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+V  F++++    +   +  A      M+ RG +P+  T N +M       + +     
Sbjct: 105 PAV--FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXF 162

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  M +     +  S+NILI+  C   ++++A+++   M   G  PT+V+YNTL     +
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             + + AL L   M+  G+ AD  TY  FID LC+N    +   + + +R      +  +
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN LI+G  K G++  A  +F  +    L PN++TYNI+I G C +G  ++A  L   ME
Sbjct: 283 YNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVME 342

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            N   P+ +T   L++G  +  +      +L +    +   +    ++++D L +N
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRN 398



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/468 (22%), Positives = 176/468 (37%), Gaps = 114/468 (24%)

Query: 59   RMHPSPPPVS--SFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFC 107
            ++H  P  V   S+N L+  ++K+ +    L A  LF         P+ YTY  +++   
Sbjct: 585  KLHCIPLAVDTISYNTLIVEISKSGNL---LEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 108  KIGRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
            + GR+   FI  GR++ +   T N+  +   I GL    +   A  LF +++  G   ++
Sbjct: 642  REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 167  ITYNTLINGLCRTGHTMIALNLFEEMANGN-----------------GEIGVVCK----- 204
            I  N++ +G  R G    A +L  +  N N                 G+  + C      
Sbjct: 702  IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 205  -------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                   PN +TY ++I GLC  G ++    +      E+   D +T+N LI   C  ND
Sbjct: 762  MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821

Query: 258  WNE--------------------------------AKRLFI---EMMDQGVQPSVVTFNV 282
             ++                                ++  F+   EM+ +G  P+   +  
Sbjct: 822  LDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881

Query: 283  IMDELCKNRKMDEASRLLDLMVQRGVR--------------------------------- 309
            +M  +C+   +  A +L D MV  G+                                  
Sbjct: 882  MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941

Query: 310  --PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              P   T+ TLM  FC       A  L   ME    K D V+YN+LI+  C N +V  AL
Sbjct: 942  KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITAL 1001

Query: 368  SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
              Y E+  KG+ P + TY  L   +   H V     +  ++   G+ +
Sbjct: 1002 DFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVS 1049



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 123/260 (47%)

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N   ++ L+  +   G +  A   F SM   G K    + N+++    KN         +
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           ++M++  + P V ++N L   L    +++ A+ +   M+R+G      +Y T +   CK 
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G    A+ L   +     + D+  YN  ID LC++ R    + +   + + ++ PN V+Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSY 283

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N +I G   +G++  A  +F +M E   +P++IT+++LI+G+       +   LL  M+ 
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEA 343

Query: 551 KKVMPDASIVSIVVDLLVKN 570
             V P+   +  +++ L K+
Sbjct: 344 NDVRPNEVTIGTLLNGLYKS 363


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 235/482 (48%), Gaps = 10/482 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  +YNIL+   C  GR+      F  +      P+  T+  ++ G    S +  A  L 
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
           +++ A G E N + Y ++I  LC  G    A+ + E+M       GVV   +   ++T++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH----GVVL--DAAVFTTVM 362

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G C++G +  A+  F +M+   +  D VTY +LI+GLC A +  EA+R+  EM D+G+ 
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
              VT+ V++D  CK  KM EA  + + MVQ+ V PN  TY  L DG C  G +  A EL
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M S G + +  +YN LING CK   +E+A+    +M   G+KP V TY T+   L +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +++ A  L  EM   G+     TY   ++G C +G +     L   +       +   
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTT 602

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+   C    +K   E++  +    +VPN  TYNI+I+G C    M +A     +M 
Sbjct: 603 YNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMI 662

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
           E        +++ LI    +  + ++   L  KM++ ++  +  + +  +DL   NE +L
Sbjct: 663 EKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSF-NEDNL 721

Query: 575 KS 576
           +S
Sbjct: 722 ES 723



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 210/411 (51%), Gaps = 17/411 (4%)

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           + +A L  +L+ +G  P+  + N +   LCR      A+ LF+E+           + NT
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLDE-AVQLFQELP----------EKNT 253

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +Y+ ++  LC  G +  A  LF +M      PDVVTY  ++HG C  ++   A +L  E
Sbjct: 254 CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M  +G++ + V +  ++  LC   ++ +A R+++ MV  GV  +A  + T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A   F  M+  G   D V+Y  LING C+  E++EA  + +EM  KG+    VTY  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  ++ ++  A  + ++M +  V  +  TYT   DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            EL+I  YN LI+GLCK+G L+ A      +    L P+V TY  +I  LC   ++D+A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            L  +M +    P ++T+++L++GF           LL  M EK + P+ +
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 189/349 (54%), Gaps = 6/349 (1%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           LA  +++   +   GL  +  TY  LIN  C+ G +         +       +A T+  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           LI G     ++ EA  +  K+      PNV+TY  L +GLC+ G    A  L  EM +  
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            E+      N  TY+++I+GLCK G +++A    + M +  + PDV TY ++I  LC + 
Sbjct: 491 LEL------NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           + + A  L  EM+D+G++P++VT+NV+M+  C + +++   RLL+ M+++ + PN  TYN
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +LM  +C+   +    E++  M S     ++ +YNILI G+CK + ++EAL  + EM+ K
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           G + T  +YN L   L +  +   A +LF++M++D + A+   Y  +ID
Sbjct: 665 GFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYID 713



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 207/448 (46%), Gaps = 39/448 (8%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNI 101
            +A  +FD M     SPP V ++ I+      L+ L       + + A GL  N   Y  
Sbjct: 270 KDAHQLFDEM----ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTS 325

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I   C  G+VS        ++      +AA F +++ G   +  +  A   F +++  G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV---------CK-------- 204
              + +TY  LINGLCR G    A  + +EM +   ++  V         CK        
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       PN VTY+ + DGLCK+G V  A  L  +M  + +  ++ TYNSLI+GL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C A +  +A R  I+M + G++P V T+  I+  LC+++++D A  LL  M+ +G++P  
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYN LM+GFC+ G++   + L   M       +  +YN L+  YC  K ++    +Y+ 
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M+S+ + P   TYN L  G  +   ++ AL    EM   G      +Y   I  L K   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLID 460
             EA  LF  +R  +   +   YN  ID
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYID 713



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 200/416 (48%), Gaps = 13/416 (3%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  LF +L     E N  +YN L+  LC  G    A  LF+EMA+          P+ V
Sbjct: 240 EAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---------PPDVV 286

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY  ++ G C    ++ A  L  +M    +  + V Y S+I  LC     ++A R+  +M
Sbjct: 287 TYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDM 346

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  GV      F  +M   C+   +  A    D M +RG+  +  TY  L++G C  G++
Sbjct: 347 VMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGEL 406

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             AE +   ME  G   D V+Y +LI+GYCK  ++ EA  ++ +MV K + P VVTY  L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +   V  A +L  EM   G+  +  TY + I+GLCK G + +A+     +     
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D+  Y  +I  LC+S  L  A  L   +    + P +VTYN+++ G C  G+++  + 
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           L   M E    P+  T++ L+  +          E+   M  ++V+P+ +  +I++
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 170/343 (49%), Gaps = 11/343 (3%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L L+++   I+P   + N+++  L      +EA +LF E+ ++    +  ++N+++  LC
Sbjct: 213 LLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKALC 264

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
              ++ +A +L D M      P+  TY  ++ G+C + ++  A +L   M + G + + V
Sbjct: 265 TAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y  +I   C   +V +A+ +  +MV  G+      + T+  G      +  A   FDEM
Sbjct: 322 AYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEM 381

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           Q+ G+AAD  TYT  I+GLC+ G + EA  + + +     ++D   Y  LIDG CK G++
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+ +   +    + PNVVTY  +  GLC  G +  A +L  +M       ++ T++ L
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           I+G  +     +    +  M E  + PD    + ++  L +++
Sbjct: 502 INGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 244/504 (48%), Gaps = 18/504 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +F  L+    K    D   +        G+ P+L  Y+ LI+ + K G + +G   
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F + L      +   F+S I        +  A+ ++ ++   G  PNV+TY  LI GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  ++ ++     E      P+ VTYS++IDG CK G +    AL+  M     
Sbjct: 404 DGRIYEAFGMYGQILKRGME------PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PDVV Y  L+ GL        A R  ++M+ Q ++ +VV FN ++D  C+  + DEA +
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517

Query: 299 LLDLMVQRGVRPNACTYNTLM------DGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +  LM   G++P+  T+ T+M      D FC   K     +LF  M+      D    N+
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I+   K   +E+A   +  ++   ++P +VTYNT+  G   + +++ A ++F+ ++   
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +T T T  I  LCKN  +  A+ +F  +     + +   Y CL+D   KS  ++ ++
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +LF  +    + P++V+Y+I+I GLC  G++D+A ++F    +    PDV+ + +LI G+
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757

Query: 533 IRINEPSKVNELLHKMKEKKVMPD 556
            ++    +   L   M    V PD
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPD 781



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 269/537 (50%), Gaps = 23/537 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYN- 100
           ++A  IF Y  ++    P  S + +L + +  ++      H+D +L   G+ P+  + + 
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFD-KLCRGGIEPSGVSAHG 221

Query: 101 -ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            +L   FCK G V+        ++   F     + N ++KGL  + +I  A+ L + +  
Sbjct: 222 FVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLD 279

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
            G  PNV+T+ TLING C+ G    A +LF+ M     E      P+ + YST+IDG  K
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE------PDLIAYSTLIDGYFK 333

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
            G +     LF Q   + +  DVV ++S I     + D   A  ++  M+ QG+ P+VVT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           + +++  LC++ ++ EA  +   +++RG+ P+  TY++L+DGFC  G +     L+  M 
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            MG   D V Y +L++G  K   +  A+    +M+ + I+  VV +N+L  G   +++ +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513

Query: 400 HALKLFDEMQRDGVAADTRTYTTFI------DGLCKNGYIIEAVELFRTLRILKCELDIQ 453
            ALK+F  M   G+  D  T+TT +      D  CK+      ++LF  ++  K   DI 
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIA 573

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
             N +I  L K  R++ A + F +L  G + P++VTYN MI G C+  ++D+A  +F  +
Sbjct: 574 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +     P+ +T  +LIH   + N+      +   M EK   P+A     ++D   K+
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 215/467 (46%), Gaps = 48/467 (10%)

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-- 198
           L  ES    A   F   +  G +P   ++ T+ + L R G   +A  +F+EM    G+  
Sbjct: 77  LSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133

Query: 199 --IGVVCKPNTVTYST---IIDGLCKEGFVDKAKALFL---------------QMKDENI 238
             +G + +  ++       +++  C+ G VDKA  +F+               +M +  I
Sbjct: 134 NVLGSI-RDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192

Query: 239 NPD---------------------VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
             D                     V  +  ++  L    +  +A      +M++G +  +
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           V+ N ++  L  + +++ ASRLL L++  G  PN  T+ TL++GFC  G+++RA +LF  
Sbjct: 253 VSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME  G + D ++Y+ LI+GY K   +     L+ + + KG+K  VV +++      +   
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +  A  ++  M   G++ +  TYT  I GLC++G I EA  ++  +     E  I  Y+ 
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LIDG CK G L+  + L+  +      P+VV Y +++ GL   G M  A    + M   +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              +V+ F+ LI G+ R+N   +  ++   M    + PD +  + V+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 158/327 (48%), Gaps = 35/327 (10%)

Query: 67  VSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTY------NILINCFCKIGRVSL 114
           V  FN L+    +   +D  L         G+ P++ T+      +I+ + FCK  + ++
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
           G   F  + R+  + + A  N +I  L    RI +A+  F  L     EP+++TYNT+I 
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           G C       A  +FE +            PNTVT + +I  LCK   +D A  +F  M 
Sbjct: 616 GYCSLRRLDEAERIFELLKV------TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           ++   P+ VTY  L+     + D   + +LF EM ++G+ PS+V++++I+D LCK  ++D
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA+ +    +   + P+   Y  L+ G+C +G++  A  L+  M   G K DD+      
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL------ 783

Query: 355 NGYCKNKEVEEALSLY---REMVSKGI 378
                   ++ ALS Y   + ++SKG+
Sbjct: 784 --------LQRALSEYNPPKWLMSKGV 802



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N ++      +  D        L  T   PN  T  ILI+  CK   +      
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  +      PNA T+  L+        I  +  LF +++  G  P++++Y+ +I+GLC+
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A N+F +  +          P+ V Y+ +I G CK G + +A  L+  M    +
Sbjct: 725 RGRVDEATNIFHQAIDAK------LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            PD +   +L       +++N  K L    M +GV
Sbjct: 779 KPDDLLQRAL-------SEYNPPKWL----MSKGV 802


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 254/520 (48%), Gaps = 42/520 (8%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           ++++N LL +L   +H D        + A+G+  N YT  ILI+  C+  R+        
Sbjct: 203 IATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR 259

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
                 F P+  +FN+L+ G      +  A + F  +  +G  P+V +YN L++GLC  G
Sbjct: 260 ETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAG 319

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               AL    +M N   E      P+ VTY+ + +G    G +  A  +  +M    +NP
Sbjct: 320 SMEEALEFTNDMENHGVE------PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNP 373

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           D+VTY  LI G C   +  E+ +L  +M+ QG++ S+VT+ V++  LCK+ ++DEA  LL
Sbjct: 374 DLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILL 433

Query: 301 DLMVQRGVRPNACTY---------------------------NTLMDGFCLMGKINRAEE 333
             M   G++P+  TY                           + ++ G    G I+ A+ 
Sbjct: 434 HEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 493

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
            F S+       + + YNI+I+GY K   + EA+  Y++++ KGI PT+VT+N+L  G  
Sbjct: 494 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 553

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  ++  A+KL D ++  G+   + TYTT ++G C+ G +    ++   +     +    
Sbjct: 554 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            Y  ++ GLCK GRL  + +L   +    L P+ +TYN +IQ  C    + KA  L   M
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
            +++  P  +T+++LI+G          + LL  ++++ +
Sbjct: 674 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 713



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 254/518 (49%), Gaps = 27/518 (5%)

Query: 65  PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+NILL       S+ +   +   +   G+ P++ TYNIL N F  +G +S  +  
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKV 362

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R+L +   P+  T+  LI G      I E+  L  K+ + G + +++TY  L++ LC+
Sbjct: 363 VQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422

Query: 179 TGHTMIALNLFEEM------------ANGNGEIGV-----VCK----PNTVTYSTIIDGL 217
           +G    A+ L  EM            + G  E  +     +C     PN+   S II GL
Sbjct: 423 SGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 482

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
            ++G + +A+  F  +   ++  +++ YN +I G     +  EA R + +++++G+ P++
Sbjct: 483 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 542

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VTFN ++   CK  K+ EA +LLD +   G+ P + TY TLM+G+C  G ++   ++   
Sbjct: 543 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 602

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME+   K   ++Y +++ G CK   + E++ L + M ++G+ P  +TYNT+     + H 
Sbjct: 603 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHD 662

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A +L ++M +  +     TY   I+GLC  G + +A  L  TL+     L   AY  
Sbjct: 663 LQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTT 722

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I   C  G ++ A   F  +       ++  Y+ +I  LC    +  A+  F  M  + 
Sbjct: 723 IIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHG 782

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
             PD     ++++ F R  +P+ V E+   M +  ++P
Sbjct: 783 IPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 217/451 (48%), Gaps = 38/451 (8%)

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKP 205
           + +A  +  K+K    + ++ TYN+L+  L    HT I  +++ E+ A+G          
Sbjct: 184 VHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASG-------VPQ 233

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  T   +IDGLC++  +  A     +   E   P VV++N+L+ G C     + AK  F
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M+  G+ P V ++N+++  LC    M+EA    + M   GV P+  TYN L +GF ++
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G I+ A ++   M   G   D V+Y ILI G+C+   +EE+  L  +M+S+G+K ++VTY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY------------------------- 420
             L   L +  +++ A+ L  EM+  G+  D  TY                         
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSF 473

Query: 421 --TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
             +  I GL + G I EA   F ++       +I  YN +IDG  K G +  A   +  +
Sbjct: 474 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 533

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               + P +VT+N +I G C  G++ +A  L   ++ +   P  +T+  L++G+    + 
Sbjct: 534 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 593

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             + ++LH+M+ K + P     ++VV  L K
Sbjct: 594 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCK 624



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 241/582 (41%), Gaps = 96/582 (16%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +LR   +  P++S      S++  K +D   +A+   PN     ILI      G  S G 
Sbjct: 11  LLRKSLNLSPITSLGFTKHSVSAAKLHDESADAS--IPNDAVRQILI------GLRSFGA 62

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIM---------EAAALFTKLK-AFGCEPNV 166
             F  +    F   A+  N+     H   +I+          A  LF  L+  +G   + 
Sbjct: 63  SKF--LWGHHFQTLASVLNT-----HQVDQILLSLRVDNSDSALFLFDLLRNEYGFRHSR 115

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMAN--GNGEIGVVCKP----------NTVTYSTII 214
           +++  + + + R G +     +  +M    G+G    +C+           N V +  + 
Sbjct: 116 VSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLA 175

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH------------------------ 250
               +   V  A  +  +MK  N+   + TYNSL++                        
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNE 235

Query: 251 --------GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
                   GLC  +   +A     E   +   PSVV+FN +M   CK   +D A     +
Sbjct: 236 YTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCM 295

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M++ G+ P+  +YN L+ G C+ G +  A E    ME+ G + D V+YNIL NG+     
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  A  + + M+  G+ P +VTY  L  G  ++  +E + KL ++M   G+     TYT 
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAY--------------------------- 455
            +  LCK+G I EAV L   + ++  + D+  Y                           
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVC 475

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           + +I GL + G +  A   F S+    +   ++ YNIMI G    G + +A   +  + E
Sbjct: 476 SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 535

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              +P ++TF+ LI+GF +  + ++  +LL  +K   ++P +
Sbjct: 536 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 577


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 225/475 (47%), Gaps = 15/475 (3%)

Query: 58  LRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGR 111
           +R H  P  V + N +L       S    +     +   G+ P    +  L+   C+ G+
Sbjct: 29  MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGK 88

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V         + R  F+ + AT   +++ L  + R  + +  F ++   G  PNV+ Y  
Sbjct: 89  VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 148

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
            I+GLC+  +   A ++ EEM      +G   KPN  T++T+IDGLCK G+ ++A  LFL
Sbjct: 149 WIDGLCKRRYVKQAFHVLEEM------VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFL 202

Query: 232 QM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
           ++ K  +  P+V TY  +I G C       A+ L + M++QG++P+  T+  ++   CK 
Sbjct: 203 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG 262

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
              D A  L++ M Q G  PN  TYN ++DGFC  GKI  A ++     S G K D ++Y
Sbjct: 263 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 322

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            ILI  +CK   +  AL L+  MV  G  P +  Y +L     +  Q+E + K FD+   
Sbjct: 323 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 382

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G+    +TYT+ I G CK G    A+ +F  +    C  D   Y  LI GLCK  RL+ 
Sbjct: 383 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 442

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--LDMEENAAAPDVI 523
           A  L+  +    LVP  VT   +    C   +   A  +   LD  +     DV+
Sbjct: 443 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVV 497



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 223/475 (46%), Gaps = 7/475 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + + GL   + T N ++    + G        F  + R+  +P    F +L+     E +
Sbjct: 29  MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGK 88

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + E  AL   +  +G   +  T   ++  LC  G        F  M     E G    PN
Sbjct: 89  VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML----ETGT--PPN 142

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V Y+  IDGLCK  +V +A  +  +M    + P+V T+ +LI GLC       A RLF+
Sbjct: 143 VVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFL 202

Query: 267 EMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           +++     +P+V T+ V++   C+  K+  A  LL  MV++G++PN  TY TL+ G C  
Sbjct: 203 KLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKG 262

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G  +RA EL   M+  G   +  +YN +I+G+CK  +++EA  + R   S+G+K   +TY
Sbjct: 263 GSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITY 322

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L     +   + +AL LFD M  +G   D   YT+ I   C+   + E+ + F    +
Sbjct: 323 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 382

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           +      Q Y  +I G CK GR   A  +F  +       + +TY  +I GLC + ++++
Sbjct: 383 IGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEE 442

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           A+ L+  M +    P  +T   L   + R  + S    +L ++ +++ +    +V
Sbjct: 443 AKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVV 497



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 201/437 (45%), Gaps = 7/437 (1%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
             ++       R+ EAA +  ++++ G    V T N ++     TG  + A  +F+ M  
Sbjct: 7   RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 66

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                GV   P    +  ++   C+EG V++  AL   M     + D  T   ++  LC 
Sbjct: 67  A----GV--SPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 120

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
              + +    F  M++ G  P+VV +   +D LCK R + +A  +L+ MV RG++PN  T
Sbjct: 121 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 180

Query: 315 YNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           + TL+DG C +G   RA  LF  + +S   K +  +Y ++I GYC+  ++  A  L   M
Sbjct: 181 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 240

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           V +G+KP   TY TL  G  +    + A +L ++M+++G   +  TY   IDG CK G I
Sbjct: 241 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 300

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA ++ R       + D   Y  LI   CK G + +A +LF  +      P++  Y  +
Sbjct: 301 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 360

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I   C   QM++++  F         P   T+  +I G+ ++   +    +  +M +   
Sbjct: 361 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 420

Query: 554 MPDASIVSIVVDLLVKN 570
             D+     ++  L K 
Sbjct: 421 FADSITYGALISGLCKE 437



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 184/416 (44%), Gaps = 45/416 (10%)

Query: 63  SPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           +PP V ++   +  L K +      H    +   GL PN+YT+  LI+  CKIG     F
Sbjct: 139 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAF 198

Query: 117 IAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
             F ++++S  + PN  T+  +I G   E ++  A  L  ++   G +PN  TY TLI G
Sbjct: 199 RLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGG 258

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C+ G    A  L  +M    G +     PN  TY+ +IDG CK+G + +A  +      
Sbjct: 259 HCKGGSFDRAFELMNKMKQ-EGFL-----PNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 312

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + +  D +TY  LI   C       A  LF  M++ G  P +  +  ++   C+ R+M+E
Sbjct: 313 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 372

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           + +  D  +  G+ P   TY +++ G+C +G+   A  +F  M   GC  D ++Y  LI+
Sbjct: 373 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 432

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR----- 410
           G CK   +EEA +LY  M+ K + P  VT  TL        +   A+ + D + +     
Sbjct: 433 GLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVH 492

Query: 411 ---------------------------DGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
                                      +  A D  TYT FI+   +N     A E+
Sbjct: 493 TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEM 548



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 146/352 (41%), Gaps = 38/352 (10%)

Query: 39  EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGL 92
           +G   +     AF +F  +++     P V ++ +++        LA+ +    R+   GL
Sbjct: 186 DGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 245

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            PN  TY  LI   CK G     F    ++ +  F PN  T+N++I G   + +I EA  
Sbjct: 246 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 305

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG--------NGEIGVVC 203
           +     + G + + ITY  LI   C+ GH   AL+LF+ M  NG           I   C
Sbjct: 306 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYC 365

Query: 204 K--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +                    P   TY+++I G CK G    A  +F +M       D +
Sbjct: 366 QQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSI 425

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY +LI GLC  +   EAK L+  M+D+ + P  VT   +  E C+  K   A  +LD +
Sbjct: 426 TYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRL 485

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            +   R    T + ++     +G ++ A      +       D  +Y   IN
Sbjct: 486 DK---RQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFIN 534


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 253/566 (44%), Gaps = 50/566 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N +L    K   Y        R+ + G+  ++ TYN+LI+  CK  R + G++ 
Sbjct: 8   PTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLL 67

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++ +    PN  T+N+LI GL  E +I  A  +F ++      PN +TYN LI+G C 
Sbjct: 68  LKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCD 127

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            G+   AL L + M A G        +P+ V Y  ++ GL K    D AK+L  +++   
Sbjct: 128 CGNFEQALRLLDVMEAKG-------LRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           +      Y ++I GLC     +E+ +L   M   G  P ++TF+V+++  CK  K+  A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            ++  M + G+ PN   Y TL+   C  G I  A   + +M   G   D    N+LI+  
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+   V EA    R M +  + P  +T++ +  G   +     A  +FDEM + G     
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC- 476
            TY + + GLCK G + EA +L   L  +   +D   YN ++   CK G+L  A  LF  
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGE 420

Query: 477 -----------------------------------SLPHGVLVPNVVTYNIMIQGLCNDG 501
                                              +L  G L PN V Y  +  GL   G
Sbjct: 421 MVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVG 480

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           Q + A  ++ +ME     PD I  + ++ G+ R+ +  KV +L  KM+   + P  +  +
Sbjct: 481 QSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYN 540

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQG 587
           I++    K +  LK    + +  R G
Sbjct: 541 ILLHGYSKKKDLLKCSKFYNIMTRMG 566



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 262/577 (45%), Gaps = 56/577 (9%)

Query: 38  REGDINVITPNEAFCIFDYMLRMHPSPPPVSSF--NILLASL------AKNKHYDTRLNA 89
           ++GDI      EAF  +  M R   +   V  F  N+L++SL      A+ + +   ++ 
Sbjct: 267 KKGDIT-----EAFRNYATMTR---TGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMST 318

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL-------- 141
             L PN  T++ +IN +  +G     F  F  +++    P+  T+ SL+KGL        
Sbjct: 319 IDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLRE 378

Query: 142 ---------H------------------AESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
                    H                     ++ +A ALF ++  F   P+  TY  ++ 
Sbjct: 379 AKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILA 438

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GL R G  + AL LF E A   G +     PN V Y+++ DGL K G  + A  ++ +M+
Sbjct: 439 GLSRKGKMVPAL-LFFEKALARGTL----SPNKVMYTSLFDGLFKVGQSNAASYIYEEME 493

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + INPD +  N+++ G        + ++LFI+M    + PS+ T+N+++    K + + 
Sbjct: 494 HKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLL 553

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           + S+  ++M + G+ P+  T ++++ G C  G ++   ++   M       D ++ N+LI
Sbjct: 554 KCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLI 613

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
              C+  ++ +A  L       GI P V TYN +F GL     +  +  L  +M   G+ 
Sbjct: 614 TNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGIT 673

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
             +  Y + I+G+C+ G I  A  L   +  +       A + ++ GL + G+++ A  +
Sbjct: 674 PTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLV 733

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              +    L+P V T+  ++  LC   ++ +A  L   M       DV+ +++LI G   
Sbjct: 734 LDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCA 793

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             +      L  +MKE+ + P+ +    ++D +  NE
Sbjct: 794 DGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNE 830



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 202/408 (49%), Gaps = 6/408 (1%)

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++  G  P ++TYNT++N  C+ G    A +L + M +   E  V       TY+ +ID 
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVC------TYNMLIDD 54

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           LCK     K   L  +M+   I P+  TYN+LI+GL        A R+F EM+   + P+
Sbjct: 55  LCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPN 114

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            VT+N+++D  C     ++A RLLD+M  +G+RP+   Y  L+ G   + K + A+ L  
Sbjct: 115 RVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLME 174

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            +   G      +Y  +I+G CK+  ++E+L L   M   G  P ++T++ L  G  +  
Sbjct: 175 RIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAG 234

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           ++++A ++  +M + G+A +   Y T I   CK G I EA   + T+     ++D    N
Sbjct: 235 KIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICN 294

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            LI  LC++GR+  A +    +    L PN +T++ +I G    G   KA  +F +M + 
Sbjct: 295 VLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKL 354

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              P   T+  L+ G  +     +  +LL+K+       D +I + ++
Sbjct: 355 GHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTIL 402



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 237/510 (46%), Gaps = 50/510 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNIL 102
           +AF +FD M+++   P   + +  LL  L K       K    +L+      +   YN +
Sbjct: 343 KAFSMFDEMIKLGHCPSHFT-YGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTI 401

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  CK G++S     FG +++    P++ T+  ++ GL  + +++ A   F K  A G 
Sbjct: 402 LSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGT 461

Query: 163 -EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN + Y +L +GL + G +  A  ++EEM +          P+T+  + ++DG  + G
Sbjct: 462 LSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKG------INPDTIAINAVLDGYSRMG 515

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            ++K + LF++M+  ++ P + TYN L+HG     D  +  + +  M   G+ P  +T +
Sbjct: 516 KMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCH 575

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+  LCK+  +D   ++L  M+      +  T N L+   C   K+ +A +L      +
Sbjct: 576 SIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLL 635

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D  +YN +  G  +   + E+  L  +M+ +GI PT   Y +L  G+  +  ++ A
Sbjct: 636 GIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGA 695

Query: 402 LKLFDEMQRDGVAA-----------------------------------DTRTYTTFIDG 426
            +L DEM+  GV++                                      T+TT +  
Sbjct: 696 FRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHM 755

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK   + EA++L   + +   +LD+ AYN LI GLC  G    A+ L+  +    L PN
Sbjct: 756 LCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPN 815

Query: 487 VVTYNIMIQGL-CNDGQMDKARDLFLDMEE 515
             TY  +I  +  N+G++++   ++L+  E
Sbjct: 816 TTTYCTLIDAISTNEGEVEERLLVYLEQFE 845



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 153/647 (23%), Positives = 262/647 (40%), Gaps = 88/647 (13%)

Query: 22  RSNFSSLLVHFRDLTTR-EGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN 80
           R   S ++V +R  T   +G       +E+  + D M +   SP  ++ F++L+    K 
Sbjct: 175 RIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIIT-FSVLINGFCKA 233

Query: 81  ------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
                 K    ++   GL PN   Y  LI   CK G ++  F  +  + R+    +    
Sbjct: 234 GKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFIC 293

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N LI  L    R+ EA      +      PN IT++ +ING    G  + A ++F+EM  
Sbjct: 294 NVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEM-- 351

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
               I +   P+  TY +++ GLCK G + +AK L  ++       D   YN+++   C 
Sbjct: 352 ----IKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCK 407

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM--------------------- 293
               ++A  LF EM+   V P   T+ +I+  L +  KM                     
Sbjct: 408 RGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKV 467

Query: 294 ---------------DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
                          + AS + + M  +G+ P+    N ++DG+  MGK+ + E+LF  M
Sbjct: 468 MYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKM 527

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +S        +YNIL++GY K K++ +    Y  M   GI P  +T +++ LGL +   +
Sbjct: 528 QSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGML 587

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           +   K+  +M  +    D  T    I   C+   + +A +L     +L    D+  YN +
Sbjct: 588 DVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAI 647

Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME---- 514
             GL ++  L+ +  L   +    + P    Y  +I G+C  G +  A  L  +ME    
Sbjct: 648 FTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGV 707

Query: 515 ------ENAAA-------------------------PDVITFDMLIHGFIRINEPSKVNE 543
                 E+A                           P V TF  L+H   +  + S+  +
Sbjct: 708 SSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALK 767

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           L  KM    V  D    ++++  L  +     +L +F + E   E G
Sbjct: 768 LRGKMALYGVKLDVVAYNVLISGLCADG---DALAAFNLYEEMKERG 811



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 99/205 (48%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M   G  PT+VTYNT+     +  + + A  L D M+  G+ AD  TY   ID LCKN  
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
             +   L + +R      +   YN LI+GL K  ++  A  +F  +    L PN VTYNI
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I G C+ G  ++A  L   ME     PD + +  L+ G  ++ +      L+ +++   
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 553 VMPDASIVSIVVDLLVKNEISLKSL 577
           ++      + ++D L K+ +  +SL
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESL 205


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 228/472 (48%), Gaps = 9/472 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ +YNIL+   C  GRV      F  +      P+  T+  LI G  A   +  A  L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLL 317

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             + A G EPN   Y +++  LC  G    AL + E+M +    +      +   Y+T++
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVIL------DEAVYTTVL 371

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G C +G +  A+  F +M+ + +  D VTY +LI+GLC A +  EA+++  EM+ + + 
Sbjct: 372 SGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLD 431

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
              VT+ V++D  CK  KM EA ++ + MVQRGV PN  TY  L DG C  G +  A EL
Sbjct: 432 VDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANEL 491

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M + G + +  +YN LING CK   +++A+    +M + G+KP V TY TL   L +
Sbjct: 492 LHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCK 551

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             +++ A  L  EM  +G+     TY   ++G C +G +    +L   +       +   
Sbjct: 552 SGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATT 611

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+   C    +K   E++  +    + PN  TYNI+I+G C    M +A+    +M 
Sbjct: 612 YNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMI 671

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           E        ++  LI    +  +  +  +L H M+++    +  + +  +D 
Sbjct: 672 EKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDF 723



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 222/432 (51%), Gaps = 24/432 (5%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F+ + A+F+ L+  L        +A L  +++ +G  P+    N +++ L        A+
Sbjct: 203 FSSDPASFDLLLLCL-------PSAPLLRRVRQYGISPSPEACNAVLSRLPLDE----AI 251

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            LF+ + + N     VC     +Y+ ++  LC  G V+ A+ LF +M      PDVVTY 
Sbjct: 252 ELFQGLPDKN-----VC-----SYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYG 298

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LIHG C   +   A +L  +M+ +GV+P+   +  ++  LC   ++ +A  +++ MV  
Sbjct: 299 ILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHH 358

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            V  +   Y T++ GFC  G +  A   F  M+  G   D V+Y  LING C+  E++EA
Sbjct: 359 KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEA 418

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             + +EM+++ +    VTY  L  G  +  ++  A ++ + M + GVA +  TYT   DG
Sbjct: 419 EKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDG 478

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G +  A EL   +     EL+   YN LI+GLCK+G L  A      +    L P+
Sbjct: 479 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPD 538

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V TY  +I  LC  G++D+A DL  +M +N   P ++T+++L++GF          +LL 
Sbjct: 539 VYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598

Query: 547 KMKEKKVMPDAS 558
            M EK + P+A+
Sbjct: 599 WMLEKNIHPNAT 610



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 225/464 (48%), Gaps = 11/464 (2%)

Query: 67  VSSFNILLASL-AKNKHYDTR--LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           V S+NILL  L    +  D R   +     P++ TY ILI+ +C +G +         ++
Sbjct: 262 VCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGELENAVKLLDDMV 321

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                PNA  + S++  L  + R+ +A  +   +       +   Y T+++G C  G  +
Sbjct: 322 ARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLV 381

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A   F+EM             + VTY+T+I+GLC+ G + +A+ +  +M    ++ D V
Sbjct: 382 SARRWFDEMQRKG------LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEV 435

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY  L+ G C      EA ++   M+ +GV P+VVT+  + D LCK   +  A+ LL  M
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEM 495

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
             +G+  NACTYN+L++G C  G +++A      M++ G K D  +Y  LI+  CK+ E+
Sbjct: 496 SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGEL 555

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + A  L +EM+  GIKPT+VTYN L  G     +VE   KL + M    +  +  TY + 
Sbjct: 556 DRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +   C    +    E+++ +     E +   YN LI G CK+  +K A      +     
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA--AAPDVITF 525
                +Y+ +I+ L    +  +AR LF DM +    A PDV  F
Sbjct: 676 RLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 186/349 (53%), Gaps = 6/349 (1%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L   + +   +   GL  +  TY  LIN  C+ G +         +L      +  T+  
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+ G     ++ EA  +   +   G  PNV+TY  L +GLC+ G    A  L  EM+N  
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            E+      N  TY+++I+GLCK G++D+A      M    + PDV TY +LI  LC + 
Sbjct: 500 LEL------NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSG 553

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           + + A  L  EM+D G++P++VT+NV+M+  C + +++   +LL+ M+++ + PNA TYN
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +LM  +C+   +    E++  M S   + ++ +YNILI G+CK + ++EA   + EM+ K
Sbjct: 614 SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           G + T  +Y+ L   L +  +   A KLF +M+++G  A+   Y  +ID
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 232/465 (49%), Gaps = 9/465 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  ++N L+K L    R+ +A  LF ++ +    P+V+TY  LI+G C  G    A+ L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLL 317

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           ++M      +    +PN   Y++++  LC +G V  A  +   M    +  D   Y +++
Sbjct: 318 DDM------VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVL 371

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C+  D   A+R F EM  +G+    VT+  +++ LC+  ++ EA ++L  M+ R + 
Sbjct: 372 SGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLD 431

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            +  TY  L+DG+C  GK+  A ++  +M   G   + V+Y  L +G CK  +V+ A  L
Sbjct: 432 VDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANEL 491

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EM +KG++    TYN+L  GL +   ++ A++   +M   G+  D  TYTT ID LCK
Sbjct: 492 LHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCK 551

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +G +  A +L + +     +  I  YN L++G C SGR++   +L   +    + PN  T
Sbjct: 552 SGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATT 611

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YN +++  C    M    +++  M      P+  T+++LI G  +     +     ++M 
Sbjct: 612 YNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMI 671

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           EK     AS  S ++ LL K +  +++   F    ++G   E +V
Sbjct: 672 EKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDV 716



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 216/444 (48%), Gaps = 17/444 (3%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R+ +   +P+    N+++  L  +    EA  LF  L     + NV +YN L+  LC  G
Sbjct: 225 RVRQYGISPSPEACNAVLSRLPLD----EAIELFQGLP----DKNVCSYNILLKVLCGAG 276

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  LF+EMA+          P+ VTY  +I G C  G ++ A  L   M    + P
Sbjct: 277 RVEDARQLFDEMAS---------PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +   Y S++  LC     ++A  +  +M+   V      +  ++   C    +  A R  
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M ++G+  +  TY TL++G C  G++  AE++   M +     D+V+Y +L++GYCK 
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ EA  ++  MV +G+ P VVTY  L  GL +   V+ A +L  EM   G+  +  TY
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTY 507

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            + I+GLCK GY+ +A+     +     + D+  Y  LID LCKSG L  A +L   +  
Sbjct: 508 NSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLD 567

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P +VTYN+++ G C  G+++  + L   M E    P+  T++ L+  +   N    
Sbjct: 568 NGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKS 627

Query: 541 VNELLHKMKEKKVMPDASIVSIVV 564
             E+   M  + V P+ +  +I++
Sbjct: 628 TTEIYKGMCSRNVEPNENTYNILI 651



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 11/342 (3%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           L  +++   I+P     N+++  L      +EA  LF  + D+    +V ++N+++  LC
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLKVLC 273

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
              ++++A +L D M      P+  TY  L+ G+C +G++  A +L   M + G + +  
Sbjct: 274 GAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
            Y  ++   C    V +AL++  +MV   +      Y T+  G      +  A + FDEM
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           QR G+A D  TYTT I+GLC+ G + EA ++ + +   + ++D   Y  L+DG CK G++
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A+++  ++    + PNVVTY  +  GLC  G +  A +L  +M       +  T++ L
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           I+G  +     +    +  M    + PD    + ++D L K+
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 141/288 (48%), Gaps = 6/288 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ PN+ TY  L +  CK G V         +       NA T+NSLI GL     + +A
Sbjct: 464 GVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQA 523

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                 + A G +P+V TY TLI+ LC++G    A +L +EM + NG      KP  VTY
Sbjct: 524 MRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLD-NG-----IKPTIVTY 577

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +++G C  G V+  K L   M ++NI+P+  TYNSL+   C  N+      ++  M  
Sbjct: 578 NVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCS 637

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           + V+P+  T+N+++   CK R M EA    + M+++G R  A +Y+ L+       K   
Sbjct: 638 RNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVE 697

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           A +LF  M   G   +   YN  I+       +E  L+L  E+V   I
Sbjct: 698 ARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 208/396 (52%), Gaps = 6/396 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           +F  +IKG      + ++  L   L+  G  PNV+ Y TLI+G C+ G    A   F++M
Sbjct: 164 SFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKM 223

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
               GE+G+V   N  T++ +I+GL K+G       LF +MK   + P++ TYN L++  
Sbjct: 224 ----GEMGLVA--NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEY 277

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
           C       A  LF EM ++GV+ +VVT+N ++  +C+  ++ EA +L+D M +  V PN 
Sbjct: 278 CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
            TYNTL+ GFC +G +++A  L   ++S G     V+YNILI GY K    +    L RE
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE 397

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           M  +GI P+ VT   L      + ++E A +++  M++ G+  D   Y   I GLC  G 
Sbjct: 398 MEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGN 457

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           + E+ +LFR++  +  E     YN +I G CK      A  L   +    LVPNV +Y+ 
Sbjct: 458 MKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSS 517

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           +I  LC DG+ ++A  L   M E    P     +M+
Sbjct: 518 IIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 173/323 (53%), Gaps = 6/323 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++   GL  N YT+ +LIN   K G    GF  F ++  +   PN  T+N L+     E 
Sbjct: 222 KMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG 281

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +I  A  LF +++  G E NV+TYNTLI G+CR      A  L ++M            P
Sbjct: 282 KICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA------AVSP 335

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N +TY+T+I G C  G +DKA +L  Q+K   ++P +VTYN LI G   A +W     L 
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  +G+ PS VT  V++D   + ++M++A ++   M + G+ P+   Y  L+ G C+ 
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G +  + +LF SM  M  +  DV YN +I+GYCK      AL L REM +KG+ P V +Y
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASY 515

Query: 386 NTLFLGLFEIHQVEHALKLFDEM 408
           +++   L +  + E A  L D+M
Sbjct: 516 SSIIGVLCKDGKWEEAEVLLDKM 538



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 223/443 (50%), Gaps = 13/443 (2%)

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKL---KAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           A  + S+I   H +S++++ A +F      K     PN+  +N+L+  L R+       N
Sbjct: 93  ALLYESIINA-HLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRS-------N 142

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
            FE+      E+    K +  ++  +I G C+ G +DK+  L   ++D  ++P+VV Y +
Sbjct: 143 CFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTT 202

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI G C   D   A+  F +M + G+  +  TF V+++ L K     +   L + M   G
Sbjct: 203 LIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKING 262

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + PN  TYN LM+ +C  GKI RA +LF  M   G + + V+YN LI G C+ + V EA 
Sbjct: 263 LFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAE 322

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L  +M    + P ++TYNTL  G  ++  ++ A  L D+++ +G++    TY   I+G 
Sbjct: 323 KLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGY 382

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            K G      +L R +              LID   +   ++ A++++ S+    LVP+V
Sbjct: 383 SKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDV 442

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             Y ++I GLC  G M ++  LF  M E    P  + ++ +IHG+ + +   +   LL +
Sbjct: 443 YVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLRE 502

Query: 548 MKEKKVMPDASIVSIVVDLLVKN 570
           M+ K ++P+ +  S ++ +L K+
Sbjct: 503 MEAKGLVPNVASYSSIIGVLCKD 525



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 195/376 (51%), Gaps = 12/376 (3%)

Query: 67  VSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V SF I++    +N + D        L   GL PN+  Y  LI+  CK G +    + F 
Sbjct: 162 VYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFD 221

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           ++       N  TF  LI GL  +    +   LF K+K  G  PN+ TYN L+N  C  G
Sbjct: 222 KMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG 281

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A +LF+EM     E GV  + N VTY+T+I G+C+E  V +A+ L  QMK   ++P
Sbjct: 282 KICRAFDLFDEMR----ERGV--EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +++TYN+LI G C   + ++A  L  ++   G+ PS+VT+N++++   K       + L 
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  RG+ P+  T   L+D +  + ++ +A +++ SME  G   D   Y +LI+G C  
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             ++E+  L+R M    ++P+ V YNT+  G  +      AL+L  EM+  G+  +  +Y
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASY 515

Query: 421 TTFIDGLCKNGYIIEA 436
           ++ I  LCK+G   EA
Sbjct: 516 SSIIGVLCKDGKWEEA 531



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 203/434 (46%), Gaps = 21/434 (4%)

Query: 70  FNILLASLAKNKHYDTRLNATGLFPN---------LYTYNILINCFCKIGRVSLGFIAFG 120
           FN LL SL ++  ++       LF N         +Y++ I+I   C+ G +   F   G
Sbjct: 131 FNSLLGSLVRSNCFEK----AWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLG 186

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +     +PN   + +LI G      I  A   F K+   G   N  T+  LINGL + G
Sbjct: 187 LLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKG 246

Query: 181 HTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
                 +LFE+M  NG         PN  TY+ +++  C EG + +A  LF +M++  + 
Sbjct: 247 LKKDGFDLFEKMKING-------LFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVE 299

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
            +VVTYN+LI G+C      EA++L  +M    V P+++T+N ++   C    +D+AS L
Sbjct: 300 ANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSL 359

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
           LD +   G+ P+  TYN L++G+   G      +L   ME  G     V+  +LI+ Y +
Sbjct: 360 LDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVR 419

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
            +E+E+A  +Y  M   G+ P V  Y  L  GL     ++ + KLF  M    V      
Sbjct: 420 LQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVI 479

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T I G CK      A+ L R +       ++ +Y+ +I  LCK G+ + A  L   + 
Sbjct: 480 YNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMI 539

Query: 480 HGVLVPNVVTYNIM 493
              L P+    N++
Sbjct: 540 ELQLKPSASILNMI 553



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 99/226 (43%), Gaps = 22/226 (9%)

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT----- 419
           +ALSL+   + +G + T  + + L   L + H++ HA  L  ++  + +++   T     
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 420 ----------------YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
                           Y + I+   K+  + +A+  F  +           +N L+  L 
Sbjct: 80  HHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLV 139

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
           +S   + AW  F  L   V   +V ++ IMI+G C +G +DK+  L   +++   +P+V+
Sbjct: 140 RSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVV 198

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  LI G  +  +  +      KM E  ++ +    +++++ L K
Sbjct: 199 IYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFK 244


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/395 (34%), Positives = 202/395 (51%), Gaps = 36/395 (9%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFC 107
           F+ ML M P PPP   F+ +L+SL KNKHY T      +  + G+ PNL T NILINCFC
Sbjct: 81  FNRMLLMRP-PPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFC 139

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
            +  ++  F  F  IL+  + P+A T N+LIKGL     I  A     K+ A G + + +
Sbjct: 140 HLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQV 199

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMAN------------------GNGEIGVVC------ 203
           +Y TLINGLC+ G T     L  ++                     N  +G  C      
Sbjct: 200 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEM 259

Query: 204 -----KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
                 PN  TY+T+I G C  G + +A +L  +MK +NINPDV T+N LI  L      
Sbjct: 260 IVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKI 319

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA  LF EM  + + P++VT+  ++D LCKN  ++ A  L   M ++G++P+  +Y  L
Sbjct: 320 DEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 379

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +D  C  G++  A++ F  +   G   +  +YN++ING CK     + + L  +M  KG 
Sbjct: 380 LDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGC 439

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
            P  +T+ T+   LFE  + + A K   EM   G+
Sbjct: 440 MPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 205/396 (51%), Gaps = 6/396 (1%)

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
           +F R+L     P    F++++  L      +   +LF + ++ G  PN+ T N LIN  C
Sbjct: 80  SFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFC 139

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
              H   A ++F  +            P+ +T +T+I GLC  G + +A     ++  + 
Sbjct: 140 HLAHITFAFSVFANILKRGYH------PDAITLNTLIKGLCFCGEIKRALYFHDKVVAQG 193

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
              D V+Y +LI+GLC A +     RL  ++    V+P VV +  I+  LCKN+++ +A 
Sbjct: 194 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDAC 253

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L   M+ +G+ PN  TYNTL+ GFC+MG +  A  L   M+      D  ++NILI+  
Sbjct: 254 DLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 313

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K  +++EA+SL+ EM  K + P +VTY +L  GL + H +E A+ L  +M+  G+  D 
Sbjct: 314 GKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 373

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +YT  +D LCK G +  A + F+ L +    L+++ YN +I+GLCK+G      +L   
Sbjct: 374 YSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 433

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           +     +P+ +T+  +I  L    + DKA     +M
Sbjct: 434 MEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 198/399 (49%), Gaps = 6/399 (1%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A A F ++      P    ++ +++ L +  H +  ++LF++  +     GV   PN  T
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSN----GVT--PNLCT 130

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            + +I+  C    +  A ++F  +     +PD +T N+LI GLC   +   A     +++
Sbjct: 131 LNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVV 190

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            QG Q   V++  +++ LCK  +    +RLL  +    V+P+   Y T++   C   ++ 
Sbjct: 191 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVG 250

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A +L+  M   G   +  +YN LI G+C    ++EA SL  EM  K I P V T+N L 
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 310

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L +  +++ A+ LF+EM+   +  +  TYT+ IDGLCKN ++  A+ L + ++    +
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+ +Y  L+D LCK GRL+ A + F  L       NV TYN+MI GLC  G      DL
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
              ME     PD ITF  +I      +E  K  + L +M
Sbjct: 431 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 182/368 (49%), Gaps = 1/368 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P T  +  I+  L K        +LF Q +   + P++ T N LI+  CH      A  +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  ++ +G  P  +T N ++  LC   ++  A    D +V +G + +  +Y TL++G C 
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+      L   +E    K D V Y  +I+  CKNK V +A  LY EM+ KGI P V T
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YNTL  G   +  ++ A  L +EM+   +  D  T+   ID L K G I EA+ LF  ++
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                 +I  Y  LIDGLCK+  L+ A  L   +    + P+V +Y I++  LC  G+++
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIV 563
            A+  F  +       +V T++++I+G  +      V +L  KM+ K  MPDA +  +I+
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450

Query: 564 VDLLVKNE 571
             L  K+E
Sbjct: 451 CALFEKDE 458



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 153/305 (50%)

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F  M+     P    F+ I+  L KN+       L       GV PN CT N L++ FC 
Sbjct: 81  FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +  I  A  +F ++   G   D ++ N LI G C   E++ AL  + ++V++G +   V+
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y TL  GL +  + +   +L  +++   V  D   YTT I  LCKN  + +A +L+  + 
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +     ++  YN LI G C  G LK A+ L   +    + P+V T+NI+I  L  +G++D
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +A  LF +M+     P+++T+  LI G  + +   +   L  KMKE+ + PD    +I++
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380

Query: 565 DLLVK 569
           D L K
Sbjct: 381 DALCK 385


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 189/328 (57%), Gaps = 16/328 (4%)

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           G + +PN V Y+TIID +CK+   + A  L+ +M  + I PDV TYN+LI+G C      
Sbjct: 234 GKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLK 293

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +A  LF +M  + + P V TFN+++D  CK  ++ EA   L +M+++G++P+  TYN+LM
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           D +CL+ ++N+A+ +F +M   G   +  SY+I+IN +CK K V++A+ L++EM  K I 
Sbjct: 354 DRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD----TR------------TYTTF 423
           P V+TY++L  GL +  ++ +AL+L DEM   G   D    TR            TYT  
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGLCK G + +A  +F  L +    + +  Y  +I G C  G    A  L   +     
Sbjct: 474 IDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCC 533

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +PN VTY I+I+ L ++ + DKA + F+
Sbjct: 534 IPNAVTYEIIIRSLFDNDENDKAENFFV 561



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 175/315 (55%), Gaps = 16/315 (5%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           +QP++V +N I+D +CK++  ++A  L   MV + + P+  TYN L++GFC++GK+  A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            LF  M S     D  ++NIL++ +CK   V+EA +    M+ +GIKP VVTYN+L    
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
             +++V  A  +F+ M   GV A+ R+Y+  I+  CK   + +A++LF+ +   +   ++
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416

Query: 453 QAYNCLIDGLCKSGRLKFAWEL----------------FCSLPHGVLVPNVVTYNIMIQG 496
             Y+ LIDGLCKSGR+ +A EL                   L    + PN+ TY I+I G
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           LC  G+++ AR++F D+        V T+ ++IHGF       +   LL KMK+   +P+
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN 536

Query: 557 ASIVSIVVDLLVKNE 571
           A    I++  L  N+
Sbjct: 537 AVTYEIIIRSLFDND 551



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 16/326 (4%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + P++V YN++I  +C     N+A  L+ EM+ + + P V T+N +++  C   K+ +A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L + M    + P+  T+N L+D FC  G++  A+     M   G K D V+YN L++ Y
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C   EV +A S++  M  +G+   V +Y+ +     +I  V+ A+KLF EM    +  + 
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416

Query: 418 RTYTTFIDGLCKNGYIIEAVEL----------------FRTLRILKCELDIQAYNCLIDG 461
            TY++ IDGLCK+G I  A+EL                 R L+      ++  Y  LIDG
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           LCK GRL+ A  +F  L        V TY +MI G CN G  D+A  L   M++N   P+
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN 536

Query: 522 VITFDMLIHGFIRINEPSKVNELLHK 547
            +T++++I      +E  K      K
Sbjct: 537 AVTYEIIIRSLFDNDENDKAENFFVK 562



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 31/347 (8%)

Query: 65  PPVSSFNILLASLAKNK----HYD--TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N ++ S+ K+K     +D  + + +  +FP++ TYN LIN FC +G++      
Sbjct: 239 PNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGL 298

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F ++      P+  TFN L+     E R+ EA      +   G +P+V+TYN+L++  C 
Sbjct: 299 FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCL 358

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A ++F  M++     GV    N  +YS +I+  CK   VD+A  LF +M  + I
Sbjct: 359 VNEVNKAKSIFNTMSHR----GVTA--NVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQI 412

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+V+TY+SLI GLC +   + A  L  EM D+G QP ++T           R++ +   
Sbjct: 413 FPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITL---------TRQLKD--- 460

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
                  +G+RPN  TY  L+DG C  G++  A  +F  +   G      +Y ++I+G+C
Sbjct: 461 -------QGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFC 513

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
                +EA++L  +M      P  VTY  +   LF+  + + A   F
Sbjct: 514 NKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 100/204 (49%)

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           L L R +  K ++P +V YNT+   + +      A  L+ EM    +  D  TY   I+G
Sbjct: 226 LQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALING 285

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            C  G + +A+ LF  +       D+  +N L+D  CK GR+K A      +    + P+
Sbjct: 286 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD 345

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTYN ++   C   +++KA+ +F  M       +V ++ ++I+ F +I    +  +L  
Sbjct: 346 VVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFK 405

Query: 547 KMKEKKVMPDASIVSIVVDLLVKN 570
           +M  K++ P+    S ++D L K+
Sbjct: 406 EMHHKQIFPNVITYSSLIDGLCKS 429



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 104/225 (46%), Gaps = 28/225 (12%)

Query: 65  PPVSSFNILLA------SLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N L+        + K K     ++  G+  N+ +Y+I+IN FCKI  V      
Sbjct: 344 PDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKL 403

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEA----------------AALFTKLKAFGC 162
           F  +      PN  T++SLI GL    RI  A                  L  +LK  G 
Sbjct: 404 FKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGI 463

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN+ TY  LI+GLC+ G    A N+FE++      I V       TY+ +I G C +G 
Sbjct: 464 RPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVN------TYTVMIHGFCNKGL 517

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            D+A  L  +MKD    P+ VTY  +I  L   ++ ++A+  F++
Sbjct: 518 FDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562


>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 249/539 (46%), Gaps = 70/539 (12%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES-RIME 149
           G+ PN++  N LIN   K  +V++ F  F RI      PN  T+  +IK L  +   + +
Sbjct: 189 GILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQ 248

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A+ +F ++K  G  PN   Y   I GLC    + +  +L   +   N  I V        
Sbjct: 249 ASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVY------A 302

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +I G C E  +DKA  +F  M+ + + PD   Y+SLI G C  +D  +A  L+ +M+
Sbjct: 303 YTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMI 362

Query: 270 DQGVQPSVV-----------------------------------TFNVIMDELCKNRKMD 294
            +G++ + V                                    +N++ D L K  KMD
Sbjct: 363 LKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMD 422

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           E + +L+ +    +  +   Y T + G+CL GK ++A  +F  ME  G K D V+YN+L 
Sbjct: 423 EVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLA 482

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G C N+ V EA+ L   M S+G+KP   T+  +  G     ++E A   F+ M+ + V 
Sbjct: 483 AGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESV- 541

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFR-------TLRILKC--ELDIQAYNCLIDGLCKS 465
                YT  + G C+   I ++ ELF        T +   C  +L    Y+ ++  LC+ 
Sbjct: 542 ---EIYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQK 598

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G ++ A  LF         P+VVTY IMI+  C    + +A DLF DM+     PDVIT+
Sbjct: 599 GNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITY 658

Query: 526 DMLIHGFIRI---------------NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +L+ G  +                + P  V+ +   MK+++V PD  I ++++D  +K
Sbjct: 659 TVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIK 717



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 234/530 (44%), Gaps = 65/530 (12%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTP-NAATFNSLIKGLHAES 145
           +   G+ PN Y Y   I   C   +  LG+    R LR    P +   + ++I+G   E 
Sbjct: 256 MKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLL-RALRENNAPIDVYAYTAVIRGFCNEM 314

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN--------- 196
           ++ +A  +F  ++     P+   Y++LI G C+T   + AL+L+E+M             
Sbjct: 315 KLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVS 374

Query: 197 ---------GEIGVVCKP-----------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
                    GE   V              + V Y+ + D L K G +D+   +   +K  
Sbjct: 375 CILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSM 434

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           +I+ D+  Y + I G C     ++A  +F EM ++G +P VV +NV+   LC NR + EA
Sbjct: 435 HIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEA 494

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
             LL+ M  +GV+PN+ T+  +++GFC  GKI  AE  F SM+    +     Y  +++G
Sbjct: 495 MDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVE----IYTAMVSG 550

Query: 357 YCKNKEVEEALSLYREMVSKG---------IKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           YC+   +E++  L+ E+ ++G          + + V Y+ +   L +   ++ A  LFD 
Sbjct: 551 YCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDF 610

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
               G   D  TYT  I   C    + EA +LF+ ++    + D+  Y  L+DG  K  R
Sbjct: 611 FLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQAR 670

Query: 468 LKFAWELFCS-------LPHGV-----------LVPNVVTYNIMIQGLCNDGQMDKARDL 509
            K   E F S        P+ V           + P+VV Y ++I G       + A  L
Sbjct: 671 SK---EHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRL 727

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           F ++ +    PD +T+  L  G +          L ++M  K + P   I
Sbjct: 728 FNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTPPLHI 777



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 178/406 (43%), Gaps = 40/406 (9%)

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           +++ FG  PN+   N LIN L +     +A  +F+ + +    +G+   PN  TY+ II 
Sbjct: 184 QIRRFGILPNIFACNFLINRLVKCDQVNMAFEIFDRIKS----LGLC--PNHHTYAIIIK 237

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            L  +G                                   D  +A  +F EM + GV P
Sbjct: 238 ALGTKG----------------------------------GDLKQASGVFDEMKEAGVTP 263

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +   +   ++ LC N + D    LL  + +     +   Y  ++ GFC   K+++A ++F
Sbjct: 264 NSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVF 323

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             ME      D   Y+ LI GYCK  ++ +AL LY +M+ KGIK   V  + +     E+
Sbjct: 324 YDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEM 383

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            +    +  F E+++ GV  D   Y    D L K G + E   +   L+ +  + DI+ Y
Sbjct: 384 GEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHY 443

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
              I G C  G+   A+ +F  +      P+VV YN++  GLC +  + +A DL   M+ 
Sbjct: 444 TTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDS 503

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
               P+  T  ++I GF    +  +     + MK++ V    ++VS
Sbjct: 504 QGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYTAMVS 549



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 162/353 (45%), Gaps = 24/353 (6%)

Query: 226 AKALFLQMKDEN-INPDVVTYNSLIHGLCHANDWNEAKRL---FIEMM-DQGVQPSVVTF 280
           A + F ++K+++  + ++ TY ++I  LC+   WN  +RL   F +++     Q  +   
Sbjct: 80  ALSHFSELKNQHGFSHNIQTYVAIIRILCY---WNLNRRLDSLFRDIIISHSKQNPLFEI 136

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG---FCLMGKINRAEELFGS 337
           + + ++L +   + + +  L       V+  AC    + D    F  M +I R    FG 
Sbjct: 137 HDLFEKLLEGVNVKDKNHYLLRAFVGFVK--ACVGLNMFDDAIDFMFMFQIRR----FGI 190

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIH 396
           + ++       + N LIN   K  +V  A  ++  + S G+ P   TY  +   L  +  
Sbjct: 191 LPNI------FACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGG 244

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            ++ A  +FDEM+  GV  ++  Y  +I+GLC N       +L R LR     +D+ AY 
Sbjct: 245 DLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYT 304

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            +I G C   +L  A ++F  +    LVP+   Y+ +I G C    + KA DL+ DM   
Sbjct: 305 AVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILK 364

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               + +    ++H F  + E S+V +   ++K+  V  D    +IV D L K
Sbjct: 365 GIKTNCVIVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFK 417


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 240/492 (48%), Gaps = 35/492 (7%)

Query: 57  MLRMHPSPPPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNILINCFCKIG 110
           M R    PP   S+N+++A + +  +  D       +    + PN  TYN +I+   K G
Sbjct: 5   MGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG 64

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
            +  GF    +++     PNA T+N L+ GL    R+ E +AL  ++ +    P+  TY+
Sbjct: 65  DLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYS 124

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIG---------VVCK----------------- 204
            L +GL R G +   L+LF +       IG          +CK                 
Sbjct: 125 ILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA 184

Query: 205 ---PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              P  V Y+T+I+G C+ G ++ A + F QMK  +I PD +TYN+LI+GLC A     A
Sbjct: 185 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 244

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
           + L +EM D GV P+V TFN ++D   +  ++++   +L  M + G++PN  +Y ++++ 
Sbjct: 245 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 304

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           FC  GKI  A  +   M       +   YN +I+ Y ++   ++A  L  +M S GI P+
Sbjct: 305 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 364

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
           +VTYN L  GL    Q+  A ++ + +    +  D  +Y T I   C  G I +A++L +
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 424

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     +  ++ Y+ LI GL  +GRL     L+  +    +VP+   +NIM++     G
Sbjct: 425 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484

Query: 502 QMDKARDLFLDM 513
              KA DL  +M
Sbjct: 485 NEIKAEDLRKEM 496



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 10/495 (2%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA-A 152
           PN ++YN++I    + GR       F  +      PN  T+N++I G H +   +EA   
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG-HIKGGDLEAGFR 71

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++   G +PN ITYN L++GLCR G       L +EMA+          P+  TYS 
Sbjct: 72  LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK------MVPDGFTYSI 125

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           + DGL + G      +LF +     +     T + L++GLC     + A+ +   +++ G
Sbjct: 126 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 185

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+ V +N +++  C+  +++ A      M  R ++P+  TYN L++G C   +I  A+
Sbjct: 186 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 245

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +L   M+  G      ++N LI+ Y +  ++E+   +  EM   G+KP VV+Y ++    
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 305

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  ++  A+ + D+M    V  + + Y   ID   ++G   +A  L   ++       I
Sbjct: 306 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 365

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LI GLC   ++  A E+  SL +  L+P+ V+YN +I   C  G +DKA DL   
Sbjct: 366 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 425

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK--N 570
           M +      V T+  LI G       +++  L  KM +  V+P  +I +I+V+   K  N
Sbjct: 426 MHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485

Query: 571 EISLKSLPSFLVQER 585
           EI  + L   ++Q+R
Sbjct: 486 EIKAEDLRKEMLQKR 500



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 156/301 (51%)

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D    P+  ++NV++  + +  +  +A  + D M +R V PN  TYNT++DG    G + 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
               L   M   G K + ++YN+L++G C+   + E  +L  EM S+ + P   TY+ LF
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL      +  L LF +  ++GV     T +  ++GLCK+G +  A E+ ++L      
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
                YN LI+G C++G L+ A+  F  +    + P+ +TYN +I GLC   ++  A+DL
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            ++M++N   P V TF+ LI  + R  +  K   +L +M+E  + P+      +V+   K
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307

Query: 570 N 570
           N
Sbjct: 308 N 308



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 13/305 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILI 103
           AF  F  M   H  P  ++ +N L+  L K +           +   G+ P + T+N LI
Sbjct: 209 AFSTFGQMKSRHIKPDHIT-YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 267

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           + + + G++   FI    +  +   PN  ++ S++       +I EA A+   +      
Sbjct: 268 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 327

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN   YN +I+     G    A  L E+M + NG       P+ VTY+ +I GLC +  +
Sbjct: 328 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NG-----ISPSIVTYNLLIKGLCNQSQI 381

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
            +A+ +   + +  + PD V+YN+LI   C+  + ++A  L   M   G++ +V T++ +
Sbjct: 382 SEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 441

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +  L    +++E   L   M+Q  V P+   +N +++ +   G   +AE+L   M     
Sbjct: 442 ISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 501

Query: 344 KHDDV 348
            HDD 
Sbjct: 502 NHDDT 506


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 263/556 (47%), Gaps = 47/556 (8%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  +++ M+ ++   P V +++ ++  L K+            +   G+ PN   Y  L
Sbjct: 256 EARALYEEMI-INGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTL 314

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+   K G     F    +++    T +     +L+ GL   S+  EA  +F  L     
Sbjct: 315 IDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNL 374

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            PN ITY  LI+G C+ G      +L +EM   +        PN +TYS+II+G  K+G 
Sbjct: 375 IPNSITYTALIDGYCKVGDMERVESLLQEMEEKH------INPNVITYSSIINGYTKKGI 428

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A  +  +M D+NI P+   Y  LI G C A     A  L+ EM   G++ + V F+V
Sbjct: 429 LDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV 488

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK----INRAEEL---- 334
           +++ L + ++MDEA  LL  +  RG+  +   Y +LMDGF   GK    +N  EE+    
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548

Query: 335 --------------------------FGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
                                     +  M  MG   +  +YNI+I  YCK  E++ AL 
Sbjct: 549 IPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALE 608

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L+ EM S  I P+ +T NTL +GL E  ++E A+ + +EM   G+  +   +   ++   
Sbjct: 609 LWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASS 668

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K+G     +++   L  +  +++ +AYN LI   C+    K A  +   +     V + V
Sbjct: 669 KSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTV 728

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TYN +I+G C    + KA   +  M     +P+++T+++L+ G +     ++ +EL  KM
Sbjct: 729 TYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKM 788

Query: 549 KEKKVMPDASIVSIVV 564
           KE  + PDAS    ++
Sbjct: 789 KENGLNPDASTYDTLI 804



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 248/526 (47%), Gaps = 52/526 (9%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           T NIL+  FC+IG    G      ++      +   FN+LI G      +  A  L  ++
Sbjct: 114 TCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERM 173

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV--------------- 202
           +  G   ++++YNTLING C+ G    A +L  E++   G    V               
Sbjct: 174 RKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLN 233

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
            + + +TY+TII   CK+  +++A+AL+ +M      PDVVTY+S+++GLC     +EA+
Sbjct: 234 LEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQ 293

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR------------- 309
            L  EM   GV P+ V +  ++D L K     EA      +V RG+              
Sbjct: 294 ELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGL 353

Query: 310 ----------------------PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
                                 PN+ TY  L+DG+C +G + R E L   ME      + 
Sbjct: 354 FKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNV 413

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           ++Y+ +INGY K   ++EA+++ ++M+ + I P    Y  L  G  +  + E A  L++E
Sbjct: 414 ITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNE 473

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+  G+  +   +   ++ L +   + EA EL + +      LD   Y  L+DG  K+G+
Sbjct: 474 MKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGK 533

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
              A  +   +    +  +VVTYN++I GL   G+ + A+ ++  M E   AP+  T+++
Sbjct: 534 ESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNI 592

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKNEI 572
           +I  + +  E     EL ++MK  K+MP + +  ++VV L    EI
Sbjct: 593 MIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEI 638



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 239/462 (51%), Gaps = 11/462 (2%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L  +L TY  +I+ +CK   +      +  ++ + F P+  T++S++ GL  + R+ EA 
Sbjct: 234 LEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQ 293

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L  ++K  G +PN + Y TLI+ L + G        +E  A  +  +      + V  +
Sbjct: 294 ELLREMKKMGVDPNHVAYTTLIDSLFKAGSA------WEAFACQSQLVVRGMTLDLVMCT 347

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T++DGL K     +A+ +F  +   N+ P+ +TY +LI G C   D    + L  EM ++
Sbjct: 348 TLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEK 407

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            + P+V+T++ I++   K   +DEA  ++  M+ + + PNA  Y  L+DG+C  GK   A
Sbjct: 408 HINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIA 467

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L+  M+  G K ++V +++L+N   + K ++EA  L +++ S+G+    V Y +L  G
Sbjct: 468 TDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDG 527

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            F+  +   AL + +EM    +  D  TY   I+GL ++G   EA  ++  +  +    +
Sbjct: 528 FFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPN 586

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              YN +I   CK G L  A EL+  +    ++P+ +T N ++ GL   G+++KA ++  
Sbjct: 587 QATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLN 646

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +M      P+++   +L++     ++  K N +L +M E+ V
Sbjct: 647 EMSVMGIHPNLVIHRVLLNAS---SKSGKANAVL-QMHEQLV 684



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 260/555 (46%), Gaps = 64/555 (11%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRV-------------------------------- 112
           T +  + + PN+YT+N+L++ +CK+G +                                
Sbjct: 34  TEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRNVDVEVDTVTYNTVIWGFCQHGLV 93

Query: 113 --SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
             + GF++      +CF  +  T N L+KG            +   L + G   +VI +N
Sbjct: 94  NQAFGFLSIMVKKDTCF--DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFN 151

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           TLI+G C+ G   +AL+L E M       G++   + V+Y+T+I+G CK G  DKAK+L 
Sbjct: 152 TLIDGYCKAGEMSLALDLVERMRKE----GLL--SDIVSYNTLINGFCKRGEYDKAKSLL 205

Query: 231 LQM-------------------KDENIN--PDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            ++                   KD+N+N   D++TY ++I   C  +   EA+ L+ EM+
Sbjct: 206 HEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMI 265

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P VVT++ I++ LCK+ ++ EA  LL  M + GV PN   Y TL+D     G   
Sbjct: 266 INGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAW 325

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A      +   G   D V    L++G  K+ + +EA  ++R +    + P  +TY  L 
Sbjct: 326 EAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALI 385

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  ++  +E    L  EM+   +  +  TY++ I+G  K G + EA+ + + +      
Sbjct: 386 DGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNII 445

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +   Y  LIDG CK+G+ + A +L+  +    L  N V +++++  L    +MD+A +L
Sbjct: 446 PNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEEL 505

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD-LLV 568
             D+       D + +  L+ GF +  + S    ++ +M EK +  D    +++++ LL 
Sbjct: 506 LKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLE 565

Query: 569 KNEISLKSLPSFLVQ 583
             +   KS+ S +++
Sbjct: 566 HGKYEAKSVYSGMIE 580



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 235/518 (45%), Gaps = 69/518 (13%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ ++    K    D  +N         + PN Y Y ILI+ +CK G+  +    
Sbjct: 411 PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDL 470

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +  S    N   F+ L+  L    R+ EA  L   + + G   + + Y +L++G  +
Sbjct: 471 YNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFK 530

Query: 179 TGHTMIALNLFEEMA---------------NG-------------NGEIGVVCKPNTVTY 210
            G    ALN+ EEM                NG             +G I +   PN  TY
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAPNQATY 590

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I   CK+G +D A  L+ +MK   I P  +T N+L+ GL  A +  +A  +  EM  
Sbjct: 591 NIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV 650

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G+ P++V   V+++   K+ K +   ++ + +V  G++ N   YN L+  FC +    +
Sbjct: 651 MGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK 710

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  +   M   G   D V+YN LI GYC++  V++AL+ Y +M+++G+ P +VTYN L  
Sbjct: 711 ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLG 770

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL     +    +LFD+M+ +G+  D  TY T                            
Sbjct: 771 GLLGAGLMAERDELFDKMKENGLNPDASTYDT---------------------------- 802

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
                  LI G  K G  K +  L+C +     VP   TYN++I      G+MD+AR+L 
Sbjct: 803 -------LISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELL 855

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            +M+     P   T+D+LI G+  +++   ++  L K+
Sbjct: 856 NEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKI 893



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 230/500 (46%), Gaps = 69/500 (13%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             P    +N LI   +A   + +   ++T++      PNV T+N L++  C+ G+ ++AL
Sbjct: 6   IVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILAL 65

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L            V  + +TVTY+T+I G C+ G V++A      M  ++   D +T N
Sbjct: 66  DLLR---------NVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCN 116

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            L+ G C        +R+   ++  G    V+ FN ++D  CK  +M  A  L++ M + 
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKH-------------------- 345
           G+  +  +YNTL++GFC  G+ ++A+ L   + ES G K                     
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D ++Y  +I+ YCK   +EEA +LY EM+  G  P VVTY+++  GL +  ++  A +L 
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV---------------------------- 437
            EM++ GV  +   YTT ID L K G   EA                             
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS 356

Query: 438 -------ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
                  ++FR L  L    +   Y  LIDG CK G ++    L   +    + PNV+TY
Sbjct: 357 SKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITY 416

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           + +I G    G +D+A ++   M +    P+   + +LI G+ +  +     +L ++MK 
Sbjct: 417 SSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK- 475

Query: 551 KKVMPDASIVSIVVDLLVKN 570
              +    + +++ D+LV N
Sbjct: 476 ---LSGLKVNNVLFDVLVNN 492



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   +  TYN LI  +C+   V      + ++L    +PN  T+N L+ GL     + E 
Sbjct: 722 GFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAER 781

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             LF K+K  G  P+  TY+TLI+G  + G+   ++ L+ EM       G V  P T TY
Sbjct: 782 DELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQ----GFV--PKTSTY 835

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW------------ 258
           + +I    K G +D+A+ L  +M+   + P   TY+ LI G C+ +              
Sbjct: 836 NVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYR 895

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
            +AK L  EM D+G  P   T   I     +  KM +A +LL
Sbjct: 896 TDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLL 937



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 3/225 (1%)

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +  + P    +N L+  F   G +++  +++  M       +  ++N+L++ +CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +  AL L R +    ++   VTYNT+  G  +   V  A      M +     DT T   
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + G C+ G       +   L       D+  +N LIDG CK+G +  A +L   +    
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L+ ++V+YN +I G C  G+ DKA+ L  ++ E+    D + F++
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNI 222


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 246/535 (45%), Gaps = 55/535 (10%)

Query: 70  FNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N+L+  L K++     L         GL  N+ TY          G+ +   + F  + 
Sbjct: 169 YNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAELLFKEMG 219

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                 N  T++ LI        +  A     K+     E  V  YN+LING C+ G+  
Sbjct: 220 EKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNAS 279

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A   F+EM +          P  VTY+++I G C EG   KA  ++ +M  + I+P+  
Sbjct: 280 AAKYYFDEMIDKG------LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T+ ++I GLC AN   EA RLF EM ++ + PS VT+NV+++  C++  + EA  LLD M
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V +G  P+  TY  L+ G C +G+++ A+E    +     K +++ Y+ L++GYCK    
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A+S  R MV +G+   +V Y  L  G    H       L  EM   G+  D   YT  
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNM 513

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA------------ 471
           ID   K G + EA  L+  +    C  ++  Y  LI+GLCK+G +  A            
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDV 573

Query: 472 -------------------WELFCSLPHGVL---VPNVVTYNIMIQGLCNDGQMDKARDL 509
                               E    L H +L   +   V+YNI+I+G C  G++++A  L
Sbjct: 574 TPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKL 633

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              M +N   PD IT+  +I+   + +   +  +L H M +K + PD    S +V
Sbjct: 634 LHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLV 688



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 153/577 (26%), Positives = 252/577 (43%), Gaps = 102/577 (17%)

Query: 84  DTRL-NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           D+RL     L P + T + L+N   +  R +   + F  I+ +   P+   ++++++ L 
Sbjct: 83  DSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLC 142

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN--------------- 187
                 +A  +   ++   C+ +++ YN LI+GLC++     AL                
Sbjct: 143 ELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVV 202

Query: 188 -----------LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
                      LF+EM    GE G+    N +TYS +ID  C+ G +D A     +M   
Sbjct: 203 TYYGKFNEAELLFKEM----GEKGLC--ANHITYSILIDSFCRRGEMDNAIGFLDKMTKA 256

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           +I   V  YNSLI+G C   + + AK  F EM+D+G+ P+VVT+  ++   C   +  +A
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            ++ + M  +G+ PN  T+  ++ G C    +  A  LFG M+       +V+YN++I G
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
           +C++  + EA  L  EMV KG  P   TY  L  GL  + +V  A +  D++ +D    +
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLN 436

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC------------- 463
              Y+  + G CK G   +AV   R +      +D+  Y  LIDG               
Sbjct: 437 NMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLK 496

Query: 464 ----------------------KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                                 K+G LK A+ L+  +     +PNVVTY  +I GLC  G
Sbjct: 497 EMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAG 556

Query: 502 QMDKARDL------------------FLD-------MEE---------NAAAPDVITFDM 527
            MDKA  L                  FLD       ME+                +++++
Sbjct: 557 LMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNI 616

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           LI GF R+ +  +  +LLH M +  ++PD    S ++
Sbjct: 617 LIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTII 653



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 216/451 (47%), Gaps = 7/451 (1%)

Query: 74  LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           L + +  K+Y   +   GL P + TY  LI+ +C  G     F  +  +     +PN  T
Sbjct: 275 LGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYT 334

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           F ++I GL   + + EA  LF ++K     P+ +TYN +I G CR+G+   A +L +EM 
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV 394

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
            G G +     P+T TY  +I GLC  G V +AK     +  ++   + + Y++L+HG C
Sbjct: 395 -GKGFV-----PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYC 448

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
               + +A      M+++GV   +V + +++D   +         LL  M   G+RP+A 
Sbjct: 449 KEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAV 508

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            Y  ++D     G +  A  L+  M   GC  + V+Y  LING CK   +++A  L +E 
Sbjct: 509 IYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKET 568

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           +   + P  +TY      L     +E A++L   M + G  A T +Y   I G C+ G I
Sbjct: 569 LVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKI 627

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA +L   +       D   Y+ +I   CK   L+ A +L+ ++    L P+ + Y+ +
Sbjct: 628 EEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFL 687

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           + G C  G+++KA +L  +M       + +T
Sbjct: 688 VHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 184/377 (48%), Gaps = 14/377 (3%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNIL 102
           EA  +F  M      P  V+ +N+++       ++++  H    +   G  P+ YTY  L
Sbjct: 350 EAIRLFGEMKERKIMPSEVT-YNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  C +GRVS        + +     N   +++L+ G   E R  +A +    +   G 
Sbjct: 409 ISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
             +++ Y  LI+G  R   T     L +EM N         +P+ V Y+ +ID   K G 
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG------LRPDAVIYTNMIDRHSKAGN 522

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           + +A  L+  M DE   P+VVTY +LI+GLC A   ++A+ L  E +   V P+ +T+  
Sbjct: 523 LKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +D L +   M++A +L   M+ +G      +YN L+ GFC +GKI  A +L   M    
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDND 641

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D ++Y+ +I   CK   ++EA+ L+  M+ KG+KP  + Y+ L  G     ++E A 
Sbjct: 642 ILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAF 701

Query: 403 KLFDEMQRDGVAADTRT 419
           +L DEM R G+ ++  T
Sbjct: 702 ELRDEMIRRGMRSNHVT 718



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 150/298 (50%), Gaps = 9/298 (3%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M D  + P V T + +++ L + R+ ++   L D +V   V+P+   Y+ ++   C +  
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            N+A+E+   ME   CK   V YN+LI+G CK++ + EAL +   ++ KG++  VVTY  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
            F           A  LF EM   G+ A+  TY+  ID  C+ G +  A+     +    
Sbjct: 207 KF---------NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            E  +  YN LI+G CK G    A   F  +    L P VVTY  +I G CN+G+  KA 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            ++ +M     +P+  TF  +I G  R N  ++   L  +MKE+K+MP     +++++
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 203/377 (53%), Gaps = 16/377 (4%)

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           ++  +   C+      A+ L +EM N         KP+ VTY+ +I+G+CKEG +D+A  
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEGRLDEAIK 138

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
               M      P+V+T+N ++  +C    W +A++L  +M+ +G  PSVVTFN++++ LC
Sbjct: 139 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 198

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +   +  A  +L+ M   G  PN+ +YN L+ GFC   K++RA E    M S GC  D V
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 258

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN L+   CK+ +V+ A+ +  ++ SKG  P ++TYNT+  GL ++ + E A+KL DEM
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 318

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +R G+  D  TY++ + GL + G + EA++ F  L  L    +   YN ++ GLCKS + 
Sbjct: 319 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM----------EENAA 518
             A +    +      P   TY I+I+G+  +G   +A DL  ++           E  A
Sbjct: 379 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVA 438

Query: 519 APDVITFDMLIHGFIRI 535
           AP ++ F      F+RI
Sbjct: 439 APVLLFFFAPFFSFVRI 455



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 193/359 (53%)

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           +S  +   CKE  V +A  L  +M+++   PDVVTYN LI+G+C     +EA +    M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G QP+V+T N+I+  +C   +  +A +LL  M+++G  P+  T+N L++  C  G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA ++   M   GC  + +SYN L++G+CK K+++ A+     MVS+G  P +VTYNTL 
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
             L +  +V+ A+++ +++   G +    TY T IDGL K G    A++L   +R    +
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            DI  Y+ L+ GL + G++  A + F  L    + PN +TYN ++ GLC   Q D+A D 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
              M      P   T+ +LI G        +  +LL+++  + ++  +S   +   +L+
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAAPVLL 443



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 183/359 (50%), Gaps = 8/359 (2%)

Query: 87  LNATGLFP--NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +N   LFP  +L  ++  +   CK   V         +      P+  T+N LI G+  E
Sbjct: 71  INQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 130

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
            R+ EA      + ++GC+PNVIT+N ++  +C TG  M A  L  +M          C 
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG------CS 184

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ VT++ +I+ LC++G + +A  +  +M      P+ ++YN L+HG C     + A   
Sbjct: 185 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 244

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M+ +G  P +VT+N ++  LCK+ K+D A  +L+ +  +G  P   TYNT++DG   
Sbjct: 245 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 304

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           +GK  RA +L   M   G K D ++Y+ L++G  +  +V+EA+  + ++   GI+P  +T
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           YN++ LGL +  Q + A+     M          TYT  I+G+   G   EA++L   L
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 142/282 (50%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           S+  F+  +   CK   + +A +LLD M  +G +P+  TYN L++G C  G+++ A +  
Sbjct: 81  SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
            +M S GC+ + +++NI++   C      +A  L  +M+ KG  P+VVT+N L   L   
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
             +  A+ + ++M   G   ++ +Y   + G CK   +  A+E    +    C  DI  Y
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N L+  LCK G++  A E+   L      P ++TYN +I GL   G+ ++A  L  +M  
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
               PD+IT+  L+ G  R  +  +  +  H ++   + P+A
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 362



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 12/220 (5%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVS 113
           MH   P   S+N LL    K K  D  +       + G +P++ TYN L+   CK G+V 
Sbjct: 215 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 274

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
           +      ++     +P   T+N++I GL    +   A  L  +++  G +P++ITY++L+
Sbjct: 275 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 334

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +GL R G    A+  F ++       G+  +PN +TY++I+ GLCK    D+A      M
Sbjct: 335 SGLSREGKVDEAIKFFHDLE------GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 388

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
             +   P   TY  LI G+ +     EA  L  E+  +G+
Sbjct: 389 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 56/121 (46%)

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             +  ++  +   CK   +  A +L   + +    P+VVTYN++I G+C +G++D+A   
Sbjct: 80  FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +M      P+VIT ++++             +LL  M  K   P     +I+++ L +
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199

Query: 570 N 570
            
Sbjct: 200 Q 200


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 226/444 (50%), Gaps = 19/444 (4%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F R+L+   TP    FN ++  L           L  K++  G +PN++  N LIN  C+
Sbjct: 50  FNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQ 109

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD--- 235
            GH   A ++  ++      + +  KPNT+T +T+I GLC  G +     +  ++KD   
Sbjct: 110 LGHIPSAFSVLTKI------LKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163

Query: 236 -------ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
                  ENINPDV T+  L+ G C      EAK +   MM QG++P VVT+N +MD   
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
             +++++A  + + M Q GV P+  +Y+ L++GFC +  ++ A EL   M       + V
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +Y+ LI+G CK+ ++  AL L  EM  +G  P +VTY+++   L + HQV++A+ L  +M
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           +  G+  +  TYT  I GLC++G + +A ++F  L +    L++  Y  +I G C  G  
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVITFDM 527
             A  L   +     +PN  TY I+I  L    + + A  L  +M E N      +T D+
Sbjct: 404 DEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDL 463

Query: 528 LIHGFIRINEPSKVNELLHKMKEK 551
           +   ++  + P   N LL K + K
Sbjct: 464 IASIWVTGSSPG--NSLLCKKQGK 485



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/406 (33%), Positives = 207/406 (50%), Gaps = 46/406 (11%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           ++A  +F+ +L+ +P+PP +  FN +L SL K+KHY T      ++   G+ PNL   NI
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI----------MEAA 151
           LIN FC++G +   F    +IL+  + PN  T N+LIKGL    +I           +A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV--------- 202
            LF K+      P+V T+  L++G C+ G    A N+   M     + GVV         
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 203 --------------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
                                 P+  +YS +I+G CK   +D+A  L  +M  + I P+V
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTY+SLI GLC +   + A +L  EM D+G  P++VT++ I+D LCKN ++D A  LL  
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M  +G++PN  TY  L+ G C  GK+  A ++F  +   G   +  +Y ++I G+C    
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
            +EAL+L  +M   G  P   TY  + L LF+  + E A KL  EM
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 48/419 (11%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD A +LF ++  +N  P  + +N ++  L  +  ++    L  +M  +G++P++V  N+
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR----------AE 332
           +++  C+   +  A  +L  +++ G +PN  T NTL+ G CL GKI+           A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           +LF  M       D  ++ IL++G+CK   V+EA ++   M+ +GIKP VVTYN+L  G 
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           F + QV  A  +F+ M + GV+ D ++Y+  I+G CK   + EA+EL + +   +   ++
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282

Query: 453 QAYNCLIDGLCKSGRLKFAWEL-----------------------------------FCS 477
             Y+ LIDGLCKSG++ +A +L                                      
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           + +  + PN+ TY I+I+GLC  G+++ AR +F D+       +V T+ ++I GF     
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK---NEISLKSLPSFLVQERQGEVGESN 593
             +   LL KM++   +P+A    I++  L K   NE++ K L   +     G V  +N
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTN 461



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 179/361 (49%), Gaps = 23/361 (6%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN-KHYDTRL------NATGLF-------- 93
            AF +   +L+M   P  ++  N L+  L  N K +D         +A  LF        
Sbjct: 115 SAFSVLTKILKMGYKPNTIT-LNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENI 173

Query: 94  -PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P++YT+ IL++ FCK GRV         ++     P   T+NSL+ G     ++ +A +
Sbjct: 174 NPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKS 233

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +F  +   G  P++ +Y+ LING C+      A+ L +EM +          PN VTYS+
Sbjct: 234 IFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ------IIPNVVTYSS 287

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +IDGLCK G +  A  L  +M D    P++VTY+S++  LC  +  + A  L  +M +QG
Sbjct: 288 LIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQG 347

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           +QP++ T+ +++  LC++ K+++A ++ + ++ +G   N  TY  ++ GFC  G  + A 
Sbjct: 348 IQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEAL 407

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   ME  GC  +  +Y I+I    K  E E A  L  EM+       V   N L   +
Sbjct: 408 TLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASI 467

Query: 393 F 393
           +
Sbjct: 468 W 468



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 175/364 (48%), Gaps = 10/364 (2%)

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           L + GFV  +K         N + + + Y S      + ND ++A  LF  ++ Q   P 
Sbjct: 2   LLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPP 61

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
            + FN I+  L K++       L   M  RG++PN    N L++ FC +G I  A  +  
Sbjct: 62  NIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLT 121

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEV----------EEALSLYREMVSKGIKPTVVTYN 386
            +  MG K + ++ N LI G C N ++          ++A+ L+ +M+ + I P V T+ 
Sbjct: 122 KILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFT 181

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G  +  +V+ A  +   M   G+     TY + +DG      + +A  +F T+  L
Sbjct: 182 ILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL 241

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               DIQ+Y+ LI+G CK   +  A EL   + H  ++PNVVTY+ +I GLC  G++  A
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA 301

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M +    P+++T+  ++    + ++      LL +MK + + P+    +I++  
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361

Query: 567 LVKN 570
           L ++
Sbjct: 362 LCQS 365


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 235/492 (47%), Gaps = 25/492 (5%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G  P + T+  LIN +CK  R+         ++ S    +   +  LI  L  + R+ 
Sbjct: 381 ARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLK 440

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA     ++ A G  PNV+ Y ++I+G C+ G    AL +F+ M +        C PN  
Sbjct: 441 EAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG------CHPNAW 494

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY ++I GL ++  + KA AL  +M+++ I P V+ Y +LI G C  ++++ A RLF  M
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMM 554

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
              G+ P    +NV+ D LCK+ + +EA   L   V++GV     TY +L+DGF   G  
Sbjct: 555 EKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNT 611

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  L   M + GCK D  +Y++L+   CK K++ EALS+  +M   G+K  +V Y  +
Sbjct: 612 DFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTII 671

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              + +  + +HA  LF+EM   G      TYT FI   CK G I EA  L   +     
Sbjct: 672 ISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGV 731

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ------------- 495
             D+  Y+  I+G    G +  A+     +      PN  TY ++++             
Sbjct: 732 TPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYI 791

Query: 496 ---GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
              G+ N  +++    L   M ++   P V+T+  +I GF +     +   LL  M  K 
Sbjct: 792 DTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKA 851

Query: 553 VMPDASIVSIVV 564
           + P+  I ++++
Sbjct: 852 ISPNEEIYTMLI 863



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/583 (27%), Positives = 257/583 (44%), Gaps = 109/583 (18%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVS-------------------------LGFIAF 119
           + L   GL P+  TYN +I  +CK G ++                         LG+   
Sbjct: 168 SHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRT 227

Query: 120 GRILRSCF----------TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
             + ++C+            N  ++  LI+GL+    + EA  L   +   GC  N+  Y
Sbjct: 228 SDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMY 287

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
             LI GLC+ G    A  L +EM       GVV  P+  TY+ +IDG CK G +  A  +
Sbjct: 288 TLLIKGLCKEGRIHDARGLLDEMPLR----GVV--PSVWTYNAMIDGYCKSGRMKDALGI 341

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
              M+    NPD  TYNSLI+GLC     +EA+ L    + +G  P+V+TF  +++  CK
Sbjct: 342 KALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCK 400

Query: 290 NRKMDEASRL----------LDL-------------------------MVQRGVRPNACT 314
             ++D+A R+          LDL                         M   G+ PN   
Sbjct: 401 AERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVI 460

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           Y +++DG+C +G +  A E+F  ME  GC  +  +Y  LI G  ++K++ +A++L  +M 
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
             GI P V+ Y TL  G  + H+ ++A +LF+ M+++G+  D + Y    D LCK+G   
Sbjct: 521 EDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAE 580

Query: 435 EAVEL---------------------------FRTLRILK-----CELDIQAYNCLIDGL 462
           EA                              F  + I K     C+ D+  Y+ L+  L
Sbjct: 581 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK  +L  A  +   +    +  N+V Y I+I  +  +G+ D A+ LF +M  +   P  
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSA 700

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            T+ + I  + +I +  +   L+ +M+   V PD     I ++
Sbjct: 701 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN 743



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 235/481 (48%), Gaps = 14/481 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           G+ P+++TYN +I+ +CK GR+  +LG  A   + ++   P+  T+NSLI GL    ++ 
Sbjct: 314 GVVPSVWTYNAMIDGYCKSGRMKDALGIKAL--MEQNGCNPDDWTYNSLIYGL-CGGKLD 370

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EA  L     A G  P VIT+  LING C+      AL +   M + N      CK +  
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN------CKLDLQ 424

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y  +I+ L K+  + +AK    +M    + P+VV Y S+I G C       A  +F  M
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLM 484

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G  P+  T+  ++  L +++K+ +A  L+  M + G+ P    Y TL+ G C   + 
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEF 544

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A  LF  ME  G   D+ +YN+L +  CK+   EEA S    +V KG+  T VTY +L
Sbjct: 545 DNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSL 601

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G  +    + A  L ++M  +G  AD  TY+  +  LCK   + EA+ +   + +   
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + +I AY  +I  + K G+   A  LF  +      P+  TY + I   C  GQ+++A  
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEH 721

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           L  +ME +   PDV+T+ + I+G   +    +    L +M +    P+     +++   +
Sbjct: 722 LIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFL 781

Query: 569 K 569
           K
Sbjct: 782 K 782



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 240/544 (44%), Gaps = 49/544 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A GL PN+  Y  +I+ +CK+G V      F  +      PNA T+ SLI GL  + ++ 
Sbjct: 451 ANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG--------NGEI 199
           +A AL TK++  G  P VI Y TLI G C+      A  LFE M  NG        N   
Sbjct: 511 KAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLT 570

Query: 200 GVVCKP-----------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             +CK                    VTY++++DG  K G  D A  L  +M +E    D+
Sbjct: 571 DALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ L+  LC     NEA  +  +M   GV+ ++V + +I+ E+ K  K D A  L + 
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+  G +P+A TY   +  +C +G+I  AE L G ME  G   D V+Y+I ING      
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGY 750

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTL---FL-------------GLFEIHQVEHALKLFD 406
           ++ A S  + MV    +P   TY  L   FL             G++   ++    +L +
Sbjct: 751 MDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLE 810

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M + G+     TY++ I G CK   + EA  L   +       + + Y  LI   C   
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIK 870

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                      +      P + +Y+ +I GLC++G  D+A+ LF D+       + + + 
Sbjct: 871 LFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWK 930

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
           +L  G ++       ++LL  M  +    D+   S++ D       S++     +V E +
Sbjct: 931 ILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTD-------SIREASGSVVSELR 983

Query: 587 GEVG 590
           GE  
Sbjct: 984 GEAA 987



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 210/437 (48%), Gaps = 10/437 (2%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L++ L   G  P+ +TYNT+I   C+ G   IA   F  +     ++      +T T + 
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQM------DTYTCNA 219

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++ G C+   + KA  L + M       +  +Y  LI GL  A    EA  L   M+  G
Sbjct: 220 LLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDG 279

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
              ++  + +++  LCK  ++ +A  LLD M  RGV P+  TYN ++DG+C  G++  A 
Sbjct: 280 CSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDAL 339

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   ME  GC  DD +YN LI G C  K ++EA  L    +++G  PTV+T+  L  G 
Sbjct: 340 GIKALMEQNGCNPDDWTYNSLIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGY 398

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +++ AL++   M       D + Y   I+ L K   + EA E    +       ++
Sbjct: 399 CKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV 458

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             Y  +IDG CK G +  A E+F  + H    PN  TY  +I GL  D ++ KA  L   
Sbjct: 459 VIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M+E+   P VI +  LI G  + +E      L   M++  + PD    +++ D L K+  
Sbjct: 519 MQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGR 578

Query: 573 SLKSLPSFLVQERQGEV 589
           + ++  SFLV  R+G V
Sbjct: 579 AEEAY-SFLV--RKGVV 592



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 155/325 (47%), Gaps = 1/325 (0%)

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           +L+  ++ +G+ P  VT+N ++   CK   +  A R   L+ + G++ +  T N L+ G+
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C    + +A  L   M  MGC+ ++ SY ILI G  + + V EAL L   MV  G    +
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
             Y  L  GL +  ++  A  L DEM   GV     TY   IDG CK+G + +A+ +   
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +    C  D   YN LI GLC  G+L  A EL          P V+T+  +I G C   +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D A  +  +M  +    D+  + +LI+  I+     +  E L++M    + P+  I + 
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463

Query: 563 VVDLLVKNEISLKSLPSFLVQERQG 587
           ++D   K  +   +L  F + E +G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEG 488



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 136/291 (46%), Gaps = 1/291 (0%)

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +N+ +  L +    +   +L   +VQ G+ P+  TYNT++  +C  G +  A   F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
             G + D  + N L+ GYC+  ++ +A  L   M   G +    +Y  L  GL+E   V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL L   M +DG + +   YT  I GLCK G I +A  L   + +      +  YN +I
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DG CKSGR+K A  +   +      P+  TYN +I GLC  G++D+A +L          
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFT 385

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           P VITF  LI+G+ +         +   M       D     +++++L+K 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 90/205 (43%)

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +E  +A+   R +  K +  +   YN     L      E+  KL+  + ++G+  DT TY
Sbjct: 123 REAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTY 182

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T I   CK G +  A   F  LR    ++D    N L+ G C++  L+ A  L   +P 
Sbjct: 183 NTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPL 242

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
                N  +Y I+IQGL     + +A  L   M ++  + ++  + +LI G  +      
Sbjct: 243 MGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHD 302

Query: 541 VNELLHKMKEKKVMPDASIVSIVVD 565
              LL +M  + V+P     + ++D
Sbjct: 303 ARGLLDEMPLRGVVPSVWTYNAMID 327


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 172/628 (27%), Positives = 286/628 (45%), Gaps = 109/628 (17%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNIL 102
           A  +FD M + +   P + S N LL++L K          YD ++    + P+++T  I+
Sbjct: 15  ALHVFDNMGK-YGRKPSLRSCNSLLSNLVKRGESYSAVLVYD-QMRRLDIVPDVFTCAIM 72

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL------------------------- 137
           +N +CK G+V         + +  F  NA ++NSL                         
Sbjct: 73  VNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGV 132

Query: 138 ----------IKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIAL 186
                     IKG   + ++ EA  +  ++ K  G   +   Y  LI+G C+ G    A+
Sbjct: 133 MRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAI 192

Query: 187 NLFEEM--------------------ANGN---GEIGVVC------KPNTVTYSTIIDGL 217
            + +EM                     NG    GE  ++C      KP++ +Y T++DG 
Sbjct: 193 RVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGY 252

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           C++G   KA  +  QM  + I P VVTYN+L+ GLC   D+ +A RL+  M+ +GV P+ 
Sbjct: 253 CRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNE 312

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           V +  ++D L K      A  L D ++ RG+  +   +NT+++G C MG+++ A+E F  
Sbjct: 313 VGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKR 372

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME +GCK D ++Y  L +GYCK   VEEA  +  +M  + I P++  YN+L +GLF   +
Sbjct: 373 MEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKK 432

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE------------------- 438
           +   + L  EM   G++ +  TY   I G C  G + +A                     
Sbjct: 433 ISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSK 492

Query: 439 ----LFRTLRILKCELDIQA---------YNCLIDGLCKSGRLKFAWELFCSLPHGVL-- 483
               L+R  RI +  + +Q          + CL D      R    W++  +L    +  
Sbjct: 493 IVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKF 552

Query: 484 -VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
            +PN V YNI + GLC  G+++ AR  FL +   +  PD  T+  LIHGF      ++  
Sbjct: 553 SLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAF 612

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            L  +M  K ++P+ +  + +++ L K+
Sbjct: 613 NLRDEMVNKGLVPNITTYNALLNGLCKS 640



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 246/516 (47%), Gaps = 41/516 (7%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            GL  NL+  N LIN +CK G+V  G      + +    P++ ++ +L+ G   +    +
Sbjct: 201 VGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSK 260

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +  ++   G EP V+TYNTL+ GLCR G    AL L+  M     + GV   PN V 
Sbjct: 261 AFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLML----QRGVT--PNEVG 314

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y T++DGL K G   +A  L+  +    IN  +  +N++I+GLC   + + AK  F  M 
Sbjct: 315 YCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRME 374

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           + G +P  +T+  + D  CK   ++EA ++ + M +  + P+   YN+L+ G     KI+
Sbjct: 375 ELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKIS 434

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +  +L   M++ G   + V+Y  LI G+C    +++A S Y EM+ KG  P V+  + + 
Sbjct: 435 KLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIV 494

Query: 390 LGLFEIHQVEHALKLFDEMQ-----------RDGVAADTR-------------------- 418
             L+ + +++ A  L  +M             D   AD R                    
Sbjct: 495 SSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSL 554

Query: 419 ----TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
                Y   + GLCK+G + +A   F  L       D   Y  LI G   +G +  A+ L
Sbjct: 555 PNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNL 614

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              + +  LVPN+ TYN ++ GLC  G +D+AR LF  +      P+V+T+++LI G+ +
Sbjct: 615 RDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCK 674

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              P +  +L  KM ++ + P     S +++   K 
Sbjct: 675 SGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQ 710



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 234/484 (48%), Gaps = 24/484 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P + TYN L+   C+ G        +  +L+   TPN   + +L+ GL        A
Sbjct: 272 GIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRA 331

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L+  + A G   ++  +NT+INGLC+ G    A   F+ M     E+G  CKP+ +TY
Sbjct: 332 LTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRME----ELG--CKPDGITY 385

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            T+ DG CK G V++A  +  +M+ E I P +  YNSLI GL  +   ++   L  EM  
Sbjct: 386 RTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDT 445

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G+ P+VVT+  ++   C   ++D+A      M+ +G  PN    + ++     +G+I+ 
Sbjct: 446 RGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDE 505

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYC----KNKEVE--EALSLYREMVSKGIK---PT 381
           A  L   M         V ++++++  C    +N ++   +   +   +    IK   P 
Sbjct: 506 ANMLLQKM---------VDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPN 556

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            V YN    GL +  +V  A + F  +       D  TY T I G    GY+ EA  L  
Sbjct: 557 NVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRD 616

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +       +I  YN L++GLCKSG L  A  LF  L    L+PNVVTYNI+I G C  G
Sbjct: 617 EMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSG 676

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
              +A DL   M +   +P +IT+  LI+GF + ++  +  +LL++MK   V    +  S
Sbjct: 677 SPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFS 736

Query: 562 IVVD 565
            +V+
Sbjct: 737 KLVE 740



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 225/457 (49%), Gaps = 7/457 (1%)

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           +++  + + G V      F  + +    P+  + NSL+  L        A  ++ +++  
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
              P+V T   ++N  C+ G    A+    EM     E+      N V+Y++++DG    
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFEL------NAVSYNSLVDGYVSL 114

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGVQPSVVT 279
           G ++ AK +   M ++ +  + VT   LI G C      EA+++  EM  + GV      
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           +  ++D  CK  KM +A R+ D M++ G++ N    N+L++G+C  G+++  E L   M 
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMR 234

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            +  K D  SY  L++GYC++    +A ++  +M+ KGI+PTVVTYNTL  GL      +
Sbjct: 235 KLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYK 294

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            AL+L+  M + GV  +   Y T +DGL K G    A+ L+  +        I A+N +I
Sbjct: 295 DALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMI 354

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           +GLCK G +  A E F  +      P+ +TY  +  G C  G +++A  +   ME+    
Sbjct: 355 NGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIF 414

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           P +  ++ LI G     + SK+ +LL +M  + + P+
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPN 451



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 196/420 (46%), Gaps = 47/420 (11%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           + +FN ++  L K    D       R+   G  P+  TY  L + +CK+G V   F    
Sbjct: 347 IYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKE 406

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           ++ +    P+   +NSLI GL    +I +   L  ++   G  PNV+TY  LI G C  G
Sbjct: 407 KMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQG 466

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD----- 235
               A + + EM      IG    PN +  S I+  L + G +D+A  L  +M D     
Sbjct: 467 RLDKAFSAYFEM------IGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVL 520

Query: 236 --------ENIN----------------------PDVVTYNSLIHGLCHANDWNEAKRLF 265
                   +N +                      P+ V YN  + GLC +   N+A+R F
Sbjct: 521 DHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFF 580

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           + +      P   T+  ++        ++EA  L D MV +G+ PN  TYN L++G C  
Sbjct: 581 LGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKS 640

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G ++RA  LF  +   G   + V+YNILI+GYCK+    EAL L  +M+ +GI P+++TY
Sbjct: 641 GYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITY 700

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L  G  +   VE A+KL +EM+   V     T++  ++G  ++G + +  +L   + +
Sbjct: 701 SSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHM 760



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 170/351 (48%), Gaps = 12/351 (3%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P +  +N L+  L  +K           ++  GL PN+ TY  LI  +C  GR+   F A
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  ++   F PN    + ++  L+   RI EA  L  K+  F    +        N   R
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIR 534

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                   +  +E A           PN V Y+  + GLCK G V+ A+  FL +   + 
Sbjct: 535 KLDCWKIADTLDESAIK------FSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSF 588

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD  TY +LIHG   A   NEA  L  EM+++G+ P++ T+N +++ LCK+  +D A R
Sbjct: 589 TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARR 648

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L D +  +G+ PN  TYN L+DG+C  G    A +L G M   G     ++Y+ LING+C
Sbjct: 649 LFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFC 708

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           K  +VEEA+ L  EM +  +  T+ T++ L  G  +   V+   KL + M 
Sbjct: 709 KQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMH 759



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 34/282 (12%)

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  + D M + G +P+  + N+L+      G+   A  ++  M  +    D  +  I++N
Sbjct: 15  ALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVN 74

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            YCK  +VE A+   REM   G +   V+YN+L  G   +  +E A  +   M   GV  
Sbjct: 75  AYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMR 134

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T T  I G CK   + EA ++ R +                                
Sbjct: 135 NKVTLTLLIKGYCKQCKVEEAEKVLREME------------------------------- 163

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
                GV+V     Y  +I G C  G+M  A  +  +M +     ++   + LI+G+ + 
Sbjct: 164 --KEDGVVVDEY-AYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKN 220

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            +  +   LL  M++  + PD+     +VD   ++ +S K+ 
Sbjct: 221 GQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAF 262



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 35/171 (20%)

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           E   V++AL +FD M + G     R+  + +  L K G    AV ++  +R     LDI 
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMR----RLDI- 62

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
                                         VP+V T  IM+   C  G++++A +   +M
Sbjct: 63  ------------------------------VPDVFTCAIMVNAYCKAGKVERAVEFVREM 92

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           E+     + ++++ L+ G++ + +      +L  M EK VM +   +++++
Sbjct: 93  EKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLI 143


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 180/327 (55%), Gaps = 2/327 (0%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           + DV++Y+  I+GLC      EA  +F EM ++G  P   T+N++++ LCK+ +++    
Sbjct: 88  DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L+D M  RG  P   TY TL+ GFC  G+++ A ++   ME  G   + V+Y  LI G C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207

Query: 359 KNKEVEEALSLYREMVSKGIK--PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
              EVE A+ + +EM  +G +  P VVTY  L  GL +    E  ++  DEM   G   +
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             TYT  I GLC+ G  +EA  L   +  + CELD+  YN LIDGLCK G L FA E+  
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            +    + P+V TY  +IQGLC+ G +D+A  L  +M      P+ +T+  LI+GF + +
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387

Query: 537 EPSKVNELLHKMKEKKVMPDASIVSIV 563
                 +L+++MK   +MP   I  I+
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/335 (34%), Positives = 177/335 (52%), Gaps = 8/335 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++ +Y+  IN  CK G+++     F  +      P++ T+N LI GL  ++++    +L 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            +++A G  P V+TY TLI+G C  G    A+++ +EM +     G+   PNTVTY+ +I
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHR----GIT--PNTVTYTALI 203

Query: 215 DGLCKEGFVDKAKALFLQMK--DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            GLC  G V++A  +  +MK       P+VVTY  LIHGLC    +        EM+  G
Sbjct: 204 QGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG 263

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P+  T+  ++  LC+     EA+ LL+ MV  G   +   YN+L+DG C MG+++ A 
Sbjct: 264 CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAR 323

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           E+   M   G   D  +Y  LI G C    ++EAL L +EM +KGI P  VTY TL  G 
Sbjct: 324 EMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGF 383

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            +  + +HAL+L +EM+ +G+      Y      L
Sbjct: 384 TQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 155/303 (51%), Gaps = 4/303 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+ +TYNILIN  CK  ++ +G      +    F+P   T+ +LI G     R+  A
Sbjct: 121 GSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAA 180

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  +++  G  PN +TY  LI GLC  G    A+ + +EM     E    C PN VTY
Sbjct: 181 MDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNE----CCPNVVTY 236

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I GLC++G  +       +M      P+  TY +LIHGLC    + EA  L  EM+ 
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            G +  VV +N ++D LCK  ++D A  +  LMV++GV P+  TY +L+ G C  G ++ 
Sbjct: 297 IGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDE 356

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  L   M + G   + V+Y  LING+ +    + AL L  EM S G+ P    Y  LF 
Sbjct: 357 ALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFK 416

Query: 391 GLF 393
            L+
Sbjct: 417 SLY 419



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 8/337 (2%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + +VI+Y+  INGLC+ G    A+ +F EM            P++ TY+ +I+GLCK+  
Sbjct: 88  DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGS------APDSFTYNILINGLCKDAQ 141

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++   +L  +M+    +P VVTY +LIHG C A   + A  +  EM  +G+ P+ VT+  
Sbjct: 142 LEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTA 201

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVR--PNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           ++  LC   +++ A  +L  M  RG    PN  TY  L+ G C  G      E    M  
Sbjct: 202 LIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMII 261

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC  ++ +Y  LI+G C+     EA  L  EMV+ G +  VV YN+L  GL ++ +++ 
Sbjct: 262 SGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDF 321

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A ++   M   GVA D  TYT+ I GLC  G + EA+ L + +R      +   Y  LI+
Sbjct: 322 AREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN 381

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           G  ++ R   A +L   +    L+P    Y I+ + L
Sbjct: 382 GFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 155/313 (49%), Gaps = 15/313 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  IF  M     S P   ++NIL+  L K+   +        + A G  P + TY  L
Sbjct: 109 EAMEIFREM-EEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTL 167

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG- 161
           I+ FC  GRV         +     TPN  T+ +LI+GL     +  A  +  ++K  G 
Sbjct: 168 IHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGN 227

Query: 162 -CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
            C PNV+TY  LI+GLC+ G   + +   +EM      I   C PN  TY+ +I GLC++
Sbjct: 228 ECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEM------IISGCFPNNATYTALIHGLCQK 281

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G   +A  L  +M       DVV YNSLI GLC   + + A+ + I M+++GV P V T+
Sbjct: 282 GSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTY 341

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++  LC    +DEA  L+  M  +G+ PN+ TY TL++GF    + + A +L   M+S
Sbjct: 342 TSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKS 401

Query: 341 MGCKHDDVSYNIL 353
            G       Y IL
Sbjct: 402 NGLMPAGDIYKIL 414



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 37/289 (12%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y+  ++G C  G+I  A E+F  ME  G   D  +YNILING CK+ ++E  +SL  EM
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            ++G  PTVVTY TL  G     +V+ A+ + DEM+  G+  +T TYT  I GLC  G +
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212

Query: 434 IEAVELFRTLRIL--KCELDIQAYNCLIDGLCKSGRLKFAWEL---------------FC 476
             A+ + + +++   +C  ++  Y  LI GLC+ G  +   E                + 
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272

Query: 477 SLPHGVLVP--------------------NVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
           +L HG+                       +VV YN +I GLC  G++D AR++ + M E 
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK 332

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             APDV T+  LI G        +   L+ +M+ K ++P++   + +++
Sbjct: 333 GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN 381



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 2/176 (1%)

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + + +  +L +YR  +       V++Y+    GL +  Q+  A+++F EM+  G A D+ 
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I+GLCK+  +   V L   ++       +  Y  LI G C +GR+  A ++   +
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME--ENAAAPDVITFDMLIHGF 532
            H  + PN VTY  +IQGLC+ G++++A  +  +M+   N   P+V+T+  LIHG 
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGL 243



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%)

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +  +L+++     +    D  +Y+  I+GLCK G I EA+E+FR +       D   YN 
Sbjct: 72  IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LI+GLCK  +L+    L   +      P VVTY  +I G C  G++D A D+  +ME   
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
             P+ +T+  LI G     E  +   +L +MK
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMK 223



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 71/135 (52%)

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
           I  ++ ++R   +   + D+ +Y+  I+GLCK G++  A E+F  +      P+  TYNI
Sbjct: 72  IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +I GLC D Q++    L  +M+    +P V+T+  LIHGF          ++L +M+ + 
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191

Query: 553 VMPDASIVSIVVDLL 567
           + P+    + ++  L
Sbjct: 192 ITPNTVTYTALIQGL 206


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 255/538 (47%), Gaps = 47/538 (8%)

Query: 68  SSFNILLASLAKNK-HYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           S  + L+ +  K++ H++     +++   G+ PN    +IL     + G     +  FG 
Sbjct: 188 SVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGD 247

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++R    PN  TFN LI     +       AL   +  F CEP+V +YN +IN  C  G 
Sbjct: 248 VVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQ 307

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           +  AL+L   M   NG     CKP+  T+ TIID  CKEG V+ A+  F +++D  ++ +
Sbjct: 308 SSYALHLLNLMIE-NG-----CKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQN 361

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN-------------------- 281
            + YN +I G   A D ++A  LF EM  + + P  +TFN                    
Sbjct: 362 TIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLR 421

Query: 282 ---------------VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
                          V +  LC   + DEA +LL+ ++++G+ P+   +N+++  +   G
Sbjct: 422 DLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAG 481

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              RA   +G M   G      + + L+    +   ++EA     +M+ KG   T + + 
Sbjct: 482 LEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFT 541

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G F I  V  A  L++EM+  GV  D   +  FI+GLC +G + +A ++F  +   
Sbjct: 542 VLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRK 601

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               +   YN LI G CK G+L  A +L   +    L+P++ T N++I GLC  G+M  A
Sbjct: 602 GFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLA 661

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            + F+DM     +PD++T++ LI G+ +  +    ++L+ KM +    PD +  +I +
Sbjct: 662 IETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRI 719



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 206/460 (44%), Gaps = 6/460 (1%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           TPN +  + L + L           LF  +   G  PN  T+N LI   CR G T I   
Sbjct: 219 TPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEA 278

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L   M          C+P+  +Y+ +I+  C +G    A  L   M +    P + T+ +
Sbjct: 279 LLHVMGKFR------CEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCT 332

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I   C   +   A++ F E+ D G+  + + +N+++    K R + +A+ L + M  + 
Sbjct: 333 IIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKD 392

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + P+  T+NTL+ G    GK      L   +   G  HD    ++ + G C     +EA+
Sbjct: 393 IVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAM 452

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   ++ KGI P+VV +N++          E A   +  M + G+   + T ++ +  L
Sbjct: 453 KLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISL 512

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            + G + EA      +      +   A+  L+DG  + G +  A  L+  +    + P+ 
Sbjct: 513 VRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDA 572

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V +   I GLC  G M  A D+F DM      P+   ++ LI GF ++ + ++  +L+ +
Sbjct: 573 VAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVRE 632

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           M ++ ++PD   V++++  L K      ++ +F+   R G
Sbjct: 633 MNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 8/428 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           E +    +TL+    ++     AL +  +M     E+GV   PN    S +   L + G 
Sbjct: 184 ESDFSVLDTLMQAFVKSEMHFEALEILSKMR----EVGVT--PNPSAISILFRLLIRAGD 237

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFN 281
                 LF  +  +   P+  T+N LI   C    W       + +M +   +P V ++N
Sbjct: 238 CGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKG-WTRIGEALLHVMGKFRCEPDVYSYN 296

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++++  C   +   A  LL+LM++ G +P+  T+ T++D FC  G +  A + F  +E M
Sbjct: 297 IVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDM 356

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   + + YNI+I+GY K +++ +A  L+ EM +K I P  +T+NTL  G +   + E  
Sbjct: 357 GLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDG 416

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L  ++   G+  D+      + GLC  G   EA++L   L        + A+N +I  
Sbjct: 417 NRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAA 476

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
              +G  + A+  +  +    L P+  T + ++  L   G +D+A     DM +      
Sbjct: 477 YGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVT 536

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            + F +L+ G+ RI   +    L ++MK + V PDA   +  ++ L  + +   +   F 
Sbjct: 537 NMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFS 596

Query: 582 VQERQGEV 589
              R+G V
Sbjct: 597 DMLRKGFV 604



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 95/227 (41%), Gaps = 37/227 (16%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNIL 102
           +A+ +F  MLR    P     +N L+    K    +  L      N  GL P+++T N++
Sbjct: 590 DAYDVFSDMLRKGFVPNNFV-YNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMI 648

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   CK GR+ L    F  + R   +P+  T+N+LI G      +  A  L  K+   G 
Sbjct: 649 ICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGW 708

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEM---------ANGNGEIGVVCK--------- 204
           EP++ TYN  I+G C       A+ + EE+            N  I  VC          
Sbjct: 709 EPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNVILDHAMIL 768

Query: 205 ----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                     PNTVT + ++   CK+G  +  KA+F   K   I+ D
Sbjct: 769 TAKLLKMAFVPNTVTVNVLLSQFCKQGMPE--KAIFWGQKLSEIHLD 813


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 252/494 (51%), Gaps = 15/494 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++YT N+L+    K  +V   ++ F  +L     P+ +TFN LI  L  E ++ +A
Sbjct: 128 GFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKA 187

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  K++  G  P+V+TYNT++N  C+ G    AL L ++M    G  G+  + +  TY
Sbjct: 188 GYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQM----GSKGI--EADACTY 241

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++D LCK     K   L  +M+   I+P+ +TYNS+I+G         A R+F EM  
Sbjct: 242 NMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSM 301

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
             + P+ VT+N ++D  C +   ++A  +L++M   G +PN  +Y+ L++G C   K   
Sbjct: 302 LNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFEL 361

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           ++ +   M   G     ++Y  +I+G C+N  + E++ L  +M+  G+ P VVT++ L  
Sbjct: 362 SKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLIN 421

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           G   + ++++  ++  +M + G+A ++  YTT I   CK G ++EA +++  +  +  + 
Sbjct: 422 GFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDA 481

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +    N L+  LCK G++  A   F  +     VPN +T++ +I G  N G   KA  +F
Sbjct: 482 NCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMF 541

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            +M +    P   T+  L+    R  +  +   LL K+     +P A      VD +  N
Sbjct: 542 DEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL---HYIPSA------VDTVTYN 592

Query: 571 EISLKSLPSFLVQE 584
            I +++  S ++ +
Sbjct: 593 TILVETFKSGMLTD 606



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 261/561 (46%), Gaps = 53/561 (9%)

Query: 34  DLTTREGDINVITPNEAFCIFDYMLR-MHPSP--PPVSSFNILLASLAKNKHYDT----- 85
           D++T    INV+          Y+L+ M  S   P V ++N +L    K   Y       
Sbjct: 167 DVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELI 226

Query: 86  -RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
            ++ + G+  +  TYN+L++  CK  R + G++   ++ +   +PN  T+NS+I G   E
Sbjct: 227 DQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKE 286

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVC 203
            +I  A  +F ++      PN +TYN LI+G C  G+   AL + E M A G        
Sbjct: 287 GKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP------- 339

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           KPN V+YS +++GLC+    + +K++  +M+   +    + Y ++I GLC     NE+ +
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  +M+  GV P VVTF+V+++  C+  K+     ++  M + G+ PN+  Y TL+  +C
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459

Query: 324 LM-----------------------------------GKINRAEELFGSMESMGCKHDDV 348
                                                GK+  AE  F  M  +G   + +
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +++ +INGY  +    +A S++ EM+  G  P+  TY  L   L    + + A +L D++
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
                A DT TY T +    K+G + +AV LF  +       D   Y  +  GL + G++
Sbjct: 580 HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKM 639

Query: 469 KFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
             A   + + L  G + P  V Y   + GL   GQ   A     DME+N    D+I  ++
Sbjct: 640 VAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNV 699

Query: 528 LIHGFIRINEPSKVNELLHKM 548
           +++G+ R+ + +K  ++   M
Sbjct: 700 ILNGYSRMGKMAKAGDIFTMM 720



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 229/476 (48%), Gaps = 12/476 (2%)

Query: 65  PPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P VS+FNIL+        L K  +   ++  +G  P++ TYN ++N +CK GR       
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALEL 225

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++       +A T+N L+  L   +R  +   L  K++     PN ITYN++ING  +
Sbjct: 226 IDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVK 285

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +F+EM+  N        PN VTY+ +IDG C +G  ++A  +   M+    
Sbjct: 286 EGKIGAATRIFQEMSMLN------LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+ V+Y++L++GLC    +  +K +   M   G+    + +  ++D LC+N  ++E+ +
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LLD M++ GV P+  T++ L++GFC +GKI   +E+   M   G   + + Y  LI  YC
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +V EA  +Y  M   G        N L   L +  +V  A   F  M + G   ++ 
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           T+   I+G   +G  ++A  +F  +           Y  L+  LC++G+ K A  L   L
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
            +     + VTYN ++      G +  A  LF +M +    PD  T+ ++  G IR
Sbjct: 580 HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIR 635



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 213/438 (48%), Gaps = 41/438 (9%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N + F+ LI+    E  + +A   F  +   G  P+V T N L+  L +          F
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           +EM         VC P+  T++ +I+ LC EG + KA  L  +M++    P VVTYN+++
Sbjct: 157 KEMLARR-----VC-PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVL 210

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           +  C    +  A  L  +M  +G++    T+N+++D+LCKN +  +   LL  M +R + 
Sbjct: 211 NWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS 270

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  TYN++++GF   GKI  A  +F  M  +    + V+YN LI+G+C +   E+AL++
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
              M + G KP  V+Y+ L  GL    + E +  + + M+ +G+      YT  IDGLC+
Sbjct: 331 LEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCR 390

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           NG + E+V+L   +       D+  ++ LI+G C+ G++K   E+ C +    L PN + 
Sbjct: 391 NGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSII 450

Query: 490 Y-----------------------------------NIMIQGLCNDGQMDKARDLFLDME 514
           Y                                   N+++  LC DG++  A   F  M 
Sbjct: 451 YTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMS 510

Query: 515 ENAAAPDVITFDMLIHGF 532
           +    P+ ITFD +I+G+
Sbjct: 511 KIGNVPNSITFDCIINGY 528



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 192/386 (49%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +CK N   +  +I    +EG V  A   F  M     NP V T N L+  L         
Sbjct: 93  LCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAV 152

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
              F EM+ + V P V TFN++++ LC   K+ +A  LL  M + G  P+  TYNT+++ 
Sbjct: 153 WLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNW 212

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           +C  G+   A EL   M S G + D  +YN+L++  CKN    +   L ++M  + I P 
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPN 272

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            +TYN++  G  +  ++  A ++F EM    +  +  TY   IDG C +G   +A+ +  
Sbjct: 273 EITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILE 332

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
            +     + +  +Y+ L++GLC+  + + +  +   +    ++   + Y  MI GLC +G
Sbjct: 333 MMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNG 392

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            ++++  L   M ++   PDV+TF +LI+GF R+ +   V E++ KM +  + P++ I +
Sbjct: 393 LLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYT 452

Query: 562 IVVDLLVKNEISLKSLPSFLVQERQG 587
            ++    K    +++   ++   R G
Sbjct: 453 TLIYNYCKTGDVVEAFKVYVAMSRIG 478



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 254/556 (45%), Gaps = 43/556 (7%)

Query: 71   NILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
            N+L++SL K+      +++   ++  G  PN  T++ +IN +   G     F  F  +++
Sbjct: 487  NVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIK 546

Query: 125  SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
            +   P+  T+  L+K L    +  EA  L  KL       + +TYNT++    ++G    
Sbjct: 547  AGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTD 606

Query: 185  ALNLFEEMANGN------------------GEI-------------GVVCKPNTVTYSTI 213
            A+ LF+EM   N                  G++             G V  P  V Y+T 
Sbjct: 607  AVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAV-SPEKVMYTTF 665

Query: 214  IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
            +DGL + G    A      M+   +  D++  N +++G        +A  +F  MM  G+
Sbjct: 666  VDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIF-TMMWSGI 724

Query: 274  --QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
               PS+ T+N+++    K + + + S L ++M++ G+ P+  T ++L+ GFC    ++  
Sbjct: 725  TISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVG 784

Query: 332  EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             +L   M   G   D  ++N+LI  YC+  EV +A  L   M    I P + T++++   
Sbjct: 785  LKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISV 844

Query: 392  LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            L  +  V+ +  L  EM   G   D R Y   ++ +C+ G+I  A +L   +  L     
Sbjct: 845  LSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSG 904

Query: 452  IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
              A + L+ GL K G+++ A  +   +    L+P + T+  ++   C +  + +A  L  
Sbjct: 905  DVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKD 964

Query: 512  DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
             M+      DVI +++LI G     + +   +L  ++K++ + P+ +   I++D +  N+
Sbjct: 965  TMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTND 1024

Query: 572  ISLKSLPSFL--VQER 585
            ISL      L  +QER
Sbjct: 1025 ISLAKGEVLLKDLQER 1040



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/567 (23%), Positives = 250/567 (44%), Gaps = 38/567 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILL------ASLAKNKHYDTRLNATGLFPNLYTYNI 101
           NE+  + D ML+     P V +F++L+        +   K    ++   GL PN   Y  
Sbjct: 395 NESVKLLDKMLK-DGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT 453

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  +CK G V   F  +  + R  +  N    N L+  L  + ++  A   F  +   G
Sbjct: 454 LIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIG 513

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---------GEIGVVCKP------- 205
             PN IT++ +ING   +G+ + A ++F+EM             G +  +C+        
Sbjct: 514 NVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAK 573

Query: 206 -------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                        +TVTY+TI+    K G +  A ALF +M   N+ PD  TY  +  GL
Sbjct: 574 RLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGL 633

Query: 253 CHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
                   A   +  ++ +G V P  V +   +D L +  +   A    + M + G+  +
Sbjct: 634 IRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCAD 693

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               N +++G+  MGK+ +A ++F  M S +       +YNIL++GY K K + +  +LY
Sbjct: 694 LIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLY 753

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             M+  GI P  +T ++L LG  +   ++  LKL  +M  DGVA D  T+   I   C+ 
Sbjct: 754 NIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCET 813

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             + +A +L   + +     D+  ++ +I  L +   ++ +  L   +     +P+   Y
Sbjct: 814 DEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQY 873

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
             ++  +C  G +  A  L  +ME    +   +    L+ G  +  +  +   +L  M  
Sbjct: 874 IALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLR 933

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSL 577
           K ++P  +  + ++ +  +NE  +++L
Sbjct: 934 KSLIPTIATFTTLMHMFCRNESLVEAL 960



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 17/204 (8%)

Query: 24   NFSSLLVHFRDLTTREGDINVI----TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
            N  +L   F D+TT +  I+V+    T  E+  +   ML      P    +  L+  + +
Sbjct: 824  NIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLE-RGCIPDRRQYIALVNRMCR 882

Query: 80   NKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
              H          + A G+       + L+    K G+V    +    +LR    P  AT
Sbjct: 883  MGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIAT 942

Query: 134  FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
            F +L+        ++EA  L   +     + +VI YN LI+GLC  G    AL L++E+ 
Sbjct: 943  FTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIK 1002

Query: 194  NGNGEIGVVCKPNTVTYSTIIDGL 217
                       PN  TY  +ID +
Sbjct: 1003 QRG------LWPNMTTYCILIDAI 1020


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/446 (32%), Positives = 231/446 (51%), Gaps = 17/446 (3%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           SC T +A T   L+  L  + +  EA A+F  L   G +P +ITY TL+  L R      
Sbjct: 18  SCQTVHART--KLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKS 75

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
              L  ++A+ NG      KP+++  + +I+   + G VD+A  +F +MK+    P   T
Sbjct: 76  IPALLSKVAD-NG-----MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTST 129

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMM--DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           YN+LI G   A    E+ +L +EMM  D+ V+P+  T+N+++   C  +K++EA  +L  
Sbjct: 130 YNTLIKGFGIAGRPYESMKL-LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHK 188

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV  G++P+  TYNT+   +   G+  RAE L   M     K ++ +  I+I+GYCK   
Sbjct: 189 MVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGN 248

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLF---EIHQVEHALKLFDEMQRDGVAADTRT 419
           + EAL     M   G+ P  V +N+L  G     + + V+ AL L +E    G+  D  T
Sbjct: 249 MPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEF---GIKPDVVT 305

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           ++T ++     G +    E+F  +     E DI AY+ L  G  ++G+ + A  L  S+ 
Sbjct: 306 FSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMS 365

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              + PNVV +  +I G C  G+MD+A  L   M E   +P++ T++ LI G+    +P 
Sbjct: 366 KYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPW 425

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVD 565
           K  ELL  M+E+ V+P+ S + +V D
Sbjct: 426 KAEELLTTMEERGVVPEMSTMQLVAD 451



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 225/489 (46%), Gaps = 16/489 (3%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N     G+       F  +      P   T+ +L+  L  + R     AL +K+   G
Sbjct: 28  LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+ I  N +IN    +G    A+ +F++M     E G  CKP T TY+T+I G    G
Sbjct: 88  MKPDSILLNAMINAFSESGKVDEAMKIFQKMK----EYG--CKPTTSTYNTLIKGFGIAG 141

Query: 222 F-VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              +  K L +  +DEN+ P+  TYN LI   C      EA  +  +M+  G+QP VVT+
Sbjct: 142 RPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTY 201

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N +     +N + + A RL+  M    V+PN  T   ++ G+C  G +  A      M+ 
Sbjct: 202 NTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKE 261

Query: 341 MGCKHDDVSYNILINGYCKNKE---VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +G   + V +N LI GY    +   V+EAL+L  E    GIKP VVT++T+         
Sbjct: 262 LGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGL 318

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +E+  ++F++M + G+  D   Y+    G  + G   +A  L  ++     + ++  +  
Sbjct: 319 MENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTT 378

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I G C +G++  A+ L   +      PN+ TY  +I G     Q  KA +L   MEE  
Sbjct: 379 IISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERG 438

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP---DASIVSIVVDLLVKNEISL 574
             P++ T  ++   +  I    + N +L+  +E+  +    D+  + +     +  +  L
Sbjct: 439 VVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDSDKIQVQSLESIYKKQKL 498

Query: 575 KSLPSFLVQ 583
            + PS L+Q
Sbjct: 499 SASPSNLLQ 507



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 191/431 (44%), Gaps = 5/431 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L   G  P L TY  L+    +  R         ++  +   P++   N++I       +
Sbjct: 48  LTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGK 107

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  +F K+K +GC+P   TYNTLI G    G    ++ L E M           KPN
Sbjct: 108 VDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDEN-----VKPN 162

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ +I   C +  +++A  +  +M    I PDVVTYN++        +   A+RL +
Sbjct: 163 DRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLIL 222

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M    V+P+  T  +I+   CK   M EA R L  M + GV PN   +N+L+ G+    
Sbjct: 223 KMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTT 282

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
             N  +E    ME  G K D V+++ ++N +     +E    ++ +MV  GI+P +  Y+
Sbjct: 283 DTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYS 342

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G     Q   A  L   M + GV  +   +TT I G C  G +  A  L   +  +
Sbjct: 343 ILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEM 402

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               +++ Y  LI G  ++ +   A EL  ++    +VP + T  ++       G   +A
Sbjct: 403 GTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEA 462

Query: 507 RDLFLDMEENA 517
             +    EE +
Sbjct: 463 NRILNGSEEES 473



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 25/335 (7%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYN 100
           P E+  + + M +     P   ++NIL+ +    K  +   N      A+G+ P++ TYN
Sbjct: 143 PYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYN 202

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +   + + G          ++  +   PN  T   +I G   E  + EA     ++K  
Sbjct: 203 TMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKEL 262

Query: 161 GCEPNVITYNTLINGLCRTGHTM---IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           G +PN + +N+LI G   T  T     AL L EE            KP+ VT+STI++  
Sbjct: 263 GVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFG---------IKPDVVTFSTIMNAW 313

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
              G ++  + +F  M    I PD+  Y+ L  G   A    +A+ L   M   GVQP+V
Sbjct: 314 SSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNV 373

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           V F  I+   C   KMD A RL + M + G  PN  TY TL+ G+    +  +AEEL  +
Sbjct: 374 VIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTT 433

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
           ME  G   +  +  ++ + +        A+ L++E
Sbjct: 434 MEERGVVPEMSTMQLVADAW-------RAIGLFKE 461



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 31/247 (12%)

Query: 43  NVITPNEAFC---------------IFDYMLRMHP---SPPPVSSFNILLASLAKNKHYD 84
           N++ PNE  C                  ++ RM      P PV  FN L+         +
Sbjct: 227 NIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVV-FNSLIKGYLDTTDTN 285

Query: 85  ------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
                 T +   G+ P++ T++ ++N +   G +      F  ++++   P+   ++ L 
Sbjct: 286 GVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILA 345

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
           KG     +  +A AL T +  +G +PNV+ + T+I+G C  G    A  L E+M     E
Sbjct: 346 KGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMH----E 401

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
           +G    PN  TY T+I G  +     KA+ L   M++  + P++ T   +         +
Sbjct: 402 MGT--SPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLF 459

Query: 259 NEAKRLF 265
            EA R+ 
Sbjct: 460 KEANRIL 466


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 255/533 (47%), Gaps = 56/533 (10%)

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +F +++  LA +   D+      ++   G   +   +  +I+ + ++G        F RI
Sbjct: 77  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 136

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P+   +N ++  L  E+RI     ++  +K  G EPNV TYN L+  LC+    
Sbjct: 137 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 196

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  L  EM+N        C PN V+Y+T+I  +C+ G V + + L      E   P V
Sbjct: 197 DGAKKLLVEMSNKG------CCPNAVSYTTVISSMCEVGMVKEGRQL-----AERFEPVV 245

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             YN+LI+GLC   D+     L  EM+++G+ P+V++++ +++EL  + +++ A  LL  
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305

Query: 303 MVQRG------------------------------------VRPNACTYNTLMDGFCLMG 326
           M++RG                                    ++PN   YNTL+ GFC  G
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHG 365

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            I++A  +F  ME +GC  +  +Y  LING+ K   +E A+ ++ +M++ G  P VV Y 
Sbjct: 366 NIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYT 425

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RI 445
           ++   L    + + A  L + M ++  A    T+  FI GLC  G +  A ++FR + + 
Sbjct: 426 SMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 485

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            +C  +I  YN L+DGL K+ R++ A+ L   +    +  +  TYN ++ G CN G    
Sbjct: 486 YRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGI 545

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK--EKKVMPD 556
           A  L   M  N  +PD IT +M+I  + +  +  +  ++L  +    +K  PD
Sbjct: 546 ALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPD 598



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 213/440 (48%), Gaps = 44/440 (10%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N+LL +L KN   D        ++  G  PN  +Y  +I+  C++G V  G   
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG--- 234

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             R L   F P  + +N+LI GL  E        L +++   G  PNVI+Y+TLIN L  
Sbjct: 235 --RQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSN 292

Query: 179 TGHTMIALNLFEEMAN-----------------------------GNGEI-GVVCKPNTV 208
           +G   +A +L  +M                                N  I G   +PN V
Sbjct: 293 SGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVV 352

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+T++ G C  G +DKA ++FL M++   +P++ TY SLI+G         A  ++ +M
Sbjct: 353 AYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G  P+VV +  +++ LC++ K  EA  L+++M +    P+  T+N  + G C  G++
Sbjct: 413 LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472

Query: 329 NRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + AE++F  ME    C  + V+YN L++G  K   +EEA  L RE+  +G++ +  TYNT
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNT 532

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI-- 445
           L  G         AL+L  +M  +G + D  T    I   CK G    AV++   +    
Sbjct: 533 LLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGR 592

Query: 446 LKCELDIQAYNCLIDGLCKS 465
            K   D+ +Y  +I GLC+S
Sbjct: 593 RKWRPDVISYTNVIWGLCRS 612



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 206/470 (43%), Gaps = 56/470 (11%)

Query: 128 TPNAATF--NSLIKGLHAESRIMEAAALFTKL---KAFGCEPNVITYNTLINGLCRTGHT 182
           +PN A    ++++K L  ES +  A   F  +     F   P  +T+  +I  L   G  
Sbjct: 34  SPNHAEIKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQV 91

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
                L ++M       G  C  +   + ++I    + G  ++A  +F ++K+   +P V
Sbjct: 92  DSVQYLLQQMKLQ----GFHCSEDL--FISVISVYRQVGLAERAVEMFYRIKEFGCDPSV 145

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             YN ++  L   N       ++ +M   G +P+V T+NV++  LCKN K+D A +LL  
Sbjct: 146 KIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE 205

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS-YNILINGYCKNK 361
           M  +G  PNA +Y T++   C +G +    +L    E +      VS YN LING CK +
Sbjct: 206 MSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPV------VSVYNALINGLCKER 259

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT-- 419
           + +  + L  EMV KGI P V++Y+TL   L    Q+E A  L  +M + G   +  T  
Sbjct: 260 DYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLS 319

Query: 420 ----------------------------------YTTFIDGLCKNGYIIEAVELFRTLRI 445
                                             Y T + G C +G I +AV +F  +  
Sbjct: 320 SLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEE 379

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
           + C  +I+ Y  LI+G  K G L+ A  ++  +      PNVV Y  M++ LC   +  +
Sbjct: 380 IGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKE 439

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           A  L   M +   AP V TF+  I G           ++  +M+++   P
Sbjct: 440 AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCP 489



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/226 (19%), Positives = 103/226 (45%), Gaps = 6/226 (2%)

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-KPTVVTYNTLFLGLFEIHQVEHALK 403
           H ++  + ++    +   V  AL  ++ + +  + K T +T+  +   L    QV+    
Sbjct: 37  HAEIKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQY 96

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           L  +M+  G       + + I    + G    AVE+F  ++   C+  ++ YN ++D L 
Sbjct: 97  LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 156

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
              R++  + ++  +      PNV TYN++++ LC + ++D A+ L ++M      P+ +
Sbjct: 157 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAV 216

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++  +I     +    +  +L  + +     P  S+ + +++ L K
Sbjct: 217 SYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCK 257



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 10/149 (6%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCF 106
           +F  M + +  PP + ++N LL  LAK    +     T      G+  +  TYN L++  
Sbjct: 478 VFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGS 537

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG---CE 163
           C  G   +     G+++ +  +P+  T N +I     + +  E A     L + G     
Sbjct: 538 CNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGK-AERAVQMLDLVSCGRRKWR 596

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEM 192
           P+VI+Y  +I GLCR+      + LFE M
Sbjct: 597 PDVISYTNVIWGLCRSNCREDGVILFERM 625


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 257/515 (49%), Gaps = 17/515 (3%)

Query: 60  MHPSPPPVS-SFNILLASLAKNKHY---DTRLNATGLF---PNLYTYNILINCFCKIGRV 112
           +H  P P + +FN ++    +  H    ++ L     F   P++Y YNILIN +C  G+ 
Sbjct: 141 IHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQT 200

Query: 113 --SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
             +LG++ F  ++ +  TP+  TF ++I     +  +MEA  LF  +K  G  PNV+ YN
Sbjct: 201 FDALGWMRF--MIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYN 258

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           TL+NG  +      A  L+EEM +          P+  T++ ++ G  + G  +    L 
Sbjct: 259 TLMNGYVKARDIGQANMLYEEMKSK------AVAPDCTTFNILVAGHYRYGREEDRDRLL 312

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             +           YN  + GLC A   +EA +   +M+++G+ P+VV FN I+    + 
Sbjct: 313 RDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRA 372

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
              ++A +   +MV+ G+ P++ T ++L+ G   + ++  A +L   M   G   +  ++
Sbjct: 373 GLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAF 432

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
            +L++GY +  +V  A SL+ EM  +GI P  V ++    GL  +  V+ A  +F +M +
Sbjct: 433 TLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSK 492

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G   +   Y + I G C +G + EA+ L R +       DI   N +I+GLCK GR+K 
Sbjct: 493 KGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKS 552

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A ++F ++ H  L+P++VTYN +I G C         ++   M      PD+ T+++ +H
Sbjct: 553 ASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLH 612

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           G     + S+   +L ++    V+PD    + V++
Sbjct: 613 GLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMN 647



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 230/480 (47%), Gaps = 6/480 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   GL P+     IL     +IG     +     ++     P    FN++I G   + 
Sbjct: 104 RMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKG 163

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            +    +L   ++ F C+P+V  YN LIN  C  G T  AL     M + NG     C P
Sbjct: 164 HVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMID-NG-----CTP 217

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + VT+ T+I+  C +G + +A+ LF  MK+    P+VV YN+L++G   A D  +A  L+
Sbjct: 218 SLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLY 277

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM  + V P   TFN+++    +  + ++  RLL  + Q G    +  YN  + G C  
Sbjct: 278 EEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWA 337

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G ++ A +    M   G     V++N +I  Y +    E+A   YR MV  G+ P+ +T 
Sbjct: 338 GWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTC 397

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           ++L +GL ++ +++ A  L  EM  +G+  +   +T  +DG  + G +  A  L+  +  
Sbjct: 398 SSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEG 457

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                D  A++  I+GL   G +  A+++F  +     +PN   YN +I+G CN G++ +
Sbjct: 458 RGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQE 517

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  L  +M      PD+ T +++I+G  +       +++   M    ++PD    + ++D
Sbjct: 518 ALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLID 577



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 256/568 (45%), Gaps = 58/568 (10%)

Query: 24  NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILL-ASLAKNKH 82
           NF+++++ F     R+G + V       C+    ++     P V ++NIL+ A   + + 
Sbjct: 151 NFNAVILGF----CRKGHVKV--GESLLCV----MQKFKCQPDVYAYNILINAYCTRGQT 200

Query: 83  YDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
           +D       +   G  P+L T+  +IN FC  G +      F  +  +   PN   +N+L
Sbjct: 201 FDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTL 260

Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI------------------------ 173
           + G      I +A  L+ ++K+    P+  T+N L+                        
Sbjct: 261 MNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGS 320

Query: 174 -----------NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
                      +GLC  G    A+   E+M     E G+   P  V +++II    + G 
Sbjct: 321 LSISSLYNICVSGLCWAGWLDEAMKFLEDML----EKGIT--PTVVAFNSIIAAYSRAGL 374

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
            +KA   +  M    + P  +T +SLI GL       EA+ L  EM+ +G+  +   F +
Sbjct: 375 EEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTL 434

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++D   +   +  A  L + M  RG+ P+A  ++  ++G  ++G ++ A ++F  M   G
Sbjct: 435 LLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKG 494

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              ++  YN LI G+C +  ++EAL L REM  KG+ P + T N +  GL +  +++ A 
Sbjct: 495 FMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSAS 554

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
            +F  M   G+  D  TY T IDG CK    +   E+   +     + DI  YN  + GL
Sbjct: 555 DVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGL 614

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C   ++  A  +   L    +VP+ VTYN ++ G+C D  +++A  +   + + A  P+V
Sbjct: 615 CTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNV 673

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKE 550
           +T ++L+  F +   P K      K+ E
Sbjct: 674 VTANLLLSHFCKQGMPEKTIMWGQKLNE 701



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 219/516 (42%), Gaps = 82/516 (15%)

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF---GCEPNVITYNTLINGL 176
           GR+      P+++    L K L    RI +  +++  L+     G  P    +N +I G 
Sbjct: 103 GRMREVGLRPSSSAITILFKLL---LRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGF 159

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR GH  +  +L   M          C+P+   Y+ +I+  C  G    A      M D 
Sbjct: 160 CRKGHVKVGESLLCVMQK------FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDN 213

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              P +VT+ ++I+  C+  +  EA+ LF  M + G  P+VV +N +M+   K R + +A
Sbjct: 214 GCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQA 273

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
           + L + M  + V P+  T+N L+ G    G+    + L   +   G       YNI ++G
Sbjct: 274 NMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSG 333

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYN------------------------------ 386
            C    ++EA+    +M+ KGI PTVV +N                              
Sbjct: 334 LCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPS 393

Query: 387 -----TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
                +L +GL ++ +++ A  L  EM  +G+  +   +T  +DG  + G +  A  L+ 
Sbjct: 394 SLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWN 453

Query: 442 TLRILKCELDIQA-----------------------------------YNCLIDGLCKSG 466
            +       D  A                                   YN LI G C SG
Sbjct: 454 EMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSG 513

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           RL+ A  L   +    L+P++ T NI+I GLC +G+M  A D+F +M      PD++T++
Sbjct: 514 RLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYN 573

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            LI G+ +  +    +E+++KM      PD +  +I
Sbjct: 574 TLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNI 609



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 2/349 (0%)

Query: 223 VDKAKAL--FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           VD+++ +  F+  +      D    ++L+ G        EA  +   M + G++PS    
Sbjct: 58  VDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAI 117

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            ++   L +        +LL  M+ +G RP    +N ++ GFC  G +   E L   M+ 
Sbjct: 118 TILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
             C+ D  +YNILIN YC   +  +AL   R M+  G  P++VT+ T+         +  
Sbjct: 178 FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME 237

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  LFD M+  G   +   Y T ++G  K   I +A  L+  ++      D   +N L+ 
Sbjct: 238 ARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVA 297

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G  + GR +    L   L     +     YNI + GLC  G +D+A     DM E    P
Sbjct: 298 GHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITP 357

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            V+ F+ +I  + R     K  +    M +  + P +   S ++  L K
Sbjct: 358 TVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSK 406


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 225/506 (44%), Gaps = 54/506 (10%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           ++N++I+   K     L +     I R  F+ +A  F  LI+       I +A   F  +
Sbjct: 93  SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMM 152

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K F C+P+V TYNT+++ + R    ++AL ++  M   N      C PN  T+S +IDG+
Sbjct: 153 KDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN------CLPNIATFSILIDGM 206

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G    A  +F +M    I P+ +TY  +I GLC A   + A RLFI M D G  P  
Sbjct: 207 CKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDS 266

Query: 278 VTFNVIMDELCKNRKMDEASRLLDL----------------------------------- 302
           VT+N ++   CK  ++DEA  LL                                     
Sbjct: 267 VTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRK 326

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M +  ++P+   Y  +M G    GK   A  L   M   G   D   YN LI GYC    
Sbjct: 327 MTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGL 386

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           ++EA SL+ E+       +  TY  L  G+     V  A ++F+EM++ G      T+  
Sbjct: 387 LDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNA 446

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCE-------------LDIQAYNCLIDGLCKSGRLK 469
            IDG CK G I +A  LF  + I +               LD  +   +++ LC SG + 
Sbjct: 447 LIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLIL 506

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A+ +   L      PN++TYNI+I G C  G ++ A  LF +++    +PD +T+  LI
Sbjct: 507 KAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLI 566

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMP 555
           +G +  N       +L ++ +    P
Sbjct: 567 NGLLSANREEDAFTVLDQILKNGCTP 592



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 221/473 (46%), Gaps = 40/473 (8%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFC 107
           M++     P V ++N +L  + +    +  L A G++         PN+ T++ILI+  C
Sbjct: 151 MMKDFDCKPDVFTYNTVLHVMVRK---EVVLLALGIYNRMLKLNCLPNIATFSILIDGMC 207

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           K G+       F  + +    PN  T+  +I GL    +   A  LF  +K  GC P+ +
Sbjct: 208 KSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSV 267

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           TYN L++G C+ G    AL L +        +      +   YS +IDGL +    + A+
Sbjct: 268 TYNALLHGFCKLGRVDEALGLLKYFEKDRYVL------DKQGYSCLIDGLFRARRFEDAQ 321

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
             + +M + NI PDV+ Y  ++ GL  A  + +A RL  EM ++G+ P    +N ++   
Sbjct: 322 VWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGY 381

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C    +DEA  L   + +     +ACTY  L+ G C  G +  A+++F  ME  GC    
Sbjct: 382 CDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSV 441

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           V++N LI+G+CK   +E+A  L+ +M   G  P      +LFL L               
Sbjct: 442 VTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNP------SLFLRL--------------- 479

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
            Q      DT +  T ++ LC +G I++A  +   L       +I  YN LI G CK+G 
Sbjct: 480 SQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGN 539

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           +  A++LF  L    L P+ VTY  +I GL +  + + A  +   + +N   P
Sbjct: 540 INGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTP 592



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 220/464 (47%), Gaps = 54/464 (11%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +  ++K  G   +   +  LI    +      A+  FE M + +      CKP+  TY+T
Sbjct: 113 VLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFD------CKPDVFTYNT 166

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           ++  + ++  V  A  ++ +M   N  P++ T++ LI G+C +     A ++F EM  + 
Sbjct: 167 VLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRR 226

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P+ +T+ +I+  LC+ +K D A RL   M   G  P++ TYN L+ GFC +G+++ A 
Sbjct: 227 ILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEAL 286

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L    E      D   Y+ LI+G  + +  E+A   YR+M    IKP V+ Y  +  GL
Sbjct: 287 GLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGL 346

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTR---------------------------------- 418
            +  + + AL+L +EM   G+  DT                                   
Sbjct: 347 SKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSA 406

Query: 419 -TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW----- 472
            TYT  I G+C++G + +A ++F  +    C   +  +N LIDG CK+G ++ A      
Sbjct: 407 CTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYK 466

Query: 473 -------ELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
                   LF  L  G   V +  +   M++ LC+ G + KA ++ + + ++  AP++IT
Sbjct: 467 MEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIIT 526

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +++LIHGF +    +   +L  +++ K + PD+     +++ L+
Sbjct: 527 YNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLL 570



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 259/545 (47%), Gaps = 35/545 (6%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILI 103
           A  +FD M +    P  ++ + I+++ L + +  D        +   G  P+  TYN L+
Sbjct: 215 ALQMFDEMTQRRILPNKIT-YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALL 273

Query: 104 NCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           + FCK+GRV  +LG + +    R  +  +   ++ LI GL    R  +A   + K+    
Sbjct: 274 HGFCKLGRVDEALGLLKYFEKDR--YVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+VI Y  ++ GL + G    AL L  EM     E G+V  P+T  Y+ +I G C  G
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMT----ERGLV--PDTHCYNALIKGYCDLG 385

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +D+AK+L L++   +      TY  LI G+C +    +A+++F EM   G  PSVVTFN
Sbjct: 386 LLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFN 445

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRP--------------NACTYNTLMDGFCLMGK 327
            ++D  CK   +++A +LL   ++ G  P              +  +  T+++  C  G 
Sbjct: 446 ALIDGFCKAGNIEKA-QLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGL 504

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           I +A  +   +   G   + ++YNILI+G+CK   +  A  L++E+  KG+ P  VTY T
Sbjct: 505 ILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGT 564

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRIL 446
           L  GL   ++ E A  + D++ ++G    T  Y +F+   C+   I  A  L+ + LR +
Sbjct: 565 LINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSI 624

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               D +    + +   K G ++ A      +   +    +  Y I + GLC  G++++A
Sbjct: 625 PGR-DSEVLKSVEENFEK-GEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEA 682

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             +F  +EE+       +   LI+  +++       E+     +K  M    I + ++  
Sbjct: 683 LKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKS 742

Query: 567 LVKNE 571
           L+++E
Sbjct: 743 LLRSE 747



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 169/358 (47%)

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           V+++ IID L K+   +    +  ++K    +     +  LI      +   +A   F  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M D   +P V T+N ++  + +   +  A  + + M++    PN  T++ L+DG C  GK
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A ++F  M       + ++Y I+I+G C+ ++ + A  L+  M   G  P  VTYN 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  G  ++ +V+ AL L    ++D    D + Y+  IDGL +     +A   +R +    
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            + D+  Y  ++ GL K+G+ K A  L   +    LVP+   YN +I+G C+ G +D+A+
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            L L++ +N       T+ +LI G  R        ++ ++M++    P     + ++D
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALID 449



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 17/333 (5%)

Query: 231 LQMKDENINPDVVTY------NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           L+ K   ++P +VTY      NSL+             R FI         S V+ N+I+
Sbjct: 50  LESKVPFLSPSIVTYIIKNPPNSLL-----------GFRFFIWASKFRRLRSWVSHNMII 98

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D L K+   +   ++L  + + G   +A  +  L+  +  M  I +A E F  M+   CK
Sbjct: 99  DMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCK 158

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D  +YN +++   + + V  AL +Y  M+     P + T++ L  G+ +  + ++AL++
Sbjct: 159 PDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQM 218

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           FDEM +  +  +  TYT  I GLC+      A  LF  ++   C  D   YN L+ G CK
Sbjct: 219 FDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCK 278

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            GR+  A  L         V +   Y+ +I GL    + + A+  +  M E+   PDVI 
Sbjct: 279 LGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVIL 338

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           + +++ G  +  +      LL++M E+ ++PD 
Sbjct: 339 YTIMMKGLSKAGKFKDALRLLNEMTERGLVPDT 371



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 116/222 (52%)

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           VS+N++I+   K+   E    + +E+   G   +   +  L     ++  +E A++ F+ 
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
           M+      D  TY T +  + +   ++ A+ ++  +  L C  +I  ++ LIDG+CKSG+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
            + A ++F  +    ++PN +TY I+I GLC   + D A  LF+ M+++   PD +T++ 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           L+HGF ++    +   LL   ++ + + D    S ++D L +
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFR 313



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 6/224 (2%)

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           ++ +LI  Y K   +E+A+  +  M     KP V TYNT+   +     V  AL +++ M
Sbjct: 128 AFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRM 187

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL---RILKCELDIQAYNCLIDGLCKS 465
            +     +  T++  IDG+CK+G    A+++F  +   RIL  ++    Y  +I GLC++
Sbjct: 188 LKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKI---TYTIIISGLCQA 244

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            +   A+ LF ++     +P+ VTYN ++ G C  G++D+A  L    E++    D   +
Sbjct: 245 QKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGY 304

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             LI G  R            KM E  + PD  + +I++  L K
Sbjct: 305 SCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSK 348



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/212 (16%), Positives = 85/212 (40%), Gaps = 35/212 (16%)

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           + V++N +   L + +  E   ++  E++R G +     +T  I    K   I +AVE F
Sbjct: 90  SWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESF 149

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             ++   C+                                   P+V TYN ++  +   
Sbjct: 150 EMMKDFDCK-----------------------------------PDVFTYNTVLHVMVRK 174

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
             +  A  ++  M +    P++ TF +LI G  +  +     ++  +M +++++P+    
Sbjct: 175 EVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITY 234

Query: 561 SIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           +I++  L + + +  +   F+  +  G + +S
Sbjct: 235 TIIISGLCQAQKADVAYRLFIAMKDHGCIPDS 266


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 241/499 (48%), Gaps = 18/499 (3%)

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL-----G 115
           H    P S  N+LL + A  + + T L    L+  + + ++ I+       +S       
Sbjct: 82  HLDGAPSSLPNLLLTASAAVRPHATSLR---LYSRMKSLSLPISTASLHPLLSALPSAPA 138

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           F  F  + R        TFN +++ L +  +   A  L  ++      PN +TYNT+I G
Sbjct: 139 FALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAG 194

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C  G    AL++  EM    G       PN  TY T+I G CK G VD+A  +F +M  
Sbjct: 195 FCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT 249

Query: 236 EN-INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
           +  + P+ V YN+LI G C     + A      M+++GV  +V T+N+++  L  + +  
Sbjct: 250 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 309

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
           EA  L++ M  +G+  +  TYN L++G C  G + +A E+F +M   G +   V+Y  LI
Sbjct: 310 EAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 369

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
               K  +V+E   L+ E V +GI+P +V YN L         ++ A ++  EM++  +A
Sbjct: 370 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 429

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            D  TY T + GLC  G + EA +L   +     + D+  YN LI G    G +K A  +
Sbjct: 430 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRI 489

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              + +    P ++TYN +IQGLC +GQ D A ++  +M EN   PD  T+  LI G   
Sbjct: 490 RNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 549

Query: 535 INEPSKVNELLHKMKEKKV 553
            +E +  +E L      KV
Sbjct: 550 EDERAIDDERLAAADAAKV 568



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 242/517 (46%), Gaps = 26/517 (5%)

Query: 63  SPPPVSSFNILLASLAKNKHYDTRLNATGLFPNL-----YTYNILINCFCKIGRVSLGFI 117
           SP   ++  +  ++L+ +K     L+   + P+L        N+L+     +   +    
Sbjct: 54  SPTSAAALALFKSALSADKA----LSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLR 109

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            + R+       + A+ + L+  L +      A ALF  +          T+N ++  LC
Sbjct: 110 LYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRHLC 165

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
             G    AL L  +M           +PN VTY+T+I G C  G V  A  +  +M++  
Sbjct: 166 SAGKPARALELLRQMP----------RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 215

Query: 238 -INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQPSVVTFNVIMDELCKNRKMDE 295
            I P+  TY ++I G C     +EA ++F EM+ +G V+P  V +N ++   C   K+D 
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A    D MV+RGV     TYN L+    + G+   A EL   M   G   D  +YNILIN
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+CK   V++AL ++  M  +G++ TVVTY +L   L +  QV+   KLFDE  R G+  
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D   Y   I+    +G I  A E+   +   +   D   YN L+ GLC  GR+  A +L 
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + P++VTYN +I G    G +  A  +  +M      P ++T++ LI G  + 
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515

Query: 536 NEPSKVNELLHKMKEKKVMPDASI-VSIVVDLLVKNE 571
            +      ++ +M E  + PD S  +S++  L  ++E
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 196/380 (51%), Gaps = 15/380 (3%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCFCKI 109
           +LR  P P  V+ +N ++A           L+         G+ PN YTY  +I+ +CK+
Sbjct: 176 LLRQMPRPNAVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 234

Query: 110 GRVSLGFIAFGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
           GRV      F  +L +    P A  +N+LI G   + ++  A     ++   G    V T
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 294

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++ L   G    A  L EEM    G  G+    +  TY+ +I+G CKEG V KA  
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEM----GGKGLAL--DVFTYNILINGHCKEGNVKKALE 348

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
           +F  M    +   VVTY SLI+ L       E  +LF E + +G++P +V +N +++   
Sbjct: 349 IFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHS 408

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
            +  +D A  ++  M ++ + P+  TYNTLM G CL+G+++ A +L   M   G + D V
Sbjct: 409 TSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLV 468

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YN LI+GY    +V++AL +  EM++KG  PT++TYN L  GL +  Q + A  +  EM
Sbjct: 469 TYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 528

Query: 409 QRDGVAADTRTYTTFIDGLC 428
             +G+  D  TY + I+GL 
Sbjct: 529 VENGITPDDSTYISLIEGLT 548


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 228/471 (48%), Gaps = 6/471 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++  +G  P + TY+  I+  CK+G V    +    +  +    N+ +FN +I G     
Sbjct: 346 KIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRG 405

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            + EA  +  ++K+ G  P+V +Y+ LIN  C  G  M  L+L EEM +         KP
Sbjct: 406 EVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ------IKP 459

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + V+Y+++I GLCK+  +  A  +F  +   +   D   Y +LI G C   D + A +L 
Sbjct: 460 SIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLL 519

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM+   + P+  +   ++    K    D+A  + + M++ G+ P+    N ++DG C  
Sbjct: 520 EEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRA 579

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G    A  L    +  G   +  SYN +I   CK    E AL L   M+ + + P+VV Y
Sbjct: 580 GYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNY 639

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           +TL  G  +    + A+ LF  M + G+  +  TYT  +     +  + EA  +F+ ++ 
Sbjct: 640 STLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKE 699

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
               LD  +Y  LI G C +  +K AW LF  +      PNV+TY  +I G C   ++D 
Sbjct: 700 RGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDL 759

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           A  +F  M  ++  PDV+T+ +LI  + +     + ++L   MK+K V+PD
Sbjct: 760 ATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPD 810



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 233/495 (47%), Gaps = 12/495 (2%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +++LI+ F     +      F         P+  T N L+K L   +R+     +F +L
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308

Query: 158 KAFGCEPNVITYNTLINGLCR-----TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           K  G  PN+ TY  ++N  C       G    A+ L +   +G        KP  VTYST
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGE-------KPTVVTYST 361

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            I GLCK G V+ A  L   +   N   +  ++N +I+G C   +  EA ++  EM   G
Sbjct: 362 YIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSG 421

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           + P V +++++++  C    + +   L++ M    ++P+  +Y +L+ G C    +  A 
Sbjct: 422 ILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAV 481

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           ++F S+ +  CK+D   Y  LI+G+C   +++ A+ L  EM+   + PT  +  +L  G 
Sbjct: 482 DIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGY 541

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           +++   + AL++F+ M RDG+  DT      +DG C+ GY  EA+ L    +     L+ 
Sbjct: 542 YKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNP 601

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            +YN +I  LCK G  + A EL   +    ++P+VV Y+ +I G        +A +LF  
Sbjct: 602 HSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTR 661

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
           M +     ++ T+ +L+  F   ++  +   +  +MKE+ +  D    + ++     N  
Sbjct: 662 MVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNRE 721

Query: 573 SLKSLPSFLVQERQG 587
             K+   F    R+G
Sbjct: 722 MKKAWALFEEMSREG 736



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 176/381 (46%), Gaps = 7/381 (1%)

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           V +  +I        ++ A  +F   K   + PD+ T N L+  L  AN     +R+F E
Sbjct: 248 VVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEE 307

Query: 268 MMDQGVQPSVVTFNVIMDELCK----NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           + D+G  P++ T+ ++M+  C     +  M +A+ +L  + + G +P   TY+T + G C
Sbjct: 308 LKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLC 367

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +G +  A  L  ++       +  S+N +I G+CK  EV EAL +  EM S GI P V 
Sbjct: 368 KVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVY 427

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +Y+ L         V   L L +EM+   +     +YT+ I GLCK   +  AV++F ++
Sbjct: 428 SYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C+ D   Y  LIDG C  G +  A +L   +    LVP   +   +I+G    G  
Sbjct: 488 GASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLF 547

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D+A ++F  M  +   PD I  + ++ G  R     +   LL   +E     +    + +
Sbjct: 548 DQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAI 607

Query: 564 VDLLVKN---EISLKSLPSFL 581
           +  L K    E +L+ LP  L
Sbjct: 608 IYKLCKEGYPERALELLPRML 628



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 6/299 (2%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P  ++   LI  + K+G        F  +LR    P+    N ++ G        EA 
Sbjct: 527 LVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEAL 586

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            L    +  G   N  +YN +I  LC+ G+   AL L   M   N        P+ V YS
Sbjct: 587 TLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRN------VLPSVVNYS 640

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I G  K+    +A  LF +M    I  ++ TY  L+    H++  +EA  +F EM ++
Sbjct: 641 TLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKER 700

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+    +++  ++   C NR+M +A  L + M + G  PN  TY  ++DGFC   +I+ A
Sbjct: 701 GLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLA 760

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
             +F  M       D V+Y +LI+ Y K+   ++A  LY  M  KG+ P  +T+N L L
Sbjct: 761 TWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGL 819



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 7/358 (1%)

Query: 214 IDGLCKEGFVDKAKALFLQMKD--ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           I G C E   D  + LF    D  +++    V ++ LI      +    A  +F      
Sbjct: 218 IVGFCNEAKYDTFE-LFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHV 276

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC----LMGK 327
           G++P + T N ++  L +  +++   R+ + +  RG  PN  TY  +M+ +C        
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG 336

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           + +A  + G +   G K   V+Y+  I+G CK   VE AL L R +          ++N 
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +  G  +  +V  AL++ +EM+  G+  D  +Y+  I+  C  G +++ ++L   +   +
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            +  I +Y  LI GLCK   L+ A ++F S+       +   Y  +I G C  G MD A 
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            L  +M  N   P   +   LI G+ ++    +  E+ + M    + PD    + ++D
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILD 574


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 226/445 (50%), Gaps = 16/445 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN +I+ FCK+ ++        R+    F P+  T+N +I  L    ++  A  +
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYST 212
             +L    C P VITY  LI      G    A+ L EEM A G         P+  TY+ 
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-------LLPDMYTYNA 257

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           II G+CKEG V++A  L   +  +   PDV++YN L+    +   W+E ++L  EM  +G
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
            +P+ VT+++++  LC+  ++DEA  +L +M+++ + P+  +Y+ L+   C  G+++ A 
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            +   M S GC  D V+YN ++   CKN    +AL ++ ++   G  P V +YNT+   L
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
           +       AL +   M   G+  D  TY + I  LC++G + EA+ L   +        +
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 497

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            +YN ++ GLCK  R+  A  +F  +      PN  TY ++I+G+   G   +A    ++
Sbjct: 498 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA----ME 553

Query: 513 MEENAAAPDVITFDMLIHGFIRINE 537
           +  +  + DVI+ D     F R+N+
Sbjct: 554 LANSLFSRDVISQD----SFKRLNK 574



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 235/464 (50%), Gaps = 7/464 (1%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N  CK G+ +        ++   +TP+      LIKG      I +A+ +   L++  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 142

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            EP+V  YN +I+G C+      A  +   M    G +     P+ VTY+ +I  LC   
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRM-KARGFL-----PDIVTYNIMIGSLCNRR 196

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +  A  +  Q+  +N  P V+TY  LI         NEA +L  EM+ +G+ P + T+N
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            I+  +CK   ++ A+ L+  +  +G  P+  +YN L+  F   GK +  E+L   M S 
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           GC+ + V+Y+ILI+  C+   ++EA+S+ + M+ K + P   +Y+ L   L +  +++ A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           + + D M  +G   D   Y T +  LCKNG   +A+E+F  LR + C  ++ +YN +I  
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 436

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L   G    A  +  ++    + P+ +TYN +I  LC DG +++A  L  DME++   P 
Sbjct: 437 LWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 496

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           VI++++++ G  ++        +  +M EK   P+ +   ++++
Sbjct: 497 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 540



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 212/437 (48%), Gaps = 6/437 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           IL S   P+   +N++I G    ++I  A  +  ++KA G  P+++TYN +I  LC    
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
             +AL + +++   N      C P  +TY+ +I+    EG +++A  L  +M    + PD
Sbjct: 198 LGLALTVLDQLLLDN------CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPD 251

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           + TYN++I G+C       A  L   +  +G +P V+++N+++       K DE  +L+ 
Sbjct: 252 MYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVA 311

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M  RG  PN  TY+ L+   C  G+I+ A  +   M       D  SY+ LI+  CK  
Sbjct: 312 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 371

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            ++ A+ +   M+S G  P +V YNT+   L +      AL++F++++  G   +  +Y 
Sbjct: 372 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 431

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I  L   G    A+ +   +     + D   YN LI  LC+ G ++ A  L   +   
Sbjct: 432 TMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 491

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P V++YNI++ GLC   ++D A  +F +M E    P+  T+ +LI G       ++ 
Sbjct: 492 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 551

Query: 542 NELLHKMKEKKVMPDAS 558
            EL + +  + V+   S
Sbjct: 552 MELANSLFSRDVISQDS 568



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 200/414 (48%), Gaps = 35/414 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N +++   K    +       R+ A G  P++ TYNI+I   C   ++ L    
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L     P   T+  LI+    E  I EA  L  ++ A G  P++ TYN +I G+C+
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
            G    A  L   + +   E  V+                             C+PN VT
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +I  LC+ G +D+A ++   M ++ + PD  +Y+ LI  LC     + A  +   M+
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P +V +N I+  LCKN   ++A  + + +   G  PN  +YNT++      G  +
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA  +  +M S G   D+++YN LI+  C++  VEEA+ L  +M   G +PTV++YN + 
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           LGL ++ +++ A+ +F EM   G   +  TY   I+G+   G+  EA+EL  +L
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 194/408 (47%), Gaps = 12/408 (2%)

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+N  C+ G    +L   E + N          P+ +  + +I G      ++KA  + +
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKG------YTPDVILCTKLIKGFFNFKNIEKASRV-M 136

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           ++ + +  PDV  YN++I G C  N    A ++   M  +G  P +VT+N+++  LC  R
Sbjct: 137 EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           K+  A  +LD ++     P   TY  L++   + G IN A +L   M + G   D  +YN
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            +I G CK   VE A  L   + SKG +P V++YN L        + +   KL  EM   
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   +  TY+  I  LC+ G I EA+ + + +   +   D  +Y+ LI  LCK GRL  A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             +   +     +P++V YN ++  LC +G  ++A ++F  +      P+V +++ +I  
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 436

Query: 532 FIRINEPSKVNELLHKMKEKKVMPDA----SIVSIVV-DLLVKNEISL 574
                + S+   ++  M  K + PD     S++S +  D LV+  I L
Sbjct: 437 LWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGL 484



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 147/282 (52%), Gaps = 12/282 (4%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V S+NILL +      +D        + + G  PN  TY+ILI+  C+ GR+      
Sbjct: 285 PDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 344

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++    TP+  +++ LI  L  E R+  A  +   + + GC P+++ YNT++  LC+
Sbjct: 345 LKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCK 404

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+   AL +F ++       G+ C PN  +Y+T+I  L   G   +A  +   M  + I
Sbjct: 405 NGNANQALEIFNKLR------GMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGI 458

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD +TYNSLI  LC      EA  L  +M   G +P+V+++N+++  LCK R++D+A  
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 518

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           +   M+++G RPN  TY  L++G    G    A EL  S+ S
Sbjct: 519 MFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 1/333 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L++  C A  +NE+      ++++G  P V+    ++      + +++ASR+++++ +  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESH 142

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+   YN ++ GFC + +I  A ++   M++ G   D V+YNI+I   C  +++  AL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           ++  +++     PTV+TY  L         +  A+KL +EM   G+  D  TY   I G+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           CK G +  A EL  +L    CE D+ +YN L+      G+     +L   +      PN 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VTY+I+I  LC  G++D+A  +   M E    PD  ++D LI    +         ++  
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           M     +PD    + ++  L KN  + ++L  F
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIF 415



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 7/147 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           N+A  IF+  LR    PP VSS+N ++++L         L       + G+ P+  TYN 
Sbjct: 409 NQALEIFN-KLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNS 467

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+C C+ G V         + +S F P   ++N ++ GL    RI +A  +F ++   G
Sbjct: 468 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNL 188
           C PN  TY  LI G+   G    A+ L
Sbjct: 528 CRPNETTYILLIEGIGFAGWRTEAMEL 554


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 261/521 (50%), Gaps = 31/521 (5%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD-TRLNATGLFP-----------NLYTYNILINC 105
           +++ P+ P  SS   +L SL  N   D   LN   L P             + + + I+ 
Sbjct: 46  IKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHS 105

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEP 164
           +C +      F+   ++L            SL++ + +      A+++FT  L+A G   
Sbjct: 106 YCTMTH----FLCTHKMLSEA--------QSLLQFVVSRKGKNSASSVFTSVLEARGTHQ 153

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           + + ++ L+N    +G+   A+  F  +   N +I      ++  Y  + D L K     
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF----HSCGY--LFDRLMKLNLTS 207

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A A + ++ D    PDV  +N L+H LC  +  NEA+ LF E+  +G++P+VV+FN ++
Sbjct: 208 PAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLI 267

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           +  CK+  +D+  RL   M++  V P+  TY+ L++G C  G+++ A +LF  M   G  
Sbjct: 268 NGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV 327

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +DV++  LING+C     +  + +Y++M+ KG+KP V+TYNTL  GL ++  +  A KL
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL 387

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             EM + G+  D  TYT  IDG CK G +  A+E+ + +     ELD  A+  LI G C+
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            G++  A      +    + P+  TY ++I G C  G +     L  +M+ +   P V+T
Sbjct: 448 EGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVT 507

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +++L++G  +  +    N LL  M    V+PD    +I+++
Sbjct: 508 YNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 196/373 (52%), Gaps = 17/373 (4%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V  FN+L+  L K    +        +   GL P + ++N LIN +CK G +  GF 
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               ++ +   P+  T++ LI GL  E ++ +A  LF ++   G  PN +T+ TLING C
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            TG   + + ++++M       GV  KP+ +TY+T+I+GLCK G + +AK L ++M    
Sbjct: 342 VTGRADLGMEIYQQMLRK----GV--KPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PD  TY  LI G C   D   A  +  EM+ +G++   V F  ++   C+  ++ EA 
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           R L  M++ G++P+  TY  ++ GFC  G +    +L   M+  G     V+YN+L+NG 
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD-GVAAD 416
           CK  +++ A  L   M++ G+ P  +TYN L  G    H      + FD++Q + G+  D
Sbjct: 516 CKQGQMKNANMLLDAMLNLGVVPDDITYNILLEG----HCKHGNREDFDKLQSEKGLVQD 571

Query: 417 TRTYTTFIDGLCK 429
             +YT+ I  L K
Sbjct: 572 YGSYTSLIGDLRK 584



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 184/365 (50%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + + +S +++     G+   A   F  ++  N+     +   L   L   N  + A   +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            E++D G  P V  FNV+M  LCK  K++EA  L   + +RG+RP   ++NTL++G+C  
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G +++   L   M       D  +Y++LING CK  ++++A  L+ EM  +G+ P  VT+
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            TL  G     + +  ++++ +M R GV  D  TY T I+GLCK G + EA +L   +  
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              + D   Y  LIDG CK G L+ A E+   +    +  + V +  +I G C +GQ+ +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A     +M E    PD  T+ M+IHGF +  +     +LL +M+    +P     +++++
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLN 513

Query: 566 LLVKN 570
            L K 
Sbjct: 514 GLCKQ 518



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 20/295 (6%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           S+ ++  +   LC ++ + EA  LL  +V R                   GK N A  +F
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSR------------------KGK-NSASSVF 142

Query: 336 GS-MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
            S +E+ G    ++ +++L+N Y  +    +A+  +R +    ++    +   LF  L +
Sbjct: 143 TSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMK 202

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           ++    A   ++E+   G   D   +   +  LCK   I EA  LF  +        + +
Sbjct: 203 LNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           +N LI+G CKSG L   + L   +    + P+V TY+++I GLC +GQ+D A  LFL+M 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +    P+ +TF  LI+G           E+  +M  K V PD    + +++ L K
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 218/417 (52%), Gaps = 7/417 (1%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+++ YN +I+ FCK  RV        R+ +  F P+  T+N LI       R+  A  +
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             +L    C+P VITY  LI      G    A+ L +EM +         +P+  TY+ +
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG------LRPDRYTYNVV 257

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ++G+CKEG +D+A     ++        V TYN L+  L +   W   ++L  +M+ +G 
Sbjct: 258 VNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGC 317

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P+ +T++ ++  LC++ K+DEA  +L +M ++ + P+  +Y+ L+   C  GK++ A E
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIE 377

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
               M S G   D +SYN ++   CKN   +EAL+++ ++   G  P   +YNTLF  L+
Sbjct: 378 FLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALW 437

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RILKCELDI 452
                  AL +  EM  +G+  D  TY + I  LC++G + +A+EL   +    KC+  +
Sbjct: 438 SSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTV 497

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            +YN ++ GLCK  R+  A E+  ++ +   +PN  TY ++IQG+   G    A +L
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 202/411 (49%), Gaps = 36/411 (8%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N +++   K    D       R+   G  P++ TYNILI  FC  GR+ L    
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++L+    P   T+  LI+    +  I EA  L  ++ + G  P+  TYN ++NG+C+
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
            G    A      ++      GV                              C+PN +T
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YST+I  LC++G +D+AK +   MK++ + PD  +Y+ LI  LC     + A     +M+
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G  P ++++N I+  LCKN   DEA  + + + + G  PNA +YNTL       G   
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTVVTYNTL 388
           RA  +   M S G   D+++YN LI+  C++  V++A+ L  +M  S+  +PTV++YNT+
Sbjct: 444 RALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
            LGL ++ ++  A+++   M  +G   +  TYT  I G+   G+  +A+EL
Sbjct: 504 LLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 185/392 (47%), Gaps = 7/392 (1%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G +P+VI    LI G         A+ + E +           KP+   Y+ +I G CK 
Sbjct: 107 GYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-------KPDVFAYNAVISGFCKA 159

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             VD A  +  +MK     PDVVTYN LI   C     + A R+  +++    +P+V+T+
Sbjct: 160 DRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITY 219

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            ++++       +DEA +LLD M+ RG+RP+  TYN +++G C  G ++RA E    +  
Sbjct: 220 TILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISK 279

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC     +YNIL+       + E    L  +M+ KG +P  +TY+TL   L    +++ 
Sbjct: 280 NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDE 339

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A  +   M+   +A D  +Y   I  LC+ G +  A+E    +       DI +YN ++ 
Sbjct: 340 AKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILA 399

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
            LCK+G    A  +F  L      PN  +YN +   L + G   +A  + L+M  N   P
Sbjct: 400 SLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDP 459

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           D IT++ LI    R     +  ELL  M E +
Sbjct: 460 DEITYNSLISCLCRDGLVDQAIELLVDMFESE 491



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 194/398 (48%), Gaps = 7/398 (1%)

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           +N  C++     +L   + M N         KP+ +  + +I G      ++KA  + ++
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRG------YKPDVILCTKLIKGFFNMKKIEKAIQV-ME 136

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           + +++  PDV  YN++I G C A+  + A ++   M  +G +P VVT+N+++   C   +
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           +D A R++D +++   +P   TY  L++     G I+ A +L   M S G + D  +YN+
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++NG CK   ++ A      +   G    V TYN L   L    + E+  KL  +M   G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
              +  TY+T I  LC++G I EA  + + ++      D  +Y+ LI  LC+ G++  A 
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           E    +  G  +P++++YN ++  LC +G  D+A ++F  + E    P+  +++ L    
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               +  +   ++ +M    + PD    + ++  L ++
Sbjct: 437 WSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRD 474



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 172/350 (49%), Gaps = 14/350 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILI 103
           A  + D +L+ +   P V ++ IL+ +       D  +       + GL P+ YTYN+++
Sbjct: 200 ALRVMDQLLKDN-CKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVV 258

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           N  CK G +   F    RI ++      +T+N L++ L  E +      L + +   GCE
Sbjct: 259 NGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCE 318

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           PN ITY+TLI  LCR G    A N+ + M            P+  +Y  +I  LC+EG V
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLKVMKEK------ALAPDGYSYDPLISALCREGKV 372

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A      M      PD+++YNS++  LC   + +EA  +F ++ + G  P+  ++N +
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTL 432

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMG 342
              L  +     A  ++  M+  G+ P+  TYN+L+   C  G +++A EL   M ES  
Sbjct: 433 FGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEK 492

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           C+   +SYN ++ G CK + + +A+ +   MV++G  P   TY  L  G+
Sbjct: 493 CQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 161/355 (45%), Gaps = 37/355 (10%)

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA--CT------------- 314
           DQ        F   ++  CK+ K DE+   L  MV RG +P+   CT             
Sbjct: 70  DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129

Query: 315 -------------------YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
                              YN ++ GFC   +++ A ++   M+  G + D V+YNILI 
Sbjct: 130 KAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            +C    ++ AL +  +++    KPTV+TY  L         ++ A+KL DEM   G+  
Sbjct: 190 NFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRP 249

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  TY   ++G+CK G +  A E    +    C   +  YN L+  L   G+ ++  +L 
Sbjct: 250 DRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLM 309

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +      PN +TY+ +I  LC DG++D+A+++   M+E A APD  ++D LI    R 
Sbjct: 310 SDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCRE 369

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
            +     E L  M     +PD    + ++  L KN  + ++L  F   E+ GEVG
Sbjct: 370 GKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIF---EKLGEVG 421



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 146/288 (50%), Gaps = 13/288 (4%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           VS++NILL  L     ++      + +   G  PN  TY+ LI   C+ G++        
Sbjct: 286 VSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLK 345

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +      P+  +++ LI  L  E ++  A      + + G  P++++YN+++  LC+ G
Sbjct: 346 VMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNG 405

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +   ALN+FE++    GE+G  C PN  +Y+T+   L   G   +A  + L+M    I+P
Sbjct: 406 NADEALNIFEKL----GEVG--CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDP 459

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRL 299
           D +TYNSLI  LC     ++A  L ++M + +  QP+V+++N ++  LCK +++ +A  +
Sbjct: 460 DEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEV 519

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           L  MV  G  PN  TY  L+ G    G    A EL   + +M    +D
Sbjct: 520 LAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAISED 567



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 8/243 (3%)

Query: 332 EELFGSMESMGCKHD------DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           ++ F   E+   KHD      D ++   +N  CK+ + +E+L   + MV++G KP V+  
Sbjct: 56  QQQFRVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILC 115

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L  G F + ++E A+++ + +++ G   D   Y   I G CK   +  A ++   ++ 
Sbjct: 116 TKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKK 174

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              E D+  YN LI   C  GRL  A  +   L      P V+TY I+I+     G +D+
Sbjct: 175 RGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDE 234

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV- 564
           A  L  +M      PD  T++++++G  +     +  E L ++ +   +   S  +I++ 
Sbjct: 235 AMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLR 294

Query: 565 DLL 567
           DLL
Sbjct: 295 DLL 297


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 261/521 (50%), Gaps = 31/521 (5%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD-TRLNATGLFP-----------NLYTYNILINC 105
           +++ P+ P  SS   +L SL  N   D   LN   L P             + + + I+ 
Sbjct: 46  IKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHS 105

Query: 106 FCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK-LKAFGCEP 164
           +C +      F+   ++L            SL++ + +      A+++FT  L+A G   
Sbjct: 106 YCTMTH----FLCTHKMLSEA--------QSLLQFVVSRKGKNSASSVFTSVLEARGTHQ 153

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           + + ++ L+N    +G+   A+  F  +   N +I      ++  Y  + D L K     
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF----HSCGY--LFDRLMKLNLTS 207

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A A + ++ D    PDV  +N L+H LC  +  NEA+ LF E+  +G++P+VV+FN ++
Sbjct: 208 PAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLI 267

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           +  CK+  +D+  RL   M++  V P+  TY+ L++G C  G+++ A +LF  M   G  
Sbjct: 268 NGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV 327

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +DV++  LING+C     +  + +Y++M+ KG+KP V+TYNTL  GL ++  +  A KL
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL 387

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             EM + G+  D  TYT  IDG CK G +  A+E+ + +     ELD  A+  LI G C+
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            G++  A      +    + P+  TY ++I G C  G +     L  +M+ +   P V+T
Sbjct: 448 EGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVT 507

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +++L++G  +  +    N LL  M    V+PD    +I+++
Sbjct: 508 YNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 184/365 (50%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           + + +S +++     G+   A   F  ++  N+     +   L   L   N  + A   +
Sbjct: 154 SNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY 213

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            E++D G  P V  FNV+M  LCK  K++EA  L   + +RG+RP   ++NTL++G+C  
Sbjct: 214 EEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKS 273

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G +++   L   M       D  +Y++LING CK  ++++A  L+ EM  +G+ P  VT+
Sbjct: 274 GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            TL  G     + +  ++++ +M R GV  D  TY T I+GLCK G + EA +L   +  
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
              + D   Y  LIDG CK G L+ A E+   +    +  + V +  +I G C +GQ+ +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A     +M E    PD  T+ M+IHGF +  +     +LL +M+    +P     +++++
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLN 513

Query: 566 LLVKN 570
            L K 
Sbjct: 514 GLCKQ 518



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 20/295 (6%)

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           S+ ++  +   LC ++ + EA  LL  +V R                   GK N A  +F
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRK------------------GK-NSASSVF 142

Query: 336 GS-MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
            S +E+ G    ++ +++L+N Y  +    +A+  +R +    ++    +   LF  L +
Sbjct: 143 TSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMK 202

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
           ++    A   ++E+   G   D   +   +  LCK   I EA  LF  +        + +
Sbjct: 203 LNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           +N LI+G CKSG L   + L   +    + P+V TY+++I GLC +GQ+D A  LFL+M 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           +    P+ +TF  LI+G           E+  +M  K V PD    + +++ L K
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 242/475 (50%), Gaps = 13/475 (2%)

Query: 60  MHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVS 113
           M  SP   +  +IL   L + + +D+       + + GL P+++ Y +L  C  K G  S
Sbjct: 158 MKCSPDSKACLSIL-NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                   +      PN   +   I  L  ++++ EA  +F  +K  G  PN+ TY+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +G C+TG+   A  L++E+            PN V + T++DG CK   +  A++LF+ M
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVTARSLFVHM 330

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               ++P++  YN LIHG C + +  EA  L  EM    + P V T+ ++++ LC   ++
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA+RL   M    + P++ TYN+L+ G+C    + +A +L   M + G + + ++++ L
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+GYC  ++++ A+ LY EM  KGI P VVTY  L    F+   ++ AL+L+ +M   G+
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  T+   +DG  K G +  A++ ++     +   +   + CLI+GLC++G +  A  
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            F  +    + P++ +Y  M++G   + ++     L  DM +    P+++   +L
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL 625



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 215/447 (48%), Gaps = 7/447 (1%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           +P++    S++ GL    R       +  + + G  P+V  Y  L     + G       
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L +EM +    +G+  KPN   Y+  I  LC++  +++A+ +F  MK   + P++ TY++
Sbjct: 221 LLDEMTS----LGI--KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I G C   +  +A  L+ E++   + P+VV F  ++D  CK R++  A  L   MV+ G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           V PN   YN L+ G C  G +  A  L   MES+    D  +Y ILING C   +V EA 
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+++M ++ I P+  TYN+L  G  + + +E AL L  EM   GV  +  T++T IDG 
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C    I  A+ L+  + I     D+  Y  LID   K   +K A  L+  +    + PN 
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
            T+  ++ G   +G++  A D + +  +  +  + + F  LI G  +     + +     
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574

Query: 548 MKEKKVMPD-ASIVSIVVDLLVKNEIS 573
           M+   + PD  S VS++   L +  I+
Sbjct: 575 MRSCGITPDICSYVSMLKGHLQEKRIT 601



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 189/382 (49%), Gaps = 2/382 (0%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           + + LFEE    + E+   C P++    +I++GL +    D     +  M    + PDV 
Sbjct: 143 LEMGLFEEALWVSREMK--CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y  L         +++ ++L  EM   G++P+V  + + + +LC++ KM+EA ++ +LM
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            + GV PN  TY+ ++DG+C  G + +A  L+  +       + V +  L++G+CK +E+
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
             A SL+  MV  G+ P +  YN L  G  +   +  A+ L  EM+   ++ D  TYT  
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           I+GLC    + EA  LF+ ++  +       YN LI G CK   ++ A +L   +    +
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN++T++ +I G CN   +  A  L+ +M      PDV+T+  LI    +     +   
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500

Query: 544 LLHKMKEKKVMPDASIVSIVVD 565
           L   M E  + P+    + +VD
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVD 522


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 238/462 (51%), Gaps = 14/462 (3%)

Query: 68  SSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
            +F +L   L +   +       T L + G+     TY ++++  C  G  +   +   R
Sbjct: 20  QAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA-LELVR 78

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
            L   +TP    +N +I GL   SR+M+A  +  K+      PNV TY  L+NGLCR+  
Sbjct: 79  ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           T +A  +F+EM   NG     CKPN +TY T+I  L + G +D+A  + ++ +   +  D
Sbjct: 139 TKLAREVFQEMKR-NG-----CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL- 300
           V+T  +++ GLC A+  ++A +   EM   GV+P+ VT++ ++    ++ ++D   R   
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +   ++G    A  Y   +D  C  G ++RA +    +   G   D V+Y++LIN + + 
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            + + +L L  +M   G+KP VVTY+TL   L +  + + A +L + M+  G   +  TY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            + +DGLCK+G + E   ++  +   +C  D+  Y+ +++GL K+G L  A +LF  +  
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
               P+   Y+++I  LC  G++++A  ++  ME   A  ++
Sbjct: 433 SREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNI 474



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 208/418 (49%), Gaps = 8/418 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+  ++ GL       +A  L  +L      P V  YN +I GLCR    M A  + E+M
Sbjct: 56  TYKLVVDGLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKM 114

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                E  +V  PN  TY+ +++GLC+      A+ +F +MK     P+ +TY +LI  L
Sbjct: 115 V----EESIV--PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHL 168

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A + +EA R+ IE     +   V+T   I+  LCK  ++D+A + ++ M Q GVRPN 
Sbjct: 169 SRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNE 228

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYR 371
            TY+ L+ GF   G+++R    F   ++  G   +  +Y   ++  CK   ++ A     
Sbjct: 229 VTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVE 288

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           E+   G+ P VVTY+ L        Q + +L+L ++M+R+GV  D  TY+T I+ LCK  
Sbjct: 289 ELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKER 348

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
              +A  L   +       ++  YN ++DGLCKSG++     ++  +      P+VVTY+
Sbjct: 349 KFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYS 408

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           I++ GL   G +D A  LF  ++ +   PD   + M+I    R  +  +   + H M+
Sbjct: 409 IIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 222/443 (50%), Gaps = 12/443 (2%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           ++  F  L   L   S+  E   LFT L + G      TY  +++GLC  G    AL L 
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
            E++        V  P    Y+ II GLC+   V  A  +  +M +E+I P+V TY  L+
Sbjct: 78  RELSG-------VYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           +GLC +N    A+ +F EM   G +P+ +T+  ++  L +  ++DEA R++  + QR + 
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM--IEQRSLE 188

Query: 310 --PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              +  T  T++ G C   +++ A +    M  MG + ++V+Y+ L++G+ ++ E++  +
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248

Query: 368 SLYRE-MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             + E    KG       Y      L +   ++ A K  +E+++ GV  D  TY+  I+ 
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
             + G    ++EL   +R    + D+  Y+ LI+ LCK  + + A+ L   +      PN
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTYN ++ GLC  G+MD+   ++  M ++  +PDV+T+ ++++G  +        +L  
Sbjct: 369 VVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            +K  +  PDA+  S+V+  L +
Sbjct: 429 LIKSSREGPDAAAYSMVITSLCR 451



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 45/375 (12%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN++TY IL+N  C+  +  L    F  + R+   PN  T+ +LI+ L     I EA 
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  + ++     +VIT  T++ GLC+      AL   EEM     ++GV  +PN VTYS
Sbjct: 179 RVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR----QMGV--RPNEVTYS 232

Query: 212 TII------------------------------------DGLCKEGFVDKAKALFLQMKD 235
            ++                                    D LCK G++D+A+    +++ 
Sbjct: 233 NLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQ 292

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + PDVVTY+ LI+    A  ++ +  L  +M   GV+P VVT++ +++ LCK RK  +
Sbjct: 293 SGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQD 352

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A RLL+LM   G  PN  TYN++MDG C  GK++    ++  M    C  D V+Y+I++N
Sbjct: 353 AFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMN 412

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G  K   ++ A+ L+  + S    P    Y+ +   L    ++E A  ++  M+   VA 
Sbjct: 413 GLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVT-VAG 471

Query: 416 DT--RTYTTFIDGLC 428
           D   R     +  LC
Sbjct: 472 DNICRALAGLVAALC 486



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 4/344 (1%)

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDEL 287
           LF  +    +     TY  ++ GLC A   N+A  L  E+   GV  P+V  +N I+  L
Sbjct: 41  LFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGL 98

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
           C+  ++ +A ++L+ MV+  + PN  TY  L++G C   K   A E+F  M+  GCK + 
Sbjct: 99  CRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNP 158

Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
           ++Y  LI    +  E++EAL +  E  S  +   V+T  T+  GL +  +++ ALK  +E
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEE 218

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC-ELDIQAYNCLIDGLCKSG 466
           M++ GV  +  TY+  + G  ++G +   +  F   +  K   L+  AY   +D LCK+G
Sbjct: 219 MRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAG 278

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            L  A +    L    +VP+VVTY+++I      GQ D + +L  DM  N   PDV+T+ 
Sbjct: 279 YLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYS 338

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            LI+   +  +      LL  M+     P+    + V+D L K+
Sbjct: 339 TLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 155/346 (44%), Gaps = 37/346 (10%)

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           AK L   +++ G +     F ++  +L +  K  E  RL  L+  RGV     TY  ++D
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G C  G  N+A EL   +  +      + YN +I G C+   V +A  +  +MV + I P
Sbjct: 63  GLCGAGMANQALELVRELSGVYTPTVFI-YNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            V TY  L  GL   ++ + A ++F EM+R+G   +  TY T I  L + G I EA+ + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG---- 496
              R L+   D+     ++ GLCK+ RL  A +    +    + PN VTY+ ++ G    
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 497 --------------------------------LCNDGQMDKARDLFLDMEENAAAPDVIT 524
                                           LC  G +D+AR    ++ ++   PDV+T
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + MLI+ F R  +     ELL  M+   V PD    S ++++L K 
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 17/229 (7%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G+ P++ TY++LIN F + G+          + R+   P+  T+++LI  L  E +
Sbjct: 290 LRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERK 349

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  L   ++A G  PNV+TYN++++GLC++G       ++E M          C P+
Sbjct: 350 FQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR------CSPD 403

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTYS I++GL K G +D A  LF  +K     PD   Y+ +I  LC A    EA  ++ 
Sbjct: 404 VVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY- 462

Query: 267 EMMDQGVQPSVVTFNV------IMDELCKNRKMDEASRLLDLMVQRGVR 309
                G++ +V   N+      ++  LC  ++ D A R++++  +RG R
Sbjct: 463 ----HGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERGHR 507



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 1/140 (0%)

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            ++D QA+  L   L +  +      LF  L    +V    TY +++ GLC  G  ++A 
Sbjct: 15  AKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQAL 74

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +L  ++      P V  ++ +I G  R +      ++L KM E+ ++P+    +I+++ L
Sbjct: 75  ELVRELS-GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGL 133

Query: 568 VKNEISLKSLPSFLVQERQG 587
            ++  +  +   F   +R G
Sbjct: 134 CRSNKTKLAREVFQEMKRNG 153


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 224/454 (49%), Gaps = 11/454 (2%)

Query: 64  PPPVSSFNILLASLA-KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           P  V S    + SLA   K +D      G   ++Y Y  L++   +  R       F R 
Sbjct: 11  PRLVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRE 70

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L +   P+  +F  +I+          A      +++ G  P+V  YN ++ G C  G  
Sbjct: 71  LCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRV 130

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             AL  F       G++G  CKPN  TY+T+I+GLCK G +D A  LF ++  + ++PD 
Sbjct: 131 GRALIKF-------GKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDG 183

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY++L+HGLC A     A +++  M++         +N + D  CK R++DEA  +L  
Sbjct: 184 FTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKT 243

Query: 303 MVQRGVRPNACTYNTLMDGFC-LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           M+QR  +P+  TYN +++G C    +I  A  LF  M    C  + V+Y  +I G  K  
Sbjct: 244 MIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIY 303

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           EV+  L L++ M   G+ P    Y++L     ++ +++ A  +  +  R+ V  D   YT
Sbjct: 304 EVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYT 363

Query: 422 TFIDGLC--KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           T I G C  +   + EA+ LF+ ++  +   ++  YN ++ GLCK+GR   A+++F  + 
Sbjct: 364 TLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMF 423

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
                PN +T+ +M  G+ +  + DK   +F+DM
Sbjct: 424 KVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDM 457



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 210/421 (49%), Gaps = 10/421 (2%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +  L+  L    R  EA   F +     C P++ ++  +I   C   +   A      M 
Sbjct: 47  YTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMR 106

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
           +    +G+   P+   Y+ ++ G C  G V +A   F +M  +   P+V TYN++I+GLC
Sbjct: 107 S----LGI--PPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLC 159

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                + A  LF  +    V P   T++ ++  LC+  +++ A ++ D+M++     +A 
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG 219

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK-EVEEALSLYRE 372
            YN + DGFC   +++ A E+  +M    CK   V+YN +ING C+ K  +EEA  L+++
Sbjct: 220 AYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQ 279

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
           MV     P  VTY T+ LGL +I++V+  L+LF  M + G++ D   Y + I    K   
Sbjct: 280 MVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRK 339

Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKS--GRLKFAWELFCSLPHGVLVPNVVTY 490
           + EA  + +         D+  Y  LI G C++   R+  A  LF ++    + PNV+TY
Sbjct: 340 LDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITY 399

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           NI+++GLC  G+ D+A  +F +M +   +P+ +TF ++  G I   +  K   +   M  
Sbjct: 400 NIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVY 459

Query: 551 K 551
           K
Sbjct: 460 K 460



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 166/332 (50%), Gaps = 2/332 (0%)

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
           K E    DV  Y  L+H L  A    EA R F   +    +PS+ +F +I+   C  R  
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
             A R L  M   G+ P+   YN ++ G+C +G++ RA   FG M    CK +  +YN +
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTV 154

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ING CK  +++ A+ L+  +    + P   TY+TL  GL +  ++E A+K++D M     
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK-SGRLKFAW 472
             D   Y    DG CK   + EA+E+ +T+   +C+  +  YNC+I+G+C+   R++ A+
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAY 274

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            LF  +      PN VTY  MI GL    ++ +  +LF  M +   +PD   +  LI+ F
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAF 334

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           +++ +  +   +L       V PD  + + ++
Sbjct: 335 VKVRKLDEAKSILQDAARNHVGPDVYMYTTLI 366



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 190/386 (49%), Gaps = 39/386 (10%)

Query: 65  PPVSSFNILLASL------AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + SF I++          +   Y   + + G+ P++  YN+++  +C +GRV    I 
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIK 136

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           FG++ ++C  PN AT+N++I GL    +I  A  LFT+L     +P+  TY+TL++GLC+
Sbjct: 137 FGKMGKTC-KPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 179 TGHTMIALNLFEEM--ANGNGEIGVV---------------------------CKPNTVT 209
                 A+ +++ M  AN +G+ G                             CKP+ VT
Sbjct: 196 AERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVT 255

Query: 210 YSTIIDGLCK-EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           Y+ II+G+C+ +  +++A  LF QM   +  P+ VTY ++I GL    +      LF  M
Sbjct: 256 YNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGM 315

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK- 327
              G+ P    ++ ++    K RK+DEA  +L    +  V P+   Y TL+ G+C   K 
Sbjct: 316 SKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKP 375

Query: 328 -INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            ++ A  LF +M+      + ++YNI++ G CK    +EA  +++EM      P  +T+ 
Sbjct: 376 RVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFK 435

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDG 412
            + +G+    + +   ++F +M   G
Sbjct: 436 VMTMGMIHCRKTDKFERIFMDMVYKG 461



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 194/404 (48%), Gaps = 14/404 (3%)

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K  G   +V  Y  L++ L R   T  A+  F+       E+   C+P+  +++ II   
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKR------ELCAHCRPSLYSFTIIIQCF 89

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM--MDQGVQP 275
           C      +A      M+   I PDV  YN ++ G C   D     R  I+   M +  +P
Sbjct: 90  CNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYC---DLGRVGRALIKFGKMGKTCKP 146

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +V T+N +++ LCK  K+D A  L   +    V P+  TY+TL+ G C   ++  A +++
Sbjct: 147 NVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVY 206

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M       D  +YN + +G+CK + V+EAL + + M+ +  KP+VVTYN +  G+ + 
Sbjct: 207 DMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQY 266

Query: 396 -HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            +++E A +LF +M       +  TY T I GL K   +   +ELF+ +       D  A
Sbjct: 267 KNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYA 326

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN--DGQMDKARDLFLD 512
           Y+ LI    K  +L  A  +        + P+V  Y  +I G C     ++D+A  LF +
Sbjct: 327 YHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQN 386

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           M++    P+VIT+++++ G  +     +  ++  +M + K  P+
Sbjct: 387 MKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPN 430



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 11/335 (3%)

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           DW+  +        +G +  V  +  ++  L + R+  EA R     +    RP+  ++ 
Sbjct: 32  DWSSKQ--------EGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFT 83

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            ++  FC +    RA    G M S+G   D  +YN+++ GYC    V  AL  + +M  K
Sbjct: 84  IIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKM-GK 142

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
             KP V TYNT+  GL +  +++ A+ LF  +  D V  D  TY+T + GLC+   +  A
Sbjct: 143 TCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAA 202

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           ++++  +     + D  AYN + DG CK  R+  A E+  ++      P+VVTYN +I G
Sbjct: 203 IKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIING 262

Query: 497 LCN-DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           +C    ++++A  LF  M  +   P+ +T+  +I G  +I E  +  EL   M +  + P
Sbjct: 263 VCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSP 322

Query: 556 DASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
           D      ++   VK    L    S L    +  VG
Sbjct: 323 DGYAYHSLIYAFVKVR-KLDEAKSILQDAARNHVG 356


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 249/502 (49%), Gaps = 66/502 (13%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  ++  ++ LI   C+ GR+      F  +   C +PN  T+N+++ GL   +R
Sbjct: 25  MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC-SPNVITYNTVVNGLCKANR 83

Query: 147 IMEAAALFTKLK-----AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
           I E   LF  ++     + GCEP+VI+Y+T+I+ LC+      A   F+ M        V
Sbjct: 84  IDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR------AV 137

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP--------------------- 240
            C PN VTYS++IDGLCK   VD+A +L +Q+K E++ P                     
Sbjct: 138 GCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSEC 197

Query: 241 --------------DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                         +++ +N+++H L   ++  +A + F  ++  G +P+VVT+NV +  
Sbjct: 198 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 257

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LCK  K+DEA R+L  MV+  V P+  TY++++DGFC  G++++A+++F  M    C   
Sbjct: 258 LCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPH 317

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V++  L++G+ ++K+  EA  ++ +MV+ G  P + TYN L   +     VE AL+++ 
Sbjct: 318 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 377

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL----------------RILKCEL 450
           +M+R     D  TY   I  LC+   + EA E    +                 +L  + 
Sbjct: 378 KMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQG 437

Query: 451 DIQAYNCLIDG---LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           ++     ++D    +CK+G    A E+   +    + P+  TY  +++ LC   ++D A 
Sbjct: 438 EVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAI 497

Query: 508 DLFLDMEENAAAPDVITFDMLI 529
             F  M     AP ++T+ +LI
Sbjct: 498 AEFEKMASRGCAPGLVTYTLLI 519



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 226/442 (51%), Gaps = 12/442 (2%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           + ++I G     ++ +A  L  ++K  G + +V+ ++TLI GLCR G    AL  F+ M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK-----DENINPDVVTYNSL 248
                 G  C PN +TY+T+++GLCK   +D+   LF  M+          PDV++Y+++
Sbjct: 61  ------GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I  LC A   ++A   F  M   G  P+VVT++ ++D LCK  ++DEA  LL  +    +
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P A  YN +++GF   GK +   EL   M+  G   + + +N +++   KN E E+A  
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
            +  ++  G KP VVTYN    GL +  +V+ A ++  EM    V  D  TY++ IDG C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G + +A ++F  + + +C      +  L+ G  +  + + A+ +   + +   +P + 
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           TYN+++  +C    ++ A +++  M+     PD  T+  LI    R     +  E L  M
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM 414

Query: 549 KEKKVMPDASIVSIVVDLLVKN 570
           +   V+P+ +I   +V++L K 
Sbjct: 415 EADNVVPNGAICHALVEVLCKQ 436



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 214/491 (43%), Gaps = 32/491 (6%)

Query: 48  NEAFCIFDYMLRM----HPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLY 97
           +E   +FD M +     H   P V S++ ++ +L K +  D       R+ A G  PN+ 
Sbjct: 85  DEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVV 144

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TY+ LI+  CK+ RV   +    ++      P A  +N+++ G   + +  E   L   +
Sbjct: 145 TYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHM 204

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
           K  G   N+I +N +++ L +      A   FE +           KPN VTY+  + GL
Sbjct: 205 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK------KPNVVTYNVAVHGL 258

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           CK G VD+A  + L+M +  + PDV+TY+S+I G C A   ++A  +F  MM     P  
Sbjct: 259 CKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHP 318

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VTF  ++    +++K  EA R+ + MV  G  P   TYN LMD  C    +  A E++  
Sbjct: 319 VTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHK 378

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+    + D  +Y  LI   C+ + V+EA      M +  + P     + L   L +  +
Sbjct: 379 MKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 438

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           V+ A  + D +                  +CK G   EAVE+   + +     D   Y  
Sbjct: 439 VDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVA 482

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++  LC   R+  A   F  +      P +VTY ++I   C+    D A  +F  M    
Sbjct: 483 VLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAG 542

Query: 518 AAPDVITFDML 528
             P   T   L
Sbjct: 543 FTPQAQTMRTL 553


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 252/558 (45%), Gaps = 69/558 (12%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLF------PNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N ++    K+      L    L       P+ +TYNILI   C         + 
Sbjct: 228 PSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELL 287

Query: 119 FGRILRSCFTPNAATFNSLIKG-----------------------------------LHA 143
              I+R  FTP   TF ++I G                                   L  
Sbjct: 288 NDAIVRG-FTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIK 346

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           + R  EA    +++ A G  PNV+ Y ++I+G C+ G    AL +F  M +        C
Sbjct: 347 KCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG------C 400

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +PN  TYS++I GL ++  + KA AL  +M+++ I P V+TY +LI G C  ++++ A R
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 460

Query: 264 LFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           LF EMM+Q G+ P    +NV+   LCK+ + +EA   L   V++GV     TY +L+DGF
Sbjct: 461 LF-EMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGF 516

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              G  + A  L   M + GCK D  +Y++L+   CK K++ EALS+  +M   G+K  +
Sbjct: 517 SKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNI 576

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           V Y  +   + +  + +HA  +F+EM   G      TYT FI   CK G I EA  L   
Sbjct: 577 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 636

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ------- 495
           +       D+  YN  I+G    G +  A+     +      PN  TY I+++       
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSL 696

Query: 496 ---------GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
                    G+ N  ++D    L   M ++   P  +T+  +I GF +     +   L  
Sbjct: 697 VDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFD 756

Query: 547 KMKEKKVMPDASIVSIVV 564
            M+ K + P+  I ++++
Sbjct: 757 HMRGKDISPNEEIYTMLI 774



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 241/522 (46%), Gaps = 47/522 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A GL PN+  Y  +I+ +CK+G+V      F  +      PNA T++SLI GL  + ++ 
Sbjct: 362 ANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLH 421

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANG--------NGEI 199
           +A AL TK++  G  P VITY TLI G C+      A  LFE M  NG        N   
Sbjct: 422 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 481

Query: 200 GVVCKP-----------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             +CK                    VTY++++DG  K G  D A  L  +M +E    D 
Sbjct: 482 HALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADS 541

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TY+ L+  LC     NEA  +  +M   GV+ ++V + +I+ E+ K  K D A  + + 
Sbjct: 542 YTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNE 601

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+  G +P+A TY   +  +C +G+I  AE L G ME  G   D V+YN+ ING      
Sbjct: 602 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGY 661

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTL---FL-------------GLFEIHQVEHALKLFD 406
           ++ A S  + M+    +P   TY  L   FL             G++   +++   +L +
Sbjct: 662 MDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLE 721

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M + G+     TY++ I G CK   + EA  LF  +R      + + Y  LI   C   
Sbjct: 722 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIK 781

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD---MEENAAAPDVI 523
               A      +      P++ +Y+ +I GLC++G  DKA+ LF D   ME+     + +
Sbjct: 782 LFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDY--NHNEV 839

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            + +L  G ++       ++LL  M+ +    D+   S+V D
Sbjct: 840 AWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTD 881



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 244/507 (48%), Gaps = 39/507 (7%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G   N Y+Y ILI   C+   V    +    +++   + N  T+  LIKGL  E RI  A
Sbjct: 155 GCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGA 214

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +  ++   G  P+V TYN +I+G C++G    AL + + +   NG     C P+  TY
Sbjct: 215 RRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMERNG-----CNPDDWTY 268

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I GLC E   D+A+ L          P V+T+ ++I+G C A   ++A R+   M+ 
Sbjct: 269 NILIYGLCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLS 327

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
              +  +  + V+++ L K  +  EA   +  M   G+ PN   Y +++DG+C +GK+  
Sbjct: 328 SNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGA 387

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E+F  ME  GC+ +  +Y+ LI G  +++++ +A++L  +M   GI P V+TY TL  
Sbjct: 388 ALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQ 447

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL----------- 439
           G  + H+ ++A +LF+ M+++G+  D + Y      LCK+G   EA              
Sbjct: 448 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKV 507

Query: 440 ----------------FRTLRILK-----CELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
                           F  + I K     C+ D   Y+ L+  LCK  +L  A  +   +
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               +  N+V Y I+I  +  +G+ D A+ +F +M  +   P   T+ + I  + +I + 
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVD 565
            +   L+ +M+   V PD    ++ ++
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFIN 654



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 180/364 (49%), Gaps = 2/364 (0%)

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G + KA  L + M       +  +Y  LI GLC      EA  L + M+  G   ++ T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
            +++  LCK  ++  A R+L+ M  RGV P+  TYN ++DG+C  G++  A  +   ME 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            GC  DD +YNILI G C  K  +EA  L  + + +G  PTV+T+  +  G  +  +++ 
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKP-DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           AL++   M       D + Y   I+ L K     EA E    +       ++  Y  +ID
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           G CK G++  A E+F  + H    PN  TY+ +I GL  D ++ KA  L   M+E+   P
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 437

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            VIT+  LI G  + +E      L   M++  + PD    +++   L K+  + ++  SF
Sbjct: 438 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAY-SF 496

Query: 581 LVQE 584
           LV++
Sbjct: 497 LVRK 500



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 204/435 (46%), Gaps = 27/435 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD---TRLNATGLFPNLYTYNILIN 104
           + AF +F+ M+  +   P   ++N+L  +L K+   +   + L   G+     TY  L++
Sbjct: 456 DNAFRLFE-MMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVD 514

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
            F K G      +   +++      ++ T++ L++ L  + ++ EA ++  ++   G + 
Sbjct: 515 GFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKC 574

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           N++ Y  +I+ + + G    A ++F EM +         KP+  TY+  I   CK G ++
Sbjct: 575 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH------KPSATTYTVFISSYCKIGQIE 628

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A+ L  +M+ + + PDVVTYN  I+G  H    + A      M+D   +P+  T+ +++
Sbjct: 629 EAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILL 688

Query: 285 DELCKNR----------------KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
               K                  ++D   +LL+ MV+ G+ P A TY++++ GFC   ++
Sbjct: 689 KHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRL 748

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  LF  M       ++  Y +LI   C  K   +A+S   +M+  G +P + +Y+ L
Sbjct: 749 EEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYL 808

Query: 389 FLGLFEIHQVEHALKLF-DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
            +GL +    + A  LF D +  +    +   +    DGL K G++    +L   +    
Sbjct: 809 IVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRH 868

Query: 448 CELDIQAYNCLIDGL 462
           C++D + Y+ + D +
Sbjct: 869 CQIDSETYSMVTDNI 883


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 238/462 (51%), Gaps = 14/462 (3%)

Query: 68  SSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
            +F +L   L +   +       T L + G+     TY ++++  C  G  +   +   R
Sbjct: 20  QAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA-LELVR 78

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
            L   +TP    +N +I GL   SR+M+A  +  K+      PNV TY  L+NGLCR+  
Sbjct: 79  ELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           T +A  +F+EM   NG     CKPN +TY T+I  L + G +D+A  + ++ +   +  D
Sbjct: 139 TKLAREVFQEMKR-NG-----CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTD 192

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL- 300
           V+T  +++ GLC A+  ++A +   EM   GV+P+ VT++ ++    ++ ++D   R   
Sbjct: 193 VITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE 252

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +   ++G    A  Y   +D  C  G ++RA +    +   G   D V+Y++LIN + + 
Sbjct: 253 EEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARA 312

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            + + +L L  +M   G+KP VVTY+TL   L +  + + A +L + M+  G   +  TY
Sbjct: 313 GQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTY 372

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            + +DGLCK+G + E   ++  +   +C  D+  Y+ +++GL K+G L  A +LF  +  
Sbjct: 373 NSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKS 432

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
               P+   Y+++I  LC  G++++A  ++  ME   A  ++
Sbjct: 433 SREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNI 474



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 208/418 (49%), Gaps = 8/418 (1%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+  ++ GL       +A  L  +L      P +  YN +I GLCR    M A  + E+M
Sbjct: 56  TYKLVVDGLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKM 114

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                E  +V  PN  TY+ +++GLC+      A+ +F +MK     P+ +TY +LI  L
Sbjct: 115 V----EESIV--PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHL 168

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
             A + +EA R+ IE     +   V+T   I+  LCK  ++D+A + ++ M Q GVRPN 
Sbjct: 169 SRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNE 228

Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESM-GCKHDDVSYNILINGYCKNKEVEEALSLYR 371
            TY+ L+ GF   G+++R    F   ++  G   +  +Y   ++  CK   ++ A     
Sbjct: 229 VTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVE 288

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           E+   G+ P VVTY+ L        Q + +L+L ++M+R+GV  D  TY+T I+ LCK  
Sbjct: 289 ELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKER 348

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
              +A  L   +       ++  YN ++DGLCKSG++     ++  +      P+VVTY+
Sbjct: 349 KFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYS 408

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           I++ GL   G +D A  LF  ++ +   PD   + M+I    R  +  +   + H M+
Sbjct: 409 IIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 222/443 (50%), Gaps = 12/443 (2%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           ++  F  L   L   S+  E   LFT L + G      TY  +++GLC  G    AL L 
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
            E++        V  P    Y+ II GLC+   V  A  +  +M +E+I P+V TY  L+
Sbjct: 78  RELSG-------VYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           +GLC +N    A+ +F EM   G +P+ +T+  ++  L +  ++DEA R++  + QR + 
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM--IEQRSLE 188

Query: 310 --PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
              +  T  T++ G C   +++ A +    M  MG + ++V+Y+ L++G+ ++ E++  +
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248

Query: 368 SLYRE-MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             + E    KG       Y      L +   ++ A K  +E+++ GV  D  TY+  I+ 
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
             + G    ++EL   +R    + D+  Y+ LI+ LCK  + + A+ L   +      PN
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTYN ++ GLC  G+MD+   ++  M ++  +PDV+T+ ++++G  +        +L  
Sbjct: 369 VVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            +K  +  PDA+  S+V+  L +
Sbjct: 429 LIKSSREGPDAAAYSMVITSLCR 451



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 45/375 (12%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN++TY IL+N  C+  +  L    F  + R+   PN  T+ +LI+ L     I EA 
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  + ++     +VIT  T++ GLC+      AL   EEM     ++GV  +PN VTYS
Sbjct: 179 RVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR----QMGV--RPNEVTYS 232

Query: 212 TII------------------------------------DGLCKEGFVDKAKALFLQMKD 235
            ++                                    D LCK G++D+A+    +++ 
Sbjct: 233 NLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQ 292

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + PDVVTY+ LI+    A  ++ +  L  +M   GV+P VVT++ +++ LCK RK  +
Sbjct: 293 SGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQD 352

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A RLL+LM   G  PN  TYN++MDG C  GK++    ++  M    C  D V+Y+I++N
Sbjct: 353 AFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMN 412

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G  K   ++ A+ L+  + S    P    Y+ +   L    ++E A  ++  M+   VA 
Sbjct: 413 GLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVT-VAG 471

Query: 416 DT--RTYTTFIDGLC 428
           D   R     +  LC
Sbjct: 472 DNICRALAGLVAALC 486



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 185/375 (49%), Gaps = 6/375 (1%)

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
           E GV  K ++  ++ +   L +     +   LF  +    +     TY  ++ GLC A  
Sbjct: 12  EAGV--KVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGM 69

Query: 258 WNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
            N+A  L  E+   GV  P++  +N I+  LC+  ++ +A ++L+ MV+  + PN  TY 
Sbjct: 70  ANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT 127

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L++G C   K   A E+F  M+  GCK + ++Y  LI    +  E++EAL +  E  S 
Sbjct: 128 ILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSL 187

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            +   V+T  T+  GL +  +++ ALK  +EM++ GV  +  TY+  + G  ++G +   
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRV 247

Query: 437 VELFRTLRILKC-ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           +  F   +  K   L+  AY   +D LCK+G L  A +    L    +VP+VVTY+++I 
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
                GQ D + +L  DM  N   PDV+T+  LI+   +  +      LL  M+     P
Sbjct: 308 TFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367

Query: 556 DASIVSIVVDLLVKN 570
           +    + V+D L K+
Sbjct: 368 NVVTYNSVMDGLCKS 382



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 156/346 (45%), Gaps = 37/346 (10%)

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           AK L   +++ GV+     F ++  +L +  K  E  RL  L+  RGV     TY  ++D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G C  G  N+A EL   +  +      + YN +I G C+   V +A  +  +MV + I P
Sbjct: 63  GLCGAGMANQALELVRELSGVYTPTLFI-YNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            V TY  L  GL   ++ + A ++F EM+R+G   +  TY T I  L + G I EA+ + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG---- 496
              R L+   D+     ++ GLCK+ RL  A +    +    + PN VTY+ ++ G    
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 497 --------------------------------LCNDGQMDKARDLFLDMEENAAAPDVIT 524
                                           LC  G +D+AR    ++ ++   PDV+T
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVT 301

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           + MLI+ F R  +     ELL  M+   V PD    S ++++L K 
Sbjct: 302 YSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G+ P++ TY++LIN F + G+          + R+   P+  T+++LI  L  E +
Sbjct: 290 LRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERK 349

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  L   ++A G  PNV+TYN++++GLC++G       ++E M          C P+
Sbjct: 350 FQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR------CSPD 403

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTYS I++GL K G +D A  LF  +K     PD   Y+ +I  LC A    EA  ++ 
Sbjct: 404 VVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMY- 462

Query: 267 EMMDQGVQPSVVTFNV------IMDELCKNRKMDEASRLLDLMVQRGVR 309
                G++ +V   N+      ++  LC   + D A R++++  +RG R
Sbjct: 463 ----HGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHR 507



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 1/139 (0%)

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           ++D QA+  L   L +  +      LF  L    +V    TY +++ GLC  G  ++A +
Sbjct: 16  KVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALE 75

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           L  ++      P +  ++ +I G  R +      ++L KM E+ ++P+    +I+++ L 
Sbjct: 76  LVRELS-GVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLC 134

Query: 569 KNEISLKSLPSFLVQERQG 587
           ++  +  +   F   +R G
Sbjct: 135 RSNKTKLAREVFQEMKRNG 153


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 254/538 (47%), Gaps = 47/538 (8%)

Query: 68  SSFNILLASLAKNK-HYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           S  + L+ +  K++ H++     +++   G+ PN    +IL     + G     +  FG 
Sbjct: 219 SVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGD 278

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           ++R    PN  TFN LI     +       AL   +  F CEP+V +YN +IN  C  G 
Sbjct: 279 VVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQ 338

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
           +  AL+L   M   NG     CKP+  T+ TIID  CKEG V+ A+  F +++D  ++ +
Sbjct: 339 SSYALHLLNLMIE-NG-----CKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQN 392

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN-------------------- 281
            + YN +I G   A D ++A  LF EM  + + P  +TFN                    
Sbjct: 393 TIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLR 452

Query: 282 ---------------VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
                          V +  LC   + DEA +LL+ ++ +G+ P+   +N+++  +   G
Sbjct: 453 DLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAG 512

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
              RA   +G M   G      + + L+    +   ++EA     +M+ KG   T + + 
Sbjct: 513 LEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFT 572

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G F I  V  A  L++EM+  GV  D   +  FI+GLC +G + +A ++F  +   
Sbjct: 573 VLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRK 632

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               +   YN LI G CK G+L  A +L   +    L+P++ T N++I GLC  G+M  A
Sbjct: 633 GFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLA 692

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            + F+DM     +PD++T++ LI G+ +  +    ++L+ KM +    PD +  +I +
Sbjct: 693 IETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRI 750



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 206/460 (44%), Gaps = 6/460 (1%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           TPN +  + L + L           LF  +   G  PN  T+N LI   CR G T I   
Sbjct: 250 TPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEA 309

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L   M          C+P+  +Y+ +I+  C +G    A  L   M +    P + T+ +
Sbjct: 310 LLHVMGK------FRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCT 363

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           +I   C   +   A++ F E+ D G+  + + +N+++    K R + +A+ L + M  + 
Sbjct: 364 IIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKD 423

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + P+  T+NTL+ G    GK      L   +   G  HD    ++ + G C     +EA+
Sbjct: 424 IVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAM 483

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   ++ KGI P+VV +N++          E A   +  M + G+   + T ++ +  L
Sbjct: 484 KLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISL 543

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            + G + EA      +      +   A+  L+DG  + G +  A  L+  +    + P+ 
Sbjct: 544 VRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDA 603

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V +   I GLC  G M  A D+F DM      P+   ++ LI GF ++ + ++  +L+ +
Sbjct: 604 VAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVRE 663

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           M ++ ++PD   V++++  L K      ++ +F+   R G
Sbjct: 664 MNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 8/428 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           E +    +TL+    ++     AL +  +M     E+GV   PN    S +   L + G 
Sbjct: 215 ESDYSVLDTLMRAFVKSEMHFEALEILSKMR----EVGVT--PNPSAISILFRLLIRAGD 268

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFN 281
                 LF  +  +   P+  T+N LI   C    W       + +M +   +P V ++N
Sbjct: 269 CGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKG-WTRIGEALLHVMGKFRCEPDVYSYN 327

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++++  C   +   A  LL+LM++ G +P+  T+ T++D FC  G +  A + F  +E M
Sbjct: 328 IVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDM 387

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   + + YNI+I+GY K +++ +A  L+ EM +K I P  +T+NTL  G +   + E  
Sbjct: 388 GLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDG 447

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +L  ++   G+  D+      + GLC  G   EA++L   L        + A+N +I  
Sbjct: 448 NRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAA 507

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
              +G  + A+  +  +    L P+  T + ++  L   G +D+A     DM +      
Sbjct: 508 YGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVT 567

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            + F +L+ G+ RI   +    L ++MK + V PDA   +  ++ L  + +   +   F 
Sbjct: 568 NMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFS 627

Query: 582 VQERQGEV 589
              R+G V
Sbjct: 628 DMLRKGFV 635



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 35/249 (14%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNIL 102
           +A+ +F  MLR    P     +N L+    K    +  L      N  GL P+++T N++
Sbjct: 621 DAYDVFSDMLRKGFVPNNFV-YNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMI 679

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I   CK GR+ L    F  + R   +P+  T+N+LI G      +  A  L  K+   G 
Sbjct: 680 ICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGW 739

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEM---------ANGNGEIGVVCK--------- 204
           EP++ TYN  I+G C       A+ + EE+            N  I  VC          
Sbjct: 740 EPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNVILDHAMIL 799

Query: 205 ----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
                     PNTVT + ++   CK+G  +KA     ++ + +++ D  T+  +      
Sbjct: 800 TAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRAYRA 859

Query: 255 ANDWNEAKR 263
             +  E KR
Sbjct: 860 LEEGGEKKR 868


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 227/449 (50%), Gaps = 13/449 (2%)

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           C TP   T++  I  L   +RI     L   +  FG  P++   N  I+ LC+      A
Sbjct: 222 CLTP--FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDA 279

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           L + E+M  G G I     P+ VTY+T++  LC      +A  L+ +M    + PDVV  
Sbjct: 280 LQMVEKM-RGKGTI-----PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVAC 333

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            +LI GLC  +   EA  L   M+   ++ SV  +N ++    +   +D+A  ++  M  
Sbjct: 334 GALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRT 393

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G  P   TYN L++ +C +G + +AE L   ME+ G   D  SYN L+ G CK  ++++
Sbjct: 394 NGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDK 453

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A +   + +  G    +V+ N L     ++ +V+ AL+LF EM   G+ AD  TY T I+
Sbjct: 454 AFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLIN 513

Query: 426 GLCKNGYIIEAVELFRTLRILKCELD--IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           GL   GY   A ELF   ++LK ++D  +  YN ++  LCK G LK A ++F  +    +
Sbjct: 514 GLFSVGYYNLAEELFE--QMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEI 571

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P++VTYN +I  L  + +  +A DLF DM      PD +TF  LI+G +     +   E
Sbjct: 572 LPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYE 631

Query: 544 LLHKMKEKKVMPDASIVSIVVDLL-VKNE 571
           +   M E  ++ D  +   ++ +L +KN+
Sbjct: 632 VWEYMMENGIILDREVSERLISVLKLKNK 660



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 195/385 (50%), Gaps = 12/385 (3%)

Query: 65  PPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + + NI +  L K N+ +D      ++   G  P++ TY  ++ C C   R S     
Sbjct: 258 PDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGL 317

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +++    P+     +LI GL   S++ EA  L +++ +   E +V  YN LI+G  R
Sbjct: 318 WEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWR 377

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A  +   M   NG     C+P  VTY+ +++  C  G ++KA+ L  +M+   +
Sbjct: 378 AGSIDKAYTIISFMRT-NG-----CEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGV 431

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           NPD  +YN L+ GLC  +  ++A     + M+ G    +V+ N+++D  CK +K+  A  
Sbjct: 432 NPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALE 491

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L   M  +G++ +A TY TL++G   +G  N AEELF  M       +   YNI+++  C
Sbjct: 492 LFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLC 551

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +++ A  ++  M+ K I P +VTYNTL   L +  +   AL LF +M+  GV  D+ 
Sbjct: 552 KVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSL 611

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTL 443
           T+   I+GL   G    A E++  +
Sbjct: 612 TFKYLINGLLDEGRSTLAYEVWEYM 636



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 185/385 (48%), Gaps = 6/385 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P+++  NI I+C CK  R+        ++      P+  T+ +++  L    R  EA
Sbjct: 255 GFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEA 314

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L+ ++   G +P+V+    LI GLC+      A  L   M + N E+ V        Y
Sbjct: 315 VGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSV------SIY 368

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + +I G  + G +DKA  +   M+     P VVTYN L++  C      +A+ L  +M  
Sbjct: 369 NALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMET 428

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV P   ++N ++  LCK  ++D+A   +   ++ G   +  + N L+D FC + K+  
Sbjct: 429 SGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKS 488

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A ELF  M+  G + D V+Y  LING         A  L+ +M+   I P V  YN +  
Sbjct: 489 ALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLH 548

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L ++  ++ A K+F  M +  +  D  TY T I  L KN   +EA++LF+ +R    E 
Sbjct: 549 HLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEP 608

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELF 475
           D   +  LI+GL   GR   A+E++
Sbjct: 609 DSLTFKYLINGLLDEGRSTLAYEVW 633



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 211/456 (46%), Gaps = 6/456 (1%)

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
           + +  L+ G     +       F ++   GC    I YN  I  L +        +L E+
Sbjct: 156 SLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKN----CCFDLVEK 211

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG 251
                   G+   P   TYS  I  LC+   ++  + L   M     +PD+   N  I  
Sbjct: 212 YYGMALSKGLCLTP--FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDC 269

Query: 252 LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           LC  N  ++A ++  +M  +G  P VVT+  ++  LC N++  EA  L + MV+ G++P+
Sbjct: 270 LCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPD 329

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
                 L+ G C   K+  A EL   M S+  +     YN LI+G+ +   +++A ++  
Sbjct: 330 VVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIIS 389

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            M + G +P VVTYN L      I  +E A  L  +M+  GV  D  +Y   + GLCK  
Sbjct: 390 FMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTH 449

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + +A         +    DI + N LID  CK  ++K A ELF  + +  +  + VTY 
Sbjct: 450 QLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYG 509

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I GL + G  + A +LF  M +    P+V  +++++H   ++ +  +  ++   M +K
Sbjct: 510 TLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQK 569

Query: 552 KVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           +++PD    + ++  L KN  ++++L  F     +G
Sbjct: 570 EILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKG 605



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 12/365 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGR 111
           +R   + P V ++  ++  L  NK +   +         GL P++     LI   CK  +
Sbjct: 286 MRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSK 345

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V   F    R+L      + + +N+LI G      I +A  + + ++  GCEP V+TYN 
Sbjct: 346 VEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNI 405

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+N  C  G    A NL  +M       GV   P+  +Y+ ++ GLCK   +DKA A   
Sbjct: 406 LLNHYCTIGMMEKAENLITKMETS----GV--NPDRYSYNQLLKGLCKTHQLDKAFAFVS 459

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
              +     D+V+ N LI   C       A  LF EM  +G+Q   VT+  +++ L    
Sbjct: 460 DHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVG 519

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
             + A  L + M++  + PN   YN ++   C +G + RA+++F  M       D V+YN
Sbjct: 520 YYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYN 579

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI    KN    EAL L+++M +KG++P  +T+  L  GL +  +   A ++++ M  +
Sbjct: 580 TLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMEN 639

Query: 412 GVAAD 416
           G+  D
Sbjct: 640 GIILD 644



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 41/362 (11%)

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCK 289
           L+  D  ++P VV  N ++ GL   +D   A R +     + G   S      I+  L  
Sbjct: 78  LERLDIELDPFVV--NLVVRGL---SDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFV 132

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           +      S  L  +  +GV  +   Y  L+ G+   GK +     F  M   GC+   + 
Sbjct: 133 DGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGID 192

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE---------- 399
           YN  I    KN   +     Y   +SKG+  T  TY+     L + +++E          
Sbjct: 193 YNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMD 252

Query: 400 -------------------------HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYII 434
                                     AL++ ++M+  G   D  TYTT +  LC N    
Sbjct: 253 RFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFS 312

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           EAV L+  +  +  + D+ A   LI GLCK+ +++ A+EL   +    +  +V  YN +I
Sbjct: 313 EAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALI 372

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            G    G +DKA  +   M  N   P V+T+++L++ +  I    K   L+ KM+   V 
Sbjct: 373 SGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVN 432

Query: 555 PD 556
           PD
Sbjct: 433 PD 434


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 227/456 (49%), Gaps = 18/456 (3%)

Query: 64  PPPVSSFNILLASLAKNKHYD--TRLNAT----GLFPNLYTYNILINCFCKIGRV--SLG 115
           PP  S+FN LL +LA+       T+L A+     + PN+ TY IL+   CK GRV  +L 
Sbjct: 134 PPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALS 193

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL--KAFGCEPNVITYNTLI 173
            +       S   P+    N+++ GL    R+ +A     +      GC PN +TYN L 
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +  CR G+  +A  L  +M            PN VT +TI+ GLC  G V  A   F + 
Sbjct: 254 HAFCRAGNVGMACELVAKMEKER------VTPNAVTLNTIVGGLCWVGRVGAALEFFREK 307

Query: 234 KD--ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +        + VTY++L+    H N+   A  LF EM+D+G  P  + +  ++  L +  
Sbjct: 308 RTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAG 367

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++D+A  +   M + G + +A  YN L+ GFC   ++N A EL G M+  G + D  +YN
Sbjct: 368 RLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYN 427

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            L++G CK  +      L  +M+  G +P+VVT+ TL  G  ++ Q++ AL++F  M   
Sbjct: 428 TLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDES 487

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+  +T  Y T ID LCK+     A+ELF  +R      ++  +N L+ GL      + A
Sbjct: 488 GIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKA 547

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           +EL   +  G   P+ VT +I+++ L   G+ D+ +
Sbjct: 548 FELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLK 583



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 237/506 (46%), Gaps = 20/506 (3%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           PSP  +S+    + S + +   D        L A    P+   +N L++   + G +   
Sbjct: 97  PSPRILSALLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGM 156

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE--PNVITYNTLI 173
              F  +  +   PN  T+  L+KGL    R+ +A ++   +     +  P+V+  N ++
Sbjct: 157 TQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIV 216

Query: 174 NGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           +GLC+TG    A+   EE M + +G     C PNTVTY+ +    C+ G V  A  L  +
Sbjct: 217 DGLCKTGRLQQAVKFVEERMRSVHG-----CAPNTVTYNCLAHAFCRAGNVGMACELVAK 271

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP----SVVTFNVIMDELC 288
           M+ E + P+ VT N+++ GLC       A   F E   + V P    + VT++ ++    
Sbjct: 272 MEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLVGAFL 329

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
               +  A  L   MV  G  P+A  Y T++ G    G+++ A  +  SM+  G + D  
Sbjct: 330 HTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAK 389

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YNILI G+C+ K + EA  L  EM   G++P V TYNTL  GL +        +L  +M
Sbjct: 390 AYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKM 449

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
              G      T+ T I G CK G I EA+ +FR++     + +   YN LID LCKS   
Sbjct: 450 IDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDT 509

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A ELF  +    +  NV T+N +++GL +    +KA +L   M E    PD +T D+L
Sbjct: 510 SLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDIL 569

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVM 554
           +     I E  ++   +      K M
Sbjct: 570 MEWLPVIGETDRLKHFMQHDTTPKRM 595



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 210/444 (47%), Gaps = 10/444 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ + FN+L+  L     +     LF  ++     PNV+TY  L+ GLC+ G    AL++
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN---PDVVTY 245
            + M+    +   VC P+ V  + I+DGLCK G + +A   F++ +  +++   P+ VTY
Sbjct: 195 LDGMSGPESD---VC-PDVVMLNNIVDGLCKTGRLQQA-VKFVEERMRSVHGCAPNTVTY 249

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL--DLM 303
           N L H  C A +   A  L  +M  + V P+ VT N I+  LC   ++  A         
Sbjct: 250 NCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRT 309

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V    R NA TY+TL+  F     +  A ELF  M   G   D + Y  +I+G  +   +
Sbjct: 310 VWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRL 369

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A S+   M   G +     YN L  G     ++  A +L  EM+  G+  D  TY T 
Sbjct: 370 DDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTL 429

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + GLCK G  +   EL   +    C   +  +  LI G CK G++  A  +F S+    +
Sbjct: 430 LSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGI 489

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PN V YN +I  LC       A +LF +M E     +V TF+ L+ G    N P K  E
Sbjct: 490 QPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 544 LLHKMKEKKVMPDASIVSIVVDLL 567
           L+  M+E +  PD   + I+++ L
Sbjct: 550 LMDLMREGRCTPDYVTIDILMEWL 573



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 186/373 (49%), Gaps = 6/373 (1%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+T  ++T++D L + G +     LF  M+D ++ P+VVTY  L+ GLC A    +A  +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 265 FIEMM--DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ--RGVRPNACTYNTLMD 320
              M   +  V P VV  N I+D LCK  ++ +A + ++  ++   G  PN  TYN L  
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVSKGI 378
            FC  G +  A EL   ME      + V+ N ++ G C    V  AL  +RE   V    
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEA 314

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +   VTY+TL       + V  A++LF EM  +G + D   Y T I GL + G + +A  
Sbjct: 315 RGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWS 374

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +  +++    +LD +AYN LI G C+  RL  A+EL   +    L P+V TYN ++ GLC
Sbjct: 375 MATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLC 434

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G      +L   M +    P V+TF  LIHG+ ++ +  +   +   M E  + P+  
Sbjct: 435 KAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTV 494

Query: 559 IVSIVVDLLVKNE 571
           I + ++D L K+ 
Sbjct: 495 IYNTLIDFLCKSR 507



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 132/317 (41%), Gaps = 41/317 (12%)

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           D A  L D +      P+   +NTL+D     G +    +LF SM     + + V+Y IL
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 354 INGYCKNKEVEEALSLYREMVS--KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           + G CK   V +ALS+   M      + P VV  N +  GL +  +++ A+K  +E  R 
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 412 --GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G A +T TY       C+ G +  A EL   +   +   +    N ++ GLC  GR+ 
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298

Query: 470 FAWELF------------CSLPHGVLV-------------------------PNVVTYNI 492
            A E F             ++ +  LV                         P+ + Y  
Sbjct: 299 AALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFT 358

Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           MI GL   G++D A  +   M++     D   +++LI GF R    ++  ELL +MKE  
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418

Query: 553 VMPDASIVSIVVDLLVK 569
           + PD    + ++  L K
Sbjct: 419 LQPDVYTYNTLLSGLCK 435


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 255/514 (49%), Gaps = 18/514 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           LRM P+   + ++N LL ++ KN  +         ++  GL PN  TY ILI+  CK G 
Sbjct: 331 LRMVPN---IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGM 387

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +        R+           +NSLI     +  +  A    +++   G  PN  +Y+ 
Sbjct: 388 MDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSP 447

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I GLCR G    A+ L  +MA    E GV    NT T++ +I+G CK   +D+A  LF 
Sbjct: 448 VIAGLCRKGDLSGAVELHRKMA----EKGVAW--NTYTFTALINGFCKAKKMDEASRLFN 501

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +M + N+ P+ VT+N++I G C   D  +A +L+ +MM +G+ P   T+  ++  LC   
Sbjct: 502 KMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTD 561

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
              +A   +  +       N  +   L+ GFC  G++  A  ++  M   G K D +S+ 
Sbjct: 562 GASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFT 621

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH-QVEHALKLFDEMQR 410
           I++    K  + E++  L+REM  KG++P  V ++T  + ++     +  AL  +DEM  
Sbjct: 622 IIVYAALKQHDSEKSCVLFREMKEKGVRPDNV-FHTCMINMYSKEGNMVQALNCWDEMIA 680

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           DG   +T TYT  ++ LCK+ ++  A  L + +       +   +NC +D     G L+ 
Sbjct: 681 DGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLET 740

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A +L+ ++  G L  N+V+ N +I+G C  GQ+ +A DL     EN   PD I++  +IH
Sbjct: 741 AKDLYFAMLQGFLA-NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIH 799

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              +  + ++  EL ++M  K V PD    +I++
Sbjct: 800 ELCKKGDINEAIELWNEMLYKGVKPDIVAYNILI 833



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 238/485 (49%), Gaps = 9/485 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           +L    + PN++ YN L+N  CK G  S        +      PN  T+  LI  L    
Sbjct: 327 QLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRG 386

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
            + +A  +  +++  G    V  YN+LIN  C+     +A+    EM     EIG+   P
Sbjct: 387 MMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMV----EIGLT--P 440

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N  +YS +I GLC++G +  A  L  +M ++ +  +  T+ +LI+G C A   +EA RLF
Sbjct: 441 NAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLF 500

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            +M +  ++P+ VTFN +++  C    + +A +L D M+ RG+ P+  TY +L+ G CL 
Sbjct: 501 NKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLT 560

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
              ++A+E    +E+     +  S   L++G+C+   + EA  ++ EM   G K  ++++
Sbjct: 561 DGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISF 620

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             +     + H  E +  LF EM+  GV  D   +T  I+   K G +++A+  +  +  
Sbjct: 621 TIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIA 680

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                +   Y  L++ LCKS  L  A EL C  +     +PN  T+N  +     +G ++
Sbjct: 681 DGHLPNTVTYTALVNNLCKSWHLSSA-ELLCKEMLASHFLPNSYTFNCFLDYFATEGNLE 739

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A+DL+  M +   A ++++ + LI GF ++ +  +  +L+ +  E    PD    S V+
Sbjct: 740 TAKDLYFAMLQGFLA-NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVI 798

Query: 565 DLLVK 569
             L K
Sbjct: 799 HELCK 803



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 241/480 (50%), Gaps = 6/480 (1%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G+  + Y Y   I  +C++  +        R+       +A  +N LI GL    R+ E
Sbjct: 191 SGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVRE 250

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +   + A G   + +T  TL+ G CRT    +AL +  +MA     +G V  P+   
Sbjct: 251 AVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMA----RLGFV--PSEAN 304

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            S ++DGL K+G V++A  L  Q+ +  + P++  YN+L++ +C    ++EA RL  EM 
Sbjct: 305 CSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMS 364

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           D+G++P+ VT+ +++  LCK   MD+A  +LD M ++GVR     YN+L++  C    ++
Sbjct: 365 DKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLD 424

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A      M  +G   +  SY+ +I G C+  ++  A+ L+R+M  KG+     T+  L 
Sbjct: 425 MAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALI 484

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  +++ A +LF++M    +  +  T+   I+G C  G I +A +L+  +      
Sbjct: 485 NGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLT 544

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D   Y  LI GLC +     A E    L +   V N  +   ++ G C +G++ +A  +
Sbjct: 545 PDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHV 604

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           + +M       D+I+F ++++  ++ ++  K   L  +MKEK V PD    + ++++  K
Sbjct: 605 WNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSK 664



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 244/515 (47%), Gaps = 14/515 (2%)

Query: 59  RMHPSPPPVSS--FNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIG 110
           RM      VS+  +N+L+  L KN+     ++      A G+  +  T   L+  FC+  
Sbjct: 222 RMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTE 281

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
            + +     G + R  F P+ A  + ++ GL  + R+ EA  L  +L      PN+  YN
Sbjct: 282 ELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYN 341

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            L+N +C+ G    A  L  EM++   E      PN VTY+ +I  LCK G +D A  + 
Sbjct: 342 ALLNNMCKNGMFSEADRLVNEMSDKGLE------PNEVTYAILIHSLCKRGMMDDALCML 395

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +M+++ +   V  YNSLI+  C  +D + A     EM++ G+ P+  +++ ++  LC+ 
Sbjct: 396 DRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRK 455

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
             +  A  L   M ++GV  N  T+  L++GFC   K++ A  LF  M     + ++V++
Sbjct: 456 GDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTF 515

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N +I GYC   ++ +A  LY +M+ +G+ P   TY +L  GL        A +   +++ 
Sbjct: 516 NAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLEN 575

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
           +    +  + T  + G C+ G + EA  ++  + +   +LD+ ++  ++    K    + 
Sbjct: 576 NCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEK 635

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           +  LF  +    + P+ V +  MI     +G M +A + + +M  +   P+ +T+  L++
Sbjct: 636 SCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVN 695

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
              +    S    L  +M     +P++   +  +D
Sbjct: 696 NLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLD 730



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 232/523 (44%), Gaps = 53/523 (10%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++ IL+ SL K    D       R+   G+   +Y YN LINC CK   + +    
Sbjct: 370 PNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGF 429

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              ++    TPNAA+++ +I GL  +  +  A  L  K+   G   N  T+  LING C+
Sbjct: 430 LSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCK 489

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                 A  LF +M   N E      PN VT++ +I+G C  G + KA  L+ QM    +
Sbjct: 490 AKKMDEASRLFNKMTESNLE------PNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGL 543

Query: 239 NPDVVTYNSLI-----------------------------------HGLCHANDWNEAKR 263
            PD  TY SLI                                   HG C      EA  
Sbjct: 544 TPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYH 603

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           ++ EM   G +  +++F +I+    K    +++  L   M ++GVRP+   +  +++ + 
Sbjct: 604 VWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYS 663

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G + +A   +  M + G   + V+Y  L+N  CK+  +  A  L +EM++    P   
Sbjct: 664 KEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSY 723

Query: 384 TYNTLFLGLFEIH-QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           T+N  FL  F     +E A  L+  M + G  A+  +  T I G CK G I EA++L   
Sbjct: 724 TFNC-FLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISR 781

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
                   D  +Y+ +I  LCK G +  A EL+  + +  + P++V YNI+I+     G+
Sbjct: 782 STENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGE 841

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
            DK   +++DM +    P+  T   L   F+  +  SK N L+
Sbjct: 842 SDKCLGIYIDMVKKGVQPNWHTHRAL---FVGTSLMSKGNTLM 881



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 171/361 (47%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+  T S I+  L K      A+ LF  M    +  D   Y + I   C   + + AK L
Sbjct: 160 PDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGL 219

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
              M D+G + S V +NV++  LCKN+++ EA  + + M+ RGV  +  T  TL+ GFC 
Sbjct: 220 VARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCR 279

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
             +++ A E+ G M  +G    + + + +++G  K   VEEA  L  ++    + P +  
Sbjct: 280 TEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFA 339

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           YN L   + +      A +L +EM   G+  +  TY   I  LCK G + +A+ +   +R
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                + +  YN LI+  CK   L  A      +    L PN  +Y+ +I GLC  G + 
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLS 459

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
            A +L   M E   A +  TF  LI+GF +  +  + + L +KM E  + P+    + V+
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519

Query: 565 D 565
           +
Sbjct: 520 E 520



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 175/358 (48%), Gaps = 19/358 (5%)

Query: 40  GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASL------AKNKHYDTRLNATGLF 93
           GDI      +AF ++D M+    +P   + +  L++ L      +K K +   L      
Sbjct: 526 GDIR-----KAFQLYDQMMCRGLTPDNYT-YRSLISGLCLTDGASKAKEFVADLENNCSV 579

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
            N ++   L++ FC+ GR++  +  +  +       +  +F  ++     +    ++  L
Sbjct: 580 LNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVL 639

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F ++K  G  P+ + +  +IN   + G+ + ALN ++EM   +G +     PNTVTY+ +
Sbjct: 640 FREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMI-ADGHL-----PNTVTYTAL 693

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           ++ LCK   +  A+ L  +M   +  P+  T+N  +       +   AK L+  M+ QG 
Sbjct: 694 VNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGF 752

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             ++V+ N ++   CK  ++ EA  L+    + G  P+  +Y+T++   C  G IN A E
Sbjct: 753 LANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIE 812

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           L+  M   G K D V+YNILI     + E ++ L +Y +MV KG++P   T+  LF+G
Sbjct: 813 LWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 146/306 (47%), Gaps = 1/306 (0%)

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G+ P   T + I+  L K R+   A  L D M+  GV  +   Y   +  +C +  +
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A+ L   M+  G K   V YN+LI G CKN+ V EA+ +   M+++G+    VT  TL
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             G     +++ AL++  +M R G        +  +DGL K G + EA  L   L  L+ 
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             +I AYN L++ +CK+G    A  L   +    L PN VTY I+I  LC  G MD A  
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS-IVVDLL 567
           +   M E      V  ++ LI+   + ++       L +M E  + P+A+  S ++  L 
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLC 453

Query: 568 VKNEIS 573
            K ++S
Sbjct: 454 RKGDLS 459



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 4/257 (1%)

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +L L +  G+ P+  T + ++     + +   A  LF  M   G   D+  Y   I  YC
Sbjct: 149 VLHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYC 208

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + + ++ A  L   M  +G K + V YN L  GL +  +V  A+ + + M   GVAAD  
Sbjct: 209 EVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV 268

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--LIDGLCKSGRLKFAWELFC 476
           T  T + G C+   +  A+E+  T  + +        NC  ++DGL K GR++ A+ L C
Sbjct: 269 TCRTLVYGFCRTEELDMALEM--TGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLAC 326

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            L    +VPN+  YN ++  +C +G   +A  L  +M +    P+ +T+ +LIH   +  
Sbjct: 327 QLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRG 386

Query: 537 EPSKVNELLHKMKEKKV 553
                  +L +M+EK V
Sbjct: 387 MMDDALCMLDRMREKGV 403


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 166/582 (28%), Positives = 281/582 (48%), Gaps = 60/582 (10%)

Query: 12  SFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN 71
           S+ +  ++  ++N+SSL+V + +L     D    +P     +FD +L+++          
Sbjct: 115 SYLNELVTPSKNNYSSLVV-WNELVRVFEDFK-FSPT----VFDMILKIYCEK------- 161

Query: 72  ILLASLAKNK-HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
                + KN  H    +   G  P+L + N L++   + G  S   + +  I R    P+
Sbjct: 162 ----GMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPD 217

Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
             T + ++     +  +  A     ++   G E NV+TYN+LI+G    G    A  + +
Sbjct: 218 VFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLK 277

Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLI 249
            M    GE G++   N VT + +I G C++  +++A+ +  +M + E +  D   Y  LI
Sbjct: 278 LM----GERGIL--RNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLI 331

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C     ++A RL  EM++ G++ ++   N +++  CKN ++ EA RLL  MV   + 
Sbjct: 332 DGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLE 391

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           P + +Y+TLMDGFC  G + +A  ++  M  +G + + V++N L+ G C+    E+AL +
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +  M+ +G+ P  V+Y TL   LF++ +   AL L++++   G    T  + T I+G CK
Sbjct: 452 WHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCK 511

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW---------------EL 474
              +IEA E F  ++ L  E D   Y  LIDG CK G ++ A+               EL
Sbjct: 512 MEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIEL 571

Query: 475 FCSLPHGV--------------------LVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           + SL  G+                    L PNVVTY  +I G C++G++DKA   + DM 
Sbjct: 572 YNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMI 631

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           E   AP+VI    ++    R+    + N LL KM    V  D
Sbjct: 632 EKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLD 673



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 244/507 (48%), Gaps = 43/507 (8%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
            G+  N+ T+N L+   C++G        +  +L+   TP+  ++ +L+  L        
Sbjct: 423 VGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFR 482

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A AL+  + A G   +   +NT+ING C+    + A    EE  N   E+G   +P+ VT
Sbjct: 483 ALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEA----EETFNRMKELGF--EPDGVT 536

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y T+IDG CK G V++A  +  +M+ E I P +  YNSLI GL  +    E   L  EM 
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P+VVT+  ++   C   ++D+A      M+++G  PN    + ++     +G+I+
Sbjct: 597 LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRID 656

Query: 330 RAEELFGSMESMGC-----------KHDD------------------------VSYNILI 354
            A  L   M ++             K DD                        V YNI I
Sbjct: 657 EANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAI 716

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G CK+ +V++A  ++  ++ +G  P   TY TL  G      V  A  L DEM + G+A
Sbjct: 717 AGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLA 776

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +  TY   I+GLCK+G +  A +LF  L +     ++ +YN LIDG CK+G  + A +L
Sbjct: 777 PNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDL 836

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              +    + P+++TY+ +I G C  G M KA +L  +M E  A  ++  F  L+ G ++
Sbjct: 837 RNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVK 896

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVS 561
             E  K+ + LH M    + P A ++S
Sbjct: 897 CGEVKKIAK-LHNMMHITI-PCAGVIS 921



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 229/475 (48%), Gaps = 42/475 (8%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            +++++  +C+ G +      F  + +    P+  + N L+  L  +     A  ++  +
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G  P+V T + ++N  C+ G   +A++  +EM     E+      N VTY+++IDG 
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFEL------NVVTYNSLIDGC 263

Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGVQPS 276
              G +++A+ +   M +  I  + VT   LI G C      EA+++  EM   +G+   
Sbjct: 264 VSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLD 323

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
              + V++D  C+  KMD+A RL D M+  G+R N    N L++G+C  G+++ AE L  
Sbjct: 324 EYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLM 383

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M     + +  SY+ L++G+C+   V +A+S+Y EM+  GI+  VVT+N+L  GL  + 
Sbjct: 384 RMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVG 443

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             E AL ++  M + GV  D  +Y T +D L K G      E FR L +     DI A  
Sbjct: 444 AFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMG------EFFRALALWN---DILARG 494

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
                    GR  +A                  +N MI G C   +M +A + F  M+E 
Sbjct: 495 --------YGRSTYA------------------FNTMINGFCKMEKMIEAEETFNRMKEL 528

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              PD +T+  LI G+ ++    +  ++  KM+++ ++P   + + ++  L K++
Sbjct: 529 GFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSK 583



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 155/363 (42%), Gaps = 27/363 (7%)

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN--VIMDELC 288
           L  K  N  P+V ++  L+H L  A  ++E +    E+    V PS   ++  V+ +EL 
Sbjct: 83  LASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSLVVWNELV 138

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +              V    + +   ++ ++  +C  G I  A  +F +M  +GC     
Sbjct: 139 R--------------VFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLR 184

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           S N L++   +  E   A+ +Y  +   GI P V T + +     +   V  A+    EM
Sbjct: 185 SCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEM 244

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEA---VELFRTLRILKCELDIQAYNCLIDGLCKS 465
              G   +  TY + IDG    G +  A   ++L     IL+ ++ +     LI G C+ 
Sbjct: 245 DYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTL---TLLIKGYCRQ 301

Query: 466 GRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
            +L+ A ++   +     +V +   Y ++I G C   +MD A  L  +M       ++  
Sbjct: 302 CKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFI 361

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQE 584
            + LI+G+ +  + S+   LL +M +  + P++   S ++D   +  +  K++  +    
Sbjct: 362 CNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEML 421

Query: 585 RQG 587
           R G
Sbjct: 422 RVG 424


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 199/375 (53%), Gaps = 7/375 (1%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           +++I  L    ++  A  +F    A G    V  ++ LI+   R+G    A+++F  M  
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK- 295

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL-QMKDENINPDVVTYNSLIHGLC 253
              E G+  +PN VTY+ +ID   K G   K  A F  +M+   + PD +T+NSL+    
Sbjct: 296 ---EYGL--RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS 350

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
               W  A+ LF EM ++ ++  V ++N ++D +CK  +MD A  +L  M  + + PN  
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y+T++DGF   G+ + A  LFG M  +G   D VSYN L++ Y K    EEAL + REM
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
            S GIK  VVTYN L  G  +  + +   K+F EM+R+ V  +  TY+T IDG  K G  
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA+E+FR  +      D+  Y+ LID LCK+G +  A  L   +    + PNVVTYN +
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590

Query: 494 IQGLCNDGQMDKARD 508
           I        MD++ D
Sbjct: 591 IDAFGRSATMDRSAD 605



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 230/488 (47%), Gaps = 30/488 (6%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+   + G+V++    F       +      F++LI          EA ++F  +K +G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN++TYN +I+   + G     +  F +    NG      +P+ +T+++++    + G
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG-----VQPDRITFNSLLAVCSRGG 353

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             + A+ LF +M +  I  DV +YN+L+  +C     + A  +  +M  + + P+VV+++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K  + DEA  L   M   G+  +  +YNTL+  +  +G+   A ++   M S+
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G K D V+YN L+ GY K  + +E   ++ EM  + + P ++TY+TL  G  +    + A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           +++F E +  G+ AD   Y+  ID LCKNG +  AV L   +       ++  YN +ID 
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593

Query: 462 LCKSGRLKFAWELF--CSLPHGVLVPNVVTY---NIMIQGL--------------CNDGQ 502
             +S  +  + +     SLP      + +T    N +IQ                C +G 
Sbjct: 594 FGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGM 653

Query: 503 MDKA--RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
            + +   ++F  M +    P+V+TF  +++   R N     + LL +++    + D  + 
Sbjct: 654 QELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVY 709

Query: 561 SIVVDLLV 568
            +V  LL+
Sbjct: 710 GVVHGLLM 717



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL-HAESRI 147
           A G    +Y ++ LI+ + + G        F  +      PN  T+N++I          
Sbjct: 261 AGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEF 320

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
            + A  F +++  G +P+ IT+N+L+    R G    A NLF+EM N   E  V      
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDV------ 374

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            +Y+T++D +CK G +D A  +  QM  + I P+VV+Y+++I G   A  ++EA  LF E
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G+    V++N ++    K  + +EA  +L  M   G++ +  TYN L+ G+   GK
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
            +  +++F  M+      + ++Y+ LI+GY K    +EA+ ++RE  S G++  VV Y+ 
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           L   L +   V  A+ L DEM ++G++ +  TY + ID   ++ 
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 211/448 (47%), Gaps = 42/448 (9%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPN------LYTYNILINCFC 107
           FD M R    P  ++ FN LLA  ++   ++   N      N      +++YN L++  C
Sbjct: 327 FDEMQRNGVQPDRIT-FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           K G++ L F    ++      PN  +++++I G     R  EA  LF +++  G   + +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +YNTL++   + G +  AL++  EMA+    +G+  K + VTY+ ++ G  K+G  D+ K
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMAS----VGI--KKDVVTYNALLGGYGKQGKYDEVK 499

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
            +F +MK E++ P+++TY++LI G      + EA  +F E    G++  VV ++ ++D L
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL-------FGSMES 340
           CKN  +  A  L+D M + G+ PN  TYN+++D F     ++R+ +        F S   
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSAL 619

Query: 341 MGCKHDDVSYNILINGYC-------KNKEVEEA-------LSLYREMVSKGIKPTVVTYN 386
                 + +  I + G           K+ EE        L ++R+M    IKP VVT++
Sbjct: 620 SALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFS 679

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC---KNGYIIEAVELFRTL 443
            +       +  E A  L +E++      D + Y   + GL    +    ++A  LF  +
Sbjct: 680 AILNACSRCNSFEDASMLLEELR----LFDNKVYGV-VHGLLMGQRENVWLQAQSLFDKV 734

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFA 471
             +        YN L D L   G+ + A
Sbjct: 735 NEMDGSTASAFYNALTDMLWHFGQKRGA 762



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 173/356 (48%), Gaps = 1/356 (0%)

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           S +I  L + G V  AK +F           V  +++LI     +    EA  +F  M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 271 QGVQPSVVTFNVIMDELCKN-RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            G++P++VT+N ++D   K   +  + ++  D M + GV+P+  T+N+L+      G   
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  LF  M +   + D  SYN L++  CK  +++ A  +  +M  K I P VV+Y+T+ 
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +  + + AL LF EM+  G+A D  +Y T +    K G   EA+++ R +  +  +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+  YN L+ G  K G+     ++F  +    ++PN++TY+ +I G    G   +A ++
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           F + +      DV+ +  LI    +         L+ +M ++ + P+    + ++D
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 177/373 (47%), Gaps = 7/373 (1%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKAL--FLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           +C  +  TY  II  L      DKA     F   ++   N      +++I  L       
Sbjct: 193 LCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVT 250

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
            AKR+F      G   +V  F+ ++    ++   +EA  + + M + G+RPN  TYN ++
Sbjct: 251 IAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310

Query: 320 DGFCLMG--KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           D  C  G  +  +  + F  M+  G + D +++N L+    +    E A +L+ EM ++ 
Sbjct: 311 DA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           I+  V +YNTL   + +  Q++ A ++  +M    +  +  +Y+T IDG  K G   EA+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            LF  +R L   LD  +YN L+    K GR + A ++   +    +  +VVTYN ++ G 
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
              G+ D+ + +F +M+     P+++T+  LI G+ +     +  E+  + K   +  D 
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549

Query: 558 SIVSIVVDLLVKN 570
            + S ++D L KN
Sbjct: 550 VLYSALIDALCKN 562



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 145/301 (48%), Gaps = 1/301 (0%)

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           + ++  L +  K+  A R+ +     G       ++ L+  +   G    A  +F SM+ 
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 341 MGCKHDDVSYNILINGYCKNK-EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
            G + + V+YN +I+   K   E ++    + EM   G++P  +T+N+L          E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A  LFDEM    +  D  +Y T +D +CK G +  A E+   + + +   ++ +Y+ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
           DG  K+GR   A  LF  + +  +  + V+YN ++      G+ ++A D+  +M      
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
            DV+T++ L+ G+ +  +  +V ++  +MK + V+P+    S ++D   K  +  +++  
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536

Query: 580 F 580
           F
Sbjct: 537 F 537


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 209/399 (52%), Gaps = 12/399 (3%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           L  ++KA G  P ++T+ +LI  LC    T  AL +F +M      I +  KP+   Y+ 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQM------IDMKVKPDAFLYTV 54

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I  LCK   +D A + F QM      PD VTY  L+H L  A  W +  ++F EM+ +G
Sbjct: 55  VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 114

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             P +VT+  +++  CK  ++D+A  L+  +   G  P+   Y+TL+DG C   +   A 
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR 174

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
           ELF    + G   D + Y   I+G CK  +++EA +++ +M+  G  P  V+YN +   L
Sbjct: 175 ELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 232

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA-VELFRTLRILKCELD 451
            + ++V  A +L D+             T  +DGLCK+  + EA V L R L        
Sbjct: 233 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPS 292

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           +  Y+ +IDGLCK+ RL  A+ +   +     VP+VVTY  +I   C  G++D+AR+LF 
Sbjct: 293 VVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 352

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            M E   A DV+ +++LI G+ R    +KV+E +  ++E
Sbjct: 353 RMHERGCASDVVAYNILIRGYCR---AAKVDEAIAMIEE 388



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 207/398 (52%), Gaps = 18/398 (4%)

Query: 23  SNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NK 81
           +  +  +V F  L  +  ++N    N+A  IF  M+ M   P     + +++  L K NK
Sbjct: 8   AGITPTIVTFGSLIRKLCELNFT--NKALQIFHQMIDMKVKPDAFL-YTVVIGHLCKINK 64

Query: 82  -----HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
                 Y  ++  +G  P+  TY +L++   K  +   G   F  +L    +P   T+ +
Sbjct: 65  LDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 124

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           ++ G     RI +A +L  +LK  G  P+   Y+TLI+GLC+      A  LFE MA G+
Sbjct: 125 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-MAAGD 183

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            +       + + Y++ I GLCK G +D+AKA+ ++M +    PD V+YN +I+ LC  N
Sbjct: 184 VQ-------DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 236

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR-PNACTY 315
             +EAK L  + M++   P V    V++D LCK+R+++EA  +L+ M++ G R P+  TY
Sbjct: 237 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTY 296

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           + ++DG C   +++ A  +   M   GC  D V+Y  +I+ +CK   ++EA  L++ M  
Sbjct: 297 SAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 356

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           +G    VV YN L  G     +V+ A+ + +EM   G+
Sbjct: 357 RGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 200/387 (51%), Gaps = 11/387 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A G+ P + T+  LI   C++   +     F +++     P+A  +  +I  L   ++
Sbjct: 5   MKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 64

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKP 205
           +  AA+ F ++   GC P+ +TY  L++ L +         +FEEM + G+        P
Sbjct: 65  LDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS-------P 117

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             VTY+T+++G CK G +D+A +L  ++K    +P    Y++LI GLC  +   EA+ LF
Sbjct: 118 ELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF 177

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM    VQ  V+ +   +  LCK  K+DEA  +   M++ G  P+  +YN ++   C  
Sbjct: 178 -EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKD 235

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK-PTVVT 384
            +++ A+EL        C        +L++G CK++ VEEA  +   M+  G + P+VVT
Sbjct: 236 NRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVT 295

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y+ +  GL +  +++ A  +  +M+R G   D  TYT  ID  CK G + EA ELF+ + 
Sbjct: 296 YSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMH 355

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFA 471
              C  D+ AYN LI G C++ ++  A
Sbjct: 356 ERGCASDVVAYNILIRGYCRAAKVDEA 382



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 181/361 (50%), Gaps = 3/361 (0%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P  VT+ ++I  LC+  F +KA  +F QM D  + PD   Y  +I  LC  N  + A   
Sbjct: 12  PTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 71

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +M+  G  P  VT+ V++  L K  K ++  ++ + M+ +G  P   TY T+++G+C 
Sbjct: 72  FEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 131

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            G+I++A  L   ++  G       Y+ LI+G CK+   EEA  L+ EM +  ++  V+ 
Sbjct: 132 AGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMAAGDVQ-DVIV 189

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y +   GL +  +++ A  +  +M   G A D  +Y   I  LCK+  + EA EL     
Sbjct: 190 YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAM 249

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDGQM 503
             KC   +     L+DGLCKS R++ A  +    L  G   P+VVTY+ +I GLC   ++
Sbjct: 250 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRL 309

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           D A  +   M      PDV+T+  +I  F ++    +  EL  +M E+    D    +I+
Sbjct: 310 DDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNIL 369

Query: 564 V 564
           +
Sbjct: 370 I 370



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 154/293 (52%), Gaps = 5/293 (1%)

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL  M   G+ P   T+ +L+   C +   N+A ++F  M  M  K D   Y ++I   C
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K  +++ A S + +MV  G  P  VTY  L   LF+  + E   ++F+EM   G + +  
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T ++G CK G I +A+ L R L+          Y+ LIDGLCK  R + A ELF  +
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EM 179

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
             G  V +V+ Y   I GLC  G++D+A+ + + M E   APD ++++++I+   + N  
Sbjct: 180 AAGD-VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
           S+  EL+ +  E+K MP   + +++VD L K   S +   + ++ ER  E G+
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCK---SRRVEEACVILERMLEAGD 288


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/483 (31%), Positives = 238/483 (49%), Gaps = 43/483 (8%)

Query: 65  PPVSSFNILLAS---LAKNKHYDTRLNAT---GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   SF +++ +   + +    +  LNA    G   +  T  ++I+ FC+ G V+     
Sbjct: 222 PDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGY 281

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN   F +LI GL  +  I +A  L  ++   G +PNV T+ TLI+GLC+
Sbjct: 282 FWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK 341

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  A  LF ++   +G      KPN  TY+ +I+G CKE  +++A+ L  +M+++ +
Sbjct: 342 KGWTEKAFRLFLKLVRSDGY-----KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL 396

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  TY +LI G C   ++  A  L   M  +G  P++ T+N I+D LCK   +DEA R
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR 456

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ +   G++ +  TY  LM   C     NR+   F  M  +G   D  SY  LI+ +C
Sbjct: 457 LLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFC 516

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + K+++E+  L+ E VS G+ PT  TY ++  G         A+KLF  M   G A D+ 
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID-GL--CKSGRLKFAWELF 475
           TY   I GLCK   + +A  L               Y+ ++D GL  C+  RL  A+E +
Sbjct: 577 TYGALISGLCKESKLDDARNL---------------YDAMMDKGLSPCEVTRLTLAYE-Y 620

Query: 476 CSLPHGVLVPNVV----------TYNIMIQGLCNDGQMDKARDLF---LDMEENAAAPDV 522
           C         NV+          T N +++ LC++G++D A   F   LD E N     +
Sbjct: 621 CKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTL 680

Query: 523 ITF 525
           + F
Sbjct: 681 LGF 683



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 227/463 (49%), Gaps = 7/463 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  +  T N +++    +G V +    F  + +   +P+  +F  ++       R++EA
Sbjct: 184 GLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA 243

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                 +   G   +  T   +I+  C+ G+    +  F +M     E+G+   PN + +
Sbjct: 244 EKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV----EMGLA--PNVINF 297

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM- 269
           + +I+GLCK+G + +A  L  +M      P+V T+ +LI GLC      +A RLF++++ 
Sbjct: 298 TALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G +P+V T+  +++  CK  K++ A  LL  M ++G+ PN  TY TL+DG C +G   
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFV 417

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA EL   M   G   +  +YN +I+G CK   ++EA  L  ++   G++   VTY  L 
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                      +L  F++M + G   D  +YTT I   C+   + E+  LF     L   
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLI 537

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
              + Y  +I G C+ G    A +LF  + +    P+ +TY  +I GLC + ++D AR+L
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +  M +   +P  +T   L + + + ++ S    +L ++++++
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 196/407 (48%), Gaps = 7/407 (1%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F ++   G  P+ +++  ++   C  G  + A    E+  N   E G +    T T
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA----EKWLNAMVERGFIVDNATCT 263

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
              IID  C++G+V++    F +M +  + P+V+ + +LI+GLC      +A  L  EM+
Sbjct: 264 L--IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +G +P+V T   ++D LCK    ++A RL L L+   G +PN  TY  +++G+C   K+
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           NRAE L   M+  G   +  +Y  LI+G+CK      A  L   M  +G  P + TYN +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL +   ++ A +L +++   G+ AD  TYT  +   C+      ++  F  +  +  
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             DI +Y  LI   C+  ++K +  LF       L+P   TY  MI G C  G    A  
Sbjct: 502 TPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           LF  M  +  APD IT+  LI G  + ++      L   M +K + P
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 160/322 (49%), Gaps = 1/322 (0%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           EA  + +EM +QG+  S  T N ++D       ++ A  +   M QRGV P+  ++  ++
Sbjct: 172 EAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMV 231

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
              C MG++  AE+   +M   G   D+ +  ++I+ +C+   V   +  + +MV  G+ 
Sbjct: 232 VACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLA 291

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V+ +  L  GL +   ++ A +L +EM R G   +  T+TT IDGLCK G+  +A  L
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 440 F-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           F + +R    + ++  Y  +I+G CK  +L  A  L   +    LVPN  TY  +I G C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G   +A +L   M +   +P++ T++ +I G  +     +   LL+K+    +  D  
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGV 471

Query: 559 IVSIVVDLLVKNEISLKSLPSF 580
             +I++ +  +   + +SL  F
Sbjct: 472 TYTILMSVHCRQADTNRSLVFF 493



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 156/334 (46%), Gaps = 15/334 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF +F  ++R     P V ++  ++    K    +      +R+   GL PN  TY  L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK+G     +     + +  F+PN  T+N++I GL  +  + EA  L  K+   G 
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + + +TY  L++  CR   T  +L  F +M      + V   P+  +Y+T+I   C++  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKM------LKVGFTPDIHSYTTLISXFCRQKQ 520

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           + +++ LF +     + P   TY S+I G C   + + A +LF  M + G  P  +T+  
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LCK  K+D+A  L D M+ +G+ P   T  TL   +C     + A  +   +E   
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK-- 638

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            +    + N L+   C   +++ A   + +++ K
Sbjct: 639 -RQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 16/203 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY--DTRL----NATGLFPNLYTYNI 101
           N +   F+ ML++  +P  + S+  L++   + K      RL     + GL P   TY  
Sbjct: 487 NRSLVFFNKMLKVGFTPD-IHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I  +C+ G  SL    F R+      P++ T+ +LI GL  ES++ +A  L+  +   G
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P  +T  TL    C+   +  A+N+ + +           +    T +T++  LC EG
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---------RQWIRTVNTLVRKLCSEG 656

Query: 222 FVDKAKALFLQMKDENINPDVVT 244
            +D A   F ++ D+  N + VT
Sbjct: 657 KLDMAALFFHKLLDKEPNVNRVT 679



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 35/229 (15%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++  + +N +++EA+++  EM ++G+  +  T N +      +  VE A  +F EM + G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V+ D  ++   +   C  G ++EA +    +                             
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAM----------------------------- 250

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                +  G +V N  T  ++I   C  G +++    F  M E   AP+VI F  LI+G 
Sbjct: 251 -----VERGFIVDNA-TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGL 304

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            +     +  ELL +M  +   P+    + ++D L K   + K+   FL
Sbjct: 305 CKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFL 353



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/134 (19%), Positives = 64/134 (47%), Gaps = 3/134 (2%)

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           YI+ A  L     +   E   +   C++    ++G+LK A  +   + +  LV +  T N
Sbjct: 137 YIVSATALIGNKNL---ERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLN 193

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++      G ++ A ++F++M +   +PD ++F +++     +    +  + L+ M E+
Sbjct: 194 CVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVER 253

Query: 552 KVMPDASIVSIVVD 565
             + D +  ++++D
Sbjct: 254 GFIVDNATCTLIID 267


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 267/553 (48%), Gaps = 70/553 (12%)

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA---ESRIMEAAALFTKLKAFG--- 161
           K G   LG ++F  ++ +    N+  F SL + LH    E+R+    +     KA+G   
Sbjct: 57  KWGSYKLGDLSFYSLIEN--FSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAH 114

Query: 162 -----------------CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
                            C+  V ++NT++N + + G   +AL  +  + + N    +  +
Sbjct: 115 LPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNI--Q 172

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN ++++ +I  LC+ G VD+A  +F  M D N   D  TY++L+HGLC+    +EA  L
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
             EM  +G  P+ V FNV++  LCK   +  AS+L+D M  +G  PN  TYN+L+ G CL
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            GK+++A  L   M +  C  +D+++  L++G+ K+    + + +   +  KG +    +
Sbjct: 293 KGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS 352

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG-------YIIE-- 435
           Y++L  GLF+  + EH ++L+ EM   G   +T  Y+  IDGLC+ G       Y+IE  
Sbjct: 353 YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMK 412

Query: 436 --------------------------AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
                                     A+ +++ +    C      Y+ LI+GLCK+G+LK
Sbjct: 413 NKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLK 472

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM--EENAAAPDVITFDM 527
            A  ++  +    +  +VV Y+ MI G CN   +++   LF  M        PDV+T+++
Sbjct: 473 EALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNI 532

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ---- 583
           L++ F   N  S+  ++L+ M ++   PD     I +  L  N    +    FL +    
Sbjct: 533 LLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVR 592

Query: 584 --ERQGEVGESNV 594
             +RQ  VG SN+
Sbjct: 593 LIKRQRTVGASNI 605



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 243/481 (50%), Gaps = 22/481 (4%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSC----FTPNAATFNSLIKGLHAESRIMEAAAL 153
           ++N ++N   + G   L    +  ++ S       PN  +FN +IK L     + +A  +
Sbjct: 138 SFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEV 197

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
           F  +    C  +  TY+TL++GLC  G    A++L +EM    G       PN V ++ +
Sbjct: 198 FRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVEGTF-----PNPVAFNVL 251

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I  LCK+G + +A  L   M  +   P+ VTYNSL+HGLC     ++A  L   M+    
Sbjct: 252 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 311

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P+ +TF  ++D   K+ +  +  R+L  + ++G R N  +Y++L+ G    GK     +
Sbjct: 312 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 371

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L+  M   GCK + + Y+ LI+G C+  + +EA     EM +KG  P   TY++L  G F
Sbjct: 372 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF 431

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           E   +  A+ ++ EM  +        Y+  I+GLCKNG + EA+ +++ +     +LD+ 
Sbjct: 432 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVV 491

Query: 454 AYNCLIDGLCKSGRLKFAWELF----CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
           AY+ +I G C +  ++   +LF    C  P   L P+VVTYNI++   C    + +A D+
Sbjct: 492 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK--LQPDVVTYNILLNAFCTKNSVSRAIDI 549

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSK-----VNELLHKM-KEKKVMPDASIVSIV 563
              M +    PD IT D+ +       +P +     ++EL+ ++ K ++ +  ++I+ ++
Sbjct: 550 LNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVM 609

Query: 564 V 564
           +
Sbjct: 610 L 610



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 220/453 (48%), Gaps = 55/453 (12%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL----------NATGLFPNL 96
           P +A  +F  M         V SFN +L  + +   +D  L          + + + PN 
Sbjct: 116 PQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNG 175

Query: 97  YTYNILINCFCKIGRVSLGFIAF-GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
            ++N++I   C++G V      F G   R+C   +  T+++L+ GL  E RI EA +L  
Sbjct: 176 LSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVA-DGYTYSTLMHGLCNEGRIDEAVSLLD 234

Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           +++  G  PN + +N LI+ LC+ G    A  L + M          C PN VTY++++ 
Sbjct: 235 EMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKG------CVPNEVTYNSLVH 288

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVT------------------------------- 244
           GLC +G +DKA +L  +M      P+ +T                               
Sbjct: 289 GLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRG 348

Query: 245 ----YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
               Y+SLI GL          +L+ EM+++G +P+ + ++ ++D LC+  K DEA   L
Sbjct: 349 NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYL 408

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  +G  PN+ TY++LM G+   G I++A  ++  M    C H +V Y+ILING CKN
Sbjct: 409 IEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKN 468

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTR 418
            +++EAL ++++M+S+GIK  VV Y+++  G      VE  +KLF++M      +  D  
Sbjct: 469 GKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVV 528

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           TY   ++  C    +  A+++  T+    C+ D
Sbjct: 529 TYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 181/346 (52%), Gaps = 17/346 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-------NKHYDTRLNATGLFPNLYTYN 100
           +EA  + D M      P PV+ FN+L+++L K       +K  D      G  PN  TYN
Sbjct: 227 DEAVSLLDEMQVEGTFPNPVA-FNVLISALCKKGDLSRASKLVDNMF-LKGCVPNEVTYN 284

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            L++  C  G++        R++ +   PN  TF +L+ G     R ++   +   L+  
Sbjct: 285 SLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   N  +Y++LI+GL + G     + L++EM     E G  CKPNT+ YS +IDGLC+E
Sbjct: 345 GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMV----EKG--CKPNTIVYSALIDGLCRE 398

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G  D+AK   ++MK++   P+  TY+SL+ G   A D ++A  ++ EM D       V +
Sbjct: 399 GKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCY 458

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
           +++++ LCKN K+ EA  +   M+ RG++ +   Y++++ GFC    + +  +LF  M  
Sbjct: 459 SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLC 518

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            +   + D V+YNIL+N +C    V  A+ +   M+ +G  P  +T
Sbjct: 519 HNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 9/297 (3%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ A    PN  T+  L++ F K GR   G      +    +  N  +++SLI GL  E 
Sbjct: 305 RMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEG 364

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +      L+ ++   GC+PN I Y+ LI+GLCR G    A     EM N          P
Sbjct: 365 KGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH------TP 418

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N+ TYS+++ G  + G + KA  ++ +M D + N   V Y+ LI+GLC      EA  ++
Sbjct: 419 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 478

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV--QRGVRPNACTYNTLMDGFC 323
            +M+ +G++  VV ++ ++   C  + +++  +L + M+     ++P+  TYN L++ FC
Sbjct: 479 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 538

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE-VEEALSLYREMVSKGIK 379
               ++RA ++  +M   GC  D ++ +I +     N +  ++      E+V + IK
Sbjct: 539 TKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIK 595


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/483 (31%), Positives = 238/483 (49%), Gaps = 43/483 (8%)

Query: 65  PPVSSFNILLAS---LAKNKHYDTRLNAT---GLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   SF +++ +   + +    +  LNA    G   +  T  ++I+ FC+ G V+     
Sbjct: 222 PDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGY 281

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F +++     PN   F +LI GL  +  I +A  L  ++   G +PNV T+ TLI+GLC+
Sbjct: 282 FWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK 341

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G T  A  LF ++   +G      KPN  TY+ +I+G CKE  +++A+ L  +M+++ +
Sbjct: 342 KGWTEKAFRLFLKLVRSDGY-----KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL 396

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P+  TY +LI G C   ++  A  L   M  +G  P++ T+N I+D LCK   +DEA R
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR 456

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LL+ +   G++ +  TY  LM   C     NR+   F  M  +G   D  SY  LI+ +C
Sbjct: 457 LLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFC 516

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           + K+++E+  L+ E VS G+ PT  TY ++  G         A+KLF  M   G A D+ 
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID-GL--CKSGRLKFAWELF 475
           TY   I GLCK   + +A  L               Y+ ++D GL  C+  RL  A+E +
Sbjct: 577 TYGALISGLCKESKLDDARNL---------------YDAMMDKGLSPCEVTRLTLAYE-Y 620

Query: 476 CSLPHGVLVPNVV----------TYNIMIQGLCNDGQMDKARDLF---LDMEENAAAPDV 522
           C         NV+          T N +++ LC++G++D A   F   LD E N     +
Sbjct: 621 CKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTL 680

Query: 523 ITF 525
           + F
Sbjct: 681 LGF 683



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 228/463 (49%), Gaps = 7/463 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL P+  T N +++    +G V +    F  + +   +P+  +F  ++       R++EA
Sbjct: 184 GLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA 243

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
                 +   G   +  T   +I+  C+ G+    +  F +M     E+G+   PN + +
Sbjct: 244 ERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV----EMGLA--PNVINF 297

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM- 269
           + +I+GLCK+G + +A  L  +M      P+V T+ +LI GLC      +A RLF++++ 
Sbjct: 298 TALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G +P+V T+  +++  CK  K++ A  LL  M ++G+ PN  TY TL+DG C +G   
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFV 417

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           RA EL   M   G   +  +YN +I+G CK   ++EA  L  ++   G++   VTY  L 
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
                      +L  F++M + G   D  +YTT I   C+   + E+  LF     L   
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLI 537

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
              + Y  +I G C+ G    A +LF  + +    P+ +TY  +I GLC + ++D AR+L
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           +  M +   +P  +T   L + + + ++ S    +L ++++++
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 202/430 (46%), Gaps = 7/430 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             P+  T N ++        +  A  +F ++   G  P+ +++  ++   C  G  + A 
Sbjct: 185 LVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA- 243

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
              E   N   E G +    T T   IID  C++G+V++    F +M +  + P+V+ + 
Sbjct: 244 ---ERWLNAMVERGFIVDNATCTL--IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQ 305
           +LI+GLC      +A  L  EM+ +G +P+V T   ++D LCK    ++A RL L L+  
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRS 358

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G +PN  TY  +++G+C   K+NRAE L   M+  G   +  +Y  LI+G+CK      
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVR 418

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A  L   M  +G  P + TYN +  GL +   ++ A +L +++   G+ AD  TYT  + 
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
             C+      ++  F  +  +    DI +Y  LI   C+  ++K +  LF       L+P
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIP 538

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
              TY  MI G C  G    A  LF  M  +  APD IT+  LI G  + ++      L 
Sbjct: 539 TKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLY 598

Query: 546 HKMKEKKVMP 555
             M +K + P
Sbjct: 599 DAMMDKGLSP 608



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 160/322 (49%), Gaps = 1/322 (0%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           EA  + +EM +QG+ PS  T N ++D       ++ A  +   M QRGV P+  ++  ++
Sbjct: 172 EAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMV 231

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
              C MG++  AE    +M   G   D+ +  ++I+ +C+   V   +  + +MV  G+ 
Sbjct: 232 VACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLA 291

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V+ +  L  GL +   ++ A +L +EM R G   +  T+TT IDGLCK G+  +A  L
Sbjct: 292 PNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 440 F-RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           F + +R    + ++  Y  +I+G CK  +L  A  L   +    LVPN  TY  +I G C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G   +A +L   M +   +P++ T++ +I G  +     +   LL+K+    +  D  
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGV 471

Query: 559 IVSIVVDLLVKNEISLKSLPSF 580
             +I++ +  +   + +SL  F
Sbjct: 472 TYTILMSVHCRQADTNRSLVFF 493



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 156/334 (46%), Gaps = 15/334 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF +F  ++R     P V ++  ++    K    +      +R+   GL PN  TY  L
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+  CK+G     +     + +  F+PN  T+N++I GL  +  + EA  L  K+   G 
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + + +TY  L++  CR   T  +L  F +M      + V   P+  +Y+T+I   C++  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKM------LKVGFTPDIHSYTTLISTFCRQKQ 520

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           + +++ LF +     + P   TY S+I G C   + + A +LF  M + G  P  +T+  
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++  LCK  K+D+A  L D M+ +G+ P   T  TL   +C     + A  +   +E   
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK-- 638

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            +    + N L+   C   +++ A   + +++ K
Sbjct: 639 -RQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHY--DTRL----NATGLFPNLYTYNI 101
           N +   F+ ML++  +P  + S+  L+++  + K      RL     + GL P   TY  
Sbjct: 487 NRSLVFFNKMLKVGFTPD-IHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I  +C+ G  SL    F R+      P++ T+ +LI GL  ES++ +A  L+  +   G
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P  +T  TL    C+   +  A+N+ + +           +    T +T++  LC EG
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---------RQWIRTVNTLVRKLCSEG 656

Query: 222 FVDKAKALFLQMKDENINPDVVT 244
            +D A   F ++ D+  N + VT
Sbjct: 657 KLDMAALFFHKLLDKEPNVNRVT 679



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 35/229 (15%)

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           ++  + +N +++EA+++  EM ++G+ P+  T N +      +  VE A  +F EM + G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V+ D  ++   +   C  G ++EA      +                             
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAM----------------------------- 250

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
                +  G +V N  T  ++I   C  G +++    F  M E   AP+VI F  LI+G 
Sbjct: 251 -----VERGFIVDNA-TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGL 304

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
            +     +  ELL +M  +   P+    + ++D L K   + K+   FL
Sbjct: 305 CKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFL 353



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/134 (20%), Positives = 65/134 (48%), Gaps = 3/134 (2%)

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
           YI+ A  L     + +    +Q   C++    ++G+LK A  +   + +  LVP+  T N
Sbjct: 137 YIVSATALIGNKNLERANEVMQ---CMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLN 193

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++      G ++ A ++F++M +   +PD ++F +++     +    +    L+ M E+
Sbjct: 194 CVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVER 253

Query: 552 KVMPDASIVSIVVD 565
             + D +  ++++D
Sbjct: 254 GFIVDNATCTLIID 267


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 240/480 (50%), Gaps = 23/480 (4%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           ++ ++  +C++  V      F  +    F P   T N ++  L   +RI  A   +  + 
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTII 214
               + NV T+N +IN LC+ G          ++    G +G++     KP  VTY+T++
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEG----------KLKKAKGFLGIMESFGIKPTIVTYNTLV 268

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G    G ++ A+ +  +MK +   PD+ TYN ++  +C+    +E  R   EM   G+ 
Sbjct: 269 QGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLR---EMKGIGLV 325

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P  V++N+++     N  ++ A    D MV++G+ P   TYNTL+ G  +  KI  AE L
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              +   G   D V+YNI+INGYC++ + ++A +L+ EM++ GIKPT  TY +L   L  
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCR 445

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            ++   A +LF+++   G+  D     T +DG C  G +  A  L + +  +  + D   
Sbjct: 446 RNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVT 505

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA---RDLFL 511
           YNCL+ GLC  G+ + A EL   +    + P+ ++YN +I G    G    A   RD  L
Sbjct: 506 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEML 565

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +  N   P ++T++ L+ G  +  +     ELL +MK + ++P+ S    V++ + K++
Sbjct: 566 SLGFN---PTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSD 622



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 190/376 (50%), Gaps = 23/376 (6%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N L+   +     +      + + + G  P+L TYN +++  C  GR S     
Sbjct: 259 PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRAS----- 313

Query: 119 FGRILRSC----FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
              +LR        P++ ++N LI+G      +  A A   ++   G  P   TYNTLI+
Sbjct: 314 --EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIH 371

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
           GL        A  L  E+     E G+V   ++VTY+ +I+G C+ G   KA AL  +M 
Sbjct: 372 GLFMENKIEAAEILIREIR----EKGIVL--DSVTYNIVINGYCQHGDAKKAFALHDEMM 425

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
            + I P   TY SLI+ LC  N   EA  LF +++ +G++P +V  N +MD  C    MD
Sbjct: 426 TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  LL  M +  + P+  TYN LM G C  GK   A EL G M+  G K D +SYN LI
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
           +GY K  + + A  +  EM+S G  PT++TYN L  GL +    E A +L  EM+ +G+ 
Sbjct: 546 SGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIV 605

Query: 415 ADTRTYTTFIDGLCKN 430
            +  ++ + I+ + K+
Sbjct: 606 PNDSSFCSVIEAMSKS 621



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 224/473 (47%), Gaps = 19/473 (4%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRV 112
           +FD+M+R +     V    I    L K K +D         P   T N +++   ++ R+
Sbjct: 158 LFDFMVRFYCQLRMVDE-AIECFYLMKEKGFD---------PKTETCNHILSLLSRLNRI 207

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
              ++ +  + R     N  TFN +I  L  E ++ +A      +++FG +P ++TYNTL
Sbjct: 208 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTL 267

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           + G    G    A  +  EM +         +P+  TY+ I+  +C EG   +A  +  +
Sbjct: 268 VQGYSLRGRIEGARMIISEMKSKG------FQPDLQTYNPILSWMCNEG---RASEVLRE 318

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           MK   + PD V+YN LI G  +  D   A     EM+ QG+ P+  T+N ++  L    K
Sbjct: 319 MKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 378

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           ++ A  L+  + ++G+  ++ TYN +++G+C  G   +A  L   M + G K    +Y  
Sbjct: 379 IEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTS 438

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI   C+  +  EA  L+ ++V KG+KP +V  NTL  G      ++ A  L  EM R  
Sbjct: 439 LIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMN 498

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +  D  TY   + GLC  G   EA EL   ++    + D  +YN LI G  K G  K A+
Sbjct: 499 IDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 558

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
            +   +      P ++TYN +++GL  +   + A +L  +M+     P+  +F
Sbjct: 559 IVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSF 611



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 193/402 (48%), Gaps = 35/402 (8%)

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +LF+E+   +  +      +T+ +  ++   C+   VD+A   F  MK++  +P   T N
Sbjct: 139 DLFDELVLAHDRLQT---KSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCN 195

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            ++  L   N    A   + +M    ++ +V TFN++++ LCK  K+ +A   L +M   
Sbjct: 196 HILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESF 255

Query: 307 GVRPNACTYNTLMDGFCLMGKI--------------------------------NRAEEL 334
           G++P   TYNTL+ G+ L G+I                                 RA E+
Sbjct: 256 GIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEV 315

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M+ +G   D VSYNILI G   N ++E A +   EMV +G+ PT  TYNTL  GLF 
Sbjct: 316 LREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
            +++E A  L  E++  G+  D+ TY   I+G C++G   +A  L   +     +     
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFT 435

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y  LI  LC+  + + A ELF  +    + P++V  N ++ G C  G MD+A  L  +M+
Sbjct: 436 YTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMD 495

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
                PD +T++ L+ G     +  +  EL+ +MK + + PD
Sbjct: 496 RMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 537



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 11/214 (5%)

Query: 49  EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYDT---RLNATGLFPNLYTYNILI 103
           +AF + D M+   + P+    +S   +L    K +  D    ++   G+ P+L   N L+
Sbjct: 416 KAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLM 475

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  C  G +   F     + R    P+  T+N L++GL  E +  EA  L  ++K  G +
Sbjct: 476 DGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 535

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+ I+YNTLI+G  + G T  A  + +EM      + +   P  +TY+ ++ GL K    
Sbjct: 536 PDHISYNTLISGYSKKGDTKHAFIVRDEM------LSLGFNPTLLTYNALLKGLSKNQDG 589

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
           + A+ L  +MK E I P+  ++ S+I  +  +++
Sbjct: 590 ELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 227/438 (51%), Gaps = 18/438 (4%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ TY  LI+ +C+ GR++    A   I      P+  T+N+++KGL    +  EA  L 
Sbjct: 186 NVVTYTALIDGYCRSGRLT---DALRLIASMPVAPDTYTYNTVLKGLCFAKQWEEAEELM 242

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++    C PN +T+ T I   C+ G    A+ L E+M          C P+ V YST++
Sbjct: 243 REMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG------CMPDVVIYSTLV 296

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           +G  + G VD A  L   M      P+ V YN+ + GLC A  W+E   L  EM+ +   
Sbjct: 297 NGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCP 353

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           P+  TF+ +++ LC+NR  + A  +L+ M + G  P+  +YNT++  F      + A +L
Sbjct: 354 PNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKL 413

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              + SM CK D +S+N ++   C+ +   +A  L  +M+ +      +T+N L   L +
Sbjct: 414 ---LNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQ 470

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             QV+ A+++F+ M +     D  TY++ I+G  + G    A +LFR++    C  DI +
Sbjct: 471 NGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRADIFS 527

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN  + GLC + R   A EL   +     +PN VT+NI+I  LC  G +++A +++  M 
Sbjct: 528 YNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMP 587

Query: 515 ENAAAPDVITFDMLIHGF 532
           +    PD+ T++ LI+G+
Sbjct: 588 KYGITPDIFTYNALINGY 605



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 220/492 (44%), Gaps = 78/492 (15%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P   T N LIK L A  R+ +A  +   LK  G   + +++NTL+ G CR G    A  +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
            E  A  +G        N VTY+ +IDG C+ G +  A  L   M    + PD  TYN++
Sbjct: 176 LEA-ARASG------AANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTV 225

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG- 307
           + GLC A  W EA+ L  EM+     P+ VTF   +   C+N  +D A  LL+ M + G 
Sbjct: 226 LKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGC 285

Query: 308 -------------------------------VRPNACTYNTLMDGFCLMGKINRAEELFG 336
                                           RPN   YN  + G C+ G+ +   EL  
Sbjct: 286 MPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIA 345

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M    C  +D +++ LIN  C+N+  E A+ +  +M   G  P VV+YNT+     E  
Sbjct: 346 EMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQA 405

Query: 397 QVEHALKLFD--------------------------------EMQRDGVAADTRTYTTFI 424
             + ALKL +                                +M ++    +  T+   I
Sbjct: 406 CADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILI 465

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
           D LC+NG + +A+E+F  +   +C  DI  Y+ LI+G  + G  K A++LF S+P     
Sbjct: 466 DSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA-- 523

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
            ++ +YN  ++GLC   + D A +L  DM      P+ +TF++LI+   +    ++  E+
Sbjct: 524 -DIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEV 582

Query: 545 LHKMKEKKVMPD 556
             +M +  + PD
Sbjct: 583 YEQMPKYGITPD 594



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 205/405 (50%), Gaps = 18/405 (4%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++  Y+ L+N F + GRV         +L     PN   +N+ +KGL    R  E 
Sbjct: 284 GCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEV 340

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  ++    C PN  T++TLIN LC+      A+ + E+M     + G +  P+ V+Y
Sbjct: 341 GELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQ----KYGYM--PDVVSY 394

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           +TII    ++   D A  L   M      PD +++N+++  LC A  W +A  L  +M+ 
Sbjct: 395 NTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLK 451

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +    + +TFN+++D LC+N ++ +A  + +LM +    P+  TY++L++GF   G    
Sbjct: 452 EDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKV 511

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A +LF    SM C+ D  SYN  + G C     ++A  L  +MV+K   P  VT+N L  
Sbjct: 512 AFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILIN 568

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
            L +   V  A++++++M + G+  D  TY   I+G  + G + +A++   T   + CE 
Sbjct: 569 SLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLST---MPCEP 625

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           D  +YN ++ GLC++ R K A +L   +      PN VT+    Q
Sbjct: 626 DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQ 670


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 231/444 (52%), Gaps = 18/444 (4%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
            P+  T+N+++KGL    +  +A  L  ++    C PN +T+ T I   C+ G    A+ 
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L E+M          C P+ + YST+++G  + G VD+A  L   M      P+ V YN+
Sbjct: 64  LLEQMPKYG------CTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNA 114

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            + GLC A  W E   L  EM+ +   P+  TF+ +++ LC+NR ++ A  +L+ M + G
Sbjct: 115 ALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYG 174

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+  +YNT++  F       RA++    ++SM CK D +S+N ++   CK K   +A+
Sbjct: 175 YMPDVVSYNTIISCF---SDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAV 231

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L  +M+ K  +   +T+N L   L +  QV+ A+++F+ M +     D  TY++ I+G 
Sbjct: 232 ELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF 291

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            + G    A +LFR++    C  DI +YN  + GLC + R   A EL   +     +PN 
Sbjct: 292 SEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNE 348

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VT+NI+I  LC  G +++A D++  M +    PD+ T++ LI+G+   +E  ++++ L  
Sbjct: 349 VTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGY---SEQGRLDDALKF 405

Query: 548 MKEKKVMPDASIVSIVVDLLVKNE 571
           +      PD    + ++  L + E
Sbjct: 406 LSTMPCEPDTISYNSILKGLCRAE 429



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 219/476 (46%), Gaps = 18/476 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ YTYN ++   C   +          ++R+   PN  TF + I+       +  A  L
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++  +GC P+VI Y+TL+NG    G    AL L   M         +C+PNTV Y+  
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---------LCRPNTVCYNAA 115

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC  G  ++   L  +M  ++  P+  T+++LI+ LC       A  +  +M   G 
Sbjct: 116 LKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGY 175

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P VV++N I+       + D+A +LL  M+    +P+  ++N ++   C   +   A E
Sbjct: 176 MPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVE 232

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M    C+ +++++NILI+  C+N +V++A+ ++  M      P +VTY++L  G  
Sbjct: 233 LVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFS 292

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           E    E A  LF  M      AD  +Y   + GLC      +A EL   +    C  +  
Sbjct: 293 EQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEV 349

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LI  LC+ G +  A +++  +P   + P++ TYN +I G    G++D A      M
Sbjct: 350 TFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM 409

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
                 PD I+++ ++ G  R        +L+ +M  K   P+         L +K
Sbjct: 410 ---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 462



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 213/467 (45%), Gaps = 53/467 (11%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P  P   ++N +L  L   K ++        +      PN  T+   I  FC+ G +   
Sbjct: 2   PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRA 61

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++ +   TP+   +++L+ G     R+ EA  L   L    C PN + YN  + G
Sbjct: 62  VELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNAALKG 118

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC  G       L  EM   +      C PN  T+ST+I+ LC+   V+ A  +  QM+ 
Sbjct: 119 LCIAGRWEEVGELIAEMVRKD------CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 172

Query: 236 ENINPDVVTYNSLI--------------------------------HGLCHANDWNEAKR 263
               PDVV+YN++I                                  LC A  W +A  
Sbjct: 173 YGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVE 232

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L  +M+ +  + + +TFN+++D LC+N ++ +A  + +LM +    P+  TY++L++GF 
Sbjct: 233 LVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFS 292

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G    A +LF    SM C+ D  SYN  + G C     ++A  L  +MV++   P  V
Sbjct: 293 EQGLDEMAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEV 349

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+N L   L +   V  A+ ++++M + G+  D  TY   I+G  + G + +A++   T 
Sbjct: 350 TFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLST- 408

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             + CE D  +YN ++ GLC++ R K A +L   +      PN VT+
Sbjct: 409 --MPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 6/295 (2%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PD  TYN+++ GLC A  W +A+ L  EM+     P+ VTF   +   C+N  +D A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL+ M + G  P+   Y+TL++GF   G+++ A +L   + +M C+ + V YN  + G 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNAALKGL 119

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C     EE   L  EMV K   P   T++TL   L +   VE+A+++ ++MQ+ G   D 
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            +Y T I          +A++L +++    C+ D  ++N ++  LCK+ R   A EL   
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           +       N +T+NI+I  LC +GQ+  A ++F  M +    PD++T+  LI+GF
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF 291



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + P+  TYN +++GLC   Q ++A +L  +M  N+  P+ +TF   I  F +     +  
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 543 ELLHKMKEKKVMPDASIVSIVVD 565
           ELL +M +    PD  I S +V+
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVN 85


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 222/464 (47%), Gaps = 45/464 (9%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
            P+ + FNSL+  L     +     LFT ++    +P+V+TY  L+NGLC++GH   AL 
Sbjct: 128 APDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALK 187

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN---PDVVT 244
           + + M++   +   VC P+    +T++DGLCK G + +A  +F+  +  +++   P+ VT
Sbjct: 188 VLDRMSSPGSD---VC-PDIAILNTVVDGLCKIGRLQQA-IIFVDERMRHVHGCAPNAVT 242

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM----------- 293
           YN L    C   D   A ++   M  +GV P+V+T N I+  LC+  ++           
Sbjct: 243 YNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKR 302

Query: 294 --------------------------DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
                                     D A  L   M   G RP+A  Y T++ G    G+
Sbjct: 303 TVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGR 362

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  A     SM+  G K D  +YNILI G+C+ K++ EA  L  EM   G++P V TYNT
Sbjct: 363 LLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           L  GL +        +L   M  DG      T+ T + G CK G   EA+ +FR++   +
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
            + +   YN LID LCKS  +  A +LF  +    +  NV TYN +++GL +    +KA 
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAF 542

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           +L   M E    P+ +T D+L+     I E  ++   + +  +K
Sbjct: 543 ELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQRDQK 586



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/471 (32%), Positives = 224/471 (47%), Gaps = 27/471 (5%)

Query: 12  SFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFN 71
           S AS   +   S F+SLL        R G++  +T      +F  M R     P V ++ 
Sbjct: 121 SLASGAPAPDISIFNSLLTAL----GRAGNLRGMTE-----LFTSM-RDASVKPDVVTYG 170

Query: 72  ILLASLAKNKHYDT------RLNATG--LFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           ILL  L K+ H         R+++ G  + P++   N +++  CKIGR+    I     +
Sbjct: 171 ILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERM 230

Query: 124 RSCF--TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           R      PNA T+N L         I  A  +  +++  G  PNVIT NT+I GLCR G 
Sbjct: 231 RHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGR 290

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              AL  F E      E     + N VTYST+         VD A  LF +M D    PD
Sbjct: 291 VGAALEFFREKRTVWPE----ARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPD 346

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            V Y ++I GL  A    +A      M   G +     +N+++   C+ +K+ EA  LL+
Sbjct: 347 AVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLE 406

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G++P+  TYNTL+ G C  G  +  +EL G M   GC+   V++  L++GYCK  
Sbjct: 407 EMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAG 466

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           + +EAL ++R M    I+P  V YNTL   L +  +V+ A+KLFDEM+   V A+  TY 
Sbjct: 467 KTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYN 526

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG---RLK 469
             + GL       +A EL   +R  +C  +    + L++ L + G   RLK
Sbjct: 527 ALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLK 577



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 189/373 (50%), Gaps = 6/373 (1%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+   +++++  L + G +     LF  M+D ++ PDVVTY  L++GLC +    +A ++
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 265 FIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR--GVRPNACTYNTLMD 320
              M   G  V P +   N ++D LCK  ++ +A   +D  ++   G  PNA TYN L D
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVSKGI 378
            FC +G I  A ++   ME  G   + ++ N +I G C+   V  AL  +RE   V    
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEA 308

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +   VTY+TL       + V+ A++LF EM   G   D   Y T I GL + G +++A  
Sbjct: 309 RGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACT 368

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
              +++    +LD +AYN LI G C+  +L  A+EL   +    L P+V TYN ++ GLC
Sbjct: 369 TAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLC 428

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G      +L   M ++   P V+TF  L+HG+ +  +  +   +   M E ++ P+  
Sbjct: 429 KAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTV 488

Query: 559 IVSIVVDLLVKNE 571
           I + ++D L K+ 
Sbjct: 489 IYNTLIDFLCKSR 501



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 217/456 (47%), Gaps = 16/456 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHTMIALN 187
           P+A   + L++   + +   EAA       A G   P++  +N+L+  L R G+      
Sbjct: 96  PSALLLSKLVRRFSSPA---EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTE 152

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD--ENINPDVVTY 245
           LF  M + +       KP+ VTY  +++GLCK G V  A  +  +M     ++ PD+   
Sbjct: 153 LFTSMRDAS------VKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAIL 206

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQ--GVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           N+++ GLC      +A     E M    G  P+ VT+N + D  C+   +  A +++  M
Sbjct: 207 NTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARM 266

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG--CKHDDVSYNILINGYCKNK 361
            + GV PN  T NT++ G C +G++  A E F    ++    + + V+Y+ L + +    
Sbjct: 267 EKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCN 326

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V+ A+ L+ EM   G +P  V Y T+  GL +  ++  A      M++ G   D + Y 
Sbjct: 327 NVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYN 386

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
             I G C+   + EA EL   ++ +  + D+  YN L+ GLCK+G      EL   +   
Sbjct: 387 ILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDD 446

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
              P+VVT+  ++ G C  G+ D+A  +F  M+E    P+ + ++ LI    +  E    
Sbjct: 447 GCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVA 506

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            +L  +M+EK V  + +  + ++  L   +++ K+ 
Sbjct: 507 IKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAF 542


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 256/528 (48%), Gaps = 20/528 (3%)

Query: 68  SSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLG-FIAFGRILRSC 126
           +SF++LL  L  +     RL   GL P+  + N +++      R+ L   IA   + R  
Sbjct: 201 ASFDLLLLCLP-SAELLRRLRQYGLSPSPESCNAVLS------RLPLDEAIA---LFREL 250

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
              N  + N L+K L +  R+ +A   F ++ +    P+V+TY T+++G C  G    A+
Sbjct: 251 PDKNVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAV 307

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L +EMA    E       N   Y+++I  LC +G V  A  +   M    +  D V + 
Sbjct: 308 KLLDEMAAKGLE------SNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFT 361

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           ++I G C   D   A+RLF EM  +G+    VT   +++ LC+  ++ EA R+L  MV +
Sbjct: 362 TVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDK 421

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+  +  TY  L+DG+C  G +  A  +   M       + V+Y  L +G CK  +V  A
Sbjct: 422 GLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAA 481

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L  EM +KG++  V TYN+L  GL +   +E A+++  EM+  G   D  TYTT ID 
Sbjct: 482 NELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDT 541

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK+G    A  + + +     +  I  YN L++G C SGR++   +L   +    + PN
Sbjct: 542 LCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           VVTYN +++  C D  M    +++  M     AP+  T+++LI G  +     +      
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQ 661

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           +M EK +   AS  S ++ LL K +   ++   F     +G   E +V
Sbjct: 662 EMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 245/524 (46%), Gaps = 22/524 (4%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF-----PNLYTYNILINCFCKIGRV 112
           LR +   P   S N +L+ L  ++       A  LF      N+ ++NIL+      GR+
Sbjct: 219 LRQYGLSPSPESCNAVLSRLPLDE-------AIALFRELPDKNVCSHNILLKALLSAGRL 271

Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
                 F  +      P+  T+ +++ G      +  A  L  ++ A G E N   Y ++
Sbjct: 272 KDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSV 328

Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
           I  LC  G    AL + E+M       GV    + V ++T+I G C +G +  A+ LF +
Sbjct: 329 IALLCNKGQVSDALRVLEDMTMH----GVAL--DAVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M+   +  D VT+ +LI+GLC A +  EA R+  EM+D+G+   VVT+ V++D  CK   
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           M EA R+ + MV R V PN  TY  L DG C  G +  A EL   M + G + +  +YN 
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LING CK   +E+A+ +  EM + G +  V TY TL   L +  + + A  +  EM   G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +     TY   ++G C +G +    +L   +       ++  YN L+   C    +K   
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           E++  +    + PN  TYNI+I+G C    M +A     +M E        ++  LI   
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
            +  + S+      KM+ + +  +  + S  +D+   NE +L+S
Sbjct: 683 NKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISF-NEDNLES 725


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 226/472 (47%), Gaps = 9/472 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N+ +YNIL+   C  GRV      F  +  +   P+  T+  LI G  A   +  A  L 
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLL 314

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            ++ A G EPN   Y +++  LC  G    AL + E+M      +      +   Y+T++
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVIL------DEALYTTVL 368

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
            G C +G +  A+  F +M+ + +  D VTY ++I+GLC A +  EA++L  EM  + + 
Sbjct: 369 SGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLD 428

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
              VT+ V++D  CK  KM EA ++ + MVQRGV PN  TY  L DG C  G +  A EL
Sbjct: 429 VDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANEL 488

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              M + G + +  +YN LING CK   +E+A+    +M +  +KP V TY TL   L +
Sbjct: 489 LHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCK 548

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
              ++ A  L  EM   G+     TY   ++G C +G +    +L   +       +   
Sbjct: 549 SGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAAT 608

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN L+   C    +K   E++  +    + PN  TYNI+I+G C    M +A     +M 
Sbjct: 609 YNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMI 668

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           +        ++  LI    +  +  +  EL H M+++ +  ++ +    +DL
Sbjct: 669 QKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL 720



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 233/465 (50%), Gaps = 27/465 (5%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
           F+ + A+F+ L+  L        +A L  +L+ +G  P+    N +++ L        A+
Sbjct: 200 FSSDPASFDFLLLCL-------PSAPLLRRLRQYGISPSPEACNAVLSRLPLDE----AI 248

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            LF+E+ + N     VC     +Y+ ++  LC  G V  A+ LF +M      PDVVTY 
Sbjct: 249 ELFQELPHKN-----VC-----SYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYG 295

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LIHG C   +   A +L  EM+  GV+P+   +  ++  LC    + +A R+++ MVQR
Sbjct: 296 ILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQR 355

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            V  +   Y T++ GFC  G +  A   F  M+  G   D V+Y  +ING C+  E+EEA
Sbjct: 356 KVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEA 415

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             L +EM ++ +    VTY  L  G  +  ++  A ++ + M + GV  +  TYT   DG
Sbjct: 416 EKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDG 475

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK G +  A EL   +     EL+   YN LI+GLCK+G L+ A      +    L P+
Sbjct: 476 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPD 535

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V TY  +I  LC  G +D+A  L  +M +    P ++T+++L++GF          +LL 
Sbjct: 536 VYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLD 595

Query: 547 KMKEKKVMPDASIV-SIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
            M EK + P+A+   S++    ++N  ++KS        R  +VG
Sbjct: 596 WMLEKNIHPNAATYNSLMKQYCIEN--NMKSTTEIYKGMRSRDVG 638



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 232/465 (49%), Gaps = 9/465 (1%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           N  ++N L+K L    R+ +A  LF ++ +    P+V+TY  LI+G C  G    A+ L 
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLL 314

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
           +EM  G  E      PN   Y++++  LC +G++  A  +   M    +  D   Y +++
Sbjct: 315 DEMVAGGVE------PNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVL 368

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C+  D   A+R F EM  +G+    VT+  +++ LC+  +++EA +LL  M  R + 
Sbjct: 369 SGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLD 428

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
            +  TY  L+DG+C  GK+  A ++  +M   G   + V+Y  L +G CK  +V+ A  L
Sbjct: 429 VDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANEL 488

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
             EM +KG++    TYN+L  GL +   +E A++   +M    +  D  TYTT ID LCK
Sbjct: 489 LHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCK 548

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
           +G +  A  L + +     +  I  YN L++G C SGR++   +L   +    + PN  T
Sbjct: 549 SGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAAT 608

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YN +++  C +  M    +++  M      P+  T+++LI G  +     +      +M 
Sbjct: 609 YNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMI 668

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
           +K     A+  S ++ LL K +  +++   F    ++G   ES+V
Sbjct: 669 QKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDV 713



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 218/444 (49%), Gaps = 17/444 (3%)

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           R+ +   +P+    N+++  L  +    EA  LF +L       NV +YN L+  LC  G
Sbjct: 222 RLRQYGISPSPEACNAVLSRLPLD----EAIELFQELP----HKNVCSYNILLKALCDAG 273

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  LF+EMA+          P+ VTY  +I G C  G ++ A  L  +M    + P
Sbjct: 274 RVKDARQLFDEMASA---------PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEP 324

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +   Y S++  LC     ++A R+  +M+ + V      +  ++   C    +  A R  
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF 384

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M ++G+  +  TY T+++G C   ++  AE+L   M +     D+V+Y +LI+GYCK 
Sbjct: 385 DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKR 444

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            ++ EA  ++  MV +G+ P VVTY  L  GL +   V+ A +L  EM   G+  +  TY
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTY 504

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            + I+GLCK GY+ +A+     +     + D+  Y  LID LCKSG L  A  L   +  
Sbjct: 505 NSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLD 564

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P +VTYN+++ G C  G+++  + L   M E    P+  T++ L+  +   N    
Sbjct: 565 KGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKS 624

Query: 541 VNELLHKMKEKKVMPDASIVSIVV 564
             E+   M+ + V P+ +  +I++
Sbjct: 625 TTEIYKGMRSRDVGPNENTYNILI 648



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 187/349 (53%), Gaps = 6/349 (1%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           L   + +   +   GL  +  TY  +IN  C+   +         +       +  T+  
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           LI G     ++ EA  +   +   G  PNV+TY  L +GLC+ G    A  L  EM+N  
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            E+      N  TY+++I+GLCK G++++A      M    + PDV TY +LI  LC + 
Sbjct: 497 LEL------NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSG 550

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
           D + A  L  EM+D+G++P++VT+NV+M+  C + +++   +LLD M+++ + PNA TYN
Sbjct: 551 DLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYN 610

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           +LM  +C+   +    E++  M S     ++ +YNILI G+CK + ++EAL  + EM+ K
Sbjct: 611 SLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQK 670

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           G + T  +Y+ L   L +  +   A +LF +M+++G+ A++  Y  +ID
Sbjct: 671 GFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 223/466 (47%), Gaps = 9/466 (1%)

Query: 67  VSSFNILLASL---AKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           V S+NILL +L    + K      +     P++ TY ILI+  C +G +         ++
Sbjct: 259 VCSYNILLKALCDAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGELENAVKLLDEMV 318

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                PNA  + S++  L  +  I +A  +   +       +   Y T+++G C  G  +
Sbjct: 319 AGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLV 378

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A   F+EM             + VTY+T+I+GLC+   +++A+ L  +M    ++ D V
Sbjct: 379 SARRWFDEMQRKG------LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEV 432

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY  LI G C      EA ++   M+ +GV P+VVT+  + D LCK   +  A+ LL  M
Sbjct: 433 TYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM 492

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
             +G+  NACTYN+L++G C  G + +A      M++   K D  +Y  LI+  CK+ ++
Sbjct: 493 SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDL 552

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           + A SL +EM+ KGIKPT+VTYN L  G     +VE   KL D M    +  +  TY + 
Sbjct: 553 DRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSL 612

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           +   C    +    E+++ +R      +   YN LI G CK+  +K A      +     
Sbjct: 613 MKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGF 672

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
                +Y+ +I+ L    +  +AR+LF DM +     +   +D  I
Sbjct: 673 RLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 143/316 (45%), Gaps = 41/316 (12%)

Query: 98  TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
           TY +LI+ +CK G+++  F     +++   TPN  T+ +L  GL  +  +  A  L  ++
Sbjct: 433 TYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEM 492

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
              G E N  TYN+LINGLC+ G+   A+    +M           KP+  TY+T+ID L
Sbjct: 493 SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTA------CLKPDVYTYTTLIDAL 546

Query: 218 CKEGFVDKAKALFLQMKDE-----------------------------------NINPDV 242
           CK G +D+A +L  +M D+                                   NI+P+ 
Sbjct: 547 CKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNA 606

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
            TYNSL+   C  N+      ++  M  + V P+  T+N+++   CK R M EA    D 
Sbjct: 607 ATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDE 666

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M+Q+G R  A +Y+ L+       K   A ELF  M   G   +   Y+  I+       
Sbjct: 667 MIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDN 726

Query: 363 VEEALSLYREMVSKGI 378
           +E  L+L  E+V   I
Sbjct: 727 LESTLALCDELVEASI 742


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 240/514 (46%), Gaps = 42/514 (8%)

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
           D  L ATG   +++    L+  +C  G +      F   +R   TP   T+  LIKG  A
Sbjct: 282 DQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDA 341

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E    E   L  ++   G  P+   +N +I GL R      A+ LF+ +     + GV  
Sbjct: 342 EGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVV----DTGV-- 395

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+  TY  +I  L K   V +A  L+ +MK+  + P +VT +SL+ G C     +EA +
Sbjct: 396 -PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALK 454

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L+ EM  +G  P+ VT+  +M    K +  D+A  LL+ M Q GV     TYN L++G C
Sbjct: 455 LYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLC 514

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           ++ ++   +E+     S G     ++YN +ING+ K   +  AL++YR+M  KGI P +V
Sbjct: 515 MVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIV 574

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL---- 439
           TY +   G    +  + A+KL   M+ +G+  D   Y  FI+  CK G +  A+      
Sbjct: 575 TYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLL 634

Query: 440 ------------------FRTLRIL-------------KCELDIQAYNCLIDGLCKSGRL 468
                             ++ L+++             +   D + Y  LIDG  K G +
Sbjct: 635 LKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNV 694

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
            FA EL+  +     +P+  T+  +  GLC  G +D A+ L  DM      P+ +T++ML
Sbjct: 695 AFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNML 754

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           I+  IR  +  +  +L  KM    V+PD +  +I
Sbjct: 755 INAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNI 788



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 222/505 (43%), Gaps = 41/505 (8%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P+   Y I I   CK+          G++  +   P   T+NS++  L    R
Sbjct: 214 MAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGR 273

Query: 147 IMEAAALFTK-LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           + EA  L  + L A G + +V    TL+ G C  G    AL+LF+E        GV   P
Sbjct: 274 MDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRD----GVT--P 327

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI--------------------------- 238
             VTY+ +I G   EG  D+   L  QM ++ +                           
Sbjct: 328 TNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALF 387

Query: 239 -------NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
                   PDV TY  LIH L   +  +EA  L+ +M + GV+PS+VT + ++   C+  
Sbjct: 388 DLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKG 447

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            MDEA +L   M  +G  PN  TY TLM G+      ++A  L   M   G    + +YN
Sbjct: 448 CMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYN 507

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           ILING C    V E   + +  VS+G  PT +TYN++  G  +   +  AL ++ +M   
Sbjct: 508 ILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEK 567

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+  +  TYT+FIDG C+      AV+L   +R      DI AYN  I+  CK G +  A
Sbjct: 568 GITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHA 627

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
                 L    L PNV  YN  + G  N   M +A   +  M +   A D   +  LI G
Sbjct: 628 LHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDG 687

Query: 532 FIRINEPSKVNELLHKMKEKKVMPD 556
           F ++   +   EL  +M     +PD
Sbjct: 688 FSKVGNVAFALELYSEMLANHNIPD 712



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 221/470 (47%), Gaps = 8/470 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIA-FGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           G + +   Y++++   C +GR+    +  F  +  +   P+   +   I GL        
Sbjct: 183 GYYADAKMYDVVMRA-CVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADR 241

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +  K++  G +P   TYN++++ L + G    AL L ++M    G+     K +   
Sbjct: 242 AVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGK-----KMDVFL 296

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            +T++ G C  G + KA  LF +   + + P  VTY  LI G       +E  +L  +M+
Sbjct: 297 ATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMI 356

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           +QG+ PS   FN+++  L +N++ ++A  L DL+V  GV P+  TY  L+       K++
Sbjct: 357 EQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVH 415

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A  L+  M+  G K   V+ + L+ GYC+   ++EAL LY EM  KG  P  VTY TL 
Sbjct: 416 EAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLM 475

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            G  +    + A  L +EM ++GV+    TY   I+GLC    + E  E+ +        
Sbjct: 476 KGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV 535

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
                YN +I+G  K+G +  A  ++  +    + PN+VTY   I G C     D A  L
Sbjct: 536 PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKL 595

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            + M  N   PD+  ++  I+ F +    S     L  + +  + P+ ++
Sbjct: 596 LIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTV 645



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 14/420 (3%)

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTY 210
           ++++   G  P+  +   L+    R      AL LF+EM          CK    +   Y
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMR---------CKGYYADAKMY 191

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
             ++           A  LF +M    + PD   Y   I GLC   D + A ++  +M +
Sbjct: 192 DVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMRE 251

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLD-LMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            G++P   T+N ++D L K  +MDEA RL D +++  G + +     TLM G+CL G+I 
Sbjct: 252 AGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIG 311

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
           +A +LF      G    +V+Y +LI G       +E   L R+M+ +G+ P+   +N + 
Sbjct: 312 KALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVI 371

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL    Q E A+ LFD +   GV  D  TY   I  L K+  + EAV L+  ++    +
Sbjct: 372 KGLLRNKQWEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVK 430

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
             I   + L+ G C+ G +  A +L+  +P     PN VTY  +++G       DKA  L
Sbjct: 431 PSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYAL 490

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +M +N  +    T+++LI+G   ++   +V+E+L +   +  +P     + +++  VK
Sbjct: 491 LNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVK 550



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 178/382 (46%), Gaps = 13/382 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNI 101
           +EA  ++D M      P  V+  ++LL    K       K Y + +   G  PN  TY  
Sbjct: 415 HEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLY-SEMPGKGFPPNEVTYTT 473

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+  + K       +     + ++  +    T+N LI GL    R+ E   +  +  + G
Sbjct: 474 LMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEG 533

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P  +TYN++ING  + G    AL ++ +M     E G+   PN VTY++ IDG C+  
Sbjct: 534 FVPTTMTYNSIINGFVKAGMMGSALAMYRQMC----EKGIT--PNIVTYTSFIDGYCRTN 587

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             D A  L + M+   I+PD+  YN+ I+  C   + + A    + ++  G+ P+V  +N
Sbjct: 588 CCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYN 647

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
             +      + M EAS+    M+++ +  +   Y TL+DGF  +G +  A EL+  M + 
Sbjct: 648 SFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLAN 707

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               DD ++  L +G C++ +++ A  L  +M    + P  VTYN L        +++ A
Sbjct: 708 HNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEA 767

Query: 402 LKLFDEMQRDGVAADTRTYTTF 423
            +L D+M   GV  D  TY  F
Sbjct: 768 FQLHDKMLSSGVVPDDTTYNIF 789



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 3/239 (1%)

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           +  M + G   D  S   L+    +     +AL+L+ EM  KG       Y+ +      
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
                 A++LFDEM   GV  D R Y   I GLCK      AV++   +R    +     
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 455 YNCLIDGLCKSGRLKFAWELFCS--LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           YN ++D L K GR+  A  L     L  G  + +V     ++QG C  G++ KA DLF +
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKM-DVFLATTLMQGYCLHGEIGKALDLFDE 319

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +   P  +T+ +LI G        +  +L  +M E+ ++P     ++V+  L++N+
Sbjct: 320 AVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNK 378


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 235/472 (49%), Gaps = 8/472 (1%)

Query: 93  FP-NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           FP ++  +  +IN   +          F +++     P + TFN+L+  L   +   +A 
Sbjct: 91  FPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 150

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +F + K    + +V ++  +I G C  G+      +  +M     E+G+   PN V Y+
Sbjct: 151 RVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME----EMGL--SPNVVVYT 203

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+IDG CK G +++ K LF +M + ++  +  TY  LI+G        +   L+ +M   
Sbjct: 204 TLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLT 263

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+ P+V T+N ++   C + K++ A  L D M +RGV  N  TYNTL+ G C   ++  A
Sbjct: 264 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 323

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           E L   M+  G   + +SYN LI+GYC    +++A SL+ +M S G  P++ TYN L  G
Sbjct: 324 ERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAG 383

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             E         +  EM+  G++    TYT  +D L ++  I +A +++ ++       D
Sbjct: 384 FSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 443

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  Y  LI GLC  G +K A +LF SL    L PN V YN MI G C +G   +A  L  
Sbjct: 444 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLK 503

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           +M EN   P+V +++  I    +  + ++   LL  M E  + P  SI +++
Sbjct: 504 EMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 214/444 (48%), Gaps = 8/444 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P     +  I   H  S++ E A   F ++   G  P   T+N L+  L ++     A  
Sbjct: 92  PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 151

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +F E   GN       K +  ++  +I G C+ G++DK   +  QM++  ++P+VV Y +
Sbjct: 152 VFNE-TKGN------VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 204

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI G C   D    K+LF +M +  V  +  T+ V+++   K     +   L + M   G
Sbjct: 205 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 264

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + PN  TYN+++   C  GK+N A ELF  M   G   + V+YN LI G C+ + V EA 
Sbjct: 265 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 324

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   M   G+ P +++YNTL  G   I  ++ A  LF++M+  G +    TY   I G 
Sbjct: 325 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 384

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            +        ++ R +           Y  L+D L +S  ++ A++++ S+    LV ++
Sbjct: 385 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 444

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             Y ++I GLC  G M +A  LF  ++E    P+ + ++ +I+G+ +     +   LL +
Sbjct: 445 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 504

Query: 548 MKEKKVMPDASIVSIVVDLLVKNE 571
           M E  ++P+ +  +  + +L K+E
Sbjct: 505 MGENGMVPNVASYNSTIQILCKDE 528



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 198/398 (49%), Gaps = 12/398 (3%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V SF I++    +  + D       ++   GL PN+  Y  LI+  CK G +  G   F 
Sbjct: 164 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 223

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           ++       N  T+  LI G        +   L+ K+K  G  PNV TYN++I   C  G
Sbjct: 224 KMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 283

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  LF+EM     E GV C  N VTY+T+I GLC+E  V +A+ L  +MK + ++P
Sbjct: 284 KLNNAFELFDEMR----ERGVAC--NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSP 337

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++++YN+LI G C   + ++A  LF +M   G  PS+ T+N+++    + +     + ++
Sbjct: 338 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV 397

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  RG+ P+  TY  LMD       I +A +++ SME  G   D   Y +LI+G C  
Sbjct: 398 REMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVV 457

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++EA  L++ +    +KP  V YNT+  G  +      AL+L  EM  +G+  +  +Y
Sbjct: 458 GDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASY 517

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
            + I  LCK+    EA  L + +  L  +  I  +N +
Sbjct: 518 NSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 176/346 (50%), Gaps = 13/346 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNI 101
           ++ F +   M  M  SP  V  +  L+    KN      K    ++    +  N YTY +
Sbjct: 181 DKGFEVLGQMEEMGLSPN-VVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 239

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN F K+G    G   + ++  +   PN  T+NS+I     + ++  A  LF +++  G
Sbjct: 240 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 299

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              NV+TYNTLI GLC+    + A  L   M            PN ++Y+T+IDG C  G
Sbjct: 300 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLISYNTLIDGYCSIG 353

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            +DKA +LF QMK    +P + TYN LI G   A +      +  EM  +G+ PS VT+ 
Sbjct: 354 NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 413

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           ++MD L ++  +++A ++   M + G+  +   Y  L+ G C++G +  A +LF S++ M
Sbjct: 414 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 473

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
             K +DV YN +I GYCK      AL L +EM   G+ P V +YN+
Sbjct: 474 HLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 184/350 (52%), Gaps = 1/350 (0%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           V+ + ++I+    +    +A   F +M+ +G+ P   TFN ++  L K+   ++A R+ +
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
              +  V+ +  ++  ++ G C +G +++  E+ G ME MG   + V Y  LI+G CKN 
Sbjct: 155 -ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           ++E    L+ +M    +     TY  L  G F++   +  ++L+++M+  G+  +  TY 
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + I   C +G +  A ELF  +R      ++  YN LI GLC+  R+  A  L C +   
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            L PN+++YN +I G C+ G +DKA  LF  M+ +  +P + T+++LI GF      + V
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
            +++ +M+ + + P     +I++D LV+++   K+   +   E+ G V +
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 443



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 199/413 (48%), Gaps = 7/413 (1%)

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V+ +  +IN   R+     AL  F +M      IG    P + T++ ++  L K  F +
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQM------IGRGLVPGSNTFNNLLILLIKSNFFE 147

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           KA  +F + K  N+  DV ++  +I G C     ++   +  +M + G+ P+VV +  ++
Sbjct: 148 KAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 206

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D  CKN  ++   +L   M +  V  N  TY  L++GF  MG      EL+  M+  G  
Sbjct: 207 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIV 266

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +  +YN +I   C + ++  A  L+ EM  +G+   VVTYNTL  GL +  +V  A +L
Sbjct: 267 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 326

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
              M+RDG++ +  +Y T IDG C  G + +A  LF  ++       +  YN LI G  +
Sbjct: 327 MCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSE 386

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +       ++   +    L P+ VTY I++  L     ++KA  ++  ME+     D+  
Sbjct: 387 AKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI 446

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           + +LIHG   + +  + ++L   + E  + P+  I + ++    K   S ++L
Sbjct: 447 YGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRAL 499



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 161/309 (52%), Gaps = 6/309 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++  TG+ PN+YTYN +I   C  G+++  F  F  +       N  T+N+LI GL  E 
Sbjct: 259 KMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQER 318

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R++EA  L  ++K  G  PN+I+YNTLI+G C  G+   A +LF +M + +G+      P
Sbjct: 319 RVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS-SGQ-----SP 372

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  TY+ +I G  +         +  +M+   ++P  VTY  L+  L  +++  +A +++
Sbjct: 373 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 432

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   G+   +  + V++  LC    M EAS+L   + +  ++PN   YNT++ G+C  
Sbjct: 433 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 492

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G   RA  L   M   G   +  SYN  I   CK+++  EA  L ++M+  G+KP++  +
Sbjct: 493 GSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIW 552

Query: 386 NTLFLGLFE 394
           N +    F+
Sbjct: 553 NMISKARFD 561


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 229/473 (48%), Gaps = 13/473 (2%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHY----DTRLNATGLFPNLYTYNILINCFCKIGRVS 113
           LR H  P  V + N +L    + +H+        +  G+ P+  ++  L+   C+ GR  
Sbjct: 139 LRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMGVRPDARSFRALVLGCCQEGRFE 198

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                   + R  F+ ++AT   +++    + R  +   LF ++   G  PNV+ Y   +
Sbjct: 199 EADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWV 258

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +GLC+ G+   A ++ EEM      +G   KPN  T++++IDGLCK G+ ++A  LFL++
Sbjct: 259 DGLCKRGYVKQAFHVLEEM------VGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKL 312

Query: 234 -KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
            K  +  P+V TY  +I G C       A+ L   M++QG+ P+  T+  ++D  C+   
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGS 372

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            D A  L++ M   G  PN  TYN ++ GFC  GKI +A ++     S G   D V+Y +
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTM 432

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI  +CK   +  AL L+ +M      P + TY T+     +  Q+E + +LFD+    G
Sbjct: 433 LITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +    +TYT+ I G C+ G    A+++F  +    C  D   Y  LI GLCK  RL+ A 
Sbjct: 493 LVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEAR 552

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF--LDMEENAAAPDVI 523
            LF ++    +VP  VT   +    C   +   A      LD  + A A D +
Sbjct: 553 ALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADAL 605



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 213/426 (50%), Gaps = 9/426 (2%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+A +F +L+ G   E R  EA AL   +   G   +  T   ++   CR G       L
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238

Query: 189 FEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           F  M   GN        PN V Y+  +DGLCK G+V +A  +  +M  + + P+V T+ S
Sbjct: 239 FGRMVEMGN-------PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTS 291

Query: 248 LIHGLCHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           LI GLC       A RLF++++     +P+V T+ V++   CK  K+  A  LL  MV++
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G+ PN  TY TL+DG C  G  +RA EL   M+  G   +  +YN +I G+CK  ++++A
Sbjct: 352 GLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQA 411

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             + R   S+G+ P  VTY  L     +   + +AL LF++M  +    D  TYTT I  
Sbjct: 412 YKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAM 471

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            C+   + ++ +LF     +      Q Y  +I G C+ G+   A ++F  +     +P+
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPD 531

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            +TY  +I GLC + ++++AR LF  M +    P  +T   L + + R ++ +     L 
Sbjct: 532 PITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLD 591

Query: 547 KMKEKK 552
            + +++
Sbjct: 592 GLDKRQ 597



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 206/440 (46%), Gaps = 9/440 (2%)

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P+  ++  L+ G C+ G    A  L   M      +      ++ T + ++   C
Sbjct: 174 GMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSL------DSATCTVVVRAFC 227

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           ++G       LF +M +    P+VV Y + + GLC      +A  +  EM+ +G++P+V 
Sbjct: 228 RQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVY 287

Query: 279 TFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           T   ++D LCK    + A RL L L+     +PN  TY  ++ G+C  GK+ RAE L G 
Sbjct: 288 THTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGR 347

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   G   +  +Y  LI+G+C+    + A  L  +M  +G  P + TYN +  G  +  +
Sbjct: 348 MVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ A K+       G+  D  TYT  I   CK G+I  A++LF  +    C  DI  Y  
Sbjct: 408 IQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTT 467

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I   C+  +++ + +LF       LVP   TY  MI G C  G+   A  +F  M ++ 
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHG 527

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP-DASIVSIVVDLLVKNEISLK- 575
             PD IT+  LI G  + +   +   L   M +K ++P D + V++  +   +++ ++  
Sbjct: 528 CLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAV 587

Query: 576 SLPSFLVQERQGEVGESNVK 595
           S    L + +Q    ++ V+
Sbjct: 588 SFLDGLDKRQQAHAADALVR 607



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 5/344 (1%)

Query: 225 KAKALFLQMKDENINPDVVTYNSLIH-GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           +A  + L+++   +   V T N ++  GL   + +  A++ F  M   GV+P   +F  +
Sbjct: 131 EATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRAL 187

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C+  + +EA  LL  M + G   ++ T   ++  FC  G+      LFG M  MG 
Sbjct: 188 VLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGN 247

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             + V+Y   ++G CK   V++A  +  EMV KG+KP V T+ +L  GL +I   E A +
Sbjct: 248 PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFR 307

Query: 404 LFDEM-QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           LF ++ +      +  TYT  I G CK G +  A  L   +       +   Y  LIDG 
Sbjct: 308 LFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGH 367

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+ G    A+EL   +     +PN+ TYN +I G C  G++ +A  +          PD 
Sbjct: 368 CRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDK 427

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           +T+ MLI    +    +   +L ++M E    PD    + ++ +
Sbjct: 428 VTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAM 471


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 218/406 (53%), Gaps = 19/406 (4%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHTMIALNLFEE 191
           ++N+++      +RIM A A+F ++   G  +P+V TY T+I G C+ G    A N+F+E
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE 278

Query: 192 MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD-ENINPDVVTYNSLIH 250
           M          CKPN VTY+T+I+G CK+G ++ A  +  QM + E+  PD VTY +LI 
Sbjct: 279 MG---------CKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLID 329

Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
           G C   +  EA +   EM+ +  +P+V+T+N I+  LC N  +DEA R++  M   G++ 
Sbjct: 330 GYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKD 389

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           N  T+ +++ G C++GK++ A      M  +G + D  +Y +++N YCK  + ++A+SL 
Sbjct: 390 NVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLL 449

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK- 429
           +EM S+GI P+V ++N +F  L E  + + A  +  +M++ G   +  +Y+T IDGLCK 
Sbjct: 450 KEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKA 509

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G + E  E    +      LD   Y+ L+ G C+ G    A  LFC +     V N+ +
Sbjct: 510 KGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLES 569

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
           +   ++GL    +  +    F +M       D       IH + RI
Sbjct: 570 FLAFVKGLSAKEKAFEVEKFFEEMSRRCPGID-------IHKYRRI 608



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 200/417 (47%), Gaps = 10/417 (2%)

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
            +K       I  A   F + K       + +YN ++    +    M+A  +F+++    
Sbjct: 188 FVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIV--- 244

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
            + GVV KP+  TY+TII G CK G ++ AK +F +M      P++VTYN++I+G C   
Sbjct: 245 -KEGVV-KPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKG 299

Query: 257 DWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
               A ++  +M + +   P  VT+  ++D  CK  +++EA + ++ MV R   PN  TY
Sbjct: 300 LMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTY 359

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N ++ G CL G ++ A+ +   M   G K +  ++  ++ G C   ++++A    +EMV 
Sbjct: 360 NAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVG 419

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
            G++     Y  +     +I + + A+ L  EM+  G+     ++      L ++G   +
Sbjct: 420 LGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDK 479

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKS-GRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           A  + R ++ L C  +  +Y+ +IDGLCK+ GR+    E    +       +   Y+ ++
Sbjct: 480 AGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLV 539

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           +G C DG  D A  LF +M +     ++ +F   + G     +  +V +   +M  +
Sbjct: 540 KGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRR 596



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 181/389 (46%), Gaps = 16/389 (4%)

Query: 50  AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA---TGLFPNLYTYNILINCF 106
           A  +FD +++     P VS++  ++    K    +   N     G  PNL TYN +IN F
Sbjct: 236 ARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNLVTYNTMINGF 295

Query: 107 CKIGRVSLGFIAFGRILRS--CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           CK G +        ++  +  C  P+  T+ +LI G      + EA     ++ +  CEP
Sbjct: 296 CKKGLMESAMKIVDQMTETEDCM-PDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEP 354

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           NV+TYN +I GLC  G+   A  +   M  NG        K N  T+++I+ GLC  G +
Sbjct: 355 NVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNG-------LKDNVATHTSILKGLCVVGKL 407

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           D A     +M    +  D   Y  +++  C     ++A  L  EM  +G+ PSV +FN +
Sbjct: 408 DDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAV 467

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC-LMGKINRAEELFGSMESMG 342
              L ++ K D+A  +L  M Q G  PN  +Y+T++DG C   G+++  EE    M   G
Sbjct: 468 FRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNG 527

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              D   Y+ L+ GYC++   + A+ L+ EM+  G    + ++     GL    +     
Sbjct: 528 HHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVE 587

Query: 403 KLFDEMQRDGVAADTRTYTTFID-GLCKN 430
           K F+EM R     D   Y   +D  LCKN
Sbjct: 588 KFFEEMSRRCPGIDIHKYRRILDEHLCKN 616



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 169/324 (52%), Gaps = 6/324 (1%)

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGV-QPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           +YN+++     AN    A+ +F +++ +GV +P V T+  I+   CK   ++ A  + D 
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE 278

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNK 361
           M   G +PN  TYNT+++GFC  G +  A ++   M E+  C  D V+Y  LI+GYCK  
Sbjct: 279 M---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRG 335

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           E+EEA+    EMVS+  +P V+TYN +  GL     V+ A ++   M+ +G+  +  T+T
Sbjct: 336 ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHT 395

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + + GLC  G + +A    + +  L  E D +AY  +++  CK G+   A  L   +   
Sbjct: 396 SILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSR 455

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN-EPSK 540
            + P+V ++N + + L   G+ DKA  +   M++    P+ +++  +I G  +      +
Sbjct: 456 GINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHE 515

Query: 541 VNELLHKMKEKKVMPDASIVSIVV 564
           V E +  M       DAS+ S +V
Sbjct: 516 VEEFVDDMCRNGHHLDASMYSWLV 539



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 150/305 (49%), Gaps = 5/305 (1%)

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGV-RPNACTYNTLMDGFCLMGKINRAEELFGS 337
           ++N I+    K  ++  A  + D +V+ GV +P+  TY T++ G+C MG I  A+ +F  
Sbjct: 219 SYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVF-- 276

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKGIKPTVVTYNTLFLGLFEIH 396
            + MGCK + V+YN +ING+CK   +E A+ +  +M  ++   P  VTY TL  G  +  
Sbjct: 277 -DEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRG 335

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           ++E A+K  +EM       +  TY   I GLC NG + EA  +   +R+   + ++  + 
Sbjct: 336 ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHT 395

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
            ++ GLC  G+L  A      +    +  +   Y +++   C  G+ D A  L  +M+  
Sbjct: 396 SILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSR 455

Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
              P V +F+ +    +   +  K   +L +MK+    P+    S V+D L K +  +  
Sbjct: 456 GINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHE 515

Query: 577 LPSFL 581
           +  F+
Sbjct: 516 VEEFV 520


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 236/480 (49%), Gaps = 8/480 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P+   Y I I+  CK+          G++  + F P   T++S++  L    R
Sbjct: 211 MAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRR 270

Query: 147 IMEAAALFTK-LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           + EA  L  + L A G + +V+    L++G C  G    AL+LF+E+ +     GV   P
Sbjct: 271 MDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD----GVT--P 324

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             VTY  +I G   EG  D+   L  QM ++ + P    +N +I GL     W +A  L 
Sbjct: 325 TNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL 384

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             ++D GV P V T+  ++  LCK++K+ EA  L D M + GV+P+  TY++L+ G+C  
Sbjct: 385 KLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+++ A +L+  M   G   ++V+Y  L+ GY K K  + A +L  EM   G+     TY
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  GL+ +++V    ++      +G    T TY + I+G  K G +  A  ++R +R 
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                +I  Y   IDG C++     A +L   +    + P++  YN  I   C  G M +
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A    + + ++   PDV  ++  + G+  +   ++ ++  + M +++V+ D  I + ++D
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLID 683



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 228/487 (46%), Gaps = 7/487 (1%)

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
           D  L ATG   ++    +L++ +C  G V      F  ++    TP   T+  LIKG  A
Sbjct: 279 DQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDA 338

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E    E   L  ++   G  P+   +N +I GL R      A+ L + +     + GV  
Sbjct: 339 EGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVV----DTGV-- 392

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+  TY  +I  LCK   + +A  L+ +MK+  + P +VTY+SL+ G C     +EA +
Sbjct: 393 -PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALK 451

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L+ EM D+G  P+ VT+  +M    K +  D A  LL+ M Q GV     TYN L++G  
Sbjct: 452 LYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLY 511

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           ++ ++   +E+     S G     ++YN +ING+ K   +  A  +YR+M  KGI P +V
Sbjct: 512 MVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIV 571

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY +   G    +  + A+KL   ++RDG+  D   Y  FID  CK G +  A+     L
Sbjct: 572 TYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLL 631

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+  YN  + G      +  A + + S+    +V +   Y  +I G    G +
Sbjct: 632 LKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNV 691

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             A +L+ +M  N   PD  TF  L HG  R  +      LL  M+   V P+    +++
Sbjct: 692 AFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNML 751

Query: 564 VDLLVKN 570
           ++  V++
Sbjct: 752 INACVRD 758



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 230/473 (48%), Gaps = 7/473 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P   TY +LI      G     +    +++     P+   FN +IKGL  + R  +A
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDA 380

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   G  P+V TY  LI+ LC+      A+NL+++M     E GV  KP+ VTY
Sbjct: 381 IGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMK----EAGV--KPSIVTY 433

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            +++ G C++G +D+A  L+ +M D+   P+ VTY +L+ G      ++ A  L  EM  
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
            GV     T+N++++ L    ++ E   +L   +  G  P   TYN++++GF   G +  
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A  ++  M   G   + V+Y   I+GYC+    + A+ L   +   GI+P +  YN    
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
              +   +  AL     + +DG+  D   Y +F+ G      + EA + + ++   +   
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           D + Y  LIDG  K G + FA EL+  +    ++P+  T+  +  GLC  G +D A+ L 
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            DM     +P+++T++MLI+  +R  +  +  +L  +M    V+PD +   I+
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 214/488 (43%), Gaps = 43/488 (8%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           + R++     P+A +   L+      +   +A  LF +++  GC  +   Y+ +I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ LF+EMA      G   KP+   Y+  I GLCK    D+A  +  +M++   
Sbjct: 198 GGMHCDAVRLFDEMA------GAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251

Query: 239 NPDVVTYNS------------------------------------LIHGLCHANDWNEAK 262
            P  +TY+S                                    L+HG C   +  +A 
Sbjct: 252 EPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKAL 311

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF E++  GV P+ VT+ V++         DE  +L   M+++G+ P+   +N ++ G 
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGL 371

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
               +   A  L   +   G   D  +Y  LI+  CK++++ EA++L+ +M   G+KP++
Sbjct: 372 LRDKRWKDAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY++L LG  E  +++ ALKL+ EM   G   +  TYTT + G  K      A  L   
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +R          YN LI+GL    R+    E+         VP  +TYN +I G    G 
Sbjct: 491 MRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGM 550

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           M  A  ++  M +    P+++T+   I G+ R N      +LL  ++   + PD +  + 
Sbjct: 551 MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNA 610

Query: 563 VVDLLVKN 570
            +D   K 
Sbjct: 611 FIDTFCKQ 618



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 187/381 (49%), Gaps = 12/381 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K++     +N        G+ P++ TY+ L+  +C+ GR+      
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +    F PN  T+ +L+KG   +     A AL  +++  G      TYN LINGL  
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL-- 510

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             + +  +   +EM       G V  P T+TY++II+G  K G +  A  ++ QM+ + I
Sbjct: 511 --YMVNRVCEVDEMLKRFLSEGFV--PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++VTY S I G C  N  + A +L I +   G+QP +  +N  +D  CK   M  A  
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L L+++ G+ P+   YN+ + G+  +  +  A + + SM       D   Y  LI+G+ 
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   V  AL LY EM++  + P   T+  L  GL     ++ A +L D+M+R  V+ +  
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 419 TYTTFIDGLCKNGYIIEAVEL 439
           TY   I+   ++G + EA +L
Sbjct: 747 TYNMLINACVRDGKLQEAFQL 767



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 3/239 (1%)

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           +  M + G   D  S   L+          +AL+L+ EM  KG       Y+ +      
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
                 A++LFDEM   GV  D R Y   I GLCK      A+++   +R    E     
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 455 YNCLIDGLCKSGRLKFAWELFCS--LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           Y+ ++D L K  R+  A  L     L  G  + +VV   +++ G C +G++ KA DLF +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKM-DVVLATMLMHGYCLNGEVGKALDLFDE 316

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +  +   P  +T+ +LI G        +  +L  +M E+ ++P     ++V+  L++++
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDK 375


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/553 (28%), Positives = 256/553 (46%), Gaps = 39/553 (7%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N++LAS+ K+K  +        ++  G+ PN+ T+NILIN  C  G +      
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++  + F P   T+N+L+     + R   A  L   +   G E +V TYN  I+ LC 
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
              +  A  L ++M         +  PN VTY+T+I+G  KEG +  A  +F +M   ++
Sbjct: 316 NHRSAKAYLLLKKMRK------EMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ-----------------------P 275
           +P+ VTYN+LI G CH  D+ EA RL   M   G++                        
Sbjct: 370 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGA 429

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
              T NV++  LC++ K+ EA + L  M + G+ PN+ TY+ +++G+  +G    A   F
Sbjct: 430 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 489

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M   G      +Y  L+ G CK   + EA      +         V YNTL     + 
Sbjct: 490 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 549

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA- 454
             +  A+ LFD+M ++ V  D+ TY++ + GLC+ G  + AV LF T             
Sbjct: 550 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 609

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           Y CL+DGL K+G  K A+  F  +      P+ V +N +I      GQM KA D F  M 
Sbjct: 610 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 669

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN---E 571
                P++ T+++L+HGF +     +   L   M  + + PD      ++  L K+   +
Sbjct: 670 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 729

Query: 572 ISLKSLPSFLVQE 584
           + +K L   +++E
Sbjct: 730 LGVKLLGKMIMEE 742



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 255/571 (44%), Gaps = 47/571 (8%)

Query: 53  IFDYMLRMHP---SPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILI 103
           IF  ++  +P   S P V  F++L+    K    D  +         G  P++YT N+++
Sbjct: 148 IFGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMIL 205

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
               K  R  L +  F  +      PN  TFN LI GL  E  + +A  L  +++  G  
Sbjct: 206 ASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFV 265

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNTVTYSTIIDGLCKE 220
           P ++TYNTL+N  C+ G    A+ L + M         +CK    +  TY+  ID LC  
Sbjct: 266 PTIVTYNTLLNWYCKKGRYKAAIELIDYM---------ICKGIEADVCTYNVFIDNLCTN 316

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
               KA  L  +M+ E I+P+ VTYN+LI+G         A ++F EM    + P+ VT+
Sbjct: 317 HRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTY 376

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNA---------------C--------TYNT 317
           N ++   C     +EA RLLD M   G+R N                C        T N 
Sbjct: 377 NALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNV 436

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           L+   C  GK+  AE+    M  +G   + ++Y+ +INGY    +   A S + +M+  G
Sbjct: 437 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 496

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P+  TY +L  GL +   +  A K  + +     A D+  Y T +   CK+G + EAV
Sbjct: 497 QHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV 556

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQG 496
            LF  +       D   Y+ L+ GLC+ G+   A  LF  ++  G L PN V Y  ++ G
Sbjct: 557 ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDG 616

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           L   G    A   F +M +    PD + F+ +I    R  +  K N+    M+   V P+
Sbjct: 617 LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 676

Query: 557 ASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            +  +I++    K +  L+ L  +    R+G
Sbjct: 677 LATYNILLHGFSKKQALLRYLSLYSTMMREG 707



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 236/503 (46%), Gaps = 25/503 (4%)

Query: 71  NILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
           N+L++SL ++      + +   ++  GL PN  TY+ +IN +  IG     F  F  +++
Sbjct: 435 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 494

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
               P+  T+ SL+KGL     ++EA     +L       + + YNTL+   C++G+   
Sbjct: 495 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 554

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF-LQMKDENINPDVV 243
           A+ LF++M   N        P++ TYS+++ GLC++G    A  LF   M    + P+ V
Sbjct: 555 AVALFDKMVQNN------VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 608

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            Y  L+ GL  A     A   F EMM +G  P  V FN I+D   +  +M +A+     M
Sbjct: 609 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 668

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE- 362
              GV PN  TYN L+ GF     + R   L+ +M   G   D ++++ LI G  K+   
Sbjct: 669 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 728

Query: 363 -----------VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
                      +EE+  +  EM+  G+ P    Y TL  G+  +  ++ A KL DEM+  
Sbjct: 729 DLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEAL 788

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G  +     +  + GL   G   +A+ +   +  ++    I  +  L+   C+  ++  A
Sbjct: 789 GFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEA 848

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +L   +    L  +VV YN++I G+C +G    A +L+ +M      P++ T+ +L+  
Sbjct: 849 LKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDA 908

Query: 532 FIRINEPSKVNELLHKMKEKKVM 554
               N   +  +LL  ++E+ ++
Sbjct: 909 ISAANNLIQGEKLLTDLQERGLI 931



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 235/492 (47%), Gaps = 19/492 (3%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +N  G   + +T N+L++  C+ G++         + R    PN+ T++ +I G  +   
Sbjct: 422 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 481

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            + A + F  +   G  P+  TY +L+ GLC+ G+ + A      +    G +      +
Sbjct: 482 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV------D 535

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           +V Y+T++   CK G + +A ALF +M   N+ PD  TY+SL+ GLC       A  LF 
Sbjct: 536 SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 595

Query: 267 EMMDQGVQ-PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M +G   P+ V +  ++D L K      A    + M+++G  P+   +N ++D     
Sbjct: 596 TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 655

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G++ +A + F +M   G   +  +YNIL++G+ K + +   LSLY  M+ +GI P  +T+
Sbjct: 656 GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 715

Query: 386 NTLFLGLFEIHQVEHALKLF------------DEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           ++L LGL +    +  +KL              EM  +GV      Y T I+G+C+ G I
Sbjct: 716 HSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDI 775

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A +L   +  L       A + ++ GL   G+ + A  +   +    L+P + T+  +
Sbjct: 776 QGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTL 835

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +   C D ++ +A  L   ME      DV+ +++LI G     + +   EL  +M+ + +
Sbjct: 836 MHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDL 895

Query: 554 MPDASIVSIVVD 565
            P+ +  +++VD
Sbjct: 896 CPNITTYAVLVD 907



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 176/384 (45%), Gaps = 24/384 (6%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNI 101
           +EA  +FD M++ +  P   +  ++L     K K       + T +    LFPN   Y  
Sbjct: 553 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 612

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L++   K G     F  F  +++    P+   FN++I       ++M+A   F+ ++ +G
Sbjct: 613 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 672

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PN+ TYN L++G  +    +  L+L+  M       G+   P+ +T+ ++I GL K G
Sbjct: 673 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE----GIF--PDKLTFHSLILGLSKSG 726

Query: 222 FVD------------KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
             D            ++  +  +M +  + P    Y +LI+G+C   D   A +L  EM 
Sbjct: 727 IPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 786

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G     V  + ++  L    K ++A  +LD M++  + P   T+ TLM  FC   KI 
Sbjct: 787 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 846

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A +L G ME  G K D V+YN+LI G C N +   A  LY EM  + + P + TY  L 
Sbjct: 847 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 906

Query: 390 LGLFEIHQVEHALKLFDEMQRDGV 413
             +   + +    KL  ++Q  G+
Sbjct: 907 DAISAANNLIQGEKLLTDLQERGL 930



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 18/280 (6%)

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM-----------------GKIN 329
           L K R  D A  +L  + Q G+   +  +  LMD + L                  G I+
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKS-IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMID 180

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            A E F  +  +G K    + N+++    K+K  E   SL+REM  KGI P V T+N L 
Sbjct: 181 YAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILI 240

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL     ++ A  L  +M+ +G      TY T ++  CK G    A+EL   +     E
Sbjct: 241 NGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE 300

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
            D+  YN  ID LC + R   A+ L   +   ++ PN VTYN +I G   +G++  A  +
Sbjct: 301 ADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQV 360

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           F +M +   +P+ +T++ LI G   + +  +   LL  M+
Sbjct: 361 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 400


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 203/378 (53%), Gaps = 9/378 (2%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  PN + +N+L++ FCK+G V    + F  I +    P   +FN+LI G      + E
Sbjct: 136 SGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEE 195

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
              L   +++    P+V T++ LINGLC+ G       LF+EM  G G +     PN VT
Sbjct: 196 GFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC-GKGLV-----PNGVT 249

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++ +IDG CK G VD A   F  M  + + PD+VTYN+LI+GLC   D  EA+RL  EM 
Sbjct: 250 FTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMS 309

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G++P  +TF  ++D  CK   M+ A  +   MV+ G+  +   +  L+ G C  G+++
Sbjct: 310 ASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVH 369

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            AE +   M S G K DD +Y ++++ +CK   V     L +EM S G  P VVTYN L 
Sbjct: 370 DAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALM 429

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  QV++A  L D M   GVA +  TY   ++G  K+G  ++ V++F + + L   
Sbjct: 430 NGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD-VDIFNSEKGLV-- 486

Query: 450 LDIQAYNCLIDGLCKSGR 467
            D  +Y  L++   K+ +
Sbjct: 487 KDYASYTALVNESSKTSK 504



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 207/395 (52%), Gaps = 15/395 (3%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            + A + ++   G  PN   +N L++G C+ G    A  +F+E+           +P  V
Sbjct: 125 RSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRG------LRPTVV 178

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           +++T+I G CK G V++   L   M+ E + PDV T+++LI+GLC     +E   LF EM
Sbjct: 179 SFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
             +G+ P+ VTF V++D  CK  K+D A +   +M+ +GVRP+  TYN L++G C +G +
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A  L   M + G + D +++  LI+G CK  ++E AL + R MV +GI+   V +  L
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL    +V  A ++  +M   G   D  TYT  +D  CK G +    +L + ++    
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
              +  YN L++GLCK G++K A  L  ++ +  + PN +TYNI+++G    G    + D
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS---SVD 475

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           + +   E     D  ++  L      +NE SK ++
Sbjct: 476 VDIFNSEKGLVKDYASYTAL------VNESSKTSK 504



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 180/345 (52%), Gaps = 6/345 (1%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +L S + PN   FN L+ G      +  A  +F ++   G  P V+++NTLI+G C+ G 
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGA 192

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
                 L      G  E   VC P+  T+S +I+GLCKEG +D+   LF +M  + + P+
Sbjct: 193 VEEGFRL-----KGVMESERVC-PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPN 246

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
            VT+  LI G C     + A + F  M+ QGV+P +VT+N +++ LCK   + EA RL++
Sbjct: 247 GVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 306

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M   G+RP+  T+ TL+DG C  G +  A E+   M   G + DDV++ +LI+G C++ 
Sbjct: 307 EMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDG 366

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            V +A  + R+M+S G KP   TY  +     +   V    KL  EMQ DG      TY 
Sbjct: 367 RVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYN 426

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
             ++GLCK G +  A  L   +  +    +   YN L++G  K G
Sbjct: 427 ALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 185/343 (53%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           ++++ A +L++ D    P+   +N L+HG C       A+ +F E+  +G++P+VV+FN 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++   CK   ++E  RL  +M    V P+  T++ L++G C  G+++    LF  M   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
              + V++ +LI+G CK  +V+ AL  ++ M+++G++P +VTYN L  GL ++  ++ A 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
           +L +EM   G+  D  T+TT IDG CK G +  A+E+ R +     ELD  A+  LI GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           C+ GR+  A  +   +      P+  TY +++   C  G +     L  +M+ +   P V
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           +T++ L++G  +  +      LL  M    V P+    +I+++
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLE 465



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 150/307 (48%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
            ++E++D G  P+   FNV+M   CK   +  A  + D + +RG+RP   ++NTL+ G C
Sbjct: 129 FYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCC 188

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G +     L G MES     D  +++ LING CK   ++E   L+ EM  KG+ P  V
Sbjct: 189 KAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGV 248

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           T+  L  G  +  +V+ ALK F  M   GV  D  TY   I+GLCK G + EA  L   +
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 308

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D   +  LIDG CK G ++ A E+   +    +  + V + ++I GLC DG++
Sbjct: 309 SASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRV 368

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             A  +  DM      PD  T+ M++  F +        +LL +M+    +P     + +
Sbjct: 369 HDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNAL 428

Query: 564 VDLLVKN 570
           ++ L K 
Sbjct: 429 MNGLCKQ 435



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 13/244 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
           +E   +FD M      P  V+ F +L+    K    D  L       A G+ P+L TYN 
Sbjct: 229 DEGSLLFDEMCGKGLVPNGVT-FTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNA 287

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LIN  CK+G +         +  S   P+  TF +LI G      +  A  +  ++   G
Sbjct: 288 LINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEG 347

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            E + + +  LI+GLCR G    A  +  +M +         KP+  TY+ ++D  CK+G
Sbjct: 348 IELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAG------FKPDDPTYTMVVDCFCKKG 401

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            V     L  +M+ +   P VVTYN+L++GLC       AK L   M++ GV P+ +T+N
Sbjct: 402 NVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYN 461

Query: 282 VIMD 285
           ++++
Sbjct: 462 ILLE 465



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 103/204 (50%)

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           E+E + + Y E++  G  P    +N L  G  ++  V  A  +FDE+ + G+     ++ 
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           T I G CK G + E   L   +   +   D+  ++ LI+GLCK GRL     LF  +   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            LVPN VT+ ++I G C  G++D A   F  M      PD++T++ LI+G  ++ +  + 
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 542 NELLHKMKEKKVMPDASIVSIVVD 565
             L+++M    + PD    + ++D
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLID 325



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 15/153 (9%)

Query: 69  SFNILLASLAKN-KHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +F +L++ L ++ + +D       + + G  P+  TY ++++CFCK G V +GF     +
Sbjct: 354 AFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P   T+N+L+ GL  + ++  A  L   +   G  PN ITYN L+ G  + G +
Sbjct: 414 QSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSS 473

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
            + +++F      N E G+V   +  +Y+ +++
Sbjct: 474 -VDVDIF------NSEKGLV--KDYASYTALVN 497



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 49/102 (48%)

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L+ +W  +  +      PN   +N+++ G C  G +  AR +F ++ +    P V++F+ 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           LI G  +     +   L   M+ ++V PD    S +++ L K
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCK 224


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 246/512 (48%), Gaps = 41/512 (8%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A G  P+L T+N ++  FC  G V +     G + +S   P+  ++N LIKG      
Sbjct: 209 MTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGW 268

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  +F  +   GCEP V+TYN L++ LC  G    A  LF+EMA    ++G+  + N
Sbjct: 269 SRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMA----QVGI--QVN 322

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN-------------SLIHG-- 251
           T+T++ +IDG  K G +D+A A + +M+   + PD  T+N              L+H   
Sbjct: 323 TITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHD 382

Query: 252 -----------------LCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                            LC  +  ++A  L +  ++QGV   V  FN ++    K    +
Sbjct: 383 MFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHE 442

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNIL 353
           EAS L  +M + G+ P++ T+N L+ G C  G+++ A+ L   M S G C     S+ I 
Sbjct: 443 EASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL--STSFTIC 500

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ++ Y ++     AL  + +M + G++   + ++    GL  +  V  A + F EM   G+
Sbjct: 501 LDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGI 560

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  TY + I  LCK G + EA++L + +R      DI   N LIDGLC+ G+LK    
Sbjct: 561 VPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDN 620

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   +    L P+ VTYN +I   C    M+ A +    M      PD+ T+++ +H   
Sbjct: 621 LLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLC 680

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           R +  ++  +LL ++      P++   + ++D
Sbjct: 681 RNHMLNQAGKLLDELVAVDCSPNSVTYNTLMD 712



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 225/497 (45%), Gaps = 39/497 (7%)

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           + G V   +  F  +      P+ ATFN+++ G      +  A+ L   +   G  P+V 
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           +YN LI G C  G +  A  +FE M          C+P  VTY+ ++D LC EG + +A+
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSG------CEPTVVTYNILVDVLCHEGRMPEAR 308

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE- 286
            LF +M    I  + +T+N LI G   +   ++A   + EM  +G+ P   TFN+I    
Sbjct: 309 RLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARA 368

Query: 287 -------------------------------LCKNRKMDEASRLLDLMVQRGVRPNACTY 315
                                          LC + ++D+A  LL   +++GV      +
Sbjct: 369 HKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGF 428

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           N L+  +   G    A EL+  M  +G      ++N LI G C    ++EA  L   MVS
Sbjct: 429 NALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVS 488

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           KG   +  ++       F       ALK +D+M   G+  D   ++ +I+GLC+   + E
Sbjct: 489 KGYCLST-SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNE 547

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A + F  +       +   YN +I  LCK+G +  A +L  ++    LVP++ T NI+I 
Sbjct: 548 AYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILID 607

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           GLC +G++    +L LDM  N   PD +T++ +I+ + R  + +     ++KM      P
Sbjct: 608 GLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEP 667

Query: 556 DASIVSIVVDLLVKNEI 572
           D    +I +  L +N +
Sbjct: 668 DIFTYNIWMHSLCRNHM 684



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 220/490 (44%), Gaps = 74/490 (15%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
           EA  +  +++  G  P++   + L+  L R+G    A N+FEEM A G        +P+ 
Sbjct: 166 EALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGP-------RPSL 218

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            T++ ++ G C  G V  A  L   M    I PDV +YN LI G C      +A ++F  
Sbjct: 219 ATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEG 278

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G +P+VVT+N+++D LC   +M EA RL D M Q G++ N  T+N L+DG+   G+
Sbjct: 279 MHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQ 338

Query: 328 INRAEELFGSMESMGCKHDDVSYNILIN-----GY------------------------- 357
           +++A   +  M++ G   D  ++NI+       GY                         
Sbjct: 339 MDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVC 398

Query: 358 --CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             C +  +++A  L    + +G+   V  +N L     +    E A +L+  M + G+A 
Sbjct: 399 RLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAP 458

Query: 416 DTRTYTTFIDGLCKNGYIIEAVEL----------------------FR---TLRILKC-- 448
            + T+   I GLC  G + EA  L                      FR    +  LKC  
Sbjct: 459 SSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWD 518

Query: 449 -------ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
                  + D  A++  I+GLC+   +  A++ F  +    +VPN +TYN +I  LC  G
Sbjct: 519 DMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAG 578

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
            M +A  L  +M ++   PD+ T ++LI G  R  +   V+ LL  M    + PD    +
Sbjct: 579 NMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYN 638

Query: 562 IVVDLLVKNE 571
            +++   + +
Sbjct: 639 TIINAYCRAQ 648



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 203/462 (43%), Gaps = 59/462 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  +FD M ++      ++ FN+L+   AK+   D        + A GL P+  T+NI+
Sbjct: 306 EARRLFDEMAQVGIQVNTIT-FNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNII 364

Query: 103 INCFCKIGRVS--------------------------------------LGFIAFGRILR 124
                K G  +                                      LG I  G  LR
Sbjct: 365 AARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLR 424

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
                    FN+LI     E    EA+ L+  +   G  P+  T+N LI GLC  G    
Sbjct: 425 ------VTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDE 478

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A  L E M +    +       + +++  +D   ++G    A   +  M +  +  D + 
Sbjct: 479 AQLLLEHMVSKGYCL-------STSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIA 531

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           +++ I+GLC  +  NEA + F EM  +G+ P+ +T+N I+  LCK   M EA +L+  M 
Sbjct: 532 FSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMR 591

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           Q G+ P+  T N L+DG C  GK+   + L   M S G   D V+YN +IN YC+ +++ 
Sbjct: 592 QSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMN 651

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            A++   +M+  G +P + TYN     L   H +  A KL DE+     + ++ TY T +
Sbjct: 652 SAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLM 711

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           DG+C +  +  A+ L   L  +  + +    N  +   CK G
Sbjct: 712 DGICSD-VLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQG 752


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 244/524 (46%), Gaps = 56/524 (10%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  +LYTYNI+I+  CK+ R +  ++   R+     TP+  ++N+LI G   E +
Sbjct: 290 MEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGK 349

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK-- 204
           I  A  +F ++     +P+V TY  LI+G CR G T  A  +  EM         V K  
Sbjct: 350 INLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAK 409

Query: 205 ------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
                       P+ +TYS +I+G+CK G + + K +  +M+   + P+ V Y +L+   
Sbjct: 410 QILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYF 469

Query: 253 CHANDWNEAKRLFIEMMDQG-----------------------------------VQPSV 277
           C A    EA + F+++   G                                   +   V
Sbjct: 470 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDV 529

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
            +FN I+D  C+   + EA  + D MV+ G  P+ CTY +L+ G C  G + +A+E    
Sbjct: 530 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVY 589

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +    C  D+ + N L+ G CK+  ++EAL L  +MV++ I P   TY  L  G  +  +
Sbjct: 590 LLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGK 649

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAY 455
           +  AL L   M   G+  DT  YT  ++GL   G +  A  +F+ + I K  L  D  AY
Sbjct: 650 IVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI-ICKEGLYADCIAY 708

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +++G  K G++     L  ++    + P+  +YNI++ G    GQ+ +   L+ DM +
Sbjct: 709 NSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 768

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
               PD +T+ +LI G         + E+  K  EK V+ ++ +
Sbjct: 769 EGIKPDNVTYRLLIFGLCEYG----LIEIAVKFLEKMVLEESGL 808



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 249/538 (46%), Gaps = 50/538 (9%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V +++ L+  + K       K   +R+  +G+ PN   Y  L+  FCK G        
Sbjct: 422 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 481

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  I RS    N+   N+L+   + E  I EA      +       +V ++N +I+  C+
Sbjct: 482 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 541

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+ + A ++++ M            P+  TY +++ GLC+ G + +AK   + + ++  
Sbjct: 542 RGNVLEAFSVYDNMVRHGWP------PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKAC 595

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             D  T N+L+ G+C     +EA  L  +M+ + + P   T+ +++D  CK  K+  A  
Sbjct: 596 AIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALI 655

Query: 299 LLDLMVQRGVRPNA------------------------------------CTYNTLMDGF 322
           LL +M+++G+ P+                                       YN++M+G+
Sbjct: 656 LLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGY 715

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              G+IN  E L  +M          SYNIL++GY K  ++   L LYR+MV +GIKP  
Sbjct: 716 LKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDN 775

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEM--QRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           VTY  L  GL E   +E A+K  ++M  +  G+      Y   I+  C+ G I  A EL 
Sbjct: 776 VTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELK 835

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             ++ L       A + ++ GLCK G+++ A  +F S+    +VP + T+  ++ GLC +
Sbjct: 836 EDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKE 895

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
            ++D A  L   ME      DV+T+++LI G           +L  +MK K ++P+ +
Sbjct: 896 FKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNIT 953



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 239/493 (48%), Gaps = 25/493 (5%)

Query: 93  FP-NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           FP ++ T NI++N  C  G++S       + +++C  PNA T+N+++     + R   A 
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRCKSAL 284

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +   ++  G E ++ TYN +I+ LC+   +  A  L + M   N        P+  +Y+
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN------LTPDECSYN 338

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           T+I G   EG ++ A  +F QM  +++ P V TY +LI G C     +EA+R+  EM   
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           GV+P               R++ +A ++L  M+  G+ P+  TY+ L++G C MG I+  
Sbjct: 399 GVRP---------------REVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHET 443

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
           +E+   M+  G   ++V Y  L+  +CK    +EAL  + ++   G+    V +N L   
Sbjct: 444 KEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCS 503

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
            +    +  A +    M R  ++ D  ++   ID  C+ G ++EA  ++  +       D
Sbjct: 504 FYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 563

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  Y  L+ GLC+ G L  A E    L       +  T N ++ G+C  G +D+A DL  
Sbjct: 564 ICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE 623

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M      PD  T+ +L+ GF +  +      LL  M EK ++PD    + +++ LV NE
Sbjct: 624 KMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLV-NE 682

Query: 572 ISLKSLPSFLVQE 584
             +K+  S++ QE
Sbjct: 683 GQVKA-ASYMFQE 694



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 244/486 (50%), Gaps = 12/486 (2%)

Query: 73  LLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           ++A   + K Y +R+  +    ++ ++N +I+ +C+ G V   F  +  ++R  + P+  
Sbjct: 509 MIAEAEQFKQYMSRMKISF---DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 565

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
           T+ SL++GL     +++A      L    C  +  T NTL+ G+C+ G    AL+L E+M
Sbjct: 566 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 625

Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              N        P+T TY+ ++DG CK G +  A  L   M ++ + PD + Y  L++GL
Sbjct: 626 VTRN------ILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGL 679

Query: 253 CHANDWNEAKRLFIEMM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
            +      A  +F E++  +G+    + +N +M+   K  +++E  RL+  M +  V P+
Sbjct: 680 VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPS 739

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
           + +YN LM G+   G+++R   L+  M   G K D+V+Y +LI G C+   +E A+    
Sbjct: 740 SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 799

Query: 372 EMV--SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           +MV    G++P    Y  L      +  ++ A +L ++M+  GV       ++ + GLCK
Sbjct: 800 KMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK 859

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G + EA+ +F ++        I  +  L+ GLCK  ++  A+ L   +    L  +VVT
Sbjct: 860 CGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVT 919

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           YN++I GLCN   +  A DL+ +M+     P++ T+  L              +LL  ++
Sbjct: 920 YNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 979

Query: 550 EKKVMP 555
           ++ ++P
Sbjct: 980 DRGIVP 985



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 216/450 (48%), Gaps = 22/450 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
           EAF ++D M+R H  PP + ++  LL  L +  H      +   L       +  T N L
Sbjct: 547 EAFSVYDNMVR-HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 605

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           +   CK G +        +++     P+  T+  L+ G     +I+ A  L   +   G 
Sbjct: 606 LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGL 665

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK----PNTVTYSTIIDGLC 218
            P+ I Y  L+NGL   G    A  +F+E         ++CK     + + Y+++++G  
Sbjct: 666 VPDTIAYTCLLNGLVNEGQVKAASYMFQE---------IICKEGLYADCIAYNSMMNGYL 716

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G +++ + L   M +  + P   +YN L+HG       +    L+ +M+ +G++P  V
Sbjct: 717 KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 776

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMV--QRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           T+ +++  LC+   ++ A + L+ MV  + G++P    Y  L++  C +G I+ A EL  
Sbjct: 777 TYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKE 836

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M+++G    +V+ + ++ G CK  +VEEA+ ++  ++  G+ PT+ T+ TL  GL +  
Sbjct: 837 DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 896

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +++ A  L   M+  G+  D  TY   I GLC    I +A++L+  ++      +I  Y 
Sbjct: 897 KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 956

Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            L   +  +G ++   +L   +    +VP+
Sbjct: 957 TLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 210/460 (45%), Gaps = 51/460 (11%)

Query: 180 GHTMIALNLFEEMANGNG-EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA-LFLQMKDEN 237
            HT I   +     + +G E  ++       + T+     K G +DKA   L L+M D  
Sbjct: 39  AHTRIGAGVLPAATSVHGVESSIITVLAMQRWETLSQMAYKSGKLDKAHGKLALRMLDSI 98

Query: 238 INP---DVVT--YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV-------------- 278
           +     D +T  Y   +H L  A   ++A  +   +   G   S +              
Sbjct: 99  VQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPT 158

Query: 279 ---TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
              + +++++   K  K+ +A+  +  M + G + +  + N +++   L+G IN++E ++
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNA--LVG-INKSEYVW 215

Query: 336 GSM-ESMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
             + ES+  K   D  + NI++N  C   ++ +A S+ ++M +  + P  VTYNT+    
Sbjct: 216 LFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWY 274

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  + + AL++ D+M+++G+ AD  TY   ID LCK      A  L + +R +    D 
Sbjct: 275 VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            +YN LI G    G++  A  +F  +    L P+V TY  +I G C +G+ D+AR +  +
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 513 ME--------------------ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           M+                     +   PDVIT+  LI+G  ++    +  E+L +M++  
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 454

Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           V+P+  + + +V    K   + ++L  F+   R G V  S
Sbjct: 455 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANS 494


>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/357 (35%), Positives = 197/357 (55%), Gaps = 22/357 (6%)

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           G +   + V Y+TIIDGLCK+  V+ A  L+ +M  E I+PDV T+NSLI+G C      
Sbjct: 10  GKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLK 69

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +A  LF +M+ + + PSV TF +++D LCK  KM EA  ++ +M++ GV PN  TY ++M
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
           +G+CL+ ++N+ + +F ++  MG   +  SYNI+ING+CK K V EAL L++EM  +GI 
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P  VTY++L  GL +   +   L     M    +   T  Y   ID LCK+ ++ +A+ L
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIAL 246

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
            + ++                     GRLK A ++F  L       N+ TYNIMI GLC 
Sbjct: 247 VKKIK-------------------DQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCK 287

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +G  D+A  L   M++    PD +T++  I      +E  K  +L  KM  + ++ +
Sbjct: 288 EGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGLLKE 344



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 170/349 (48%), Gaps = 28/349 (8%)

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V+ YNT+I+GLC+      A  L+ EM      I     P+  T++++I G C  G + 
Sbjct: 16  DVVMYNTIIDGLCKDKLVNDAYELYSEM------IAEKISPDVATFNSLIYGFCIIGQLK 69

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A  LF QM  +NINP V T+  L+ GLC      EAK +   MM  GV P+VVT+  IM
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           +  C   ++++   +   + + GV PN  +YN +++GFC +  +N A  LF  M   G  
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              V+Y+ LI+G CK+  +   L     MV+  I P  V Y      L + + ++ A+ L
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIAL 246

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
             +++  G   +                   A ++F+ L I    L+IQ YN +I+GLCK
Sbjct: 247 VKKIKDQGRLKN-------------------AQDVFQDLLIKGYSLNIQTYNIMINGLCK 287

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            G    A  L   +    ++P+ VTY   I+ L +  + +KA  LF  M
Sbjct: 288 EGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKM 336



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 54/332 (16%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           +   +N++I GL  +  + +A  L++++ A    P+V T+N+LI G C  G    A  LF
Sbjct: 16  DVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLF 75

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
            +M   N        P+  T++ ++DGLCKEG + +AK++   M  + + P+VVTY S++
Sbjct: 76  SQMVLKN------INPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
            G C  N+ N+ K +F  +   GV P+  ++N++++  CK + ++EA  L   M  RG+ 
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 310 PNACTYNTLMDGFC-------------LM------------------------------- 325
           P   TY++L+DG C             LM                               
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKK 249

Query: 326 ----GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
               G++  A+++F  +   G   +  +YNI+ING CK    +EA +L  +M   GI P 
Sbjct: 250 IKDQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPD 309

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
            VTY T    LF   + E A KLF +M   G+
Sbjct: 310 AVTYETNIRALFHKDENEKAEKLFRKMIARGL 341



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 152/301 (50%), Gaps = 19/301 (6%)

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           V   VV +N I+D LCK++ +++A  L   M+   + P+  T+N+L+ GFC++G++  A 
Sbjct: 13  VNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAF 72

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            LF  M          ++ IL++G CK  +++EA S+   M+  G+ P VVTY ++  G 
Sbjct: 73  GLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGY 132

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
             +++V     +F  + R GVA +T++Y   I+G CK   + EA+ LF+ +         
Sbjct: 133 CLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPIT 192

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA------ 506
             Y+ LIDGLCKS  L         + + ++ P  V Y   I  LC    +DKA      
Sbjct: 193 VTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIALVKK 249

Query: 507 ----------RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
                     +D+F D+     + ++ T++++I+G  +     +   LL KM +  ++PD
Sbjct: 250 IKDQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPD 309

Query: 557 A 557
           A
Sbjct: 310 A 310



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 157/340 (46%), Gaps = 41/340 (12%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
           N+A+ ++  M+    SP  V++FN L+             +A GLF         P++YT
Sbjct: 34  NDAYELYSEMIAEKISPD-VATFNSLIYGFCIIGQLK---DAFGLFSQMVLKNINPSVYT 89

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           + IL++  CK G++         +++    PN  T+ S+++G    + + +   +F  + 
Sbjct: 90  FTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTIS 149

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  PN  +YN +ING C+      AL LF+EM       G+V  P TVTYS++IDGLC
Sbjct: 150 RMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCR----GIV--PITVTYSSLIDGLC 203

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K   +       + M +  I P  V Y   I  LC +N  ++A  L  ++ DQG      
Sbjct: 204 KSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIALVKKIKDQG------ 254

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
                        ++  A  +   ++ +G   N  TYN +++G C  G  + AE L   M
Sbjct: 255 -------------RLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKM 301

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +  G   D V+Y   I       E E+A  L+R+M+++G+
Sbjct: 302 DDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGL 341



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 96/175 (54%)

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
           D+++   V +D   Y T IDGLCK+  + +A EL+  +   K   D+  +N LI G C  
Sbjct: 6   DQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCII 65

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G+LK A+ LF  +    + P+V T+ I++ GLC +G+M +A+ +   M ++   P+V+T+
Sbjct: 66  GQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTY 125

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
             ++ G+  +NE +K   +   +    V P+    +I+++   K +I  ++L  F
Sbjct: 126 TSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILF 180



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 105/199 (52%)

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
           ++  K +   VV YNT+  GL +   V  A +L+ EM  + ++ D  T+ + I G C  G
Sbjct: 7   QIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIG 66

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            + +A  LF  + +      +  +  L+DGLCK G++K A  +   +    ++PNVVTY 
Sbjct: 67  QLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYT 126

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +++G C   +++K + +F  +     AP+  +++++I+GF +I   ++   L  +M  +
Sbjct: 127 SIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCR 186

Query: 552 KVMPDASIVSIVVDLLVKN 570
            ++P     S ++D L K+
Sbjct: 187 GIVPITVTYSSLIDGLCKS 205


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 264/574 (45%), Gaps = 59/574 (10%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNK---HYDTRLNATGLFPNLYTYNILINCFCKIGRVS 113
           +L + PS P  S  ++L A     +       RL  TGL P++ +YN LI+ F K G V 
Sbjct: 22  LLMLPPSTPTTSLIDVLPAECTGPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVD 81

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
             +  F +++    +P+  T+NSLI GL     ++++  +  ++   G  PN  TYN+LI
Sbjct: 82  KAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLI 141

Query: 174 NGLCRTGHTMIALNLFEEMA---------NGNGEIGVVC--------------------K 204
            G    G    ++ +F+EM+         N N  I  +C                    K
Sbjct: 142 YGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPK 201

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           PN ++YST++ G   EG      +L   M  + I P+   +N LI+        ++A  +
Sbjct: 202 PNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLI 261

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
           F +M ++G+ P  VTF  ++  LC+  ++D+A    + MV  GV P+   Y  L+ G C 
Sbjct: 262 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN 321

Query: 325 MGKINRAEELFGSMESMGCKHDDVSY-NILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            G++ +A+EL   M +       V Y + +IN   K   V E   +   MV  G +P VV
Sbjct: 322 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVV 381

Query: 384 TYNTLFLGLFEIHQVEHAL--------------------------KLFDEMQRDGVAADT 417
           T+N+L  G   +  +E AL                          K+F EM   G     
Sbjct: 382 TFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSI 441

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
           +TY   + GLC+N    EA  L   L  +  + DI  +N +I  + K GR + A ELF +
Sbjct: 442 QTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAA 501

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    LVP V TYN+MI  L  +   ++A +LF+ +E++  APD    + ++   ++  E
Sbjct: 502 ISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAE 561

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            +K +  L  + E  +  +AS +S++  L  + +
Sbjct: 562 VAKASNYLSIIDENNLTLEASTISLLASLFSRED 595



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 232/475 (48%), Gaps = 34/475 (7%)

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAA-ALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
           +R    P +    SLI  L AE    E A A+F +L   G  P+V +YNTLI+G  + G 
Sbjct: 20  MRLLMLPPSTPTTSLIDVLPAECTGPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGE 79

Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
              A  LF +M      I     P+ VTY+++IDGLCK   + K++ +  QM D  I P+
Sbjct: 80  VDKAYELFYKM------IEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPN 133

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
             TYNSLI+G   A  W E+ R+F EM   G+ P VV  N  +  LC++ ++ EA  + D
Sbjct: 134 NKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFD 193

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            MV +G +PN  +Y+TL+ G+   G       L   M S G   +   +NILIN Y +  
Sbjct: 194 SMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCG 253

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
            +++A+ ++ +M +KG+ P  VT+ T+   L  I +++ AL  F+ M   GV      Y 
Sbjct: 254 MMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYR 313

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKC-ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
             I G C +G +++A EL   +         ++ ++ +I+ L K GR+    ++   +  
Sbjct: 314 CLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQ 373

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDK--------------------------ARDLFLDME 514
               PNVVT+N +++G C  G M++                          A+ +F +M 
Sbjct: 374 TGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMI 433

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           E+     + T+ +++ G  R N   + N LL K+    V  D    +IV+  ++K
Sbjct: 434 ESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLK 488



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 118/229 (51%)

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           E AL+++  ++  G+ P V +YNTL  G  +  +V+ A +LF +M    V+ D  TY + 
Sbjct: 46  ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGLCK   ++++  +   +       + + YN LI G   +G  K +  +F  +    L
Sbjct: 106 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 165

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           +P VV  N  I  LC   ++ +A+D+F  M      P++I++  L+HG+      + +N 
Sbjct: 166 IPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNS 225

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           L++ M  K ++P+    +I+++   +  +  K++  F   + +G + ++
Sbjct: 226 LVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 274


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 261/512 (50%), Gaps = 27/512 (5%)

Query: 64  PPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP   +F +++ SL +N   D       +++       +  YN +I+C  ++GRV     
Sbjct: 235 PPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALH 294

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F ++   C  P+  ++N+++KGL  + R  +A  L   +    C P+ +T+NT+I+ LC
Sbjct: 295 LFDQM--PC-KPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLC 351

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
             G    A+ + E+M          CKP+  TYS +++ L + G VD A  L   +    
Sbjct: 352 HRGLVDCAMEVVEQMPKYG------CKPDNFTYSALVNALSERGCVDDALELLRTIP--- 402

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             P+ V Y S++ GLC A+ W++  +L  EM+   +    VTF +I+D LC+   +D  +
Sbjct: 403 WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGA 462

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +L  M + G  P+   YN+L++GF   G ++ A ELF   ++M CK + V+YN ++ G 
Sbjct: 463 EVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF---KNMSCKRNVVTYNYMLKGL 519

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C+ ++ E+A  L  EMV     P  VT++TL   L +   VE A+++F++M +     + 
Sbjct: 520 CRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNV 579

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y+T I+GL     + +A++L   L  + C+ D   Y+  + GLC++ R + A EL   
Sbjct: 580 IIYSTLINGLSDQECVDDALKL---LNDMPCKPDTICYSAALKGLCRAERWEDAGELILE 636

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P+ VT++I+I  LC+ G ++ A ++   M +    P+V  +  LI+GF    E
Sbjct: 637 MIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFA---E 693

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             +  + L  ++     PD    S  +  L +
Sbjct: 694 QYRAEDALQLLRNMPCEPDTICYSAALKGLCR 725



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 244/510 (47%), Gaps = 24/510 (4%)

Query: 62  PSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P  P   + + LL  L  NK +D      + +  +G  PN  T+ ++I+  C+ G     
Sbjct: 198 PFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRA 257

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                ++ +   T     +N +I  L    R+ EA  LF ++    C+P++ +YNT++ G
Sbjct: 258 MGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKG 314

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LCR G    A  L   M   +      C P+ VT++T+I  LC  G VD A  +  QM  
Sbjct: 315 LCRDGRWEDAGTLIAGMVRKD------CPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPK 368

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
               PD  TY++L++ L      ++A  L   +     +P+ V +  ++  LC+  + D+
Sbjct: 369 YGCKPDNFTYSALVNALSERGCVDDALELLRTI---PWKPNTVCYRSVLKGLCRADRWDD 425

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
             +L+  M++  +  +  T+  ++D  C  G ++   E+   M   GC  D + YN LIN
Sbjct: 426 VGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLIN 485

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+ +N  V++AL L++ M     K  VVTYN +  GL    Q E A KL  EM +D    
Sbjct: 486 GFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLP 542

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T++T I  LC+ G++  A+E+F  +    C  ++  Y+ LI+GL     +  A +L 
Sbjct: 543 NEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLL 602

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +P     P+ + Y+  ++GLC   + + A +L L+M      PD +TF +LI+     
Sbjct: 603 NDMP---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHK 659

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                  E+   M + + MP+  I S +++
Sbjct: 660 GFLESATEVSELMLKYECMPNVFIYSSLIN 689



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 232/482 (48%), Gaps = 38/482 (7%)

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           +R    P A     LIK L A  R+ +A  +    +  G   + +T NTL+ G CR G  
Sbjct: 94  MRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGASERAG-TADAVTRNTLVAGYCRAGGR 152

Query: 183 MI-ALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
           +  A  +   +A +G+ ++        VTY+T++ G C+EG ++ A+ L   M      P
Sbjct: 153 LADAERMLASLALSGSADV--------VTYNTLVAGYCREGRLNDARRLVADMP---FAP 201

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +  T ++L+ GLC   +W++A+ L  EM+  G  P+ +TF +I+  LC+N   D A  +L
Sbjct: 202 NSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVL 261

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M +         YN ++     +G++  A  LF   + M CK D  SYN ++ G C++
Sbjct: 262 DQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLF---DQMPCKPDIFSYNTVMKGLCRD 318

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              E+A +L   MV K   P  VT+NT+   L     V+ A+++ ++M + G   D  TY
Sbjct: 319 GRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTY 378

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           +  ++ L + G + +A+EL RT   +  + +   Y  ++ GLC++ R     +L   +  
Sbjct: 379 SALVNALSERGCVDDALELLRT---IPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIR 435

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             L  + VT+ ++I  LC  G +D   ++  +M +   +PD+I ++ LI+GF        
Sbjct: 436 NQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDD 495

Query: 541 VNELLHKMKEKK----------------VMPDAS--IVSIVVDLLVKNEISLKSLPSFLV 582
             EL   M  K+                   DA   +  +V D  + NE++  +L S+L 
Sbjct: 496 ALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLC 555

Query: 583 QE 584
           Q+
Sbjct: 556 QK 557



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 212/440 (48%), Gaps = 23/440 (5%)

Query: 48  NEAFCIFDYM--LRMHPSPPPVSSFNILLASLAKNKHYDT--RLNATGLFPNL----YTY 99
           +E  C+ D +  LR  P  P    +  +L  L +   +D   +L A  +   L     T+
Sbjct: 386 SERGCVDDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTF 445

Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            ++I+C C+ G V  G      + +   +P+   +NSLI G      + +A  LF   K 
Sbjct: 446 GLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF---KN 502

Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
             C+ NV+TYN ++ GLCR      A  L  EM          C PN VT+ST+I  LC+
Sbjct: 503 MSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDE------CLPNEVTFSTLISYLCQ 556

Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
           +GFV+ A  +F +M   N  P+V+ Y++LI+GL      ++A +L   + D   +P  + 
Sbjct: 557 KGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKL---LNDMPCKPDTIC 613

Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
           ++  +  LC+  + ++A  L+  M+++   P+  T++ L++  C  G +  A E+   M 
Sbjct: 614 YSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELML 673

Query: 340 SMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
              C  +   Y+ LING+ +    E+AL L R M     +P  + Y+    GL    + E
Sbjct: 674 KYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM---PCEPDTICYSAALKGLCRAKRWE 730

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            A +L  EM R     D  T++  I  LC+NG +  A E+F  + +  C  + + ++ L+
Sbjct: 731 DARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLV 790

Query: 460 DGLCKSGRLKFAWELFCSLP 479
           +G  +  R+    +L  S+P
Sbjct: 791 NGYSEQRRVDEGLKLLSSMP 810



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 155/323 (47%), Gaps = 10/323 (3%)

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N  +H L H  D  +A  L +E M    +P+ V   +++ +LC   ++D+A R+L    +
Sbjct: 72  NQRLHHLVHLGD-LDAALLLVESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLG-ASE 129

Query: 306 RGVRPNACTYNTLMDGFCLM-GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
           R    +A T NTL+ G+C   G++  AE +  S+   G   D V+YN L+ GYC+   + 
Sbjct: 130 RAGTADAVTRNTLVAGYCRAGGRLADAERMLASLALSG-SADVVTYNTLVAGYCREGRLN 188

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
           +A  L  +M      P   T +TL  GL    + + A +L  EM R G   +  T+   I
Sbjct: 189 DARRLVADM---PFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMII 245

Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
             LC+NG    A+ +   +   +C   +  YN +I  L + GR++ A  LF  +P     
Sbjct: 246 HSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP---CK 302

Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
           P++ +YN +++GLC DG+ + A  L   M      PD +TF+ +I             E+
Sbjct: 303 PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEV 362

Query: 545 LHKMKEKKVMPDASIVSIVVDLL 567
           + +M +    PD    S +V+ L
Sbjct: 363 VEQMPKYGCKPDNFTYSALVNAL 385


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 238/452 (52%), Gaps = 18/452 (3%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            +PN  TFN +IK +     + +A  +F  +    CEP+V TY TL++GLC+      A+
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
           +L +EM          C P+ VT++ +I+GLCK+G + +A  L   M  +   P+ VTYN
Sbjct: 255 SLLDEMQIDG------CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYN 308

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +LIHGLC      +A  L   M+     P+VVT+  I++ L K  +  + + +L LM +R
Sbjct: 309 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           G   N   Y+TL+ G    GK   A  LF  M   G + + + Y+ +I+G C++ + ++A
Sbjct: 369 GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDA 428

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           + +  EM +KG  P   T ++L  G FE      A++++ +M +     +   Y+  I G
Sbjct: 429 VEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHG 488

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF----CSLPHGV 482
           LCK+G + EA+ ++  +    C+ D+ AY+ +I+GL  +G ++ A +L+    C  P   
Sbjct: 489 LCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQ 548

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI-RINEPSKV 541
             P+VVTYNI++  LC    + +A DL   M +    PD++T  + +     +++ P   
Sbjct: 549 --PDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDG 606

Query: 542 NELLHK-----MKEKKVMPDASIVSIVVDLLV 568
            E L +     +K ++V+  + IV +++  L+
Sbjct: 607 REFLDELVVRLLKRQRVLGASKIVEVMLQKLL 638



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 243/528 (46%), Gaps = 30/528 (5%)

Query: 68  SSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF 127
           S+  I    L   +H +T     G+ P+    + +     K+G   LG   F  ++ +  
Sbjct: 42  STKTIETEPLNHTQHCNTTDQENGIEPDPPISDKIFKSGPKMGSYRLGDSTFYSLINN-- 99

Query: 128 TPNAATFNSLIKGL---HAESRIMEAAALFTKLKAFG--------------------CEP 164
             N   F SL K L     E R++         KA+G                    C+ 
Sbjct: 100 YANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKR 159

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
              ++N+++N + + G    AL  +  +    G  GV   PN +T++ +I  +CK G VD
Sbjct: 160 TGKSFNSVLNVIIQEGLFHRALEFYNHVI---GAKGVSISPNVLTFNLVIKAMCKVGLVD 216

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A  +F  M      PDV TY +L+ GLC A+  +EA  L  EM   G  PS VTFNV++
Sbjct: 217 DAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLI 276

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           + LCK   +  A++L+D M  +G  PN  TYNTL+ G CL GK+ +A  L   M S  C 
Sbjct: 277 NGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCV 336

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            + V+Y  +ING  K     +   +   M  +G       Y+TL  GLF+  + + A+ L
Sbjct: 337 PNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHL 396

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           F EM   G   +T  Y+  IDGLC++G   +AVE+   +    C  +    + L+ G  +
Sbjct: 397 FKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFE 456

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +G    A E++  +       N V Y+++I GLC DG++ +A  ++  M      PDV+ 
Sbjct: 457 AGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVA 516

Query: 525 FDMLIHGFIRINEPSKVNELLHKM--KEKKVMPDASIVSIVVDLLVKN 570
           +  +I+G           +L ++M  +     PD    +I+++ L K 
Sbjct: 517 YSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQ 564



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 157/368 (42%), Gaps = 86/368 (23%)

Query: 32  FRDLTTREGDINVIT-------------PNEAFCIFDYMLRMHPSPPPVSSFNILLASLA 78
           FRD+T R+ + +V T              +EA  + D M      P PV+ FN+L+  L 
Sbjct: 222 FRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT-FNVLINGLC 280

Query: 79  KNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAA 132
           K                 G  PN  TYN LI+  C  G++        R++ S   PN  
Sbjct: 281 KKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVV 340

Query: 133 TF-----------------------------------NSLIKGLHAESRIMEAAALFTKL 157
           T+                                   ++LI GL  E +  EA  LF ++
Sbjct: 341 TYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEM 400

Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN--------------------GNG 197
              G E N I Y+ +I+GLCR G    A+ +  EM N                    GN 
Sbjct: 401 TVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNS 460

Query: 198 EIGV-VCK--------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              V V K         N V YS +I GLCK+G V +A  ++ QM  +   PDVV Y+S+
Sbjct: 461 HRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSM 520

Query: 249 IHGLCHANDWNEAKRLFIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           I+GL  A    +A +L+ EM+ QG   QP VVT+N++++ LCK   +  A  LL+ M+ R
Sbjct: 521 INGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDR 580

Query: 307 GVRPNACT 314
           G  P+  T
Sbjct: 581 GCDPDLVT 588



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 29/271 (10%)

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL 141
           H    +   G   N   Y+ +I+  C+ G+          +     TPNA T +SL+KG 
Sbjct: 395 HLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGF 454

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                   A  ++  +       N + Y+ LI+GLC+ G    A+ ++ +M      +G 
Sbjct: 455 FEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQM------LGK 508

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM--KDENINPDVVTYNSLIHGLCHANDWN 259
            CKP+ V YS++I+GL   G V+ A  L+ +M  +  +  PDVVTYN L++ LC  +  +
Sbjct: 509 GCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSIS 568

Query: 260 EAKRLFIEMMDQGVQPSVVTFNV-----------------IMDELC----KNRKMDEASR 298
            A  L   M+D+G  P +VT  +                  +DEL     K +++  AS+
Sbjct: 569 RAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASK 628

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
           ++++M+Q+ + P   T+  +++  C   K+ 
Sbjct: 629 IVEVMLQKLLPPKHSTWARVVENLCKPKKVQ 659



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 134/278 (48%), Gaps = 4/278 (1%)

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           T+ +L++ +  +G     E++   M+       +  + ++   Y K    E+A+ L+  M
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 374 VSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM---QRDGVAADTRTYTTFIDGLCK 429
             +   K T  ++N++   + +      AL+ ++ +   +   ++ +  T+   I  +CK
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G + +A+++FR + I KCE D+  Y  L+DGLCK+ R+  A  L   +      P+ VT
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 271

Query: 490 YNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK 549
           +N++I GLC  G + +A  L  +M      P+ +T++ LIHG     +  K   LL +M 
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 331

Query: 550 EKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
             K +P+      +++ LVK   +L       + E +G
Sbjct: 332 SSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 235/485 (48%), Gaps = 7/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN LI    K G        +  +      P+  T++ L+     +  
Sbjct: 173 MKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAF-GKRD 231

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +     L  +++  G +PNV +Y   I  L + G    A  + ++M +        CKP+
Sbjct: 232 VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEG------CKPD 285

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VT + +I  LC  G V  AK +F +MK  +  PD VTY +L+       D      ++ 
Sbjct: 286 VVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWN 345

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G   +VV +  ++D LC+  ++DEAS + D M Q+G+ P   +YN+L+ GF    
Sbjct: 346 AMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKAD 405

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           ++N A ELF  M   G   +  +Y + IN Y K+ E  +A+  Y  M SKGI P VV  N
Sbjct: 406 RLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGN 465

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +   L +  ++  A ++F E++  GV  D  TYT  I    K     EA+++F  +   
Sbjct: 466 AVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIET 525

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           +C  D+ A N LID L K+GR   AW++F  L    L P   TYN ++ GL  +G++ + 
Sbjct: 526 RCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEV 585

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M  N+  P++IT++ ++    +  E +    +L+ M  K  MPD S  +  +  
Sbjct: 586 MHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHG 645

Query: 567 LVKNE 571
           LVK +
Sbjct: 646 LVKED 650



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 248/510 (48%), Gaps = 14/510 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N +L SLAK+      K     L + G+ P+  TY ++I C  K          
Sbjct: 459 PDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKV 518

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ +   P+    NSLI  L+   R  EA  +F +LK    +P   TYNTL+ GL R
Sbjct: 519 FSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGR 578

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     ++L EEM N N        PN +TY+T++D LCK G V+ A  +   M  +  
Sbjct: 579 EGKVKEVMHLLEEM-NSNS-----YPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGC 632

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ +YN+ +HGL   +   EA R+F +M  + + P   T   I+    KN  M+EA  
Sbjct: 633 MPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGLMNEALH 691

Query: 299 LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            L + ++Q G + +  ++++LM+G      + ++ E   ++       DD   + LI   
Sbjct: 692 TLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHL 751

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+K+  EA  L ++  S G+     +YN L  GL + + ++ A  LF EM+R G   D 
Sbjct: 752 CKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDE 811

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   +D + K+  I + +++ + +     E     YN +I GL KS  L  A +L+  
Sbjct: 812 FTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYK 871

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L      P   TY  ++ GL  DG+++ A DLF +M +    P+   +++L++G+     
Sbjct: 872 LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGN 931

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             KV EL   M ++ + PD    ++++  L
Sbjct: 932 TEKVCELFQNMVDQGINPDIKSYTVLIGAL 961



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 249/528 (47%), Gaps = 52/528 (9%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
            NEA+ IF  +  M+  P   + +N LLA L +        H    +N+    PNL TYN 
Sbjct: 548  NEAWKIFHELKEMNLDPTDCT-YNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNT 606

Query: 102  LINCFCKIGRV--SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
            +++C CK G V  +LG + +   ++ C  P+ +++N+ + GL  E R+ EA  +F ++K 
Sbjct: 607  VLDCLCKNGEVNYALGML-YNMTMKGCM-PDLSSYNTALHGLVKEDRLTEAFRIFCQMKK 664

Query: 160  FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
                P+  T  T++    + G    AL+  +E     G      K +  ++ ++++G+ K
Sbjct: 665  V-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGS-----KADRSSFHSLMEGILK 718

Query: 220  EGFVDK-----------------------------------AKALFLQMKDENINPDVVT 244
               ++K                                   A  L  + +   ++    +
Sbjct: 719  RAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGS 778

Query: 245  YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
            YN+LI GL   N  + A+ LF EM   G  P   T+N+I+D + K+ ++++  ++   M 
Sbjct: 779  YNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMH 838

Query: 305  QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
             +G      TYNT++ G      +  A +L+  + S G      +Y  L++G  K+ ++E
Sbjct: 839  CKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIE 898

Query: 365  EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
            +A  L+ EM+  G KP    YN L  G       E   +LF  M   G+  D ++YT  I
Sbjct: 899  DAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLI 958

Query: 425  DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
              LC  G + +++  FR L  L  E D+  YN LI GL +SGRL+ A  LF  +    + 
Sbjct: 959  GALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIA 1018

Query: 485  PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            PN+ TYN +I  L  +G+  +A  ++ ++ +N   P+V T++ LI G+
Sbjct: 1019 PNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGY 1066



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 248/500 (49%), Gaps = 19/500 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++++L+ +  K +  +T       +   G+ PN+Y+Y I I    + GR    +  
Sbjct: 215 PSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKI 273

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++      P+  T   LI+ L    R+ +A  +F K+KA   +P+ +TY TL++    
Sbjct: 274 LQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGD 333

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
            G +   + ++  M A+G  +       N V Y+ ++D LC+ G VD+A  +F QMK + 
Sbjct: 334 NGDSRSVIEIWNAMKADGYND-------NVVAYTAVVDALCQVGRVDEASDVFDQMKQKG 386

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P   +YNSLI G   A+  N A  LF  M   G  P+  T+ + ++   K+ +  +A 
Sbjct: 387 IEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAI 446

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +  +LM  +G+ P+    N ++      G++  A+ +F  ++S+G   D+++Y ++I   
Sbjct: 447 KRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCC 506

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K    +EA+ ++ EM+     P V+  N+L   L++  +   A K+F E++   +    
Sbjct: 507 SKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + GL + G + E + L   +       ++  YN ++D LCK+G + +A  +  +
Sbjct: 567 CTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYN 626

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P++ +YN  + GL  + ++ +A  +F  M++   APD  T   ++  F++   
Sbjct: 627 MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKK-VLAPDYTTLCTILPSFVK--- 682

Query: 538 PSKVNELLHKMKEKKVMPDA 557
              +NE LH +KE  + P +
Sbjct: 683 NGLMNEALHTLKEYILQPGS 702



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 229/507 (45%), Gaps = 49/507 (9%)

Query: 64   PPPVSSFNILLASLAKNKHYDTRL----NAT--GLFPNLYTYNILINCFCKIGRVSLGFI 117
            PP + ++N +L  L KN   +  L    N T  G  P+L +YN  ++   K  R++  F 
Sbjct: 598  PPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFR 657

Query: 118  AFGRILRSCFTPNAATFNSLI----------KGLHA-ESRIMEAAALFTK---------- 156
             F + ++    P+  T  +++          + LH  +  I++  +   +          
Sbjct: 658  IFCQ-MKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGI 716

Query: 157  LKAFGCEPNV---------------ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
            LK  G E ++                  + LI  LC++   + A  L ++  +    +GV
Sbjct: 717  LKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFES----LGV 772

Query: 202  VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              K  T +Y+ +I GL  E  +D A+ LF +MK    +PD  TYN ++  +  +    + 
Sbjct: 773  SLK--TGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDM 830

Query: 262  KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             ++  EM  +G + + VT+N I+  L K++ + EA  L   ++  G  P  CTY  L+DG
Sbjct: 831  LKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDG 890

Query: 322  FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
                GKI  AE+LF  M   GCK +   YNIL+NGY      E+   L++ MV +GI P 
Sbjct: 891  LLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPD 950

Query: 382  VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            + +Y  L   L    ++  +L  F ++   G+  D  TY   I GL ++G + EAV LF 
Sbjct: 951  IKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFN 1010

Query: 442  TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             +       ++  YN LI  L K G+   A +++  L      PNV TYN +I G    G
Sbjct: 1011 DMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSG 1070

Query: 502  QMDKARDLFLDMEENAAAPDVITFDML 528
              D A   +  M      P+  T+  L
Sbjct: 1071 STDNAFASYGQMIVGGCPPNSSTYMQL 1097



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 246/531 (46%), Gaps = 17/531 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
           +EA  +FD M +     P   S+N L++   K    +        +N  G  PN YTY +
Sbjct: 373 DEASDVFDQM-KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVL 431

Query: 102 LINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            IN + K G  SL  I    +++S    P+    N+++  L    R+  A  +F +LK+ 
Sbjct: 432 FINYYGKSGE-SLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSI 490

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P+ ITY  +I    +  +   A+ +F EM      I   C P+ +  +++ID L K 
Sbjct: 491 GVCPDNITYTMMIKCCSKASNADEAMKVFSEM------IETRCVPDVLAVNSLIDTLYKA 544

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G  ++A  +F ++K+ N++P   TYN+L+ GL       E   L  EM      P+++T+
Sbjct: 545 GRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITY 604

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N ++D LCKN +++ A  +L  M  +G  P+  +YNT + G     ++  A  +F  M+ 
Sbjct: 605 NTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKK 664

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           +    D  +   ++  + KN  + EAL   +E ++  G K    ++++L  G+ +   +E
Sbjct: 665 V-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGME 723

Query: 400 HALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLI 459
            +++  + +    +  D    +  I  LCK+   +EA EL +    L   L   +YN LI
Sbjct: 724 KSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALI 783

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            GL     +  A  LF  +      P+  TYN+++  +    +++    +  +M      
Sbjct: 784 CGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYE 843

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              +T++ +I G ++     +  +L +K+  +   P       ++D L+K+
Sbjct: 844 STYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKD 894



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 181/403 (44%), Gaps = 36/403 (8%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           + K N  T+ TI   L  EG +  A      MK+  I  +  TYN LI+ L  +    EA
Sbjct: 142 IVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREA 201

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             ++  M   G+ PSV T++V+M    K R ++    LL  M   GV+PN  +Y   +  
Sbjct: 202 MEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRV 260

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
               G+   A ++   ME  GCK D V+  +LI   C    V +A  ++ +M +   KP 
Sbjct: 261 LGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPD 320

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            VTY TL     +       +++++ M+ DG   +   YT  +D LC+ G + EA ++F 
Sbjct: 321 RVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFD 380

Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL------PHGV------------- 482
            ++    E    +YN LI G  K+ RL  A ELF  +      P+G              
Sbjct: 381 QMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSG 440

Query: 483 ----------------LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
                           +VP+VV  N ++  L   G++  A+ +F +++     PD IT+ 
Sbjct: 441 ESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYT 500

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           M+I    + +   +  ++  +M E + +PD   V+ ++D L K
Sbjct: 501 MMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYK 543



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 15/321 (4%)

Query: 41   DINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFP 94
            D N+I   E   +F  M R+   P   + +N++L ++ K+   +  L         G   
Sbjct: 788  DENLIDVAEG--LFSEMKRLGCDPDEFT-YNLILDAMGKSMRIEDMLKVQKEMHCKGYES 844

Query: 95   NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
               TYN +I+   K   +      + +++   F+P   T+  L+ GL  + +I +A  LF
Sbjct: 845  TYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLF 904

Query: 155  TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             ++  +GC+PN   YN L+NG    G+T     LF+ M +          P+  +Y+ +I
Sbjct: 905  DEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQG------INPDIKSYTVLI 958

Query: 215  DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
              LC  G ++ + + F Q+ +  + PD++TYN LIHGL  +    EA  LF +M   G+ 
Sbjct: 959  GALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIA 1018

Query: 275  PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
            P++ T+N ++  L K  K  EA ++ + +++ G +PN  TYN L+ G+ + G  + A   
Sbjct: 1019 PNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFAS 1078

Query: 335  FGSMESMGCKHDDVSYNILIN 355
            +G M   GC  +  +Y  L N
Sbjct: 1079 YGQMIVGGCPPNSSTYMQLPN 1099



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 155/327 (47%), Gaps = 1/327 (0%)

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           ++F  M  Q V+ +V TF  I   L     +  A   L +M + G+  N+ TYN L+   
Sbjct: 133 QVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFL 192

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
              G    A E++  M + G      +Y++L+  + K ++VE  + L REM   G+KP V
Sbjct: 193 VKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNV 251

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            +Y      L +  + E A K+  +M+ +G   D  T T  I  LC  G + +A ++F  
Sbjct: 252 YSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWK 311

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           ++    + D   Y  L+D    +G  +   E++ ++       NVV Y  ++  LC  G+
Sbjct: 312 MKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGR 371

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D+A D+F  M++    P   +++ LI GF++ +  +   EL + M      P+     +
Sbjct: 372 VDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVL 431

Query: 563 VVDLLVKNEISLKSLPSFLVQERQGEV 589
            ++   K+  SLK++  + + + +G V
Sbjct: 432 FINYYGKSGESLKAIKRYELMKSKGIV 458



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 15/246 (6%)

Query: 49   EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNI 101
            EA  ++  ++    SP P + +  LL  L K+         +D  L+  G  PN   YNI
Sbjct: 864  EAMDLYYKLMSEGFSPTPCT-YGPLLDGLLKDGKIEDAEDLFDEMLD-YGCKPNRAIYNI 921

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            L+N +   G        F  ++     P+  ++  LI  L    R+ ++ + F +L   G
Sbjct: 922  LLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELG 981

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             EP++ITYN LI+GL R+G    A++LF +M            PN  TY+++I  L KEG
Sbjct: 982  LEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG------IAPNLYTYNSLILYLGKEG 1035

Query: 222  FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
               +A  ++ ++      P+V TYN+LI G   +   + A   + +M+  G  P+  T+ 
Sbjct: 1036 KAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYM 1095

Query: 282  VIMDEL 287
             + ++L
Sbjct: 1096 QLPNQL 1101


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 227/477 (47%), Gaps = 18/477 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P+ YTYN ++   C   +          ++R+   PN  TF + I+       +  A  L
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
             ++  +GC P+V+ Y+TLING    GH   AL+L   M         +CKPNTV Y+  
Sbjct: 65  LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---------LCKPNTVCYNAA 115

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           + GLC     +    L  +M  +  +P+  T++ LI  LC  N  + A  +  +M   G 
Sbjct: 116 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 175

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
           +P  V +N+I++ L +  ++D+A RLL+ MV    +P+A  +N ++ GFC   + + A E
Sbjct: 176 EPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASE 232

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           L   M    C   ++++NILI+  C+N  V  A  ++ +M      P +VTY++L  G  
Sbjct: 233 LIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 292

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           E   VE A++LF  M       D  +Y   + GLC+     +A EL   +    C  +  
Sbjct: 293 EQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 349

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            +N LI+ LC+ G +  A E+   +P+    P++ TYN +I G    G++D A  L   M
Sbjct: 350 TFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM 409

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
              +  PD I+++  + G  R        EL+ +M   K  P+         LL+ N
Sbjct: 410 ---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPN 463



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 226/430 (52%), Gaps = 18/430 (4%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
            P+  T+N+++KGL    +  EA  L  ++    C PN +T+ T I   C+ G    A+ 
Sbjct: 4   APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 63

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L ++M          C P+ V YST+I+G  ++G VD+A  L   M      P+ V YN+
Sbjct: 64  LLDQMPRYG------CTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 114

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            + GLC A  W +   L  EM+ +G  P+  TF++++  LC+N  +D A  +L+ M + G
Sbjct: 115 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 174

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+   YN +++     G+++ A  L   + SM CK D + +N ++ G+C+ +   +A 
Sbjct: 175 CEPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDAS 231

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L  +M         +T+N L   L +   V +A ++F++M R     D  TY++ ++G 
Sbjct: 232 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 291

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            + G +  A++LFR++    C+ DI +YN ++ GLC++ R + A EL   +      PN 
Sbjct: 292 SEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 348

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           VT+NI+I  LC  G +D+A ++   M    + PD+ T++ LI+GF   +E  ++++ L  
Sbjct: 349 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF---SEQGRLDDALKL 405

Query: 548 MKEKKVMPDA 557
           +      PDA
Sbjct: 406 LSTMSCKPDA 415



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 175/328 (53%), Gaps = 23/328 (7%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P  ++F++L++SL +N   D+      ++   G  P+   YNI+IN   + GRV      
Sbjct: 142 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL-- 199

Query: 119 FGRILRSCF-TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
             R+L S    P+A  FN+++KG     R  +A+ L  ++    C    +T+N LI+ LC
Sbjct: 200 --RLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLC 257

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           + G    A  +FE+M          C P+ VTYS++++G  ++G V+ A  LF  M    
Sbjct: 258 QNGLVNYATQVFEQMPRYR------CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP--- 308

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PD+ +YN+++ GLC A  W +A  L  EM+ +   P+ VTFN++++ LC+   +D A 
Sbjct: 309 CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAI 368

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            +L+ M   G  P+  TYN L++GF   G+++ A +L   + +M CK D +SYN  + G 
Sbjct: 369 EVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL---LSTMSCKPDAISYNSTLKGL 425

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTY 385
           C+ +  ++A  L  EM+     P  VT+
Sbjct: 426 CRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 181/411 (44%), Gaps = 54/411 (13%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL---NATGLFPNLYTYNILIN 104
           + A  + D M R +   P V  ++ L+   ++  H D  L   N     PN   YN  + 
Sbjct: 59  DRAVQLLDQMPR-YGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALK 117

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             C   R          ++R   +PN ATF+ LI  L   + +  A  +  +++ +GCEP
Sbjct: 118 GLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEP 177

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV---------------- 208
           + + YN +IN L   G    AL L   M         VCKP+ +                
Sbjct: 178 DTVNYNIIINSLSERGRVDDALRLLNSM---------VCKPDALGFNAVLKGFCRAERWH 228

Query: 209 -------------------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
                              T++ +ID LC+ G V+ A  +F QM      PD+VTY+SL+
Sbjct: 229 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 288

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
           +G         A +LF  M     +P + ++N ++  LC+  + ++A  L+  MV +   
Sbjct: 289 NGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCP 345

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  T+N L++  C  G ++RA E+   M + G   D  +YN LING+ +   +++AL L
Sbjct: 346 PNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL 405

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              M     KP  ++YN+   GL    + + A +L  EM R+    +  T+
Sbjct: 406 LSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 178/364 (48%), Gaps = 38/364 (10%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           + PD  TYN+++ GLC A  W EA+ L  EM+     P+ VTF   +   C+N  +D A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +LLD M + G  P+   Y+TL++GF   G +++A +L   + +M CK + V YN  + G 
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGL 119

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           C  +  E+   L  EMV KG  P   T++ L   L + + V+ A+++ ++M++ G   DT
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTL----------RILK-------------------- 447
             Y   I+ L + G + +A+ L  ++           +LK                    
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFR 239

Query: 448 --CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
             C L    +N LID LC++G + +A ++F  +P     P++VTY+ ++ G    G ++ 
Sbjct: 240 DDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEV 299

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  LF  M      PD+ +++ ++ G  R        EL+ +M  K   P+    +I+++
Sbjct: 300 AIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILIN 356

Query: 566 LLVK 569
            L +
Sbjct: 357 SLCQ 360



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 53/268 (19%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNATGLFPNLY---------TYNILINCFCKIGRVSLG 115
           P    FN +L    + + +    +A+ L   ++         T+NILI+  C+ G V+  
Sbjct: 209 PDALGFNAVLKGFCRAERWH---DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYA 265

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
              F ++ R   TP+  T++SL+ G   +  +  A  LF   ++  C+P++ +YN ++ G
Sbjct: 266 TQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RSMPCKPDIFSYNAVLKG 322

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LCR      A  L  EM      +G  C PN VT++ +I+ LC++G VD+A  +  QM +
Sbjct: 323 LCRAARWEDAGELIAEM------VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPN 376

Query: 236 ENINPDVVTYNSL--------------------------------IHGLCHANDWNEAKR 263
               PD+ TYN+L                                + GLC A  W +A+ 
Sbjct: 377 YGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEE 436

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           L  EM+     P+ VTF      L  NR
Sbjct: 437 LVAEMLRNKCTPNEVTFKYANHLLMPNR 464


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 253/548 (46%), Gaps = 66/548 (12%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFP--NLYTYNILINCFCKIGRVSLG 115
           L +  + P V + NILL +L      +         P  N +++ IL   +C+ GR    
Sbjct: 141 LLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPERNEFSFGILARGYCRAGR---S 197

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
             A G +L S  T N    N+++ G   E ++ EA  L  +++  G  PNV+T+N  I+ 
Sbjct: 198 MDALG-VLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISA 256

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LC+ G  + A  +F +M     E G+  +P+ VT+  ++ G C+ G VD+A+ L   M+ 
Sbjct: 257 LCKAGRVLDAYRIFNDMQE-KWERGLP-RPDQVTFDVMLSGFCEAGMVDEARVLVDIMRC 314

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN----- 290
                 V +YN  + GL       EA+ L  EM  +GVQP+  T+N+I+D LCK      
Sbjct: 315 GGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFD 374

Query: 291 -RKMDE-----------------------------ASRLLDLMVQRGVRPNACTYNTLMD 320
            RK+++                             A+R+LD M Q+G  PN+ TYN L+ 
Sbjct: 375 VRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQ 434

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG--- 377
                G+I  AE L   M   G   D  S NI+I+G C+N +++ A+ +   M ++G   
Sbjct: 435 SLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLA 494

Query: 378 --------------------IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
                                 P  +TY+TL   L +  + + A K   EM    ++ D+
Sbjct: 495 LGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDS 554

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             Y TFI G CK+G    AV++ R +    C+   + YN LI G  +        +L   
Sbjct: 555 VLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISE 614

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + PNV+TYN +I+  C  G ++KA  L  +M +N   P++ +F++LI  F + ++
Sbjct: 615 MKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSD 674

Query: 538 PSKVNELL 545
            S    + 
Sbjct: 675 FSAAQRVF 682



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 225/479 (46%), Gaps = 48/479 (10%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           +N L+     E+R     +L+  L   G  P+V T N L+  LC  G   +A  +F+ M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177

Query: 194 NGNG-EIGVVCKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFLQ 232
             N    G++ +                     N V  +T++ G C+EG VD+A+ L  +
Sbjct: 178 ERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVER 237

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG----VQPSVVTFNVIMDELC 288
           M+DE + P+VVT+N+ I  LC A    +A R+F +M ++      +P  VTF+V++   C
Sbjct: 238 MRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFC 297

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +   +DEA  L+D+M   G      +YN  + G    G +  A+EL   M   G + +  
Sbjct: 298 EAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSY 357

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
           +YNI+++G CK  +  +   +   + S  + P VVTY +L            A ++ DEM
Sbjct: 358 TYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEM 417

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
            + G A ++ TY   +  L K G I EA  L   +      LD  + N +IDGLC++ +L
Sbjct: 418 AQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKL 477

Query: 469 KFAWELF------CSLPHGVL-----------------VPNVVTYNIMIQGLCNDGQMDK 505
             A ++        SL  G L                 +P+ +TY+ ++  LC +G+ D+
Sbjct: 478 DMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDE 537

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           A+   L+M     +PD + +D  IHG+ +  + S   ++L  M++K   P     ++++
Sbjct: 538 AKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLI 596



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 234/545 (42%), Gaps = 71/545 (13%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG----RILRSCFTPNAATFNSLIKGL 141
           R+   GL PN+ T+N  I+  CK GRV   +  F     +  R    P+  TF+ ++ G 
Sbjct: 237 RMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGF 296

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                + EA  L   ++  G    V +YN  ++GL R G    A  L  EMA+     GV
Sbjct: 297 CEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHE----GV 352

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
             +PN+ TY+ I+DGLCKEG     + +   +K   + PDVVTY SL+H  C   +   A
Sbjct: 353 --QPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAA 410

Query: 262 KRLFIEMMDQGVQPSVVTFNV-----------------------------------IMDE 286
            R+  EM  +G  P+  T+NV                                   I+D 
Sbjct: 411 NRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDG 470

Query: 287 LCKNRKMDEASRLLDLMVQRG-----------------------VRPNACTYNTLMDGFC 323
           LC+N K+D A  ++D M   G                         P+  TY+TL+   C
Sbjct: 471 LCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALC 530

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G+ + A++    M       D V Y+  I+GYCK+ +   A+ + R+M  KG KP+  
Sbjct: 531 KEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTR 590

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TYN L  G  E H  +  LKL  EM+  G+  +  TY + I   C+ G + +A+ L   +
Sbjct: 591 TYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEM 650

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELF-CSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
              +   +I ++  LI   CK+     A  +F  SL         V Y++M   L   G+
Sbjct: 651 LQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASL--STCGQKEVLYSLMCTQLSTYGR 708

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
             +A ++   + E   +     +  +I G  +++E    + LL  +  K    D +    
Sbjct: 709 WLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMP 768

Query: 563 VVDLL 567
           V+D L
Sbjct: 769 VIDAL 773



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 201/426 (47%), Gaps = 24/426 (5%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++NI++  L K  K +D R     + +  + P++ TY  L++ +C  G  +     
Sbjct: 354 PNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRI 413

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +    PN+ T+N L++ L    RI EA  L  ++   G   +  + N +I+GLCR
Sbjct: 414 LDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCR 473

Query: 179 TGHTMIALNLFEEMANGN----GEIGVV-------------CKPNTVTYSTIIDGLCKEG 221
                +A+++ + M N      G +G               C P+ +TYST++  LCKEG
Sbjct: 474 NNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEG 533

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             D+AK   L+M  ++I+PD V Y++ IHG C     + A ++  +M  +G +PS  T+N
Sbjct: 534 RFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYN 593

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++    +    DE  +L+  M  +G+ PN  TYN+L+  FC  G +N+A  L   M   
Sbjct: 594 LLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQN 653

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
               +  S+ +LI  +CK  +   A  ++   +S   +  V+ Y+ +   L    +   A
Sbjct: 654 EIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVL-YSLMCTQLSTYGRWLEA 712

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           + + + +    ++     Y   I+GLCK   +     L + L +     D  A+  +ID 
Sbjct: 713 MNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDA 772

Query: 462 LCKSGR 467
           L + G+
Sbjct: 773 LSERGK 778



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 40/284 (14%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+  TY+ L++  CK GR          ++    +P++  +++ I G     +   A  
Sbjct: 516 LPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVK 575

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +   ++  GC+P+  TYN LI G     ++   L L  EM  G G    +C PN +TY++
Sbjct: 576 VLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEM-KGKG----IC-PNVMTYNS 629

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +I   C+ G V+KA  L  +M    I P++ ++  LI   C  +D++ A+R+F   +   
Sbjct: 630 LIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTC 689

Query: 273 VQPSVV----------------------------------TFNVIMDELCKNRKMDEASR 298
            Q  V+                                   +  I++ LCK  ++D   R
Sbjct: 690 GQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHR 749

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           LL L++ +G   +   +  ++D     GK    + L   M  M 
Sbjct: 750 LLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMA 793


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 238/485 (49%), Gaps = 31/485 (6%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  +    R S     F  +      P    +N+L+   +A   + +   +++ +   G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+V + N L++ LC+ G   +AL         N +   V   + VTY+T+I G C++G
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLR-----NND---VVDIDNVTYNTVIWGFCQKG 176

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+   L  +M    +  D +T N L+ G C       A+ +   ++D GV   V+  N
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  C+   M +A+ L++   +  V+ +  TYNTL+  FC  G + RAE LF   E +
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFN--EIL 294

Query: 342 GCKHDD---------------------VSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G   D+                     V+Y  LI  YCK   VEE+ SLY++M+  GI P
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VVT +++  G     ++  A  LF EM   G+  +  +Y T I+ L K+G ++EA  L 
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             + +     DI     ++DGL K G+ K A E+F ++    L PN VTY+ ++ G C  
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G+M+ A  +   ME+    P+VITF  +I+G+ +    SK  ++L +M ++ VMP+  + 
Sbjct: 475 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 534

Query: 561 SIVVD 565
           +I++D
Sbjct: 535 AILID 539



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 231/470 (49%), Gaps = 7/470 (1%)

Query: 79  KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
           KN    T+     L P L TY  LI  +CK   V      + +++ +   P+  T +S++
Sbjct: 304 KNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSIL 363

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
            G     ++ EAA LF ++   G +PN ++Y T+IN L ++G  M A NL  +M      
Sbjct: 364 YGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGIS 423

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
             +      VT +T++DGL K G   +A+ +F  +   N+ P+ VTY++L+ G C     
Sbjct: 424 FDI------VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
             A+ +  +M  + V P+V+TF+ I++   K   + +A  +L  MVQR V PN   Y  L
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +DG+   G+ + A++    M+S   +  +V ++IL+N   +   ++EA SL  +M SKGI
Sbjct: 538 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 597

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P +V Y +L  G F+      AL +  EM+   +  D   Y   I GL + G       
Sbjct: 598 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYV 657

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
             R +  L    D   YN +I+  C  G+ + A ++   +    ++PN VTYNI+I GLC
Sbjct: 658 CSRMIE-LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
             G ++KA     +M      P  IT   L+  + R  +  K+ ++  K+
Sbjct: 717 KTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKL 766



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 263/543 (48%), Gaps = 40/543 (7%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY+ L++ +CK+G++ L  +   ++ +    PN  TF+S+I G   +  + +A 
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE------------- 198
            +  ++      PN I Y  LI+G  + G   +A +  +EM +   E             
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNL 576

Query: 199 -------------IGVVCK---PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
                        I +  K   P+ V Y+++IDG  KEG    A ++  +MK++NI  DV
Sbjct: 577 KRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV 636

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V YN+LI GL     + + + +   M++ G+ P  +T+N I++  C   K ++A  +L+ 
Sbjct: 637 VAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNE 695

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           M   G+ PNA TYN L+ G C  G + +AE     M  M      +++  L+  Y ++++
Sbjct: 696 MKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEK 755

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
            ++ L ++ ++V+ G++ ++  YNTL      +     A  + DEM + G++AD  TY  
Sbjct: 756 ADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNA 815

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG----RLKFAWELFCSL 478
            I G C   ++ +A++ +  + +     +I  YN L+ GL  +G     ++   +L   +
Sbjct: 816 LIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEM 875

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               LVPN  TY+I++ G    G   K   L ++M      P + T+++LI  + +  + 
Sbjct: 876 NERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKM 935

Query: 539 SKVNELLHKMKEKKVMPDASIVSIV----VDLLVKNEI--SLKSLPSFLVQERQGEVGES 592
            +  ELL+ +  K  +P++    I+    ++L  + EI  SLK      V++   E+G  
Sbjct: 936 IEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRK 995

Query: 593 NVK 595
            +K
Sbjct: 996 GLK 998



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 256/555 (46%), Gaps = 68/555 (12%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIME 149
           G+ P++++ N+L++  CK+G + L   A G +  +     +  T+N++I G   +  + +
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDL---ALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQ 180

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
              L +++   G   + IT N L+ G CR G    A  +   + +G    GV    + + 
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDG----GVT--KDVIG 234

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            +T+IDG C+ G + +A  L       ++  D+VTYN+L+   C   D   A+ LF E++
Sbjct: 235 LNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294

Query: 270 D-------------------QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
                               + +QP++VT+  ++   CK   ++E+  L   M+  G+ P
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  T ++++ GFC  GK+  A  LF  M  MG   + VSY  +IN   K+  V EA +L 
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            +MV +GI   +VT  T+  GLF++ + + A ++F+ + +  +A +  TY+  +DG CK 
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G +  A  + + +       ++  ++ +I+G  K G L  A ++   +    ++PN + Y
Sbjct: 475 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 534

Query: 491 NIMIQG------------LCND-----------------------GQMDKARDLFLDMEE 515
            I+I G             C +                       G+MD+AR L +DM  
Sbjct: 535 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYS 594

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
               PD++ +  LI G+ +         ++ +MKEK +  D     +  + L+K  + L 
Sbjct: 595 KGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDV----VAYNALIKGLLRLG 650

Query: 576 SLPSFLVQERQGEVG 590
                 V  R  E+G
Sbjct: 651 KYDPRYVCSRMIELG 665



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 234/481 (48%), Gaps = 28/481 (5%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILR-------------------SCFTPNAATFN 135
           ++ TYN L+  FCK G ++     F  IL                        P   T+ 
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYT 325

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           +LI        + E+ +L+ K+   G  P+V+T ++++ G CR G    A  LF EM   
Sbjct: 326 TLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMY-- 383

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
             E+G+   PN V+Y+TII+ L K G V +A  L  QM    I+ D+VT  +++ GL   
Sbjct: 384 --EMGL--DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKV 439

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
               EA+ +F  ++   + P+ VT++ ++D  CK  KM+ A  +L  M +  V PN  T+
Sbjct: 440 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 499

Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
           +++++G+   G +++A ++   M       + + Y ILI+GY K  E + A    +EM S
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 559

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
           + ++ + V ++ L   L  + +++ A  L  +M   G+  D   Y + IDG  K G  + 
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 619

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMI 494
           A+ + + ++      D+ AYN LI GL + G  K+     CS +    L P+ +TYN +I
Sbjct: 620 ALSIVQEMKEKNIRFDVVAYNALIKGLLRLG--KYDPRYVCSRMIELGLAPDCITYNTII 677

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
              C  G+ + A D+  +M+     P+ +T+++LI G  +     K    L +M   + +
Sbjct: 678 NTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFV 737

Query: 555 P 555
           P
Sbjct: 738 P 738



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 246/527 (46%), Gaps = 18/527 (3%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
            EA  +F  M  M   P  VS +  ++ SL K+       +  +++   G+  ++ T   
Sbjct: 373 TEAAVLFREMYEMGLDPNHVS-YATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +++   K+G+       F  IL+    PN  T+++L+ G     ++  A  +  K++   
Sbjct: 432 VMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             PNVIT++++ING  + G    A+++  EM   N        PNT+ Y+ +IDG  K G
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN------VMPNTIVYAILIDGYFKAG 545

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             D A     +MK   +    V ++ L++ L      +EA+ L I+M  +G+ P +V + 
Sbjct: 546 EQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYA 605

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D   K      A  ++  M ++ +R +   YN L+ G   +GK +    +   M  +
Sbjct: 606 SLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIEL 664

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
           G   D ++YN +IN YC   + E+AL +  EM S GI P  VTYN L  GL +   VE A
Sbjct: 665 GLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKA 724

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
               DEM          T+   +    ++    + +++   L     EL +  YN LI  
Sbjct: 725 ESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITV 784

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C+ G  + A  +   +    +  ++VTYN +I+G C    ++KA   +  M  +  AP+
Sbjct: 785 FCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPN 844

Query: 522 VITFDMLIHGF----IRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           + T++ L+ G     +      +  +L+ +M E+ ++P+A+   I+V
Sbjct: 845 ITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 891



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 236/481 (49%), Gaps = 18/481 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  +  T NIL+  +C+IG V         ++    T +    N+LI G      + +A
Sbjct: 192 GLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQA 251

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN--------GNGEIGVV 202
             L         + +++TYNTL+   C+TG    A +LF E+           N ++   
Sbjct: 252 TELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQ 311

Query: 203 -----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                 +P  VTY+T+I   CK   V+++ +L+ +M    I PDVVT +S+++G C    
Sbjct: 312 NEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EA  LF EM + G+ P+ V++  I++ L K+ ++ EA  L   MV RG+  +  T  T
Sbjct: 372 LTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           +MDG   +GK   AEE+F ++  +    + V+Y+ L++GYCK  ++E A  + ++M  + 
Sbjct: 432 VMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           + P V+T++++  G  +   +  A+ +  EM +  V  +T  Y   IDG  K G    A 
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVAD 551

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           +  + ++  + E     ++ L++ L + GR+  A  L   +    + P++V Y  +I G 
Sbjct: 552 DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN--EPSKVNELLHKMKEKKVMP 555
             +G    A  +  +M+E     DV+ ++ LI G +R+   +P  V     +M E  + P
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYV---CSRMIELGLAP 668

Query: 556 D 556
           D
Sbjct: 669 D 669



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 27/344 (7%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDT-----RLNATGLFPNLYTYNILINCFCKIGR 111
           M+ +  +P  ++   I+     K K  D       + + G+ PN  TYNILI   CK G 
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           V     A   +L   F P   T   L+K      +  +   +  KL A G E ++  YNT
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 780

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           LI   CR G T  A  + +EM             + VTY+ +I G C    V+KA   + 
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRG------ISADLVTYNALIRGYCTGSHVEKALKTYS 834

Query: 232 QMKDENINPDVVTYNSLIHGLCHAN----DWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           QM  + I P++ TYN+L+ GL +A        E ++L  EM ++G+ P+  T+++++   
Sbjct: 835 QMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 894

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            +     +   L   M+ +G  P   TYN L+  +   GK+  A EL   + + G   + 
Sbjct: 895 GRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 954

Query: 348 VSYNILINGYCK---NKEVEEAL---------SLYREMVSKGIK 379
            +Y+IL  G+       E++ +L          L  EM  KG+K
Sbjct: 955 FTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLK 998



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 162/363 (44%), Gaps = 21/363 (5%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A A F  M+   + P +  +N+L++    +   ++ K ++ +M+  GV P V + NV++ 
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LCK   +D A  L  L     V  +  TYNT++ GFC  G +++   L   M   G   
Sbjct: 138 SLCKVGDLDLA--LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCF 195

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D ++ NIL+ GYC+   V+ A  +   +V  G+   V+  NTL  G  E   +  A +L 
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELI 255

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-------------------RIL 446
           +   R  V  D  TY T +   CK G +  A  LF  +                    I 
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +  +  Y  LI   CK   ++ +  L+  +    ++P+VVT + ++ G C  G++ +A
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF +M E    P+ +++  +I+   +     +   L  +M  + +  D    + V+D 
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 567 LVK 569
           L K
Sbjct: 436 LFK 438



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFC 107
            D ML M   P P++    L+ + ++++  D       +L A+GL  +L  YN LI  FC
Sbjct: 728 LDEMLVMEFVPTPITH-KFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 786

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
           ++G      +    +++   + +  T+N+LI+G    S + +A   ++++   G  PN+ 
Sbjct: 787 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNIT 846

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           TYNTL+ GL   G     +   E++ +   E G+V  PN  TY  ++ G  + G   K  
Sbjct: 847 TYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV--PNAATYDILVSGYGRVGNRKKTI 904

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI---- 283
            L ++M  +   P + TYN LI     +    EA+ L  +++ +G  P+  T++++    
Sbjct: 905 ILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 964

Query: 284 --------MDELCKNRKMDEASRLLDLMVQRGVR 309
                   +D   K     E  +LL  M ++G++
Sbjct: 965 LNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGLK 998


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 243/510 (47%), Gaps = 45/510 (8%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G+ P++ T N L N   + G V      + ++ R  F PN  T+  +IK L  +  + + 
Sbjct: 190 GILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQP 249

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             +F +++  G  P+   +   I GLC    + +   + +    GN  + V        Y
Sbjct: 250 LCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEV------YAY 303

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++ G C E  +D+A+ +F  M+ + + PDV  Y+SLIHG C +++   A  L  EM+ 
Sbjct: 304 TAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMIS 363

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +GV+ + V  + I+  L +     E       + + G+  +   YN + D  C++GK+  
Sbjct: 364 RGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVED 423

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A E+   M+S     D   Y  LINGYC   ++  A ++++EM  KG+KP +VTYN L  
Sbjct: 424 AVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAA 483

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
           GL         +KL D M+  G+  ++ T+   I+GLC  G ++EA   F +L     + 
Sbjct: 484 GLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLE----DK 539

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHG----------------------------- 481
           +I+ Y+ +++G C++  +K ++E+F  L +                              
Sbjct: 540 NIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLL 599

Query: 482 --VLVPNV----VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +L+ NV    + Y+ ++  LC  G M  AR LF         PDV+T+ ++I+ + R+
Sbjct: 600 DRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRM 659

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           N   + ++L   MK + + PD    ++++D
Sbjct: 660 NCLQEAHDLFQDMKRRGIKPDVITFTVLLD 689



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 156/634 (24%), Positives = 267/634 (42%), Gaps = 122/634 (19%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFC 107
           F +  R     P V + N L   L ++   D       +L   G  PN YTY I+I   C
Sbjct: 182 FLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALC 241

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL---HA--------------------- 143
           K G +      F  + R    P++  F + I+GL   H                      
Sbjct: 242 KKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVY 301

Query: 144 -----------ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
                      E ++ EA  +F  ++  G  P+V  Y++LI+G C++ + + AL L +EM
Sbjct: 302 AYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEM 361

Query: 193 ANGN---------------GEIGVVCKP--------------NTVTYSTIIDGLCKEGFV 223
            +                 GE+G+  +               + V Y+ + D LC  G V
Sbjct: 362 ISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKV 421

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
           + A  +  +MK + +  DV  Y +LI+G C   D   A  +F EM ++G++P +VT+NV+
Sbjct: 422 EDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVL 481

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
              L +N    E  +LLD M  +G++PN+ T+  +++G C  GK+  AE  F S+E    
Sbjct: 482 AAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNI 541

Query: 344 KHDDVSYNILINGYCKNK-----------------------------------EVEEALS 368
           +     Y+ ++NGYC+                                     ++E+A+ 
Sbjct: 542 E----IYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVK 597

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L   M+   ++P+ + Y+ +   L +   +++A  LFD     G   D  TYT  I+  C
Sbjct: 598 LLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYC 657

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS---------GRLK----FAWELF 475
           +   + EA +LF+ ++    + D+  +  L+DG  K          G+ K    +   + 
Sbjct: 658 RMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTIL 717

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + P+VV Y +++ G        +A  LF  M E+   PD IT+  L+ G    
Sbjct: 718 RDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNR 777

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
               K   LL++M  K + PD  I+S +   ++K
Sbjct: 778 GHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIK 811



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 200/432 (46%), Gaps = 58/432 (13%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G+F +   YNI+ +  C +G+V         +       +   + +LI G   +  
Sbjct: 396 LKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGD 455

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           ++ A  +F ++K  G +P+++TYN L  GL R GH    + L + M +         KPN
Sbjct: 456 LVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQG------MKPN 509

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
           + T+  II+GLC  G V +A+  F  ++D+NI      Y+++++G C  +   ++  +F+
Sbjct: 510 STTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIE----IYSAMVNGYCETDLVKKSYEVFL 565

Query: 267 EMMDQG-----------------------------------VQPSVVTFNVIMDELCKNR 291
           ++++QG                                   V+PS + ++ I+  LC+  
Sbjct: 566 KLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAG 625

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            M  A  L D+ V RG  P+  TY  +++ +C M  +  A +LF  M+  G K D +++ 
Sbjct: 626 DMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFT 685

Query: 352 ILINGYCK--------NKEVEEALSLY-----REMVSKGIKPTVVTYNTLFLGLFEIHQV 398
           +L++G  K        +    +  SLY     R+M    I P VV Y  L  G  +    
Sbjct: 686 VLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNF 745

Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
           + A+ LFD+M   G+  DT TYT  + GLC  G++ +AV L   +       D+   + L
Sbjct: 746 QQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISAL 805

Query: 459 IDGLCKSGRLKF 470
             G+ K+ +++F
Sbjct: 806 KRGIIKARKVQF 817



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 241/572 (42%), Gaps = 44/572 (7%)

Query: 27  SLLVHFRDLTTREGDINVITPNEAFCIFDYML---RMHPSPPPVSSFNILLASLAKNKHY 83
           S+L H     TR       TP  +F  FD +     +H +P    SF             
Sbjct: 41  SILWHPFSSATRALSNTPFTPPSSFSTFDVLQTLHHLHNNPSHALSFF------------ 88

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
            T L  TG    + TY  +I          L F    R L + F         LI   H 
Sbjct: 89  -THLRHTGFSHTISTYAAIIKI--------LSFWNLQRQLDTLFL-------HLINRDHP 132

Query: 144 ESRIMEAAALFTKLKAFGC-EPNVITYNTLINGLCRTGHTMIALNLFEEMAN---GNGEI 199
                      T  + F     N        NG  +T    ++LN+F++  +        
Sbjct: 133 PLPFPLLNLFETLFQDFNTSHKNNYFLLRAFNGFVKT---CVSLNMFDKAIDFLFQTRRR 189

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           G++  P+ +T + + + L + G VDKA A++ Q+K     P+  TY  +I  LC   D  
Sbjct: 190 GIL--PDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLK 247

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +   +F EM   GV P    F   ++ LC N + D    +L    +         Y  ++
Sbjct: 248 QPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVV 307

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
            GFC   K++ A+ +F  ME  G   D   Y+ LI+GYCK+  +  AL+L+ EM+S+G+K
Sbjct: 308 RGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVK 367

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
              V  + +   L E+      +  F E++  G+  D   Y    D LC  G + +AVE+
Sbjct: 368 TNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEM 427

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              ++  +  LD++ Y  LI+G C  G L  A+ +F  +    L P++VTYN++  GL  
Sbjct: 428 VEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSR 487

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
           +G   +   L   ME     P+  T  M+I G     +  +     + +++K +     I
Sbjct: 488 NGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNI----EI 543

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
            S +V+   + ++  KS   FL    QG++ +
Sbjct: 544 YSAMVNGYCETDLVKKSYEVFLKLLNQGDMAK 575



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 162/354 (45%), Gaps = 29/354 (8%)

Query: 65  PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P + ++N+L A L++N H          + + G+ PN  T+ ++I   C  G+V    + 
Sbjct: 473 PDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVY 532

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F     S    N   +++++ G      + ++  +F KL   G      +   L++ LC 
Sbjct: 533 FN----SLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCM 588

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           TG    A+ L + M   N E      P+ + YS I+  LC+ G +  A+ LF        
Sbjct: 589 TGDIEKAVKLLDRMLLSNVE------PSKIMYSKILAALCQAGDMKNARTLFDVFVHRGF 642

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK--------- 289
            PDVVTY  +I+  C  N   EA  LF +M  +G++P V+TF V++D   K         
Sbjct: 643 TPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSS 702

Query: 290 --NRKMDE--ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
              RK      S +L  M Q  + P+   Y  LMDG        +A  LF  M   G + 
Sbjct: 703 HGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEP 762

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVE 399
           D ++Y  L++G C    VE+A++L  EM SKG+ P V   + L  G+ +  +V+
Sbjct: 763 DTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKVQ 816


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 238/485 (49%), Gaps = 31/485 (6%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI  +    R S     F  +      P    +N+L+   +A   + +   +++ +   G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+V + N L++ LC+ G   +AL         N +   V   + VTY+T+I G C++G
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLR-----NND---VVDIDNVTYNTVIWGFCQKG 176

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
            VD+   L  +M    +  D +T N L+ G C       A+ +   ++D GV   V+  N
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D  C+   M +A+ L++   +  V+ +  TYNTL+  FC  G + RAE LF   E +
Sbjct: 237 TLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFN--EIL 294

Query: 342 GCKHDD---------------------VSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G   D+                     V+Y  LI  YCK   VEE+ SLY++M+  GI P
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VVT +++  G     ++  A  LF EM   G+  +  +Y T I+ L K+G ++EA  L 
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             + +     DI     ++DGL K G+ K A E+F ++    L PN VTY+ ++ G C  
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G+M+ A  +   ME+    P+VITF  +I+G+ +    SK  ++L +M ++ VMP+  + 
Sbjct: 475 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 534

Query: 561 SIVVD 565
           +I++D
Sbjct: 535 AILID 539



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 31/502 (6%)

Query: 79  KNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
           KN    T+     L P L TY  LI  +CK   V      + +++ +   P+  T +S++
Sbjct: 304 KNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSIL 363

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
            G     ++ EAA LF ++   G +PN ++Y T+IN L ++G  M A NL  +M      
Sbjct: 364 YGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGIS 423

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
             +      VT +T++DGL K G   +A+ +F  +   N+ P+ VTY++L+ G C     
Sbjct: 424 FDI------VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
             A+ +  +M  + V P+V+TF+ I++   K   + +A  +L  MVQR V PN   Y  L
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +DG+   G+ + A++    M+S   +  +V ++IL+N   +   ++EA SL  +M SKGI
Sbjct: 538 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 597

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
            P +V Y +L  G F+      AL +  EM+   +  D   Y   I GL + G       
Sbjct: 598 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYV 657

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
             R +  L    D   YN +I+  C  G+ + A ++   +    ++PN VTYNI+I GLC
Sbjct: 658 CSRMIE-LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLC 716

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK-------MKEK 551
             G                  P  IT   L+  + R  +  K+ ++  K       +K +
Sbjct: 717 KTG----------------FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQ 760

Query: 552 KVMPDASIV-SIVVDLLVKNEI 572
           KV+ D  +   I  DL+  N +
Sbjct: 761 KVVLDEMVKRGISADLVTYNAL 782



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 253/525 (48%), Gaps = 35/525 (6%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIME 149
           G+ P++++ N+L++  CK+G + L   A G +  +     +  T+N++I G   +  + +
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDL---ALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQ 180

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
              L +++   G   + IT N L+ G CR G    A  +   + +G    GV    + + 
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDG----GVT--KDVIG 234

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
            +T+IDG C+   + +A  L       ++  D+VTYN+L+   C   D   A+ LF E++
Sbjct: 235 LNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294

Query: 270 D-------------------QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
                               + +QP++VT+  ++   CK   ++E+  L   M+  G+ P
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354

Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
           +  T ++++ GFC  GK+  A  LF  M  MG   + VSY  +IN   K+  V EA +L 
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQ 414

Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
            +MV +GI   +VT  T+  GLF++ + + A ++F+ + +  +A +  TY+  +DG CK 
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
           G +  A  + + +       ++  ++ +I+G  K G L  A ++   +    ++PN + Y
Sbjct: 475 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 534

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            I+I G    G+ D A D   +M+        + FD+L++   R+    +   L+  M  
Sbjct: 535 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYS 594

Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNVK 595
           K + PD    + ++D   K    L +L   +VQE +    E N++
Sbjct: 595 KGIDPDIVNYASLIDGYFKEGNQLAALS--IVQEMK----EKNIR 633



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 236/502 (47%), Gaps = 47/502 (9%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY+ L++ +CK+G++ L  +   ++ +    PN  TF+S+I G   +  + +A 
Sbjct: 457 LAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAV 516

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  ++      PN I Y  LI+G  + G   +A +  +EM +   E       + V + 
Sbjct: 517 DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE------ESNVIFD 570

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +++ L + G +D+A++L + M  + I+PD+V Y SLI G     +   A  +  EM ++
Sbjct: 571 ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 630

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
            ++  VV +N ++  L +  K D    +   M++ G+ P+  TYNT+++ +C+ GK   A
Sbjct: 631 NIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDA 689

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKN------------------------------K 361
            ++   M+S G   + V+YNILI G CK                               K
Sbjct: 690 LDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEK 749

Query: 362 EVEEALSLYR------EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            V   L L R      EMV +GI   +VTYN L  G      VE ALK + +M  DG+A 
Sbjct: 750 LVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP 809

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI----QAYNCLIDGLCKSGRLKFA 471
           +  TY T + GL   G + E +E    L     E  +      Y+ L+ G  + G  K  
Sbjct: 810 NITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKT 869

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
             L   +     VP + TYN++I      G+M +AR+L  D+      P+  T+D+L  G
Sbjct: 870 IILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 929

Query: 532 FIRINEPSKVNELLHKMKEKKV 553
           ++ ++   +++  L +  E +V
Sbjct: 930 WLNLSYEPEIDRSLKRSYEIEV 951



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 236/481 (49%), Gaps = 18/481 (3%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL  +  T NIL+  +C+IG V         ++    T +    N+LI G      + +A
Sbjct: 192 GLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQA 251

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN--------GNGEIGVV 202
             L         + +++TYNTL+   C+TG    A +LF E+           N ++   
Sbjct: 252 TELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQ 311

Query: 203 -----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                 +P  VTY+T+I   CK   V+++ +L+ +M    I PDVVT +S+++G C    
Sbjct: 312 NEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
             EA  LF EM + G+ P+ V++  I++ L K+ ++ EA  L   MV RG+  +  T  T
Sbjct: 372 LTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTT 431

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           +MDG   +GK   AEE+F ++  +    + V+Y+ L++GYCK  ++E A  + ++M  + 
Sbjct: 432 VMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           + P V+T++++  G  +   +  A+ +  EM +  V  +T  Y   IDG  K G    A 
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVAD 551

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           +  + ++  + E     ++ L++ L + GR+  A  L   +    + P++V Y  +I G 
Sbjct: 552 DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN--EPSKVNELLHKMKEKKVMP 555
             +G    A  +  +M+E     DV+ ++ LI G +R+   +P  V     +M E  + P
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYV---CSRMIELGLAP 668

Query: 556 D 556
           D
Sbjct: 669 D 669



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 162/363 (44%), Gaps = 21/363 (5%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A A F  M+   + P +  +N+L++    +   ++ K ++ +M+  GV P V + NV++ 
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
            LCK   +D A  L  L     V  +  TYNT++ GFC  G +++   L   M   G   
Sbjct: 138 SLCKVGDLDLA--LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCF 195

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           D ++ NIL+ GYC+   V+ A  +   +V  G+   V+  NTL  G  E   +  A +L 
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELI 255

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-------------------RIL 446
           +   R  V  D  TY T +   CK G +  A  LF  +                    I 
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
             +  +  Y  LI   CK   ++ +  L+  +    ++P+VVT + ++ G C  G++ +A
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF +M E    P+ +++  +I+   +     +   L  +M  + +  D    + V+D 
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 567 LVK 569
           L K
Sbjct: 436 LFK 438



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 53/302 (17%)

Query: 67  VSSFNILLASLAKNKHYD-----TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
           V ++N L+  L +   YD     +R+   GL P+  TYN +IN +C  G+          
Sbjct: 636 VVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNE 695

Query: 122 ILRSCFTPNAATFNSLIKGL----------------HAESRIMEAAALFT---KLKAFGC 162
           +      PNA T+N LI GL                 A SR  +A  +     KL A G 
Sbjct: 696 MKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 755

Query: 163 E-----------------PNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCK 204
           E                  +++TYN LI G C   H   AL  + +M  +G         
Sbjct: 756 ELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG-------IA 808

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKA----LFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
           PN  TY+T++ GL   G +++       L  +M +  + P+  TY+ L+ G     +  +
Sbjct: 809 PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKK 868

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
              L IEM+ +G  P++ T+NV++ +  K+ KM EA  LL+ ++ +G  PN+ TY+ L  
Sbjct: 869 TIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTC 928

Query: 321 GF 322
           G+
Sbjct: 929 GW 930


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 235/493 (47%), Gaps = 52/493 (10%)

Query: 67  VSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           V +FN +LA+LA+ +        Y        + P++ TY IL+N  CK GRV       
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRV------- 188

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           G  LR            ++ G+  +                   P+V+T NT+++GLC++
Sbjct: 189 GDALR------------VLDGMSRQD--------------LDIRPDVVTLNTVVDGLCKS 222

Query: 180 GHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           G    AL   E+ M++ +G     C PNTVTY+ +ID  C+ G +  A  L  +M++E +
Sbjct: 223 GRVQEALAFVEQRMSSVHG-----CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV 277

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP----SVVTFNVIMDELCKNRKMD 294
             ++VT N+++ GLC A     A   F E   + V P    + VT++ ++  L     + 
Sbjct: 278 PQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVG 335

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  L    +  G  P+A  Y T++ G    G++  A  +  SM+  G K D  +YNILI
Sbjct: 336 MAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILI 395

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G+C+ K + EA  L +EM   GI+P V TYNTL  G  +        +L  +M  DG  
Sbjct: 396 AGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
               T+ T + G CK G I EA+ + R++       +   YN LID LCK G +  A EL
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    +  NV T+N +++GL +    +KA +L   M E    PD +T D+L+     
Sbjct: 516 FDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPV 575

Query: 535 INEPSKVNELLHK 547
           I E  ++   + +
Sbjct: 576 IGETDRLKRFMQQ 588



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 222/445 (49%), Gaps = 19/445 (4%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGC---EPNVITYNTLINGLCRTGHTMIALNLF 189
            FNS++  L     +   A ++  ++  GC    P+V+TY  L+NGLC+ G    AL + 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN---PDVVTYN 246
           + M+  + +I    +P+ VT +T++DGLCK G V +A A F++ +  +++   P+ VTYN
Sbjct: 196 DGMSRQDLDI----RPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYN 250

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI   C   + + A  L  +M ++GV  ++VT N I+  LC+  +   A        +R
Sbjct: 251 CLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFF--REKR 308

Query: 307 GVRP----NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
            V P    NA TY+TL+        +  A ELF    S G   D + Y  +I+G  +   
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +E+A S+   M   G K     YN L  G     ++  A +L  EM+  G+  D  TY T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + G CK G      EL   +    C+  +  +  L+ G CK G++  A  +  S+    
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + PN V YN +I  LC  G +D A +LF +M+E +   +V TF+ L+ G    N P K  
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLL 567
           EL+ +M+E++  PD   V ++++ L
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 199/395 (50%), Gaps = 24/395 (6%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKD-ENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           +   +++I+  L +   V     ++  M+   ++ PDVVTY  L++GLC A    +A R+
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 265 FIEM--MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR-----GVRPNACTYNT 317
              M   D  ++P VVT N ++D LCK+ ++ EA   L  + QR     G  PN  TYN 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA---LAFVEQRMSSVHGCPPNTVTYNC 251

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE--MVS 375
           L+D FC +G I+ A EL   ME+ G   + V+ N ++ G C+      AL  +RE   V 
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311

Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
              K   VTY+TL   L   + V  A++LF E   +G + D   Y T I GL + G + +
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A  +  +++    +LD +AYN LI G C+  RL  A+EL   +    + P+V TYN ++ 
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
           G C  G      +L   M ++   P VITF  L+HG+ ++ +  +   +L  M E  + P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 556 DASIVSIVVDLLVK-----------NEISLKSLPS 579
           +  I + ++D L K           +E+  KS+P+
Sbjct: 492 NNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526


>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 678

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 222/483 (45%), Gaps = 49/483 (10%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           + G  PN+ T+  L+  +C++G V   +  F  +      PN+ T++ LI+GL  +    
Sbjct: 193 SRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGDFE 252

Query: 149 EAAALFTKL------KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               L   L      +      N   +  +I+ LCR G       + E+M  G       
Sbjct: 253 HGRELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQGKS----- 307

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
                  Y+ +ID LC+ G    A  +   MK + + P +V+YNS+IHGLC       A 
Sbjct: 308 -VNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKERGCMRAY 366

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           +LF E ++ G  PS  T+ V+++ LC+   +D+A R+++ M+ +        YN  +   
Sbjct: 367 QLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRIYNIYLRAL 426

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS-------------- 368
           CL         +  SM    C+ D ++ N ++NG+CK   +EEAL+              
Sbjct: 427 CLTNSATELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMTMGKFCAPD 486

Query: 369 -----------------------LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
                                  LY+ M  KGI P V TYN +  GLF++   E A++ F
Sbjct: 487 AVTFTTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAF 546

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
             M   GVAAD++TYT  IDGLC++G I +A +L+  +       D   Y  ++ GLC++
Sbjct: 547 KRMLAAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVIWPSRIHDDFVYASILKGLCRA 606

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G+L  A      L    + PN+++YNI+I   C  G   +A  +  +M +N   PD +T+
Sbjct: 607 GKLDEACHFLYELVDSGVSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTPDAVTW 666

Query: 526 DML 528
            +L
Sbjct: 667 RIL 669



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 234/516 (45%), Gaps = 20/516 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLNA--------TGLFPNLYTYNILINCFCKIGRVSLGF 116
           P   + N+L+A L  +++    L+             P+L  YN  I   C+  +  +  
Sbjct: 126 PDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPDVAH 185

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                ++     PN  TF SL+ G      +  A  LF +++     PN +TY+ LI GL
Sbjct: 186 RLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGL 245

Query: 177 CRTGH----TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQ 232
            R G       +  NL+E M +      V    N   +  +ID LC+EGF++    +   
Sbjct: 246 LRQGDFEHGRELMCNLWETMKDEEKNQSV----NAAAFVNVIDSLCREGFLNDVFKIAED 301

Query: 233 M-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           M + +++N +   Y  +I  LC A   + A R+   M  +G+ PS+V++N I+  LCK R
Sbjct: 302 MPQGKSVNQEF-AYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKER 360

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
               A +L +  ++ G  P+  TY  L++  C    +++A  +  +M +         YN
Sbjct: 361 GCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRIYN 420

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           I +   C      E L++   M+    +P V+T NT+  G  ++H++E AL +  +M   
Sbjct: 421 IYLRALCLTNSATELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMTMG 480

Query: 412 GV-AADTRTYTTFIDGLCKNGYIIEAVEL-FRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
              A D  T+TT I GL   G   EA+ L ++ +        ++ YN +I GL K    +
Sbjct: 481 KFCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAE 540

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A   F  +    +  +  TY ++I GLC  G +DKA+ L+ D+   +   D   +  ++
Sbjct: 541 EAMRAFKRMLAAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVIWPSRIHDDFVYASIL 600

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
            G  R  +  +    L+++ +  V P+    +IV+D
Sbjct: 601 KGLCRAGKLDEACHFLYELVDSGVSPNIISYNIVID 636



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 230/502 (45%), Gaps = 32/502 (6%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L  +G  P+   ++ +I+  C   R       F   + S   P+  T N LI      +R
Sbjct: 84  LRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCIASDCVPDERTCNVLI------AR 137

Query: 147 IMEA----AALFTKLKAFGCEP----NVITYNTLINGLCRTGHTMIALNL-FEEMANGNG 197
           ++++    A L    + F  +P    ++I YN  I   C      +A  L F+ ++ G+ 
Sbjct: 138 LLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPDVAHRLLFDMISRGHC 197

Query: 198 EIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
                  PN VT+++++ G C+ G V  A  LF +M++ ++ P+ +TY+ LI GL    D
Sbjct: 198 -------PNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGD 250

Query: 258 WNEAKRL----FIEMMDQGVQPSV--VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
           +   + L    +  M D+    SV    F  ++D LC+   +++  ++ + M Q      
Sbjct: 251 FEHGRELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQGKSVNQ 310

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
              Y  ++D  C  GK + A  +   M+  G     VSYN +I+G CK +    A  L+ 
Sbjct: 311 EFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKERGCMRAYQLFE 370

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM-QRDGVAADTRTYTTFIDGLCKN 430
           E +  G  P+  TY  L   L +   ++ A ++ + M  +DGV   TR Y  ++  LC  
Sbjct: 371 EGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDR-TRIYNIYLRALCLT 429

Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL-VPNVVT 489
               E + +  ++   +C+ D+   N +++G CK  R++ A  +   +  G    P+ VT
Sbjct: 430 NSATELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMTMGKFCAPDAVT 489

Query: 490 YNIMIQGLCNDGQMDKARDLFLD-MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
           +  +I GL N G+  +A +L    M E   +P V T++ +IHG  ++    +      +M
Sbjct: 490 FTTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRM 549

Query: 549 KEKKVMPDASIVSIVVDLLVKN 570
               V  D+   ++++D L ++
Sbjct: 550 LAAGVAADSKTYTLIIDGLCES 571



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 174/398 (43%), Gaps = 16/398 (4%)

Query: 206 NTVTYSTIIDGLC-KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           N+  ++  I  LC ++  VD+A  L   ++     PD + ++S+IH LC A  + EA   
Sbjct: 56  NSSYWTKKIHLLCTQQRKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHR 115

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM--VQRGVRPNACTYNTLMDGF 322
           F+  +     P   T NV++  L  ++       +L  +  V+    P+   YN  +   
Sbjct: 116 FLLCIASDCVPDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQC 175

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   + + A  L   M S G   + V++  L+ GYC+  EV  A  L+ EM    + P  
Sbjct: 176 CEFSQPDVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNS 235

Query: 383 VTYNTLFLGLFEIHQVEHALKLF--------DEMQRDGVAADTRTYTTFIDGLCKNGYII 434
           +TY+ L  GL      EH  +L         DE +   V A    +   ID LC+ G++ 
Sbjct: 236 LTYSVLIRGLLRQGDFEHGRELMCNLWETMKDEEKNQSVNA--AAFVNVIDSLCREGFLN 293

Query: 435 EAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMI 494
           +  ++   +   K      AY  +ID LC++G+   A  +   +    L P++V+YN +I
Sbjct: 294 DVFKIAEDMPQGKSVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSII 353

Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
            GLC +    +A  LF +  E    P   T+ +L+    +  +  K   ++  M  K  +
Sbjct: 354 HGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGV 413

Query: 555 PDASIVSIVVDLL-VKNEIS--LKSLPSFLVQERQGEV 589
               I +I +  L + N  +  L  L S L  E Q +V
Sbjct: 414 DRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDV 451


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 203/369 (55%), Gaps = 9/369 (2%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           N  T + +++GL    R+ +A   F   L+    +P+V++Y TLINGLC+ G    A +L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
           F +M    G     C+PN  TY+ ++DGLCK+  +D A+A+  + +  +  PDVVTYN+L
Sbjct: 69  FRKMVAAGG-----CRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           +  L      +EA   F +M ++G  P++V+FN I+  LC+ R++ +A  + + M+ R  
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            PN  TY+ ++DG C   +++ A++L   M S GC+ D V+Y  L+ G+     ++ AL 
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L R MVS+G  P VVTY  +   L ++ +V+ A ++F E+  +  + +  TY+  I G C
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           +   + E  ++ R    + C  ++  YN +I GL    R + A+ +F  +     VP+  
Sbjct: 304 RASRVDEGGKVMRE---MACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDAR 360

Query: 489 TYNIMIQGL 497
           TY  + + L
Sbjct: 361 TYRGLKRAL 369



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/389 (33%), Positives = 199/389 (51%), Gaps = 23/389 (5%)

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFE---EMANGNGEIGVVCKPNTVTYSTIIDGL 217
           G + N  T + ++ GLCR G    AL  F+   E+A+         +P+ V+Y+T+I+GL
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHA--------QPDVVSYTTLINGL 56

Query: 218 CKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
           CK G VD A  LF +M       P+  TYN+L+ GLC  +  + A+ +  E   +   P 
Sbjct: 57  CKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPD 116

Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
           VVT+N +M  L +  ++DEA      M + G  P   ++N ++ G C   ++  A E+F 
Sbjct: 117 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 176

Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
            M       + V+Y+++I+G CK+ +++EA  L   MVS+G +P +V Y  L LG     
Sbjct: 177 EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAG 236

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
           +++ AL L   M   G   D  TYT  ID LCK G + +A E+FR L   KC  ++  Y+
Sbjct: 237 RLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYS 296

Query: 457 CLIDGLCKSGRL----KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
            LI G C++ R+    K   E+ C        PNVVTYN MI GL    + ++A  +F +
Sbjct: 297 ALIGGYCRASRVDEGGKVMREMACR-------PNVVTYNTMIWGLSMVDRNEEAYGMFRE 349

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKV 541
           M E    PD  T+  L      I+ P  V
Sbjct: 350 MSECGFVPDARTYRGLKRALRMIDHPPHV 378



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 189/342 (55%), Gaps = 12/342 (3%)

Query: 81  KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS--CFTPNAATFNSLI 138
           +H+D  L      P++ +Y  LIN  CK+GRV   F  F +++ +  C  PNA T+N+L+
Sbjct: 31  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGC-RPNAFTYNALV 89

Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
            GL  + R+  A A+  + +     P+V+TYNTL+  L + G    AL  F +M     E
Sbjct: 90  DGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT----E 145

Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
            G V  P  V+++ II GLC+   +  A  +F +M D + +P++VTY+ +I GLC ++  
Sbjct: 146 EGYV--PTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQL 203

Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
           +EA++L   M+ +G +P +V +  ++       ++D A  LL  MV +G  P+  TY  +
Sbjct: 204 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 263

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +D  C +G+++ A E+F  + +  C  + V+Y+ LI GYC+   V+E   + REM     
Sbjct: 264 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---AC 320

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +P VVTYNT+  GL  + + E A  +F EM   G   D RTY
Sbjct: 321 RPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 174/356 (48%), Gaps = 16/356 (4%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN-------ATGLFPNLYTYNILINCF 106
           FD  L +  + P V S+  L+  L K    D   +       A G  PN +TYN L++  
Sbjct: 33  FDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL 92

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
           CK  R+           +  F P+  T+N+L+  L    R+ EA A FT++   G  P +
Sbjct: 93  CKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTL 152

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           +++N +I GLCR      AL +F EM + +        PN VTYS +IDGLCK   +D+A
Sbjct: 153 VSFNAIITGLCRARRLADALEVFNEMIDRDFH------PNLVTYSVVIDGLCKSDQLDEA 206

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
           + L  +M  E   PD+V Y  L+ G   A   + A  L   M+ QG  P VVT+ V++D+
Sbjct: 207 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 266

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LCK  ++D+A  +   +V     PN  TY+ L+ G+C   + +R +E    M  M C+ +
Sbjct: 267 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC---RASRVDEGGKVMREMACRPN 323

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            V+YN +I G       EEA  ++REM   G  P   TY  L   L  I    H L
Sbjct: 324 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDHPPHVL 379



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 185/354 (52%), Gaps = 5/354 (1%)

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALF-LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           N  T S I+ GLC+ G V +A   F   ++  +  PDVV+Y +LI+GLC     + A  L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 265 FIEMMDQG-VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           F +M+  G  +P+  T+N ++D LCK  ++D A  ++    +R   P+  TYNTLM    
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            +G+++ A   F  M   G     VS+N +I G C+ + + +AL ++ EM+ +   P +V
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY+ +  GL +  Q++ A +L D M  +G   D   YT  + G    G +  A+ L R +
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
               C  D+  Y  +ID LCK GR+  A E+F  L      PNVVTY+ +I G C   ++
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           D+   +   M E A  P+V+T++ +I G   ++   +   +  +M E   +PDA
Sbjct: 309 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 359



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 162/323 (50%), Gaps = 40/323 (12%)

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG-VRPNACTYNTLMDGFCLMGKIN 329
           +G+Q +  T ++I+  LC+  ++ +A    D  ++    +P+  +Y TL++G C +G+++
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 330 RAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            A +LF  M  + GC+ +  +YN L++G CK   ++ A ++  E   +   P VVTYNTL
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              LF++ +V+ AL  F +M  +G      ++   I GLC+   + +A+E+F  +     
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 449 ELDIQAYNCLIDGLCKS-----------------------------------GRLKFAWE 473
             ++  Y+ +IDGLCKS                                   GRL  A  
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   +     +P+VVTY ++I  LC  G++D A ++F ++  N  +P+V+T+  LI G+ 
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYC 303

Query: 534 RINEPSKVNELLHKMKEKKVMPD 556
           R    S+V+E    M+E    P+
Sbjct: 304 R---ASRVDEGGKVMREMACRPN 323



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 2/201 (0%)

Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD-EMQRDGVAADTRTYTTFIDGLCKNG 431
           M  +G++    T + +  GL    +V  AL+ FD  ++      D  +YTT I+GLCK G
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 432 YIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            +  A +LFR +     C  +   YN L+DGLCK  RL  A  +          P+VVTY
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
           N ++  L   G++D+A   F  M E    P +++F+ +I G  R    +   E+ ++M +
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 551 KKVMPDASIVSIVVDLLVKNE 571
           +   P+    S+V+D L K++
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSD 201


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 235/493 (47%), Gaps = 52/493 (10%)

Query: 67  VSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           V +FN +LA+LA+ +        Y        + P++ TY IL+N  CK GRV       
Sbjct: 136 VFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRV------- 188

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           G  LR            ++ G+  +                   P+V+T NT+++GLC++
Sbjct: 189 GDALR------------VLDGMSRQD--------------LDIRPDVVTLNTVVDGLCKS 222

Query: 180 GHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
           G    AL   E+ M++ +G     C PNTVTY+ +ID  C+ G +  A  L  +M++E +
Sbjct: 223 GRVQEALAFVEQRMSSVHG-----CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGV 277

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP----SVVTFNVIMDELCKNRKMD 294
             ++VT N+++ GLC A     A   F E   + V P    + VT++ ++  L     + 
Sbjct: 278 PQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTYSTLVGALLHTNNVG 335

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            A  L    +  G  P+A  Y T++ G    G++  A  +  SM+  G K D  +YNILI
Sbjct: 336 MAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILI 395

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G+C+ K + EA  L +EM   GI+P V TYNTL  G  +        +L  +M  DG  
Sbjct: 396 AGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQ 455

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
               T+ T + G CK G I EA+ + R++       +   YN LID LCK G +  A EL
Sbjct: 456 PSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIEL 515

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
           F  +    +  NV T+N +++GL +    +KA +L   M E    PD +T D+L+     
Sbjct: 516 FDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPV 575

Query: 535 INEPSKVNELLHK 547
           I E  ++   + +
Sbjct: 576 IGETDRLKRFMQQ 588



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 222/445 (49%), Gaps = 19/445 (4%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGC---EPNVITYNTLINGLCRTGHTMIALNLF 189
            FNS++  L     +   A ++  ++  GC    P+V+TY  L+NGLC+ G    AL + 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQ--GCASVRPDVVTYGILVNGLCKAGRVGDALRVL 195

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN---PDVVTYN 246
           + M+  + +I    +P+ VT +T++DGLCK G V +A A F++ +  +++   P+ VTYN
Sbjct: 196 DGMSRQDLDI----RPDVVTLNTVVDGLCKSGRVQEALA-FVEQRMSSVHGCPPNTVTYN 250

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI   C   + + A  L  +M ++GV  ++VT N I+  LC+  +   A        +R
Sbjct: 251 CLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFF--REKR 308

Query: 307 GVRP----NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
            V P    NA TY+TL+        +  A ELF    S G   D + Y  +I+G  +   
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +E+A S+   M   G K     YN L  G     ++  A +L  EM+  G+  D  TY T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            + G CK G      EL   +    C+  +  +  L+ G CK G++  A  +  S+    
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           + PN V YN +I  LC  G +D A +LF +M+E +   +V TF+ L+ G    N P K  
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAF 548

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLL 567
           EL+ +M+E++  PD   V ++++ L
Sbjct: 549 ELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 186/363 (51%), Gaps = 23/363 (6%)

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEM--MDQGVQPSVVTFNVIMDELCKNRKMD 294
           ++ PDVVTY  L++GLC A    +A R+   M   D  ++P VVT N ++D LCK+ ++ 
Sbjct: 167 SVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQ 226

Query: 295 EASRLLDLMVQR-----GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
           EA   L  + QR     G  PN  TYN L+D FC +G I+ A EL   ME+ G   + V+
Sbjct: 227 EA---LAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVT 283

Query: 350 YNILINGYCKNKEVEEALSLYRE--MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
            N ++ G C+      AL  +RE   V    K   VTY+TL   L   + V  A++LF E
Sbjct: 284 LNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHE 343

Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
              +G + D   Y T I GL + G + +A  +  +++    +LD +AYN LI G C+  R
Sbjct: 344 KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKR 403

Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
           L  A+EL   +    + P+V TYN ++ G C  G      +L   M ++   P VITF  
Sbjct: 404 LHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGT 463

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK-----------NEISLKS 576
           L+HG+ ++ +  +   +L  M E  + P+  I + ++D L K           +E+  KS
Sbjct: 464 LVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKS 523

Query: 577 LPS 579
           +P+
Sbjct: 524 VPA 526


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 238/485 (49%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN LI    K G  +     +  ++    +P+  T++ L+     +  
Sbjct: 162 MREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRD 221

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +     L  +++A G +PNV +Y   I  L +      A ++  +M +        CKP+
Sbjct: 222 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSG------CKPD 275

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VT++ II  LC  G +  AKA+F +MK  +  PD VTY +L+     + D      ++ 
Sbjct: 276 VVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWN 335

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M+  G   ++V++  ++D LC+  ++DEA  + D M ++G+ P   +YN+L+ GF    
Sbjct: 336 AMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKAD 395

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
             +RA ELF  M + G   +  ++ + IN Y K+ +  +A+  Y  M SKGI P V   N
Sbjct: 396 MFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAAN 455

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +   L    ++  A ++F E++  GV+ DT TYT  I    K     EA+  F  +   
Sbjct: 456 AVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVES 515

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  D+ A N LID L K G+   AW+LF  L    + P   TYN ++ GL  +G++ + 
Sbjct: 516 GCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEV 575

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M      P++IT++ ++    +  E +   ++L+ M EK   PD S  + V+  
Sbjct: 576 MQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYG 635

Query: 567 LVKNE 571
           L+K E
Sbjct: 636 LIKEE 640



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 248/510 (48%), Gaps = 14/510 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V++ N +L SLA +      K     L A G+ P+  TY ++I C  K  +       
Sbjct: 449 PDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNF 508

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ S   P+    NSLI  L+   +  EA  LF KLK    EP   TYNTL++GL R
Sbjct: 509 FSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGR 568

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     + L EEM         +  PN +TY+T++D L K G V+ A  +   M ++  
Sbjct: 569 EGKVKEVMQLLEEMTR------TIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGC 622

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ +YN++++GL       EA R+F +M  + + P   T   I+    KN  M EA  
Sbjct: 623 APDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALH 681

Query: 299 LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            + + +++ G   +  ++++LM+G      + ++ E   ++ S G   +D     LI   
Sbjct: 682 TVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHL 741

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+K+  EA  L+ +    G+     +YN+L  GL + + ++ A  LF EM+R G   D 
Sbjct: 742 CKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDE 801

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   +D + K+  + E +++ + +     E     YN +I GL KS RL+ A +L+ +
Sbjct: 802 FTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYN 861

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L      P   TY  ++ GL   G+M  A +LF +M E    P+   +++L++G      
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGN 921

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
              V +L  KM E+ + PD    +I++D L
Sbjct: 922 TENVCQLFEKMVEQGINPDIKSYTILIDTL 951



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 238/500 (47%), Gaps = 18/500 (3%)

Query: 56  YMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           +MLR   +P P  +  +  A+  +     T+++ T       + N ++      GRV   
Sbjct: 73  HMLR--SAPDPAEALELFTAAARQ----PTKVHTT------ESCNYMLELMRAHGRVGDM 120

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
              F  + +     N  TF ++  G+  E  +  A      ++  G   N  TYN LI  
Sbjct: 121 AQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYF 180

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           L ++G    A+ +++ M     E G+   P+  TYS ++    K+  VD    L  +M+ 
Sbjct: 181 LVKSGFDAEAMEVYKAMV----EDGI--SPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEA 234

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + P+V +Y   I  L  A  ++EA  +  +M D G +P VVT  VI+  LC   ++ +
Sbjct: 235 RGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSD 294

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  +   M     +P+  TY TL+D     G      E++ +M + G   + VSY  +++
Sbjct: 295 AKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVD 354

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
             C+   V+EAL+++ EM  KG+ P   +YN+L  G  +    + AL+LF+ M   G + 
Sbjct: 355 ALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSP 414

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T+  FI+   K+G  ++A++ +  ++      D+ A N ++  L  SGRL  A  +F
Sbjct: 415 NGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVF 474

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             L    + P+ +TY +MI+      + D+A + F DM E+   PDV+  + LI    + 
Sbjct: 475 YELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKG 534

Query: 536 NEPSKVNELLHKMKEKKVMP 555
            + ++  +L HK+KE K+ P
Sbjct: 535 GKGNEAWQLFHKLKEMKIEP 554



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 230/499 (46%), Gaps = 48/499 (9%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
           A G   N+ +Y  +++  C++GRV      F  +     +P   ++NSLI G        
Sbjct: 339 ADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFD 398

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
            A  LF  + A G  PN  T+   IN   ++G ++ A+  +E M +  G +  V   N V
Sbjct: 399 RALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKS-KGIVPDVAAANAV 457

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            YS     L   G +  AK +F ++K   ++PD +TY  +I     A+  +EA   F +M
Sbjct: 458 LYS-----LAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 512

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           ++ G  P V+  N ++D L K  K +EA +L   + +  + P   TYNTL+ G    GK+
Sbjct: 513 VESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKV 572

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
               +L   M       + ++YN +++   KN EV  A+ +   M  KG  P + +YNT+
Sbjct: 573 KEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTV 632

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK- 447
             GL +  ++E A ++F +M++  +A D  T  T +    KNG + EA+   +   ILK 
Sbjct: 633 MYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEY-ILKA 690

Query: 448 -CELDIQAYNCLIDG-----------------------------------LCKSGRLKFA 471
            C +D  +++ L++G                                   LCK  +   A
Sbjct: 691 GCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEA 750

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
            +LF       +     +YN +I+GL ++  +D A DLF +M+     PD  T+++++  
Sbjct: 751 HQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA 810

Query: 532 F---IRINEPSKVNELLHK 547
               +R+ E  KV + +H+
Sbjct: 811 MGKSMRVEEMLKVQKEMHR 829



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 246/526 (46%), Gaps = 48/526 (9%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            NEA+ +F  +  M   P    ++N LL+ L +             +  T   PNL TYN 
Sbjct: 538  NEAWQLFHKLKEMKIEPTN-GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNT 596

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            +++C  K G V+        +      P+ +++N+++ GL  E R+ EA  +F ++K   
Sbjct: 597  VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI- 655

Query: 162  CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
              P+  T  T++    + G    AL+  +E     G     C  +  ++ ++++G+ K+ 
Sbjct: 656  LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAG-----CNVDKSSFHSLMEGILKKA 710

Query: 222  FVDK-----------------------------------AKALFLQMKDENINPDVVTYN 246
             V+K                                   A  LF + K   ++    +YN
Sbjct: 711  GVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYN 770

Query: 247  SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            SLI GL   N  + A+ LF EM   G  P   T+N+I+D + K+ +++E  ++   M ++
Sbjct: 771  SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRK 830

Query: 307  GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            G      TYNT++ G     ++ +A +L+ ++ S G      +Y  L++G  K+ ++ +A
Sbjct: 831  GYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDA 890

Query: 367  LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
             +L+ EM+  G +P    YN L  G       E+  +LF++M   G+  D ++YT  ID 
Sbjct: 891  ENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDT 950

Query: 427  LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
            LC  G + + +  FR L  L  E D+  YN LIDGL KS R++ A  LF  +    ++PN
Sbjct: 951  LCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPN 1010

Query: 487  VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            + TYN +I  L   G+  +A  ++ ++      P V T++ LI G+
Sbjct: 1011 LYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGY 1056



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 245/530 (46%), Gaps = 15/530 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNI 101
           +EA  +FD M     SP   S +N L++   K   +D  L      NA G  PN YT+ +
Sbjct: 363 DEALAVFDEMKEKGMSPEQYS-YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 421

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            IN + K G+       +  +      P+ A  N+++  L    R+  A  +F +LKA G
Sbjct: 422 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMG 481

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ ITY  +I    +      A+N F +M          C P+ +  +++ID L K G
Sbjct: 482 VSPDTITYTMMIKCCSKASKADEAMNFFSDMVESG------CVPDVLALNSLIDTLYKGG 535

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++A  LF ++K+  I P   TYN+L+ GL       E  +L  EM      P+++T+N
Sbjct: 536 KGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYN 595

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D L KN +++ A  +L  M ++G  P+  +YNT+M G     ++  A  +F  M+ +
Sbjct: 596 TVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI 655

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEH 400
               D  +   ++  + KN  ++EAL   +E + K G      ++++L  G+ +   VE 
Sbjct: 656 -LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEK 714

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           +++  + +   G+  +       I  LCK+   +EA +LF   + L   L   +YN LI 
Sbjct: 715 SIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIR 774

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GL     +  A +LF  +      P+  TYN+++  +    ++++   +  +M       
Sbjct: 775 GLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYES 834

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +T++ +I G ++     +  +L + +  +   P       ++D L+K+
Sbjct: 835 TYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKS 884



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 225/499 (45%), Gaps = 49/499 (9%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           EA  ++  M+    SP  V ++++L+ +  K +  DT       + A G+ PN+Y+Y I 
Sbjct: 189 EAMEVYKAMVEDGISPS-VRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTIC 247

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I    +  R    +   G++  S   P+  T   +I+ L    R+ +A A+F K+KA   
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 163 EP-----------------------------------NVITYNTLINGLCRTGHTMIALN 187
           +P                                   N+++Y  +++ LC+ G    AL 
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALA 367

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +F+EM     E G+   P   +Y+++I G  K    D+A  LF  M     +P+  T+  
Sbjct: 368 VFDEMK----EKGM--SPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 421

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
            I+    +    +A + +  M  +G+ P V   N ++  L  + ++  A R+   +   G
Sbjct: 422 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMG 481

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           V P+  TY  ++       K + A   F  M   GC  D ++ N LI+   K  +  EA 
Sbjct: 482 VSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAW 541

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L+ ++    I+PT  TYNTL  GL    +V+  ++L +EM R     +  TY T +D L
Sbjct: 542 QLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCL 601

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            KNG +  A+++  ++    C  D+ +YN ++ GL K  RL+ A+ +FC +   +L P+ 
Sbjct: 602 SKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKK-ILAPDY 660

Query: 488 VTYNIMIQGLCNDGQMDKA 506
            T   ++     +G M +A
Sbjct: 661 ATLCTILPSFVKNGLMKEA 679



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 157/309 (50%), Gaps = 13/309 (4%)

Query: 53   IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCF 106
            +F  M R+   P   + +N++L ++ K+   +  L         G      TYN +I+  
Sbjct: 788  LFTEMKRLGCGPDEFT-YNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGL 846

Query: 107  CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
             K  R+      +  ++   F+P   T+  L+ GL    ++++A  LF ++  +GCEPN 
Sbjct: 847  VKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNC 906

Query: 167  ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
              YN L+NG    G+T     LFE+M     E G+   P+  +Y+ +ID LC  G ++  
Sbjct: 907  TIYNILLNGHRIAGNTENVCQLFEKMV----EQGI--NPDIKSYTILIDTLCTAGRLNDG 960

Query: 227  KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
               F Q+ +  + PD++ YN LI GL  +    EA  LF EM  +G+ P++ T+N ++  
Sbjct: 961  LCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILH 1020

Query: 287  LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            L K  K  EA+++ + ++++G +P+  TYN L+ G+ + G  + A   +G M   GC+ +
Sbjct: 1021 LGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPN 1080

Query: 347  DVSYNILIN 355
              +Y  L N
Sbjct: 1081 SSTYMQLPN 1089



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 171/384 (44%), Gaps = 36/384 (9%)

Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ-PSVVTFNVIMDELCKNRKMDEASRLL 300
           VV  +S++H L  A D  EA  LF     Q  +  +  + N +++ +  + ++ + +++ 
Sbjct: 65  VVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVF 124

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           DLM ++ V+ N  T+ T+  G  + G +  A      M   G   +  +YN LI    K+
Sbjct: 125 DLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKS 184

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
               EA+ +Y+ MV  GI P+V TY+ L +   +   V+  L L +EM+  GV  +  +Y
Sbjct: 185 GFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSY 244

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  I  L +     EA  +   +    C+ D+  +  +I  LC +GRL  A  +F  +  
Sbjct: 245 TICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKA 304

Query: 481 GVLVP-----------------------------------NVVTYNIMIQGLCNDGQMDK 505
               P                                   N+V+Y  ++  LC  G++D+
Sbjct: 305 SDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDE 364

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  +F +M+E   +P+  +++ LI GF++ +   +  EL + M      P+     + ++
Sbjct: 365 ALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFIN 424

Query: 566 LLVKNEISLKSLPSFLVQERQGEV 589
              K+  SLK++  +   + +G V
Sbjct: 425 YYGKSGQSLKAIQRYEHMKSKGIV 448



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 7/135 (5%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
            N+  C F  +  +   P  +  +N+L+  L K++  +        +   G+ PNLYTYN 
Sbjct: 958  NDGLCYFRQLHELGLEPDLIV-YNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNS 1016

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            LI    K G+ +     +  +LR  + P+  T+N+LI+G         A A + ++   G
Sbjct: 1017 LILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGG 1076

Query: 162  CEPNVITYNTLINGL 176
            C+PN  TY  L N L
Sbjct: 1077 CQPNSSTYMQLPNQL 1091


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 209/416 (50%), Gaps = 6/416 (1%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           ++  +N L++ +CK G +     A  R+       +   +N+L+ GL        A  + 
Sbjct: 200 DVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGML 259

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
             +K  G EPNV+TY T I   CRT     A +L+EEM      +GV+  P+ VT S ++
Sbjct: 260 ETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMV----RMGVL--PDVVTLSALV 313

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           DGLC+ G   +A ALF +M+     P+ VTY +LI  L  A   +E+  L  E++ +GV 
Sbjct: 314 DGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVV 373

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
             +V +  +MD L K  K+DE   +    +     PN  TY  L+D  C  G ++ AE++
Sbjct: 374 MDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQM 433

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
              ME      + V+++ +ING  K   + +A    R+M  +GI P VVTY T+  G F+
Sbjct: 434 LLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFK 493

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
             + E AL L+ EM  +GV  +       ++GL KNG + EA  LFR +      LD   
Sbjct: 494 CQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVN 553

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           Y  LIDGL K G +  A+++   L    L P+ V YN+ +  LC  G+  +A  + 
Sbjct: 554 YTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 229/482 (47%), Gaps = 40/482 (8%)

Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIME-AAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           +LR+  + +  ++N +I GL  + R    A AL  ++   G   + +T NT +  LCR G
Sbjct: 119 LLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDG 178

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  L E M  G      + + + V ++ ++DG CK G ++ A     +M+ + +  
Sbjct: 179 QVEGAAALAEMMVRGR----EIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGV 234

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DVV YN+L+ GLC A + + A+ +   M   GV+P+VVT+   + E C+   +D+A  L 
Sbjct: 235 DVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLY 294

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + MV+ GV P+  T + L+DG C  G+ + A  LF  ME +G   + V+Y  LI+   K 
Sbjct: 295 EEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKA 354

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           +   E+  L  E+VS+G+   +V Y +L   L +  +++    +F     D    +  TY
Sbjct: 355 RRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTY 414

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
           T  ID LC+ G +  A ++   +       ++  ++ +I+GL K G L  A +    +  
Sbjct: 415 TVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKE 474

Query: 481 GVLVPNVVTY-----------------------------------NIMIQGLCNDGQMDK 505
             + PNVVTY                                   ++++ GL  +G+M++
Sbjct: 475 RGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEE 534

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A  LF DM +     D + +  LI G  ++       ++  ++ E+ + PDA + ++ V+
Sbjct: 535 AEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVN 594

Query: 566 LL 567
            L
Sbjct: 595 CL 596



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 203/413 (49%), Gaps = 17/413 (4%)

Query: 165 NVITYNTLINGLCRTG-HTMIALNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCK 219
           + ++YN +I+GL   G H  +A  L  EM          CK     + VT +T +  LC+
Sbjct: 127 DTVSYNVVISGLTEQGRHGGLAPALLAEM----------CKRGVPFDAVTVNTALVALCR 176

Query: 220 EGFVDKAKALF-LQMKDENINP-DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           +G V+ A AL  + ++   I+  DVV +N+L+ G C + D   A      M  QGV   V
Sbjct: 177 DGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDV 236

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           V +N ++  LC+  + D A  +L+ M   GV PN  TY T +   C    ++ A  L+  
Sbjct: 237 VGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEE 296

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M  MG   D V+ + L++G C+     EA +L+REM   G  P  VTY TL   L++  +
Sbjct: 297 MVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARR 356

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
              +  L  E+   GV  D   YT+ +D L K G I E  ++F          +   Y  
Sbjct: 357 GSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTV 416

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           LID LC++G +  A ++   +    + PNVVT++ +I GL   G + KA D    M+E  
Sbjct: 417 LIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERG 476

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             P+V+T+  ++ GF +  E     +L H+M  + V  +  IV ++V+ L KN
Sbjct: 477 IDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKN 529


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 235/472 (49%), Gaps = 12/472 (2%)

Query: 102 LINCFCKIGRVSLGFIAFGRILR-SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           ++ C C +G++      F  ++   C  P       L K   AE  +     +  + +  
Sbjct: 5   IVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLR 64

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
             E +++  N  I+ LC++     A + F+E+ +  G +      NTV+Y+ +I+  CK 
Sbjct: 65  --ERHLV--NITIDSLCKSDMIDKAESWFQELKDFRGLV------NTVSYNILINAFCKT 114

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
             +D+A  LF +MK     P   TYN+LI GLC      EA++ +  ++  G   S +T+
Sbjct: 115 KRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITY 174

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N+++D  CK  ++ EA  LL+ +V RG    +  YN ++D     GKI+ AE  F  ME 
Sbjct: 175 NILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEK 234

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G +  +V++ +LI+G CK   V  A  ++   +  G  P+VV  + L  G  +   V+ 
Sbjct: 235 DGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDE 294

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           A ++F+ M   G   +  +    I+GLCK   + +A E+F  +   + + D+  Y+  +D
Sbjct: 295 AWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMD 354

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF-LDMEENAAA 519
           GLC++ R+  A ++ C L      P+VV Y  +I GLC+ G++D+AR +F +DM     A
Sbjct: 355 GLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCA 414

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           P+  T ++L++GF       +  EL  +  E+ V PD    S + +   K E
Sbjct: 415 PNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTE 466



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 198/380 (52%), Gaps = 8/380 (2%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  +YNILIN FCK  R+      FG +      P+ +T+N+LI GL    R+ EA   +
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159

Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
            +L + G   + ITYN L++G C+      A+ L  E+    G +       +  Y+ II
Sbjct: 160 ERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVV------TSAPYNCII 213

Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
           D L K+G + +A+  F +M+ + + P  VT+  LI GLC AN    AK +F   ++ G  
Sbjct: 214 DTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGS 273

Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
           PSVV  + +MD  CK   +DEA R+ +LM  RG  PN  + N L++G C   ++++A E+
Sbjct: 274 PSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREV 333

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           F  +     K D V+Y+  ++G C+   V++A  +   +V KG  P VV Y  L  GL  
Sbjct: 334 FEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCS 393

Query: 395 IHQVEHALKLFD-EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           + +++ A K+F+ +M+  G A +  T    ++G    G + EA ELF+       + D +
Sbjct: 394 LGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCR 453

Query: 454 AYNCLIDGLCKS-GRLKFAW 472
            ++ + +   K+ G   ++W
Sbjct: 454 TFSAMANNTAKTEGWDIYSW 473



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 180/369 (48%), Gaps = 13/369 (3%)

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           S+NIL+ +  K K  D        + A G  P+  TYN LI   C++ R+      + R+
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
           L S    +  T+N L+ G     R+ EA  L  +L A G       YN +I+ L + G  
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKI 222

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A   F  M       GV  +P  VT++ +IDGLCK   V +AK +F    +   +P V
Sbjct: 223 HEAELFFNRMEKD----GV--RPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSV 276

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           V  + L+ G C     +EA R+F  M ++G  P+ V+ N++++ LCK +++ +A  + + 
Sbjct: 277 VICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEE 336

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           +V+R  +P+  TY+T MDG C   ++++A ++   +   G   D V Y  LI+G C    
Sbjct: 337 VVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGR 396

Query: 363 VEEALSLYR-EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           ++EA  ++  +M + G  P   T N L  G     +++ A +LF      GV  D RT++
Sbjct: 397 LDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456

Query: 422 TFIDGLCKN 430
              +   K 
Sbjct: 457 AMANNTAKT 465


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 263/550 (47%), Gaps = 29/550 (5%)

Query: 35  LTTREGDINVITPNEAFCIFDYML--RMHPSPPPVSSFNIL-LASLAKNKHYD-----TR 86
           L +R   + + +  +A  +FD +   R    P P ++F  L LA  +  +H +     +R
Sbjct: 110 LYSRAVSVLLASEPDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSR 169

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +      P  + YN +       G + L    + R++ S   PN+ T+  L+ GL     
Sbjct: 170 MGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGM 229

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            ++A  +F ++   G  P+V  Y  L++ LC  G    A  L   M   NG     C P+
Sbjct: 230 AVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKE-NG-----CPPD 283

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VTY+  + GLCK G VD+A   F  ++D      ++ Y+ LI GL  A  ++E    + 
Sbjct: 284 EVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYT 343

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM+ + + P +  + +++    +  +  +A  LLD M  +G  P+   YNTL+     +G
Sbjct: 344 EMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVG 403

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            I+RA+ L   M       D  ++NI+I G CK   +++A+ ++ EM   G  PTV+TYN
Sbjct: 404 NIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYN 463

Query: 387 TLFLGLFEIHQVEHALKLFDEMQ---------RDGVAA----DTRTYTTFIDGLCKNGYI 433
            L  GL+    +E A  LF +M+         R  + A    DT +    +DG+C++G +
Sbjct: 464 ALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQV 523

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
           ++A +L R +       D+  YN LI+GLCK+  L  A  LF  L    + P+ +TY  +
Sbjct: 524 LKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTL 583

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK-VNELLHKMKEK- 551
           I GL    + + A  LF ++  +   P +  ++ ++    R+ + S+ +N  L  + +K 
Sbjct: 584 IDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKY 643

Query: 552 KVMPDASIVS 561
            + P+  +++
Sbjct: 644 NLSPEDEVIA 653



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 212/490 (43%), Gaps = 55/490 (11%)

Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
            P+AA F +L+    +  R  EA   F+++  F C P    YN +   L   G  ++AL 
Sbjct: 142 APSAA-FRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALA 200

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L+  M +        C PN+ TY  ++DGLCK G    A  +F +M +  I PDV  Y  
Sbjct: 201 LYNRMVSSG------CLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTV 254

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+  LC+     +A RL   M + G  P  VT+ V +  LCK  ++DEA    +L+   G
Sbjct: 255 LLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGG 314

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
                  Y+ L+DG    G+ +     +  M       D   Y ILI  + +    ++A 
Sbjct: 315 FTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAF 374

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L  EM  KG  P    YNTL   LF++  ++ A  L  EM ++ V  D+ T+   I GL
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL 434

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL------------------------- 462
           CK G I +A+++F  +    C   +  YN LIDGL                         
Sbjct: 435 CKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLF 494

Query: 463 -----------------------CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
                                  C+SG++  A++L   +    +VP+VVTYN +I GLC 
Sbjct: 495 LRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCK 554

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
              +D A  LF +++    +PD IT+  LI G  R +  +    L   +      P   I
Sbjct: 555 AKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPI 614

Query: 560 VSIVVDLLVK 569
            + ++  L +
Sbjct: 615 YNTMMRSLCR 624



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 223/516 (43%), Gaps = 94/516 (18%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ ++G  PN  TY +L++  CK G        F  +L     P+   +  L+  L  E 
Sbjct: 204 RMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEG 263

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           RI +A  L   +K  GC P+ +TY   ++GLC+ G    A + FE + +G   +G++   
Sbjct: 264 RIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI--- 320

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
               YS +IDGL + G  D+  + + +M  ++I+PD+  Y  LI     A    +A  L 
Sbjct: 321 ---GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLL 377

Query: 266 IEMMDQGVQPSVVTFN--------------------------VIMDE---------LCKN 290
            EM D+G  P    +N                          V++D          LCK 
Sbjct: 378 DEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKK 437

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME----------- 339
             +D+A ++ D M + G  P   TYN L+DG    G +  A  LF  ME           
Sbjct: 438 GLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRL 497

Query: 340 SMGCKH--DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ++G     D  S   L++G C++ +V +A  L R ++  G+ P VVTYNTL  GL +   
Sbjct: 498 TLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKN 557

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           ++ AL+LF E+Q  G++ D  TY T IDGL +     +A  LF+ +        +  YN 
Sbjct: 558 LDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNT 617

Query: 458 LIDGLCKSGRLKFAWELFCS-LP------------------------------------- 479
           ++  LC+  +L  A  L+   LP                                     
Sbjct: 618 MMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQV 677

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           +G L PN   Y I + GLC   ++D A  +F  +EE
Sbjct: 678 YGSLNPN--PYTIWVIGLCQVRKIDDALRIFHILEE 711



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 228/519 (43%), Gaps = 64/519 (12%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNIL 102
           +A  +FD ML      P V  + +LL+SL      +        +   G  P+  TY + 
Sbjct: 232 DALKMFDEMLE-RGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVF 290

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           ++  CK GRV   F  F  +    FT     ++ LI GL    R  E  + +T++     
Sbjct: 291 LSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSI 350

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P++  Y  LI      G T  A  L +EM +     G V  P+T  Y+T++  L   G 
Sbjct: 351 SPDITLYTILIRRFAEAGRTKDAFLLLDEMKDK----GFV--PDTFCYNTLLKALFDVGN 404

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +D+A++L  +M   N+  D  T+N +I GLC     ++A ++F EM + G  P+V+T+N 
Sbjct: 405 IDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNA 464

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRP--------------NACTYNTLMDGFCLMGKI 328
           ++D L +   ++EA R+L   ++ G  P              +  +   L+DG C  G++
Sbjct: 465 LIDGLYRAGMLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQV 523

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
            +A +L   +   G   D V+YN LING CK K ++ AL L++E+  KGI P  +TY TL
Sbjct: 524 LKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTL 583

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK------------------- 429
             GL+  H+   A  LF  + R G       Y T +  LC+                   
Sbjct: 584 IDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKY 643

Query: 430 -----------------NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
                            +G++ E V+    +  +   L+   Y   + GLC+  ++  A 
Sbjct: 644 NLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDAL 703

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
            +F  L    +V       ++I  LC D  ++ A D+ +
Sbjct: 704 RIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMM 742



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 193/437 (44%), Gaps = 22/437 (5%)

Query: 149 EAAALFTKL---KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +A A+F  L   +A G       +  L+      G    A+  F  M + +      C+P
Sbjct: 124 DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFD------CRP 177

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
               Y+ +   L   G +  A AL+ +M      P+  TY  L+ GLC      +A ++F
Sbjct: 178 TAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMF 237

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM+++G+ P V  + V++  LC   ++++A RLL  M + G  P+  TY   + G C  
Sbjct: 238 DEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKA 297

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+++ A   F  ++  G     + Y+ LI+G  +    +E LS Y EM+ K I P +  Y
Sbjct: 298 GRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLY 357

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
             L     E  + + A  L DEM+  G   DT  Y T +  L   G I  A  L   +  
Sbjct: 358 TILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQ 417

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
               LD   +N +I GLCK G +  A ++F  +      P V+TYN +I GL   G +++
Sbjct: 418 NNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEE 477

Query: 506 ARDLFLDMEEN-------------AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
           AR LF  ME                   D  +   L+ G  +  +  K  +LL  + E  
Sbjct: 478 ARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESG 537

Query: 553 VMPDASIVSIVVDLLVK 569
           V+PD    + +++ L K
Sbjct: 538 VVPDVVTYNTLINGLCK 554



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 204/433 (47%), Gaps = 26/433 (6%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           Y T +    + P++  Y ILI  F + GR    F+    +    F P+   +N+L+K L 
Sbjct: 341 YYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALF 400

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
               I  A +L +++       +  T+N +I GLC+ G    A+ +F+EM    GE G  
Sbjct: 401 DVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEM----GEHG-- 454

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP--------------DVVTYNSL 248
           C P  +TY+ +IDGL + G +++A+ LF +M+  N NP              D  +   L
Sbjct: 455 CHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGN-NPSLFLRLTLGANQVRDTESLRKL 513

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           + G+C +    +A +L   +++ GV P VVT+N +++ LCK + +D A RL   +  +G+
Sbjct: 514 VDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGI 573

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P+  TY TL+DG     + N A  LF ++   G       YN ++   C+ K++ +A++
Sbjct: 574 SPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAIN 633

Query: 369 LYREMVSK--GIKPT-VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           L+ + + K   + P   V  N      FE   ++  +K   ++ +   + +   YT ++ 
Sbjct: 634 LWLDYLPKKYNLSPEDEVIANA--RKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVI 691

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GLC+   I +A+ +F  L      +       LI+ LC    L  A ++         + 
Sbjct: 692 GLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIV 751

Query: 486 NVVTYNIMIQGLC 498
           +    N +++ LC
Sbjct: 752 SQPVGNRLLRSLC 764



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 3/282 (1%)

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
           RP A  YN +       G I  A  L+  M S GC  +  +Y +L++G CK     +AL 
Sbjct: 176 RPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALK 235

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++ EM+ +GI P V  Y  L   L    ++E A +L   M+ +G   D  TYT F+ GLC
Sbjct: 236 MFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLC 295

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           K G + EA   F  L+     L +  Y+CLIDGL ++GR       +  +    + P++ 
Sbjct: 296 KAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDIT 355

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            Y I+I+     G+   A  L  +M++    PD   ++ L+     +    +   L+ +M
Sbjct: 356 LYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEM 415

Query: 549 KEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
            +  V+ D++  +I++  L K  +  K++  F   +  GE G
Sbjct: 416 LQNNVVLDSTTHNIMICGLCKKGLIDKAMQVF---DEMGEHG 454


>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 240/507 (47%), Gaps = 13/507 (2%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIG 110
           M R+ P P   S+FNILL  +    +      +   +  +G  P+  +   ++  +  +G
Sbjct: 1   MKRLGPYPN-ASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLG 59

Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYN 170
            +      F  +LR  + P   T N LI  L       EA  +F  L   GC     +YN
Sbjct: 60  SLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYN 119

Query: 171 TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
            ++  LC+ G +  AL L   +     ++G V   N  +Y+ ++ G  KEG  ++A  + 
Sbjct: 120 PILWALCKCGQSYTALALLYSLK----KMGAV--HNAASYTALVYGFSKEGLWEEAFCML 173

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
            +MK +   P+V+TY  ++  LC      +A  +  +M  +G  P +VT+NVI+ EL   
Sbjct: 174 DEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQ 233

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            +  E   LL ++ Q+ + P++ TY  L  G     ++  A +L   + S GC  D   Y
Sbjct: 234 DRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVY 293

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           NI  +  C+  +  EALSL + MV KG+ PT V+YNT+  G    + ++ AL+LFD  + 
Sbjct: 294 NIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEW 353

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
              + D  ++ T +   CK G       +   +     +L++ +  CLI   C  G++  
Sbjct: 354 ANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISE 413

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
             EL  S+    L P VVT+N+++  LC +G +  A  +F +       P+  ++++LIH
Sbjct: 414 CLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIH 473

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDA 557
             IR    S V +LL  M   ++ PDA
Sbjct: 474 ASIREGNDSLVEQLLRDMYSWRLKPDA 500



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 261/568 (45%), Gaps = 19/568 (3%)

Query: 19  SAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMH--PSPPPVSSFNILL-- 74
           S F  +F+SLL   +        + + +  ++  +F++MLR+   P+ P ++    +L  
Sbjct: 39  SGFLPSFTSLLKILKKW------LGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSK 92

Query: 75  ASLAKNKHYDTR-LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
           A +A+  H+  R L   G     ++YN ++   CK G+          + +     NAA+
Sbjct: 93  AGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAAS 152

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           + +L+ G   E    EA  +  ++K  GC+PNVITY  ++  LC  G    AL++  +M 
Sbjct: 153 YTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKM- 211

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
              G+ G  C P+ VTY+ I+  L  +    +   L   +  + I+PD  TY +L  GL 
Sbjct: 212 ---GKEG--CDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLL 266

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             +    A +L + ++  G    V  +N+    LC+  K  EA  LL  MV++G+ P   
Sbjct: 267 KRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNV 326

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +YNT+++GFC    I+ A +LF   E      D VS+N +++  CK         +   M
Sbjct: 327 SYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRM 386

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
             +G+K  VV+   L      I ++   L+L + M R+G+     T+   +D LCKNG +
Sbjct: 387 EYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLL 446

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
             A  +FR  R      +  +YN LI    + G      +L   +    L P+ VTY   
Sbjct: 447 GTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSF 506

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I+GLC +G++  A  L   M E+   P +  ++ ++    +  +   +  LL  M     
Sbjct: 507 IKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGC 566

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFL 581
            P+A  + I+   + K    +K  P F+
Sbjct: 567 EPNAVSIEILKQAMSK--CWMKRFPEFI 592



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 140/310 (45%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   G  P+  TFN+++D +     +  A    + M + G  P+  +   ++  +  +G 
Sbjct: 1   MKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGS 60

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
           +  +  +F  M  +     + + N+LI+   K     EA  ++R ++ KG      +YN 
Sbjct: 61  LVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNP 120

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +   L +  Q   AL L   +++ G   +  +YT  + G  K G   EA  +   ++I  
Sbjct: 121 ILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDG 180

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
           C+ ++  Y  ++  LC  GR+  A ++   +      P++VTYN++++ L +  +  +  
Sbjct: 181 CKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIG 240

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           +L   +++   +PD  T+  L  G ++ ++    N+LL  +       D ++ +I    L
Sbjct: 241 ELLQVIDQKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCL 300

Query: 568 VKNEISLKSL 577
            +   S ++L
Sbjct: 301 CRENKSGEAL 310


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 204/404 (50%), Gaps = 7/404 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P+  +Y ++   +C++GR+S        ++R  F  + AT   +I     +  
Sbjct: 222 MRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGF 281

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
                  F K    G +PN+I + +LINGLC+ G    A  + EEM           KPN
Sbjct: 282 ASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGW------KPN 335

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQM-KDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             T++ +IDGLCK+G+ +KA  LFL++ + ++  P+V TY S+IHG C  +  N A+ L 
Sbjct: 336 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLL 395

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M +QG+ P+  T+  ++D   K    ++A  L+DLM + G   N  TYN  +D  C  
Sbjct: 396 SRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKK 455

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+   A +L      +G + D V+Y ILI+  C+  +  EAL  + +M   G++P + TY
Sbjct: 456 GRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTY 515

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           NTL        ++E + KLF E    G+     TYT+ I G C++  +  A++ F  +  
Sbjct: 516 NTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSD 575

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
             C  D   Y  LI GLCK  +L  A +L+ ++    L P  VT
Sbjct: 576 HGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVT 619



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 190/407 (46%), Gaps = 7/407 (1%)

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +F +++  G  P+ ++Y  +    CR G         ++M       G V    T T
Sbjct: 215 AENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRR----GFVVDNATCT 270

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
              +I   C++GF  +    F +  +  + P+++ + SLI+GLC      +A  +  EM+
Sbjct: 271 L--MISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMV 328

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRL-LDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
            +G +P+V T   ++D LCK    ++A RL L L+     +PN  TY +++ G+C   K+
Sbjct: 329 KKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKL 388

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           NRAE L   M+  G   +  +Y  LI+G+ K    E+A  L   M  +G    + TYN  
Sbjct: 389 NRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAF 448

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
              L +  +   A KL  +  R G+ ADT TYT  I  LC+     EA+  F  +     
Sbjct: 449 IDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGV 508

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
           + D+  YN LI    +  R++ + +LF       LVP   TY  MI G C D  +  A  
Sbjct: 509 QPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALK 568

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
            F  M ++   PD +T+  LI G  + ++  +  +L   M +K + P
Sbjct: 569 FFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSP 615



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 187/389 (48%), Gaps = 10/389 (2%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           GL PNL  +  LIN  CK G +   F     +++  + PN  T  +LI GL  +    +A
Sbjct: 296 GLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKA 355

Query: 151 AALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
             LF KL ++   +PNV TY ++I+G C+       LN  E + +   E G+V  PNT T
Sbjct: 356 FRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDK----LNRAEMLLSRMKEQGLV--PNTKT 409

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+ +IDG  K G  +KA  L   M  E  + ++ TYN+ I  LC    + EA +L  +  
Sbjct: 410 YTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGF 469

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
             G+Q   VT+ +++ ELC+     EA      M + GV+P+  TYNTL+  F    ++ 
Sbjct: 470 RLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRME 529

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            +E+LF     +G      +Y  +I GYC+++ V  AL  +  M   G  P  +TY  L 
Sbjct: 530 ESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALI 589

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  +++ A +L++ M   G++    T  T     CK     ++      L  L  +
Sbjct: 590 SGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQD---DSATAMVILERLDKK 646

Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           L I+  N LI  LC   ++  A   F  L
Sbjct: 647 LWIRTVNTLIRKLCSERKVGMAVLFFHKL 675



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 190/425 (44%), Gaps = 7/425 (1%)

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           +  EA  +  +++  G    V T N +       G    A N+F+EM      +  VC P
Sbjct: 176 KFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEM-----RVRGVC-P 229

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           ++V+Y  +    C+ G +         M       D  T   +I   C     +     F
Sbjct: 230 DSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYF 289

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            + ++ G++P+++ F  +++ LCK   + +A  +L+ MV++G +PN  T+  L+DG C  
Sbjct: 290 DKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKK 349

Query: 326 GKINRAEELFGSM-ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           G   +A  LF  +  S   K +  +Y  +I+GYCK  ++  A  L   M  +G+ P   T
Sbjct: 350 GWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKT 409

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
           Y  L  G  +    E A +L D M ++G +A+  TY  FID LCK G  +EA +L +   
Sbjct: 410 YTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGF 469

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            L  + D   Y  LI  LC+    + A   F  +    + P++ TYN +I       +M+
Sbjct: 470 RLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRME 529

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++  LF +       P   T+  +I G+ R    S   +  ++M +    PD+     ++
Sbjct: 530 ESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALI 589

Query: 565 DLLVK 569
             L K
Sbjct: 590 SGLCK 594



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 181/421 (42%), Gaps = 24/421 (5%)

Query: 164 PNVITYN---TLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           P+ +T+    T++  L     +M+AL+ F      N  IG         Y      +C  
Sbjct: 100 PDSLTHEQAITVVASLASEAGSMVALSFF------NWAIGF----PKFRYFMRFYIVCAT 149

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
            F+           +EN        + ++        + EA  + IEM + G+  +V T 
Sbjct: 150 SFIG----------NENFERAHEVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTL 199

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N +     +   +  A  + D M  RGV P++ +Y  +   +C MG+I+  +     M  
Sbjct: 200 NCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVR 259

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
            G   D+ +  ++I+ +C+          + + V  G+KP ++ + +L  GL +   ++ 
Sbjct: 260 RGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQ 319

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLI 459
           A ++ +EM + G   +  T+T  IDGLCK G+  +A  LF + +R    + ++  Y  +I
Sbjct: 320 AFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMI 379

Query: 460 DGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAA 519
            G CK  +L  A  L   +    LVPN  TY  +I G    G  +KA +L   M +   +
Sbjct: 380 HGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFS 439

Query: 520 PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPS 579
            ++ T++  I    +     +  +LL K     +  D    +I++  L +   + ++L  
Sbjct: 440 ANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVF 499

Query: 580 F 580
           F
Sbjct: 500 F 500



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 16/216 (7%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT--RLNAT----GLFPNLYTYNIL 102
           EA   F  M +    P  + ++N L+A+ ++ +  +   +L A     GL P   TY  +
Sbjct: 495 EALVFFSKMFKAGVQPD-MHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSM 553

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I  +C+   VSL    F R+     TP++ T+ +LI GL  ES++ EA  L+  +   G 
Sbjct: 554 ICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGL 613

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
            P  +T  TL    C+   +  A+ + E +           K    T +T+I  LC E  
Sbjct: 614 SPCEVTRLTLAYEYCKQDDSATAMVILERLDK---------KLWIRTVNTLIRKLCSERK 664

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
           V  A   F ++ D++ N D VT  +       +N +
Sbjct: 665 VGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKY 700



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 75/188 (39%)

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           EI + + A+ +  EM+  G+    RT         + G +  A  +F  +R+     D  
Sbjct: 173 EIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSV 232

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
           +Y  +    C+ GR+         +     V +  T  +MI   C  G   +    F   
Sbjct: 233 SYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKW 292

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
            E    P++I F  LI+G  +     +  E+L +M +K   P+    + ++D L K   +
Sbjct: 293 VELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWT 352

Query: 574 LKSLPSFL 581
            K+   FL
Sbjct: 353 EKAFRLFL 360


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 234/485 (48%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN L+    K G        +  ++     P+  T++ L+        
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +     L  +++A G +PNV +Y   I  L +      A  +  +M N        CKP+
Sbjct: 211 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPD 264

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T++ +I  LC  G +  AK +F +MK  +  PD VTY +L+       D      ++ 
Sbjct: 265 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 324

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G   +VV +  ++D LC+  ++ EA  + D M Q+G+ P   +YN+L+ GF    
Sbjct: 325 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 384

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +   A ELF  M+  G K +  ++ + IN Y K+ E  +A+  Y  M SKGI P VV  N
Sbjct: 385 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 444

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL +  ++  A ++F E++  GV+ DT TYT  I    K     EAV++F  +   
Sbjct: 445 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 504

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  D+ A N LID L K+GR   AW +F  L    L P   TYN ++ GL  +G++ + 
Sbjct: 505 NCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 564

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M  +   P++IT++ ++    +    +   ++L+ M  K  +PD S  + V+  
Sbjct: 565 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 624

Query: 567 LVKNE 571
           LVK E
Sbjct: 625 LVKEE 629



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 244/512 (47%), Gaps = 14/512 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N +L  LAK+      K     L A G+ P+  TY ++I C  K  +       
Sbjct: 438 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 497

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ +   P+    NSLI  L+   R  EA  +F +LK    EP   TYNTL+ GL R
Sbjct: 498 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 557

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     ++L EEM + N        PN +TY+TI+D LCK G V+ A  +   M  +  
Sbjct: 558 EGKVKEVMHLLEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 611

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ +YN++I+GL     +NEA  +F +M  + + P   T   I+    K   M EA  
Sbjct: 612 IPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALH 670

Query: 299 LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           ++ D  +Q G + +  + ++LM+G      I ++ E    + S G   DD     LI   
Sbjct: 671 IIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 730

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK K+  EA  L ++  S G+      YN+L  GL + + ++ A  LF EM+  G   D 
Sbjct: 731 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 790

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   +D + K+  I E +++   +     E     YN +I GL KS RL+ A +L+ +
Sbjct: 791 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 850

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L      P   TY  ++ GL   G+++ A +LF +M E     +   +++L++G      
Sbjct: 851 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 910

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             KV  L   M ++ + PD    +I++D L K
Sbjct: 911 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 942



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 250/522 (47%), Gaps = 40/522 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
            +EA+ IF Y L+     P   ++N LLA L +        H    +  +   PNL TYN 
Sbjct: 527  DEAWRIF-YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 585

Query: 102  LINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +++C CK G V+    + +    + C  P+ +++N++I GL  E R  EA ++F ++K  
Sbjct: 586  ILDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 644

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI-----------GVVCKPN--- 206
               P+  T  T++    + G    AL++ ++     G             G++ K     
Sbjct: 645  -LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 703

Query: 207  TVTYSTIIDG----------------LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
            ++ ++ II                  LCK+    +A  L  + K   ++     YNSLI 
Sbjct: 704  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 763

Query: 251  GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            GL   N  + A+ LF EM + G  P   T+N+++D + K+ +++E  ++ + M ++G   
Sbjct: 764  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 823

Query: 311  NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               TYNT++ G     ++ +A +L+ ++ S G      +Y  L++G  K   +E+A +L+
Sbjct: 824  TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 883

Query: 371  REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             EM+  G K     YN L  G       E    LF +M   G+  D ++YT  ID LCK 
Sbjct: 884  NEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 943

Query: 431  GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            G + + +  FR L  +  E D+  YN LIDGL KS RL+ A  LF  +    +VPN+ TY
Sbjct: 944  GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1003

Query: 491  NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            N +I  L   G+  +A  ++ ++      P+V T++ LI G+
Sbjct: 1004 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1045



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 214/446 (47%), Gaps = 6/446 (1%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           GRV      F  + R     N  TF ++  GL  E  +  A      +K  G   N  TY
Sbjct: 104 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 163

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N L+  L ++G    AL ++  M       GVV  P+  TYS ++    K   V+    L
Sbjct: 164 NGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWL 217

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+   + P+V +Y   I  L  A  ++EA R+  +M ++G +P V+T  V++  LC 
Sbjct: 218 LREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD 277

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             ++ +A  +   M +   +P+  TY TL+D F   G      E++ +M++ G   + V+
Sbjct: 278 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 337

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  +I+  C+   V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  M 
Sbjct: 338 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 397

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   +  T+  FI+   K+G  I+A++ +  ++      D+ A N ++ GL KSGRL 
Sbjct: 398 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 457

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  +F  L    + P+ +TY +MI+      + D+A  +F DM EN   PDV+  + LI
Sbjct: 458 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 517

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMP 555
               +     +   + +++KE  + P
Sbjct: 518 DTLYKAGRGDEAWRIFYQLKEMNLEP 543



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 225/470 (47%), Gaps = 12/470 (2%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLN-----ATGLFPNLYTYNILINCFCKIGRVSLGF-IA 118
            P +SS+N ++  L K + Y+   +        L P+  T   ++  F KIG +     I 
Sbjct: 613  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHII 672

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
                L+     + ++ +SL++G+  ++ I ++      + + G   +      LI  LC+
Sbjct: 673  KDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCK 732

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                + A  L ++  +     GV  K  T  Y+++I GL  E  +D A+ LF +MK+   
Sbjct: 733  QKKALEAHELVKKFKS----FGVSLK--TGLYNSLICGLVDENLIDIAEGLFAEMKELGC 786

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             PD  TYN L+  +  +    E  ++  EM  +G + + VT+N I+  L K+R++++A  
Sbjct: 787  GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAID 846

Query: 299  LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L   ++ +G  P  CTY  L+DG    G+I  AE LF  M   GCK +   YNIL+NG+ 
Sbjct: 847  LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 906

Query: 359  KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 E+   L+++MV +GI P + +Y  +   L +  Q+   L  F ++   G+  D  
Sbjct: 907  IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 966

Query: 419  TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            TY   IDGL K+  + EAV LF  ++      ++  YN LI  L K+G+   A +++  L
Sbjct: 967  TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026

Query: 479  PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
                  PNV TYN +I+G    G  D A   +  M      P+  T+  L
Sbjct: 1027 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 216/464 (46%), Gaps = 17/464 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           +  H   P V S+ I +  L + K +D       ++   G  P++ T+ +LI   C  GR
Sbjct: 221 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 280

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +S     F ++ +S   P+  T+ +L+              ++  +KA G   NV+ Y  
Sbjct: 281 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 340

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I+ LC+ G    AL +F+EM     + G+V  P   +Y+++I G  K      A  LF 
Sbjct: 341 VIDALCQVGRVFEALEMFDEMK----QKGIV--PEQYSYNSLISGFLKADRFGDALELFK 394

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M      P+  T+   I+    + +  +A + +  M  +G+ P VV  N ++  L K+ 
Sbjct: 395 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 454

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++  A R+   +   GV P+  TY  ++       K + A ++F  M    C  D ++ N
Sbjct: 455 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 514

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+   K    +EA  ++ ++    ++PT  TYNTL  GL    +V+  + L +EM   
Sbjct: 515 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 574

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
               +  TY T +D LCKNG + +A+++  ++    C  D+ +YN +I GL K  R   A
Sbjct: 575 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 634

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA----RDLFL 511
           + +FC +   VL+P+  T   ++      G M +A    +D FL
Sbjct: 635 FSIFCQMKK-VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 677



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 198/438 (45%), Gaps = 46/438 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIG-----------VVCKPNTVTYSTIIDGLCKEGFVDKA 226
           R  HT  + N   E+  G+G +G            + K N  T++ I  GL  EG +  A
Sbjct: 85  RVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSA 144

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 MK+  I  +  TYN L++ L  +    EA  ++  MM  GV PSV T++V+M  
Sbjct: 145 PVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVA 204

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K R ++    LL  M   GV+PN  +Y   +       + + A  +   ME+ GCK D
Sbjct: 205 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 264

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            +++ +LI   C    + +A  ++ +M     KP  VTY TL     +    +  +++++
Sbjct: 265 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 324

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M+ DG   +   YT  ID LC+ G + EA+E+F  ++      +  +YN LI G  K+ 
Sbjct: 325 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 384

Query: 467 RLKFAWELFCSL------PHGV-----------------------------LVPNVVTYN 491
           R   A ELF  +      P+G                              +VP+VV  N
Sbjct: 385 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 444

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++ GL   G++  A+ +F +++    +PD IT+ M+I    + ++  +  ++ + M E 
Sbjct: 445 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 504

Query: 552 KVMPDASIVSIVVDLLVK 569
             +PD   V+ ++D L K
Sbjct: 505 NCVPDVLAVNSLIDTLYK 522



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 12/297 (4%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P   ++N+LL ++ K+   +  L         G      TYN +I+   K  R+      
Sbjct: 788  PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 847

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            +  ++   F+P   T+  L+ GL    RI +A  LF ++  +GC+ N   YN L+NG   
Sbjct: 848  YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 907

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G+T    +LF++M +          P+  +Y+ IID LCK G ++     F Q+ +  +
Sbjct: 908  AGNTEKVCHLFQDMVDQG------INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGL 961

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             PD++TYN LI GL  +    EA  LF EM  +G+ P++ T+N ++  L K  K  EA +
Sbjct: 962  EPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGK 1021

Query: 299  LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
            + + ++ +G +PN  TYN L+ G+ + G  + A   +G M   GC  +  +Y  L N
Sbjct: 1022 MYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPN 1078



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 3/342 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+ G     D  E   +F  M  Q V+ +V TF  I   L     +  A   L +M + G
Sbjct: 99  LMRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 155

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +  NA TYN L+      G    A E++  M   G      +Y++L+  + K ++VE  L
Sbjct: 156 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L REM + G+KP V +Y      L +  + + A ++  +M+ +G   D  T+T  I  L
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C  G I +A ++F  ++    + D   Y  L+D    +G  +   E++ ++       NV
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V Y  +I  LC  G++ +A ++F +M++    P+  +++ LI GF++ +      EL   
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           M      P+     + ++   K+  S+K++  + + + +G V
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 437



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 36/346 (10%)

Query: 248 LIHGLCHANDWNEA-KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +IH L  A+   EA +R         V  +  + N +++ +  + ++ + + + D+M ++
Sbjct: 60  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 119

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            V+ N  T+  +  G  + G +  A      M+  G   +  +YN L+    K+    EA
Sbjct: 120 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 179

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
           L +YR M+  G+ P+V TY+ L +   +   VE  L L  EM+  GV  +  +YT     
Sbjct: 180 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT----- 234

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           +C              +R+L                 ++ R   A+ +   + +    P+
Sbjct: 235 IC--------------IRVLG----------------QAKRFDEAYRILAKMENEGCKPD 264

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V+T+ ++IQ LC+ G++  A+D+F  M+++   PD +T+  L+  F    +   V E+ +
Sbjct: 265 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 324

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            MK      +    + V+D L +     ++L  F   +++G V E 
Sbjct: 325 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQ 370



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 6/197 (3%)

Query: 91   GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
            G   N   YNIL+N     G        F  ++     P+  ++  +I  L    ++ + 
Sbjct: 890  GCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDG 949

Query: 151  AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
               F +L   G EP++ITYN LI+GL ++     A++LF EM     + G+V  PN  TY
Sbjct: 950  LTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ----KKGIV--PNLYTY 1003

Query: 211  STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
            +++I  L K G   +A  ++ ++  +   P+V TYN+LI G   +   + A   +  M+ 
Sbjct: 1004 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIV 1063

Query: 271  QGVQPSVVTFNVIMDEL 287
             G  P+  T+  + ++L
Sbjct: 1064 GGCLPNSSTYMQLPNQL 1080



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 7/135 (5%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
            N+    F  +L M   P  ++ +N+L+  L K+K  +        +   G+ PNLYTYN 
Sbjct: 947  NDGLTYFRQLLEMGLEPDLIT-YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1005

Query: 102  LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            LI    K G+ +     +  +L   + PN  T+N+LI+G         A A + ++   G
Sbjct: 1006 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1065

Query: 162  CEPNVITYNTLINGL 176
            C PN  TY  L N L
Sbjct: 1066 CLPNSSTYMQLPNQL 1080


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 217/415 (52%), Gaps = 6/415 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            F ++     E  V +   +++GLC+ G   +   L +E+A      GV  K N VTY+ 
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK----GV--KANVVTYNA 265

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            I+G  K   +     +   M+ E +  +VVTY  LIHG  +     EA+RLF EM ++G
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           ++  V  +  I+   C++  +  A  L D M  +G+ P+A TY  L+ G C  G++  A+
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   M+  G   + V +N LI+GYC++  V+EAL L   M  KG++  V  YN++  GL
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            ++++ + A  L   M   GV+ +T ++TT ID  CK G  +EA  +FR +       +I
Sbjct: 446 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 505

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LIDG  K G +K A +L   L +  L+P+V T   +I G C DG++D A  LF +
Sbjct: 506 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 565

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           M +    P+V+T+  +I G  +     +  +L  +MKE  + PD ++ S +V  L
Sbjct: 566 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 205/376 (54%), Gaps = 10/376 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIA--FGRILRSCFTPNAATFNSLIKGLHAESR 146
           A G+  N+ TYN  I  + K  R+ LG +A     + +     N  T+  LI G     +
Sbjct: 253 AKGVKANVVTYNAFIEGYFK--RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGK 310

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I EA  LF +++  G E +V  Y ++I+  CR+G+   AL LF+EM +     G++  P+
Sbjct: 311 IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK----GLI--PS 364

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY  +I G+CK G ++ A+ L  +M+ + I+ + V +N+LI G C +   +EA RL +
Sbjct: 365 AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQV 424

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M  +G++  V  +N I   LCK  + DEA  LL  MV+RGV PN  ++ TL+D +C  G
Sbjct: 425 VMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 484

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
               A+ +F  ME  G   + ++YN+LI+GY K   ++EA  L  E+ ++G+ P V T  
Sbjct: 485 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 544

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L  G     +V+ ALKLFDEM + G+  +  TYT  I GL K+G   EA +L+  ++  
Sbjct: 545 SLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET 604

Query: 447 KCELDIQAYNCLIDGL 462
               D   Y+ L+  L
Sbjct: 605 GLTPDDTVYSSLVGSL 620



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 179/341 (52%)

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            L + G VD     F +M + ++   V +   ++ GLC   D    ++L  E+  +GV+ 
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VVT+N  ++   K   +   + +L LM + GV  N  TY  L+ GF  +GKI  A+ LF
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M   G + D   Y  +I+  C++  V+ AL L+ EM  KG+ P+  TY  L  G+ + 
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EA+ L   +     E D+ AY
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +  GLCK  R   A  L  S+    + PN +++  +I   C +G   +A+ +F +MEE
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               P++IT+++LI G+ +     + ++L  +++ + ++PD
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 539



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 152/303 (50%)

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           R F  M++  V+ +V +  +++D LCK   ++   +L+D +  +GV+ N  TYN  ++G+
Sbjct: 211 RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY 270

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
                +    E+   ME  G   + V+Y +LI+G+    ++EEA  L+ EM  KGI+  V
Sbjct: 271 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 330

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
             Y ++         V+ AL LFDEM   G+     TY   I G+CK G +  A  L   
Sbjct: 331 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 390

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           ++    +L+   +N LIDG C+SG +  A  L   +    L  +V  YN +  GLC   +
Sbjct: 391 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 450

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            D+A+ L   M E   +P+ ++F  LI  + +     +   +  +M+EK  +P+    ++
Sbjct: 451 KDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNV 510

Query: 563 VVD 565
           ++D
Sbjct: 511 LID 513



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 151/332 (45%)

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           + EA   F  M  +G      +  V +  L +  ++D   R    MV   V     +   
Sbjct: 171 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           ++DG C  G +    +L   + + G K + V+YN  I GY K  ++     +   M  +G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           +   VVTY  L  G   I ++E A +LF+EM+  G+ AD   YT+ I   C++G +  A+
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            LF  +           Y  LI G+CK+G+++ A  L   +    +  N V +N +I G 
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G +D+A  L + ME+     DV  ++ +  G  ++N   +   LL  M E+ V P+ 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 558 SIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
              + ++D+  K    +++   F   E +G V
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 502


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 195/398 (48%), Gaps = 41/398 (10%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L P  YTY IL++C  +  R  L    FG++LR+    +A   + L+KG     R  EA 
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132

Query: 152 -ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L  +    GC P+V +YN L+  LC  G +  A NL   MA G    G VC P+ V Y
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEG----GTVCSPDVVAY 188

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA--------------- 255
           +T+IDG  KEG V+KA  LF +M    I PD+VTYNS++H LC A               
Sbjct: 189 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 248

Query: 256 --------------------NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
                                 W EA R+F EM    + P VVT +++M  LCK  K+ E
Sbjct: 249 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 308

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A  + D M  +G  P+  +YN +++G+   G +    +LF  M   G   D  ++N+ I 
Sbjct: 309 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIK 368

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
            Y     +++A+ ++ EM   G+KP VVTY T+   L  I +++ A++ F++M   GVA 
Sbjct: 369 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 428

Query: 416 DTRTYTTFIDGLCKNGYIIEAVEL-FRTLRILKCELDI 452
           D   Y   I G C +G +++   + F    I+   LDI
Sbjct: 429 DKYAYNCLIQGFCTHGILLKTQGIDFGNNEIMALHLDI 466



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 204/403 (50%), Gaps = 5/403 (1%)

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C +G  + A+ LF   A+   +   V  P + TY+ ++D   +    + A A F Q+   
Sbjct: 49  CGSGPAL-AVALFNRAAS-RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRT 106

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDE 295
            +  D +  + L+ G C A   +EA  + +    + G  P V ++N+++  LC   K  +
Sbjct: 107 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 166

Query: 296 ASRLLDLMVQRGV--RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           A  LL +M + G    P+   YNT++DGF   G +N+A +LF  M   G   D V+YN +
Sbjct: 167 ADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 226

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ++  CK + +++A +  R+MV+K + P   TYN L  G     Q + A+++F EM+R  +
Sbjct: 227 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 286

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D  T +  +  LCK G I EA ++F T+ +     D+ +YN +++G    G L    +
Sbjct: 287 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 346

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           LF  +    + P+  T+N+ I+   N G +DKA  +F +M ++   PDV+T+  +I    
Sbjct: 347 LFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 406

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKS 576
           RI +     E  ++M ++ V PD    + ++     + I LK+
Sbjct: 407 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKT 449



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 154/312 (49%), Gaps = 14/312 (4%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVS-----LGFIAFGRILRSCFTPNAATFNSLIKG 140
           R    G  P++++YNIL+   C  G+       L  +A G  + S   P+   +N++I G
Sbjct: 138 RTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCS---PDVVAYNTVIDG 194

Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIG 200
              E  + +A  LF ++   G  P+++TYN++++ LC+      A     +M N      
Sbjct: 195 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR---- 250

Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
               PN  TY+ +I G    G   +A  +F +M+  +I PDVVT + L+  LC      E
Sbjct: 251 --VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 308

Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
           A+ +F  M  +G  P V ++N++++       + + + L DLM+  G+ P+  T+N  + 
Sbjct: 309 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIK 368

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
            +   G +++A  +F  M   G K D V+Y  +I   C+  ++++A+  + +M+ +G+ P
Sbjct: 369 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 428

Query: 381 TVVTYNTLFLGL 392
               YN L  G 
Sbjct: 429 DKYAYNCLIQGF 440



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 152/308 (49%), Gaps = 19/308 (6%)

Query: 55  DYMLRMHPS-----PPPVSSFNILLASLAK----NKHYD--TRLNATGLFPNLYTYNILI 103
           D +LRM         P V ++N ++    K    NK  D    +   G+ P+L TYN ++
Sbjct: 168 DNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVV 227

Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
           +  CK   +        +++     PN  T+N+LI G  +  +  EA  +F +++     
Sbjct: 228 HALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSIL 287

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P+V+T + L+  LC+ G    A ++F+ MA   G+      P+  +Y+ +++G   +G +
Sbjct: 288 PDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVFSYNIMLNGYATKGCL 341

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
                LF  M  + I PD  T+N  I    +    ++A  +F EM D GV+P VVT+  +
Sbjct: 342 VDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 401

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL-FGSMESMG 342
           +  LC+  KMD+A    + M+ +GV P+   YN L+ GFC  G + + + + FG+ E M 
Sbjct: 402 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGIDFGNNEIMA 461

Query: 343 CKHDDVSY 350
             H D+ +
Sbjct: 462 L-HLDIGF 468


>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 229/446 (51%), Gaps = 17/446 (3%)

Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           SC T +A T   L+  L  + +  EA A+F  L   G +P +ITY TL+  L R      
Sbjct: 56  SCQTVHART--KLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKS 113

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
              L  ++A+ NG      KP+++  + +I+     G VD+A  +F +MK+    P   T
Sbjct: 114 IPALLSKVAD-NG-----MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTST 167

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMM--DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           YN+LI G        E+ +L +EMM  D+ V+P+  T+N+++   C  +K++EA  +L  
Sbjct: 168 YNTLIKGFGIVGRPYESMKL-LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHK 226

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           MV  G++P+  TYNT+   +   G+  +AE L   M+    K ++ +  I+I+GYCK   
Sbjct: 227 MVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGN 286

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLF---EIHQVEHALKLFDEMQRDGVAADTRT 419
           + EAL     M   G+ P  V +N+L  G     + + V+ AL L +E    G+  D  T
Sbjct: 287 MTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEF---GIKPDVVT 343

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           ++T ++     G +    E+F  +     E DI AY+ L  G  ++G+ + A  L  S+ 
Sbjct: 344 FSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMS 403

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
              +  NVV +  +I G C  G+MD+A  L   M E   +P++ T++ LI G+    +P 
Sbjct: 404 KYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPW 463

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVD 565
           K  E+L  M+E+ V+P+ S + +V D
Sbjct: 464 KAEEILSTMEERGVVPEMSTMQLVAD 489



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 227/497 (45%), Gaps = 28/497 (5%)

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           L+N     G+       F  +      P   T+ +L+  L  + R     AL +K+   G
Sbjct: 66  LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+ I  N +IN    +G    A+ +F++M     E G  CKP T TY+T+I G    G
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMK----EYG--CKPTTSTYNTLIKGFGIVG 179

Query: 222 F-VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
              +  K L +  +DEN+ P+  TYN LI   C      EA  +  +M+  G+QP VVT+
Sbjct: 180 RPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTY 239

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
           N +     +N + ++A RL+  M    V+PN  T   ++ G+C  G +  A      M+ 
Sbjct: 240 NTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKE 299

Query: 341 MGCKHDDVSYNILINGYCKNKE---VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           +G   + V +N LI GY    +   V+EAL+L  E    GIKP VVT++T+         
Sbjct: 300 LGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGL 356

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
           +++  ++F++M + G+  D   Y+    G  + G   +A  L  ++     + ++  +  
Sbjct: 357 MDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTT 416

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +I G C +G++  A+ L   +      PN+ TY  +I G     Q  KA ++   MEE  
Sbjct: 417 IISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERG 476

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK---------VMPDASIVSIVVDLLV 568
             P++ T  ++   +  I    + N +L+  +E+           MP  S+ SI      
Sbjct: 477 VVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDSDKMPVQSLESIY----- 531

Query: 569 KNEISLKSLPSFLVQER 585
             +  L + PS L+Q R
Sbjct: 532 -KKQKLSASPSNLLQIR 547



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 192/431 (44%), Gaps = 5/431 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L   G  P L TY  L+    +  R         ++  +   P++   N++I       +
Sbjct: 86  LTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGK 145

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           + EA  +F K+K +GC+P   TYNTLI G    G    ++ L E M           KPN
Sbjct: 146 VDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDEN-----VKPN 200

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY+ +I   C +  +++A  +  +M    I PDVVTYN++        +  +A+RL +
Sbjct: 201 DRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLIL 260

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M    V+P+  T  +I+   CK   M EA R L  M + GV PN   +N+L+ G+    
Sbjct: 261 KMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDAT 320

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
             N  +E    ME  G K D V+++ ++N +     ++    ++ +MV  GI+P +  Y+
Sbjct: 321 DTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYS 380

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G     Q   A  L   M + GV  +   +TT I G C  G +  A  L   +  +
Sbjct: 381 ILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEM 440

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               +++ Y  LI G  ++ +   A E+  ++    +VP + T  ++       G   +A
Sbjct: 441 GTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEA 500

Query: 507 RDLFLDMEENA 517
             +    EE +
Sbjct: 501 NRILNGSEEES 511


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 222/437 (50%), Gaps = 7/437 (1%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
             P + TFN+L+  L   +   +A  +F + K    + +V ++  +I G C  G+     
Sbjct: 113 LVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGF 171

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            +  +M     E+G+   PN V Y+T+IDG CK G +++ K LF +M + ++  +  TY 
Sbjct: 172 EVLGQME----EMGL--SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 225

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
            LI+G        +   L+ +M   G+ P+V T+N ++   C + K++ A  L D M +R
Sbjct: 226 VLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRER 285

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           GV  N  TYNTL+ G C   ++  AE L   M+  G   + +SYN LI+GYC    +++A
Sbjct: 286 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 345

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
            SL+ +M S G  P++ TYN L  G  E         +  EM+  G++    TYT  +D 
Sbjct: 346 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 405

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           L ++  I +A +++ ++       DI  Y  LI GLC  G +K A +LF SL    L PN
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPN 465

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
            V YN MI G C +G   +A  L  +M EN   P+V +++  I    +  + ++   LL 
Sbjct: 466 DVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLK 525

Query: 547 KMKEKKVMPDASIVSIV 563
            M E  + P  SI +++
Sbjct: 526 DMIELGLKPSISIWNMI 542



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 198/398 (49%), Gaps = 12/398 (3%)

Query: 67  VSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V SF I++    +  + D       ++   GL PN+  Y  LI+  CK G +  G   F 
Sbjct: 151 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 210

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
           ++       N  T+  LI G        +   L+ K+K  G  PNV TYN++I   C  G
Sbjct: 211 KMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDG 270

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               A  LF+EM     E GV C  N VTY+T+I GLC+E  V +A+ L  +MK + ++P
Sbjct: 271 KLNNAFELFDEMR----ERGVAC--NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSP 324

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           ++++YN+LI G C   + ++A  LF +M   G  PS+ T+N+++    + +     + ++
Sbjct: 325 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV 384

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M  RG+ P+  TY  LMD       I +A +++ SME  G   D   Y +LI+G C  
Sbjct: 385 REMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVV 444

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            +++EA  L++ +    +KP  V YNT+  G  +      AL+L  EM  +G+  +  +Y
Sbjct: 445 GDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASY 504

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
            + I  LCK+    EA  L + +  L  +  I  +N +
Sbjct: 505 NSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 213/469 (45%), Gaps = 46/469 (9%)

Query: 65  PPVSSFNILLASLAKNKHYDTR---LNAT--GLFPNLYTYNILINCFCKIGRVSLGFIAF 119
           P  ++FN LL  L K+  ++      N T   +  ++Y++ I+I   C++G +  GF   
Sbjct: 115 PGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVL 174

Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
           G++     +PN   + +LI G      I     LF K+       N  TY  LING  + 
Sbjct: 175 GQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKM 234

Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
           G     + L+E+M       G+V  PN  TY+++I   C +G ++ A  LF +M++  + 
Sbjct: 235 GLKKDGIELYEKMK----LTGIV--PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVA 288

Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
            +VVTYN+LI GLC      EA+RL   M   G+ P+++++N ++D  C    +D+AS L
Sbjct: 289 CNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSL 348

Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
            + M   G  P+  TYN L+ GF          ++   ME+ G     V+Y IL++   +
Sbjct: 349 FNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVR 408

Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
           +  +E+A  +Y  M   G+   +  Y  L  GL  +  ++ A KLF  +    +  +   
Sbjct: 409 SDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVI 468

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
           Y T I G CK G        +R LR+LK                              + 
Sbjct: 469 YNTMIYGYCKEG------SSYRALRLLK-----------------------------EMG 493

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
              +VPNV +YN  I  LC D +  +A  L  DM E    P +  ++M+
Sbjct: 494 ENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 214/444 (48%), Gaps = 8/444 (1%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALF-TKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P     +  I   H  S++ E A  +  ++   G  P   T+N L+  L ++     A  
Sbjct: 79  PTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWR 138

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           +F E   GN       K +  ++  +I G C+ G++DK   +  QM++  ++P+VV Y +
Sbjct: 139 VFNE-TKGN------VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 191

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI G C   D    K+LF +M +  V  +  T+ V+++   K     +   L + M   G
Sbjct: 192 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 251

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           + PN  TYN+++   C  GK+N A ELF  M   G   + V+YN LI G C+ + V EA 
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 311

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L   M   G+ P +++YNTL  G   I  ++ A  LF++M+  G +    TY   I G 
Sbjct: 312 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 371

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
            +        ++ R +           Y  L+D L +S  ++ A++++ S+    LV ++
Sbjct: 372 SEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADI 431

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
             Y ++I GLC  G M +A  LF  ++E    P+ + ++ +I+G+ +     +   LL +
Sbjct: 432 YIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKE 491

Query: 548 MKEKKVMPDASIVSIVVDLLVKNE 571
           M E  ++P+ +  +  + +L K+E
Sbjct: 492 MGENGMVPNVASYNSTIXILCKDE 515



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 173/325 (53%), Gaps = 1/325 (0%)

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ +G+ P   TFN ++  L K+   ++A R+ +   +  V+ +  ++  ++ G C +G
Sbjct: 107 QMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN-ETKGNVKLDVYSFGIMIKGCCEVG 165

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            +++  E+ G ME MG   + V Y  LI+G CKN ++E    L+ +M    +     TY 
Sbjct: 166 YLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYT 225

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            L  G F++   +  ++L+++M+  G+  +  TY + I   C +G +  A ELF  +R  
Sbjct: 226 VLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRER 285

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
               ++  YN LI GLC+  R+  A  L C +    L PN+++YN +I G C+ G +DKA
Sbjct: 286 GVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKA 345

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             LF  M+ +  +P + T+++LI GF      + V +++ +M+ + + P     +I++D 
Sbjct: 346 SSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDA 405

Query: 567 LVKNEISLKSLPSFLVQERQGEVGE 591
           LV+++   K+   +   E+ G V +
Sbjct: 406 LVRSDNIEKAFQIYSSMEKAGLVAD 430



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 198/413 (47%), Gaps = 7/413 (1%)

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V+ +  +IN   R+     AL    +M      IG    P + T++ ++  L K  F +
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQM------IGRGLVPGSNTFNNLLILLIKSNFFE 134

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           KA  +F + K  N+  DV ++  +I G C     ++   +  +M + G+ P+VV +  ++
Sbjct: 135 KAWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 193

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
           D  CKN  ++   +L   M +  V  N  TY  L++GF  MG      EL+  M+  G  
Sbjct: 194 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIV 253

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +  +YN +I   C + ++  A  L+ EM  +G+   VVTYNTL  GL +  +V  A +L
Sbjct: 254 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 313

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
              M+RDG++ +  +Y T IDG C  G + +A  LF  ++       +  YN LI G  +
Sbjct: 314 MCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSE 373

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
           +       ++   +    L P+ VTY I++  L     ++KA  ++  ME+     D+  
Sbjct: 374 AKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI 433

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
           + +LIHG   + +  + ++L   + E  + P+  I + ++    K   S ++L
Sbjct: 434 YGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRAL 486



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 161/309 (52%), Gaps = 6/309 (1%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           ++  TG+ PN+YTYN +I   C  G+++  F  F  +       N  T+N+LI GL  E 
Sbjct: 246 KMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQER 305

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R++EA  L  ++K  G  PN+I+YNTLI+G C  G+   A +LF +M + +G+      P
Sbjct: 306 RVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS-SGQ-----SP 359

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +  TY+ +I G  +         +  +M+   ++P  VTY  L+  L  +++  +A +++
Sbjct: 360 SLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 419

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             M   G+   +  + V++  LC    M EAS+L   + +  ++PN   YNT++ G+C  
Sbjct: 420 SSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKE 479

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G   RA  L   M   G   +  SYN  I   CK+++  EA  L ++M+  G+KP++  +
Sbjct: 480 GSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIW 539

Query: 386 NTLFLGLFE 394
           N +    F+
Sbjct: 540 NMISKARFD 548


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 234/485 (48%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN L+    K G        +  ++     P+  T++ L+        
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +     L  +++A G +PNV +Y   I  L +      A  +  +M N        CKP+
Sbjct: 246 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPD 299

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T++ +I  LC  G +  AK +F +MK  +  PD VTY +L+       D      ++ 
Sbjct: 300 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 359

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G   +VV +  ++D LC+  ++ EA  + D M Q+G+ P   +YN+L+ GF    
Sbjct: 360 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 419

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +   A ELF  M+  G K +  ++ + IN Y K+ E  +A+  Y  M SKGI P VV  N
Sbjct: 420 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 479

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL +  ++  A ++F E++  GV+ DT TYT  I    K     EAV++F  +   
Sbjct: 480 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 539

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  D+ A N LID L K+GR   AW +F  L    L P   TYN ++ GL  +G++ + 
Sbjct: 540 NCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 599

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M  +   P++IT++ ++    +    +   ++L+ M  K  +PD S  + V+  
Sbjct: 600 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 659

Query: 567 LVKNE 571
           LVK E
Sbjct: 660 LVKEE 664



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 153/508 (30%), Positives = 242/508 (47%), Gaps = 14/508 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N +L  LAK+      K     L A G+ P+  TY ++I C  K  +       
Sbjct: 473 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 532

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ +   P+    NSLI  L+   R  EA  +F +LK    EP   TYNTL+ GL R
Sbjct: 533 FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 592

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     ++L EEM + N        PN +TY+TI+D LCK G V+ A  +   M  +  
Sbjct: 593 EGKVKEVMHLLEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 646

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+ +YN++I+GL     +NEA  +F +M  + + P   T   I+    K   M EA  
Sbjct: 647 IPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALH 705

Query: 299 LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           ++ D  +Q G + +  + ++LM+G      I ++ E    + S G   DD     LI   
Sbjct: 706 IIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 765

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK K+  EA  L ++  S G+      YN+L  GL + + ++ A  LF EM+  G   D 
Sbjct: 766 CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 825

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   +D + K+  I E +++   +     E     YN +I GL KS RL+ A +L+ +
Sbjct: 826 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 885

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L      P   TY  ++ GL   G+++ A +LF +M E     +   +++L++G      
Sbjct: 886 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 945

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVD 565
             KV  L   M ++ + PD    +I++D
Sbjct: 946 TEKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 214/446 (47%), Gaps = 6/446 (1%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           GRV      F  + R     N  TF ++  GL  E  +  A      +K  G   N  TY
Sbjct: 139 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 198

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N L+  L ++G    AL ++  M       GVV  P+  TYS ++    K   V+    L
Sbjct: 199 NGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWL 252

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+   + P+V +Y   I  L  A  ++EA R+  +M ++G +P V+T  V++  LC 
Sbjct: 253 LREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD 312

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             ++ +A  +   M +   +P+  TY TL+D F   G      E++ +M++ G   + V+
Sbjct: 313 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 372

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  +I+  C+   V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  M 
Sbjct: 373 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 432

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   +  T+  FI+   K+G  I+A++ +  ++      D+ A N ++ GL KSGRL 
Sbjct: 433 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 492

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  +F  L    + P+ +TY +MI+      + D+A  +F DM EN   PDV+  + LI
Sbjct: 493 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 552

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMP 555
               +     +   + +++KE  + P
Sbjct: 553 DTLYKAGRGDEAWRIFYQLKEMNLEP 578



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 227/494 (45%), Gaps = 34/494 (6%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A G   N+  Y  +I+  C++GRV      F  + +    P   ++NSLI G     R
Sbjct: 361 MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR 420

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN---------GN- 196
             +A  LF  +   G +PN  T+   IN   ++G ++ A+  +E M +         GN 
Sbjct: 421 FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA 480

Query: 197 --------GEIGVVCK-----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
                   G +G+  +           P+T+TY+ +I    K    D+A  +F  M + N
Sbjct: 481 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 540

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
             PDV+  NSLI  L  A   +EA R+F ++ +  ++P+  T+N ++  L +  K+ E  
Sbjct: 541 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 600

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            LL+ M      PN  TYNT++D  C  G +N A ++  SM + GC  D  SYN +I G 
Sbjct: 601 HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL 660

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF-DEMQRDGVAAD 416
            K +   EA S++ +M  K + P   T  T+     +I  ++ AL +  D   + G   D
Sbjct: 661 VKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTD 719

Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC 476
             +  + ++G+ K   I +++E    +      LD      LI  LCK  +   A EL  
Sbjct: 720 RSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVK 779

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF---I 533
                 +      YN +I GL ++  +D A  LF +M+E    PD  T+++L+      +
Sbjct: 780 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSM 839

Query: 534 RINEPSKVNELLHK 547
           RI E  KV E +H+
Sbjct: 840 RIEEMLKVQEEMHR 853



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 216/464 (46%), Gaps = 17/464 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           +  H   P V S+ I +  L + K +D       ++   G  P++ T+ +LI   C  GR
Sbjct: 256 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 315

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +S     F ++ +S   P+  T+ +L+              ++  +KA G   NV+ Y  
Sbjct: 316 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 375

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I+ LC+ G    AL +F+EM     + G+V  P   +Y+++I G  K      A  LF 
Sbjct: 376 VIDALCQVGRVFEALEMFDEMK----QKGIV--PEQYSYNSLISGFLKADRFGDALELFK 429

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M      P+  T+   I+    + +  +A + +  M  +G+ P VV  N ++  L K+ 
Sbjct: 430 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 489

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++  A R+   +   GV P+  TY  ++       K + A ++F  M    C  D ++ N
Sbjct: 490 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 549

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+   K    +EA  ++ ++    ++PT  TYNTL  GL    +V+  + L +EM   
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 609

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
               +  TY T +D LCKNG + +A+++  ++    C  D+ +YN +I GL K  R   A
Sbjct: 610 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 669

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA----RDLFL 511
           + +FC +   VL+P+  T   ++      G M +A    +D FL
Sbjct: 670 FSIFCQMKK-VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 712



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 198/438 (45%), Gaps = 46/438 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIG-----------VVCKPNTVTYSTIIDGLCKEGFVDKA 226
           R  HT  + N   E+  G+G +G            + K N  T++ I  GL  EG +  A
Sbjct: 120 RVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSA 179

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 MK+  I  +  TYN L++ L  +    EA  ++  MM  GV PSV T++V+M  
Sbjct: 180 PVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVA 239

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K R ++    LL  M   GV+PN  +Y   +       + + A  +   ME+ GCK D
Sbjct: 240 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 299

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            +++ +LI   C    + +A  ++ +M     KP  VTY TL     +    +  +++++
Sbjct: 300 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 359

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M+ DG   +   YT  ID LC+ G + EA+E+F  ++      +  +YN LI G  K+ 
Sbjct: 360 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 419

Query: 467 RLKFAWELFCSL------PHGV-----------------------------LVPNVVTYN 491
           R   A ELF  +      P+G                              +VP+VV  N
Sbjct: 420 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 479

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++ GL   G++  A+ +F +++    +PD IT+ M+I    + ++  +  ++ + M E 
Sbjct: 480 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 539

Query: 552 KVMPDASIVSIVVDLLVK 569
             +PD   V+ ++D L K
Sbjct: 540 NCVPDVLAVNSLIDTLYK 557



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 3/342 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+ G     D  E   +F  M  Q V+ +V TF  I   L     +  A   L +M + G
Sbjct: 134 LMRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 190

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +  NA TYN L+      G    A E++  M   G      +Y++L+  + K ++VE  L
Sbjct: 191 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L REM + G+KP V +Y      L +  + + A ++  +M+ +G   D  T+T  I  L
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C  G I +A ++F  ++    + D   Y  L+D    +G  +   E++ ++       NV
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V Y  +I  LC  G++ +A ++F +M++    P+  +++ LI GF++ +      EL   
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           M      P+     + ++   K+  S+K++  + + + +G V
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 472



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/346 (21%), Positives = 146/346 (42%), Gaps = 36/346 (10%)

Query: 248 LIHGLCHANDWNEA-KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +IH L  A+   EA +R         V  +  + N +++ +  + ++ + + + D+M ++
Sbjct: 95  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 154

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            V+ N  T+  +  G  + G +  A      M+  G         I++N Y         
Sbjct: 155 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG---------IVLNAY--------- 196

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
                            TYN L   L +      AL+++  M  DGV    RTY+  +  
Sbjct: 197 -----------------TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVA 239

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
             K   +   + L R +     + ++ +Y   I  L ++ R   A+ +   + +    P+
Sbjct: 240 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 299

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V+T+ ++IQ LC+ G++  A+D+F  M+++   PD +T+  L+  F    +   V E+ +
Sbjct: 300 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 359

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            MK      +    + V+D L +     ++L  F   +++G V E 
Sbjct: 360 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQ 405


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 188/344 (54%), Gaps = 6/344 (1%)

Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
           I  N  ++ L R G         E M    G+I     P+ +  +++I G CK G   KA
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVY-RGDI-----PDIIPCTSLIRGFCKIGKTRKA 138

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             +   ++D    PDV+TYN LI G+C    W +A++L  +M+ +G  PSVVTFN++++ 
Sbjct: 139 TRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINF 198

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
           LC+   +  A  +L+ M + G  PN+ +YN L+ GFC   K+ RA E  G M S GC  D
Sbjct: 199 LCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPD 258

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+YN L+   CK+ +V+ A+ L  ++ SKG  P ++TYNT+  GL ++ + + A KL D
Sbjct: 259 IVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLD 318

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           EM+  G+  D  TY++ + GL + G + EA++ F  L +L  + +   YN ++ GLCK+ 
Sbjct: 319 EMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKAR 378

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
           +   A +    +      P   +Y I+I+GL  +G   +A +L 
Sbjct: 379 KTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 176/327 (53%), Gaps = 6/327 (1%)

Query: 91  GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
           G  P++     LI  FCKIG+          I  S   P+  T+N LI G+ +  R M+A
Sbjct: 114 GDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDA 173

Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
             L   +   GC P+V+T+N LIN LCR G    A+++ E+M          C PN+++Y
Sbjct: 174 EKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG------CTPNSLSY 227

Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
           + ++ G CKE  +++A     +M      PD+VTYN+L+  LC     + A  L  ++  
Sbjct: 228 NPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSS 287

Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
           +G  P ++T+N ++D L K  K D+A++LLD M  +G++P+  TY++L+ G    GK++ 
Sbjct: 288 KGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDE 347

Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
           A + F  +E +G K + ++YN ++ G CK ++ + A+     MV +G KPT  +Y  L  
Sbjct: 348 AIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIE 407

Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADT 417
           GL      + AL+L +E+   GV   +
Sbjct: 408 GLAYEGLAKEALELLNELCLRGVVKKS 434



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 218/456 (47%), Gaps = 29/456 (6%)

Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
           GF +F  + R     N  T +S   G+    R ++ + +F    A      + + + L N
Sbjct: 13  GFCSFQHLHRE----NTRT-SSAFAGVRVRVRKLKRSRIF----AVSFNGKLQSLDKLPN 63

Query: 175 GLCRTGHTMIA----LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF 230
           G    GH  ++    L  FEE+ + N                 +  L + G +++     
Sbjct: 64  GHLGNGHVSLSPIHSLTNFEEIESNNN----------------LSKLVRNGELEEGFRFL 107

Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
             M      PD++   SLI G C      +A R+   + D G  P V+T+NV++  +C  
Sbjct: 108 ESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCST 167

Query: 291 RKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSY 350
            +  +A +LL  MV+RG  P+  T+N L++  C  G + RA ++   M   GC  + +SY
Sbjct: 168 GRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSY 227

Query: 351 NILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR 410
           N L++G+CK K++E A+    +M S+G  P +VTYNTL   L +  +V+ A++L +++  
Sbjct: 228 NPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSS 287

Query: 411 DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKF 470
            G +    TY T IDGL K G   +A +L   +R    + DI  Y+ L+ GL + G++  
Sbjct: 288 KGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDE 347

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A + F  L    + PN +TYN ++ GLC   + D+A D    M +    P   ++ +LI 
Sbjct: 348 AIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIE 407

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           G        +  ELL+++  + V+  +S   + V +
Sbjct: 408 GLAYEGLAKEALELLNELCLRGVVKKSSAEKVAVRM 443



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 153/289 (52%), Gaps = 6/289 (2%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  P++ TYN+LI+  C  GR          ++R   +P+  TFN LI  L  +  +  
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  +  K+   GC PN ++YN L++G C+      A+    +M +        C P+ VT
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRG------CYPDIVT 261

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           Y+T++  LCK+G VD A  L  Q+  +  +P ++TYN++I GL      ++A +L  EM 
Sbjct: 262 YNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMR 321

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G++P ++T++ ++  L +  K+DEA +    +   GV+PNA TYN +M G C   K +
Sbjct: 322 AKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTD 381

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           RA +    M   GCK  + SY ILI G       +EAL L  E+  +G+
Sbjct: 382 RAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 151/280 (53%), Gaps = 12/280 (4%)

Query: 65  PPVSSFNILLASLAKNKHY--DTRLNA----TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N+L++ +     +    +L A     G  P++ T+NILIN  C+ G +      
Sbjct: 152 PDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDV 211

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++ +   TPN+ ++N L+ G   E ++  A     K+ + GC P+++TYNTL+  LC+
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ L  ++++        C P  +TY+T+IDGL K G  D+A  L  +M+ + +
Sbjct: 272 DGKVDAAVELLNQLSSKG------CSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGL 325

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD++TY+SL+ GL      +EA + F ++   GV+P+ +T+N IM  LCK RK D A  
Sbjct: 326 KPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAID 385

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
            L  MVQRG +P   +Y  L++G    G    A EL   +
Sbjct: 386 FLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 169/339 (49%)

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           N + +  N+ +  L    +  E  R    M+ +G  P ++    ++   CK  K  +A+R
Sbjct: 81  NFEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATR 140

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           +++++   G  P+  TYN L+ G C  G+   AE+L   M   GC    V++NILIN  C
Sbjct: 141 IMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLC 200

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   +  A+ +  +M   G  P  ++YN L  G  +  ++E A++   +M   G   D  
Sbjct: 201 RKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIV 260

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY T +  LCK+G +  AVEL   L    C   +  YN +IDGL K G+   A +L   +
Sbjct: 261 TYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
               L P+++TY+ ++ GL  +G++D+A   F D+E     P+ IT++ ++ G  +  + 
Sbjct: 321 RAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKT 380

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
            +  + L  M ++   P  +  +I+++ L    ++ ++L
Sbjct: 381 DRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 250/528 (47%), Gaps = 75/528 (14%)

Query: 47  PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL---------NATGLFPNLY 97
           P +A  +F  M         V SFN +L  + +   ++  L          +  + PN  
Sbjct: 112 PEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNAL 171

Query: 98  TYNILINCFCKIGRVSLGFIAFGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           T+N++I   C++G V      F  I LR+C  P+  T+++L+ GL  E RI EA +L  +
Sbjct: 172 TFNLVIKAMCRLGLVDKAIEVFREIPLRNC-APDNYTYSTLMHGLCKEERIDEAVSLLDE 230

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG 216
           ++  G  PN++ +N LI+ LC+ G    A  L + M          C PN VTY+ ++ G
Sbjct: 231 MQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKG------CVPNEVTYNALVHG 284

Query: 217 LCKEGFVDKAKALFLQMKDENINPDVVT-------------------------------- 244
           LC +G ++KA +L  QM      P+ VT                                
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344

Query: 245 ---YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
              Y+SLI GLC    +N+A  L+ EM+ +G  P+ + ++ ++D LC+  K+DEA   L 
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
            M  +G  PN+ TY++LM G+   G  ++A  ++  M +  C H++V Y+ILING CK+ 
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG 464

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRT 419
           +  EAL ++++M+S+GIK  VV Y+++  G    + VE  LKLF++M   G  V  D  T
Sbjct: 465 KFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVIT 524

Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDI-----------QAYNCLIDG------- 461
           Y   ++  C    I  A+++   +    C+ D            +  N   DG       
Sbjct: 525 YNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDEL 584

Query: 462 ---LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
              L K  R   A ++   + H  L+P   T+ +++Q +C    + KA
Sbjct: 585 VVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 241/473 (50%), Gaps = 17/473 (3%)

Query: 133 TFNSLIKGLHAESRIMEAAALFTKL---KAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           +FNS++  +  E     A   +  +   K+    PN +T+N +I  +CR G    A+ +F
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 190 EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLI 249
            E+   N      C P+  TYST++ GLCKE  +D+A +L  +M+ E   P++V +N LI
Sbjct: 194 REIPLRN------CAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLI 247

Query: 250 HGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
             LC   D   A +L   M  +G  P+ VT+N ++  LC   K+++A  LL+ MV     
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307

Query: 310 PNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSL 369
           PN  T+ TL++GF + G+ +    +  S+E+ G + ++  Y+ LI+G CK  +  +A+ L
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMEL 367

Query: 370 YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
           ++EMV KG  P  + Y+ L  GL    +++ A     EM+  G   ++ TY++ + G  +
Sbjct: 368 WKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFE 427

Query: 430 NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVT 489
            G   +A+ +++ +    C  +   Y+ LI+GLCK G+   A  ++  +    +  +VV 
Sbjct: 428 AGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVA 487

Query: 490 YNIMIQGLCNDGQMDKARDLFLDM--EENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           Y+ MI G CN   +++   LF  M  +     PDVIT+++L++ F       +  ++L+ 
Sbjct: 488 YSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNI 547

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ------ERQGEVGESNV 594
           M ++   PD     I +  L +N    +    FL +      +RQ  +G S +
Sbjct: 548 MLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKI 600


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 248/524 (47%), Gaps = 22/524 (4%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           +AF I   M+R     P  S++  ++  L + K  D        +   G+ P++YTY IL
Sbjct: 435 KAFQIVKEMMR-KGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTIL 493

Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
           I+ FCK G +      F  +  +  +PN  T+ +L+       ++ +A  +F ++    C
Sbjct: 494 IDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDAC 553

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGN----------GEIGVVCKPNTVTYST 212
            PN ITY+ LI+GLC+ G    A  ++ ++   +          G+      PN VTY  
Sbjct: 554 YPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGA 613

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
           +++GLCK   V  A  L   M      P+ + Y++L+ G C   + + A+ +F+ M   G
Sbjct: 614 LVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCG 673

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
             PSV T+  ++D + K+ ++D A ++L  M++    PN  TY  ++DG C  G+  +A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKAL 733

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   ME  GC  + V+Y  LI+G  K  +V+  L L+ +M +KG  P  VTY  L    
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
                ++ A  L DEM++       + Y T + G  K    + ++ L   +         
Sbjct: 794 CAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR--FLASLGLLEEMESHDTAPIA 851

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI---MIQGLCNDGQMDKARDL 509
             Y  LID   K+GRL+ A EL   +       N+ + ++   +IQ LC   Q+++A  L
Sbjct: 852 PVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVAL 911

Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           + +M      PD+  F  L+ G I  N+ ++  +L + + ++ V
Sbjct: 912 YSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 255/547 (46%), Gaps = 41/547 (7%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCF 106
           I + M+    +P P S FN L+ +    + Y        R+N  G  P    YNI I   
Sbjct: 328 IINMMMTEGCNPSP-SLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSI 386

Query: 107 CKIGR--------VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           C  GR        + L    +  +L +    N     +  + L    +  +A  +  ++ 
Sbjct: 387 C--GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMM 444

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P+  TY  +I  LC+      A  LF+EM     ++GV   P+  TY+ +ID  C
Sbjct: 445 RKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMK----KVGV--NPDVYTYTILIDSFC 498

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           K G +++A++ F +M+    +P+VVTY +L+H    +    +A  +F  M+     P+ +
Sbjct: 499 KAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAI 558

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRG----------------VRPNACTYNTLMDGF 322
           T++ ++D LCK  ++ +A  +   ++                   + PN  TY  L++G 
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   K++ A +L  +M + GC+ + + Y+ L++G+CK  E++ A  ++  M   G  P+V
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSV 678

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            TY +L   +F+  +++ A+K+  +M +D    +  TYT  +DGLCK G   +A+ L   
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSL 738

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +    C  ++  Y  LIDGL K+G++    ELF  +      PN VTY I+I   C  G 
Sbjct: 739 MEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGL 798

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           +D A  L  +M++      +  +   + GF +    S    LL +M+     P A +  +
Sbjct: 799 LDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASL--GLLEEMESHDTAPIAPVYGM 856

Query: 563 VVDLLVK 569
           ++D   K
Sbjct: 857 LIDSFSK 863



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 242/559 (43%), Gaps = 66/559 (11%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           RL   G  P+  TYN L+      G+V + F     +  S F  + +T  S  + L  E 
Sbjct: 194 RLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEG 253

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           R  +A  L  + + F  +  + T   +I+GL        A++    M   N  I     P
Sbjct: 254 RWGDALDLLER-EDFKLDTVLCT--QMISGLMEASLFNEAMSFLHRM-RCNSYI-----P 304

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           N VTY T++ G  K+  +   K +   M  E  NP    +NSL+H  C+A D+  A +LF
Sbjct: 305 NVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLF 364

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNR---------------------------------- 291
             M   G  P  V +N+ +  +C                                     
Sbjct: 365 NRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFA 424

Query: 292 -------KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
                  K ++A +++  M+++G  P+A TY  ++   C   ++++A  LF  M+ +G  
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            D  +Y ILI+ +CK   +E+A S + EM S G  P VVTY  L     +  Q+  A  +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD------------- 451
           F  M  D    +  TY+  IDGLCK G I +A E++  L      ++             
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604

Query: 452 ---IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
              +  Y  L++GLCK+ ++  A +L  ++      PN + Y+ ++ G C  G++D A++
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
           +FL M +    P V T+  LI    +        ++L +M +    P+    + +VD L 
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724

Query: 569 KNEISLKSLPSFLVQERQG 587
           K   + K+L    + E++G
Sbjct: 725 KTGETEKALNLLSLMEKKG 743



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 220/543 (40%), Gaps = 104/543 (19%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
            N L++    +    EA     +LK FG  P+ +TYN L+  L   G   +A  + +EM+
Sbjct: 172 LNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMS 231

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                    C   + T  +    LCKEG    A  L   ++ E+   D V    +I GL 
Sbjct: 232 ASG-----FCMDRS-TVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLM 282

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
            A+ +NEA      M      P+VVT+  ++    K +++    R++++M+  G  P+  
Sbjct: 283 EASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPS 342

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV---------- 363
            +N+L+  +C       A +LF  M + GC    V YNI I   C  +E+          
Sbjct: 343 LFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAE 402

Query: 364 -------------------------------EEALSLYREMVSKGIKPTVVTYNTLFLGL 392
                                          E+A  + +EM+ KG  P   TY  +   L
Sbjct: 403 KVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFL 462

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            +  +V+ A  LF EM++ GV  D  TYT  ID  CK G I +A   F  +R   C  ++
Sbjct: 463 CQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNV 522

Query: 453 -----------------QA------------------YNCLIDGLCKSGRLKFAWELFCS 477
                            QA                  Y+ LIDGLCK+G ++ A E++  
Sbjct: 523 VTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAK 582

Query: 478 L----------------PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
           L                    + PNVVTY  ++ GLC   ++  A DL   M      P+
Sbjct: 583 LIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPN 642

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN---EISLKSLP 578
            I +D L+ GF ++ E     E+  +M +   +P     + ++D + K+   ++++K L 
Sbjct: 643 QIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702

Query: 579 SFL 581
             L
Sbjct: 703 QML 705


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 217/415 (52%), Gaps = 6/415 (1%)

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
            F ++     E  V +   +++GLC+ G   +   L +E+A      GV  K N VTY+ 
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK----GV--KANVVTYNA 269

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
            I+G  K   +     +   M+ E +  +VVTY  LIHG  +     EA+RLF EM ++G
Sbjct: 270 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329

Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
           ++  V  +  I+   C++  +  A  L D M  +G+ P+A TY  L+ G C  G++  A+
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389

Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
            L   M+  G   + V +N LI+GYC++  V+EAL L   M  KG++  V  YN++  GL
Sbjct: 390 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449

Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
            ++++ + A  L   M   GV+ +T ++TT ID  CK G  +EA  +FR +       +I
Sbjct: 450 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 509

Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
             YN LIDG  K G +K A +L   L +  L+P+V T   +I G C DG++D A  LF +
Sbjct: 510 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 569

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
           M +    P+V+T+  +I G  +     +  +L  +MKE  + PD ++ S +V  L
Sbjct: 570 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 205/376 (54%), Gaps = 10/376 (2%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIA--FGRILRSCFTPNAATFNSLIKGLHAESR 146
           A G+  N+ TYN  I  + K  R+ LG +A     + +     N  T+  LI G     +
Sbjct: 257 AKGVKANVVTYNAFIEGYFK--RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGK 314

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I EA  LF +++  G E +V  Y ++I+  CR+G+   AL LF+EM +     G++  P+
Sbjct: 315 IEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK----GLI--PS 368

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             TY  +I G+CK G ++ A+ L  +M+ + I+ + V +N+LI G C +   +EA RL +
Sbjct: 369 AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQV 428

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M  +G++  V  +N I   LCK  + DEA  LL  MV+RGV PN  ++ TL+D +C  G
Sbjct: 429 VMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 488

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
               A+ +F  ME  G   + ++YN+LI+GY K   ++EA  L  E+ ++G+ P V T  
Sbjct: 489 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 548

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           +L  G     +V+ ALKLFDEM + G+  +  TYT  I GL K+G   EA +L+  ++  
Sbjct: 549 SLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET 608

Query: 447 KCELDIQAYNCLIDGL 462
               D   Y+ L+  L
Sbjct: 609 GLTPDDTVYSSLVGSL 624



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 230/493 (46%), Gaps = 18/493 (3%)

Query: 70  FNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           F++L    A NK +   L A       G   +  +  + +    + G+V      F R++
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT---G 180
                    +   ++ GL     +     L  ++ A G + NV+TYN  I G  +    G
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
                L L E+        GV C  N VTY+ +I G    G +++A+ LF +M+++ I  
Sbjct: 282 GVAEILTLMEKE-------GVAC--NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEA 332

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           DV  Y S+I   C + +   A  LF EM D+G+ PS  T+  ++  +CK  +M+ A  L+
Sbjct: 333 DVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLV 392

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           + M  +G+  N   +NTL+DG+C  G ++ A  L   ME  G + D  +YN + +G CK 
Sbjct: 393 NEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKL 452

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
              +EA  L   MV +G+ P  +++ TL     +      A ++F EM+  G   +  TY
Sbjct: 453 NRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 512

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              IDG  K G + EA +L   L       D+     LI G C  G++  A +LF  +P 
Sbjct: 513 NVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ 572

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             LVPNVVTY  MI GL  DG+ ++A  L+ +M+E    PD   +  L+      +E   
Sbjct: 573 RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESIS 632

Query: 541 VNELLHKMKEKKV 553
           +     ++K  KV
Sbjct: 633 MQIQGSQVKANKV 645



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 179/341 (52%)

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
            L + G VD     F +M + ++   V +   ++ GLC   D    ++L  E+  +GV+ 
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
           +VVT+N  ++   K   +   + +L LM + GV  N  TY  L+ GF  +GKI  A+ LF
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
             M   G + D   Y  +I+  C++  V+ AL L+ EM  KG+ P+  TY  L  G+ + 
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382

Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EA+ L   +     E D+ AY
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N +  GLCK  R   A  L  S+    + PN +++  +I   C +G   +A+ +F +MEE
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               P++IT+++LI G+ +     + ++L  +++ + ++PD
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 543



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 152/303 (50%)

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
           R F  M++  V+ +V +  +++D LCK   ++   +L+D +  +GV+ N  TYN  ++G+
Sbjct: 215 RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGY 274

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
                +    E+   ME  G   + V+Y +LI+G+    ++EEA  L+ EM  KGI+  V
Sbjct: 275 FKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADV 334

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
             Y ++         V+ AL LFDEM   G+     TY   I G+CK G +  A  L   
Sbjct: 335 YVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE 394

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           ++    +L+   +N LIDG C+SG +  A  L   +    L  +V  YN +  GLC   +
Sbjct: 395 MQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNR 454

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
            D+A+ L   M E   +P+ ++F  LI  + +     +   +  +M+EK  +P+    ++
Sbjct: 455 KDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNV 514

Query: 563 VVD 565
           ++D
Sbjct: 515 LID 517



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 151/332 (45%)

Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           + EA   F  M  +G      +  V +  L +  ++D   R    MV   V     +   
Sbjct: 175 FGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234

Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
           ++DG C  G +    +L   + + G K + V+YN  I GY K  ++     +   M  +G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
           +   VVTY  L  G   I ++E A +LF+EM+  G+ AD   YT+ I   C++G +  A+
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
            LF  +           Y  LI G+CK+G+++ A  L   +    +  N V +N +I G 
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           C  G +D+A  L + ME+     DV  ++ +  G  ++N   +   LL  M E+ V P+ 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 558 SIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
              + ++D+  K    +++   F   E +G V
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 506


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 232/485 (47%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN LI    K G        +  +      P   T++ L+        
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
                 L  +++A G  PNV +Y   I  L + G    A  +  +M          CKP+
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEG------CKPD 275

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VT + +I  LC  G +  AK +F +MK  +  PD VTY +L+     + D      ++ 
Sbjct: 276 VVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWN 335

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +   G   +VV++   +D LC+  ++DEA  + D M Q+G+ P   +YN+L+ GF    
Sbjct: 336 ALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKAD 395

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + NRA ELF  M   G   +  ++ + IN + K+ E  +AL  Y  M SKGI P VV  N
Sbjct: 396 RFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL +  ++  A ++F E++  G++ D  TYT  I    K     EA+++F  +   
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIEN 515

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           +C  D+ A N LID L K+GR   AW++F  L    L P   TYN ++ GL  +G++ + 
Sbjct: 516 RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEV 575

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L   M  N+  P++IT++ ++    +  E +   ++L+ M     MPD S  + V+  
Sbjct: 576 MQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYG 635

Query: 567 LVKNE 571
           LVK +
Sbjct: 636 LVKED 640



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 256/502 (50%), Gaps = 18/502 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++++L+ +  K +  +T       + A G+ PN+Y+Y I I    + GR+   +  
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI 263

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++      P+  T   LI+ L    R+ +A  +F K+KA   +P+ +TY TL++    
Sbjct: 264 LRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGD 323

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +G +     ++  + A+G  +       N V+Y+  +D LC+ G VD+A  +F +MK + 
Sbjct: 324 SGDSRSVSEIWNALKADGYND-------NVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P   +YNSLI G   A+ +N A  LF  M   G  P+  T  + ++   K+ +  +A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +  +LM  +G+ P+    N ++ G    G++  A+ +F  +++MG   D+++Y ++I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K    +EA+ ++ EM+     P V+  N+L   L++  +   A K+F E++   +    
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + GL + G + E ++L   +       +I  YN ++D LCK+G + +A ++  S
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P++ +YN ++ GL  + ++D+A  +F  M++   APD  T   ++  F+R   
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKK-VLAPDYATVCTILPSFVR--- 672

Query: 538 PSKVNELLHKMKEKKVMPDASI 559
              + E LH ++E  + PD+ +
Sbjct: 673 SGLMKEALHTVREYILQPDSKV 694



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 240/510 (47%), Gaps = 14/510 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N +L  LAK       K     L A G+ P+  TY ++I C  K          
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ +   P+    NSLI  L+   R  EA  +F +LK    EP   TYNTL+ GL R
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR 568

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     + L E M N N        PN +TY+T++D LCK G V+ A  +   M     
Sbjct: 569 EGKVKEVMQLLEGM-NSNS-----FPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGC 622

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA-S 297
            PD+ +YN++++GL   +  +EA  +F +M  + + P   T   I+    ++  M EA  
Sbjct: 623 MPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALH 681

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            + + ++Q   + +  + ++LM+G        ++ E   ++ S G   DD+  + +I   
Sbjct: 682 TVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHL 741

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+KE   A  L ++  + G+     +YN L  GL +   ++ A +LF EM+R G   D 
Sbjct: 742 CKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDE 801

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   +D + K+  I + +++   +     +     YN +I GL KS  L  A  L+  
Sbjct: 802 FTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L      P   TY  ++ GL  DG ++ A  LF +M E    P+   +++L++G+    +
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             KV EL   M E+ + PD    ++V+D L
Sbjct: 922 TEKVCELFESMVEQGMNPDIKSYTVVIDTL 951



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 251/548 (45%), Gaps = 40/548 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            NEA+ IF Y L+     P   ++N LLA L +             +N+    PN+ TYN 
Sbjct: 538  NEAWKIF-YELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNT 596

Query: 102  LINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +++C CK G V+    + +   +  C  P+ +++N+++ GL  E R+ EA  +F ++K  
Sbjct: 597  VLDCLCKNGEVNYALDMLYSMTMNGCM-PDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV 655

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEE---------------------MANGNGEI 199
               P+  T  T++    R+G    AL+   E                     +     E 
Sbjct: 656  -LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEK 714

Query: 200  GVVCKPNTVT---------YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
             +    N  +          S II  LCK      A  L  + ++  ++    +YN+LI 
Sbjct: 715  SIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774

Query: 251  GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            GL   +  + A+ LF EM   G  P   T+++I+D + K+ ++++  ++ + M  +G + 
Sbjct: 775  GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834

Query: 311  NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               TYNT++ G      ++ A  L+  + S G      +Y  L++G  K+  +E+A +L+
Sbjct: 835  TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALF 894

Query: 371  REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             EM+  G +P    YN L  G       E   +LF+ M   G+  D ++YT  ID LC +
Sbjct: 895  DEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954

Query: 431  GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            G + + +  F+ L  +  E D+  YN LI GL KSGRL+ A  L+  +    + PN+ TY
Sbjct: 955  GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014

Query: 491  NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            N +I  L   G+  +A  ++ ++      P+V T++ LI G+     P        +M  
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIV 1074

Query: 551  KKVMPDAS 558
                P++S
Sbjct: 1075 GGCRPNSS 1082



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 232/500 (46%), Gaps = 48/500 (9%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L A G   N+ +Y   ++  C++GRV      F  + +    P   ++NSLI G     R
Sbjct: 337 LKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADR 396

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              A  LF  +   G  PN  T+   IN   ++G ++ AL  +E M +     G+V  P+
Sbjct: 397 FNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSK----GIV--PD 450

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V  + ++ GL K G +  AK +F ++K   I+PD +TY  +I     A++ +EA ++F 
Sbjct: 451 VVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFA 510

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM++    P V+  N ++D L K  + +EA ++   + +  + P  CTYNTL+ G    G
Sbjct: 511 EMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREG 570

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K+    +L   M S     + ++YN +++  CKN EV  AL +   M   G  P + +YN
Sbjct: 571 KVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYN 630

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL +  +++ A  +F +M++  +A D  T  T +    ++G + EA+   R   IL
Sbjct: 631 TVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREY-IL 688

Query: 447 K--CELDIQAYNCLIDG-----------------------------------LCKSGRLK 469
           +   ++D  + + L++G                                   LCK     
Sbjct: 689 QPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEAL 748

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A EL     +  +     +YN +I GL ++  +D A +LF +M+     PD  T+ +++
Sbjct: 749 AAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLIL 808

Query: 530 HGF---IRINEPSKVNELLH 546
                 +RI +  K+ E +H
Sbjct: 809 DAMGKSMRIEDMLKIQEEMH 828



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 179/357 (50%), Gaps = 6/357 (1%)

Query: 134  FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
             + +I+ L      + A  L  K +  G      +YN LI GL       IA  LF EM 
Sbjct: 734  LSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMK 793

Query: 194  NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                   + C P+  TY  I+D + K   ++    +  +M ++      VTYN++I GL 
Sbjct: 794  R------LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847

Query: 254  HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             +   +EA  L+ ++M +G  P+  T+  ++D L K+  +++A  L D M++ G  PN  
Sbjct: 848  KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907

Query: 314  TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
             YN L++G+ + G   +  ELF SM   G   D  SY ++I+  C +  + + LS ++++
Sbjct: 908  IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 374  VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
               G++P ++TYN L  GL +  ++E AL L+++M++ G+A +  TY + I  L K G  
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 434  IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             EA +++  L     + ++  YN LI G   SG  + A+  +  +  G   PN  TY
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 227/504 (45%), Gaps = 49/504 (9%)

Query: 64   PPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFI 117
            PP + ++N +L  L KN   +  L+        G  P+L +YN ++    K  R+   F 
Sbjct: 588  PPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFW 647

Query: 118  AFGRILRSCFTPNAATFNSLIKG------------------LHAESRIMEAAA---LFTK 156
             F + ++    P+ AT  +++                    L  +S++  ++    +   
Sbjct: 648  MFCQ-MKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGI 706

Query: 157  LKAFGCEPNV---------------ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
            LK  G E ++               +  + +I  LC+    + A  L ++  N    +GV
Sbjct: 707  LKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFEN----LGV 762

Query: 202  VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              K  T +Y+ +I GL  E  +D A+ LF +MK    +PD  TY+ ++  +  +    + 
Sbjct: 763  SLK--TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820

Query: 262  KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             ++  EM ++G + + VT+N I+  L K++ +DEA  L   ++  G  P  CTY  L+DG
Sbjct: 821  LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880

Query: 322  FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
                G I  AE LF  M   GC+ +   YNIL+NGY    + E+   L+  MV +G+ P 
Sbjct: 881  LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 382  VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            + +Y  +   L    ++   L  F ++   G+  D  TY   I GL K+G + EA+ L+ 
Sbjct: 941  IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000

Query: 442  TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             +       ++  YN LI  L K+G+   A +++  L      PNV TYN +I+G    G
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060

Query: 502  QMDKARDLFLDMEENAAAPDVITF 525
              + A   +  M      P+  T+
Sbjct: 1061 SPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 193/438 (44%), Gaps = 46/438 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVC-----------KPNTVTYSTIIDGLCKEGFVDKA 226
           R  HT  + N   E+   +G +G V            K N  T+ T+   +  EG +  A
Sbjct: 96  RVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSA 155

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 MK+  I  +  TYN LI+ L  +    EA  ++  M   GV P+V T++V+M  
Sbjct: 156 PVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLA 215

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K R  +    LL  M  RGVRPN  +Y   +      G++  A  +   ME  GCK D
Sbjct: 216 FGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPD 275

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+  +LI   C    + +A  ++ +M +   KP  VTY TL     +        ++++
Sbjct: 276 VVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWN 335

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            ++ DG   +  +YT  +D LC+ G + EA+++F  ++         +YN LI G  K+ 
Sbjct: 336 ALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKAD 395

Query: 467 RLKFAWELFCSL------PHGV-----------------------------LVPNVVTYN 491
           R   A ELF  +      P+G                              +VP+VV  N
Sbjct: 396 RFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++ GL   G++  A+ +F +++    +PD IT+ M+I    + +   +  ++  +M E 
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIEN 515

Query: 552 KVMPDASIVSIVVDLLVK 569
           +  PD   ++ ++D+L K
Sbjct: 516 RCAPDVLAMNSLIDMLYK 533



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 156/309 (50%), Gaps = 13/309 (4%)

Query: 53   IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCF 106
            +F  M R+   P   + ++++L ++ K+   +  L      +  G      TYN +I+  
Sbjct: 788  LFSEMKRLGCDPDEFT-YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846

Query: 107  CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
             K   +      + +++   F+P   T+  L+ GL  +  I +A ALF ++   GCEPN 
Sbjct: 847  VKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNC 906

Query: 167  ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
              YN L+NG    G T     LFE M     E G+   P+  +Y+ +ID LC +G ++  
Sbjct: 907  AIYNILLNGYRIAGDTEKVCELFESMV----EQGM--NPDIKSYTVVIDTLCADGRLNDG 960

Query: 227  KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             + F Q+ D  + PD++TYN LIHGL  +    EA  L+ +M  +G+ P++ T+N ++  
Sbjct: 961  LSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILY 1020

Query: 287  LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            L K  K  EA ++ + ++ +G +PN  TYN L+ G+ + G    A   +G M   GC+ +
Sbjct: 1021 LGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPN 1080

Query: 347  DVSYNILIN 355
              +Y  L N
Sbjct: 1081 SSTYMQLPN 1089



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 160/330 (48%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +  ++F  M  Q ++ +V TF  +   +     +  A   L +M + G+  NA TYN L+
Sbjct: 119 DVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLI 178

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
                 G    A +++ +M + G      +Y++L+  + K ++ E  + L  EM ++G++
Sbjct: 179 YFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVR 238

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V +Y      L +  ++E A ++  +M+ +G   D  T T  I  LC  G + +A ++
Sbjct: 239 PNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDV 298

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  ++    + D   Y  L+D    SG  +   E++ +L       NVV+Y   +  LC 
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++D+A D+F +M++    P   +++ LI GF++ +  ++  EL + M      P+   
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYT 418

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
             + ++   K+  SLK+L  + + + +G V
Sbjct: 419 HVLFINYHGKSGESLKALKRYELMKSKGIV 448



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 19/242 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
            +EA  ++  ++    SP P + +  LL  L K+ + +   +A  LF         PN   
Sbjct: 853  DEAINLYYQLMSEGFSPTPCT-YGPLLDGLLKDGNIE---DAEALFDEMLECGCEPNCAI 908

Query: 99   YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            YNIL+N +   G        F  ++     P+  ++  +I  L A+ R+ +  + F +L 
Sbjct: 909  YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968

Query: 159  AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
              G EP++ITYN LI+GL ++G    AL+L+ +M            PN  TY+++I  L 
Sbjct: 969  DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG------IAPNLYTYNSLILYLG 1022

Query: 219  KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            K G   +A  ++ ++  +   P+V TYN+LI G   +     A   +  M+  G +P+  
Sbjct: 1023 KAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSS 1082

Query: 279  TF 280
            T+
Sbjct: 1083 TY 1084


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 153/506 (30%), Positives = 243/506 (48%), Gaps = 45/506 (8%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
           N  T+  LI  F K  RV      F ++ +S FTP+ + ++ +I GL     + +A  L+
Sbjct: 169 NKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLY 228

Query: 155 TKLKAFGCEPNV---------------------------------ITYNTLINGLCRTGH 181
           +++K F  +P+V                                 + YN+++N L   G 
Sbjct: 229 SEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGS 288

Query: 182 TMIALNLFEEMANGN----GEIG------VVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
              A +L + +  GN    GEIG       +  PN+ T+S +I+GL K G +D A  LF 
Sbjct: 289 VHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFR 348

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M      PD++ YN+LI GLC +N   E+  L  EM + G++P+  T N I   LC+  
Sbjct: 349 DMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRH 408

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
            +  A  LL  M   G  P      +L+   C  GK   A +    M   G + D V+Y+
Sbjct: 409 DISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYS 468

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
             ++G  K +EV++AL L++++ ++G  P V+ YN L  GL +  ++  A  L  EM+  
Sbjct: 469 ACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEK 528

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-CELDIQAYNCLIDGLCKSGRLKF 470
           G+     TY T IDGLCK  ++ EA+ LF ++ I K  E ++  Y+ LI+GLC +GR   
Sbjct: 529 GLVPSAVTYNTLIDGLCKTDHLEEAM-LFLSMMIEKEREPNVITYSTLINGLCNAGRPDD 587

Query: 471 AWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
           A  L+  +      P+ + Y   I GL N G+ ++A     +MEE    PD   +  L++
Sbjct: 588 ALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLN 647

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPD 556
            F+  +      E+L +M +K   PD
Sbjct: 648 AFLVDSNQPLAFEILQEMVDKGKFPD 673



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 224/506 (44%), Gaps = 43/506 (8%)

Query: 97  YTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           Y ++IL+  F K G+V         +       N  TF SLI G   ESR+ +A  LF K
Sbjct: 136 YVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDK 195

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM----------------ANGNGEIG 200
           +K  G  P++  Y+ +I GLC       AL L+ EM                ++ + E  
Sbjct: 196 MKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEE 255

Query: 201 VVC-----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN------------ 237
           + C           K +T+ Y+++++ L   G V KA  L   +   N            
Sbjct: 256 LTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFR 315

Query: 238 ----INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               + P+  T++ +I+GL    D + A  LF +M   G +P ++ +N ++D LC + ++
Sbjct: 316 GKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRL 375

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            E+  LL  M + G+ P + T N +    C    I+ A  L   M   G          L
Sbjct: 376 QESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSL 435

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           +   CK+ +  EA     +M  +G +P +V Y+    GL +I +V+ ALKLF ++   G 
Sbjct: 436 VKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGY 495

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   Y   I GLCK   I EA  L   +           YN LIDGLCK+  L+ A  
Sbjct: 496 CPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAML 555

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
               +      PNV+TY+ +I GLCN G+ D A  L+ +M      P  I +   IHG  
Sbjct: 556 FLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLS 615

Query: 534 RINEPSKVNELLHKMKEKKVMPDASI 559
               P++    L +M+E+++ PD  +
Sbjct: 616 NCGRPNEALVYLREMEEREMKPDTYV 641



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 173/357 (48%), Gaps = 24/357 (6%)

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
           +C PN+ +Y+ +++ L K   +D  +    +M D     D  T   ++   C+  ++++A
Sbjct: 61  LCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKA 120

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             +F E+ D+G     V F++++    K  K+D+A  L++ M ++ VR N  T+ +L+ G
Sbjct: 121 LDVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYG 179

Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
           F    ++++A  LF  M+  G   D   Y+++I G C NK+V++AL LY EM    I+P 
Sbjct: 180 FVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPD 239

Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTTFIDGLCKNGYIIEAVELF 440
           V     L   +    + E     F+EM  D    A T  Y + ++ L  NG + +A  L 
Sbjct: 240 VKIVTKL---ISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLL 296

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
           + + I          NC+ DG  + G+L             ++ PN  T++I+I GL   
Sbjct: 297 QAITI---------GNCIGDG--EIGKLFRG--------KAMVPPNSTTFSIVINGLIKT 337

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
           G +D A  LF DM      PD++ ++ LI G    N   +   LL +M+E  + P +
Sbjct: 338 GDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTS 394



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 2/229 (0%)

Query: 326 GKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
           G +  A  LF  ++ MG C  +  SY  L+    K+  ++      +EM   G      T
Sbjct: 44  GLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYT 103

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
              +      + + + AL +F+E+   G   D   ++  +    K G + +A EL  T+ 
Sbjct: 104 LTPVLQVYCNMAEFDKALDVFNEIHDRG-WVDEYVFSILVLAFSKWGKVDKACELIETME 162

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
                L+ + +  LI G  K  R+  A  LF  +      P++  Y+++I GLC +  + 
Sbjct: 163 EKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVK 222

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           KA  L+ +M+     PDV     LI  F +  E +   E +H+  + K 
Sbjct: 223 KALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKA 271



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 1/165 (0%)

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
           EM   G   D  T T  +   C      +A+++F  +   +  +D   ++ L+    K G
Sbjct: 91  EMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHD-RGWVDEYVFSILVLAFSKWG 149

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
           ++  A EL  ++    +  N  T+  +I G   + ++DKA  LF  M+++   PD+  +D
Sbjct: 150 KVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYD 209

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           ++I G     +  K   L  +MK  K+ PD  IV+ ++    K E
Sbjct: 210 VIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEE 254



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 6/194 (3%)

Query: 404 LFDEMQRDGV-AADTRTYTTFIDGLCKNGYIIEAVEL-FRTLRILKCELDIQAYNCLIDG 461
           LFD++Q+ G+   ++ +YT  ++ L K+   I+ +E+  + +       D      ++  
Sbjct: 52  LFDQVQKMGLCVPNSYSYTCLLEVLSKS-ICIDLLEMRLKEMHDHGWGFDKYTLTPVLQV 110

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C       A ++F  +     V   V ++I++      G++DKA +L   MEE     +
Sbjct: 111 YCNMAEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETMEEKNVRLN 169

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
             TF  LI+GF++ +   K   L  KMK+    PD S+  +++  L  N+   K+L   L
Sbjct: 170 KKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKAL--CL 227

Query: 582 VQERQGEVGESNVK 595
             E +G   + +VK
Sbjct: 228 YSEMKGFKIQPDVK 241


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 254/508 (50%), Gaps = 31/508 (6%)

Query: 63  SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           SPP   +F +L+ S  ++   D       R++  G  P    YN +I+CF ++GRV    
Sbjct: 221 SPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEAL 280

Query: 117 IAFGRILRSCFT--PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
             F     SC    P+  ++N+++KGL    R  +A  L T++    C P+ +T+NT+I+
Sbjct: 281 HLF-----SCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVIS 335

Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
            LC  G    AL + ++M           KP+  TYS +I+   ++G V+ A  L   M 
Sbjct: 336 FLCHKGLVDCALEVVDQMPKYGR------KPDNFTYSALINAFSEQGCVEDALELLRSMP 389

Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
               +P+ V Y S++ GLC    W +  +L  EM+     P  + F +I+D LC+   +D
Sbjct: 390 ---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVD 446

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
               +L  +   G  P+   Y +L++GF   G+++ + +LF   +SM CK + V+YN ++
Sbjct: 447 CGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLF---KSMTCKPNTVTYNYVL 503

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
            G CK +  E+A  L  EMV +   P  +T++ L   L +   VE A+ +F++MQ  G  
Sbjct: 504 MGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCT 563

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +   Y+T  +GL + G +  A++L   +    C+ D   Y+  + GLC++   + A EL
Sbjct: 564 PNVIIYSTLNNGLSEKGCVDNALKLLNNM---SCKADTICYSSALKGLCRAELWEDAGEL 620

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              +      P+ VT++I+I  LC  G ++ A ++   M +    P+++ +  LI+GF  
Sbjct: 621 IVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGF-- 678

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSI 562
            +E   + + L  ++     PD S+ ++
Sbjct: 679 -SEHGHLEDALKLLRSMPCEPDTSVTAL 705



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 238/510 (46%), Gaps = 24/510 (4%)

Query: 62  PSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P  P   ++N LL  L   K +         +      P+  T+ +LI+ FC+ G V   
Sbjct: 185 PPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRA 244

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
                R+ +   TP A  +N +I       R+ EA  LF+ +    C+P++ +YN ++ G
Sbjct: 245 MGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKG 301

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           LCR      A  L  EM   +      C P+ VT++T+I  LC +G VD A  +  QM  
Sbjct: 302 LCRAERWEDAGELITEMVRKD------CSPDEVTFNTVISFLCHKGLVDCALEVVDQMPK 355

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
               PD  TY++LI+         +A  L   M      P+ V +  ++  LC++ + ++
Sbjct: 356 YGRKPDNFTYSALINAFSEQGCVEDALELLRSM---PCSPNTVCYKSVLKGLCRDGQWED 412

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
             +L+  MV+    P+   +  ++D  C  G ++   E+   + + GC  D V Y  L+N
Sbjct: 413 VGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLN 472

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+ +   V+++L L++ M     KP  VTYN + +GL ++   E A KL DEM       
Sbjct: 473 GFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPP 529

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T++  I  LC+ G +  A+++F  +++  C  ++  Y+ L +GL + G +  A +L 
Sbjct: 530 NEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLL 589

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
            ++       + + Y+  ++GLC     + A +L ++M      PD +TF ++I    + 
Sbjct: 590 NNMSCKA---DTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQ 646

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
                  E+   M + +  P+  I S +++
Sbjct: 647 GFVEYATEVSDLMLKYECTPNIVIYSSLIN 676



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 212/444 (47%), Gaps = 23/444 (5%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P       LIK L A  R+ +A  +    +A     + + +NTL+ G CR G    A  +
Sbjct: 91  PAVVPCTLLIKKLCAAGRLADAEGVLRASEAA----DAVDHNTLVAGYCRAGRLADAERM 146

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
              +A            + VTY+T+I G C+ G ++ A+ L   M      P+   YN+L
Sbjct: 147 LRSLAASGAA-------DVVTYNTLIAGYCRGGRLEDARLLVASMPPA---PNSYAYNTL 196

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           + GLC A  W +A+ L  EM      P  +TF +++   C++  +D A  +LD M + G 
Sbjct: 197 LKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGC 256

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P A  YN ++  F  +G++  A  LF  M    CK D  SYN ++ G C+ +  E+A  
Sbjct: 257 TPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGE 313

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L  EMV K   P  VT+NT+   L     V+ AL++ D+M + G   D  TY+  I+   
Sbjct: 314 LITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFS 373

Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
           + G + +A+EL R+   + C  +   Y  ++ GLC+ G+ +   +L   +      P+ +
Sbjct: 374 EQGCVEDALELLRS---MPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEM 430

Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
            + ++I  LC  G +D   ++  ++     +PDV+ +  L++GF    E  +V++ L   
Sbjct: 431 VFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFA---EYGRVDDSLKLF 487

Query: 549 KEKKVMPDASIVSIVVDLLVKNEI 572
           K     P+    + V+  L K E+
Sbjct: 488 KSMTCKPNTVTYNYVLMGLCKVEL 511



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 226/456 (49%), Gaps = 19/456 (4%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNS 136
           LA  +     L A+G   ++ TYN LI  +C+ GR+    +    +  +   PN+  +N+
Sbjct: 140 LADAERMLRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARLLVASMPPA---PNSYAYNT 195

Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
           L+KGL +  +  +A  L  ++      P+ +T+  LI+  C++G    A+ + + M+   
Sbjct: 196 LLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCG 255

Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
                 C P  + Y+ II    + G V +A  LF  M      PD+ +YN+++ GLC A 
Sbjct: 256 ------CTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAE 306

Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
            W +A  L  EM+ +   P  VTFN ++  LC    +D A  ++D M + G +P+  TY+
Sbjct: 307 RWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYS 366

Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
            L++ F   G +  A EL   + SM C  + V Y  ++ G C++ + E+   L  EMV  
Sbjct: 367 ALINAFSEQGCVEDALEL---LRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRN 423

Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
              P  + +  +   L +   V+  L++  E+   G + D   YT+ ++G  + G + ++
Sbjct: 424 DCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDS 483

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
           ++LF++   + C+ +   YN ++ GLCK    + A +L   +      PN +T++I+I  
Sbjct: 484 LKLFKS---MTCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISS 540

Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           LC  G ++ A D+F  M+     P+VI +  L +G 
Sbjct: 541 LCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGL 576



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 231/535 (43%), Gaps = 55/535 (10%)

Query: 64  PPPVSSFNILLASLAKNKHYDTRLNATGLF---PNLYTYNILINCFCKIGRVSLGFIAFG 120
           PP   + N  L    +    D  L   G     P +    +LI   C  GR++    A G
Sbjct: 58  PPRRGAANDRLHHFIRLGDLDAALQLVGSMSEPPAVVPCTLLIKKLCAAGRLA---DAEG 114

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            +LR+    +A   N+L+ G     R+ +A  +   L A G   +V+TYNTLI G CR G
Sbjct: 115 -VLRASEAADAVDHNTLVAGYCRAGRLADAERMLRSLAASG-AADVVTYNTLIAGYCRGG 172

Query: 181 ---------------------HTMI-----------ALNLFEEMANGNGEIGVVCKPNTV 208
                                +T++           A  L EEM   +        P+ +
Sbjct: 173 RLEDARLLVASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDS------PPDDL 226

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           T+  +I   C+ G VD+A  +  +M      P  + YN +I          EA  LF  M
Sbjct: 227 TFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCM 286

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
                +P + ++N ++  LC+  + ++A  L+  MV++   P+  T+NT++   C  G +
Sbjct: 287 ---PCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLV 343

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
           + A E+   M   G K D+ +Y+ LIN + +   VE+AL L R M      P  V Y ++
Sbjct: 344 DCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSM---PCSPNTVCYKSV 400

Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
             GL    Q E   +L  EM R+  A D   +   ID LC+ G +   +E+ + +    C
Sbjct: 401 LKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGC 460

Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
             D+  Y  L++G  + GR+  + +LF S+      PN VTYN ++ GLC     + A  
Sbjct: 461 SPDVVMYTSLLNGFAEYGRVDDSLKLFKSM---TCKPNTVTYNYVLMGLCKVELWEDAGK 517

Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           L  +M      P+ +TF +LI    +        ++  KM+     P+  I S +
Sbjct: 518 LIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTL 572



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 200/402 (49%), Gaps = 27/402 (6%)

Query: 57  MLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCFCKIG 110
           M+R   SP  V+ FN +++ L      D  L         G  P+ +TY+ LIN F + G
Sbjct: 318 MVRKDCSPDEVT-FNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQG 376

Query: 111 RVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
            V         +LRS   +PN   + S++KGL  + +  +   L  ++    C P+ + +
Sbjct: 377 CVEDAL----ELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVF 432

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
             +I+ LC+ G     L + +E+ N        C P+ V Y+++++G  + G VD +  L
Sbjct: 433 GLIIDCLCQRGLVDCGLEVLQEVPNYG------CSPDVVMYTSLLNGFAEYGRVDDSLKL 486

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
           F  M      P+ VTYN ++ GLC    W +A +L  EM+ Q   P+ +TF++++  LC+
Sbjct: 487 FKSM---TCKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQ 543

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
              ++ A  + + M   G  PN   Y+TL +G    G ++ A +L   + +M CK D + 
Sbjct: 544 KGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKL---LNNMSCKADTIC 600

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y+  + G C+ +  E+A  L  EM  K   P  VT++ +   L +   VE+A ++ D M 
Sbjct: 601 YSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLML 660

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           +     +   Y++ I+G  ++G++ +A++L R+   + CE D
Sbjct: 661 KYECTPNIVIYSSLINGFSEHGHLEDALKLLRS---MPCEPD 699



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 176/406 (43%), Gaps = 23/406 (5%)

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
           P     N  ++   R G    AL L   M+           P  V  + +I  LC  G +
Sbjct: 59  PRRGAANDRLHHFIRLGDLDAALQLVGSMSE---------PPAVVPCTLLIKKLCAAGRL 109

Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
             A+ +    +      D V +N+L+ G C A    +A+R+   +   G    VVT+N +
Sbjct: 110 ADAEGVLRASEAA----DAVDHNTLVAGYCRAGRLADAERMLRSLAASGAA-DVVTYNTL 164

Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
           +   C+  ++++A  L+  M      PN+  YNTL+ G C   +   AEEL   M     
Sbjct: 165 IAGYCRGGRLEDARLLVASMPP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDS 221

Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
             DD+++ +LI+ +C++  V+ A+ +   M   G  P  + YN +     E+ +V+ AL 
Sbjct: 222 PPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALH 281

Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
           LF  M       D  +Y   + GLC+     +A EL   +    C  D   +N +I  LC
Sbjct: 282 LFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLC 338

Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
             G +  A E+   +P     P+  TY+ +I      G ++ A +L   M     +P+ +
Sbjct: 339 HKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSM---PCSPNTV 395

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +  ++ G  R  +   V +L+ +M      PD  +  +++D L +
Sbjct: 396 CYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQ 441


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 231/483 (47%), Gaps = 6/483 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN LI    K G        +  +      P   T++ L+        
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
                 L  +++A G  PNV +Y   I  L + G    A  +  +M          CKP+
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEG------CKPD 275

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            VT + +I  LC  G +  AK +F +MK  +  PD VTY +L+     + D      ++ 
Sbjct: 276 VVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWN 335

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            +   G   +VV++   +D LC+  ++DEA  + D M Q+G+ P   +YN+L+ GF    
Sbjct: 336 ALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKAD 395

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           + NRA ELF  M   G   +  ++ + IN + K+ E  +AL  Y  M SKGI P VV  N
Sbjct: 396 RFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL +  ++  A ++F E++  G++ D  TYT  I    K     EA+++F  +   
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIEN 515

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
           +C  D+ A N LID L K+GR   AW++F  L    L P   TYN ++ GL  +G++ + 
Sbjct: 516 RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEV 575

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L   M  N+  P++IT++ ++    +  E +   ++L+ M     MPD S  + V+  
Sbjct: 576 MQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYG 635

Query: 567 LVK 569
           LVK
Sbjct: 636 LVK 638



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 257/502 (51%), Gaps = 18/502 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++++L+ +  K +  +T       + A G+ PN+Y+Y I I    + GR+   +  
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRI 263

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
             ++      P+  T   LI+ L    R+ +A  +F K+KA   +P+ +TY TL++    
Sbjct: 264 LRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGD 323

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
           +G +     ++  + A+G  +       N V+Y+  +D LC+ G VD+A  +F +MK + 
Sbjct: 324 SGDSRSVSEIWNALKADGYND-------NVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I P   +YNSLI G   A+ +N A  LF  M   G  P+  T  + ++   K+ +  +A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +  +LM  +G+ P+    N ++ G    G++  A+ +F  +++MG   D+++Y ++I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            K    +EA+ ++ EM+     P V+  N+L   L++  +   A K+F E++   +    
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY T + GL + G + E ++L   +       +I  YN ++D LCK+G + +A ++  S
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +     +P++ +YN ++ GL  +G++D+A  +F  M++   APD  T   ++  F+R   
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKK-VLAPDYATVCTILPSFVR--- 672

Query: 538 PSKVNELLHKMKEKKVMPDASI 559
              + E LH ++E  + PD+ +
Sbjct: 673 SGLMKEALHTVREYILQPDSKV 694



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 240/510 (47%), Gaps = 14/510 (2%)

Query: 65  PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V + N +L  LAK       K     L A G+ P+  TY ++I C  K          
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           F  ++ +   P+    NSLI  L+   R  EA  +F +LK    EP   TYNTL+ GL R
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR 568

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G     + L E M N N        PN +TY+T++D LCK G V+ A  +   M     
Sbjct: 569 EGKVKEVMQLLEGM-NSNS-----FPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGC 622

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA-S 297
            PD+ +YN++++GL      +EA  +F +M  + + P   T   I+    ++  M EA  
Sbjct: 623 MPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALH 681

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            + + ++Q   + +  + ++LM+G        ++ E   ++ S G   DD+  + +I  +
Sbjct: 682 TVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHF 741

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+KE   A  L ++  + G+     +YN L  GL +   ++ A +LF EM+R G   D 
Sbjct: 742 CKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDE 801

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
            TY   +D + K+  I + +++   +     +     YN +I GL KS  L  A  L+  
Sbjct: 802 FTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           L      P   TY  ++ GL  DG ++ A  LF +M E    P+   +++L++G+    +
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
             KV EL   M E+ + PD    ++V+D L
Sbjct: 922 TEKVCELFESMVEQGMNPDIKSYTVVIDTL 951



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 251/548 (45%), Gaps = 40/548 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            NEA+ IF Y L+     P   ++N LLA L +             +N+    PN+ TYN 
Sbjct: 538  NEAWKIF-YELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNT 596

Query: 102  LINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +++C CK G V+    + +   +  C  P+ +++N+++ GL  E R+ EA  +F ++K  
Sbjct: 597  VLDCLCKNGEVNYALDMLYSMTMNGCM-PDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV 655

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEE---------------------MANGNGEI 199
               P+  T  T++    R+G    AL+   E                     +     E 
Sbjct: 656  -LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEK 714

Query: 200  GVVCKPNTVTYSTIIDGL---------CKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
             +    N  +   ++D L         CK      A  L  + ++  ++    +YN+LI 
Sbjct: 715  SIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774

Query: 251  GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            GL   +  + A+ LF EM   G  P   T+++I+D + K+ ++++  ++ + M  +G + 
Sbjct: 775  GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834

Query: 311  NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               TYNT++ G      ++ A  L+  + S G      +Y  L++G  K+  +E+A +L+
Sbjct: 835  TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALF 894

Query: 371  REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             EM+  G +P    YN L  G       E   +LF+ M   G+  D ++YT  ID LC +
Sbjct: 895  DEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954

Query: 431  GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            G + + +  F+ L  +  E D+  YN LI GL KSGRL+ A  L+  +    + PN+ TY
Sbjct: 955  GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014

Query: 491  NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            N +I  L   G+  +A  ++ ++      P+V T++ LI G+     P        +M  
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIV 1074

Query: 551  KKVMPDAS 558
                P++S
Sbjct: 1075 GGCRPNSS 1082



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 236/500 (47%), Gaps = 48/500 (9%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L A G   N+ +Y   ++  C++GRV      F  + +    P   ++NSLI G     R
Sbjct: 337 LKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADR 396

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
              A  LF  +   G  PN  T+   IN   ++G ++ AL  +E M +     G+V  P+
Sbjct: 397 FNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSK----GIV--PD 450

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V  + ++ GL K G +  AK +F ++K   I+PD +TY  +I     A++ +EA ++F 
Sbjct: 451 VVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFA 510

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM++    P V+  N ++D L K  + +EA ++   + +  + P  CTYNTL+ G    G
Sbjct: 511 EMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREG 570

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           K+    +L   M S     + ++YN +++  CKN EV  AL +   M   G  P + +YN
Sbjct: 571 KVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYN 630

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           T+  GL +  +++ A  +F +M++  +A D  T  T +    ++G + EA+   R   IL
Sbjct: 631 TVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREY-IL 688

Query: 447 K--CELDIQAYNCLIDGLCK----SGRLKFAWEL------------------FCSLPHGV 482
           +   ++D  + + L++G+ K       ++FA  +                  FC     +
Sbjct: 689 QPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEAL 748

Query: 483 LVPNVV-------------TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
               +V             +YN +I GL ++  +D A +LF +M+     PD  T+ +++
Sbjct: 749 AAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLIL 808

Query: 530 HGF---IRINEPSKVNELLH 546
                 +RI +  K+ E +H
Sbjct: 809 DAMGKSMRIEDMLKIQEEMH 828



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 178/357 (49%), Gaps = 6/357 (1%)

Query: 134  FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
             + +I+        + A  L  K +  G      +YN LI GL       IA  LF EM 
Sbjct: 734  LSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMK 793

Query: 194  NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
                   + C P+  TY  I+D + K   ++    +  +M ++      VTYN++I GL 
Sbjct: 794  R------LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847

Query: 254  HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             +   +EA  L+ ++M +G  P+  T+  ++D L K+  +++A  L D M++ G  PN  
Sbjct: 848  KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907

Query: 314  TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
             YN L++G+ + G   +  ELF SM   G   D  SY ++I+  C +  + + LS ++++
Sbjct: 908  IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 374  VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
               G++P ++TYN L  GL +  ++E AL L+++M++ G+A +  TY + I  L K G  
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 434  IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
             EA +++  L     + ++  YN LI G   SG  + A+  +  +  G   PN  TY
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 227/504 (45%), Gaps = 49/504 (9%)

Query: 64   PPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFI 117
            PP + ++N +L  L KN   +  L+        G  P+L +YN ++    K GR+   F 
Sbjct: 588  PPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFW 647

Query: 118  AFGRILRSCFTPNAATFNSLIKG------------------LHAESRIMEAAA---LFTK 156
             F + ++    P+ AT  +++                    L  +S++  ++    +   
Sbjct: 648  MFCQ-MKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGI 706

Query: 157  LKAFGCEPNV---------------ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
            LK  G E ++               +  + +I   C+    + A  L ++  N    +GV
Sbjct: 707  LKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFEN----LGV 762

Query: 202  VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
              K  T +Y+ +I GL  E  +D A+ LF +MK    +PD  TY+ ++  +  +    + 
Sbjct: 763  SLK--TGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820

Query: 262  KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
             ++  EM ++G + + VT+N I+  L K++ +DEA  L   ++  G  P  CTY  L+DG
Sbjct: 821  LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880

Query: 322  FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
                G I  AE LF  M   GC+ +   YNIL+NGY    + E+   L+  MV +G+ P 
Sbjct: 881  LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 382  VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
            + +Y  +   L    ++   L  F ++   G+  D  TY   I GL K+G + EA+ L+ 
Sbjct: 941  IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000

Query: 442  TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
             +       ++  YN LI  L K+G+   A +++  L      PNV TYN +I+G    G
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSG 1060

Query: 502  QMDKARDLFLDMEENAAAPDVITF 525
              + A   +  M      P+  T+
Sbjct: 1061 SPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 239/530 (45%), Gaps = 15/530 (2%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNI 101
           +EA  +FD M +     P   S+N L++   K   ++  L      N  G  PN YT+ +
Sbjct: 363 DEALDVFDEM-KQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            IN   K G        +  +      P+    N+++ GL    R+  A  +F +LKA G
Sbjct: 422 FINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG 481

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
             P+ ITY  +I    +  +   A+ +F EM          C P+ +  +++ID L K G
Sbjct: 482 ISPDNITYTMMIKCCSKASNADEAMKIFAEMIENR------CAPDVLAMNSLIDMLYKAG 535

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             ++A  +F ++K+ N+ P   TYN+L+ GL       E  +L   M      P+++T+N
Sbjct: 536 RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYN 595

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
            ++D LCKN +++ A  +L  M   G  P+  +YNT+M G    G+++ A  +F  M+ +
Sbjct: 596 TVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV 655

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYRE-MVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
               D  +   ++  + ++  ++EAL   RE ++    K    + ++L  G+ +    E 
Sbjct: 656 -LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEK 714

Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
           +++  + +   G+  D    +  I   CK+   + A EL +    L   L   +YN LI 
Sbjct: 715 SIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774

Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
           GL     +  A ELF  +      P+  TY++++  +    +++    +  +M       
Sbjct: 775 GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834

Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +T++ +I G ++     +   L +++  +   P       ++D L+K+
Sbjct: 835 TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 884



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 193/438 (44%), Gaps = 46/438 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVC-----------KPNTVTYSTIIDGLCKEGFVDKA 226
           R  HT  + N   E+   +G +G V            K N  T+ T+   +  EG +  A
Sbjct: 96  RVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSA 155

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 MK+  I  +  TYN LI+ L  +    EA  ++  M   GV P+V T++V+M  
Sbjct: 156 PVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLA 215

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K R  +    LL  M  RGVRPN  +Y   +      G++  A  +   ME  GCK D
Sbjct: 216 FGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPD 275

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            V+  +LI   C    + +A  ++ +M +   KP  VTY TL     +        ++++
Sbjct: 276 VVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWN 335

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            ++ DG   +  +YT  +D LC+ G + EA+++F  ++         +YN LI G  K+ 
Sbjct: 336 ALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKAD 395

Query: 467 RLKFAWELFCSL------PHGV-----------------------------LVPNVVTYN 491
           R   A ELF  +      P+G                              +VP+VV  N
Sbjct: 396 RFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGN 455

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++ GL   G++  A+ +F +++    +PD IT+ M+I    + +   +  ++  +M E 
Sbjct: 456 AVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIEN 515

Query: 552 KVMPDASIVSIVVDLLVK 569
           +  PD   ++ ++D+L K
Sbjct: 516 RCAPDVLAMNSLIDMLYK 533



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 156/309 (50%), Gaps = 13/309 (4%)

Query: 53   IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCF 106
            +F  M R+   P   + ++++L ++ K+   +  L      +  G      TYN +I+  
Sbjct: 788  LFSEMKRLGCDPDEFT-YHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846

Query: 107  CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
             K   +      + +++   F+P   T+  L+ GL  +  I +A ALF ++   GCEPN 
Sbjct: 847  VKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNC 906

Query: 167  ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
              YN L+NG    G T     LFE M     E G+   P+  +Y+ +ID LC +G ++  
Sbjct: 907  AIYNILLNGYRIAGDTEKVCELFESMV----EQGM--NPDIKSYTVVIDTLCADGRLNDG 960

Query: 227  KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
             + F Q+ D  + PD++TYN LIHGL  +    EA  L+ +M  +G+ P++ T+N ++  
Sbjct: 961  LSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILY 1020

Query: 287  LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
            L K  K  EA ++ + ++ +G +PN  TYN L+ G+ + G    A   +G M   GC+ +
Sbjct: 1021 LGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPN 1080

Query: 347  DVSYNILIN 355
              +Y  L N
Sbjct: 1081 SSTYMQLPN 1089



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 160/330 (48%)

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           +  ++F  M  Q ++ +V TF  +   +     +  A   L +M + G+  NA TYN L+
Sbjct: 119 DVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLI 178

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
                 G    A +++ +M + G      +Y++L+  + K ++ E  + L  EM ++G++
Sbjct: 179 YFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVR 238

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P V +Y      L +  ++E A ++  +M+ +G   D  T T  I  LC  G + +A ++
Sbjct: 239 PNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDV 298

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
           F  ++    + D   Y  L+D    SG  +   E++ +L       NVV+Y   +  LC 
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
            G++D+A D+F +M++    P   +++ LI GF++ +  ++  EL + M      P+   
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYT 418

Query: 560 VSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
             + ++   K+  SLK+L  + + + +G V
Sbjct: 419 HVLFINYHGKSGESLKALKRYELMKSKGIV 448



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 19/242 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYT 98
            +EA  ++  ++    SP P + +  LL  L K+ + +   +A  LF         PN   
Sbjct: 853  DEAINLYYQLMSEGFSPTPCT-YGPLLDGLLKDGNIE---DAEALFDEMLECGCEPNCAI 908

Query: 99   YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
            YNIL+N +   G        F  ++     P+  ++  +I  L A+ R+ +  + F +L 
Sbjct: 909  YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968

Query: 159  AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
              G EP++ITYN LI+GL ++G    AL+L+ +M            PN  TY+++I  L 
Sbjct: 969  DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG------IAPNLYTYNSLILYLG 1022

Query: 219  KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
            K G   +A  ++ ++  +   P+V TYN+LI G   +     A   +  M+  G +P+  
Sbjct: 1023 KAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSS 1082

Query: 279  TF 280
            T+
Sbjct: 1083 TY 1084


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 254/533 (47%), Gaps = 56/533 (10%)

Query: 69  SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
           +F +++  LA +   D+      ++   G   +   +  +I+ + ++G        F RI
Sbjct: 78  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137

Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
                 P+   +N ++  L  E+RI     ++  +K  G EPNV TYN L+  LC+    
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197

Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
             A  L  EM+N        C P+ V+Y+T+I  +C+ G V + + L      E   P V
Sbjct: 198 DGAKKLLVEMSNKG------CCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVV 246

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
             YN+LI+GLC  +D+  A  L  EM+++G+ P+V++++ +++ LC + +++ A   L  
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306

Query: 303 MVQRG------------------------------------VRPNACTYNTLMDGFCLMG 326
           M++RG                                    ++PN   YNTL+ GFC  G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
            I +A  +F  ME +GC  +  +Y  LING+ K   ++ A+ ++ +M++ G  P VV Y 
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL-RI 445
            +   L    + + A  L + M ++  A    T+  FI GLC  G +  A ++FR + + 
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
            +C  +I  YN L+DGL K+ R++ A+ L   +    +  +  TYN ++ G CN G    
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK--EKKVMPD 556
           A  L   M  +  +PD IT +M+I  + +  +  +  ++L  +    +K  PD
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 233/490 (47%), Gaps = 55/490 (11%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++N+LL +L KN   D        ++  G  P+  +Y  +I+  C++G      + 
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-----LVK 233

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            GR L   F P  + +N+LI GL  E     A  L  ++   G  PNVI+Y+TLIN LC 
Sbjct: 234 EGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293

Query: 179 TGH-----------------------------------TMIALNLFEEMANGNGEIGVVC 203
           +G                                    T  AL+L+ +M  G G      
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG-----L 348

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
           +PN V Y+T++ G C  G + KA ++F  M++   +P++ TY SLI+G       + A  
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           ++ +M+  G  P+VV +  +++ LC++ K  EA  L+++M +    P+  T+N  + G C
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468

Query: 324 LMGKINRAEELFGSMESMG-CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
             G+++ AE++F  ME    C  + V+YN L++G  K   +EEA  L RE+  +G++ + 
Sbjct: 469 DAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSS 528

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            TYNTL  G         AL+L  +M  DG + D  T    I   CK G    A ++   
Sbjct: 529 STYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDL 588

Query: 443 LRI--LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
           +     K   D+ +Y  +I GLC+S   +    L   +    +VP++ T++++I     D
Sbjct: 589 VSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILD 648

Query: 501 GQMDKARDLF 510
             + +A D F
Sbjct: 649 -DIVRAHDQF 657



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 199/432 (46%), Gaps = 16/432 (3%)

Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFT--KLKAFGCEPNVITYNTLINGLCRTGHTMI 184
           F     TF  +I+ L  + ++     L    KL+ F C  ++  + ++I+   + G    
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAER 129

Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           A+ +F  +     E G  C P+   Y+ ++D L  E  +     ++  MK +   P+V T
Sbjct: 130 AVEMFYRIK----EFG--CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183

Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
           YN L+  LC  N  + AK+L +EM ++G  P  V++  ++  +C+   + E   L +   
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF- 242

Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
                P    YN L++G C       A EL   M   G   + +SY+ LIN  C + ++E
Sbjct: 243 ----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298

Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD-GVAADTRTYTTF 423
            A S   +M+ +G  P + T ++L  G F       AL L+++M R  G+  +   Y T 
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G C +G I++AV +F  +  + C  +I+ Y  LI+G  K G L  A  ++  +     
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            PNVV Y  M++ LC   +  +A  L   M +   AP V TF+  I G           +
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478

Query: 544 LLHKMKEKKVMP 555
           +  +M+++   P
Sbjct: 479 VFRQMEQQHRCP 490



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 184/388 (47%), Gaps = 11/388 (2%)

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
           +AL+ F+ +AN N     + K   +T+  +I  L  +G VD  + L  QMK +  +    
Sbjct: 58  LALHFFKSIANSN-----LFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSED 112

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
            + S+I           A  +F  + + G  PSV  +N ++D L    ++     +   M
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 172

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            + G  PN  TYN L+   C   K++ A++L   M + GC  D VSY  +I+  C+   V
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           +E     RE+  +  +P V  YN L  GL + H  + A +L  EM   G++ +  +Y+T 
Sbjct: 233 KEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV- 482
           I+ LC +G I  A      +    C  +I   + L+ G    G    A +L+  +  G  
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG 347

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           L PNVV YN ++QG C+ G + KA  +F  MEE   +P++ T+  LI+GF +        
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
            + +KM      P+  + + +V+ L ++
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRH 435



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 16/172 (9%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------GLFPNLYTYNILINCF 106
           +F  M + H  PP + ++N LL  LAK    +     T      G+  +  TYN L++  
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538

Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG---CE 163
           C  G   +     G+++    +P+  T N +I     + +  E AA    L + G     
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK-AERAAQMLDLVSCGRRKWR 597

Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
           P+VI+Y  +I GLCR+      + L E M +     G+V  P+  T+S +I+
Sbjct: 598 PDVISYTNVIWGLCRSNCREDGVILLERMISA----GIV--PSIATWSVLIN 643


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/580 (26%), Positives = 255/580 (43%), Gaps = 94/580 (16%)

Query: 50  AFCIFDYMLRMHPSPPPVSS-FNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
           A   F  +  +  +PPP +  +N L+ +  +    D        L  +G  P+++T N+L
Sbjct: 92  AIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLL 151

Query: 103 INCFCKIGRV----------------SLGFIAFG-----------RILRSCFTPNAATFN 135
           +   C  GR+                S G +A G           ++L    + N    N
Sbjct: 152 LQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCN 211

Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
           +++ G   E  + EA  L  +++  G  PNV+T+N  I+ LC+ G  + A  +F++M   
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE- 270

Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
           + + G+  +P+ VT+  ++ G C  GFVD+A+ L   M+       V +YN  + GL   
Sbjct: 271 DWQHGLP-RPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329

Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK----------------------- 292
               EA+ L  EM  +G+QP+  T+N+I+  LCK  K                       
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389

Query: 293 ------------MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
                       +  A+R+LD M Q+G  PN+ TYN L+      G+   AE L   M  
Sbjct: 390 TSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNE 449

Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREM-----------------------VSKG 377
            G   D    NI+I+G C+N  ++ A+ +   M                       +S+ 
Sbjct: 450 KGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQR 509

Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
             P  +TY+ L   L +  + + A K   EM    ++ D+  Y TFI G CK+G    A+
Sbjct: 510 CLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAI 569

Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
           ++ R +    C    + YN LI G  +  + +   +L   +    + PNV+TYN +I+  
Sbjct: 570 KVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSF 629

Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           C  G ++KA  L  +M +N   P++ +FD+LI  + +I +
Sbjct: 630 CQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITD 669



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 262/576 (45%), Gaps = 55/576 (9%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGL----FPNLYT 98
           N  +P  A  +F + L     PPP  S + L   +A++   D  L         FP+   
Sbjct: 17  NAASPAVALRLFLH-LSSAACPPPPRSTSFLARLVAEHPAADALLPLLHRHILSFPDPSP 75

Query: 99  YNILINCFCKIGRVSLGFIAFG--RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
           + + +     +  + L   AF   R L S   P    +N LI     ESR+    AL+  
Sbjct: 76  HLLALLSCSDVLPLRLAIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKD 135

Query: 157 LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKP---------- 205
           L   G +P+V T N L+  LC  G   +A  +F+ M A      G++ +           
Sbjct: 136 LLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDA 195

Query: 206 ----------NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
                     N V  +T++ G CKEG V++A+ L  +M+ + + P+VVT+N+ I  LC A
Sbjct: 196 LKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKA 255

Query: 256 NDWNEAKRLFIEMMD---QGV-QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPN 311
               +A R+F +M +    G+ +P  VTF+V++   C    +DEA  L+D+M   G    
Sbjct: 256 GRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRR 315

Query: 312 ACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYR 371
             +YN  + G    G++  A+EL   M   G + +  +YNI+++G CK  +  +A  +  
Sbjct: 316 VESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVEN 375

Query: 372 EMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG 431
            + S  + P VVTY +L         +  A ++ DEM + G A ++ TY   +  L + G
Sbjct: 376 FIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435

Query: 432 YIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA-------WE----LFCSLPH 480
              EA  L   +      LD    N +IDGLC++ RL  A       WE        L +
Sbjct: 436 RTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGN 495

Query: 481 GVL------------VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             L            +P+ +TY+I+I  LC +G+ D+A+   L+M     +PD + +D  
Sbjct: 496 SFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTF 555

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           IHG+ +  + S   ++L  M++K   P     ++++
Sbjct: 556 IHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLI 591



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 211/452 (46%), Gaps = 33/452 (7%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF----TPNAATFNSLIKGL 141
           R+   GL PN+ T+N  I+  CK GRV   +  F  +          P+  TF+ ++ G 
Sbjct: 232 RMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGF 291

Query: 142 HAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGV 201
                + EA  L   ++  G    V +YN  ++GL R G    A  L  EMA+       
Sbjct: 292 CDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG----- 346

Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
             +PN+ TY+ I+ GLCKEG    A+ +   ++   ++PDVVTY SL+H  C   +   A
Sbjct: 347 -IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAA 405

Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
            R+  EM  +G  P+  T+NV++  L +  +  EA RLL+ M ++G   +    N ++DG
Sbjct: 406 NRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDG 465

Query: 322 FCLMGKINRA--------EELFGSMESMG---------------CKHDDVSYNILINGYC 358
            C   +++ A        EE  G++  +G               C  D ++Y+ILI+  C
Sbjct: 466 LCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALC 525

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K    +EA     EM+ K I P  V Y+T   G  +  +   A+K+  +M++ G    TR
Sbjct: 526 KEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTR 585

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           TY   I G  +     E ++L   ++      ++  YN LI   C+ G +  A  L   +
Sbjct: 586 TYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEM 645

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
               LVPN+ +++++I+  C       A+ +F
Sbjct: 646 LQNELVPNITSFDLLIKAYCKITDFPSAQMVF 677



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 205/431 (47%), Gaps = 34/431 (7%)

Query: 65  PPVSSFNILLASLAK-NKHYDTR-----LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P   ++NI+++ L K  K +D R     + +  + P++ TY  L++ +C  G ++     
Sbjct: 349 PNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRI 408

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +    PN+ T+N L++ L    R  EA  L  ++   G   +    N +I+GLCR
Sbjct: 409 LDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCR 468

Query: 179 TGHTMIALNLFEEM-ANGNGEIGVV----------------CKPNTVTYSTIIDGLCKEG 221
                +A+++ + M   G+G +G +                C P+ +TYS +I  LCKEG
Sbjct: 469 NSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEG 528

Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
             D+AK   L+M  ++I+PD V Y++ IHG C     + A ++  +M  +G  PS  T+N
Sbjct: 529 RFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYN 588

Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
           +++    +  K +E  +L+  M ++G+ PN  TYN+L+  FC  G +N+A  L   M   
Sbjct: 589 LLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQN 648

Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV-----TYNTLFLGLFEIH 396
               +  S+++LI  YCK  +   A  ++   +    +  V+     T  T +    E  
Sbjct: 649 ELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAK 708

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
            +   L++  EM+   V+  +  Y   I GLC+ G +  A  L + L   +   D  A+ 
Sbjct: 709 NI---LEMALEMR---VSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFM 762

Query: 457 CLIDGLCKSGR 467
            +ID L   G+
Sbjct: 763 PVIDALGDRGK 773



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 189/449 (42%), Gaps = 58/449 (12%)

Query: 67  VSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
           V S+N  L+ L +N            +   G+ PN YTYNI+++  CK G+         
Sbjct: 316 VESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVEN 375

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            I     +P+  T+ SL+    ++  I  A  +  ++   GC PN  TYN L+  L R G
Sbjct: 376 FIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
            T  A  L E M      +      +T   + IIDGLC+   +D A  +   M +E    
Sbjct: 436 RTTEAERLLERMNEKGYSL------DTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGA 489

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
                NS +  +  ++            + Q   P  +T+++++  LCK  + DEA + L
Sbjct: 490 LGRLGNSFLSVVSDSS------------ISQRCLPDQITYSILISALCKEGRFDEAKKKL 537

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M+ + + P++  Y+T + G+C  GK + A ++   ME  GC     +YN+LI G+ + 
Sbjct: 538 LEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEK 597

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
            + EE + L  EM  KGI P V+TYN+L     +   V  A+ L DEM ++ +  +  ++
Sbjct: 598 HKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSF 657

Query: 421 TTFIDGLCK----------------------------------NGYIIEAVELFRTLRIL 446
              I   CK                                   G  IEA  +      +
Sbjct: 658 DLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEM 717

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  +    Y  +I GLC+ G +  A  L 
Sbjct: 718 RVSIQSFPYKQIISGLCEVGEVDHAHSLL 746



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 42/320 (13%)

Query: 93  FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
            P+  TY+ILI+  CK GR          ++    +P++  +++ I G     +   A  
Sbjct: 511 LPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIK 570

Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
           +   ++  GC P+  TYN LI G      +   + L  EM     E G+   PN +TY++
Sbjct: 571 VLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMK----EKGI--SPNVMTYNS 624

Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND--------------- 257
           +I   C++G V+KA  L  +M    + P++ +++ LI   C   D               
Sbjct: 625 LIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTC 684

Query: 258 -------------------WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
                              W EAK +    ++  V      +  I+  LC+  ++D A  
Sbjct: 685 GQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHS 744

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI--LING 356
           LL L++ +    +   +  ++D     GK    + L   M  M  ++D +  +   +  G
Sbjct: 745 LLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADRNDGLGTDSGKITPG 804

Query: 357 YCKNKEVEEALSLYREMVSK 376
            CK++      S +R ++ +
Sbjct: 805 SCKHEHDRNGESDWRTLLHR 824


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 234/485 (48%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN L+    K G        +  ++     P+  T++ L+        
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +     L  +++A G +PNV +Y   I  L +      A  +  +M N        CKP+
Sbjct: 336 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPD 389

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T++ +I  LC  G +  AK +F +MK  +  PD VTY +L+       D      ++ 
Sbjct: 390 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 449

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G   +VV +  ++D LC+  ++ EA  + D M Q+G+ P   +YN+L+ GF    
Sbjct: 450 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 509

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +   A ELF  M+  G K +  ++ + IN Y K+ E  +A+  Y  M SKGI P VV  N
Sbjct: 510 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 569

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL +  ++  A ++F E++  GV+ DT TYT  I    K     EAV++F  +   
Sbjct: 570 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 629

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  D+ A N LID L K+GR   AW +F  L    L P   TYN ++ GL  +G++ + 
Sbjct: 630 NCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 689

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M  +   P++IT++ ++    +    +   ++L+ M  K  +PD S  + V+  
Sbjct: 690 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 749

Query: 567 LVKNE 571
           LVK E
Sbjct: 750 LVKEE 754



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 244/512 (47%), Gaps = 14/512 (2%)

Query: 65   PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V + N +L  LAK+      K     L A G+ P+  TY ++I C  K  +       
Sbjct: 563  PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 622

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  ++ +   P+    NSLI  L+   R  EA  +F +LK    EP   TYNTL+ GL R
Sbjct: 623  FYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGR 682

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G     ++L EEM + N        PN +TY+TI+D LCK G V+ A  +   M  +  
Sbjct: 683  EGKVKEVMHLLEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 736

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             PD+ +YN++I+GL     +NEA  +F +M  + + P   T   I+    K   M EA  
Sbjct: 737  IPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALH 795

Query: 299  LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            ++ D  +Q G + +  + ++LM+G      I ++ E    + S G   DD     LI   
Sbjct: 796  IIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 855

Query: 358  CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            CK K+  EA  L ++  S G+      YN+L  GL + + ++ A  LF EM+  G   D 
Sbjct: 856  CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 915

Query: 418  RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             TY   +D + K+  I E +++   +     E     YN +I GL KS RL+ A +L+ +
Sbjct: 916  FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 975

Query: 478  LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
            L      P   TY  ++ GL   G+++ A +LF +M E     +   +++L++G      
Sbjct: 976  LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 1035

Query: 538  PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              KV  L   M ++ + PD    +I++D L K
Sbjct: 1036 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1067



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 250/522 (47%), Gaps = 40/522 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
            +EA+ IF Y L+     P   ++N LLA L +        H    +  +   PNL TYN 
Sbjct: 652  DEAWRIF-YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 710

Query: 102  LINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +++C CK G V+    + +    + C  P+ +++N++I GL  E R  EA ++F ++K  
Sbjct: 711  ILDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 769

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI-----------GVVCKPN--- 206
               P+  T  T++    + G    AL++ ++     G             G++ K     
Sbjct: 770  -LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK 828

Query: 207  TVTYSTIIDG----------------LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
            ++ ++ II                  LCK+    +A  L  + K   ++     YNSLI 
Sbjct: 829  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLIC 888

Query: 251  GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            GL   N  + A+ LF EM + G  P   T+N+++D + K+ +++E  ++ + M ++G   
Sbjct: 889  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 948

Query: 311  NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               TYNT++ G     ++ +A +L+ ++ S G      +Y  L++G  K   +E+A +L+
Sbjct: 949  TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 1008

Query: 371  REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             EM+  G K     YN L  G       E    LF +M   G+  D ++YT  ID LCK 
Sbjct: 1009 NEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1068

Query: 431  GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            G + + +  FR L  +  E D+  YN LIDGL KS RL+ A  LF  +    +VPN+ TY
Sbjct: 1069 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1128

Query: 491  NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            N +I  L   G+  +A  ++ ++      P+V T++ LI G+
Sbjct: 1129 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1170



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 214/446 (47%), Gaps = 6/446 (1%)

Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
           GRV      F  + R     N  TF ++  GL  E  +  A      +K  G   N  TY
Sbjct: 229 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 288

Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
           N L+  L ++G    AL ++  M       GVV  P+  TYS ++    K   V+    L
Sbjct: 289 NGLVYFLVKSGFDREALEVYRVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWL 342

Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
             +M+   + P+V +Y   I  L  A  ++EA R+  +M ++G +P V+T  V++  LC 
Sbjct: 343 LREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD 402

Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
             ++ +A  +   M +   +P+  TY TL+D F   G      E++ +M++ G   + V+
Sbjct: 403 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 462

Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
           Y  +I+  C+   V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  M 
Sbjct: 463 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 522

Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
             G   +  T+  FI+   K+G  I+A++ +  ++      D+ A N ++ GL KSGRL 
Sbjct: 523 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 582

Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
            A  +F  L    + P+ +TY +MI+      + D+A  +F DM EN   PDV+  + LI
Sbjct: 583 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLI 642

Query: 530 HGFIRINEPSKVNELLHKMKEKKVMP 555
               +     +   + +++KE  + P
Sbjct: 643 DTLYKAGRGDEAWRIFYQLKEMNLEP 668



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 218/448 (48%), Gaps = 12/448 (2%)

Query: 65   PPVSSFNILLASLAKNKHYDTRLN-----ATGLFPNLYTYNILINCFCKIGRVSLGF-IA 118
            P +SS+N ++  L K + Y+   +        L P+  T   ++  F KIG +     I 
Sbjct: 738  PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHII 797

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
                L+     + ++ +SL++G+  ++ I ++      + + G   +      LI  LC+
Sbjct: 798  KDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCK 857

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                + A  L ++  +     GV  K  T  Y+++I GL  E  +D A+ LF +MK+   
Sbjct: 858  QKKALEAHELVKKFKS----FGVSLK--TGLYNSLICGLVDENLIDIAEGLFAEMKELGC 911

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             PD  TYN L+  +  +    E  ++  EM  +G + + VT+N I+  L K+R++++A  
Sbjct: 912  GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAID 971

Query: 299  LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L   ++ +G  P  CTY  L+DG    G+I  AE LF  M   GCK +   YNIL+NG+ 
Sbjct: 972  LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 1031

Query: 359  KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
                 E+   L+++MV +GI P + +Y  +   L +  Q+   L  F ++   G+  D  
Sbjct: 1032 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091

Query: 419  TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
            TY   IDGL K+  + EAV LF  ++      ++  YN LI  L K+G+   A +++  L
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151

Query: 479  PHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
                  PNV TYN +I+G    G  D A
Sbjct: 1152 LTKGWKPNVFTYNALIRGYSVSGSTDSA 1179



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 216/464 (46%), Gaps = 17/464 (3%)

Query: 58  LRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGR 111
           +  H   P V S+ I +  L + K +D       ++   G  P++ T+ +LI   C  GR
Sbjct: 346 MEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGR 405

Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
           +S     F ++ +S   P+  T+ +L+              ++  +KA G   NV+ Y  
Sbjct: 406 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTA 465

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           +I+ LC+ G    AL +F+EM     + G+V  P   +Y+++I G  K      A  LF 
Sbjct: 466 VIDALCQVGRVFEALEMFDEMK----QKGIV--PEQYSYNSLISGFLKADRFGDALELFK 519

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
            M      P+  T+   I+    + +  +A + +  M  +G+ P VV  N ++  L K+ 
Sbjct: 520 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 579

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++  A R+   +   GV P+  TY  ++       K + A ++F  M    C  D ++ N
Sbjct: 580 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 639

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+   K    +EA  ++ ++    ++PT  TYNTL  GL    +V+  + L +EM   
Sbjct: 640 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 699

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
               +  TY T +D LCKNG + +A+++  ++    C  D+ +YN +I GL K  R   A
Sbjct: 700 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 759

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA----RDLFL 511
           + +FC +   VL+P+  T   ++      G M +A    +D FL
Sbjct: 760 FSIFCQMKK-VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 802



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 180/350 (51%), Gaps = 6/350 (1%)

Query: 137  LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
            LIK L  + + +EA  L  K K+FG       YN+LI GL       IA  LF EM    
Sbjct: 851  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMK--- 907

Query: 197  GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
             E+G  C P+  TY+ ++D + K   +++   +  +M  +      VTYN++I GL  + 
Sbjct: 908  -ELG--CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR 964

Query: 257  DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
               +A  L+  +M QG  P+  T+  ++D L K  ++++A  L + M++ G + N   YN
Sbjct: 965  RLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYN 1024

Query: 317  TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
             L++G  + G   +   LF  M   G   D  SY I+I+  CK  ++ + L+ +R+++  
Sbjct: 1025 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM 1084

Query: 377  GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
            G++P ++TYN L  GL +  ++E A+ LF+EMQ+ G+  +  TY + I  L K G   EA
Sbjct: 1085 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1144

Query: 437  VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
             +++  L     + ++  YN LI G   SG    A+  +  +  G  +PN
Sbjct: 1145 GKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 197/438 (44%), Gaps = 46/438 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIG-----------VVCKPNTVTYSTIIDGLCKEGFVDKA 226
           R   T  + N   E+  G+G +G            + K N  T++ I  GL  EG +  A
Sbjct: 210 RVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSA 269

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 MK+  I  +  TYN L++ L  +    EA  ++  MM  GV PSV T++V+M  
Sbjct: 270 PVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVA 329

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K R ++    LL  M   GV+PN  +Y   +       + + A  +   ME+ GCK D
Sbjct: 330 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 389

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            +++ +LI   C    + +A  ++ +M     KP  VTY TL     +    +  +++++
Sbjct: 390 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 449

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M+ DG   +   YT  ID LC+ G + EA+E+F  ++      +  +YN LI G  K+ 
Sbjct: 450 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 509

Query: 467 RLKFAWELFCSL------PHGV-----------------------------LVPNVVTYN 491
           R   A ELF  +      P+G                              +VP+VV  N
Sbjct: 510 RFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 569

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++ GL   G++  A+ +F +++    +PD IT+ M+I    + ++  +  ++ + M E 
Sbjct: 570 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 629

Query: 552 KVMPDASIVSIVVDLLVK 569
             +PD   V+ ++D L K
Sbjct: 630 NCVPDVLAVNSLIDTLYK 647



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 3/342 (0%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           L+ G     D  E   +F  M  Q V+ +V TF  I   L     +  A   L +M + G
Sbjct: 224 LMRGHGRVGDMAE---VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 280

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
           +  NA TYN L+      G    A E++  M   G      +Y++L+  + K ++VE  L
Sbjct: 281 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
            L REM + G+KP V +Y      L +  + + A ++  +M+ +G   D  T+T  I  L
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C  G I +A ++F  ++    + D   Y  L+D    +G  +   E++ ++       NV
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
           V Y  +I  LC  G++ +A ++F +M++    P+  +++ LI GF++ +      EL   
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520

Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
           M      P+     + ++   K+  S+K++  + + + +G V
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 562



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/346 (21%), Positives = 146/346 (42%), Gaps = 36/346 (10%)

Query: 248 LIHGLCHANDWNEA-KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           +IH L  A+   EA +R         V  +  + N +++ +  + ++ + + + D+M ++
Sbjct: 185 VIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 244

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
            V+ N  T+  +  G  + G +  A      M+  G         I++N Y         
Sbjct: 245 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG---------IVLNAY--------- 286

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
                            TYN L   L +      AL+++  M  DGV    RTY+  +  
Sbjct: 287 -----------------TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVA 329

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
             K   +   + L R +     + ++ +Y   I  L ++ R   A+ +   + +    P+
Sbjct: 330 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPD 389

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
           V+T+ ++IQ LC+ G++  A+D+F  M+++   PD +T+  L+  F    +   V E+ +
Sbjct: 390 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWN 449

Query: 547 KMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
            MK      +    + V+D L +     ++L  F   +++G V E 
Sbjct: 450 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQ 495



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 68/148 (45%), Gaps = 12/148 (8%)

Query: 65   PPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P + S+ I++ +L K         Y  +L   GL P+L TYN+LI+   K  R+      
Sbjct: 1053 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1112

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  + +    PN  T+NSLI  L    +  EA  ++ +L   G +PNV TYN LI G   
Sbjct: 1113 FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1172

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPN 206
            +G T  A   +  M  G       C PN
Sbjct: 1173 SGSTDSAYAAYGRMIVGG------CLPN 1194


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 254/508 (50%), Gaps = 26/508 (5%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +++ A G+ P+++  N+LI+ FCK+GR+S    A   +     + +  T+N++I GL   
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSF---AISLLRNRVISIDTVTYNTVISGLCEH 174

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC- 203
               EA    +++   G  P+ ++YNTLI+G C+ G+ + A  L +E++  N     +  
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILL 234

Query: 204 ---------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
                                 P+ VT+S+II+ LCK G V +   L  +M++ ++ P+ 
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 294

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTY +L+  L  AN +  A  L+ +M+ +G+   +V + V+MD L K   + EA +   +
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           +++    PN  TY  L+DG C  G ++ AE +   M       + V+Y+ +INGY K   
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +EEA+SL R+M  + + P   TY T+  GLF+  + E A++L  EM+  GV  +      
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            ++ L + G I E   L + +      LD   Y  LID   K G  + A      +    
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           +  +VV+YN++I G+   G++  A   +  M E    PD+ TF+++++   +  +   + 
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +L  KMK   + P     +IVV +L +N
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCEN 621



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 252/586 (43%), Gaps = 85/586 (14%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR--------LNATGLFPNLYTYN 100
           + FC     +R       +S  N++  ++  + +Y+          +  +G  P++ T++
Sbjct: 204 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFS 263

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +IN  CK G+V  G +    +      PN  T+ +L+  L   +    A AL++++   
Sbjct: 264 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 323

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   +++ Y  L++GL + G    A   F+ +   N        PN VTY+ ++DGLCK 
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV------PNVVTYTALVDGLCKA 377

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +  A+ +  QM ++++ P+VVTY+S+I+G        EA  L  +M DQ V P+  T+
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437

Query: 281 NVIMDELCKNRK-----------------------------------MDEASRLLDLMVQ 305
             ++D L K  K                                   + E   L+  MV 
Sbjct: 438 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +GV  +   Y +L+D F   G    A      M+  G   D VSYN+LI+G  K  +V  
Sbjct: 498 KGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGA 557

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
             + Y+ M  KGI+P + T+N +     +    E  LKL+D+M+  G+     +    + 
Sbjct: 558 DWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 616

Query: 426 GLCKNGYIIEAVELFRTLRILKC-----------------------------------EL 450
            LC+NG + EA+ +   + +++                                    +L
Sbjct: 617 MLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKL 676

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
             Q YN LI  LCK G  K A  +   +     +P+ VT+N ++ G      + KA   +
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             M E   +P+V T++ +I G        +V++ L +MK + + PD
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 222/483 (45%), Gaps = 36/483 (7%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           T++    + PN+ TY+ +IN + K G +        ++      PN  T+ ++I GL   
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA---------NG 195
            +   A  L  +++  G E N    + L+N L R G       L ++M          N 
Sbjct: 448 GKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 507

Query: 196 NGEIGVVCKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
              I V  K                     + V+Y+ +I G+ K G V  A   +  M++
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMRE 566

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + I PD+ T+N +++      D     +L+ +M   G++PS+++ N+++  LC+N KM+E
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM---GCKHDDVSYNI 352
           A  +L+ M+   + PN  TY   +D      K  RA+ +F + E++   G K     YN 
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI   CK    ++A  +  +M ++G  P  VT+N+L  G F    V  AL  +  M   G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           ++ +  TY T I GL   G I E  +    ++      D   YN LI G  K G +K + 
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            ++C +    LVP   TYN++I    N G+M +AR+L  +M +   +P+  T+  +I G 
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863

Query: 533 IRI 535
            ++
Sbjct: 864 CKL 866



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 211/443 (47%), Gaps = 19/443 (4%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P++  +NSLI   +    + +  +L ++K+ A G  P+V   N LI+  C+ G    A++
Sbjct: 91  PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L             V   +TVTY+T+I GLC+ G  D+A     +M    I PD V+YN+
Sbjct: 151 LLRNR---------VISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 201

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI G C   ++  AK L    +D+  + +++T  +++        ++EA R    MV  G
Sbjct: 202 LIDGFCKVGNFVRAKAL----VDEISELNLITHTILLSSYYNLHAIEEAYR---DMVMSG 254

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+  T++++++  C  GK+     L   ME M    + V+Y  L++   K      AL
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +LY +MV +GI   +V Y  L  GLF+   +  A K F  +  D    +  TYT  +DGL
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374

Query: 428 CKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           CK G +  A E   T  + K  + ++  Y+ +I+G  K G L+ A  L   +    +VPN
Sbjct: 375 CKAGDLSSA-EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
             TY  +I GL   G+ + A +L  +M       +    D L++   RI    +V  L+ 
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            M  K V  D    + ++D+  K
Sbjct: 494 DMVSKGVTLDQINYTSLIDVFFK 516



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 231/509 (45%), Gaps = 38/509 (7%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+ TY  L++  CK G +S       ++L     PN  T++S+I G   +  + EA +L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------ANGNGE 198
             K++     PN  TY T+I+GL + G   +A+ L +EM                N    
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481

Query: 199 IG-----------VVCKPNT---VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           IG           +V K  T   + Y+++ID   K G  + A A   +M++  +  DVV+
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541

Query: 245 YNSLIHGLCH----ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           YN LI G+        DW      +  M ++G++P + TFN++M+   K    +   +L 
Sbjct: 542 YNVLISGMLKFGKVGADWA-----YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M   G++P+  + N ++   C  GK+  A  +   M  M    +  +Y I ++   K+
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K  +     +  ++S GIK +   YNTL   L ++   + A  +  +M+  G   DT T+
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 716

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            + + G     ++ +A+  +  +       ++  YN +I GL  +G +K   +    +  
Sbjct: 717 NSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS 776

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+  TYN +I G    G M  +  ++ +M  +   P   T+++LI  F  + +  +
Sbjct: 777 RGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQ 836

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             ELL +M ++ V P+ S    ++  L K
Sbjct: 837 ARELLKEMGKRGVSPNTSTYCTMISGLCK 865



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 17/276 (6%)

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
           R     ++TL   +    ++  A     +M + G   D   +N LI+ +  N  V + +S
Sbjct: 55  RVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVS 114

Query: 369 L-YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           L Y +M++ G+ P V   N L     ++ ++  A+ L   ++   ++ DT TY T I GL
Sbjct: 115 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGL 171

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C++G   EA +    +  +    D  +YN LIDG CK G    A  L   +       N+
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNL 227

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE---L 544
           +T+ I++    N   +++A   + DM  +   PDV+TF  +I+   R+ +  KV E   L
Sbjct: 228 ITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIIN---RLCKGGKVLEGGLL 281

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           L +M+E  V P+    + +VD L K  I   +L  +
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 11/194 (5%)

Query: 364 EEALSLYREMVSKGIKPTVV-TYNTLFLGLFEIH----QVEHALKLFDEMQRDGVAADTR 418
           E +LS+ +      + P     Y +LF  LF ++    ++  A +    M   GV  D+R
Sbjct: 35  ETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSR 94

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFC 476
            + + I     NG + + V L  + +++ C +  D+ A N LI   CK GRL FA  L  
Sbjct: 95  LWNSLIHQFNVNGLVHDQVSLIYS-KMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-- 151

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            L + V+  + VTYN +I GLC  G  D+A     +M +    PD ++++ LI GF ++ 
Sbjct: 152 -LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210

Query: 537 EPSKVNELLHKMKE 550
              +   L+ ++ E
Sbjct: 211 NFVRAKALVDEISE 224


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 254/508 (50%), Gaps = 26/508 (5%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           +++ A G+ P+++  N+LI+ FCK+GR+S    A   +     + +  T+N++I GL   
Sbjct: 120 SKMIACGVSPDVFALNVLIHSFCKVGRLSF---AISLLRNRVISIDTVTYNTVISGLCEH 176

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC- 203
               EA    +++   G  P+ ++YNTLI+G C+ G+ + A  L +E++  N     +  
Sbjct: 177 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILL 236

Query: 204 ---------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
                                 P+ VT+S+II+ LCK G V +   L  +M++ ++ P+ 
Sbjct: 237 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 296

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           VTY +L+  L  AN +  A  L+ +M+ +G+   +V + V+MD L K   + EA +   +
Sbjct: 297 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 356

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
           +++    PN  TY  L+DG C  G ++ AE +   M       + V+Y+ +INGY K   
Sbjct: 357 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 416

Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
           +EEA+SL R+M  + + P   TY T+  GLF+  + E A++L  EM+  GV  +      
Sbjct: 417 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 476

Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
            ++ L + G I E   L + +      LD   Y  LID   K G  + A      +    
Sbjct: 477 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 536

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           +  +VV+YN++I G+   G++  A   +  M E    PD+ TF+++++   +  +   + 
Sbjct: 537 MPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 595

Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +L  KMK   + P     +IVV +L +N
Sbjct: 596 KLWDKMKSCGIKPSLMSCNIVVGMLCEN 623



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 252/586 (43%), Gaps = 85/586 (14%)

Query: 49  EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTR--------LNATGLFPNLYTYN 100
           + FC     +R       +S  N++  ++  + +Y+          +  +G  P++ T++
Sbjct: 206 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFS 265

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +IN  CK G+V  G +    +      PN  T+ +L+  L   +    A AL++++   
Sbjct: 266 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 325

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G   +++ Y  L++GL + G    A   F+ +   N        PN VTY+ ++DGLCK 
Sbjct: 326 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV------PNVVTYTALVDGLCKA 379

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G +  A+ +  QM ++++ P+VVTY+S+I+G        EA  L  +M DQ V P+  T+
Sbjct: 380 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 439

Query: 281 NVIMDELCKNRK-----------------------------------MDEASRLLDLMVQ 305
             ++D L K  K                                   + E   L+  MV 
Sbjct: 440 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 499

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
           +GV  +   Y +L+D F   G    A      M+  G   D VSYN+LI+G  K  +V  
Sbjct: 500 KGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGA 559

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
             + Y+ M  KGI+P + T+N +     +    E  LKL+D+M+  G+     +    + 
Sbjct: 560 DWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 618

Query: 426 GLCKNGYIIEAVELFRTLRILKC-----------------------------------EL 450
            LC+NG + EA+ +   + +++                                    +L
Sbjct: 619 MLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKL 678

Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
             Q YN LI  LCK G  K A  +   +     +P+ VT+N ++ G      + KA   +
Sbjct: 679 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 738

Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
             M E   +P+V T++ +I G        +V++ L +MK + + PD
Sbjct: 739 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 784



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 222/483 (45%), Gaps = 36/483 (7%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           T++    + PN+ TY+ +IN + K G +        ++      PN  T+ ++I GL   
Sbjct: 390 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 449

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA---------NG 195
            +   A  L  +++  G E N    + L+N L R G       L ++M          N 
Sbjct: 450 GKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 509

Query: 196 NGEIGVVCKP--------------------NTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
              I V  K                     + V+Y+ +I G+ K G V  A   +  M++
Sbjct: 510 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMRE 568

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           + I PD+ T+N +++      D     +L+ +M   G++PS+++ N+++  LC+N KM+E
Sbjct: 569 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 628

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM---GCKHDDVSYNI 352
           A  +L+ M+   + PN  TY   +D      K  RA+ +F + E++   G K     YN 
Sbjct: 629 AIHILNQMMLMEIHPNLTTYRIFLD---TSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 685

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           LI   CK    ++A  +  +M ++G  P  VT+N+L  G F    V  AL  +  M   G
Sbjct: 686 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 745

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           ++ +  TY T I GL   G I E  +    ++      D   YN LI G  K G +K + 
Sbjct: 746 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 805

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            ++C +    LVP   TYN++I    N G+M +AR+L  +M +   +P+  T+  +I G 
Sbjct: 806 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 865

Query: 533 IRI 535
            ++
Sbjct: 866 CKL 868



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 211/443 (47%), Gaps = 19/443 (4%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
           P++  +NSLI   +    + +  +L ++K+ A G  P+V   N LI+  C+ G    A++
Sbjct: 93  PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 152

Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
           L             V   +TVTY+T+I GLC+ G  D+A     +M    I PD V+YN+
Sbjct: 153 LLRNR---------VISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 203

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
           LI G C   ++  AK L    +D+  + +++T  +++        ++EA R    MV  G
Sbjct: 204 LIDGFCKVGNFVRAKAL----VDEISELNLITHTILLSSYYNLHAIEEAYR---DMVMSG 256

Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
             P+  T++++++  C  GK+     L   ME M    + V+Y  L++   K      AL
Sbjct: 257 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 316

Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           +LY +MV +GI   +V Y  L  GLF+   +  A K F  +  D    +  TYT  +DGL
Sbjct: 317 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 376

Query: 428 CKNGYIIEAVELFRTLRILKCEL-DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           CK G +  A E   T  + K  + ++  Y+ +I+G  K G L+ A  L   +    +VPN
Sbjct: 377 CKAGDLSSA-EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 435

Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
             TY  +I GL   G+ + A +L  +M       +    D L++   RI    +V  L+ 
Sbjct: 436 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 495

Query: 547 KMKEKKVMPDASIVSIVVDLLVK 569
            M  K V  D    + ++D+  K
Sbjct: 496 DMVSKGVTLDQINYTSLIDVFFK 518



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 231/509 (45%), Gaps = 38/509 (7%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           PN+ TY  L++  CK G +S       ++L     PN  T++S+I G   +  + EA +L
Sbjct: 364 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 423

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM---------------ANGNGE 198
             K++     PN  TY T+I+GL + G   +A+ L +EM                N    
Sbjct: 424 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 483

Query: 199 IG-----------VVCKPNT---VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
           IG           +V K  T   + Y+++ID   K G  + A A   +M++  +  DVV+
Sbjct: 484 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 543

Query: 245 YNSLIHGLCH----ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           YN LI G+        DW      +  M ++G++P + TFN++M+   K    +   +L 
Sbjct: 544 YNVLISGMLKFGKVGADWA-----YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 598

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           D M   G++P+  + N ++   C  GK+  A  +   M  M    +  +Y I ++   K+
Sbjct: 599 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 658

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
           K  +     +  ++S GIK +   YNTL   L ++   + A  +  +M+  G   DT T+
Sbjct: 659 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 718

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            + + G     ++ +A+  +  +       ++  YN +I GL  +G +K   +    +  
Sbjct: 719 NSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS 778

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+  TYN +I G    G M  +  ++ +M  +   P   T+++LI  F  + +  +
Sbjct: 779 RGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQ 838

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVK 569
             ELL +M ++ V P+ S    ++  L K
Sbjct: 839 ARELLKEMGKRGVSPNTSTYCTMISGLCK 867



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 17/276 (6%)

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
           R     ++TL   +    ++  A     +M + G   D   +N LI+ +  N  V + +S
Sbjct: 57  RVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVS 116

Query: 369 L-YREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
           L Y +M++ G+ P V   N L     ++ ++  A+ L   ++   ++ DT TY T I GL
Sbjct: 117 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGL 173

Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
           C++G   EA +    +  +    D  +YN LIDG CK G    A  L   +       N+
Sbjct: 174 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE----LNL 229

Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE---L 544
           +T+ I++    N   +++A   + DM  +   PDV+TF  +I+   R+ +  KV E   L
Sbjct: 230 ITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIIN---RLCKGGKVLEGGLL 283

Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
           L +M+E  V P+    + +VD L K  I   +L  +
Sbjct: 284 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 319



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 11/194 (5%)

Query: 364 EEALSLYREMVSKGIKPTVV-TYNTLFLGLFEIH----QVEHALKLFDEMQRDGVAADTR 418
           E +LS+ +      + P     Y +LF  LF ++    ++  A +    M   GV  D+R
Sbjct: 37  ETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSR 96

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFC 476
            + + I     NG + + V L  + +++ C +  D+ A N LI   CK GRL FA  L  
Sbjct: 97  LWNSLIHQFNVNGLVHDQVSLIYS-KMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-- 153

Query: 477 SLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN 536
            L + V+  + VTYN +I GLC  G  D+A     +M +    PD ++++ LI GF ++ 
Sbjct: 154 -LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 212

Query: 537 EPSKVNELLHKMKE 550
              +   L+ ++ E
Sbjct: 213 NFVRAKALVDEISE 226


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 187/332 (56%), Gaps = 17/332 (5%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+  TF +L+ GL  E R+++A AL  ++   G +P    Y T+INGLC+ G T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M   +       K + V Y+ IID LCK+G    A+ LF +M D+ I PDV+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I   C +  W +A++L  +M+++ + P VVTF+ +++ L K  K+ EA  +   M++RG+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P   TYN+++DGFC   ++N A+ +  SM S  C  D V+++ LINGYCK K V+  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++ EM  +GI    VTY TL  G  ++  ++ A  L + M   GVA +  T+ + +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 429 KNGYIIEAVELFRTL-------RILKCELDIQ 453
               + +A  +   L       RI++ +  IQ
Sbjct: 298 SKKELRKAFAILEDLQKSEVCPRIVQAKFKIQ 329



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 176/324 (54%), Gaps = 10/324 (3%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           TG  P++ T+  L+N  C  GRV        R++     P     N L K    ES    
Sbjct: 4   TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTES---- 59

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L +K++    + +V+ YN +I+ LC+ GH + A NLF EM +     G+   P+ +T
Sbjct: 60  ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK----GIF--PDVIT 113

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +ID  C+ G    A+ L   M +  INPDVVT+++LI+ L      +EA+ ++ +M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P+ +T+N ++D  CK  ++++A R+LD M  +   P+  T++TL++G+C   +++
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
              E+F  M   G   + V+Y  LI+G+C+  +++ A  L   M+S G+ P  +T+ ++ 
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293

Query: 390 LGLFEIHQVEHALKLFDEMQRDGV 413
             L    ++  A  + +++Q+  V
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEV 317



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 169/321 (52%), Gaps = 4/321 (1%)

Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           C+P+ VT++T+++GLC EG V +A AL  +M +E   P    Y ++I+GLC   D   A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            L  +M +  ++  VV +N I+D LCK+     A  L   M  +G+ P+  TY+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G+   AE+L   M       D V+++ LIN   K  +V EA  +Y +M+ +GI PT 
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           +TYN++  G  +  ++  A ++ D M     + D  T++T I+G CK   +   +E+F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +       +   Y  LI G C+ G L  A +L   +    + PN +T+  M+  LC+  +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 503 MDKARDLFLDMEENAAAPDVI 523
           + KA  +  D++++   P ++
Sbjct: 302 LRKAFAILEDLQKSEVCPRIV 322



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 166/323 (51%), Gaps = 4/323 (1%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M +    PDVVT+ +L++GLC      +A  L   M+++G QP    +  I++ LCK   
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            + A  LL  M +  ++ +   YN ++D  C  G    A+ LF  M   G   D ++Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I+ +C++    +A  L R+M+ + I P VVT++ L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +   T TY + IDG CK   + +A  +  ++    C  D+  ++ LI+G CK+ R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           E+FC +    +V N VTY  +I G C  G +D A+DL   M  +  AP+ ITF  ++   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 533 IRINEPSKVNELLHKMKEKKVMP 555
               E  K   +L  +++ +V P
Sbjct: 297 CSKKELRKAFAILEDLQKSEVCP 319



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 147/285 (51%), Gaps = 6/285 (2%)

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           Y  +IN  CK+G          ++  +    +   +N++I  L  +   + A  LFT++ 
Sbjct: 44  YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
             G  P+VITY+ +I+  CR+G    A  L  +M      I     P+ VT+S +I+ L 
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM------IERQINPDVVTFSALINALV 157

Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
           KEG V +A+ ++  M    I P  +TYNS+I G C  +  N+AKR+   M  +   P VV
Sbjct: 158 KEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217

Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
           TF+ +++  CK +++D    +   M +RG+  N  TY TL+ GFC +G ++ A++L   M
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277

Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
            S G   + +++  ++   C  KE+ +A ++  ++    + P +V
Sbjct: 278 ISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 151/306 (49%), Gaps = 5/306 (1%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++ G +P VVTF  +M+ LC   ++ +A  L+D MV+ G +P    Y T+++G C MG 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A  L   ME    K   V YN +I+  CK+     A +L+ EM  KGI P V+TY+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +        +   A +L  +M    +  D  T++  I+ L K G + EA E++  +    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
                  YN +IDG CK  RL  A  +  S+      P+VVT++ +I G C   ++D   
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDL 566
           ++F +M       + +T+  LIHGF ++ +     +LL+ M    V P+  +  S++  L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 567 LVKNEI 572
             K E+
Sbjct: 297 CSKKEL 302



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 130/247 (52%), Gaps = 12/247 (4%)

Query: 70  FNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
           +N ++  L K+ H+       T ++  G+FP++ TY+ +I+ FC+ GR +        ++
Sbjct: 79  YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
                P+  TF++LI  L  E ++ EA  ++  +   G  P  ITYN++I+G C+     
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198

Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
            A  + + MA+ +      C P+ VT+ST+I+G CK   VD    +F +M    I  + V
Sbjct: 199 DAKRMLDSMASKS------CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 252

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           TY +LIHG C   D + A+ L   M+  GV P+ +TF  ++  LC  +++ +A  +L+ +
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312

Query: 304 VQRGVRP 310
            +  V P
Sbjct: 313 QKSEVCP 319



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 4/255 (1%)

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   GC+ D V++  L+NG C    V +AL+L   MV +G +P    Y T+  GL ++  
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E AL L  +M+   + A    Y   ID LCK+G+ I A  LF  +       D+  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +ID  C+SGR   A +L   +    + P+VVT++ +I  L  +G++ +A +++ DM    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             P  IT++ +I GF + +  +    +L  M  K   PD    S +++   K +     +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 578 PSFLVQERQGEVGES 592
             F    R+G V  +
Sbjct: 237 EIFCEMHRRGIVANT 251



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 6/185 (3%)

Query: 94  PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
           P++ T++ LIN   K G+VS     +G +LR    P   T+NS+I G   + R+ +A  +
Sbjct: 144 PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM 203

Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
              + +  C P+V+T++TLING C+       + +F EM       G+V   NTVTY+T+
Sbjct: 204 LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR----GIV--ANTVTYTTL 257

Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           I G C+ G +D A+ L   M    + P+ +T+ S++  LC   +  +A  +  ++    V
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEV 317

Query: 274 QPSVV 278
            P +V
Sbjct: 318 CPRIV 322



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
           N+A  + D M     SP  V +F+ L+    K K  D        ++  G+  N  TY  
Sbjct: 198 NDAKRMLDSMASKSCSPD-VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           LI+ FC++G +         ++ S   PN  TF S++  L ++  + +A A+   L+   
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316

Query: 162 CEPNVI 167
             P ++
Sbjct: 317 VCPRIV 322


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 257/541 (47%), Gaps = 23/541 (4%)

Query: 65  PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V SFN +++S  K       K +   +   GL P++Y++NILIN  C +G ++     
Sbjct: 239 PSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 298

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
              + +    P++ T+N L+KG H    I  A  +   +   G  P+VITY  L+ G C+
Sbjct: 299 ASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ 358

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G+  + L L ++M +   E+      + + YS ++ GLCK G VD+A +LF  ++   +
Sbjct: 359 LGNIDMGLILLKDMLSRGFEL-----KSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGL 413

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            PD+V Y+ +IHGLC    ++ A R++ EM  + + P+  T   IM  LC+   + EA  
Sbjct: 414 TPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARS 473

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           LLD ++  G   +   YN ++DG+   G I  A ELF      G   +  ++N LI GYC
Sbjct: 474 LLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYC 533

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K + + EA  +   +   G+ P+VV+Y TL         ++   +L  EM+ +G+     
Sbjct: 534 KTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNV 593

Query: 419 TYTTFIDGLCKNGYIIEAVELFR---------TLRILKCE---LDIQAYNCLIDGLCKSG 466
           TY+    GLC+   +    ++ R          LR ++ E    D   YN +I  LC+  
Sbjct: 594 TYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVK 653

Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
            L  A+ELF  +    L P   TYNI+I  LC  G + KA      +++   +     + 
Sbjct: 654 HLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYT 713

Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
            +I       +P     L +++ ++         S V++ L +  ++++S   F +   +
Sbjct: 714 TVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSR 773

Query: 587 G 587
           G
Sbjct: 774 G 774



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 245/515 (47%), Gaps = 35/515 (6%)

Query: 61  HPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSL 114
           H   P   ++NIL      L  ++        +   GL P++ TY IL+   C++G + +
Sbjct: 305 HGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDM 364

Query: 115 GFIAFGRILRSCFTPNAAT-FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
           G I    +L   F   +   ++ ++ GL    R+ EA +LF  L+A+G  P+++ Y+ +I
Sbjct: 365 GLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVI 424

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           +GLC+ G   +A+ +++EM            PN+ T   I+ GLC++G + +A++L   +
Sbjct: 425 HGLCKLGKFDMAVRVYDEMCYKR------ILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
                  D++ YN +I G   +    EA  LF   ++ G+ P+V TFN ++   CK + +
Sbjct: 479 ISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNI 538

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
            EA ++LD++   G+ P+  +Y TLMD +   G I   EEL   M++ G    +V+Y+++
Sbjct: 539 AEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598

Query: 354 INGYCKNKEVEEALSLYRE------------MVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
             G C+  ++E    + RE            M S+GI P  +TYNT+   L  +  +  A
Sbjct: 599 FKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRA 658

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
            +LF +M+   +   + TY   ID LC  G I +A     +L+     L   AY  +I  
Sbjct: 659 FELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKA 718

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
            C  G  + A  LF  L       ++  Y+ +I  LC      +++  F  M     +PD
Sbjct: 719 HCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
           +   +++I          K +ELL    +  ++PD
Sbjct: 779 LDICEVMI----------KSDELLSWTIKWGLLPD 803



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 212/402 (52%), Gaps = 7/402 (1%)

Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
           + N  TY+T+++GLCR      A+ LF   +    +IG    P+ V++++I+   CK GF
Sbjct: 203 DKNEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWK-DIG----PSVVSFNSIMSSYCKLGF 256

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           VD AK+ F  +    + P V ++N LI+GLC      EA  L  +M   GV+P  VT+N+
Sbjct: 257 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 316

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
           ++        +  A  ++  M+ +G+ P+  TY  L+ G C +G I+    L   M S G
Sbjct: 317 LVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRG 376

Query: 343 CKHDD-VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
            +    + Y+++++G CK   V+EALSL+ ++ + G+ P +V Y+ +  GL ++ + + A
Sbjct: 377 FELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMA 436

Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
           ++++DEM    +  ++RT    + GLC+ G ++EA  L  +L      LDI  YN +IDG
Sbjct: 437 VRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDG 496

Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
             KSG ++ A ELF       + PNV T+N +I G C    + +AR +   ++     P 
Sbjct: 497 YAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPS 556

Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           V+++  L+  +        + EL  +MK + + P     S++
Sbjct: 557 VVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIH----------------------------GLCH 254
           VD++  +  +MKD N+N    +YNS+++                            GLC 
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDKNEHTYSTVVDGLCR 218

Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
                +A         + + PSVV+FN IM   CK   +D A      +++ G+ P+  +
Sbjct: 219 QQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYS 278

Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
           +N L++G CL+G I  A EL   M   G + D V+YNIL+ G+     +  A  + ++M+
Sbjct: 279 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDML 338

Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT-YTTFIDGLCKNGYI 433
            KG+ P V+TY  L  G  ++  ++  L L  +M   G    +   Y+  + GLCK G +
Sbjct: 339 DKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRV 398

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA+ LF  L       D+ AY+ +I GLCK G+   A  ++  + +  ++PN  T   +
Sbjct: 399 DEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAI 458

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           + GLC  G + +AR L   +  +    D+I ++++I G+ +     +  EL     E  +
Sbjct: 459 MLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGI 518

Query: 554 MPDAS 558
            P+ +
Sbjct: 519 TPNVA 523



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 29/303 (9%)

Query: 291 RKMDEASRLLDLMVQRGVR----------------------------PNACTYNTLMDGF 322
           R +DE+  +L  M  R +                              N  TY+T++DG 
Sbjct: 157 RMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDKNEHTYSTVVDGL 216

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C   K+  A     + E        VS+N +++ YCK   V+ A S +  ++  G+ P+V
Sbjct: 217 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSV 276

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
            ++N L  GL  +  +  AL+L  +M + GV  D+ TY   + G    G I  A E+ + 
Sbjct: 277 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQD 336

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS-LPHGVLVPNVVTYNIMIQGLCNDG 501
           +       D+  Y  L+ G C+ G +     L    L  G  + +++ Y++M+ GLC  G
Sbjct: 337 MLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTG 396

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++D+A  LF D+E     PD++ + ++IHG  ++ +      +  +M  K+++P++  + 
Sbjct: 397 RVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLG 456

Query: 562 IVV 564
            ++
Sbjct: 457 AIM 459


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 234/485 (48%), Gaps = 6/485 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+  N YTYN L+    K G        +  ++     P+  T++ L+        
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +     L  +++A G +PNV +Y   I  L +      A  +  EM N        CKP+
Sbjct: 290 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG------CKPD 343

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            +T++ +I  LC  G +  AK +F +MK  +  PD VTY +L+       +      ++ 
Sbjct: 344 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWN 403

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M   G   +VV +  ++D LC+  ++ EA  + D M Q+G+ P   +YN+L+ GF    
Sbjct: 404 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 463

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +   A ELF  M+  G K +  ++ + IN Y K+ E  +A+  Y  M SKGI P VV  N
Sbjct: 464 RFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 523

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL +  ++  A ++F E++  GV+ DT TYT  I    K     EAV++F  +   
Sbjct: 524 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 583

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  D+   N LID L K+GR   AW++F  L    L P   TYN ++ GL  +G++ + 
Sbjct: 584 NCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEV 643

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
             L  +M  +   P++IT++ ++    +    +   ++L+ M  K  +PD S  + V+  
Sbjct: 644 MHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 703

Query: 567 LVKNE 571
           LVK E
Sbjct: 704 LVKEE 708



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 244/512 (47%), Gaps = 14/512 (2%)

Query: 65   PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
            P V + N +L  LAK+      K     L A G+ P+  TY ++I C  K  +       
Sbjct: 517  PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 576

Query: 119  FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            F  ++ +   P+    NSLI  L+   R  EA  +F +LK    EP   TYNTL+ GL R
Sbjct: 577  FYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGR 636

Query: 179  TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             G     ++L EEM + N        PN +TY+TI+D LCK G V+ A  +   M  +  
Sbjct: 637  EGKVKEVMHLLEEMYHSN------YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 690

Query: 239  NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
             PD+ +YN++I+GL     +NEA  +F +M  + + P   T   I+    K   M EA  
Sbjct: 691  IPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALH 749

Query: 299  LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
            ++ +  +Q G + +  + ++LM+G        ++ E    + S G   DD     LI   
Sbjct: 750  IIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHL 809

Query: 358  CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
            CK K+  EA  L ++  S G+     +YN+L  GL + + ++ A  LF EM+  G   D 
Sbjct: 810  CKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 869

Query: 418  RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             TY   +D + K+  I E +++   +     E     YN +I GL KS RL+ A +L+ +
Sbjct: 870  FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 929

Query: 478  LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
            L      P   TY  ++ GL   G+++ A +LF +M E     +   +++L++G      
Sbjct: 930  LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 989

Query: 538  PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
              KV  L   M ++ + PD    +I++D L K
Sbjct: 990  TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1021



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 259/552 (46%), Gaps = 40/552 (7%)

Query: 48   NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNI 101
            +EA+ IF Y L+     P   ++N LLA L +        H    +  +   PNL TYN 
Sbjct: 606  DEAWQIF-YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 664

Query: 102  LINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
            +++C CK G V+    + +    + C  P+ +++N++I GL  E R  EA ++F ++K  
Sbjct: 665  ILDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV 723

Query: 161  GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI-----------GVVCKPNT-- 207
               P+  T  T++    + G    AL++ +E     G             G++ K  T  
Sbjct: 724  -LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEK 782

Query: 208  -VTYSTIIDG----------------LCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
             + ++ II                  LCK+    +A  L  + K   ++    +YNSLI 
Sbjct: 783  SIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLIC 842

Query: 251  GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
            GL   N  + A+ LF EM + G  P   T+N+++D + K+ +++E  ++ + M ++G   
Sbjct: 843  GLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 902

Query: 311  NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
               TYNT++ G     ++ +A +L+ ++ S G      +Y  L++G  K   +E+A +L+
Sbjct: 903  TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLF 962

Query: 371  REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
             EM+  G K     YN L  G       E    LF +M   G+  D ++YT  ID LCK 
Sbjct: 963  NEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1022

Query: 431  GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
            G + + +  FR L  +  E D+  YN LIDGL KS RL+ A  LF  +    +VPN+ TY
Sbjct: 1023 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1082

Query: 491  NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
            N +I  L   G+  +A  ++ ++      P+V T++ LI G+              +M  
Sbjct: 1083 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIV 1142

Query: 551  KKVMPDASIVSI 562
               +P++S   I
Sbjct: 1143 GGCLPNSSTCHI 1154



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 249/555 (44%), Gaps = 18/555 (3%)

Query: 3   LESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITP--NEAFCIFDYMLRM 60
           LE CC       S P S      S  L   R    R G   V  P  +E     D +  +
Sbjct: 84  LEVCCCSGVLGGSPPSSRTAGVSSPGLSASRPSKRRIGRARVQPPPRDERRAAEDVIHAL 143

Query: 61  HPSPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
             +  P  +     ++  + +   T  +           N +++     GRV      F 
Sbjct: 144 RSADGPAEALERFRSAARRPRVVHTTASC----------NYMLDLMRDHGRVGDMAEVFD 193

Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
            + R     N  TF ++  GL  E  +  A      +K  G   N  TYN L+  L ++G
Sbjct: 194 VMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG 253

Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
               AL +++ M       GVV  P+  TYS ++    K   V+    L  +M+   + P
Sbjct: 254 FDREALEVYKVMMVD----GVV--PSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKP 307

Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
           +V +Y   I  L  A  ++EA R+  EM ++G +P V+T  V++  LC   ++ +A  + 
Sbjct: 308 NVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVF 367

Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
             M +   +P+  TY TL+D F   G+     E++ +M++ G   + V+Y  +I+  C+ 
Sbjct: 368 WKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 427

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             V EAL ++ EM  KGI P   +YN+L  G  +  +   AL+LF  M   G   +  T+
Sbjct: 428 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTH 487

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
             FI+   K+G  I+A++ +  ++      D+ A N ++ GL KSGRL  A  +F  L  
Sbjct: 488 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKA 547

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+ +TY +MI+      + D+A  +F DM EN   PDV+  + LI    +     +
Sbjct: 548 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDE 607

Query: 541 VNELLHKMKEKKVMP 555
             ++ +++KE  + P
Sbjct: 608 AWQIFYQLKEMNLEP 622



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 199/438 (45%), Gaps = 46/438 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIG-----------VVCKPNTVTYSTIIDGLCKEGFVDKA 226
           R  HT  + N   ++   +G +G            + K N  T++ I  GL  EG +  A
Sbjct: 164 RVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSA 223

Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
                 MK+  I  +  TYN L++ L  +    EA  ++  MM  GV PSV T++V+M  
Sbjct: 224 PVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVA 283

Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
             K R ++    LL  M   GV+PN  +Y   +       + + A  +   ME+ GCK D
Sbjct: 284 FGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPD 343

Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
            +++ +LI   C    + +A  ++ +M     KP  VTY TL     +  + +  +++++
Sbjct: 344 VITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWN 403

Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
            M+ DG   +   YT  ID LC+ G + EA+E+F  ++      +  +YN LI G  K+ 
Sbjct: 404 AMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKAD 463

Query: 467 RLKFAWELFCSL------PHGV-----------------------------LVPNVVTYN 491
           R   A ELF  +      P+G                              +VP+VV  N
Sbjct: 464 RFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGN 523

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            ++ GL   G++  A+ +F +++    +PD IT+ M+I    + ++  +  ++ + M E 
Sbjct: 524 AVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIEN 583

Query: 552 KVMPDASIVSIVVDLLVK 569
             +PD  +V+ ++D L K
Sbjct: 584 NCVPDVLVVNSLIDTLYK 601



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 154/326 (47%)

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           +F  M  Q V+ +V TF  I   L     +  A   L +M + G+  NA TYN L+    
Sbjct: 191 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 250

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G    A E++  M   G      +Y++L+  + K ++VE  L L REM + G+KP V 
Sbjct: 251 KSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVY 310

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +Y      L +  + + A ++  EM+ +G   D  T+T  I  LC  G I +A ++F  +
Sbjct: 311 SYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 370

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
           +    + D   Y  L+D    +G  +   E++ ++       NVV Y  +I  LC  G++
Sbjct: 371 KKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 430

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            +A ++F +M++    P+  +++ LI GF++ +      EL   M      P+     + 
Sbjct: 431 FEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLF 490

Query: 564 VDLLVKNEISLKSLPSFLVQERQGEV 589
           ++   K+  S+K++  + + + +G V
Sbjct: 491 INYYGKSGESIKAIQRYELMKSKGIV 516



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 42/349 (12%)

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVV----TFNVIMDELCKNRKMDEASRLLDLM 303
           +IH L  A+   EA   F        +P VV    + N ++D +  + ++ + + + D+M
Sbjct: 139 VIHALRSADGPAEALERF---RSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVM 195

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
            ++ V+ N  T+  +  G  + G +  A      M+  G   +  +YN L+    K+   
Sbjct: 196 QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD 255

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
            EAL +Y+ M+  G+ P+V TY+ L +   +   VE  L L  EM+  GV  +  +YT  
Sbjct: 256 REALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYT-- 313

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
              +C              +R+L                 ++ R   A+ +   + +   
Sbjct: 314 ---IC--------------IRVLG----------------QARRFDEAYRILAEMENEGC 340

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
            P+V+T+ ++IQ LC+ G++  A+D+F  M+++   PD +T+  L+  F    E   V E
Sbjct: 341 KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVME 400

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
           + + MK      +    + V+D L +     ++L  F   +++G V E 
Sbjct: 401 IWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQ 449


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 201/383 (52%), Gaps = 12/383 (3%)

Query: 67  VSSFNILLASLAKNK--------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           + SFN  L  +A++         +   R  A  + P+L TY+ILI C C+ GR+ LGF A
Sbjct: 58  IYSFNRTLTDVARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAA 117

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL-FTKLKAFGCEPNVITYNTLINGLC 177
            G +++  F   A TF  L+KGL A+ R  +A  +   ++    C P+V +   L+ GLC
Sbjct: 118 LGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLC 177

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
               +  AL L   MA+   + G    P+ V+Y+T+I+G  KEG  DKA + + +M D  
Sbjct: 178 DENRSQEALELLHMMAD---DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR 234

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I+P+VVTY+S+I  LC A   ++A  +   M+  GV P  +T+N I+   C + +  EA 
Sbjct: 235 ISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 294

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
             L  M   GV PN  TY +LM+  C  G+   A ++F SM   G + D  +Y  L+ GY
Sbjct: 295 GTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGY 354

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
                + E  +L   MV  GI+P    +N L     +  +V+ A+ +F +M++ G+  + 
Sbjct: 355 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 414

Query: 418 RTYTTFIDGLCKNGYIIEAVELF 440
             Y T ID LCK+G + +A+  F
Sbjct: 415 VCYGTVIDVLCKSGSVDDAMLYF 437



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 21/368 (5%)

Query: 150 AAALFTKLKAFGCE---PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           A +LF ++   G +   P++ TY+ LI   CR G     L+L      G   +G V K  
Sbjct: 76  AVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGR----LDL------GFAALGNVIKKG 125

Query: 207 ----TVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINPDVVTYNSLIHGLCHANDWNEA 261
                +T++ ++ GLC +     A  + L+ M + +  PDV +   L+ GLC  N   EA
Sbjct: 126 FRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEA 185

Query: 262 KRLFIEMMDQ---GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
             L   M D    G  P VV++  +++   K    D+A      M+ R + PN  TY+++
Sbjct: 186 LELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSI 245

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +   C    +++A E+  +M   G   D ++YN +++GYC + + +EA+   ++M S G+
Sbjct: 246 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 305

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +P VVTY +L   L +  +   A K+FD M + G+  D  TY T + G    G ++E   
Sbjct: 306 EPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 365

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           L   +     + D   +N LI    K  ++  A  +F  +    L PNVV Y  +I  LC
Sbjct: 366 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 425

Query: 499 NDGQMDKA 506
             G +D A
Sbjct: 426 KSGSVDDA 433



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 200/449 (44%), Gaps = 39/449 (8%)

Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
           R    P+A    +   G    S    A  +  +L   G   ++ ++N  +  + R     
Sbjct: 16  RGGGVPSAQGGTTQDLGRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARDSPA- 74

Query: 184 IALNLFEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
            A++LF  MA  G  E+     P+  TYS +I   C+ G +D   A    +  +    + 
Sbjct: 75  AAVSLFNRMARAGADEV----TPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEA 130

Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
           +T+  L+ GLC     ++A  + +  M +    P V +  +++  LC   +  EA  LL 
Sbjct: 131 ITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLH 190

Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
           +M                           A++  G     G   D VSY  +ING+ K  
Sbjct: 191 MM---------------------------ADDRGG-----GSPPDVVSYTTVINGFFKEG 218

Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
           + ++A S Y EM+ + I P VVTY+++   L +   ++ A+++ + M ++GV  D  TY 
Sbjct: 219 DSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 278

Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
           + + G C +G   EA+   + +R    E ++  Y  L++ LCK+GR   A ++F S+   
Sbjct: 279 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKR 338

Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
            L P++ TY  ++QG    G + +   L   M  N   PD   F++LI  + +  +  + 
Sbjct: 339 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 398

Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKN 570
             +  KM++  + P+      V+D+L K+
Sbjct: 399 MLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 154/334 (46%), Gaps = 7/334 (2%)

Query: 261 AKRLFIEMMDQG---VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
           A  LF  M   G   V P + T+++++   C+  ++D     L  ++++G R  A T+  
Sbjct: 76  AVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAP 135

Query: 318 LMDGFCLMGKINRAEEL-FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
           L+ G C   + + A ++    M  + C  D  S  IL+ G C     +EAL L   M   
Sbjct: 136 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 195

Query: 377 ---GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
              G  P VV+Y T+  G F+    + A   + EM    ++ +  TY++ I  LCK   +
Sbjct: 196 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAM 255

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            +A+E+  T+       D   YN ++ G C SG+ K A      +    + PNVVTY  +
Sbjct: 256 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSL 315

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           +  LC +G+  +AR +F  M +    PD+ T+  L+ G+       +++ LL  M    +
Sbjct: 316 MNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 375

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
            PD  + +I++    K E   +++  F    + G
Sbjct: 376 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 409


>gi|302758538|ref|XP_002962692.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
 gi|300169553|gb|EFJ36155.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
          Length = 495

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 256/491 (52%), Gaps = 14/491 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +    + P L TY +LI    +  RV   F  F  I    FT  A++++ ++ GL     
Sbjct: 9   MQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLAKYGY 68

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM-IALNLFEEMANGNGEIGVVCKP 205
             EA  LF ++      P + +   ++NG C+ G  M  A+ LF +M    GE G  C P
Sbjct: 69  FDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKM---EGEYG--CPP 123

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           NT  Y+ ++ GL K+  V++ + +FL+MK++   P++VTY + I GLC A   ++A  + 
Sbjct: 124 NTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDAMVVK 183

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
            EM+ +   P  V ++++++  CK  K+ E  +LL  M+++ ++P+   +++L+D     
Sbjct: 184 KEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKA 243

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK-PTVVT 384
           G+   A  LF  M   GCK D V  +++++ + K  EV +AL L  E V + +  P+  +
Sbjct: 244 GRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPSAGS 303

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            N L   +    +VE  ++L   M   G      +Y T +  LC+    +EA+EL + +R
Sbjct: 304 INQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELVKEMR 363

Query: 445 ILK-CELDIQAYNCLIDGLCKSGRLKFA---WELFCSLPHGVLVPNVVTYNIMIQGLCND 500
                 +D+   +C+I+ LCK   +  A   +E   S     L+P+V TYNI+++ LC +
Sbjct: 364 AAGYTSVDL---SCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLERLCGE 420

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
           G++  A+DLF +M E+   PDV ++++L+    +  +  + +EL  ++     +P + + 
Sbjct: 421 GRLGDAKDLFQEMIESGRIPDVNSYEILVEALCKAGKIFQGHELFKQLISLGFIPSSEMC 480

Query: 561 SIVVDLLVKNE 571
           + +VD L K++
Sbjct: 481 ATIVDGLCKHQ 491



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 52/484 (10%)

Query: 30  VHFRDLTTREGDINVITP--------NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK 81
           +H R  T +    + I          +EA  +F+ M+R   +PP  S   IL        
Sbjct: 44  IHARGFTAKASSYSYIVCGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGIL-------- 95

Query: 82  HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCF--TPNAATFNSLIK 139
                                 N +C+ G      I   R +   +   PN   +N L+ 
Sbjct: 96  ----------------------NGYCQDGGKMEQAIQLFRKMEGEYGCPPNTYAYNVLLT 133

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           GL  + R+ E   +F ++K  GCEPN++TY T I GLC+ G    A+ + +EM   +   
Sbjct: 134 GLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDAMVVKKEMIQKS--- 190

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
              C P+ V YS +I+  CK G + + + L  +M ++ + PDVV ++SL+  L  A  + 
Sbjct: 191 ---CSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYG 247

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR-PNACTYNTL 318
           +A RLF  MM+QG +P  V  +VI+D   K  ++ +A  L++  V R +  P+A + N L
Sbjct: 248 DAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPSAGSINQL 307

Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
           +    +  K+     L  +M S G +    SY  L+   C+ K   EAL L +EM + G 
Sbjct: 308 VKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELVKEMRAAGY 367

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEM---QRDGVAADTRTYTTFIDGLCKNGYIIE 435
             T V  + +   L ++  V+ A  L++EM   Q+  +     TY   ++ LC  G + +
Sbjct: 368 --TSVDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLERLCGEGRLGD 425

Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
           A +LF+ +       D+ +Y  L++ LCK+G++    ELF  L     +P+      ++ 
Sbjct: 426 AKDLFQEMIESGRIPDVNSYEILVEALCKAGKIFQGHELFKQLISLGFIPSSEMCATIVD 485

Query: 496 GLCN 499
           GLC 
Sbjct: 486 GLCK 489



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 201/467 (43%), Gaps = 59/467 (12%)

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           +A  +  +++     P + TY  LI GL R      A +LF+E+       G   K +  
Sbjct: 1   DAIGVLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHAR----GFTAKAS-- 54

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH-ANDWNEAKRLFIE 267
           +YS I+ GL K G+ D+A  LF +M    + P + +   +++G C       +A +LF +
Sbjct: 55  SYSYIVCGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRK 114

Query: 268 MMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           M  + G  P+   +NV++  L K  +++E   +   M ++G  PN  TY T + G C  G
Sbjct: 115 MEGEYGCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAG 174

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
           +++ A  +   M    C  D+V Y+ILIN +CK  ++ E   L  EM+ K ++P VV ++
Sbjct: 175 RVDDAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFS 234

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF------ 440
           +L   L +  +   A +LF  M   G   D    +  +D   K G + +A+EL       
Sbjct: 235 SLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDR 294

Query: 441 -----------------------------------RTLRILKCELDIQAYNCLIDGLCKS 465
                                              R  R L+C     +Y  L+  LC+ 
Sbjct: 295 DLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQC-----SYATLLRELCRR 349

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM---EENAAAPDV 522
                A EL   +         V  + +I+ LC    +D+AR L+ +M   ++    P V
Sbjct: 350 KNAVEALELVKEMRAAGYTS--VDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSV 407

Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            T+++L+             +L  +M E   +PD +   I+V+ L K
Sbjct: 408 STYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVNSYEILVEALCK 454



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 171/393 (43%), Gaps = 18/393 (4%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            +A  +F  M   +  PP   ++N+LL  L K    +        +   G  PNL TY  
Sbjct: 106 EQAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCT 165

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
            I   CK GRV    +    +++   +P+   ++ LI       +I E   L  ++    
Sbjct: 166 YILGLCKAGRVDDAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKK 225

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
            +P+V+ +++L++ L + G    A  LF  M          CKP+ V  S I+D   K G
Sbjct: 226 LQPDVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQG------CKPDAVIASVILDSFTKRG 279

Query: 222 FVDKAKALFLQMKDENIN-PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
            V +A  L  +  D ++  P   + N L+  +   +   +  RL   M  +G +P   ++
Sbjct: 280 EVAQALELVNEFVDRDLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSY 339

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
             ++ ELC+ +   EA  L+  M  R     +   + +++  C M  ++ A  L+  M+S
Sbjct: 340 ATLLRELCRRKNAVEALELVKEM--RAAGYTSVDLSCVIEMLCKMKMVDEARGLYEEMKS 397

Query: 341 MGCKH---DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
              +       +YNIL+   C    + +A  L++EM+  G  P V +Y  L   L +  +
Sbjct: 398 SQQQELLPSVSTYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVNSYEILVEALCKAGK 457

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
           +    +LF ++   G    +    T +DGLCK+
Sbjct: 458 IFQGHELFKQLISLGFIPSSEMCATIVDGLCKH 490



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 37/268 (13%)

Query: 65  PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V  F+ L+  L K   Y        R+   G  P+    +++++ F K G V+     
Sbjct: 228 PDVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALEL 287

Query: 119 FGRIL-RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               + R    P+A + N L+K +    ++ +   L   + + G  P   +Y TL+  LC
Sbjct: 288 VNEFVDRDLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELC 347

Query: 178 RTGHTMIALNLFEEM-ANGNGEIGVVCK-----------------------------PNT 207
           R  + + AL L +EM A G   + + C                              P+ 
Sbjct: 348 RRKNAVEALELVKEMRAAGYTSVDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSV 407

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
            TY+ +++ LC EG +  AK LF +M +    PDV +Y  L+  LC A    +   LF +
Sbjct: 408 STYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVNSYEILVEALCKAGKIFQGHELFKQ 467

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDE 295
           ++  G  PS      I+D LCK++  +E
Sbjct: 468 LISLGFIPSSEMCATIVDGLCKHQSREE 495


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 237/476 (49%), Gaps = 29/476 (6%)

Query: 62  PSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLG 115
           P+ P + + N +L  L K + +D        + + G+ P+L TYN L+N     G ++  
Sbjct: 120 PTLPALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKA 179

Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
           +  + +++     PN  T++++I  L  E  ++EA  LF  +K  G +PN+ TYN L++ 
Sbjct: 180 WEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSS 239

Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
            C+       L L++E+       G+V  PN V  +T+I G      +   K  FL+M  
Sbjct: 240 HCKRDGVNRTLTLYQELLKS----GLV--PNAVIITTLIGGFFLANRISDVKNAFLEMHR 293

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             I P V  YNSLI G   +    EA  ++ +M   G+ P   T ++I+  LC   ++  
Sbjct: 294 YGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQV 353

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A+R L+LM Q G+  NA  YN L+D  C  G +  A      M  +G + + V+Y+ LI+
Sbjct: 354 ATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLID 413

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+ K +++E A+ +Y EMV+KG++P V+TY  +  G  +   ++ A +L  EM   G+++
Sbjct: 414 GHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISS 473

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           +  T +  +DGLC+   + +AV         K   DI ++       C +    +  E  
Sbjct: 474 NAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSF-------CSN----YTTEED 522

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           CS      + N VTY  +I GL  DGQ  +A   F  M E+   PD  T+ +LI G
Sbjct: 523 CS------ILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRG 572



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 194/394 (49%), Gaps = 7/394 (1%)

Query: 180 GHTMIALNLFEEMANGNGEIGVVCK----PNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
           G  +IAL+   +M   +  + V C+    P     + I+DGL K    D+   LF +M  
Sbjct: 97  GVLVIALS---QMGLHDDALSVFCRLPTLPALPACNAILDGLVKARRFDRVWKLFDEMLS 153

Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
             + P +VTYN+L++   H  D  +A  ++ +M+ + + P+VVT++ ++  LC+   + E
Sbjct: 154 RGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIE 213

Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
           A RL  +M + GV+PN  TYN LM   C    +NR   L+  +   G   + V    LI 
Sbjct: 214 AERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIG 273

Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
           G+     + +  + + EM   GI PTV  YN+L  G F     + AL ++ +M R G+  
Sbjct: 274 GFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCP 333

Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
           D  T +  + GLC  G +  A      ++     L+  AYN LID  CK G L  A    
Sbjct: 334 DEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATC 393

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRI 535
             +    + PNVVTY+ +I G     +M+ A  ++++M      P+V+T+  +IHG  + 
Sbjct: 394 TRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKF 453

Query: 536 NEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
            +      L  +M EK +  +A  VS++VD L +
Sbjct: 454 GDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCR 487



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 180/373 (48%), Gaps = 26/373 (6%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +  TG+ PNLYTYN L++  CK   V+     +  +L+S   PNA    +LI G    +R
Sbjct: 221 MKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANR 280

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           I +    F ++  +G  P V  YN+LI+G  R+G+   AL ++++M      +G+   P+
Sbjct: 281 ISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMT----RVGLC--PD 334

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
             T S I+ GLC  G V  A      M+   IN +   YN+LI   C   +  EA     
Sbjct: 335 EFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCT 394

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
            M + G++P+VVT++ ++D   K RKM+ A  +   MV +GV PN  TY  ++ G    G
Sbjct: 395 RMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFG 454

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP------ 380
            ++ A  L   M   G   + ++ ++L++G C+   V++A+    +   +  KP      
Sbjct: 455 DLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQK-KPGDINSF 513

Query: 381 -------------TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
                          VTY TL  GL+   Q   A K F  M+   +  D+ TY+  I G 
Sbjct: 514 CSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQ 573

Query: 428 CKNGYIIEAVELF 440
           C  GY++ A+ L+
Sbjct: 574 CMLGYVLNAMMLY 586



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 221/478 (46%), Gaps = 67/478 (14%)

Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
           GLH +     A ++F +L      P +   N +++GL +         LF+EM +     
Sbjct: 107 GLHDD-----ALSVFCRLPTL---PALPACNAILDGLVKARRFDRVWKLFDEMLSR---- 154

Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
           G+V  P+ VTY+T+++    EG + KA  ++ QM    I+P+VVTY+++I  LC      
Sbjct: 155 GMV--PSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVI 212

Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
           EA+RLFI M + GVQP++ T+N +M   CK   ++    L   +++ G+ PNA    TL+
Sbjct: 213 EAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLI 272

Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
            GF L  +I+  +  F  M   G       YN LI+G  ++   +EAL++Y++M   G+ 
Sbjct: 273 GGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLC 332

Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
           P   T + +  GL    QV+ A +  + MQ+ G+  +   Y   ID  CK+G + EA+  
Sbjct: 333 PDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALAT 392

Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
              +  +  E ++  Y+ LIDG  K  +++ A  ++  +    + PNV+TY  MI G   
Sbjct: 393 CTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAK 452

Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRIN----------------EPSKVNE 543
            G +D A  L  +M E   + + IT  +L+ G  R +                +P  +N 
Sbjct: 453 FGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINS 512

Query: 544 L------------------------------LHK-------MKEKKVMPDASIVSIVV 564
                                           H+       M+E  ++PD+   S+++
Sbjct: 513 FCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLI 570


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 261/575 (45%), Gaps = 49/575 (8%)

Query: 22  RSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK 81
           R  FS+L++ + +     G ++      A  +F  +  MH   P   + N+LL  L K+ 
Sbjct: 130 REAFSALILAYAE----SGSLD-----RALQLFHTVREMHNCFPTFVASNLLLNGLVKSG 180

Query: 82  HYDTRL----------NATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNA 131
             D  L          + TG   + YT +I++   C +G++  G          C  P+ 
Sbjct: 181 KVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHV 240

Query: 132 ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE 191
             +N +I G   +  +  A     +LK  G  P V TY  LING C+ G       L  E
Sbjct: 241 VFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 300

Query: 192 MA---------------NGNGEIGVV--------------CKPNTVTYSTIIDGLCKEGF 222
           MA               +   + G+V              C P+  TY+ +I+  CK G 
Sbjct: 301 MAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGR 360

Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
           +++A  L  + K+  + P+  +Y  L+H  C   D+ +A  +   + + G +  +V++  
Sbjct: 361 IEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGA 420

Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
            +  +    ++D A  + + M+++GV P+A  YN LM G C  G+I   + L   M    
Sbjct: 421 FIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRN 480

Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
            + D   +  LI+G+ +N E++EA+ +++ ++ KG+ P +V YN +  G  +  ++  AL
Sbjct: 481 VQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDAL 540

Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
              +EM     A D  TY+T IDG  K   +  A+++F  +   K + ++  Y  LI+G 
Sbjct: 541 SCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGF 600

Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
           CK   +  A ++F  +    LVPNVVTY  ++ G    G+ ++A  +F  M  N   P+ 
Sbjct: 601 CKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPND 660

Query: 523 ITFDMLIHGFIRI-NEPSKVNELLHKMKEKKVMPD 556
            TF  LI+G       P  + E   K  E+ ++ D
Sbjct: 661 ATFHYLINGLTNTATSPVLIEEKDSKENERSLILD 695



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 215/438 (49%), Gaps = 20/438 (4%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+   G  P++ TYNI+IN  CK GR+        +       PN  ++  L+     + 
Sbjct: 335 RMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKG 394

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
             ++A+ +  ++   G + ++++Y   I+G+   G   +AL + E+M     E GV   P
Sbjct: 395 DYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMM----EKGVF--P 448

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
           +   Y+ ++ GLCK+G +   K L  +M D N+ PDV  + +LI G     + +EA ++F
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             ++ +GV P +V +N ++   CK  KM +A   L+ M      P+  TY+T++DG+   
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQ 568

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
             ++ A ++FG M     K + ++Y  LING+CK  ++  A  ++  M S  + P VVTY
Sbjct: 569 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTY 628

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNG---YIIEA------ 436
            TL  G F+  + E A  +F+ M  +G   +  T+   I+GL        +IE       
Sbjct: 629 TTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKEN 688

Query: 437 -----VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
                ++ F  + +   +  I AYN +I  LCK G +  A  L   +     + + V + 
Sbjct: 689 ERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFT 748

Query: 492 IMIQGLCNDGQMDKARDL 509
            ++ GLC+ G+  + R++
Sbjct: 749 ALLHGLCHKGKSKEWRNI 766



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 207/504 (41%), Gaps = 85/504 (16%)

Query: 130 NAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLF 189
           +    +SL+K L +     E   +   +KA   +P    ++ LI     +G    AL LF
Sbjct: 94  DGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLF 153

Query: 190 ---EEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM--KDENINPDVVT 244
               EM N        C P  V  + +++GL K G VD A  L+ +M   D+     V  
Sbjct: 154 HTVREMHN--------CFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDN 205

Query: 245 YNS--LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
           Y +  ++ GLC+     E +RL      +   P VV +N+I+D  CK   +  A+R L+ 
Sbjct: 206 YTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNE 265

Query: 303 MVQRGVRPNACTYNTLMDGFCLMGK----------------------------------- 327
           +  +GV P   TY  L++GFC  G+                                   
Sbjct: 266 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGL 325

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT------ 381
           +  A E+   M  MGC  D  +YNI+IN  CK   +EEA  L  +   +G+ P       
Sbjct: 326 VTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTP 385

Query: 382 -----------------------------VVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
                                        +V+Y     G+    +++ AL + ++M   G
Sbjct: 386 LMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKG 445

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           V  D + Y   + GLCK G I     L   +     + D+  +  LIDG  ++G L  A 
Sbjct: 446 VFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAI 505

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           ++F  +    + P +V YN MI+G C  G+M  A     +M     APD  T+  +I G+
Sbjct: 506 KIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGY 565

Query: 533 IRINEPSKVNELLHKMKEKKVMPD 556
           ++ ++ S   ++  +M + K  P+
Sbjct: 566 VKQHDMSSALKMFGQMMKHKFKPN 589



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 139/312 (44%), Gaps = 29/312 (9%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAK-NKHYDT-----RLNATGLFPNLYTYNI 101
           +EA  IF  ++R     P +  +N ++    K  K  D       +N+    P+ YTY+ 
Sbjct: 502 DEAIKIFKVIIR-KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYST 560

Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
           +I+ + K   +S     FG++++  F PN  T+ SLI G   ++ ++ A  +F+ +K+F 
Sbjct: 561 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFD 620

Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYSTIIDGLC-- 218
             PNV+TY TL+ G  + G    A ++FE M  NG       C PN  T+  +I+GL   
Sbjct: 621 LVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNG-------CLPNDATFHYLINGLTNT 673

Query: 219 ------------KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
                       KE         F  M  +  +  +  YNS+I  LC     + A+ L  
Sbjct: 674 ATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLT 733

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           +M+ +G     V F  ++  LC   K  E   ++   + +     A  Y+  +D +   G
Sbjct: 734 KMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQG 793

Query: 327 KINRAEELFGSM 338
           +++ A  +  ++
Sbjct: 794 RLSEASVILQTL 805



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 109/276 (39%), Gaps = 40/276 (14%)

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL---- 390
           + S     C  D V+++ L+      +   E   +   M ++ +KPT   ++ L L    
Sbjct: 83  WASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAE 142

Query: 391 --------------------------------GLFEIHQVEHALKLFDEMQR--DGVAAD 416
                                           GL +  +V+ AL+L+D+M +  DG  A 
Sbjct: 143 SGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAV 202

Query: 417 TRTYTT--FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
              YTT   + GLC  G I E   L +      C   +  YN +IDG CK G L+ A   
Sbjct: 203 VDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRA 262

Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
              L    ++P V TY  +I G C  G+ +    L  +M       +V  F+ +I    +
Sbjct: 263 LNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYK 322

Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
               ++  E+L +M E    PD +  +I+++   K 
Sbjct: 323 YGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKG 358


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 232/492 (47%), Gaps = 7/492 (1%)

Query: 85  TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
           T +   G+ PNL   N  I    K  ++        R+  +   P+  T+NSLIKG    
Sbjct: 255 TLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDL 314

Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK 204
           +RI +A  L   L + GC P+ ++Y T++  LC+         L E+M   +  I     
Sbjct: 315 NRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLI----- 369

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+ VTY+T+I  L K G  D A A   + +D+  + D V Y++++H  C     +EAK L
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 429

Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
            I+M  +   P VVT+  I+D  C+  ++DEA ++L  M + G +PN  +Y  L++G C 
Sbjct: 430 VIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCH 489

Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
            GK   A E+    E      + ++Y ++++G+ +  ++ EA  L REMV KG  PT V 
Sbjct: 490 SGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVE 549

Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
            N L   L +  +V  A K  +E    G A +   +TT I G C+ G +  A+ +   + 
Sbjct: 550 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMY 609

Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
           +     D   Y  L D L K GRL  A EL   +    L P  VT+  +I   C  G++D
Sbjct: 610 LSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVD 669

Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
              +L   M +    P    ++ +I          +  +LL K+       DA+   +++
Sbjct: 670 DMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLM 727

Query: 565 DLLVKNEISLKS 576
           +  +K  ++L +
Sbjct: 728 ESCLKKGVALSA 739



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 243/497 (48%), Gaps = 17/497 (3%)

Query: 77  LAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRV--SLGFIAFGRILRSCFTPNAATF 134
           L K   +  R+  TG+ P++ TYN LI  +C + R+  +L  IA G   + C  P+  ++
Sbjct: 282 LEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIA-GLPSKGC-PPDKVSY 339

Query: 135 NSLIKGLHAESRIMEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
            +++  L  E +I +   L  K+ +     P+ +TYNTLI+ L + GH   AL   +E  
Sbjct: 340 YTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAE 399

Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
           +    I      + V YS I+   C++G +D+AK+L + M   + NPDVVTY +++ G C
Sbjct: 400 DKGFHI------DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFC 453

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
                +EAK++  +M   G +P+ V++  +++ LC + K  EA  ++++  +    PNA 
Sbjct: 454 RLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI 513

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           TY  +M GF   GK++ A +L   M   G     V  N+LI   C+N++V EA     E 
Sbjct: 514 TYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC 573

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           ++KG    VV + T+  G  +I  +E AL + ++M       D  TYT   D L K G +
Sbjct: 574 LNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRL 633

Query: 434 IEAVELFRTLRILKCELDIQ--AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYN 491
            EA EL   +++L   LD     +  +I   C+ GR+     L   +      P    YN
Sbjct: 634 DEAAELI--VKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYN 689

Query: 492 IMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
            +I+ LC+ G +++A  L   +   A+  D  T  +L+   ++        ++  +M  +
Sbjct: 690 HVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRR 749

Query: 552 KVMPDASIVSIVVDLLV 568
            + PD  +   V   LV
Sbjct: 750 NLTPDLKLCEKVTKKLV 766



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 214/462 (46%), Gaps = 17/462 (3%)

Query: 64  PPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
           PP   S+  ++  L K K         +  +  + L P+  TYN LI+   K G      
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392

Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
                     F  +   +++++     + R+ EA +L   + +  C P+V+TY  +++G 
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452

Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           CR G    A  + ++M          CKPNTV+Y+ +++GLC  G   +A+ +    ++ 
Sbjct: 453 CRLGRIDEAKKMLQQMYKHG------CKPNTVSYTALLNGLCHSGKSLEAREMINVSEEH 506

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              P+ +TY  ++HG       +EA  L  EM+++G  P+ V  N+++  LC+N+K+ EA
Sbjct: 507 WWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEA 566

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
            + L+  + +G   N   + T++ GFC +G +  A  +   M       D V+Y  L + 
Sbjct: 567 KKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDA 626

Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAAD 416
             K   ++EA  L  +M+SKG+ PT VT+ ++     +  +V+  L L D M +      
Sbjct: 627 LGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK---RKP 683

Query: 417 TRT-YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
            RT Y   I+ LC  G + EA +L   +     +LD    + L++   K G    A+++ 
Sbjct: 684 FRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVA 743

Query: 476 CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           C +    L P++     + + L  DG + +A  L L   E  
Sbjct: 744 CQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERG 785



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 178/365 (48%), Gaps = 1/365 (0%)

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
           + Y T++D L K      A+ +   M    I      +  ++     A     A R+   
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M   GV+P++   N  +  L K  K+++A R L+ M   G++P+  TYN+L+ G+C + +
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG-IKPTVVTYN 386
           I  A EL   + S GC  D VSY  ++   CK K++E+   L  +MV    + P  VTYN
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
           TL   L +    + AL    E +  G   D   Y+  +   C+ G + EA  L   +   
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
            C  D+  Y  ++DG C+ GR+  A ++   +      PN V+Y  ++ GLC+ G+  +A
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
           R++    EE+   P+ IT+ +++HGF R  + S+  +L  +M EK   P    +++++  
Sbjct: 497 REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556

Query: 567 LVKNE 571
           L +N+
Sbjct: 557 LCQNQ 561



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 185/395 (46%), Gaps = 16/395 (4%)

Query: 52  CIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINC 105
           C+ + M++     P   ++N L+  L+K+ H D  L         G   +   Y+ +++ 
Sbjct: 357 CLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416

Query: 106 FCKIGRVSLG-FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
           FC+ GR+     +      RSC  P+  T+ +++ G     RI EA  +  ++   GC+P
Sbjct: 417 FCQKGRMDEAKSLVIDMYSRSC-NPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKP 475

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           N ++Y  L+NGLC +G ++ A     EM N + E      PN +TY  ++ G  +EG + 
Sbjct: 476 NTVSYTALLNGLCHSGKSLEA----REMINVSEEHWWT--PNAITYGVVMHGFRREGKLS 529

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
           +A  L  +M ++   P  V  N LI  LC      EAK+   E +++G   +VV F  ++
Sbjct: 530 EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVI 589

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              C+   M+ A  +L+ M      P+A TY  L D     G+++ A EL   M S G  
Sbjct: 590 HGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLD 649

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
              V++  +I+ YC+   V++ L+L   MV +  KP    YN +   L +   +E A KL
Sbjct: 650 PTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKL 707

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
             ++ R     D  T    ++   K G  + A ++
Sbjct: 708 LGKVLRTASKLDANTCHVLMESCLKKGVALSAYKV 742



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 142/311 (45%), Gaps = 3/311 (0%)

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           + +  ++D L K +    A R+L LM +RG+  +   +  +M  +   GK+  A  +   
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M+  G + +    N  I    K  ++E+AL     M   GIKP +VTYN+L  G  ++++
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAY 455
           +E AL+L   +   G   D  +Y T +  LCK   I E V+      +    L  D   Y
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI-EQVKCLMEKMVQDSNLIPDQVTY 375

Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           N LI  L K G    A              + V Y+ ++   C  G+MD+A+ L +DM  
Sbjct: 376 NTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYS 435

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
            +  PDV+T+  ++ GF R+    +  ++L +M +    P+    + +++ L  +  SL+
Sbjct: 436 RSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 495

Query: 576 SLPSFLVQERQ 586
           +     V E  
Sbjct: 496 AREMINVSEEH 506



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 1/221 (0%)

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
           H  + Y  L++   K K  + A  + R M  +GI+ +   +  + +      ++ +AL++
Sbjct: 194 HHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRV 253

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
              MQ+ GV  +     T I  L K   + +A+     +++   + DI  YN LI G C 
Sbjct: 254 LTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCD 313

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM-EENAAAPDVI 523
             R++ A EL   LP     P+ V+Y  ++  LC + ++++ + L   M +++   PD +
Sbjct: 314 LNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQV 373

Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           T++ LIH   +          L + ++K    D    S +V
Sbjct: 374 TYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIV 414



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 50/252 (19%)

Query: 64  PPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P PV   N+L+ SL +N      K Y       G   N+  +  +I+ FC+IG +     
Sbjct: 545 PTPVE-INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALS 603

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +  S   P+A T+ +L   L  + R+ EAA L  K+ + G +P  +T+ ++I+  C
Sbjct: 604 VLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYC 663

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF------- 230
           + G     LNL + M        V  KP    Y+ +I+ LC  G +++A+ L        
Sbjct: 664 QWGRVDDMLNLLDRM--------VKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTA 715

Query: 231 ----------------------------LQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
                                        QM   N+ PD+     +   L    +  EA 
Sbjct: 716 SKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEAD 775

Query: 263 RLFIEMMDQGVQ 274
           +L +  +++G+Q
Sbjct: 776 KLMLRFVERGIQ 787


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/561 (27%), Positives = 261/561 (46%), Gaps = 57/561 (10%)

Query: 51  FCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA--TGLFPNLYTYNILINCFCK 108
           F      LR  P      S  + L+S A    +D   +A   GL  +   +  L+     
Sbjct: 90  FSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSS 149

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            GR +    AF R+      P A  +N+++K L     I+ A AL+ ++ A GC PN  T
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++GLC+ G    AL +F+EM +     G++  PN   Y+ ++  LC  G +D+A  
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDR----GIM--PNVKIYTVLLSSLCNAGKIDEAVQ 263

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEA--------------------------- 261
           L   MKD+   PD VTYN+ + GLC     NEA                           
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323

Query: 262 -KRLFIE-------MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             R F E       M+++ + P VV + +++    +  ++++A   LD+M ++G  P+  
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF 383

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            YNT++   C  G + RA  L   M       D  +  I+I G CK   V+EA+ ++ EM
Sbjct: 384 CYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM 443

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ---------RDGVAA----DTRTY 420
              G  PTV+TYN L  G +   ++E A  LF +M+         R  + A    D+ + 
Sbjct: 444 GEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESL 503

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              +  +C++G +++A +L R++       D+  YN LI+GLCK+  L  A  LF  L  
Sbjct: 504 RKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQL 563

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+ +TY  +I GL    + + A  LF ++ ++ ++P +  ++ ++    R+ + S+
Sbjct: 564 KGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623

Query: 541 -VNELLHKMKEKKVMPDASIV 560
            +N  L  + +K   P  S V
Sbjct: 624 AINLWLDYLPKKYNFPVESEV 644



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 205/513 (39%), Gaps = 88/513 (17%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ A G  PN  TYN+L++  CK G        F  +L     PN   +  L+  L    
Sbjct: 197 RMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAG 256

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---GEIGVV 202
           +I EA  L   +K  GC P+ +TYN  ++GLC+ G    A      + +G    G  G  
Sbjct: 257 KIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYS 316

Query: 203 C--------------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C                           P+ V Y+ +I G  + G ++ A +    MK +
Sbjct: 317 CLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD   YN+++  LC   D   A  L  EM+   +     T  +++  LCK   +DEA
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME----------------- 339
            ++ D M + G  P   TYN L+DGF   G++  A  LF  ME                 
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ 496

Query: 340 -------------------------------SMGCKHDDVSYNILINGYCKNKEVEEALS 368
                                            G   D V+YN LING CK + ++ A+ 
Sbjct: 497 VRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVR 556

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L++E+  KGI P  +TY TL  GL   H+   A+ LF  + + G +     Y + +  LC
Sbjct: 557 LFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLC 616

Query: 429 KNGYIIEAVELFRTLRILKCELDIQ------AYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           +   + +A+ L+      K    ++      A+  + DG    G  +    +     +G 
Sbjct: 617 RMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVREL---IKIDQEYGS 673

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           +  N   Y I + GLC   + D A  +F  ++E
Sbjct: 674 ISSN--PYTIWLIGLCQVRRTDDALRIFHTLQE 704



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 246/585 (42%), Gaps = 112/585 (19%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            +A  +FD ML      P V  + +LL+SL      D        +   G  P+  TYN 
Sbjct: 224 GDALKMFDEMLD-RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 102 LINCFCKIGRVSLGF----------IAFGRILRSCF------------------------ 127
            ++  CK+GRV+  F           A G    SC                         
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 128 -TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            +P+   +  +I+G     RI +A +    +K  G  P+   YNT++  LC  G    A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L  EM   N  +      ++ T + +I GLCK G VD+A  +F +M +   +P V+TYN
Sbjct: 403 TLRSEMLQNNLVL------DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYN 456

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV--------------TFNVIMDELCKNRK 292
           +LI G        EA+ LF   M+ G  PS+               +   ++ ++C++ +
Sbjct: 457 ALIDGFYREGRLEEARMLF-HKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQ 515

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + +A +LL  ++  GV P+  TYNTL++G C    ++ A  LF  ++  G   D+++Y  
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF------- 405
           LI+G  +     +A+ L++ ++  G  P++  YN++   L  + ++  A+ L+       
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 406 ------------------DEMQRDGV-----------AADTRTYTTFIDGLCKNGYIIEA 436
                             D    DGV           +  +  YT ++ GLC+     +A
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDA 695

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQ 495
           + +F TL+    ++       LI+ LC    L  A ++   +L   +++   V  N +++
Sbjct: 696 LRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLR 754

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
            LC   +   A+ L   M        ++ +DM ++    + EP+K
Sbjct: 755 WLCICYRRQDAQALAWRMH-------LVGYDMDVY----LREPTK 788



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 3/319 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+  S   F  ++       +  +A +    M +   RP A  YNT++      G I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L+  M + GC  +  +YN+L++G CK     +AL ++ EM+ +GI P V  Y  L   
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    +++ A++L   M+  G   D  TY  F+ GLCK G + EA +    L+     L 
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           ++ Y+CLIDGL ++ R    +  + ++    + P+VV Y IMI+G    G+++ A     
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M++    PD   ++ ++       +  + + L  +M +  ++ D++  +I++  L K  
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 572 ISLKSLPSFLVQERQGEVG 590
           +  +++  F   +  GE G
Sbjct: 432 LVDEAMQIF---DEMGEHG 447


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/561 (27%), Positives = 261/561 (46%), Gaps = 57/561 (10%)

Query: 51  FCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA--TGLFPNLYTYNILINCFCK 108
           F      LR  P      S  + L+S A    +D   +A   GL  +   +  L+     
Sbjct: 90  FSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSS 149

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            GR +    AF R+      P A  +N+++K L     I+ A AL+ ++ A GC PN  T
Sbjct: 150 AGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++GLC+ G    AL +F+EM +     G++  PN   Y+ ++  LC  G +D+A  
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDR----GIM--PNVKIYTVLLSSLCNAGKIDEAVQ 263

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEA--------------------------- 261
           L   MKD+   PD VTYN+ + GLC     NEA                           
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323

Query: 262 -KRLFIE-------MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             R F E       M+++ + P VV + +++    +  ++++A   LD+M ++G  P+  
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF 383

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            YNT++   C  G + RA  L   M       D  +  I+I G CK   V+EA+ ++ EM
Sbjct: 384 CYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM 443

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ---------RDGVAA----DTRTY 420
              G  PTV+TYN L  G +   ++E A  LF +M+         R  + A    D+ + 
Sbjct: 444 GEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESL 503

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              +  +C++G +++A +L R++       D+  YN LI+GLCK+  L  A  LF  L  
Sbjct: 504 RKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQL 563

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+ +TY  +I GL    + + A  LF ++ ++ ++P +  ++ ++    R+ + S+
Sbjct: 564 KGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623

Query: 541 -VNELLHKMKEKKVMPDASIV 560
            +N  L  + +K   P  S V
Sbjct: 624 AINLWLDYLPKKYNFPVESEV 644



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 205/513 (39%), Gaps = 88/513 (17%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ A G  PN  TYN+L++  CK G        F  +L     PN   +  L+  L    
Sbjct: 197 RMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAG 256

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---GEIGVV 202
           +I EA  L   +K  GC P+ +TYN  ++GLC+ G    A      + +G    G  G  
Sbjct: 257 KIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYS 316

Query: 203 C--------------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C                           P+ V Y+ +I G  + G ++ A +    MK +
Sbjct: 317 CLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD   YN+++  LC   D   A  L  EM+   +     T  +++  LCK   +DEA
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME----------------- 339
            ++ D M + G  P   TYN L+DGF   G++  A  LF  ME                 
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ 496

Query: 340 -------------------------------SMGCKHDDVSYNILINGYCKNKEVEEALS 368
                                            G   D V+YN LING CK + ++ A+ 
Sbjct: 497 VCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVR 556

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L++E+  KGI P  +TY TL  GL   H+   A+ LF  + + G +     Y + +  LC
Sbjct: 557 LFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLC 616

Query: 429 KNGYIIEAVELFRTLRILKCELDIQ------AYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           +   + +A+ L+      K    ++      A+  + DG    G  +    +     +G 
Sbjct: 617 RMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVREL---IKIDQEYGY 673

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           +  N   Y I + GLC   + D A  +F  ++E
Sbjct: 674 ISSN--PYTIWLIGLCQVRRTDDALRIFHTLQE 704



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 247/585 (42%), Gaps = 112/585 (19%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            +A  +FD ML      P V  + +LL+SL      D        +   G  P+  TYN 
Sbjct: 224 GDALKMFDEMLD-RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 102 LINCFCKIGRVSLGF----------IAFGRILRSCF------------------------ 127
            ++  CK+GRV+  F           A G    SC                         
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 128 -TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            +P+   +  +I+G     RI +A +    +K  G  P+   YNT++  LC  G    A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L  EM   N  +      ++ T + +I GLCK G VD+A  +F +M +   +P V+TYN
Sbjct: 403 TLRSEMLQNNLVL------DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYN 456

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV--------------TFNVIMDELCKNRK 292
           +LI G        EA+ LF   M+ G  PS+               +   ++ ++C++ +
Sbjct: 457 ALIDGFYREGRLEEARMLF-HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + +A +LL  ++  GV P+  TYNTL++G C    ++ A  LF  ++  G   D+++Y  
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF------- 405
           LI+G  +     +A+ L++ ++  G  P++  YN++   L  + ++  A+ L+       
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 406 ----------------------DEMQRDGVAAD-------TRTYTTFIDGLCKNGYIIEA 436
                                 D+  R+ +  D       +  YT ++ GLC+     +A
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDA 695

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQ 495
           + +F TL+    ++       LI+ LC    L  A ++   +L   +++   V  N +++
Sbjct: 696 LRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLR 754

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
            LC   +   A+ L   M        ++ +DM ++    + EP+K
Sbjct: 755 WLCICYRRQDAQALAWRMH-------LVGYDMDVY----LREPTK 788



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 3/319 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+  S   F  ++       +  +A +    M +   RP A  YNT++      G I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L+  M + GC  +  +YN+L++G CK     +AL ++ EM+ +GI P V  Y  L   
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    +++ A++L   M+  G   D  TY  F+ GLCK G + EA +    L+     L 
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           ++ Y+CLIDGL ++ R    +  + ++    + P+VV Y IMI+G    G+++ A     
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M++    PD   ++ ++       +  + + L  +M +  ++ D++  +I++  L K  
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 572 ISLKSLPSFLVQERQGEVG 590
           +  +++  F   +  GE G
Sbjct: 432 LVDEAMQIF---DEMGEHG 447


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/561 (27%), Positives = 261/561 (46%), Gaps = 57/561 (10%)

Query: 51  FCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA--TGLFPNLYTYNILINCFCK 108
           F      LR  P      S  + L+S A    +D   +A   GL  +   +  L+     
Sbjct: 90  FSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSS 149

Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
            GR +    AF R+      P A  +N+++K L     I+ A AL+ ++ A GC PN  T
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
           YN L++GLC+ G    AL +F+EM +     G++  PN   Y+ ++  LC  G +D+A  
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDR----GIM--PNVKIYTVLLSSLCNAGKIDEAVQ 263

Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEA--------------------------- 261
           L   MKD+   PD VTYN+ + GLC     NEA                           
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLF 323

Query: 262 -KRLFIE-------MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
             R F E       M+++ + P VV + +++    +  ++++A   LD+M ++G  P+  
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF 383

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
            YNT++   C  G + RA  L   M       D  +  I+I G CK   V+EA+ ++ EM
Sbjct: 384 CYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM 443

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ---------RDGVAA----DTRTY 420
              G  PTV+TYN L  G +   ++E A  LF +M+         R  + A    D+ + 
Sbjct: 444 GEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESL 503

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
              +  +C++G +++A +L R++       D+  YN LI+GLCK+  L  A  LF  L  
Sbjct: 504 RKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQL 563

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + P+ +TY  +I GL    + + A  LF ++ ++ ++P +  ++ ++    R+ + S+
Sbjct: 564 KGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623

Query: 541 -VNELLHKMKEKKVMPDASIV 560
            +N  L  + +K   P  S V
Sbjct: 624 AINLWLDYLPKKYNFPVESEV 644



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 205/513 (39%), Gaps = 88/513 (17%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ A G  PN  TYN+L++  CK G        F  +L     PN   +  L+  L    
Sbjct: 197 RMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAG 256

Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN---GEIGVV 202
           +I EA  L   +K  GC P+ +TYN  ++GLC+ G    A      + +G    G  G  
Sbjct: 257 KIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYS 316

Query: 203 C--------------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE 236
           C                           P+ V Y+ +I G  + G ++ A +    MK +
Sbjct: 317 CLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
              PD   YN+++  LC   D   A  L  EM+   +     T  +++  LCK   +DEA
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436

Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME----------------- 339
            ++ D M + G  P   TYN L+DGF   G++  A  LF  ME                 
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ 496

Query: 340 -------------------------------SMGCKHDDVSYNILINGYCKNKEVEEALS 368
                                            G   D V+YN LING CK + ++ A+ 
Sbjct: 497 VCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVR 556

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           L++E+  KGI P  +TY TL  GL   H+   A+ LF  + + G +     Y + +  LC
Sbjct: 557 LFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLC 616

Query: 429 KNGYIIEAVELFRTLRILKCELDIQ------AYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
           +   + +A+ L+      K    ++      A+  + DG    G  +    +     +G 
Sbjct: 617 RMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVREL---IKIDQEYGY 673

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
           +  N   Y I + GLC   + D A  +F  ++E
Sbjct: 674 ISSN--PYTIWLIGLCQVRRTDDALRIFHTLQE 704



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 247/585 (42%), Gaps = 112/585 (19%)

Query: 48  NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
            +A  +FD ML      P V  + +LL+SL      D        +   G  P+  TYN 
Sbjct: 224 GDALKMFDEMLD-RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282

Query: 102 LINCFCKIGRVSLGF----------IAFGRILRSCF------------------------ 127
            ++  CK+GRV+  F           A G    SC                         
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 128 -TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIAL 186
            +P+   +  +I+G     RI +A +    +K  G  P+   YNT++  LC  G    A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 187 NLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYN 246
            L  EM   N  +      ++ T + +I GLCK G VD+A  +F +M +   +P V+TYN
Sbjct: 403 TLRSEMLQNNLVL------DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYN 456

Query: 247 SLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV--------------TFNVIMDELCKNRK 292
           +LI G        EA+ LF   M+ G  PS+               +   ++ ++C++ +
Sbjct: 457 ALIDGFYREGRLEEARMLF-HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
           + +A +LL  ++  GV P+  TYNTL++G C    ++ A  LF  ++  G   D+++Y  
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF------- 405
           LI+G  +     +A+ L++ ++  G  P++  YN++   L  + ++  A+ L+       
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 406 ----------------------DEMQRDGVAAD-------TRTYTTFIDGLCKNGYIIEA 436
                                 D+  R+ +  D       +  YT ++ GLC+     +A
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDA 695

Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFC-SLPHGVLVPNVVTYNIMIQ 495
           + +F TL+    ++       LI+ LC    L  A ++   +L   +++   V  N +++
Sbjct: 696 LRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVG-NRLLR 754

Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
            LC   +   A+ L   M        ++ +DM ++    + EP+K
Sbjct: 755 WLCICYRRQDAQALAWRMH-------LVGYDMDVY----LREPTK 788



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 3/319 (0%)

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G+  S   F  ++       +  +A +    M +   RP A  YNT++      G I  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
             L+  M + GC  +  +YN+L++G CK     +AL ++ EM+ +GI P V  Y  L   
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    +++ A++L   M+  G   D  TY  F+ GLCK G + EA +    L+     L 
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           ++ Y+CLIDGL ++ R    +  + ++    + P+VV Y IMI+G    G+++ A     
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M++    PD   ++ ++       +  + + L  +M +  ++ D++  +I++  L K  
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 572 ISLKSLPSFLVQERQGEVG 590
           +  +++  F   +  GE G
Sbjct: 432 LVDEAMQIF---DEMGEHG 447


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 248/538 (46%), Gaps = 72/538 (13%)

Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
           + ++ F   G  +       R+ RS  TP+ +   +L++ L     +  A  +F ++ A 
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213

Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
           G  P++ T+N +I G C  G   +A  L   M    GE G+V  PN  +Y+ +I G C  
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLLGIM----GEFGIV--PNVCSYNILIKGHCVF 267

Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
           G+   A  LF +M      P VVTYN L+  LCH     EA+RLF EM   G+Q + +TF
Sbjct: 268 GWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITF 327

Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG---FCLMGKINRAEELFGS 337
           NV++D   K  +MD+A      M  RG+ P++CT+N +  G   F    ++    ++FGS
Sbjct: 328 NVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGS 387

Query: 338 -MESMG-----------CKHDDV-----------------SYNILINGYCKNKEVEEALS 368
            M + G           C+ DD                   +N LI  Y K    EEA  
Sbjct: 388 HMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFE 447

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQV-------EH--------------------- 400
           LYR M   G+ P+  T+N L +GL    ++       EH                     
Sbjct: 448 LYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFR 507

Query: 401 ------ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
                 ALK +D+M + G+  D   ++ +I+GLC+  Y+ EA + F  +       +   
Sbjct: 508 EGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFT 567

Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
           YN +I  LC++G +  A +L  ++    LVP++ T NI+I GLC +G+++   +L LDM 
Sbjct: 568 YNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMC 627

Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
            N   PD +T++ +I+ + R  + +     ++KM      PD    +I +  L  N +
Sbjct: 628 SNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHM 685



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 241/512 (47%), Gaps = 41/512 (8%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           + A G  P+L T+N +I  FC  G V +     G +      PN  ++N LIKG      
Sbjct: 210 MAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGW 269

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
             +A  LF ++   GCEP V+TYN L++ LC  G    A  LF+EMA    ++G+  + N
Sbjct: 270 SRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMA----QVGI--QAN 323

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG---------LCHAND 257
           T+T++ +IDG  K G +D+A A + +MK   + PD  T+N +  G         L H +D
Sbjct: 324 TITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHD 383

Query: 258 -------------------WN----EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
                              W+    +A  L    ++QG   SV  FN ++    K    +
Sbjct: 384 MFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHE 443

Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNIL 353
           EA  L  +M + G+ P++ T+N L+ G C  G+++ A+ L   M S G C     S+ I 
Sbjct: 444 EAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCL--STSFTIC 501

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           ++   +      AL  + +M   G++P  + ++    GL  +  V  A + F EM   G+
Sbjct: 502 LDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGI 561

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             +  TY + I  LC+ G + EA++L + +R      DI   N LIDGLC+ G+L+    
Sbjct: 562 VPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDN 621

Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
           L   +    L P+ VTYN +I   C    M+ A +    M      PD+ T+++ +H   
Sbjct: 622 LLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLC 681

Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
             +  ++  ++L ++      PD+   + ++D
Sbjct: 682 SNHMLNQAGKVLDELVAMGCPPDSVTYNTLMD 713



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 226/503 (44%), Gaps = 75/503 (14%)

Query: 132 ATFNSLIKGLHA---ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           A + +L   LHA        EA  + T+++  G  P++     L+  L R+G    A N+
Sbjct: 147 ARYGALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNV 206

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
           FEEMA   G      +P+  T++ +I G C  G V  A  L   M +  I P+V +YN L
Sbjct: 207 FEEMA-ARGP-----RPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNIL 260

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I G C      +A +LF EM   G +P+VVT+N+++D LC   +M EA RL D M Q G+
Sbjct: 261 IKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGI 320

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING------------ 356
           + N  T+N L+DG+   G++++A   +  M++ G   D  ++NI+  G            
Sbjct: 321 QANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVH 380

Query: 357 --------------------YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
                                C +  +++A  L R  + +G   +V  +N L     +  
Sbjct: 381 DHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEG 440

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL----------------- 439
             E A +L+  M + G+A  + T+   I GLC  G + EA  L                 
Sbjct: 441 LHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTI 500

Query: 440 -----FR---TLRILKC---------ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
                FR    +  LKC         + D  A++  I+GLC+   +  A++ F  +    
Sbjct: 501 CLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARG 560

Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
           +VPN  TYN +I  LC  G M +A  L  +M +N   PD+ T ++LI G  R  +   V+
Sbjct: 561 IVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVD 620

Query: 543 ELLHKMKEKKVMPDASIVSIVVD 565
            LL  M    + PD    + +++
Sbjct: 621 NLLLDMCSNGLTPDTVTYNTIIN 643



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/532 (26%), Positives = 243/532 (45%), Gaps = 36/532 (6%)

Query: 65  PPVSSFNILLA-------SLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           P V S+NIL+        S    K ++  ++ +G  P + TYNIL++  C  GR+     
Sbjct: 252 PNVCSYNILIKGHCVFGWSRDAFKLFE-EMHRSGCEPTVVTYNILVDVLCHEGRMPEARR 310

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
            F  + +     N  TFN LI G     R+ +A A + ++KA G  P+  T+N +  G  
Sbjct: 311 LFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAY 370

Query: 178 RTGHTMIAL---NLFEEMANGNGEIGVVCK----------------------PNTVT-YS 211
           + GH    +   ++F      +G   +VC+                      P +VT ++
Sbjct: 371 KFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFN 430

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
            +I    KEG  ++A  L+  M    + P   T+N LI GLC+    +EA+ L   M+ +
Sbjct: 431 ALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 490

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
           G   S  +F + +D   +      A +  D M + G++P+   ++  ++G C +  +N A
Sbjct: 491 GYCLST-SFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEA 549

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            + F  M + G   ++ +YN +I+  C+   + EAL L + M   G+ P + T N L  G
Sbjct: 550 YQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDG 609

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
           L    ++E    L  +M  +G+  DT TY T I+  C+   +  A+     +    CE D
Sbjct: 610 LCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPD 669

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN  +  LC +  L  A ++   L      P+ VTYN ++ G+C+D  +D+A  L  
Sbjct: 670 IFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSD-VLDRAMILTG 728

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
            + + A  P+ IT ++ +  F +     +      K++E   + D +  +I+
Sbjct: 729 RLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDATRNII 780


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 249/513 (48%), Gaps = 16/513 (3%)

Query: 61  HPS-PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVS 113
           HP     V  FN+L+    +N            +   G  P++ TYN L+N FCKIG + 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                 G I      PN  T+ +LI        + +A  ++ ++      P+V+TY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           NGLC++G    A ++F EM     E+GVV  PN  +Y+T+ID L KEG V +A  L  +M
Sbjct: 130 NGLCKSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRM 183

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               I  DVV Y +L+ GL  A   N A+ +F  ++++ + P+ VT++ ++D  CK   +
Sbjct: 184 VVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDV 243

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           ++   LL  M ++ + PN   Y++++DG+   G +N A ++   M       +   Y  L
Sbjct: 244 NKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+GY K  +   AL L++EM S+G++      ++    L    ++E A +LF +M   G+
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   YT+ +DG  K G   +A  + + +       D+ AYN LI+GL K G  K+  E
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG--KYESE 421

Query: 474 LF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            F   +    L P+  T+N MI   C +G +  A  L  +M+     P+ IT ++L+   
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
               E  K  +LL+ M      P  +    V+D
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 229/470 (48%), Gaps = 44/470 (9%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           FN LI G      I  A  L   +K  G  P+++TYNTL+NG C+ G    A  L     
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM---- 75

Query: 194 NGNGEIGVV-CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              GEI +V  +PN +TY+T+ID  CK   ++ A  ++ +M  +++ PDVVTY  +++GL
Sbjct: 76  ---GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR--- 309
           C +    EAK +F EM + GV P+  ++  ++D L K   + EA  L   MV RG+    
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 310 --------------------------------PNACTYNTLMDGFCLMGKINRAEELFGS 337
                                           PN  TY+ L+DG C +G +N+ E L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME      + + Y+ +++GY K   + EA+ + R+MV + I P V  Y TL  G F+  Q
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
              AL LF EM+  G+  +     +F++ L ++G + EA ELF+ +       D   Y  
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++DG  K+G+   A+ +   +       +VV YN++I GL   G+ + +      M +  
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLG 431

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            APD  TF+ +I+ + +        +LL++MK   + P++   +I+V  L
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 236/495 (47%), Gaps = 9/495 (1%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY+ LI+  CK+G V+ G +    +      PN   ++S++ G   +  + EA 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  K+      PNV  Y TLI+G  +     IAL+LF+EM +   E       N     
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE------ENNFVID 336

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           + ++ L + G +++A  LF  M    + PD V Y S++ G   A   ++A  +  EM ++
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
                VV +NV+++ L K  K  E+      M Q G+ P++ T+NT+++ +C  G +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M+S G K + ++ NIL+   C   E+E+ + L  +M+  G  PT  T+  +   
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  + +  L   D++   GV  D  TY T I   C+ G I  A  +F+ +       D
Sbjct: 516 SSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN LI G C S  LK A+ +   +    + PNV TYNI++ GL     + +A  L  
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVN 635

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M+E    P+  T+D+L+ G  +I    +  +L  +M  K  +P     ++++    K +
Sbjct: 636 QMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGK 695

Query: 572 ISLKSLPSFLVQERQ 586
               S    L+QE Q
Sbjct: 696 --KMSQAKELMQEMQ 708



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 222/484 (45%), Gaps = 63/484 (13%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN++ Y  LI+ + K  +  +    F  +       N    +S +  L    R+ EA 
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC-------- 203
            LF  + + G  P+ + Y ++++G  + G    A N+ +EM   +    VV         
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412

Query: 204 --------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
                                P++ T++T+I+  CKEG +  A  L  +MK   + P+ +
Sbjct: 413 FKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSI 472

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T N L+  LC A +  +   L  +M+  G  P+  T   ++D   K+R+ D      D +
Sbjct: 473 TCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQL 532

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V  GV+ +  TYNTL+  FC +G I RA  +F  M   G   D ++YN LI+GYC +  +
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHL 592

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A +++ +M+++G+ P V TYN L  GL     ++ A  L ++M+  G+  +  TY   
Sbjct: 593 KKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G  K G + E V+L+       CE+  + +                            
Sbjct: 653 VSGHGKIGNMKECVKLY-------CEMITKGF---------------------------- 677

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP   TYN++I       +M +A++L  +M+     P+  T+D+LI G+ ++++  ++N+
Sbjct: 678 VPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNK 737

Query: 544 LLHK 547
            L +
Sbjct: 738 SLKR 741



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 4/333 (1%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I   V  +N LI G C   + + A  L   M  +G  P +VT+N +M+  CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L+  +    + PN  TY TL+D +C    +  A  ++  M       D V+Y  ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+ +VEEA S++REM   G+ P   +Y TL   LF+   V  A  L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             YT  +DGL K G    A ++F+ L       +   Y+ LIDG CK G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + PNV+ Y+ ++ G    G +++A D+   M +    P+V  +  LI G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                +L  +MK + +  +    + V+D  V N
Sbjct: 313 RGIALDLFKEMKSRGLEEN----NFVIDSFVNN 341



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 158/345 (45%), Gaps = 24/345 (6%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFC 107
           F   +R     P  ++FN ++ +  K  +    L       + GL PN  T NIL+   C
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
             G +         +L   F P   T  +++       R         +L   G + ++ 
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLS 542

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           TYNTLI+  CR G    A  +F++M  G G +      + +TY+ +I G C    + KA 
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMM-GKGILA-----DIITYNALIHGYCISSHLKKAF 596

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           A+  QM  E ++P+V TYN L+ GL  A    EA  L  +M ++G+ P+  T+++++   
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K   M E  +L   M+ +G  P   TYN L+  F    K+++A+EL   M+  G   + 
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716

Query: 348 VSYNILINGYCK-------NKEVE-----EALSLYREMVSKGIKP 380
            +Y+ILI G+ K       NK ++     EA  L+ EM  KG  P
Sbjct: 717 STYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 18/230 (7%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G+  ++ TYN LI+ +C    +   F    ++L    +PN  T+N L+ GL A   I 
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EAA L  ++K  G  PN  TY+ L++G  + G+    + L+ EM       G V  P T 
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG---LCHANDWN------ 259
           TY+ +I    K   + +AK L  +M+   I P+  TY+ LI G   L    + N      
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 260 ---EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
              EAKRLF EM ++G  P   T   I   L K  K  +A R+L+ + ++
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 79/161 (49%)

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           Q   +      +   IDG C+NG I  AVEL   ++      DI  YN L++G CK G L
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A +L   +    L PNV+TY  +I   C    ++ A  ++ +M   +  PDV+T+  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++G  +  +  +   +  +M+E  V+P+    + ++D L K
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK 169



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 52/92 (56%)

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           H  +  +V  +N++I G C +G++ +A +L   M+    APD++T++ L++GF +I +  
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L+ ++    + P+    + ++D   K++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQ 101


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 244/518 (47%), Gaps = 14/518 (2%)

Query: 43  NVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT----RLNATGLFPNLYT 98
           +  TP     +     R    PP  S  + LLA  +      +     L A    P++ T
Sbjct: 74  HAFTPASLATLHSLAARHCIPPPSASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVST 133

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
           +N L++   + G +      F  +  +   P+  T+  L+  L     + +A  +  ++ 
Sbjct: 134 FNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMS 193

Query: 159 AFGCE--PNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIID 215
           + G +   +++  NT+++GLC+ G    A+   +E M   +G     C PNTVTY+ + D
Sbjct: 194 SPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHG-----CAPNTVTYNCLAD 248

Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
             C+ G +D A  +  +M+ E + P+V+T N+++ GLC       A   F E     ++ 
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEA 308

Query: 276 --SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
             + VT++ ++        +  A  L   M  +G  P+A  Y T++ G    G++  A  
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           +  SM+  G K D  +YNILI G+C+ K + EA  L+ EM   G++P V TYNTL   L 
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +        +L   M  DG      T+ T + G CK G   EA+++FR++   + + +  
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN LID LCKS  +  A +LF  +    +  NV TYN +++GL +    +KA +L   M
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548

Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEK 551
           +E    PD +T D+L+     I E  ++   + +  EK
Sbjct: 549 KEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEK 586



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 222/447 (49%), Gaps = 16/447 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+ +TFNSL+  L     +     LFT ++    +P+++TY  L+N LC+ G    AL +
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN---PDVVTY 245
            + M++   +   VC  + V  +T++DGLCK G +  A  +F+  +   ++   P+ VTY
Sbjct: 189 LDRMSSPGSD---VCA-DIVILNTVVDGLCKIGRLQDA-IVFVDERMRQVHGCAPNTVTY 243

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           N L    C   D + A ++   M  +GV P+V+T N I+  LC+  ++  A   LD   +
Sbjct: 244 NCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAA---LDFFRE 300

Query: 306 RG-----VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
           +       R NA TY+TL+  F     +  A ELF  M   G   D V Y  +I+G  + 
Sbjct: 301 KRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQA 360

Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
             + +A ++   M   G K     YN L  G     ++  A +LF+EM+  G+  D  TY
Sbjct: 361 GRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTY 420

Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
            T +  LCK G      EL   +    C+  +  +  L+ G CK+G+   A ++F S+  
Sbjct: 421 NTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGE 480

Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
             + PN V YN +I  LC   ++D A  LF +M EN    +V T++ L+ G    N P K
Sbjct: 481 ARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEK 540

Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLL 567
             EL+ +MKE++  PD   + ++++ L
Sbjct: 541 AFELMDQMKEERCTPDYVTMDVLMEWL 567



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 228/486 (46%), Gaps = 18/486 (3%)

Query: 46  TPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTY 99
           +P +A       L      P VS+FN LL++L +  +        T +    + P++ TY
Sbjct: 110 SPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTY 169

Query: 100 NILINCFCKIGRVSLGFIAFGRILR--SCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
            IL+N  CK G V        R+    S    +    N+++ GL    R+ +A     + 
Sbjct: 170 GILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDER 229

Query: 158 --KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
             +  GC PN +TYN L +  CR G   +A  + E M     + GV   PN +T +TI+ 
Sbjct: 230 MRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERME----KEGVT--PNVITMNTIVG 283

Query: 216 GLCKEGFVDKAKALFLQMKDENINP--DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
           GLC+ G V  A   F + +   +    + VTY++L+    H N+   A  LF EM DQG 
Sbjct: 284 GLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGY 343

Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
            P  V +  ++  L +  ++ +A  +   M + G + +   YN L+ GFC   +++ A +
Sbjct: 344 PPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQ 403

Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
           LF  M+  G + D  +YN L++  CK  +      L   M+  G +P+VVT+ TL  G  
Sbjct: 404 LFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYC 463

Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
           +  + + ALK+F  M    +  +T  Y T ID LCK+  +  A++LF  +R      ++ 
Sbjct: 464 KAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVT 523

Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
            YN L+ GL      + A+EL   +      P+ VT +++++ L   G+ ++ +      
Sbjct: 524 TYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQR 583

Query: 514 EENAAA 519
           +E   A
Sbjct: 584 DEKGGA 589



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 191/373 (51%), Gaps = 6/373 (1%)

Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
           P+  T+++++  L + G +     LF  M++ ++ PD+VTY  L++ LC A    +A ++
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 265 FIEMMDQG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR--GVRPNACTYNTLMD 320
              M   G  V   +V  N ++D LCK  ++ +A   +D  +++  G  PN  TYN L D
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI-- 378
             C +G I+ A ++   ME  G   + ++ N ++ G C+   V  AL  +RE  +  +  
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEA 308

Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
           +   VTY+TL       + V  A++LF EM   G   D   Y T I GL + G +++A  
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACN 368

Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
           +  +++    +LD +AYN LI G C+  RL  A +LF  +    L P+V TYN ++  LC
Sbjct: 369 IAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLC 428

Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
             G      +L  +M ++   P V+TF  L+HG+ +  +  +  ++   M E ++ P+  
Sbjct: 429 KAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTV 488

Query: 559 IVSIVVDLLVKNE 571
           I + ++D L K+ 
Sbjct: 489 IYNTLIDFLCKSR 501


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 227/444 (51%), Gaps = 9/444 (2%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           L   G   + + ++ L++ + + G VS     F    +            L++ +   S 
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
            M A   + ++   G  PNV T+N L+N LC+ G    A  +F+E+           +P 
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG------LQPT 266

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
            V+++T+I+G CK G +++   L + M++  + PDV TY++LI GLC      +A  LF 
Sbjct: 267 AVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFK 326

Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
           EM D+G+ P+ VTF  +++  CKN ++D A  +   M  +G++ +   YNTL+DG C  G
Sbjct: 327 EMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGG 386

Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
               A +  G M   G   D  +Y  L++G CK  ++E AL + +EMV +GI+   V + 
Sbjct: 387 YFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFT 446

Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
            +  GL    ++  A +   EM R G+  D  TYT  +DG CK G +    +L + ++  
Sbjct: 447 AIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSD 506

Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
                +  YN L++GLCK G++K A  L  ++ +  +VP+ +TYNI++QG C  G++   
Sbjct: 507 GHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDF 566

Query: 507 RDLFLDMEENAAAPDVITFDMLIH 530
           +++  +M       D  ++  L+H
Sbjct: 567 QNVKTEM---GLVSDYASYRSLLH 587



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 195/360 (54%), Gaps = 6/360 (1%)

Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
           L+  + +    M+AL  + E+ +          PN  T++ +++ LCKEG V  A+ +F 
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSG------YPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256

Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
           +++   + P  V++N+LI+G C + +  E  RL + M +  V P V T++ ++D LCK  
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKEC 316

Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
           ++++A+ L   M  RG+ PN  T+ TL++G C  G+++ A E++  M + G K D V YN
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYN 376

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
            LI+G CK     EA     EM  +G+ P   TY TL  G  +   +E AL++  EM ++
Sbjct: 377 TLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKE 436

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G+  D   +T  I GLC++G I++A    R +     + D   Y  ++DG CK G +K  
Sbjct: 437 GIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMG 496

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
           ++L   +     +P V+TYN+++ GLC  GQ+  A  L   M      PD IT+++L+ G
Sbjct: 497 FKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 203/378 (53%), Gaps = 9/378 (2%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           +G  PN+YT+N+L+N  CK G+V    + F  I ++   P A +FN+LI G      + E
Sbjct: 226 SGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEE 285

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
              L   ++ F   P+V TY+ LI+GLC+      A +LF+EM +     G+V  PN VT
Sbjct: 286 GFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDR----GLV--PNDVT 339

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           ++T+I+G CK G VD A  ++ QM  + +  D+V YN+LI GLC    + EA++   EM 
Sbjct: 340 FTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMT 399

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P   T+  ++D  CK   ++ A  +   MV+ G++ +   +  ++ G C  GKI 
Sbjct: 400 KRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIV 459

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
            AE     M   G K DD +Y ++++G+CK  +V+    L +EM S G  P V+TYN L 
Sbjct: 460 DAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLM 519

Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
            GL +  QV++A  L + M   GV  D  TY   + G CK+G + +   +   + ++   
Sbjct: 520 NGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVS-- 577

Query: 450 LDIQAYNCLIDGLCKSGR 467
            D  +Y  L+  L K+ +
Sbjct: 578 -DYASYRSLLHELSKASK 594



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 184/339 (54%)

Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
           A   +L++ D    P+V T+N L++ LC      +A+ +F E+   G+QP+ V+FN +++
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
             CK+  ++E  RL  +M +  V P+  TY+ L+DG C   ++  A  LF  M   G   
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
           +DV++  LING CKN  V+ AL +Y++M +KG+K  +V YNTL  GL +      A K  
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
            EM + G+  D  TYTT +DG CK G +  A+E+ + +     +LD  A+  +I GLC+ 
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
           G++  A      +    L P+  TY +++ G C  G +     L  +M+ +   P VIT+
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515

Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
           ++L++G  +  +    + LL+ M    V+PD    +I++
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILL 554



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 191/382 (50%), Gaps = 46/382 (12%)

Query: 64  PPPVSSFNILLASLAK-NKHYDTRL-----NATGLFPNLYTYNILINCFCKIGRVSLGFI 117
           PP V +FN+L+  L K  K  D +L       TGL P   ++N LIN +CK G +  GF 
Sbjct: 229 PPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFR 288

Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
               +      P+  T+++LI GL  E ++ +A  LF ++   G  PN +T+ TLING C
Sbjct: 289 LKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQC 348

Query: 178 RTGHTMIALNLFEEMANG---------NGEIGVVCK--------------------PNTV 208
           + G   +AL ++++M            N  I  +CK                    P+  
Sbjct: 349 KNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKF 408

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
           TY+T++DG CKEG ++ A  +  +M  E I  D V + ++I GLC      +A+R   EM
Sbjct: 409 TYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREM 468

Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
           +  G++P   T+ ++MD  CK   +    +LL  M   G  P   TYN LM+G C  G++
Sbjct: 469 LRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQV 528

Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
             A+ L  +M ++G   DD++YNIL+ G+CK+ ++ +  ++  EM   G+     +Y +L
Sbjct: 529 KNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSL 585

Query: 389 FLGLFEIHQVEHALKLFDEMQR 410
                 +H++  A K  D  +R
Sbjct: 586 ------LHELSKASK--DRQKR 599



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 187/369 (50%), Gaps = 6/369 (1%)

Query: 207 TVTYSTIIDGL----CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
           T++ S + D L     + G+V  A   F   K  N+         L+  +   +    A 
Sbjct: 158 TLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVAL 217

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
             ++E++D G  P+V TFNV+M+ LCK  K+ +A  + D + + G++P A ++NTL++G+
Sbjct: 218 EFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGY 277

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
           C  G +     L   ME      D  +Y+ LI+G CK  ++E+A  L++EM  +G+ P  
Sbjct: 278 CKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPND 337

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VT+ TL  G  +  +V+ AL+++ +M   G+ AD   Y T IDGLCK GY  EA +    
Sbjct: 338 VTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGE 397

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDG 501
           +       D   Y  L+DG CK G L+ A E+   +   G+ + NV  +  +I GLC DG
Sbjct: 398 MTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVA-FTAIISGLCRDG 456

Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
           ++  A     +M      PD  T+ M++ GF +  +     +LL +M+    +P     +
Sbjct: 457 KIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYN 516

Query: 562 IVVDLLVKN 570
           ++++ L K 
Sbjct: 517 VLMNGLCKQ 525



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 132/277 (47%)

Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
           +  K   +S    ++  +G   ++  ++ LM  +   G ++ A + F   +    K    
Sbjct: 139 RKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFN 198

Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
               L+    K      AL  Y E++  G  P V T+N L   L +  +V+ A  +FDE+
Sbjct: 199 GCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           ++ G+     ++ T I+G CK+G + E   L   +   +   D+  Y+ LIDGLCK  +L
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
           + A  LF  +    LVPN VT+  +I G C +G++D A +++  M       D++ ++ L
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTL 378

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           I G  +     +  + + +M ++ ++PD    + ++D
Sbjct: 379 IDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLD 415



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 153/327 (46%), Gaps = 5/327 (1%)

Query: 247 SLIHGLCHANDWNEAKRLFIEMMD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
           SL+H +        A  +F  +++ +G   S   F+ +M    +   + +A +   L  +
Sbjct: 131 SLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK 190

Query: 306 RGVR-P-NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
             ++ P N C    L++    M     A E +  +   G   +  ++N+L+N  CK  +V
Sbjct: 191 HNLKIPFNGC--KCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKV 248

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A  ++ E+   G++PT V++NTL  G  +   +E   +L   M+   V  D  TY+  
Sbjct: 249 KDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSAL 308

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           IDGLCK   + +A  LF+ +       +   +  LI+G CK+GR+  A E++  +    L
Sbjct: 309 IDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGL 368

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
             ++V YN +I GLC  G   +AR    +M +    PD  T+  L+ G  +  +     E
Sbjct: 369 KADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALE 428

Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKN 570
           +  +M ++ +  D    + ++  L ++
Sbjct: 429 MRKEMVKEGIQLDNVAFTAIISGLCRD 455


>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 766

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 255/532 (47%), Gaps = 13/532 (2%)

Query: 48  NEAFCIFDYMLRMHPS-PPPVSSFNILLASLAKNKHYD--------TRLNATGLFPNLYT 98
           ++AF + D ML+     PP   + +I+L  + K +           +R ++ G+ PN   
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIGLISRFSSHGVSPNSVW 261

Query: 99  YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
               I+  CK  R +  +     ++++     A  FN+L+  L     I    AL  K+ 
Sbjct: 262 LTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNMNIGRMNALVLKMD 321

Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
                P+V+T   LIN LC++     AL +FE+M     + G V K +++ ++T+IDGLC
Sbjct: 322 EMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLC 381

Query: 219 KEGFVDKAKALFLQMK-DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
           K G + +A+ L ++MK +E   P+ VTYN LI G C A     AK +   M + G++P V
Sbjct: 382 KVGRLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDV 441

Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
           VT N I+  +C++  ++ A      M + GV+ N  TY TL+   C +  I +A   F  
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDK 501

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF-EIH 396
           M   GC  D   Y  LI+G C+ +   +A+ +  ++   G    ++ YN L +GLF + +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNML-IGLFCDKN 560

Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
             E   ++  +M+++G+  D+ TY T I    K+        +   +R  + +  +  Y 
Sbjct: 561 NAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYG 620

Query: 457 CLIDGLCKSGRLKFAWELFCSLP-HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
            +I+  C  G L  A +LF  +     + PN V YNI+I      G   +A  L  +M+ 
Sbjct: 621 AVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680

Query: 516 NAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
               P+V T++ L       N+   + +L+ +M E+   P+   + I+++ L
Sbjct: 681 KMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITMEILMERL 732



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 228/490 (46%), Gaps = 24/490 (4%)

Query: 95  NLYTYNILINCFCKIGRVSLGFIAFGRILR--SCFTPNAAT----FNSLIKG-LHAESRI 147
           N    N++I+   + G V   F     +L+  S F PN  T     + + KG L  E +I
Sbjct: 184 NSQVRNVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKI 243

Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
           +    L ++  + G  PN +     I+ LC+   T  A ++  ++      +        
Sbjct: 244 I---GLISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPL------EA 294

Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
             ++ ++  L +   + +  AL L+M +  I PDVVT   LI+ LC +   +EA ++F +
Sbjct: 295 PPFNALLSCLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQ 354

Query: 268 M----MDQG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLM-VQRGVRPNACTYNTLMD 320
           M     D G  ++   + FN ++D LCK  ++ EA  LL  M ++    PN  TYN L+D
Sbjct: 355 MCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNCLID 414

Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
           G+C  GK+  A+E+   M+  G K D V+ N ++ G C++  +  A+  + +M  +G+K 
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKG 474

Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
            VVTY TL      +  +E A+  FD+M   G + D + Y   I GLC+     +A+ + 
Sbjct: 475 NVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534

Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
             LR     LD+ AYN LI   C     +  +E+   +    + P+ +TYN +I      
Sbjct: 535 EKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKH 594

Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMK-EKKVMPDASI 559
              +    +   M E+   P V T+  +I  +  + E  +  +L   M    KV P+  I
Sbjct: 595 KDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVI 654

Query: 560 VSIVVDLLVK 569
            +I+++   K
Sbjct: 655 YNILINAFSK 664



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 91/423 (21%), Positives = 179/423 (42%), Gaps = 45/423 (10%)

Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE-GFVDKAKALFLQMKDE 236
           R G   +A++ FE + + +  +    +  ++   ++I+    E    DK   L+   K++
Sbjct: 87  RLGSYSLAISFFEYLDSKSQSLKRREESLSLALQSVIEFAGSEPDSRDKLLRLYEIAKEK 146

Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
           NI   VV    LI         N++  L  E +D  ++ S V  NV++D L +N  +D+A
Sbjct: 147 NIPLTVVATKLLIRWFGRMGMANQSV-LVYERLDSNMKNSQVR-NVVIDVLLRNGLVDDA 204

Query: 297 SRLLDLMVQRG--VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
            ++LD M+Q+     PN  T + ++      G++   E++ G                  
Sbjct: 205 FKVLDEMLQKESVFPPNRITADIVLHE-VWKGRLLTEEKIIG------------------ 245

Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
                         L     S G+ P  V        L +  +   A  +  ++ ++   
Sbjct: 246 --------------LISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAP 291

Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
            +   +   +  L +N  I     L   +  +K   D+     LI+ LCKS R+  A ++
Sbjct: 292 LEAPPFNALLSCLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQV 351

Query: 475 FCSL------PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAPDVITFDM 527
           F  +         V+  + + +N +I GLC  G++ +A +L + M+ E    P+ +T++ 
Sbjct: 352 FEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNC 411

Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
           LI G+ R  +     E++ +MKE  + PD   V+ +V  + ++     ++  F+  E++G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEG 471

Query: 588 EVG 590
             G
Sbjct: 472 VKG 474


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 248/519 (47%), Gaps = 15/519 (2%)

Query: 53  IFDYMLRMHPSPPPVSSFNILLA--------SLAKNKHYDTRLNATGLFPNLYTYNILIN 104
           +FD M    PSP  + S+++L++         L + +   + +   G+ PN  TY   + 
Sbjct: 198 LFDDMKISGPSPN-IYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLY 256

Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
             C+  +V   +     + +  +  N+  FN++I G   + ++ +A  +F  +K  G  P
Sbjct: 257 GLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVP 316

Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVD 224
           +V +Y+ L++GLC+ G  +    +  EMA  NG       PN V+YS+++ GLC+ G V+
Sbjct: 317 DVHSYSILVDGLCKQGDVLTGYYMLVEMAR-NG-----ITPNLVSYSSLLHGLCRAGRVE 370

Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
            A  LF ++KD+    D + Y+ ++HG C   D      L+ +M+     P    ++ ++
Sbjct: 371 LAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLI 430

Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
              C++R++ EA  + +LM+  G+ PN  T   L+ GF   G I  A      +   G  
Sbjct: 431 YAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVV 490

Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
            +  +Y ++ING CK  +  +   ++ +M+ +G  P  V Y+ +  G  +   ++ A +L
Sbjct: 491 PNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRL 550

Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
           + +M  +G   +  TYT+ I+GLC +  + E + LF+ +       D   Y  LI   CK
Sbjct: 551 YYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCK 610

Query: 465 SGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVIT 524
              +K A E+F  +    L  +   Y  +I G      MD A+    +M      P V+T
Sbjct: 611 RSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVT 670

Query: 525 FDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
           +  LI G+ +I +  K   + + M +  + PDA +  I+
Sbjct: 671 YTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 226/461 (49%), Gaps = 6/461 (1%)

Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
           N L+KGL   ++IM   +LF  +K  G  PN+ +Y+ L++    T    + L   +E+ +
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMS--MYTHGAKLCLEEAQELLS 237

Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP-DVVTYNSLIHGLC 253
                GV  +PN  TY T + GLC+   V K+   FLQM  +   P +   +N++IHG C
Sbjct: 238 EMEVEGV--RPNAATYGTYLYGLCRAKQV-KSAWNFLQMLCQRGYPCNSYCFNAVIHGFC 294

Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
           H    ++A  +F  M   G  P V ++++++D LCK   +     +L  M + G+ PN  
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354

Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
           +Y++L+ G C  G++  A ELF  ++  G KHD + Y+I+++G C++ ++E    L+ +M
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDM 414

Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
           V     P    Y++L        Q++ AL++F+ M  DG+  +  T T  + G    G I
Sbjct: 415 VHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLI 474

Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
            EA      +R      ++  Y  +I+GLCK  +    W +F  +     VP+ V Y+I+
Sbjct: 475 GEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSII 534

Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
           I G      + +A  L+  M +    P++ T+  LI+G    ++  +V  L   M  + +
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGL 594

Query: 554 MPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGESNV 594
            PD  + + ++    K      +L  F   E +G   +S V
Sbjct: 595 TPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFV 635



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 220/431 (51%), Gaps = 18/431 (4%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G  P++++Y+IL++  CK G V  G+     + R+  TPN  +++SL+ GL    R
Sbjct: 309 MKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGR 368

Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
           +  A  LF +LK  G + + I Y+ +++G C+     I  +L+ +M + N        P+
Sbjct: 369 VELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHN------FVPD 422

Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
              YS++I   C+   + +A  +F  M  + I P+VVT   L+HG  +     EA  LF+
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEA-FLFL 481

Query: 267 EMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
           + + Q GV P++ T+ VI++ LCK  K ++   +   M++RG  P+   Y+ ++DGF   
Sbjct: 482 DKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKA 541

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
             +  A  L+  M   G K +  +Y  LING C + ++ E ++L++ M+ +G+ P  + Y
Sbjct: 542 LDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILY 601

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
            +L     +   ++ AL++F EM+ +G++AD+  YT  I G  K    ++  +LF    +
Sbjct: 602 TSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKV-LAMDGAQLFMEEMM 660

Query: 446 LK-CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
            K     +  Y  LI G  K G  K A  ++ S+    + P+     I+  GL NDG   
Sbjct: 661 NKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL--GLGNDG--- 715

Query: 505 KARDLFLDMEE 515
              D F D +E
Sbjct: 716 ---DDFADSQE 723



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 189/399 (47%), Gaps = 41/399 (10%)

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
            Y+T+I    +    + A   +++ K   +   V   N L+ GL   N     + LF +M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVELQVC--NFLLKGLVEGNQIMYVRSLFDDM 202

Query: 269 MDQGVQPSVVTFNVIMDELCKNRK--MDEASRLLDLMVQRGVRPNACTY----------- 315
              G  P++ +++V+M       K  ++EA  LL  M   GVRPNA TY           
Sbjct: 203 KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK 262

Query: 316 ------------------------NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
                                   N ++ GFC  G++++A E+F  M+  G   D  SY+
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
           IL++G CK  +V     +  EM   GI P +V+Y++L  GL    +VE A +LF  ++  
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
           G   D   Y+  + G C++  +    +L+  +       D   Y+ LI   C+  +LK A
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD-MEENAAAPDVITFDMLIH 530
            E+F  +    + PNVVT  I++ G  N+G + +A  LFLD + +    P++ T+ ++I+
Sbjct: 443 LEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAF-LFLDKVRQFGVVPNLCTYRVIIN 501

Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           G  ++N+P+ V  +   M ++  +PD  + SI++D  VK
Sbjct: 502 GLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVK 540


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 249/513 (48%), Gaps = 16/513 (3%)

Query: 61  HPS-PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVS 113
           HP     V  FN+L+    +N            +   G  P++ TYN L+N FCKIG + 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                 G I      PN  T+ +LI        + +A  ++ ++      P+V+TY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           NGLC++G    A ++F EM     E+GVV  PN  +Y+T+ID L KEG V +A  L  +M
Sbjct: 130 NGLCKSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRM 183

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               I  DVV Y +L+ GL  A   N A+ +F  ++++ + P+ VT++ ++D  CK   +
Sbjct: 184 VVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDV 243

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           ++   LL  M ++ + PN   Y++++DG+   G +N A ++   M       +   Y  L
Sbjct: 244 NKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+GY K  +   AL L++EM S+G++      ++    L    ++E A +LF +M   G+
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   YT+ +DG  K G   +A  + + +       D+ AYN LI+GL K G  K+  E
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG--KYESE 421

Query: 474 LF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            F   +    L P+  T+N MI   C +G +  A  L  +M+     P+ IT ++L+   
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
               E  K  +LL+ M      P  +    V+D
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 229/470 (48%), Gaps = 44/470 (9%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           FN LI G      I  A  L   +K  G  P+++TYNTL+NG C+ G    A  L     
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM---- 75

Query: 194 NGNGEIGVV-CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              GEI +V  +PN +TY+T+ID  CK   ++ A  ++ +M  +++ PDVVTY  +++GL
Sbjct: 76  ---GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR--- 309
           C +    EAK +F EM + GV P+  ++  ++D L K   + EA  L   MV RG+    
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 310 --------------------------------PNACTYNTLMDGFCLMGKINRAEELFGS 337
                                           PN  TY+ L+DG C +G +N+ E L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME      + + Y+ +++GY K   + EA+ + R+MV + I P V  Y TL  G F+  Q
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
              AL LF EM+  G+  +     +F++ L ++G + EA ELF+ +       D   Y  
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++DG  K+G+   A+ +   +       +VV YN++I GL   G+ + +      M +  
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLG 431

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            APD  TF+ +I+ + +        +LL++MK   + P++   +I+V  L
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 237/495 (47%), Gaps = 9/495 (1%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY+ LI+  CK+G V+ G +    +      PN   ++S++ G   +  + EA 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  K+      PNV  Y TLI+G  +     IAL+LF+EM +   E       N     
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE------ENNFVID 336

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           + ++ L + G +++A  LF  M    + PD V Y S++ G   A   ++A  +  EM ++
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
                VV +NV+++ L K  K  E+      M Q G+ P++ T+NT+++ +C  G +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M+S G K + ++ NIL+   C   E+E+ + L  +M+  G  PT  T+  +   
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  + +  L + D++   GV  D  TY T I   C+ G I  A  +F+ +       D
Sbjct: 516 SSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN LI G C S  LK A+ +   +    + PNV TYNI++ GL     + +A  L  
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVN 635

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M+E    P+  T+D+L+ G  +I    +  +L  +M  K  +P     ++++    K +
Sbjct: 636 QMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGK 695

Query: 572 ISLKSLPSFLVQERQ 586
               S    L+QE Q
Sbjct: 696 KM--SQAKELMQEMQ 708



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 223/484 (46%), Gaps = 63/484 (13%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN++ Y  LI+ + K  +  +    F  +       N    +S +  L    R+ EA 
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC-------- 203
            LF  + + G  P+ + Y ++++G  + G    A N+ +EM   +    VV         
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412

Query: 204 --------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
                                P++ T++T+I+  CKEG +  A  L  +MK   + P+ +
Sbjct: 413 FKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSI 472

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T N L+  LC A +  +   L  +M+  G  P+  T   ++D   K+R+ D    + D +
Sbjct: 473 TCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQL 532

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V  GV+ +  TYNTL+  FC +G I RA  +F  M   G   D ++YN LI+GYC +  +
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHL 592

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A +++ +M+++G+ P V TYN L  GL     ++ A  L ++M+  G+  +  TY   
Sbjct: 593 KKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G  K G + E V+L+       CE+  + +                            
Sbjct: 653 VSGHGKIGNMKECVKLY-------CEMITKGF---------------------------- 677

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP   TYN++I       +M +A++L  +M+     P+  T+D+LI G+ ++++  ++N+
Sbjct: 678 VPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNK 737

Query: 544 LLHK 547
            L +
Sbjct: 738 SLKR 741



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 4/333 (1%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I   V  +N LI G C   + + A  L   M  +G  P +VT+N +M+  CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L+  +    + PN  TY TL+D +C    +  A  ++  M       D V+Y  ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+ +VEEA S++REM   G+ P   +Y TL   LF+   V  A  L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             YT  +DGL K G    A ++F+ L       +   Y+ LIDG CK G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + PNV+ Y+ ++ G    G +++A D+   M +    P+V  +  LI G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                +L  +MK + +  +    + V+D  V N
Sbjct: 313 RGIALDLFKEMKSRGLEEN----NFVIDSFVNN 341



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 24/345 (6%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFC 107
           F   +R     P  ++FN ++ +  K  +    L       + GL PN  T NIL+   C
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
             G +         +L   F P   T  +++       R      +  +L   G + ++ 
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLS 542

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           TYNTLI+  CR G    A  +F++M  G G +      + +TY+ +I G C    + KA 
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMM-GKGILA-----DIITYNALIHGYCISSHLKKAF 596

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           A+  QM  E ++P+V TYN L+ GL  A    EA  L  +M ++G+ P+  T+++++   
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K   M E  +L   M+ +G  P   TYN L+  F    K+++A+EL   M+  G   + 
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716

Query: 348 VSYNILINGYCK-------NKEVE-----EALSLYREMVSKGIKP 380
            +Y+ILI G+ K       NK ++     EA  L+ EM  KG  P
Sbjct: 717 STYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 18/230 (7%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G+  ++ TYN LI+ +C    +   F    ++L    +PN  T+N L+ GL A   I 
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EAA L  ++K  G  PN  TY+ L++G  + G+    + L+ EM       G V  P T 
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG---LCHANDWN------ 259
           TY+ +I    K   + +AK L  +M+   I P+  TY+ LI G   L    + N      
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 260 ---EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
              EAKRLF EM ++G  P   T   I   L K  K  +A R+L+ + ++
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 79/161 (49%)

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           Q   +      +   IDG C+NG I  AVEL   ++      DI  YN L++G CK G L
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A +L   +    L PNV+TY  +I   C    ++ A  ++ +M   +  PDV+T+  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++G  +  +  +   +  +M+E  V+P+    + ++D L K
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK 169



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 52/92 (56%)

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           H  +  +V  +N++I G C +G++ +A +L   M+    APD++T++ L++GF +I +  
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L+ ++    + P+    + ++D   K++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQ 101


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 181/316 (57%), Gaps = 10/316 (3%)

Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
           P+  TF +L+ GL  E R+++A AL  ++   G +P    Y T+INGLC+ G T  ALNL
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63

Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
             +M   +       K + V Y+ IID LCK+G    A+ LF +M D+ I PDV+TY+ +
Sbjct: 64  LSKMEETH------IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117

Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
           I   C +  W +A++L  +M+++ + P VVTF+ +++ L K  K+ EA  +   M++RG+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177

Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
            P   TYN+++DGFC   ++N A+ +  SM S  C  D V+++ LINGYCK K V+  + 
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237

Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
           ++ EM  +GI    VTY TL  G  ++  ++ A  L + M   GVA +  T+ + +  LC
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297

Query: 429 KNGYIIEAVELFRTLR 444
               + +A  +   L+
Sbjct: 298 SKKELRKAFAILEDLQ 313



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 175/321 (54%), Gaps = 10/321 (3%)

Query: 90  TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIME 149
           TG  P++ T+  L+N  C  GRV        R++     P     N L K    ES    
Sbjct: 4   TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTES---- 59

Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVT 209
           A  L +K++    + +V+ YN +I+ LC+ GH + A NLF EM +     G+   P+ +T
Sbjct: 60  ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK----GIF--PDVIT 113

Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
           YS +ID  C+ G    A+ L   M +  INPDVVT+++LI+ L      +EA+ ++ +M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173

Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
            +G+ P+ +T+N ++D  CK  ++++A R+LD M  +   P+  T++TL++G+C   +++
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233

Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
              E+F  M   G   + V+Y  LI+G+C+  +++ A  L   M+S G+ P  +T+ ++ 
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293

Query: 390 LGLFEIHQVEHALKLFDEMQR 410
             L    ++  A  + +++Q+
Sbjct: 294 ASLCSKKELRKAFAILEDLQK 314



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 164/320 (51%), Gaps = 4/320 (1%)

Query: 233 MKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRK 292
           M +    PDVVT+ +L++GLC      +A  L   M+++G QP    +  I++ LCK   
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
            + A  LL  M +  ++ +   YN ++D  C  G    A+ LF  M   G   D ++Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
           +I+ +C++    +A  L R+M+ + I P VVT++ L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
           +   T TY + IDG CK   + +A  +  ++    C  D+  ++ LI+G CK+ R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
           E+FC +    +V N VTY  +I G C  G +D A+DL   M  +  AP+ ITF  ++   
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 533 IRINEPSKVNELLHKMKEKK 552
               E  K   +L  +++ +
Sbjct: 297 CSKKELRKAFAILEDLQKSE 316



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 151/306 (49%), Gaps = 5/306 (1%)

Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
           M++ G +P VVTF  +M+ LC   ++ +A  L+D MV+ G +P    Y T+++G C MG 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
              A  L   ME    K   V YN +I+  CK+     A +L+ EM  KGI P V+TY+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
           +        +   A +L  +M    +  D  T++  I+ L K G + EA E++  +    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
                  YN +IDG CK  RL  A  +  S+      P+VVT++ +I G C   ++D   
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD-ASIVSIVVDL 566
           ++F +M       + +T+  LIHGF ++ +     +LL+ M    V P+  +  S++  L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296

Query: 567 LVKNEI 572
             K E+
Sbjct: 297 CSKKEL 302



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 4/255 (1%)

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           M   GC+ D V++  L+NG C    V +AL+L   MV +G +P    Y T+  GL ++  
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
            E AL L  +M+   + A    Y   ID LCK+G+ I A  LF  +       D+  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           +ID  C+SGR   A +L   +    + P+VVT++ +I  L  +G++ +A +++ DM    
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
             P  IT++ +I GF + +  +    +L  M  K   PD    S +++   K +     +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 578 PSFLVQERQGEVGES 592
             F    R+G V  +
Sbjct: 237 EIFCEMHRRGIVANT 251


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 249/513 (48%), Gaps = 16/513 (3%)

Query: 61  HPS-PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVS 113
           HP     V  FN+L+    +N            +   G  P++ TYN L+N FCKIG + 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 114 LGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
                 G I      PN  T+ +LI        + +A  ++ ++      P+V+TY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
           NGLC++G    A ++F EM     E+GVV  PN  +Y+T+ID L KEG V +A  L  +M
Sbjct: 130 NGLCKSGKVEEAKSVFREME----EVGVV--PNRFSYATLIDSLFKEGNVAEAFVLQGRM 183

Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
               I  DVV Y +L+ GL  A   N A+ +F  ++++ + P+ VT++ ++D  CK   +
Sbjct: 184 VVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDV 243

Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
           ++   LL  M ++ + PN   Y++++DG+   G +N A ++   M       +   Y  L
Sbjct: 244 NKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTL 303

Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
           I+GY K  +   AL L++EM S+G++      ++    L    ++E A +LF +M   G+
Sbjct: 304 IDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGL 363

Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
             D   YT+ +DG  K G   +A  + + +       D+ AYN LI+GL K G  K+  E
Sbjct: 364 LPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG--KYESE 421

Query: 474 LF-CSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
            F   +    L P+  T+N MI   C +G +  A  L  +M+     P+ IT ++L+   
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
               E  K  +LL+ M      P  +    V+D
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLD 514



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 229/470 (48%), Gaps = 44/470 (9%)

Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
           FN LI G      I  A  L   +K  G  P+++TYNTL+NG C+ G    A  L     
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM---- 75

Query: 194 NGNGEIGVV-CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
              GEI +V  +PN +TY+T+ID  CK   ++ A  ++ +M  +++ PDVVTY  +++GL
Sbjct: 76  ---GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR--- 309
           C +    EAK +F EM + GV P+  ++  ++D L K   + EA  L   MV RG+    
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 310 --------------------------------PNACTYNTLMDGFCLMGKINRAEELFGS 337
                                           PN  TY+ L+DG C +G +N+ E L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
           ME      + + Y+ +++GY K   + EA+ + R+MV + I P V  Y TL  G F+  Q
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
              AL LF EM+  G+  +     +F++ L ++G + EA ELF+ +       D   Y  
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
           ++DG  K+G+   A+ +   +       +VV YN++I GL   G+ + +      M +  
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLG 431

Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
            APD  TF+ +I+ + +        +LL++MK   + P++   +I+V  L
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 237/495 (47%), Gaps = 9/495 (1%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           L PN  TY+ LI+  CK+G V+ G +    +      PN   ++S++ G   +  + EA 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
            +  K+      PNV  Y TLI+G  +     IAL+LF+EM +   E       N     
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE------ENNFVID 336

Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
           + ++ L + G +++A  LF  M    + PD V Y S++ G   A   ++A  +  EM ++
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
                VV +NV+++ L K  K  E+      M Q G+ P++ T+NT+++ +C  G +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
            +L   M+S G K + ++ NIL+   C   E+E+ + L  +M+  G  PT  T+  +   
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
             +  + +  L + D++   GV  D  TY T I   C+ G I  A  +F+ +       D
Sbjct: 516 SSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
           I  YN LI G C S  LK A+ +   +    + PNV TYNI++ GL     + +A  L  
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVN 635

Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
            M+E    P+  T+D+L+ G  +I    +  +L  +M  K  +P     ++++    K +
Sbjct: 636 QMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGK 695

Query: 572 ISLKSLPSFLVQERQ 586
               S    L+QE Q
Sbjct: 696 --KMSQAKELMQEMQ 708



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 223/484 (46%), Gaps = 63/484 (13%)

Query: 92  LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
           + PN++ Y  LI+ + K  +  +    F  +       N    +S +  L    R+ EA 
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC-------- 203
            LF  + + G  P+ + Y ++++G  + G    A N+ +EM   +    VV         
Sbjct: 353 ELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL 412

Query: 204 --------------------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
                                P++ T++T+I+  CKEG +  A  L  +MK   + P+ +
Sbjct: 413 FKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSI 472

Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
           T N L+  LC A +  +   L  +M+  G  P+  T   ++D   K+R+ D    + D +
Sbjct: 473 TCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQL 532

Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
           V  GV+ +  TYNTL+  FC +G I RA  +F  M   G   D ++YN LI+GYC +  +
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHL 592

Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
           ++A +++ +M+++G+ P V TYN L  GL     ++ A  L ++M+  G+  +  TY   
Sbjct: 593 KKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDIL 652

Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
           + G  K G + E V+L+       CE+  + +                            
Sbjct: 653 VSGHGKIGNMKECVKLY-------CEMITKGF---------------------------- 677

Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
           VP   TYN++I       +M +A++L  +M+     P+  T+D+LI G+ ++++  ++N+
Sbjct: 678 VPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNK 737

Query: 544 LLHK 547
            L +
Sbjct: 738 SLKR 741



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 4/333 (1%)

Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
           I   V  +N LI G C   + + A  L   M  +G  P +VT+N +M+  CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
           +L+  +    + PN  TY TL+D +C    +  A  ++  M       D V+Y  ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
           CK+ +VEEA S++REM   G+ P   +Y TL   LF+   V  A  L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
             YT  +DGL K G    A ++F+ L       +   Y+ LIDG CK G +     L   
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
           +    + PNV+ Y+ ++ G    G +++A D+   M +    P+V  +  LI G+ + ++
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
                +L  +MK + +  +    + V+D  V N
Sbjct: 313 RGIALDLFKEMKSRGLEEN----NFVIDSFVNN 341



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 159/345 (46%), Gaps = 24/345 (6%)

Query: 54  FDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFC 107
           F   +R     P  ++FN ++ +  K  +    L       + GL PN  T NIL+   C
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482

Query: 108 KIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI 167
             G +         +L   F P   T  +++       R      +  +L   G + ++ 
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLS 542

Query: 168 TYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAK 227
           TYNTLI+  CR G    A  +F++M  G G +      + +TY+ +I G C    + KA 
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMM-GKGILA-----DIITYNALIHGYCISSHLKKAF 596

Query: 228 ALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDEL 287
           A+  QM  E ++P+V TYN L+ GL  A    EA  L  +M ++G+ P+  T+++++   
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656

Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
            K   M E  +L   M+ +G  P   TYN L+  F    K+++A+EL   M+  G   + 
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716

Query: 348 VSYNILINGYCK-------NKEVE-----EALSLYREMVSKGIKP 380
            +Y+ILI G+ K       NK ++     EA  L+ EM  KG  P
Sbjct: 717 STYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 18/233 (7%)

Query: 89  ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
             G+  ++ TYN LI+ +C    +   F    ++L    +PN  T+N L+ GL A   I 
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
           EAA L  ++K  G  PN  TY+ L++G  + G+    + L+ EM       G V  P T 
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHG---LCHANDWN------ 259
           TY+ +I    K   + +AK L  +M+   I P+  TY+ LI G   L    + N      
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 260 ---EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVR 309
              EAKRLF EM ++G  P   T   I   L K  K  +A R+L+ + ++ V+
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKVK 795



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 79/161 (49%)

Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
           Q   +      +   IDG C+NG I  AVEL   ++      DI  YN L++G CK G L
Sbjct: 9   QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68

Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
             A +L   +    L PNV+TY  +I   C    ++ A  ++ +M   +  PDV+T+  +
Sbjct: 69  FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
           ++G  +  +  +   +  +M+E  V+P+    + ++D L K
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFK 169



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 52/92 (56%)

Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
           H  +  +V  +N++I G C +G++ +A +L   M+    APD++T++ L++GF +I +  
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
              +L+ ++    + P+    + ++D   K++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQ 101


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 214/442 (48%), Gaps = 8/442 (1%)

Query: 126 CFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
           C TP   T++  I  L   +RI     L   +   GC P++   N  I  LC+      A
Sbjct: 225 CLTP--FTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDA 282

Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
           L + E+M            P+ VTY T++ GLC      +A  L+ +M   ++ PDV + 
Sbjct: 283 LQMVEKMRTKG------TSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSC 336

Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
            +LI GLC  N  +EA  L   M+   ++ SV  +N ++    +   +D+A +++  M  
Sbjct: 337 GALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRT 396

Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
            G  P+  TYN L++ +C +G + +AE+L   ME+ G   D  SYN L+ G CK  ++++
Sbjct: 397 NGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDK 456

Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
           A +   + +  G     V+ N L     +  +V+ AL+LF EM   G+ AD  TY T I+
Sbjct: 457 AFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLIN 516

Query: 426 GLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVP 485
           GL   GY   A ELF  +   + + ++  YN ++  LCK G  K A  +F  +    + P
Sbjct: 517 GLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSP 576

Query: 486 NVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELL 545
           + VT+N +I  L    +  +A +LF DM      PD +TF  LI G +   + +   E+ 
Sbjct: 577 DTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVW 636

Query: 546 HKMKEKKVMPDASIVSIVVDLL 567
             M E  ++ D  +   ++ +L
Sbjct: 637 EYMMENGIILDREVSERLISVL 658



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 230/474 (48%), Gaps = 10/474 (2%)

Query: 86  RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
           R+ + G+  +   Y IL++ + + G+       F  ++ S        +N  I  L    
Sbjct: 148 RVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNC 207

Query: 146 --RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
              ++E        K F   P   TY+  I+ LC++      + L +E+     ++G  C
Sbjct: 208 CFDLVEKYYDMALAKGFCLTP--FTYSRWISALCQSNR----IELVQELLVDMDKLG--C 259

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+    +  I  LCK+  +  A  +  +M+ +  +PDVVTY +++ GLC    + EA  
Sbjct: 260 SPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIG 319

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L+ EM+ + ++P V +   ++  LCKN K+DEA  L   M+   +  + C YN L+ GF 
Sbjct: 320 LWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFW 379

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
             G I++A ++   M + GC+ D V+YNIL+N YC    +E+A  L R+M + G+ P   
Sbjct: 380 RAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRY 439

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           +YN L  GL + HQ++ A     +    G   DT +    ID  CK   +  A+ELF+ +
Sbjct: 440 SYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEM 499

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                + D   Y  LI+GL   G    A ELF  + +  + PNV  YNIM+  LC  G  
Sbjct: 500 GYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHF 559

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
            +A+ +F  M +   +PD +TF+ LI+   + +   +   L   M+ + V PD 
Sbjct: 560 KRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDT 613



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 211/462 (45%), Gaps = 6/462 (1%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
            GR+       + + +  L+ G     +       F ++   GC    + YN  I  L +
Sbjct: 146 LGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVK 205

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
                   +L E+  +     G    P   TYS  I  LC+   ++  + L + M     
Sbjct: 206 N----CCFDLVEKYYDMALAKGFCLTP--FTYSRWISALCQSNRIELVQELLVDMDKLGC 259

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
           +PD+   N  I+ LC  N   +A ++  +M  +G  P VVT+  ++  LC N+K  EA  
Sbjct: 260 SPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIG 319

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
           L + MV+R ++P+  +   L+ G C   K++ A EL   M ++  +     YN LI+G+ 
Sbjct: 320 LWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFW 379

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           +   +++A  +   M + G +P +VTYN L      I  +E A KL  +M+  GV  D  
Sbjct: 380 RAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRY 439

Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
           +Y   + GLCK   + +A         +    D  + N LID  CK+ ++K A ELF  +
Sbjct: 440 SYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEM 499

Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
            +  +  + VTY  +I GL + G  + A +LF  M      P+V  +++++H   ++   
Sbjct: 500 GYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHF 559

Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
            +   +   M +K+V PD    + ++  L K   ++++L  F
Sbjct: 560 KRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLF 601



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 164/405 (40%), Gaps = 52/405 (12%)

Query: 193 ANGNGEIGVVCKPNTVTYSTII-----DGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
            N  G +  + +P  +  S II       +C E  V+      L+  D  ++P VV  N 
Sbjct: 44  TNSPGRLSELFRPVRMDISGIILQALERSMCSEPLVE------LERLDVELDPIVV--NL 95

Query: 248 LIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQR 306
           ++ GL   +D   A R +     + G   S      ++  L  +      S  L  +  +
Sbjct: 96  VVRGL---SDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQ 152

Query: 307 GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEA 366
           GV  +   Y  L+ G+   GK +   E F  M   GC+   V YN  I    KN   +  
Sbjct: 153 GVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLV 212

Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
              Y   ++KG   T  TY+     L + +++E   +L  +M + G + D      +I  
Sbjct: 213 EKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYY 272

Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
           LCK   + +A+++   +R      D+  Y  ++ GLC + +   A  L+  +    L P+
Sbjct: 273 LCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPD 332

Query: 487 VVTYNIMIQGLCNDGQMDKA-----RDLFLDME--------------------------- 514
           V +   +I GLC + ++D+A     R L LD+E                           
Sbjct: 333 VFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIIS 392

Query: 515 ---ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
               N   PD++T+++L++ +  I    K  +L+ KM+   V PD
Sbjct: 393 FMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPD 437



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 1/110 (0%)

Query: 83  YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLH 142
           ++  LNA  + PN+  YNI+++  CK+G        F  +++   +P+  TFN+LI  L 
Sbjct: 531 FEQMLNAQ-IDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLG 589

Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
             SR +EA  LF  ++  G EP+ +T+  LI+GL   G + +A  ++E M
Sbjct: 590 KRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYM 639


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 235/480 (48%), Gaps = 8/480 (1%)

Query: 87  LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
           +   G+ P+   Y I I+  CK+          G++  + F P   T++S++  L    R
Sbjct: 211 MAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGR 270

Query: 147 IMEAAALFTK-LKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
           + EA  L  + L A G + +V+    L++G C  G    AL+LF+E+ +     GV   P
Sbjct: 271 MDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSD----GVT--P 324

Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
             VTY  +I G   EG  D+   L  QM ++ +      +N +I GL     W +A  L 
Sbjct: 325 TNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL 384

Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
             ++D GV P V T+  ++  LCK++K+ EA  L D M + GV+P+  TY++L+ G+C  
Sbjct: 385 ELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443

Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
           G+++ A +L+  M   G   ++V+Y  L+ GY K K  + A +L  EM   G+     TY
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
           N L  GL+ +++V    ++      +G    T TY + I+G  K G +  A  ++R +R 
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
                +I  Y   IDG C++     A +L   +    + P++  YN  I   C  G M +
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623

Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
           A    + + ++   PDV  ++  + G+  +   ++ ++  + M +++V+ D  I + ++D
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLID 683



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 227/487 (46%), Gaps = 7/487 (1%)

Query: 84  DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHA 143
           D  L ATG   ++    +L++ +C  G V      F  ++    TP   T+  LIKG  A
Sbjct: 279 DQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDA 338

Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
           E    E   L  ++   G   +   +N +I GL R      A+ L E +     + GV  
Sbjct: 339 EGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVV----DTGV-- 392

Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
            P+  TY  +I  LCK   + +A  L+ +MK+  + P +VTY+SL+ G C     +EA +
Sbjct: 393 -PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALK 451

Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
           L+ EM D+G  P+ VT+  +M    K +  D A  LL+ M Q GV     TYN L++G  
Sbjct: 452 LYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLY 511

Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
           ++ ++   +E+     S G     ++YN +ING+ K   +  A  +YR+M  KGI P +V
Sbjct: 512 MVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIV 571

Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
           TY +   G    +  + A+KL   ++RDG+  D   Y  FID  CK G +  A+     L
Sbjct: 572 TYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLL 631

Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
                  D+  YN  + G      +  A + + S+    +V +   Y  +I G    G +
Sbjct: 632 LKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNV 691

Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
             A +L+ +M  N   PD  TF  L HG  R  +      LL  M+   V P+    +++
Sbjct: 692 AFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNML 751

Query: 564 VDLLVKN 570
           ++  V++
Sbjct: 752 INACVRD 758



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 187/381 (49%), Gaps = 12/381 (3%)

Query: 65  PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
           P V ++  L+  L K++     +N        G+ P++ TY+ L+  +C+ GR+      
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           +  +    F PN  T+ +L+KG   +     A AL  +++  G      TYN LINGL  
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL-- 510

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
             + +  +   +EM       G V  P T+TY++II+G  K G +  A  ++ QM+ + I
Sbjct: 511 --YMVNRVCEVDEMLKRFLSEGFV--PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
            P++VTY S I G C  N  + A +L I +   G+QP +  +N  +D  CK   M  A  
Sbjct: 567 TPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH 626

Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
            L L+++ G+ P+   YN+ + G+  +  +  A + + SM       D   Y  LI+G+ 
Sbjct: 627 FLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFS 686

Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
           K   V  AL LY EM++  + P   T+  L  GL     ++ A +L D+M+R  V+ +  
Sbjct: 687 KVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIV 746

Query: 419 TYTTFIDGLCKNGYIIEAVEL 439
           TY   I+   ++G + EA +L
Sbjct: 747 TYNMLINACVRDGKLQEAFQL 767



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 213/488 (43%), Gaps = 43/488 (8%)

Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
           + R++     P+A +   L+      +   +A  LF +++  GC  +   Y+ +I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
            G    A+ LF+EMA      G   KP+   Y+  I GLCK    D+A  +  +M++   
Sbjct: 198 GGMHCDAVRLFDEMA------GAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251

Query: 239 NPDVVTYNS------------------------------------LIHGLCHANDWNEAK 262
            P  +TY+S                                    L+HG C   +  +A 
Sbjct: 252 EPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKAL 311

Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
            LF E++  GV P+ VT+ V++         DE  +L   M+++G+  +   +N ++ G 
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL 371

Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
               +   A  L   +   G   D  +Y  LI+  CK++++ EA++L+ +M   G+KP++
Sbjct: 372 LRDKRWKDAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
           VTY++L LG  E  +++ ALKL+ EM   G   +  TYTT + G  K      A  L   
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
           +R          YN LI+GL    R+    E+         VP  +TYN +I G    G 
Sbjct: 491 MRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGM 550

Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
           M  A  ++  M +    P+++T+   I G+ R N      +LL  ++   + PD +  + 
Sbjct: 551 MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNA 610

Query: 563 VVDLLVKN 570
            +D   K 
Sbjct: 611 FIDTFCKQ 618



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 3/239 (1%)

Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
           +  M + G   D  S   L+    +     +AL+L+ EM  KG       Y+ +      
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
                 A++LFDEM   GV  D R Y   I GLCK      A+++   +R    E     
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 455 YNCLIDGLCKSGRLKFAWELFCS--LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
           Y+ ++D L K GR+  A  L     L  G  + +VV   +++ G C  G++ KA DLF +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKM-DVVLATMLMHGYCLHGEVGKALDLFDE 316

Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
           +  +   P  +T+ +LI G        +  +L  +M E+ ++      ++V+  L++++
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDK 375


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.139    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,785,546,238
Number of Sequences: 23463169
Number of extensions: 353819528
Number of successful extensions: 1096130
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8573
Number of HSP's successfully gapped in prelim test: 4532
Number of HSP's that attempted gapping in prelim test: 751596
Number of HSP's gapped (non-prelim): 90414
length of query: 595
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 447
effective length of database: 8,886,646,355
effective search space: 3972330920685
effective search space used: 3972330920685
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)