BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040027
(595 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 330/574 (57%), Gaps = 26/574 (4%)
Query: 5 SCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
S C R FS S FR S +V I ++A +F M+R P P
Sbjct: 40 SSCERDFSSISNGNVCFRERLRSGIVD-------------IKKDDAIALFQEMIRSRPLP 86
Query: 65 PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
V F+ +++A+ K ++ +L G+ N+YT NI+INCFC+ + +
Sbjct: 87 SLVD-FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
G++++ + P+ TFN+LIKGL E ++ EA L ++ GC+P+V+TYN+++NG+CR
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+G T +AL+L +M N K + TYSTIID LC++G +D A +LF +M+ + I
Sbjct: 206 SGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
VVTYNSL+ GLC A WN+ L +M+ + + P+V+TFNV++D K K+ EA+
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
L M+ RG+ PN TYNTLMDG+C+ +++ A + M C D V++ LI GYC
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
K V++ + ++R + +G+ VTY+ L G + +++ A +LF EM GV D
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY +DGLC NG + +A+E+F L+ K +L I Y +I+G+CK G+++ AW LFCSL
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
P + PNV+TY +MI GLC G + +A L MEE+ AP+ T++ LI +R +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
+ +L+ +MK DAS + +V+D+L+ E+
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLLSGEL 593
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 190/396 (47%), Gaps = 6/396 (1%)
Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
A+ LF+EM P+ V +S + + + Q++ I ++ T
Sbjct: 72 AIALFQEMIRSRP------LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
N +I+ C A + ++M G +P TFN ++ L K+ EA L+D MV
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
+ G +P+ TYN++++G C G + A +L ME K D +Y+ +I+ C++ ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
A+SL++EM +KGIK +VVTYN+L GL + + L +M + + T+ +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
D K G + EA EL++ + +I YN L+DG C RL A + +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
P++VT+ +I+G C ++D +F ++ + + +T+ +L+ GF + + EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
+M V+PD I++D L N K+L F
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 1/197 (0%)
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
G+ +I + + A+ LF EM R ++ F + + ++ + L +
Sbjct: 63 GIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
+I N +I+ C+ + FA+ + + P+ T+N +I+GL +G++ +A L
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
M EN PDV+T++ +++G R + S +LL KM+E+ V D S ++D L ++
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 571 EISLKSLPSFLVQERQG 587
++ F E +G
Sbjct: 242 GCIDAAISLFKEMETKG 258
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/605 (35%), Positives = 332/605 (54%), Gaps = 62/605 (10%)
Query: 5 SCCNRSFSFASAPISAFRSNFS-SLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPS 63
S C R F+ +R S + L+H + +EA +F M++ P
Sbjct: 16 SFCLRGIYFSGLSYDGYREKLSRNALLHLK-------------LDEAVDLFGEMVKSRPF 62
Query: 64 PPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
P V F+ LL+++AK K +D ++ G+ NLYTYNI+INC C+ ++S
Sbjct: 63 PSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 118 AFGRILR-----------------------------------SCFTPNAATFNSLIKGLH 142
G++++ + P+ TF +L+ GL
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
++ EA AL ++ GC+P+++TY +INGLC+ G +ALNL +M G E VV
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
YST+ID LCK VD A LF +M ++ I PDV TY+SLI LC+ W++A
Sbjct: 242 ------IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
RL +M+++ + P+VVTFN ++D K K+ EA +L D M+QR + PN TYN+L++GF
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
C+ +++ A+++F M S C D V+YN LING+CK K+V + + L+R+M +G+
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
VTY TL G F+ ++A +F +M DGV + TY T +DGLCKNG + +A+ +F
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
L+ K E DI YN + +G+CK+G+++ W+LFCSL + P+V+ YN MI G C G
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
++A LF+ M+E+ PD T++ LI +R + + EL+ +M+ + DAS +
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL 595
Query: 563 VVDLL 567
V D+L
Sbjct: 596 VTDML 600
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 228/452 (50%), Gaps = 8/452 (1%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
FG +++S P+ F+ L+ + + + K++ G N+ TYN +IN LCR
Sbjct: 53 FGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCR 112
Query: 179 TGHTMIALNLFEEMAN-GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
AL + +M G G P+ VT +++++G C + +A AL QM +
Sbjct: 113 RSQLSFALAILGKMMKLGYG-------PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
PD VT+ +L+HGL N +EA L M+ +G QP +VT+ +++ LCK + D A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
LL+ M + + + Y+T++D C ++ A LF M++ G + D +Y+ LI+
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
C +A L +M+ + I P VVT+N+L + ++ A KLFDEM + + +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
TY + I+G C + + EA ++F + C D+ YN LI+G CK+ ++ ELF
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
+ LV N VTY +I G D A+ +F M + P+++T++ L+ G + +
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
K + +++ K+ PD +I+ + + K
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 221/425 (52%), Gaps = 6/425 (1%)
Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
++ EA LF ++ P+++ ++ L++ + + + ++ E+M +GV
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SH 98
Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
N TY+ +I+ LC+ + A A+ +M P +VT NSL++G CH N +EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
+M++ G QP VTF ++ L ++ K EA L++ MV +G +P+ TY +++G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
G+ + A L ME + D V Y+ +I+ CK + V++AL+L+ EM +KGI+P V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
++L L + A +L +M + + T+ + ID K G +IEA +LF +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
+ +I YN LI+G C RL A ++F + +P+VVTYN +I G C ++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
+LF DM + +T+ LIHGF + ++ + +M V P+ + ++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 566 LLVKN 570
L KN
Sbjct: 459 GLCKN 463
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 193/370 (52%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
+D+A LF +M P +V ++ L+ + ++ +M GV ++ T+N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+++ LC+ ++ A +L M++ G P+ T N+L++GFC +I+ A L M MG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
+ D V++ L++G ++ + EA++L MV KG +P +VTY + GL + + + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L ++M++ + AD Y+T ID LCK ++ +A+ LF + D+ Y+ LI L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C GR A L + + PNVVT+N +I +G++ +A LF +M + + P++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
+T++ LI+GF + + ++ M K +PD + +++ K + + + F
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 583 QERQGEVGES 592
R+G VG +
Sbjct: 406 MSRRGLVGNT 415
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 34 DLTTREGDINVITPN-------------EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN 80
D+ R+ + NV+T N EA +FD M++ P + ++N L+ +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMH 358
Query: 81 KHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
D T + + P++ TYN LIN FCK +V G F + R N T+
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEE--- 191
+LI G S A +F ++ + G PN++TYNTL++GLC+ G A+ +FE
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 192 ------------MANGNGEIGVV--------------CKPNTVTYSTIIDGLCKEGFVDK 225
M+ G + G V KP+ + Y+T+I G CK+G ++
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
A LF++MK++ PD TYN+LI D + L EM T+ ++ D
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Query: 286 ELCKNR 291
L R
Sbjct: 599 MLHDGR 604
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/606 (36%), Positives = 331/606 (54%), Gaps = 61/606 (10%)
Query: 3 LESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHP 62
L CC R FS S ++R S LV I ++A +F M+ P
Sbjct: 38 LSFCCERGFSAFSDRNLSYRERLRSGLVD-------------IKADDAIDLFRDMIHSRP 84
Query: 63 SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGF 116
P V F+ L +++AK K YD ++ G+ NLYT +I+INCFC+ ++ L F
Sbjct: 85 -LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143
Query: 117 IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGL 176
A G+I++ + PN TF++LI GL E R+ EA L ++ G +P++IT NTL+NGL
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 177 CRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY-------------------------- 210
C +G A+ L ++M E G C+PN VTY
Sbjct: 204 CLSGKEAEAMLLIDKMV----EYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 211 ---------STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
S IIDGLCK G +D A LF +M+ + I +++TYN LI G C+A W++
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
+L +M+ + + P+VVTF+V++D K K+ EA L M+ RG+ P+ TY +L+DG
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
FC +++A ++ M S GC + ++NILINGYCK +++ L L+R+M +G+
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
VTYNTL G E+ ++ A +LF EM V + TY +DGLC NG +A+E+F
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
+ K ELDI YN +I G+C + ++ AW+LFCSLP + P V TYNIMI GLC G
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
+ +A LF MEE+ APD T+++LI + + +K +L+ ++K DAS +
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 562 IVVDLL 567
+V+D+L
Sbjct: 618 MVIDML 623
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 245/486 (50%), Gaps = 41/486 (8%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
F ++ S P F+ L + + AL +++ G N+ T + +IN CR
Sbjct: 76 FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+A + ++ I + +PNT+T+ST+I+GLC EG V +A L +M +
Sbjct: 136 CRKLCLAFSAMGKI------IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PD++T N+L++GLC + EA L +M++ G QP+ VT+ +++ +CK+ + A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
LL M +R ++ +A Y+ ++DG C G ++ A LF ME G + ++YNILI G+C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
++ L R+M+ + I P VVT++ L + ++ A +L EM G+A DT
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 419 TYTTFIDGLCK------------------------------NGY-----IIEAVELFRTL 443
TYT+ IDG CK NGY I + +ELFR +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
+ D YN LI G C+ G+L A ELF + + PN+VTY I++ GLC++G+
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
+KA ++F +E++ D+ ++++IHG ++ +L + K V P +I+
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 564 VDLLVK 569
+ L K
Sbjct: 550 IGGLCK 555
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 223/456 (48%), Gaps = 6/456 (1%)
Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
S F+ ++ ++ + + +A LF + P VI ++ L + + +T +
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
L L ++M E+ + N T S +I+ C+ + A + ++ P+ +T
Sbjct: 107 VLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
+++LI+GLC +EA L M++ G +P ++T N +++ LC + K EA L+D MV
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
+ G +PNA TY +++ C G+ A EL ME K D V Y+I+I+G CK+ ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
A +L+ EM KGI ++TYN L G + + KL +M + + + T++ I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
D K G + EA EL + + D Y LIDG CK L A ++ +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
PN+ T+NI+I G C ++D +LF M D +T++ LI GF + + + EL
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
+M +KV P+ I++D L N S K+L F
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 35/262 (13%)
Query: 65 PPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P ++ L+ K H D + + G PN+ T+NILIN +CK R+ G
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
F ++ + T+N+LI+G ++ A LF ++ + PN++TY L++GLC
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 179 TGHTMIALNLFEEMANGNGEIGV---------VC--------------------KPNTVT 209
G + AL +FE++ E+ + +C KP T
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
Y+ +I GLCK+G + +A+ LF +M+++ PD TYN LI D ++ +L E+
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 270 DQGVQPSVVTFNVIMDELCKNR 291
G T +++D L R
Sbjct: 606 RCGFSVDASTIKMVIDMLSDGR 627
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/615 (35%), Positives = 333/615 (54%), Gaps = 50/615 (8%)
Query: 6 CCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPP 65
CC R FS S ++R SS LV I ++A +F M++ P P
Sbjct: 41 CCERGFSTFSDRNLSYRDKLSSGLVG-------------IKADDAVDLFRDMIQSRP-LP 86
Query: 66 PVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
V FN L +++AK K Y+ ++ + G+ ++YT +I+INCFC+ ++S F
Sbjct: 87 TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTM 146
Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
G+I++ + P+ FN+L+ GL E R+ EA L ++ G +P +IT NTL+NGLC
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
Query: 180 GHTMIALNLFEEMANGNGE---------IGVVCKP--------------------NTVTY 210
G A+ L + M + + V+CK + V Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
S IIDGLCK+G +D A LF +M+ + D++TYN+LI G C+A W++ +L +M+
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
+ + P+VVTF+V++D K K+ EA +LL M+QRG+ PN TYN+L+DGFC ++
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
A ++ M S GC D +++NILINGYCK +++ L L+REM +G+ VTYNTL
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
G + ++E A KLF EM V D +Y +DGLC NG + +A+E+F + K EL
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
DI Y +I G+C + ++ AW+LFCSLP + + YNIMI LC + KA LF
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
M E APD +T+++LI + ++ + EL+ +MK D S V +V+++L
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Query: 571 EISLKSLPSFLVQER 585
E+ KS L R
Sbjct: 627 ELD-KSFLDMLSTTR 640
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 341/595 (57%), Gaps = 50/595 (8%)
Query: 15 SAPISAFRS-NFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNIL 73
++P+ + R FS+ +R+ +R ++ + ++A +F M++ P P V FN L
Sbjct: 29 ASPLFSLRGVYFSAASYDYREKLSRNVLLD-LKLDDAVDLFGEMVQSRPLPSIVE-FNKL 86
Query: 74 LASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--- 124
L+++AK +D R+ + +LY+YNILINCFC+ ++ L G++++
Sbjct: 87 LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146
Query: 125 -------------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAA 152
C + PN TFN+LI GL ++ EA A
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
L ++ A GC+P++ TY T++NGLC+ G +AL+L ++M G E VV Y+T
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------IYTT 260
Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
IID LC V+ A LF +M ++ I P+VVTYNSLI LC+ W++A RL +M+++
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
+ P+VVTF+ ++D K K+ EA +L D M++R + P+ TY++L++GFC+ +++ A+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
+F M S C + V+YN LI G+CK K VEE + L+REM +G+ VTYNTL GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
F+ + A K+F +M DGV D TY+ +DGLCK G + +A+ +F L+ K E DI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
YN +I+G+CK+G+++ W+LFCSL + PNV+ Y MI G C G ++A LF +
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
M+E+ P+ T++ LI +R + + EL+ +M+ + DAS +S+V+++L
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 183/370 (49%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
+D A LF +M P +V +N L+ + N ++ L M + + + ++N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+++ C+ ++ A +L M++ G P+ T ++L++G+C +I+ A L M M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
+ + V++N LI+G + + EA++L MV++G +P + TY T+ GL + ++ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L +M++ + AD YTT ID LC + +A+ LF + ++ YN LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C GR A L + + PNVVT++ +I +G++ +A L+ +M + + PD+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
T+ LI+GF + + + M K P+ + ++ K + + + F
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 583 QERQGEVGES 592
++G VG +
Sbjct: 421 MSQRGLVGNT 430
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNIL 102
EA ++D M++ P + +++ L+ L + KH + + FPN+ TYN L
Sbjct: 343 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
I FCK RV G F + + N T+N+LI+GL A +F K+ + G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
P++ITY+ L++GLC+ G AL +FE + E I +CK
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
PN + Y+T+I G C++G ++A ALF +MK++ P+ TYN+LI
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
D + L EM G T +++++ L R
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 337/600 (56%), Gaps = 56/600 (9%)
Query: 10 SFSFASAPISAFRSNFSSLLVH-FRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVS 68
SFSF +R FS + +R+ +R G ++ + ++A +F M++ P P +
Sbjct: 31 SFSFF------WRRAFSGKTSYDYREKLSRNG-LSELKLDDAVALFGEMVKSRPFPSIIE 83
Query: 69 SFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
F+ LL+++AK +D ++ G+ N YTY+ILINCFC+ ++ L G++
Sbjct: 84 -FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 123 LR-----------------------------------SCFTPNAATFNSLIKGLHAESRI 147
++ + + PN TFN+LI GL ++
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 148 MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNT 207
EA AL ++ A GC+P+++TY ++NGLC+ G T +A NL +M G E P
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGV 256
Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
+ Y+TIIDGLCK +D A LF +M+ + I P+VVTY+SLI LC+ W++A RL +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
M+++ + P V TF+ ++D K K+ EA +L D MV+R + P+ TY++L++GFC+ +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
++ A+++F M S C D V+YN LI G+CK K VEE + ++REM +G+ VTYN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
L GLF+ + A ++F EM DGV + TY T +DGLCKNG + +A+ +F L+ K
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
E I YN +I+G+CK+G+++ W+LFC+L + P+VV YN MI G C G ++A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
LF +M+E+ P+ ++ LI +R + EL+ +M+ DAS + +V ++L
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 233/451 (51%), Gaps = 6/451 (1%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
FG +++S P+ F+ L+ + ++ +L +++ G N TY+ LIN CR
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+AL + +M E PN VT S++++G C + +A AL QM
Sbjct: 129 RSQLPLALAVLGKMMKLGYE------PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
P+ VT+N+LIHGL N +EA L M+ +G QP +VT+ V+++ LCK D A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
LL+ M Q + P YNT++DG C ++ A LF ME+ G + + V+Y+ LI+ C
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+A L +M+ + I P V T++ L + ++ A KL+DEM + +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY++ I+G C + + EA ++F + C D+ YN LI G CK R++ E+F +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
LV N VTYNI+IQGL G D A+++F +M + P+++T++ L+ G + +
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
K + ++ K+ P +I+++ + K
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 234/444 (52%), Gaps = 6/444 (1%)
Query: 143 AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV 202
+E ++ +A ALF ++ P++I ++ L++ + + + ++L E+M N +G+
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112
Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
N TYS +I+ C+ + A A+ +M P++VT +SL++G CH+ +EA
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
L +M G QP+ VTFN ++ L + K EA L+D MV +G +P+ TY +++G
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
C G + A L ME + + YN +I+G CK K +++AL+L++EM +KGI+P V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
VTY++L L + A +L +M + D T++ ID K G ++EA +L+
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
+ + I Y+ LI+G C RL A ++F + P+VVTYN +I+G C +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
+++ ++F +M + + +T+++LI G + + E+ +M V P+ +
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 563 VVDLLVKNEISLKSLPSFLVQERQ 586
++D L KN K++ F +R
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRS 495
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 186/370 (50%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
+D A ALF +M P ++ ++ L+ + N ++ L +M + G+ + T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+++ C+ ++ A +L M++ G PN T ++L++G+C +I+ A L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
+ + V++N LI+G + + EA++L MV+KG +P +VTY + GL + + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L ++M++ + Y T IDGLCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C GR A L + + P+V T++ +I +G++ +A L+ +M + + P +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
+T+ LI+GF + + ++ M K PD + ++ K + + + F
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 583 QERQGEVGES 592
++G VG +
Sbjct: 422 MSQRGLVGNT 431
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
+EA +F++M+ H P V ++N L+ K K + ++ GL N TYNI
Sbjct: 378 DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
LI + G + F ++ PN T+N+L+ GL ++ +A +F L+
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
EP + TYN +I G+C+ G +LF ++ GV KP+ V Y+T+I G C++G
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVVAYNTMISGFCRKG 550
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
++A ALF +MK++ P+ YN+LI D + L EM G T
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG 610
Query: 282 VIMDELCKNR 291
++ + L R
Sbjct: 611 LVTNMLHDGR 620
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 64 PPPVSSFNILLASLAKNKHYDTR------LNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
PP + ++N LL L KN + L + + P +YTYNI+I CK G+V G+
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
F + P+ +N++I G + EA ALF ++K G PN YNTLI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST--IIDGLCKEGFVD 224
R G + L +EM + G +T+ T + DG + F+D
Sbjct: 583 RDGDREASAELIKEMRS----CGFAGDASTIGLVTNMLHDGRLDKSFLD 627
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/608 (34%), Positives = 340/608 (55%), Gaps = 52/608 (8%)
Query: 1 MGLESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRM 60
+G C SF+ S + +FS + +R ++ +N + ++A +F M++
Sbjct: 20 LGKGKCGTAPPSFSHC--SFWVRDFSGVRYDYRKISINR--LNDLKLDDAVNLFGDMVKS 75
Query: 61 HPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSL 114
P P V F+ LL+++AK +D ++ G+ NLYTY+ILINCFC+ ++SL
Sbjct: 76 RPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSL 134
Query: 115 GFIAF-----------------------------------GRILRSCFTPNAATFNSLIK 139
G+++ + P++ TFN+LI
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
GL +R EA AL ++ GC+P+++TY ++NGLC+ G +AL+L ++M G E
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE- 253
Query: 200 GVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWN 259
P V Y+TIID LC V+ A LF +M ++ I P+VVTYNSLI LC+ W+
Sbjct: 254 -----PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 260 EAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
+A RL +M+++ + P+VVTF+ ++D K K+ EA +L D M++R + P+ TY++L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
+GFC+ +++ A+ +F M S C + V+YN LI G+CK K V+E + L+REM +G+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
VTY TL G F+ + ++A +F +M DGV D TY+ +DGLC NG + A+ +
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
F L+ K E DI YN +I+G+CK+G+++ W+LFCSL + PNVVTY M+ G C
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
G ++A LF +M+E PD T++ LI +R + + EL+ +M+ + + DAS
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Query: 560 VSIVVDLL 567
+ +V ++L
Sbjct: 609 IGLVTNML 616
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 222/425 (52%), Gaps = 6/425 (1%)
Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
++ +A LF + P+++ ++ L++ + + + ++L E+M N +G+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 114
Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
N TYS +I+ C+ + A A+ +M PD+VT NSL++G CH N ++A L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
+M++ G QP TFN ++ L ++ + EA L+D MV +G +P+ TY +++G C
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
G I+ A L ME + V YN +I+ C K V +AL+L+ EM +KGI+P VVTY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
N+L L + A +L +M + + T++ ID K G ++EA +L+ +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
+ DI Y+ LI+G C RL A +F + PNVVTYN +I+G C ++D+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
+LF +M + + +T+ LIHGF + E + +M V+PD SI++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 566 LLVKN 570
L N
Sbjct: 475 GLCNN 479
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 225/451 (49%), Gaps = 6/451 (1%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
FG +++S P+ F+ L+ + ++ +L +++ G N+ TY+ LIN CR
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+AL + +M E P+ VT +++++G C + A +L QM +
Sbjct: 129 RSQLSLALAVLAKMMKLGYE------PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PD T+N+LIHGL N +EA L M+ +G QP +VT+ ++++ LCK +D A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
LL M Q + P YNT++D C +N A LF M++ G + + V+YN LI C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+A L +M+ + I P VVT++ L + ++ A KL+DEM + + D
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY++ I+G C + + EA +F + C ++ YN LI G CK+ R+ ELF +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
LV N VTY +I G + D A+ +F M + PD++T+ +L+ G +
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
+ ++ K+ PD +I+++ + K
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 333/584 (57%), Gaps = 50/584 (8%)
Query: 25 FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
FSS +R++ R G ++ + ++A +F M++ P P V FN LL+++AK K +D
Sbjct: 46 FSSGSGDYREIL-RNG-LHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFD 102
Query: 85 T------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-------------- 124
++ + LYTYNILINCFC+ ++SL G++++
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 125 ---------------------SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
+ P+ TF +LI GL ++ EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
PN++TY ++NGLC+ G T +ALNL +M E VV ++TIID LCK V
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV------IFNTIIDSLCKYRHV 276
Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
D A LF +M+ + I P+VVTY+SLI LC W++A +L +M+++ + P++VTFN +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
+D K K EA +L D M++R + P+ TYN+L++GFC+ ++++A+++F M S C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
D V+YN LI G+CK+K VE+ L+REM +G+ VTY TL GLF ++A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
+F +M DGV D TY+ +DGLC NG + +A+E+F ++ + +LDI Y +I+G+C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
K+G++ W+LFCSL + PNVVTYN MI GLC+ + +A L M+E+ P+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
T++ LI +R + + EL+ +M+ + + DAS + +V ++L
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 230/451 (50%), Gaps = 6/451 (1%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
FG +++S P+ FN L+ + + +L K++ + TYN LIN CR
Sbjct: 73 FGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCR 132
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+AL L +M E P+ VT S++++G C + A AL QM +
Sbjct: 133 RSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PD +T+ +LIHGL N +EA L M+ +G QP++VT+ V+++ LCK D A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
LL+ M + + +NT++D C ++ A LF ME+ G + + V+Y+ LI+ C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+A L +M+ K I P +VT+N L + + A KL+D+M + + D
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY + ++G C + + +A ++F + C D+ YN LI G CKS R++ ELF +
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
H LV + VTY +IQGL +DG D A+ +F M + PD++T+ +L+ G +
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
K E+ M++ ++ D I + +++ + K
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 234/467 (50%), Gaps = 12/467 (2%)
Query: 115 GFIAFGRILRSCFTPNAATFNSLIK-GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
G +GR F+ + + +++ GLH + ++ +A LF + P+++ +N L+
Sbjct: 38 GMCYWGR----AFSSGSGDYREILRNGLH-DMKLDDAIGLFGGMVKSRPLPSIVEFNKLL 92
Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
+ + + + ++L E+M G+ TY+ +I+ C+ + A AL +M
Sbjct: 93 SAIAKMKKFDVVISLGEKMQRLEIVHGLY------TYNILINCFCRRSQISLALALLGKM 146
Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
P +VT +SL++G CH ++A L +M++ G +P +TF ++ L + K
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
EA L+D MVQRG +PN TY +++G C G + A L ME+ + D V +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
I+ CK + V++AL+L++EM +KGI+P VVTY++L L + A +L +M +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
+ T+ ID K G +EA +L+ + + DI YN L++G C RL A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
+F + P+VVTYN +I+G C +++ +LF +M D +T+ LI G
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
+ ++ +M V PD SI++D L N K+L F
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 182/370 (49%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
+D A LF M P +V +N L+ + ++ L +M + + T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+++ C+ ++ A LL M++ G P+ T ++L++G+C +I+ A L M MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
+ D +++ LI+G + + EA++L MV +G +P +VTY + GL + + AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L ++M+ + AD + T ID LCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C GR A +L + + PN+VT+N +I +G+ +A L+ DM + + PD+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
T++ L++GF + K ++ M K PD + ++ K++ F
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 583 QERQGEVGES 592
+G VG++
Sbjct: 426 MSHRGLVGDT 435
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 1/236 (0%)
Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
IL NG + ++++A+ L+ MV P++V +N L + ++ + + + L ++MQR
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
+ TY I+ C+ I A+ L + L E I + L++G C R+ A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
L + P+ +T+ +I GL + +A L M + P+++T+ ++++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
+ + LL+KM+ K+ D I + ++D L K +L F E +G
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/607 (34%), Positives = 334/607 (55%), Gaps = 64/607 (10%)
Query: 17 PISAFRSNFSSLL------VHFRDLTT---------REGDINVITPNEAFCIFDYMLRMH 61
P++ SNF+ +L +H+ +T R G ++ I N+A +F+ M++
Sbjct: 7 PLNRKASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVD-IKVNDAIDLFESMIQSR 65
Query: 62 PSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLG 115
P P P+ FN L +++A+ K YD L G+ ++YT I+INC+C+ ++
Sbjct: 66 PLPTPID-FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
F GR + + P+ TF++L+ G E R+ EA AL ++ P+++T +TLING
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 176 LC-----------------------------------RTGHTMIALNLFEEMANGNGEIG 200
LC ++G++ +AL+LF +M N
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN---- 240
Query: 201 VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
K + V YS +ID LCK+G D A +LF +M+ + I DVVTY+SLI GLC+ W++
Sbjct: 241 --IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
++ EM+ + + P VVTF+ ++D K K+ EA L + M+ RG+ P+ TYN+L+D
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 321 GFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKP 380
GFC ++ A ++F M S GC+ D V+Y+ILIN YCK K V++ + L+RE+ SKG+ P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 381 TVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF 440
+TYNTL LG + ++ A +LF EM GV TY +DGLC NG + +A+E+F
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 441 RTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCND 500
++ + L I YN +I G+C + ++ AW LFCSL + P+VVTYN+MI GLC
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
G + +A LF M+E+ PD T+++LI + + EL+ +MK D+S +
Sbjct: 539 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Query: 561 SIVVDLL 567
+V+D+L
Sbjct: 599 KMVIDML 605
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 8/457 (1%)
Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
S T ++ ++ + ++ +A LF + P I +N L + + RT +
Sbjct: 29 SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 88
Query: 185 ALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
L + M NG + + T + +I+ C++ + A ++ + PD +
Sbjct: 89 VLGFCKGMELNG-------IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI 141
Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
T+++L++G C +EA L M++ +P +VT + +++ LC ++ EA L+D M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
V+ G +P+ TY +++ C G A +LF ME K V Y+I+I+ CK+
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
++ALSL+ EM KGIK VVTY++L GL + + K+ EM + D T++
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
ID K G ++EA EL+ + D YN LIDG CK L A ++F +
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
P++VTY+I+I C ++D LF ++ P+ IT++ L+ GF + + + E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
L +M + V P I++D L N K+L F
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 50/315 (15%)
Query: 25 FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK----- 79
FS+L+ D+ +EG + EA +++ M+ +P ++ +N L+ K
Sbjct: 318 FSALI----DVFVKEGKLL-----EAKELYNEMITRGIAPDTIT-YNSLIDGFCKENCLH 367
Query: 80 --NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSL 137
N+ +D + + G P++ TY+ILIN +CK RV G F I PN T+N+L
Sbjct: 368 EANQMFDLMV-SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 138 IKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNG 197
+ G ++ A LF ++ + G P+V+TY L++GLC G AL +FE+M
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 198 EIGV---------VC--------------------KPNTVTYSTIIDGLCKEGFVDKAKA 228
+G+ +C KP+ VTY+ +I GLCK+G + +A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
LF +MK++ PD TYN LI + + L EM G T +++D L
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML- 605
Query: 289 KNRKMDEASRLLDLM 303
+R++D++ LD++
Sbjct: 606 SDRRLDKS--FLDML 618
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
+V +A+ L+ M+ PT + +N L + Q + L M+ +G+ D T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
I+ C+ ++ A + L E D ++ L++G C GR+ A L +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
P++VT + +I GLC G++ +A L M E PD +T+ +++ + +
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
+L KM+E+ + SIV+D L K+ +L F E +G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/552 (36%), Positives = 316/552 (57%), Gaps = 48/552 (8%)
Query: 57 MLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIG 110
M++ P P + FN LL+++AK K +D ++ G+ NLYTYNILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 111 RVSLGFIAFGRILR----------------SC-------------------FTPNAATFN 135
++SL G++++ C + P+ TF
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
+LI GL ++ EA AL ++ GC+PN++TY ++NGLC+ G +A NL +M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
E VV ++TIID LCK VD A LF +M+ + I P+VVTY+SLI LC
Sbjct: 180 KIEADVV------IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
W++A +L +M+++ + P++VTFN ++D K K EA +L D M++R + P+ TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
N+L++GFC+ ++++A+++F M S C D +YN LI G+CK+K VE+ L+REM
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
+G+ VTY TL GLF ++A K+F +M DGV D TY+ +DGLC NG + +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
A+E+F ++ + +LDI Y +I+G+CK+G++ W+LFCSL + PNVVTYN MI
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
GLC+ + +A L M+E+ PD T++ LI +R + + EL+ +M+ + +
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 533
Query: 556 DASIVSIVVDLL 567
DAS + +V ++L
Sbjct: 534 DASTIGLVANML 545
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 226/441 (51%), Gaps = 6/441 (1%)
Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
P+ FN L+ + + +L K++ G N+ TYN LIN CR +AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
+M E P+ VT S++++G C + A AL QM + PD +T+ +L
Sbjct: 68 LGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
IHGL N +EA L M+ +G QP++VT+ V+++ LCK +D A LL+ M +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
+ +NT++D C ++ A LF ME+ G + + V+Y+ LI+ C +A
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
L +M+ K I P +VT+N L + + A KL D+M + + D TY + I+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
+ + +A ++F + C D+ YN LI G CKS R++ ELF + H LV + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
TY +IQGL +DG D A+ +F M + PD++T+ +L+ G + K E+ M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 549 KEKKVMPDASIVSIVVDLLVK 569
++ ++ D I + +++ + K
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCK 442
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 176/353 (49%)
Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
P + +N L+ + ++ L +M G+ ++ T+N++++ C+ ++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
L M++ G P+ T ++L++G+C +I+ A L M MG + D +++ LI+G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
+ + EA++L MV +G +P +VTY + GL + ++ A L ++M+ + AD
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
+ T ID LCK ++ +A+ LF+ + ++ Y+ LI LC GR A +L +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
+ PN+VT+N +I +G+ +A L DM + + PD+ T++ LI+GF +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
K ++ M K PD + ++ K++ F +G VG++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 136/267 (50%)
Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
MV+ P+ +N L+ M K + L M+ +G H+ +YNILIN +C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
+ AL+L +M+ G +P++VT ++L G ++ A+ L D+M G DT T+TT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
I GL + EAV L + C+ ++ Y +++GLCK G + A+ L +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
+ +VV +N +I LC +D A +LF +ME P+V+T+ LI S +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
+LL M EKK+ P+ + ++D VK
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVK 267
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%)
Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
MV P++ +N L + ++ + + + L ++MQR G++ + TY I+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
I A+ L + L E I + L++G C R+ A L + P+ +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
+I GL + +A L M + P+++T+ ++++G + + LL+KM+ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 553 VMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
+ D I + ++D L K +L F E +G
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/598 (35%), Positives = 326/598 (54%), Gaps = 47/598 (7%)
Query: 5 SCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSP 64
SC R FS S V +R+ R G ++ I ++A +F M R P P
Sbjct: 22 SCYGRVFSSVSDGKGK---------VSYRE-RLRSGIVD-IKEDDAVDLFQEMTRSRPRP 70
Query: 65 PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
+ F+ L + +A+ K YD ++ G+ NLYT +I+INC C+ ++SL F A
Sbjct: 71 RLID-FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
G+I++ + P+ TF++LI GL E R+ EA L ++ G +P +IT N L+NGLC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 179 TGHTMIALNLFEEMANGNGE---------IGVVCKP--------------------NTVT 209
G A+ L + M + + V+CK + V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
YS IIDGLCK+G +D A LF +M+ + D++ Y +LI G C+A W++ +L +M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
+ + P VV F+ ++D K K+ EA L M+QRG+ P+ TY +L+DGFC +++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
+A + M S GC + ++NILINGYCK +++ L L+R+M +G+ VTYNTL
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
G E+ ++E A +LF EM V D +Y +DGLC NG +A+E+F + K E
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
LDI YN +I G+C + ++ AW+LFCSLP + P+V TYNIMI GLC G + +A L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
F MEE+ +P+ T+++LI + + +K +L+ ++K DAS V +VVD+L
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 225/471 (47%), Gaps = 7/471 (1%)
Query: 111 RVSLGFIAFGRILRSCFTPNA-ATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
R +L +GR+ S ++ ++ + + +A LF ++ P +I +
Sbjct: 16 RTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDF 75
Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
+ L + + RT + L+L ++M E+ + N T S +I+ C+ + A +
Sbjct: 76 SRLFSVVARTKQYDLVLDLCKQM-----ELKGIAH-NLYTLSIMINCCCRCRKLSLAFSA 129
Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
++ PD VT+++LI+GLC +EA L M++ G +P+++T N +++ LC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
N K+ +A L+D MV+ G +PN TY ++ C G+ A EL ME K D V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
Y+I+I+G CK+ ++ A +L+ EM KG K ++ Y TL G + + KL +M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
+ + D ++ ID K G + EA EL + + D Y LIDG CK +L
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
A + + PN+ T+NI+I G C +D +LF M D +T++ LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
GF + + EL +M ++V PD I++D L N K+L F
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 199/405 (49%), Gaps = 9/405 (2%)
Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNS 247
+F +++G G++ S I+D KE D A LF +M P ++ ++
Sbjct: 27 VFSSVSDGKGKVSY----RERLRSGIVD--IKE---DDAVDLFQEMTRSRPRPRLIDFSR 77
Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
L + ++ L +M +G+ ++ T +++++ C+ RK+ A + +++ G
Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
P+ T++TL++G CL G+++ A EL M MG K ++ N L+NG C N +V +A+
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
L MV G +P VTY + + + Q A++L +M+ + D Y+ IDGL
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
CK+G + A LF + I + DI Y LI G C +GR +L + + P+V
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
V ++ +I +G++ +A +L +M + +PD +T+ LI GF + N+ K N +L
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGES 592
M K P+ +I+++ K + L F +G V ++
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 43/301 (14%)
Query: 25 FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLA-----SLAK 79
FS+L+ D +EG + EA + M++ SP V+ +++ L K
Sbjct: 320 FSALI----DCFVKEGKLR-----EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 80 NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIK 139
H + + G PN+ T+NILIN +CK + G F ++ + T+N+LI+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 140 GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEI 199
G ++ A LF ++ + P++++Y L++GLC G AL +FE++ E+
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 200 GV---------VC--------------------KPNTVTYSTIIDGLCKEGFVDKAKALF 230
+ +C KP+ TY+ +I GLCK+G + +A LF
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 231 LQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKN 290
+M+++ +P+ TYN LI D ++ +L E+ G T +++D L
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Query: 291 R 291
R
Sbjct: 611 R 611
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 328/589 (55%), Gaps = 51/589 (8%)
Query: 21 FRSNFSSLLVHFRD-LTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
+ +F+S +R+ L R DI I ++A +F M++ P P V FN LL+++AK
Sbjct: 39 WERSFASASGDYREILRNRLSDI--IKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAK 95
Query: 80 NKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--------- 124
++ ++ G+ +LYTY+I INCFC+ ++SL ++++
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 125 -------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
C + P+ TF +LI GL ++ EA AL ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
GC+P+++TY T++NGLC+ G +AL+L ++M G E VV Y+TIIDGLC
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------IYNTIIDGLC 269
Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
K +D A LF +M ++ I PDV TY+SLI LC+ W++A RL +M+++ + P+VV
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
TF+ ++D K K+ EA +L D M++R + P+ TY++L++GFC+ +++ A+ +F M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
S C + V+Y+ LI G+CK K VEE + L+REM +G+ VTY TL G F+
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
++A +F +M GV + TY +DGLCKNG + +A+ +F L+ E DI YN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
I+G+CK+G+++ WELFC+L + PNV+ YN MI G C G ++A L M+E+
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
P+ T++ LI +R + EL+ +M+ DAS + +V ++L
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 247/507 (48%), Gaps = 14/507 (2%)
Query: 63 SPPPVSSFNILLASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
+PP V SF L S + + + A+G + IL N I +V FG +
Sbjct: 23 NPPTVPSFFNLCGSGCWERSFAS---ASGDYRE-----ILRNRLSDIIKVDDAVDLFGDM 74
Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
++S P+ FN L+ + ++ +L +++ G ++ TY+ IN CR
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
+AL + +M E P+ VT S++++G C + A AL QM + PD
Sbjct: 135 SLALAVLAKMMKLGYE------PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
T+ +LIHGL N +EA L +M+ +G QP +VT+ +++ LCK +D A LL
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
M + + + YNT++DG C ++ A LF M++ G + D +Y+ LI+ C
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
+A L +M+ + I P VVT++ L + ++ A KL+DEM + + D TY++
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV 482
I+G C + + EA +F + C ++ Y+ LI G CK+ R++ ELF +
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 483 LVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVN 542
LV N VTY +I G D A+ +F M P+++T+++L+ G + + +K
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 543 ELLHKMKEKKVMPDASIVSIVVDLLVK 569
+ ++ + PD +I+++ + K
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 229/441 (51%), Gaps = 6/441 (1%)
Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
++ +A LF + P+++ +N L++ + + + ++L E+M +G+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SH 116
Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
+ TYS I+ C+ + A A+ +M PD+VT +SL++G CH+ ++A L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
+M++ G +P TF ++ L + K EA L+D MVQRG +P+ TY T+++G C
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
G I+ A L ME + D V YN +I+G CK K +++AL+L+ EM +KGI+P V TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
++L L + A +L +M + + T++ ID K G ++EA +L+ +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
+ DI Y+ LI+G C RL A +F + PNVVTY+ +I+G C ++++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
+LF +M + + +T+ LIHGF + + + +M V P+ +I++D
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 566 LLVKNEISLKSLPSFLVQERQ 586
L KN K++ F +R
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRS 497
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 183/370 (49%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
VD A LF M P +V +N L+ + N + L +M G+ + T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
++ C+ ++ A +L M++ G P+ T ++L++G+C +I+ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
K D ++ LI+G + + EA++L +MV +G +P +VTY T+ GL + ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L +M++ + AD Y T IDGLCK ++ +A+ LF + D+ Y+ LI L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C GR A L + + PNVVT++ +I +G++ +A L+ +M + + PD+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
T+ LI+GF + + + M K P+ S ++ K + + + F
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 583 QERQGEVGES 592
++G VG +
Sbjct: 424 MSQRGLVGNT 433
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNIL 102
EA ++D M++ P + +++ L+ L + KH + + FPN+ TY+ L
Sbjct: 346 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
I FCK RV G F + + N T+ +LI G A +F ++ + G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE---------IGVVCK--------- 204
PN++TYN L++GLC+ G A+ +FE + E I +CK
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 205 -----------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
PN + Y+T+I G C++G ++A +L +MK++ P+ TYN+LI
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
D + L EM G T ++ + L R
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 112/226 (49%)
Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
+V++A+ L+ +MV P++V +N L + ++++ E + L ++MQ G++ D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
FI+ C+ + A+ + + L E DI + L++G C S R+ A L +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
P+ T+ +I GL + +A L M + PD++T+ +++G + +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
LL KM++ K+ D I + ++D L K + +L F + +G
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/589 (34%), Positives = 332/589 (56%), Gaps = 54/589 (9%)
Query: 21 FRSNFSSLLVHFRD-LTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAK 79
+ +F+S +R+ L R DI I ++A +F M++ P P V FN LL+++AK
Sbjct: 39 WERSFASASGDYREILRNRLSDI--IKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAK 95
Query: 80 NKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR--------- 124
++ ++ G+ +LYTY+I INCFC+ ++SL ++++
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 125 -------SC-------------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
C + P+ TF +LI GL ++ EA AL ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
GC+P+++TY T++NGLC+ G +ALNL +M K N V ++TIID LC
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLC 269
Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
K V+ A LF +M+ + I P+VVTYNSLI+ LC+ W++A RL M+++ + P+VV
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
TFN ++D K K+ EA +L + M+QR + P+ TYN L++GFC+ +++ A+++F M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
S C + +YN LING+CK K VE+ + L+REM +G+ VTY T+ G F+
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
+ A +F +M + V D TY+ + GLC G + A+ +F+ L+ + EL+I YN +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
I+G+CK+G++ AW+LFCSL + P+VVTYN MI GLC+ + +A DLF M+E+
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
P+ T++ LI +R + + EL+ +M+ + DAS +S+V ++L
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 187/370 (50%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
VD A LF M P +V +N L+ + N + L +M G+ + T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
++ C+ ++ A +L M++ G P+ T ++L++G+C +I+ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
K D ++ LI+G + + EA++L +MV +G +P +VTY T+ GL + ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L ++M+ + A+ + T ID LCK ++ AV+LF + ++ YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C GR A L ++ + PNVVT+N +I +G++ +A L +M + + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
IT+++LI+GF N + ++ M K +P+ + +++ K + + F
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 583 QERQGEVGES 592
++G VG +
Sbjct: 424 MSQRGLVGNT 433
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 159/332 (47%), Gaps = 23/332 (6%)
Query: 261 AKRLFIEMMDQGV--QPSVVTFNVI----------------MDELCKNR-----KMDEAS 297
AKRLF+ QG+ P+V +F + E+ +NR K+D+A
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
L MV+ P+ +N L+ M K L M+++G HD +Y+I IN +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
C+ ++ AL++ +M+ G +P +VT ++L G ++ A+ L D+M G DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
T+TT I GL + EAV L + C+ D+ Y +++GLCK G + A L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
+ + NVV +N +I LC ++ A DLF +ME P+V+T++ LI+
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
S + LL M EKK+ P+ + ++D K
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 16/250 (6%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
+EA +F +M+ P + ++N L+ K K + ++ GL N TY
Sbjct: 380 DEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
+I F + G + F +++ + + T++ L+ GL + ++ A +F L+
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
E N+ YNT+I G+C+ G A +LF ++ KP+ VTY+T+I GLC +
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKR 549
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
+ +A LF +MK++ P+ TYN+LI D + L EM G T +
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Query: 282 VIMDELCKNR 291
++ + L R
Sbjct: 610 LVTNMLHDGR 619
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 306/538 (56%), Gaps = 50/538 (9%)
Query: 25 FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
FSS +R++ R G ++ + ++A +F M++ P P + FN LL+++AK K +D
Sbjct: 46 FSSGSGDYREIL-RNG-LHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFD 102
Query: 85 ------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR-------------- 124
++ G+ NLYTYNILINCFC+ ++SL G++++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 125 --SC-------------------FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
C + P+ TF +LI GL ++ EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
PN++TY ++NGLC+ G +A NL +M E N V YST+ID LCK
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHE 276
Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
D A LF +M+++ + P+V+TY+SLI LC+ W++A RL +M+++ + P+VVTFN +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
+D K K+ EA +L D M++R + P+ TY++L++GFC+ +++ A+ +F M S C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
+ V+YN LING+CK K ++E + L+REM +G+ VTY TL G F+ ++A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
+F +M DGV + TY T +DGLCKNG + +A+ +F L+ K E I YN +I+G+C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
K+G+++ W+LFCSL + P+V+ YN MI G C G ++A LF M E+ PD
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 227/451 (50%), Gaps = 6/451 (1%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
FG +++S P+ FN L+ + + +L K++ G N+ TYN LIN CR
Sbjct: 73 FGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 132
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+AL L +M E P+ VT S++++G C + A AL QM +
Sbjct: 133 RSQISLALALLGKMMKLGYE------PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PD +T+ +LIHGL N +EA L M+ +G QP++VT+ V+++ LCK +D A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
LL+ M + N Y+T++D C + A LF ME+ G + + ++Y+ LI+ C
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+ +A L +M+ + I P VVT+N L + ++ A KL+DEM + + D
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY++ I+G C + + EA +F + C ++ YN LI+G CK+ R+ ELF +
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
LV N VTY +I G D A+ +F M + P+++T++ L+ G + +
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
K + ++ K+ P +I+++ + K
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 245/486 (50%), Gaps = 15/486 (3%)
Query: 88 NATGLF---------PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLI 138
+A GLF P+++ +N L++ K+ + L ++ R + N T+N LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 139 KGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE 198
S+I A AL K+ G EP+++T ++L+NG C A+ L ++M E
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV----E 183
Query: 199 IGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDW 258
+G +P+T+T++T+I GL +A AL +M P++VTY +++GLC D
Sbjct: 184 MGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
+ A L +M ++ +VV ++ ++D LCK R D+A L M +GVRPN TY++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
+ C + + A L M + V++N LI+ + K ++ EA LY EM+ + I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
P + TY++L G +++ A +F+ M + TY T I+G CK I E VE
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
LFR + + Y LI G ++ A +F + + PN++TYN ++ GLC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
+G+++KA +F ++ + P + T++++I G + + +L + K V PD
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 559 IVSIVV 564
I + ++
Sbjct: 542 IYNTMI 547
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 239/473 (50%), Gaps = 12/473 (2%)
Query: 115 GFIAFGRILRSCFTPNAATFNSLIK-GLHAESRIMEAAALFTKLKAFGCEPNVITYNTLI 173
G +GR F+ + + +++ GLH+ ++ +A LF + P++ +N L+
Sbjct: 38 GMCYWGR----AFSSGSGDYREILRNGLHS-MKLDDAIGLFGGMVKSRPLPSIFEFNKLL 92
Query: 174 NGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM 233
+ + + + ++L E+M +G+ N TY+ +I+ C+ + A AL +M
Sbjct: 93 SAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 234 KDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKM 293
P +VT +SL++G CH ++A L +M++ G +P +TF ++ L + K
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 294 DEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNIL 353
EA L+D MVQRG +PN TY +++G C G I+ A L ME+ + + V Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 354 INGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGV 413
I+ CK + ++AL+L+ EM +KG++P V+TY++L L + A +L +M +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 414 AADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWE 473
+ T+ ID K G ++EA +L+ + + DI Y+ LI+G C RL A
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 474 LFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
+F + PNVVTYN +I G C ++D+ +LF +M + + +T+ LIHGF
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 534 RINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQ 586
+ + + +M V P+ + ++D L KN K++ F +R
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 181/370 (48%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
+D A LF M P + +N L+ + ++ L +M G+ ++ T+N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+++ C+ ++ A LL M++ G P+ T ++L++G+C +I+ A L M MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
+ D +++ LI+G + + EA++L MV +G +P +VTY + GL + ++ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L ++M+ + A+ Y+T ID LCK + +A+ LF + ++ Y+ LI L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C R A L + + PNVVT+N +I +G++ +A L+ +M + + PD+
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
T+ LI+GF + + + M K P+ + +++ K + + + F
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 583 QERQGEVGES 592
++G VG +
Sbjct: 426 MSQRGLVGNT 435
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 1/236 (0%)
Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
IL NG + ++++A+ L+ MV P++ +N L + ++ + + + L ++MQR
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
G++ + TY I+ C+ I A+ L + L E I + L++G C R+ A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
L + P+ +T+ +I GL + +A L M + P+++T+ ++++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
+ + LL+KM+ K+ + I S V+D L K +L F E +G
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/569 (34%), Positives = 315/569 (55%), Gaps = 28/569 (4%)
Query: 6 CCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPP 65
C RSF+ AS+ R N S ++ D+ + ++A +F M++ P P
Sbjct: 29 CWERSFAGASS--DDCRENLSRKVLQ---------DLKL---DDAIGLFGDMVKSRPFPS 74
Query: 66 PVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
V F+ LL+++AK +D ++ G+ NLYTY+I IN FC+ ++SL
Sbjct: 75 IVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
G++++ + P+ T NSL+ G +RI EA AL ++ G +P+ +T+ TL++GL +
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
A+ L E M C+P+ VTY +I+GLCK G D A L +M+ I
Sbjct: 194 NKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
DVV YN++I GLC ++A LF +M +G++P V T+N ++ LC + +ASRL
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYC 358
L M+++ + P+ +N L+D F GK+ AE+L+ M +S C D V+YN LI G+C
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
K K VEE + ++REM +G+ VTY TL G F+ ++A +F +M DGV D
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY +DGLC NG + A+ +F ++ +LDI Y +I+ LCK+G+++ W+LFCSL
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
+ PNVVTY M+ G C G ++A LF++M+E+ P+ T++ LI +R +
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLL 567
+ EL+ +M+ DAS +V ++L
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 214/425 (50%), Gaps = 7/425 (1%)
Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
++ +A LF + P+++ ++ L++ + + + ++L E+M N +G+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 108
Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
N TYS I+ C+ + A A+ +M P +VT NSL++G CH N +EA L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
+M++ G QP VTF ++ L ++ K EA L++ MV +G +P+ TY +++G C
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
G+ + A L ME + D V YN +I+G CK K +++A L+ +M +KGIKP V TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLR 444
N L L + A +L +M + D + ID K G ++EA +L+ ++
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
C D+ AYN LI G CK R++ E+F + LV N VTY +I G D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
A+ +F M + PD++T+++L+ G + M+++ + D + ++
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 565 DLLVK 569
+ L K
Sbjct: 469 EALCK 473
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 184/367 (50%), Gaps = 1/367 (0%)
Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
P+ V +S ++ + K D +L QM++ I+ ++ TY+ I+ C + + A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
+MM G PS+VT N +++ C ++ EA L+D MV+ G +P+ T+ TL+ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
K + A L M GC+ D V+Y +ING CK E + AL+L +M I+ VV
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
YNT+ GL + ++ A LF++M+ G+ D TY I LC G +A L +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMIQGLCNDGQM 503
D+ +N LID K G+L A +L+ + P+VV YN +I+G C ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
++ ++F +M + + +T+ LIHGF + + + +M V PD +I+
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 564 VDLLVKN 570
+D L N
Sbjct: 433 LDGLCNN 439
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 145/284 (51%)
Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
++ ++ K+D+A L MV+ P+ ++ L+ M K + L M+++G H
Sbjct: 49 KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 108
Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
+ +Y+I IN +C+ ++ AL++ +M+ G P++VT N+L G +++ A+ L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
D+M G DT T+TT + GL ++ EAV L + + C+ D+ Y +I+GLCK
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
G A L + G + +VV YN +I GLC MD A DLF ME PDV T+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
+ LI S + LL M EK + PD + ++D VK
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 65 PPVSSFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
P + FN L+ + K K YD + + FP++ YN LI FCK RV G
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
F + + N T+ +LI G A +F ++ + G P+++TYN L++GLC
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 178 RTGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTV 208
G+ AL +FE M + ++ +V KPN V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
TY+T++ G C++G ++A ALF++MK++ P+ TYN+LI D + L EM
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Query: 269 MDQGVQPSVVTFNVIMDELCKNR 291
G TF ++ + L R
Sbjct: 558 RSCGFAGDASTFGLVTNMLHDGR 580
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/598 (34%), Positives = 307/598 (51%), Gaps = 56/598 (9%)
Query: 34 DLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK-----HYDTRLN 88
+L + G + ++A FDYM+R P V ++ + N+ ++
Sbjct: 74 ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME 133
Query: 89 ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRI- 147
+ N+Y++NILI CFC ++S FG++ + F P+ TFN+L+ GL E RI
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS 193
Query: 148 --------------MEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
+EA ALF ++ G P VIT+NTLINGLC G + A L +M
Sbjct: 194 EALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253
Query: 194 NGNGEIGVVC-----------------------------KPNTVTYSTIIDGLCKEGFVD 224
I VV KP+ V YS IID LCK+G
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 225 KAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIM 284
A+ LF +M ++ I P+V TYN +I G C W++A+RL +M+++ + P V+TFN ++
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 285 DELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCK 344
K K+ EA +L D M+ R + P+ TYN+++ GFC + + A+ +F M S
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---- 429
Query: 345 HDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKL 404
D V++N +I+ YC+ K V+E + L RE+ +G+ TYNTL G E+ + A L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 405 FDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCK 464
F EM GV DT T + G C+N + EA+ELF +++ K +LD AYN +I G+CK
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 465 SGRLKFAWELFCSLP-HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
++ AW+LFCSLP HGV P+V TYN+MI G C + A LF M++N PD
Sbjct: 550 GSKVDEAWDLFCSLPIHGV-EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
T++ LI G ++ E K EL+ +M+ DA + +V DL+ + KS L
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLD-KSFSDML 665
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 204/429 (47%), Gaps = 27/429 (6%)
Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
N +I R +A++L+ +M EI + N +++ +I C + + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKM-----EIRRI-PLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF-----------IEMMDQ----GVQ 274
F ++ PDVVT+N+L+HGLC + +EA LF + + DQ G+
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
P V+TFN +++ LC ++ EA+ L++ MV +G+ + TY T+++G C MG A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
ME K D V Y+ +I+ CK+ +A L+ EM+ KGI P V TYN + G
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL-DIQ 453
+ A +L +M + D T+ I K G + EA +L + + +C D
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-LHRCIFPDTV 402
Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
YN +I G CK R A +F + P+VVT+N +I C ++D+ L ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
+ T++ LIHGF ++ + +L +M V PD +I++ +NE
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 574 LKSLPSFLV 582
++L F V
Sbjct: 519 EEALELFEV 527
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 322 bits (824), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 274/487 (56%), Gaps = 51/487 (10%)
Query: 37 TREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNAT 90
TR DI + N+A +F M++ P P V FN LL+++ K K YD ++
Sbjct: 59 TRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 91 GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
G+ +LYT+NI+INCFC +VSL G++L+
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK-------------------------- 148
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
G EP+ +T +L+NG CR A++L ++M EIG KP+ V Y
Sbjct: 149 ---------LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVAY 193
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
+ IID LCK V+ A F +++ + I P+VVTY +L++GLC+++ W++A RL +M+
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
+ + P+V+T++ ++D KN K+ EA L + MV+ + P+ TY++L++G CL +I+
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
A ++F M S GC D VSYN LING+CK K VE+ + L+REM +G+ VTYNTL
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
G F+ V+ A + F +M G++ D TY + GLC NG + +A+ +F ++ + +L
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
DI Y +I G+CK+G+++ AW LFCSL L P++VTY M+ GLC G + + L+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 511 LDMEENA 517
M++
Sbjct: 494 TKMKQEG 500
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 219/411 (53%), Gaps = 6/411 (1%)
Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
++ +A LF+ + P+++ +N L++ + + + ++L ++M +G+ +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGI--RN 118
Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
+ T++ +I+ C V A ++ +M PD VT SL++G C N ++A L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
+M++ G +P +V +N I+D LCK +++++A + ++G+RPN TY L++G C
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
+ + A L M + ++Y+ L++ + KN +V EA L+ EMV I P +VTY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
++L GL +++ A ++FD M G AD +Y T I+G CK + + ++LFR +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
+ YN LI G ++G + A E F + + P++ TYNI++ GLC++G+++K
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
A +F DM++ D++T+ +I G + + + L + K + PD
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 198/380 (52%), Gaps = 6/380 (1%)
Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
A++LF +M P+ V ++ ++ + K D +L +M+ I D+ T
Sbjct: 69 AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
+N +I+ C + A + +M+ G +P VT +++ C+ ++ +A L+D MV
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
+ G +P+ YN ++D C ++N A + F +E G + + V+Y L+NG C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
+A L +M+ K I P V+TY+ L + +V A +LF+EM R + D TY++ I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
+GLC + I EA ++F + C D+ +YN LI+G CK+ R++ +LF + LV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
N VTYN +IQG G +DKA++ F M+ +PD+ T+++L+ G E K +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 545 LHKMKEKKVMPDASIVSIVV 564
M+++++ D + V+
Sbjct: 423 FEDMQKREMDLDIVTYTTVI 442
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 185/365 (50%), Gaps = 1/365 (0%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
++ A LF M P +V +N L+ + ++ L +M G++ + TFN+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+++ C ++ A +L M++ G P+ T +L++GFC +++ A L M +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
K D V+YN +I+ CK K V +A ++E+ KGI+P VVTY L GL + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
+L +M + + + TY+ +D KNG ++EA ELF + + + DI Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C R+ A ++F + + +VV+YN +I G C +++ LF +M + +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL- 581
+T++ LI GF + + K E +M + PD +I++ L N K+L F
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 582 VQERQ 586
+Q+R+
Sbjct: 426 MQKRE 430
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%)
Query: 276 SVVTFNVIMDELCKNR----KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
S V+ + + L K R K+++A L MV+ P+ +N L+ + K +
Sbjct: 45 SSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVV 104
Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
L ME +G ++D ++NI+IN +C +V ALS+ +M+ G +P VT +L G
Sbjct: 105 ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG 164
Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
++V A+ L D+M G D Y ID LCK + +A + F+ + +
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
+ Y L++GLC S R A L + + PNV+TY+ ++ +G++ +A++LF
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 512 DMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
+M + PD++T+ LI+G + + N++ M K + D
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 315 bits (807), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 296/566 (52%), Gaps = 43/566 (7%)
Query: 38 REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TG 91
+EGD ++A+ + ML P V ++N ++A+L K + D + G
Sbjct: 208 KEGD-----SDKAYSTYHEMLD-RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 92 LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEA 150
+ P+ TYN +++ +C G+ I F + +RS P+ T++ L+ L R MEA
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEA-IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG-------------- 195
+F + G +P + TY TL+ G G + L + M NG
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 196 ---NGEIGVV-----------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
G++ PN VTY +I LCK G V+ A F QM DE ++P
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
+ YNSLIHGLC N W A+ L +EM+D+G+ + + FN I+D CK ++ E+ +L +
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
LMV+ GV+PN TYNTL++G+CL GK++ A +L M S+G K + V+Y+ LINGYCK
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
+E+AL L++EM S G+ P ++TYN + GLF+ + A +L+ + G + TY
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
+ GLCKN +A+++F+ L ++ +L+ + +N +ID L K GR A +LF +
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
LVPN TY +M + + G +++ LFL ME+N D + ++ ++ E ++
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 542 NELLHKMKEKKVMPDASIVSIVVDLL 567
L + EK +AS S+ +DLL
Sbjct: 741 GTYLSMIDEKHFSLEASTASLFIDLL 766
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/570 (28%), Positives = 285/570 (50%), Gaps = 48/570 (8%)
Query: 59 RMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCFCKIGRV 112
R SPP V S+ ++ K +K Y T + G+ P++ TYN +I CK +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 113 SLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTL 172
++++ P+ T+NS++ G + + EA K+++ G EP+V+TY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 173 INGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDG---------------- 216
++ LC+ G M A +F+ M KP TY T++ G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRG------LKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 217 ----------------LC---KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAND 257
+C K+G VD+A +F +M+ + +NP+ VTY ++I LC +
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 258 WNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNT 317
+A F +M+D+G+ P + +N ++ LC K + A L+ M+ RG+ N +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 318 LMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKG 377
++D C G++ +E+LF M +G K + ++YN LINGYC +++EA+ L MVS G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
+KP VTY+TL G +I ++E AL LF EM+ GV+ D TY + GL + A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
EL+ + ++++ YN ++ GLCK+ A ++F +L L T+NIMI L
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
G+ D+A+DLF+ N P+ T+ ++ I ++++L M++ D+
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDS 721
Query: 558 SIVSIVV-DLLVKNEISLKSLPSFLVQERQ 586
+++ +V +LL + EI+ ++ E+
Sbjct: 722 GMLNFIVRELLQRGEITRAGTYLSMIDEKH 751
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/604 (27%), Positives = 266/604 (44%), Gaps = 122/604 (20%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYD--TRLNATGLFPNLYTYN 100
+A +FD +LR + N LA +A++ Y+ R A + P+L TY
Sbjct: 33 DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
ILI C C+ GR+ LGF A G +++ F +A F L+K
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLK--------------------- 130
Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
GLC T A+++ E+G C PN +Y+ ++ GLC E
Sbjct: 131 --------------GLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNILLKGLCDE 171
Query: 221 GFVDKAKALFLQMKDENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
+A L M D+ PDVV+Y ++I+G D ++A + EM+D+G+ P V
Sbjct: 172 NRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDV 231
Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
VT+N I+ LCK + MD+A +L+ MV+ GV P+ TYN+++ G+C G+ A
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG------ 391
M S G + D V+Y++L++ CKN EA ++ M +G+KP + TY TL G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 392 LFEIH-----------------------------QVEHALKLFDEMQRDGVAADTRTYTT 422
L E+H +V+ A+ +F +M++ G+ + TY
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL-------------------- 462
I LCK+G + +A+ F + YN LI GL
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 463 ---------------CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
CK GR+ + +LF + + PNV+TYN +I G C G+MD+A
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
L M P+ +T+ LI+G+ +I+ L +M+ V PD +I++ L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 568 VKNE 571
+
Sbjct: 592 FQTR 595
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 222/470 (47%), Gaps = 23/470 (4%)
Query: 131 AATFNSLIKGLHAESRIMEAAAL--FTKLKAFGCE---PNVITYNTLINGLCRTGHTMIA 185
A+ L + L +R AAA+ + ++ G + P++ TY LI CR G
Sbjct: 47 GASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGR---- 102
Query: 186 LNLFEEMANGNGEIGVVCKP----NTVTYSTIIDGLCKEGFVDKAKALFLQ-MKDENINP 240
L+L G +G V K + + ++ ++ GLC + A + L+ M + P
Sbjct: 103 LDL------GFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 156
Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ---GVQPSVVTFNVIMDELCKNRKMDEAS 297
+V +YN L+ GLC N EA L M D G P VV++ +++ K D+A
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216
Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
M+ RG+ P+ TYN+++ C +++A E+ +M G D ++YN +++GY
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
C + + +EA+ ++M S G++P VVTY+ L L + + A K+FD M + G+ +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336
Query: 418 RTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
TY T + G G ++E L + D ++ LI K G++ A +F
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Query: 478 LPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINE 537
+ L PN VTY +I LC G+++ A F M + +P I ++ LIHG N+
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 538 PSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
+ EL+ +M ++ + + + ++D K ++S F + R G
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 194/427 (45%), Gaps = 52/427 (12%)
Query: 49 EAFCIFDYMLR--MHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
E + D M+R +HP F+IL+ + AK D +++ GL PN TY
Sbjct: 354 EMHGLLDLMVRNGIHPDH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL------------------- 141
+I CK GRV + F +++ +P +NSLI GL
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 142 ---------------H-AESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIA 185
H E R++E+ LF + G +PNVITYNTLING C G A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
+ L +G + V KPNTVTYST+I+G CK ++ A LF +M+ ++PD++TY
Sbjct: 531 MKLL------SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
N ++ GL AK L++ + + G Q + T+N+I+ LCKN+ D+A ++ +
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 644
Query: 306 RGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEE 365
++ A T+N ++D +G+ + A++LF + S G + +Y ++ +EE
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
Query: 366 ALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFID 425
L+ M G N + L + ++ A + + + T + FID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Query: 426 GLCKNGY 432
L Y
Sbjct: 765 LLSGGKY 771
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 308 bits (789), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 273/494 (55%), Gaps = 54/494 (10%)
Query: 33 RDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------R 86
R +T+ +N+ + FC M++ P P V F+ +L+ +AK+K+YD
Sbjct: 39 RTFSTKRSSMNLEEEIDLFC---KMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHH 94
Query: 87 LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
+ G+ +LY+YNI+INC C+ SR
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRC-----------------------------------SR 119
Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
+ A ++ K+ FG EP+V+T ++LING C+ A++L +M E+G +P+
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME----EMGF--RPD 173
Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
V Y+TIIDG CK G V+ A LF +M+ + + D VTYNSL+ GLC + W++A RL
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
+M+ + + P+V+TF ++D K K EA +L + M +R V P+ TYN+L++G C+ G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
+++ A+++ M + GC D V+YN LING+CK+K V+E L+REM +G+ +TYN
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
T+ G F+ + + A ++F M + RTY+ + GLC N + +A+ LF ++
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
+ ELDI YN +I G+CK G ++ AW+LF SL L P+VV+Y MI G C Q DK+
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 507 RDLFLDMEENAAAP 520
L+ M+E+ P
Sbjct: 471 DLLYRKMQEDGLLP 484
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 230/437 (52%), Gaps = 9/437 (2%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
F ++++S P+ F+ ++ + +LF ++ G ++ +YN +IN LCR
Sbjct: 57 FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+IAL++ +M E P+ VT S++I+G C+ V A L +M++
Sbjct: 117 CSRFVIALSVVGKMMKFGYE------PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PDVV YN++I G C N+A LF M GV+ VT+N ++ LC + + +A+R
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
L+ MV R + PN T+ ++D F GK + A +L+ M D +YN LING C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+ V+EA + MV+KG P VVTYNTL G + +V+ KLF EM + G+ DT
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY T I G + G A E+F + +I+ Y+ L+ GLC + R++ A LF ++
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
+ ++ TYNI+I G+C G ++ A DLF + PDV+++ +I GF R +
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 539 SKVNELLHKMKEKKVMP 555
K + L KM+E ++P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 201/379 (53%), Gaps = 10/379 (2%)
Query: 198 EIGVVCK-------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
EI + CK P+ V +S ++ + K D +LF M+ I D+ +YN +I+
Sbjct: 53 EIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN 112
Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
LC + + A + +MM G +P VVT + +++ C+ ++ +A L+ M + G RP
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
+ YNT++DG C +G +N A ELF ME G + D V+YN L+ G C + +A L
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
R+MV + I P V+T+ + + + A+KL++EM R V D TY + I+GLC +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
G + EA ++ + C D+ YN LI+G CKS R+ +LF + LV + +TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
N +IQG G+ D A+++F M+ + P++ T+ +L++G K L M++
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 551 KKVMPDASIVSIVVDLLVK 569
++ D + +IV+ + K
Sbjct: 410 SEIELDITTYNIVIHGMCK 428
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 212/410 (51%), Gaps = 11/410 (2%)
Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNT 207
E LF K+ P+++ ++ +++ + ++ + + ++LF M G G +
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGH-------DL 104
Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
+Y+ +I+ LC+ A ++ +M PDVVT +SLI+G C N +A L +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
M + G +P VV +N I+D CK +++A L D M + GVR +A TYN+L+ G C G+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
+ A L M + +++ +I+ + K + EA+ LY EM + + P V TYN+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
L GL +V+ A ++ D M G D TY T I+G CK+ + E +LFR +
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
D YN +I G ++GR A E+F + PN+ TY+I++ GLC + +++KA
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 401
Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
LF +M+++ D+ T++++IHG +I +L + K + PD
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 35/300 (11%)
Query: 293 MDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNI 352
++E L M+Q P+ ++ ++ + LF ME G HD SYNI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 353 -----------------------------------LINGYCKNKEVEEALSLYREMVSKG 377
LING+C+ V +A+ L +M G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 378 IKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAV 437
+P VV YNT+ G +I V A++LFD M+RDGV AD TY + + GLC +G +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 438 ELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGL 497
L R + + ++ + +ID K G+ A +L+ + + P+V TYN +I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 498 CNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDA 557
C G++D+A+ + M PDV+T++ LI+GF + + +L +M ++ ++ D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 262/474 (55%), Gaps = 48/474 (10%)
Query: 45 ITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYT 98
I ++A +F M + P P + F+ LL+++AK +D ++ G+ NLYT
Sbjct: 57 IELDDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 99 YNILINCFC----------------KIG-------------------RVSLGFIAFGRIL 123
YNILINCFC K+G R+S +++
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
+ P+ TF +LI GL ++ EA AL ++ GC+P+++TY ++NGLC+ G T
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
+ALNL +M E N V YST+ID LCK D A LF +M+++ + P+V+
Sbjct: 236 LALNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
TY+SLI LC+ W++A RL +M+++ + P++VTF+ ++D K K+ +A +L + M
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
++R + PN TY++L++GFC++ ++ A+++ M C + V+YN LING+CK K V
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
++ + L+REM +G+ VTY TL G F+ ++A +F +M GV + TY
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCS 477
+DGLCKNG + +A+ +F L+ E DI YN +I+G+CK+G+ K F +
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 226/438 (51%), Gaps = 6/438 (1%)
Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
+A LF + P++I ++ L++ + + + ++ E+M +G+ N
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLY 114
Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
TY+ +I+ C+ + A AL +M PD+VT NSL++G CH N ++A L +M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
++ G +P VTF ++ L + K EA L+D MVQRG +P+ TY +++G C G
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
+ A L ME+ + + V Y+ +I+ CK + ++AL+L+ EM +KG++P V+TY++L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
L + A +L +M + + T++ ID K G +++A +L+ +
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
+ +I Y+ LI+G C RL A ++ + +PNVVTYN +I G C ++DK +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
LF +M + + +T+ LIHGF + + + +M V P+ +I++D L
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 569 KNEISLKSLPSFLVQERQ 586
KN K++ F +R
Sbjct: 475 KNGKLAKAMVVFEYLQRS 492
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 222/451 (49%), Gaps = 6/451 (1%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
FG + +S P+ F+ L+ + ++ + K++ G N+ TYN LIN CR
Sbjct: 66 FGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCR 125
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+AL L +M E P+ VT +++++G C + A AL QM +
Sbjct: 126 CSRLSLALALLGKMMKLGYE------PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PD VT+ +LIHGL N +EA L M+ +G QP +VT+ +++ LCK D A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
LL+ M + N Y+T++D C + A LF ME+ G + + ++Y+ LI+ C
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+A L +M+ + I P +VT++ L + ++ A KL++EM + + +
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY++ I+G C + EA ++ + C ++ YN LI+G CK+ R+ ELF +
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
LV N VTY +I G D A+ +F M P+++T+++L+ G + +
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
+K + ++ + PD +I+++ + K
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 158/309 (51%)
Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
+ ++A LF M PS++ F+ ++ + K K D + M G+ N TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
L++ FC +++ A L G M +G + D V+ N L+NG+C + +A++L +MV
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
G KP VT+ TL GLF ++ A+ L D M + G D TY ++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
+ L + K E ++ Y+ +ID LCK A LF + + + PNV+TY+ +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
LCN G+ A L DM E P+++TF LI F++ + K +L +M ++ + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 557 ASIVSIVVD 565
S +++
Sbjct: 358 IFTYSSLIN 366
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 186/370 (50%)
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
+D A LF M P ++ ++ L+ + N ++ +M G+ ++ T+N+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+++ C+ ++ A LL M++ G P+ T N+L++GFC +I+ A L M MG
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
K D V++ LI+G + + EA++L MV +G +P +VTY + GL + + AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
L ++M+ + A+ Y+T ID LCK + +A+ LF + ++ Y+ LI L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
C GR A L + + PN+VT++ +I G++ KA L+ +M + + P++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLV 582
T+ LI+GF ++ + ++L M K +P+ + +++ K + K + F
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 583 QERQGEVGES 592
++G VG +
Sbjct: 419 MSQRGLVGNT 428
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 136/278 (48%)
Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
++D+A L +M Q P+ ++ L+ M K + ME +G H+ +YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
ILIN +C+ + AL+L +M+ G +P +VT N+L G +++ A+ L D+M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
G DT T+TT I GL + EAV L + C+ D+ Y +++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
L + + NVV Y+ +I LC D A +LF +ME P+VIT+ LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
S + LL M E+K+ P+ S ++D VK
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 106/226 (46%)
Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
E+++A+ L+ M P+++ ++ L + ++++ + + ++M+ G++ + TY
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
I+ C+ + A+ L + L E DI N L++G C R+ A L +
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
P+ VT+ +I GL + +A L M + PD++T+ +++G + +
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 542 NELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
LL+KM+ K+ + I S V+D L K +L F E +G
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 265/486 (54%), Gaps = 48/486 (9%)
Query: 42 INVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPN 95
I + +++ +F +M++ P P ++ F+ LL++++K K YD ++ G+ N
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 96 LYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT 155
L T NIL+NCFC+ ++SL G++++
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIK------------------------------- 144
Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
G EP+++T+ +L+NG CR AL +F++M +G+ KPN V Y+TIID
Sbjct: 145 ----LGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM------VGMGYKPNVVIYNTIID 194
Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
GLCK VD A L +M+ + I PDVVTYNSLI GLC + W++A R+ M + + P
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF 335
V TFN ++D K ++ EA + M++R + P+ TY+ L+ G C+ +++ AEE+F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 336 GSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEI 395
G M S GC D V+Y+ILINGYCK+K+VE + L+ EM +G+ VTY L G
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 396 HQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
++ A ++F M GV + TY + GLC NG I +A+ + ++ + DI Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
N +I G+CK+G + AW+++CSL L+P++ TY M+ GL G +A LF M+E
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 516 NAAAPD 521
+ P+
Sbjct: 495 DGILPN 500
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 227/432 (52%), Gaps = 6/432 (1%)
Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
P+ A F+ L+ + + L+ +++ G N+ T N L+N CR +AL+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
+M E P+ VT+ ++++G C+ V A +F QM P+VV YN++
Sbjct: 139 LGKMIKLGHE------PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
I GLC + + A L M G+ P VVT+N ++ LC + + +A+R++ M +R +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
P+ T+N L+D G+++ AEE + M D V+Y++LI G C ++EA
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
++ MVSKG P VVTY+ L G + +VEH +KLF EM + GV +T TYT I G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
+ G + A E+FR + +I YN L+ GLC +G+++ A + + + ++V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 489 TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
TYNI+I+G+C G++ A D++ + PD+ T+ ++ G + + + L KM
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 549 KEKKVMPDASIV 560
KE ++P+ V
Sbjct: 493 KEDGILPNECYV 504
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 188/365 (51%)
Query: 205 PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRL 264
P+ +S ++ + K D L+ QM+ I ++ T N L++ C + + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 265 FIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCL 324
+M+ G +PS+VTF +++ C+ ++ +A + D MV G +PN YNT++DG C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 325 MGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
+++ A +L ME G D V+YN LI+G C + +A + M + I P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
+N L + +V A + ++EM R + D TY+ I GLC + EA E+F +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
C D+ Y+ LI+G CKS +++ +LFC + +V N VTY I+IQG C G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
A ++F M P++IT+++L+HG + K +L M++ + D +I++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 565 DLLVK 569
+ K
Sbjct: 439 RGMCK 443
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 167/306 (54%)
Query: 259 NEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTL 318
+++ LF M+ PS+ F+ ++ + K +K D L + M G+ N CT N L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 319 MDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
++ FC +++ A G M +G + V++ L+NG+C+ V +AL ++ +MV G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
KP VV YNT+ GL + QV++AL L + M++DG+ D TY + I GLC +G +A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 439 LFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLC 498
+ + + D+ +N LID K GR+ A E + + L P++VTY+++I GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 499 NDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
++D+A ++F M PDV+T+ +LI+G+ + + +L +M ++ V+ +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 559 IVSIVV 564
+I++
Sbjct: 363 TYTILI 368
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 148/298 (49%)
Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
K+D++ L MVQ P+ ++ L+ M K + L+ M+ +G H+ + N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
IL+N +C+ ++ ALS +M+ G +P++VT+ +L G +V AL +FD+M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
G + Y T IDGLCK+ + A++L + D+ YN LI GLC SGR A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
+ + + P+V T+N +I +G++ +A + + +M + PD++T+ +LI+G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
+ + E+ M K PD SI+++ K++ + F ++G V
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 20/236 (8%)
Query: 354 INGYCKNKEVEEALSLYREMVSKGIK--------------------PTVVTYNTLFLGLF 393
I G+C ++ S YREM+ GI+ P++ ++ L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
++ + + + L+++MQ G+ + T ++ C+ + A+ + L E I
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
+ L++G C+ R+ A +F + PNVV YN +I GLC Q+D A DL M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
E++ PDV+T++ LI G S ++ M ++++ PD + ++D VK
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 256/486 (52%), Gaps = 48/486 (9%)
Query: 38 REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATG 91
R G ++ I +AF +F M+ P P V F LL + A + Y+T ++ G
Sbjct: 43 RTGFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 92 LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
+ +LY++ ILI+CFC+ R+S G++++
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK--------------------------- 134
Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
G EP+++T+ +L++G C A +L M E PN V Y+
Sbjct: 135 --------LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVVYN 180
Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
T+IDGLCK G ++ A L +M+ + + DVVTYN+L+ GLC++ W++A R+ +MM +
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
+ P VVTF ++D K +DEA L M+Q V PN TYN++++G C+ G++ A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLG 391
++ F M S GC + V+YN LI+G+CK + V+E + L++ M +G + TYNTL G
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 392 LFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD 451
++ ++ AL +F M V D T+ + GLC NG I A+ F +R + +
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420
Query: 452 IQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFL 511
I AYN +I GLCK+ +++ AWELFC LP + P+ TY IMI GLC +G +A +L
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIR 480
Query: 512 DMEENA 517
M+E
Sbjct: 481 RMKEEG 486
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 225/445 (50%), Gaps = 8/445 (1%)
Query: 111 RVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFT-KLKAFGCEPNVITY 169
R F F ++ S P+ F L+ A R E F+ K++ +G ++ ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTAT-ANLRRYETVIYFSQKMELYGISHDLYSF 109
Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
LI+ CR AL++ +M E P+ VT+ +++ G C + A +L
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYE------PSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
+ M P+VV YN+LI GLC + N A L EM +G+ VVT+N ++ LC
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
+ + +A+R+L M++R + P+ T+ L+D F G ++ A+EL+ M ++V+
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
YN +ING C + + +A + M SKG P VVTYNTL G + V+ +KLF M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
+G AD TY T I G C+ G + A+++F + + DI + L+ GLC +G ++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
A F + +V YNIMI GLC +++KA +LF + PD T+ ++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 530 HGFIRINEPSKVNELLHKMKEKKVM 554
G + + +EL+ +MKE+ ++
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 223/427 (52%), Gaps = 10/427 (2%)
Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLC--RTGHTMIALNLFEEMANGNGEIGVVC 203
R +A ALF ++ P+++ + L+ R T+I + E+ + ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL---- 106
Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
+++ +I C+ + A ++ +M P +VT+ SL+HG C N +A
Sbjct: 107 ----YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
L I M+ G +P+VV +N ++D LCKN +++ A LL+ M ++G+ + TYNTL+ G C
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
G+ + A + M D V++ LI+ + K ++EA LY+EM+ + P V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
TYN++ GL ++ A K FD M G + TY T I G CK + E ++LF+ +
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
DI YN LI G C+ G+L+ A ++FC + + P+++T+ I++ GLC +G++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
+ A F DM E+ ++ ++++IHG + ++ K EL ++ + V PDA +I+
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 564 VDLLVKN 570
+ L KN
Sbjct: 463 ILGLCKN 469
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 148/298 (49%)
Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
G H+ + +A LF EM+ PS+V F ++ R+ + M G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
+ ++ L+ FC +++ A + G M +G + V++ L++G+C + +A SL
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
MV G +P VV YNTL GL + ++ AL+L +EM++ G+ AD TY T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
G +A + R + D+ + LID K G L A EL+ + + PN VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
N +I GLC G++ A+ F M P+V+T++ LI GF + + +L +M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%)
Query: 353 LINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG 412
L G+ + E+A +L+ EMV P++V + L + + E + +M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 413 VAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAW 472
++ D ++T I C+ + A+ + + L E I + L+ G C R+ A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
L + PNVV YN +I GLC +G+++ A +L +ME+ DV+T++ L+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 533 IRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
S +L M ++ + PD + ++D+ VK
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 45/184 (24%)
Query: 65 PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V ++N L++ K + D R++ G +++TYN LI+ +C++G++ +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 119 FGRILRSCFTPNAAT-----------------------------------FNSLIKGLHA 143
F ++ TP+ T +N +I GL
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 144 ESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVC 203
++ +A LF +L G +P+ TY +I GLC+ G A L M E G++C
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK----EEGIIC 489
Query: 204 KPNT 207
+ N
Sbjct: 490 QMNA 493
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/517 (33%), Positives = 275/517 (53%), Gaps = 55/517 (10%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
NEA +F +M+ P P + F LL +AK K +D +N G+ +LYT N+
Sbjct: 54 NEALDLFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
L+NCFC+ + L A++ K+ G
Sbjct: 113 LMNCFCQSSQPYL-----------------------------------ASSFLGKMMKLG 137
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
EP+++T+ +LING C A+++ +M E+G+ KP+ V Y+TIID LCK G
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV----EMGI--KPDVVMYTTIIDSLCKNG 191
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
V+ A +LF QM++ I PDVV Y SL++GLC++ W +A L M + ++P V+TFN
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
++D K K +A L + M++ + PN TY +L++GFC+ G ++ A ++F ME+
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
GC D V+Y LING+CK K+V++A+ ++ EM KG+ +TY TL G ++ + A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELD-----IQAYN 456
++F M GV + RTY + LC NG + +A+ +F ++ K E+D I YN
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ--KREMDGVAPNIWTYN 429
Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
L+ GLC +G+L+ A +F + + ++TY I+IQG+C G++ A +LF +
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
P+V+T+ +I G R + + L KMKE V
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 163/307 (53%)
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
Y ++ H+ +NEA LF M++ PS++ F +++ + K +K D L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
GV + T N LM+ FC + A G M +G + D V++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
EA+S+ +MV GIKP VV Y T+ L + V +AL LFD+M+ G+ D YT+ +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
+GLC +G +A L R + K + D+ +N LID K G+ A EL+ + +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
PN+ TY +I G C +G +D+AR +F ME PDV+ + LI+GF + + ++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 545 LHKMKEK 551
++M +K
Sbjct: 340 FYEMSQK 346
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 1/364 (0%)
Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
++A LF M + P ++ + L++ + ++ L + GV + T N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
M+ C++ + AS L M++ G P+ T+ +L++GFCL ++ A + M MG
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
K D V Y +I+ CKN V ALSL+ +M + GI+P VV Y +L GL + A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
L M + + D T+ ID K G ++A EL+ + + +I Y LI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
G + A ++F + P+VV Y +I G C ++D A +F +M + + I
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL-V 582
T+ LI GF ++ +P+ E+ M + V P+ ++++ L N K+L F +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 583 QERQ 586
Q+R+
Sbjct: 414 QKRE 417
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 1/218 (0%)
Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
IL NG + + EAL L+ MV P+++ + L + ++ + + + L D +Q
Sbjct: 43 ILRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
GV+ D T ++ C++ A + L E DI + LI+G C R++ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
+ + + P+VV Y +I LC +G ++ A LF ME PDV+ + L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
+ LL M ++K+ PD + ++D VK
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/543 (28%), Positives = 282/543 (51%), Gaps = 12/543 (2%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNI 101
+E + D+M+ P +N +L L +++ G+ P++ T+N+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
LI C+ ++ + + P+ TF ++++G E + A + ++ FG
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
C + ++ N +++G C+ G ALN +EM+N +G P+ T++T+++GLCK G
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
V A + M E +PDV TYNS+I GLC + EA + +M+ + P+ VT+N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
++ LCK +++EA+ L ++ +G+ P+ CT+N+L+ G CL A ELF M S
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
GC+ D+ +YN+LI+ C +++EAL++ ++M G +V+TYNTL G + ++ A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
++FDEM+ GV+ ++ TY T IDGLCK+ + +A +L + + + D YN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
C+ G +K A ++ ++ P++VTY +I GLC G+++ A L ++
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEK-KVMPDASIVSIVVDLLVKNEISLKSLPSF 580
++ +I G R + ++ L +M E+ + PDA IV L ++ F
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 581 LVQ 583
LV+
Sbjct: 670 LVE 672
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 243/495 (49%), Gaps = 14/495 (2%)
Query: 67 VSSFNILLASLAKNKHYDTRLNAT-------GLFPNLYTYNILINCFCKIGRVSLGFIAF 119
S+F IL+ S A+ + D L+ GL P+ + YN ++N + L I+
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISH 177
Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
++ P+ +TFN LIK L ++ A + + ++G P+ T+ T++ G
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN-I 238
G AL + E+M E G C + V+ + I+ G CKEG V+ A +M +++
Sbjct: 238 GDLDGALRIREQMV----EFG--CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PD T+N+L++GLC A A + M+ +G P V T+N ++ LCK ++ EA
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
+LD M+ R PN TYNTL+ C ++ A EL + S G D ++N LI G C
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+ A+ L+ EM SKG +P TYN L L +++ AL + +M+ G A
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY T IDG CK EA E+F + + + YN LIDGLCKS R++ A +L +
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
P+ TYN ++ C G + KA D+ M N PD++T+ LI G +
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 539 SKVNELLHKMKEKKV 553
++LL ++ K +
Sbjct: 592 EVASKLLRSIQMKGI 606
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 225/510 (44%), Gaps = 68/510 (13%)
Query: 127 FTPNAATFNSLIKGLHAESRIMEAAALFTKLKA--------------------------- 159
F+P A + ++ L + + +K+
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 160 ---------FGCEPNVITYNTLIN--------GLCRTGHT-MIALNLFEEMANGNGEIGV 201
FG +P+ YN ++N L H M + +++ N I
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 202 VCKPNTV--------------------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
+C+ + + T++T++ G +EG +D A + QM + +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASRLL 300
V+ N ++HG C +A EM +Q G P TFN +++ LCK + A ++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
D+M+Q G P+ TYN+++ G C +G++ A E+ M + C + V+YN LI+ CK
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
+VEEA L R + SKGI P V T+N+L GL A++LF+EM+ G D TY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP- 479
ID LC G + EA+ + + + + C + YN LIDG CK+ + + A E+F +
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
HGV N VTYN +I GLC +++ A L M PD T++ L+ F R +
Sbjct: 499 HGV-SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 540 KVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
K +++ M PD ++ L K
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 254/480 (52%), Gaps = 48/480 (10%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
N+A +F M+ P P + F LL+ +AK YD ++ G+ P L T NI
Sbjct: 65 NDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
+++C C S+ A+ K+ G
Sbjct: 124 VMHCVC-----------------------------------LSSQPCRASCFLGKMMKLG 148
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
EP+++T+ +L+NG C A+ LF+++ +G+ KPN VTY+T+I LCK
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQI------LGMGFKPNVVTYTTLIRCLCKNR 202
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
++ A LF QM P+VVTYN+L+ GLC W +A L +MM + ++P+V+TF
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
++D K K+ EA L ++M+Q V P+ TY +L++G C+ G ++ A ++F ME
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
GC ++V Y LI+G+CK+K VE+ + ++ EM KG+ +TY L G + + + A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
++F++M D RTY +DGLC NG + +A+ +F +R + +++I Y +I G
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
+CK G+++ A++LFCSL + PNV+TY MI G C G + +A LF M+E+ P+
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 231/441 (52%), Gaps = 6/441 (1%)
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
F R++ S P+ F L+ + +R +LF +++ G P + T N +++ +C
Sbjct: 71 FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCL 130
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+ A +M E P+ VT++++++G C ++ A ALF Q+
Sbjct: 131 SSQPCRASCFLGKMMKLGFE------PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
P+VVTY +LI LC N A LF +M G +P+VVT+N ++ LC+ + +A+
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
LL M++R + PN T+ L+D F +GK+ A+EL+ M M D +Y LING C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
++EA ++ M G P V Y TL G + +VE +K+F EM + GV A+T
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TYT I G C G A E+F + + DI+ YN L+DGLC +G+++ A +F +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
+ N+VTY I+IQG+C G+++ A DLF + P+VIT+ +I GF R
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 539 SKVNELLHKMKEKKVMPDASI 559
+ + L KMKE +P+ S+
Sbjct: 485 HEADSLFKKMKEDGFLPNESV 505
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 2/373 (0%)
Query: 209 TYSTII-DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
+Y I+ +GL F D A LF +M P ++ + L+ + N ++ LF +
Sbjct: 50 SYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
M G+ P + T N++M +C + + AS L M++ G P+ T+ +L++G+C +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
I A LF + MG K + V+Y LI CKN+ + A+ L+ +M + G +P VVTYN
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
L GL EI + A L +M + + + T+T ID K G ++EA EL+ + +
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
D+ Y LI+GLC G L A ++F + PN V Y +I G C +++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
+F +M + + IT+ +LI G+ + P E+ ++M ++ PD ++++D L
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 568 VKNEISLKSLPSF 580
N K+L F
Sbjct: 409 CCNGKVEKALMIF 421
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 217/445 (48%), Gaps = 23/445 (5%)
Query: 131 AATFNSLIKGLHAESRIME--------AAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
A F S++KG H S AA+L F L NGL H
Sbjct: 6 ATGFASIVKGFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGL----HN 61
Query: 183 MI---ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
+ AL+LF M + P+ + ++ ++ + K D +LF QM+ I
Sbjct: 62 LQFNDALDLFTRMVHSRP------LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115
Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
P + T N ++H +C ++ A +MM G +P +VTF +++ C ++++A L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
D ++ G +PN TY TL+ C +N A ELF M + G + + V+YN L+ G C+
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCE 235
Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
+A L R+M+ + I+P V+T+ L ++ ++ A +L++ M + V D T
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
Y + I+GLC G + EA ++F + C + Y LI G CKS R++ ++F +
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
+V N +TY ++IQG C G+ D A+++F M A PD+ T+++L+ G +
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Query: 540 KVNELLHKMKEKKVMPDASIVSIVV 564
K + M+++++ D +IV+ +
Sbjct: 416 KALMIFEYMRKREM--DINIVTYTI 438
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 120/261 (45%)
Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
+ N A +LF M + + L++ K + +SL+ +M GI P + T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
+ + Q A +M + G D T+T+ ++G C I +A+ LF + +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
+ ++ Y LI LCK+ L A ELF + PNVVTYN ++ GLC G+ A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
L DM + P+VITF LI F+++ + + EL + M + V PD +++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 567 LVKNEISLKSLPSFLVQERQG 587
L + ++ F + ER G
Sbjct: 303 LCMYGLLDEARQMFYLMERNG 323
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 269/531 (50%), Gaps = 29/531 (5%)
Query: 56 YMLRMHPSPPPVSSFNILLASLAKNKHYDT-------RLNATGLFPNLYTYNILINCFCK 108
++ + H P V S+N +L + ++K + + + + PN++TYNILI FC
Sbjct: 158 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 217
Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
G + + F ++ PN T+N+LI G +I + L + G EPN+I+
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
YN +INGLCR G + EM + + VTY+T+I G CKEG +A
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSL------DEVTYNTLIKGYCKEGNFHQALV 331
Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
+ +M + P V+TY SLIH +C A + N A +M +G+ P+ T+ ++D
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
+ M+EA R+L M G P+ TYN L++G C+ GK+ A + M+ G D V
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
SY+ +++G+C++ +V+EAL + REMV KGIKP +TY++L G E + + A L++EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
R G+ D TYT I+ C G + +A++L + D+ Y+ LI+GL K R
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQ---------------GLCNDGQMDKARDLFLDM 513
+ A L L + VP+ VTY+ +I+ G C G M +A +F M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM-KEKKVMPDASIVSIV 563
PD ++++IHG R + K L +M K ++ +++++V
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 263/519 (50%), Gaps = 28/519 (5%)
Query: 68 SSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGR-VSLGFIAFG 120
S F++++ S ++ D L+ A G P + +YN +++ + R +S F
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
+L S +PN T+N LI+G I A LF K++ GC PNV+TYNTLI+G C+
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
L MA E PN ++Y+ +I+GLC+EG + + + +M +
Sbjct: 255 KIDDGFKLLRSMALKGLE------PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
D VTYN+LI G C ++++A + EM+ G+ PSV+T+ ++ +CK M+ A L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
D M RG+ PN TY TL+DGF G +N A + M G V+YN LING+C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
++E+A+++ +M KG+ P VV+Y+T+ G + V+ AL++ EM G+ DT TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
++ I G C+ EA +L+ + + D Y LI+ C G L+ A +L +
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH---------- 530
++P+VVTY+++I GL + +A+ L L + + P +T+ LI
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 531 -----GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
GF ++ +++ M K PD + +I++
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 260/490 (53%), Gaps = 39/490 (7%)
Query: 40 GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLF 93
G+I+V A +FD M P V ++N L+ K + D + GL
Sbjct: 219 GNIDV-----ALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 94 PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
PNL +YN++IN C+ GR+ + R ++ + T+N+LIKG E +A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
++ G P+VITY +LI+ +C+ G+ A+ ++M + +C PN TY+T+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNERTYTTL 386
Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
+DG ++G++++A + +M D +P VVTYN+LI+G C +A + +M ++G+
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
P VV+++ ++ C++ +DEA R+ MV++G++P+ TY++L+ GFC + A +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
L+ M +G D+ +Y LIN YC ++E+AL L+ EMV KG+ P VVTY+ L GL
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 394 EIHQVEHA----LKLFDEMQRDGVAADTRTYT--------------TFIDGLCKNGYIIE 435
+ + A LKLF E + V +D +T + I G C G + E
Sbjct: 567 KQSRTREAKRLLLKLFYE---ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623
Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
A ++F ++ + D AYN +I G C++G ++ A+ L+ + + + VT +++
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683
Query: 496 GLCNDGQMDK 505
L +G++++
Sbjct: 684 ALHKEGKVNE 693
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 204/402 (50%), Gaps = 36/402 (8%)
Query: 205 PNTVTYSTIIDGLCKEGF-VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
P ++Y+ ++D + + A+ +F +M + ++P+V TYN LI G C A + + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
LF +M +G P+VVT+N ++D CK RK+D+ +LL M +G+ PN +YN +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
G++ + M G D+V+YN LI GYCK +AL ++ EM+ G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
TY +L + + + A++ D+M+ G+ + RTYTT +DG + GY+ EA + R +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV--------------- 488
+ YN LI+G C +G+++ A + + L P+VV
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 489 --------------------TYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
TY+ +IQG C + +A DL+ +M PD T+ L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
I+ + + K +L ++M EK V+PD S++++ L K
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 263/527 (49%), Gaps = 66/527 (12%)
Query: 1 MGLESCCNRSFSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRM 60
+ L C +R+FS S RS S I N+A +F M
Sbjct: 31 LSLRICNSRAFSGRSDYRERLRSGLHS-----------------IKFNDALTLFCDMAES 73
Query: 61 HPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSL 114
HP P V F+ LL ++AK Y+ L G+ +LY++ LI+CFC+ R+SL
Sbjct: 74 HPLPSIVD-FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSL 132
Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
G++++ G EP+++T+ +L+N
Sbjct: 133 ALSCLGKMMK-----------------------------------LGFEPSIVTFGSLVN 157
Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
G C A++L +++ +G+ +PN V Y+TIID LC++G V+ A + MK
Sbjct: 158 GFCHVNRFYEAMSLVDQI------VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
I PDVVTYNSLI L H+ W + R+ +MM G+ P V+TF+ ++D K ++
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
EA + + M+QR V PN TYN+L++G C+ G ++ A+++ + S G + V+YN LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
NGYCK K V++ + + M G+ TYNTL+ G + + A K+ M GV
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
D T+ +DGLC +G I +A+ L+ K + I YN +I GLCK+ +++ AW L
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME-ENAAAP 520
FCSL + P+V+TY M+ GL +A +L+ M+ E+ P
Sbjct: 452 FCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 219/430 (50%), Gaps = 11/430 (2%)
Query: 129 PNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNL 188
P+ F+ L+ + ++ +LF L+ G ++ ++ TLI+ CR +AL+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 189 FEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSL 248
+M E P+ VT+ ++++G C +A +L Q+ P+VV YN++
Sbjct: 137 LGKMMKLGFE------PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTI 190
Query: 249 IHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGV 308
I LC N A + M G++P VVT+N ++ L + ++R+L M++ G+
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
P+ T++ L+D + G++ A++ + M + V+YN LING C + ++EA
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
+ +VSKG P VTYNTL G + +V+ +K+ M RDGV DT TY T G C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 429 KNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
+ G A ++ R++ C + D+ +N L+DGLC G++ A L V
Sbjct: 371 QAGKFSAAEKVLG--RMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLH 546
++TYNI+I+GLC +++ A LF + +PDVIT+ ++ G R + +EL
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488
Query: 547 KM-KEKKVMP 555
KM KE +MP
Sbjct: 489 KMQKEDGLMP 498
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 198/429 (46%), Gaps = 10/429 (2%)
Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI----ALNLFEEMANGNGEIGVV 202
++E L T L C + + R+G I AL LF +MA +
Sbjct: 21 LLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPL---- 76
Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
P+ V +S ++ + K + +LF ++ I+ D+ ++ +LI C + A
Sbjct: 77 --PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLAL 134
Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
+MM G +PS+VTF +++ C + EA L+D +V G PN YNT++D
Sbjct: 135 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
C G++N A ++ M+ MG + D V+YN LI + + + +M+ GI P V
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
+T++ L + Q+ A K ++EM + V + TY + I+GLC +G + EA ++
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
L + YN LI+G CK+ R+ ++ C + + + TYN + QG C G+
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
A + M PD+ TF++L+ G + K L +++ K + +I
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNI 434
Query: 563 VVDLLVKNE 571
++ L K +
Sbjct: 435 IIKGLCKAD 443
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 145/301 (48%)
Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
K ++A L M + P+ ++ L+ + K LF +E +G HD S+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRD 411
LI+ +C+ + ALS +M+ G +P++VT+ +L G +++ A+ L D++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 412 GVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA 471
G + Y T ID LC+ G + A+++ + ++ + D+ YN LI L SG +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 472 WELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
+ + + P+V+T++ +I +GQ+ +A+ + +M + + P+++T++ LI+G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 532 FIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVGE 591
+ ++L+ + K P+A + +++ K + + V R G G+
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 592 S 592
+
Sbjct: 359 T 359
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/516 (32%), Positives = 267/516 (51%), Gaps = 48/516 (9%)
Query: 17 PISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAS 76
P ++ +FS H +++ I ++AF +F ML+ P P V F +L
Sbjct: 30 PETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTV 88
Query: 77 LAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
+AK +D ++ G+ +LY++ ILI+CFC+ R+SL G++++
Sbjct: 89 IAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK------ 142
Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
G P+++T +L+NG C+ A++L +
Sbjct: 143 -----------------------------LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
M +G G + PN V Y+T+I+GLCK ++ A +F M+ + I D VTYN+LI
Sbjct: 174 SM-DGFGFV-----PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
GL ++ W +A RL +M+ + + P+V+ F ++D K + EA L M++R V P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
N TYN+L++GFC+ G + A+ +F M S GC D V+YN LI G+CK+K VE+ + L+
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
EM +G+ TYNTL G + ++ A K+F+ M GV+ D TY +D LC N
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
G I +A+ + L+ + ++DI YN +I GLC++ +LK AW LF SL + P+ + Y
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
MI GLC G +A L M+E+ P +D
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 229/447 (51%), Gaps = 10/447 (2%)
Query: 115 GFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLIN 174
F F +L+S P+ F ++ + ++ L+ K++ G ++ ++ LI+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 175 GLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
CR +AL L +M ++G +P+ VT ++++G C+ +A +L M
Sbjct: 123 CFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
P+VV YN++I+GLC D N A +F M +G++ VT+N ++ L + +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
+A+RLL MV+R + PN + L+D F G + A L+ M + +YN LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
NG+C + + +A ++ MVSKG P VVTYNTL G + +VE +KLF EM G+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL--DIQAYNCLIDGLCKSGRLKFAW 472
D TY T I G C+ G + A ++F R++ C + DI YN L+D LC +G+++ A
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFN--RMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 473 ELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
+ L + +++TYNI+IQGLC ++ +A LF + PD I + +I G
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 533 IRINEPSKVNELLHKMKEKKVMPDASI 559
R + ++L +MKE MP I
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERI 501
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 174/347 (50%)
Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
D A +LF +M P +V + ++ + N ++ L+ +M + G+ + +F ++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
+ C+ ++ A LL M++ G RP+ T +L++GFC + A L SM+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
+ V YN +ING CKN+++ AL ++ M KGI+ VTYNTL GL + A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
L +M + + + +T ID K G ++EA L++ + ++ YN LI+G C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
G L A +F + P+VVTYN +I G C +++ LF +M D
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
T++ LIHG+ + + + ++ ++M + V PD +I++D L N
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 153/313 (48%)
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
Y + H +++A LF EM+ PS+V F ++ + K K D L M
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
G+ + ++ L+ FC +++ A L G M +G + V+ L+NG+C+ +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
EA+SL M G P VV YNT+ GL + + +AL++F M++ G+ AD TY T I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
GL +G +A L R + K + ++ + LID K G L A L+ + +V
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
PNV TYN +I G C G + A+ +F M PDV+T++ LI GF + +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 545 LHKMKEKKVMPDA 557
+M + ++ DA
Sbjct: 347 FCEMTYQGLVGDA 359
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 269/522 (51%), Gaps = 21/522 (4%)
Query: 57 MLRMHPSPPPVSSFNILLASL--------AKNKHYDTRLNATGLFPNLYTYNILINCFCK 108
M ++ P S+N++L L A N YD + + + P L+T+ +++ FC
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD--MLSRKIPPTLFTFGVVMKAFCA 229
Query: 109 IGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVIT 168
+ + + + PN+ + +LI L +R+ EA L ++ GC P+ T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
+N +I GLC+ +N +M N G P+ +TY +++GLCK G VD AK
Sbjct: 290 FNDVILGLCKFDR----INEAAKMVNRMLIRGFA--PDDITYGYLMNGLCKIGRVDAAKD 343
Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDEL 287
LF ++ P++V +N+LIHG ++AK + +M+ G+ P V T+N ++
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 288 CKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDD 347
K + A +L M +G +PN +Y L+DGFC +GKI+ A + M + G K +
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
V +N LI+ +CK + EA+ ++REM KG KP V T+N+L GL E+ +++HAL L +
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 408 MQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
M +GV A+T TY T I+ + G I EA +L + LD YN LI GLC++G
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 468 LKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDM 527
+ A LF + P+ ++ NI+I GLC G +++A + +M + PD++TF+
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
LI+G R + K++ + + PD + ++ L K
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 249/512 (48%), Gaps = 52/512 (10%)
Query: 64 PPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFI 117
PP + +F +++ + D+ L+ G PN Y LI+ K RV+
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
+ P+A TFN +I GL RI EAA + ++ G P+ ITY L+NGLC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQM-KDE 236
+ G A +LF + KP V ++T+I G G +D AKA+ M
Sbjct: 334 KIGRVDAAKDLFYRIP----------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 237 NINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEA 296
I PDV TYNSLI+G A + +M ++G +P+V ++ +++D CK K+DEA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILING 356
+L+ M G++PN +N L+ FC +I A E+F M GCK D ++N LI+G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 357 YCKNKEVEEALSLYREMVSKGIKPTVVTYNTL---FL----------------------- 390
C+ E++ AL L R+M+S+G+ VTYNTL FL
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 391 ---------GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
GL +V+ A LF++M RDG A + I+GLC++G + EAVE +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
+ + DI +N LI+GLC++GR++ +F L + P+ VT+N ++ LC G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFI 533
+ A L + E+ P+ T+ +L+ I
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 220/452 (48%), Gaps = 14/452 (3%)
Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
R + SC P ++N +++ L + + AA +F + + P + T+ ++ C
Sbjct: 173 RNVYSC-EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
AL+L +M C PN+V Y T+I L K V++A L +M P
Sbjct: 232 EIDSALSLLRDMTKHG------CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
D T+N +I GLC + NEA ++ M+ +G P +T+ +M+ LCK ++D A L
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-ESMGCKHDDVSYNILINGYCK 359
R +P +NTL+ GF G+++ A+ + M S G D +YN LI GY K
Sbjct: 346 ----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
V AL + +M +KG KP V +Y L G ++ +++ A + +EM DG+ +T
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFA-WELFCSL 478
+ I CK I EAVE+FR + C+ D+ +N LI GLC+ +K A W L +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
GV V N VTYN +I G++ +AR L +M + D IT++ LI G R E
Sbjct: 522 SEGV-VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
K L KM P +I+++ L ++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 8/382 (2%)
Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
Y +I L G L +QMKDE I + S++ A + RL +EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 269 MD-QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
+ +P+ ++NV+++ L A+ + M+ R + P T+ +M FC + +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
I+ A L M GC + V Y LI+ K V EAL L EM G P T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
+ LGL + ++ A K+ + M G A D TY ++GLCK G + A +LF RI K
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRIPK 350
Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSL--PHGVLVPNVVTYNIMIQGLCNDGQMDK 505
E+ I +N LI G GRL A + + +G+ VP+V TYN +I G +G +
Sbjct: 351 PEIVI--FNTLIHGFVTHGRLDDAKAVLSDMVTSYGI-VPDVCTYNSLIYGYWKEGLVGL 407
Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
A ++ DM P+V ++ +L+ GF ++ + + +L++M + P+ + ++
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 566 LLVKNEISLKSLPSFLVQERQG 587
K +++ F R+G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKG 489
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 74/355 (20%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNIL--------LASLAKNKHYDTRLNATGLFPNLYTY 99
++A + M+ + P V ++N L L LA +D R G PN+Y+Y
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR--NKGCKPNVYSY 427
Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
IL++ FCK+G++ + + PN FN LI E RI EA +F ++
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEM------ANG------------NGEIGV 201
GC+P+V T+N+LI+GLC AL L +M AN GEI
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 202 VCK----------P-NTVTYSTIIDGLCKEGFVDKAKALFLQM-----KDENIN------ 239
K P + +TY+++I GLC+ G VDKA++LF +M NI+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 240 ------------------------PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQP 275
PD+VT+NSLI+GLC A + +F ++ +G+ P
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 276 SVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
VTFN +M LCK + +A LLD ++ G PN T++ L+ ++R
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 256/498 (51%), Gaps = 13/498 (2%)
Query: 67 VSSFNILLASLAKN---KHYDTRLNAT---GLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
+S+FN LL L K K + L+ G+ PNL+TYN+ I C+ G + G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
++ P+ T+N+LI GL S+ EA K+ G EP+ TYNTLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
+A + + A NG + P+ TY ++IDGLC EG ++A ALF + + I P
Sbjct: 336 MVQLAERIVGD-AVFNGFV-----PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
+V+ YN+LI GL + EA +L EM ++G+ P V TFN++++ LCK + +A L+
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
+M+ +G P+ T+N L+ G+ K+ A E+ M G D +YN L+NG CK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
+ E+ + Y+ MV KG P + T+N L L +++ AL L +EM+ V D T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 421 TTFIDGLCKNGYIIEAVELFRTLR-ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
T IDG CKNG + A LFR + K YN +I + + A +LF +
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
L P+ TY +M+ G C G ++ L+M EN P + T +I+ +
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 540 KVNELLHKMKEKKVMPDA 557
+ ++H+M +K ++P+A
Sbjct: 690 EAAGIIHRMVQKGLVPEA 707
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 235/477 (49%), Gaps = 6/477 (1%)
Query: 94 PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
P +++YN +++ G + R+ TP+ +F +K SR A L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
+ + GCE NV+ Y T++ G LF +M + + T++ +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS------TFNKL 222
Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
+ LCK+G V + + L ++ + P++ TYN I GLC + + A R+ +++QG
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
+P V+T+N ++ LCKN K EA L MV G+ P++ TYNTL+ G+C G + AE
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
+ G G D +Y LI+G C E AL+L+ E + KGIKP V+ YNTL GL
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
+ A +L +EM G+ + +T+ ++GLCK G + +A L + + DI
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
+N LI G +++ A E+ + + P+V TYN ++ GLC + + + + M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
E AP++ TF++L+ R + + LL +MK K V PDA ++D KN
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/564 (27%), Positives = 269/564 (47%), Gaps = 49/564 (8%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
EA +F+ M + P V S+N +++ L + ++D R+ G+ P++Y++ I
Sbjct: 93 QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
+ FCK R + N + +++ G + E+ E LF K+ A G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
+ T+N L+ LC+ G L +++ + GV+ PN TY+ I GLC+ G
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI----KRGVL--PNLFTYNLFIQGLCQRG 265
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
+D A + + ++ PDV+TYN+LI+GLC + + EA+ +M+++G++P T+N
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
++ CK + A R++ V G P+ TY +L+DG C G+ NRA LF
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 342 GCKHDDVSY-----------------------------------NILINGYCKNKEVEEA 366
G K + + Y NIL+NG CK V +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 367 LSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDG 426
L + M+SKG P + T+N L G ++E+AL++ D M +GV D TY + ++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 427 LCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPN 486
LCK + +E ++T+ C ++ +N L++ LC+ +L A L + + + P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 487 VVTYNIMIQGLCNDGQMDKARDLFLDMEEN-AAAPDVITFDMLIHGFIRINEPSKVNELL 545
VT+ +I G C +G +D A LF MEE + T++++IH F + +L
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 546 HKMKEKKVMPDASIVSIVVDLLVK 569
+M ++ + PD ++VD K
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCK 649
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 217/483 (44%), Gaps = 91/483 (18%)
Query: 65 PPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V ++N L+ L KN Y ++ GL P+ YTYN LI +CK G V L
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
G + + F P+ T+ SLI GL E A ALF + G +PNVI YNTLI GL
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALF-------- 230
G + A L EM+ E G++ P T++ +++GLCK G V A L
Sbjct: 404 QGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 231 ---------------LQMKDEN------------INPDVVTYNSLIHGLCHANDWNEAKR 263
Q+K EN ++PDV TYNSL++GLC + + +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
+ M+++G P++ TFN++++ LC+ RK+DEA LL+ M + V P+A T+ TL+DGFC
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 324 LMGKINRAEELFGSME-------------------------SMGCK-----------HDD 347
G ++ A LF ME +M K D
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 348 VSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDE 407
+Y ++++G+CK V EM+ G P++ T + L +V A +
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Query: 408 MQRDGVAADTRTYTTFIDGLCK-NGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
M + G+ + ++ +C + + A +L + K + AY L DGL +
Sbjct: 698 MVQKGLVPEA------VNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL-RDK 750
Query: 467 RLK 469
RL+
Sbjct: 751 RLR 753
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 204/459 (44%), Gaps = 53/459 (11%)
Query: 148 MEAAALFTKL-KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
M+A +F + K G + + TY ++I L G FE M E+ V + N
Sbjct: 21 MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGK-------FEAME----EVLVDMREN 69
Query: 207 TV------TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNE 260
Y + ++G V +A +F +M + P V +YN+++ L + +++
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 261 AKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMD 320
A ++++ M D+G+ P V +F + M CK + A RLL+ M +G N Y T++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 321 GFCLMGKINRAEELFGSMESMG---------------CKHDDV----------------- 348
GF ELFG M + G CK DV
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 349 ---SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
+YN+ I G C+ E++ A+ + ++ +G KP V+TYN L GL + + + A
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
+M +G+ D+ TY T I G CK G + A + D Y LIDGLC
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
G A LF + PNV+ YN +I+GL N G + +A L +M E P+V TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
++L++G ++ S + L+ M K PD +I++
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 163/343 (47%), Gaps = 14/343 (4%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNI 101
N A +F+ L P V +N L+ L+ ++ GL P + T+NI
Sbjct: 373 NRALALFNEALG-KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
L+N CK+G VS ++ + P+ TFN LI G + ++ A + + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
+P+V TYN+L+NGLC+T + ++ M C PN T++ +++ LC+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYR 545
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTF 280
+D+A L +MK++++NPD VT+ +LI G C D + A LF +M + V S T+
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
N+I+ + + A +L MV R + P+ TY ++DGFC G +N + M
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
G + +IN C V EA + MV KG+ P V
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 247/514 (48%), Gaps = 12/514 (2%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNIL--LASLAKN---KHYDTRLNATGLFPNLYTYNILI 103
EA F M R P S +L A L K K + + G P ++TYNI+I
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 104 NCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
+C CK G V F + P+ T+NS+I G R+ + F ++K CE
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
P+VITYN LIN C+ G I L + EM GNG KPN V+YST++D CKEG +
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMM 383
Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
+A ++ M+ + P+ TY SLI C + ++A RL EM+ GV+ +VVT+ +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
+D LC +M EA L M GV PN +YN L+ GF ++RA EL ++ G
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
K D + Y I G C +++E A + EM GIK + Y TL F+ L
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELF-RTLRILKCELDIQAYNCLIDGL 462
L DEM+ + T+ IDGLCKN + +AV+ F R + + + +IDGL
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
CK +++ A LF + LVP+ Y ++ G G + +A L M E D+
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
+ + L+ G N+ K L +M + + PD
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/536 (27%), Positives = 252/536 (47%), Gaps = 36/536 (6%)
Query: 49 EAFCIFDYML---RMHPSPPPVSSFNILLASLAKNKHYDTRLNATGL-FPNLYTYNILIN 104
E++CI ++L RM+ V +L S A +D + + P ++ L +
Sbjct: 143 ESYCIVAHILFCARMYYDANSVLKEMVL--SKADCDVFDVLWSTRNVCVPGFGVFDALFS 200
Query: 105 CFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEP 164
+G + F ++ R P + N L+ + + F + G P
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260
Query: 165 NVITYNTLINGLCRTGHTMIALNLFEEMA---------------NGNGEIG--------- 200
V TYN +I+ +C+ G A LFEEM +G G++G
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 201 -----VVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
+ C+P+ +TY+ +I+ CK G + + +MK + P+VV+Y++L+ C
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
+A + +++M G+ P+ T+ ++D CK + +A RL + M+Q GV N TY
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
L+DG C ++ AEELFG M++ G + SYN LI+G+ K K ++ AL L E+
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
+GIKP ++ Y T GL + ++E A + +EM+ G+ A++ YTT +D K+G E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGV-LVPNVVTYNIMI 494
+ L ++ L E+ + + LIDGLCK+ + A + F + + L N + MI
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 495 QGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
GLC D Q++ A LF M + PD + L+ G + + L KM E
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 199/369 (53%)
Query: 202 VCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEA 261
VC P + + L G +++A F +MK + P + N L+H ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 262 KRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDG 321
KR F +M+ G +P+V T+N+++D +CK ++ A L + M RG+ P+ TYN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 322 FCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPT 381
F +G+++ F M+ M C+ D ++YN LIN +CK ++ L YREM G+KP
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
VV+Y+TL + ++ A+K + +M+R G+ + TYT+ ID CK G + +A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
+ + E ++ Y LIDGLC + R+K A ELF + ++PN+ +YN +I G
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
MD+A +L +++ PD++ + I G + + ++++MKE + ++ I +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 562 IVVDLLVKN 570
++D K+
Sbjct: 547 TLMDAYFKS 555
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 65 PPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V S++ L+ + K + + GL PN YTY LI+ CKIG +S F
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
+L+ N T+ +LI GL R+ EA LF K+ G PN+ +YN LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 179 TGHTMIALNLFEEMA-------------------------------NGNGEIGVVCKPNT 207
+ AL L E+ N E G+ K N+
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI--KANS 542
Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
+ Y+T++D K G + L +MK+ +I VVT+ LI GLC ++A F
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 268 MM-DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
+ D G+Q + F ++D LCK+ +++ A+ L + MVQ+G+ P+ Y +LMDG G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
+ A L M +G K D ++Y L+ G ++++A S EM+ +GI P V
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722
Query: 387 TLFLGLFEIHQVEHALKL 404
++ +E+ ++ A++L
Sbjct: 723 SVLKKHYELGCIDEAVEL 740
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 15/268 (5%)
Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV-SKG--------------IKPT 381
SM G KH SY I+ + + +A S+ +EMV SK P
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 382 VVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFR 441
++ LF L ++ +E A++ F +M+R V TR+ + K G + F+
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 442 TLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
+ + YN +ID +CK G ++ A LF + LVP+ VTYN MI G G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVS 561
++D F +M++ PDVIT++ LI+ F + + E +MK + P+ S
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 562 IVVDLLVKNEISLKSLPSFLVQERQGEV 589
+VD K + +++ ++ R G V
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 245/468 (52%), Gaps = 9/468 (1%)
Query: 91 GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
G P++ LI FC++G+ + S P+ T+N +I G I A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
++ ++ P+V+TYNT++ LC +G A+ + + M + C P+ +TY
Sbjct: 192 LSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITY 242
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
+ +I+ C++ V A L +M+D PDVVTYN L++G+C +EA + +M
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
G QP+V+T N+I+ +C + +A +LL M+++G P+ T+N L++ C G + R
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
A ++ M GC+ + +SYN L++G+CK K+++ A+ MVS+G P +VTYNT+
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
L + +VE A+++ +++ G + TY T IDGL K G +A++L +R +
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
D Y+ L+ GL + G++ A + F + PN VT+N ++ GLC Q D+A D
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDAS 558
+ M P+ ++ +LI G + ELL+++ K +M +S
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 207/422 (49%), Gaps = 11/422 (2%)
Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMA-NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDK 225
+ N + + RTG E M +GN P+ + +T+I G C+ G K
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGN-------VPDIIPCTTLIRGFCRLGKTRK 155
Query: 226 AKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMD 285
A + ++ PDV+TYN +I G C A + N A + M V P VVT+N I+
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR 212
Query: 286 ELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKH 345
LC + K+ +A +LD M+QR P+ TY L++ C + A +L M GC
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 346 DDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLF 405
D V+YN+L+NG CK ++EA+ +M S G +P V+T+N + + + A KL
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 406 DEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
+M R G + T+ I+ LC+ G + A+++ + C+ + +YN L+ G CK
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 466 GRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITF 525
++ A E + P++VTYN M+ LC DG+++ A ++ + +P +IT+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 526 DMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQER 585
+ +I G + + K +LL +M+ K + PD S +V L + +++ F ER
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 586 QG 587
G
Sbjct: 513 MG 514
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 254 bits (650), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 257/540 (47%), Gaps = 46/540 (8%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
P ++ NILL SL + + A G+ P++Y + IN FCK G+V F
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF 296
Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
++ + PN TFN++I GL R EA K+ G EP +ITY+ L+ GL R
Sbjct: 297 SKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRA 356
Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
A + +EM PN + Y+ +ID + G ++KA + M + ++
Sbjct: 357 KRIGDAYFVLKEMTKKG------FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410
Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
TYN+LI G C + A+RL EM+ G + +F ++ LC + D A R
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELF------------------------ 335
+ M+ R + P TL+ G C GK ++A EL+
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 336 -GSMESM----------GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
G ++ GC D VSYN LI+G C K+++EA EMV +G+KP T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
Y+ L GLF +++VE A++ +D+ +R+G+ D TY+ IDG CK E E F +
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
+ + YN LI C+SGRL A EL + H + PN TY +I+G+ +++
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
+A+ LF +M P+V + LI G+ ++ + KV LL +M K V P+ ++++
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 239/505 (47%), Gaps = 35/505 (6%)
Query: 65 PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V +FN ++ L YD ++ G+ P L TY+IL+ + R+ +
Sbjct: 306 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 365
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
+ + F PN +N+LI + +A + + + G TYNTLI G C+
Sbjct: 366 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 425
Query: 179 TGHTMIALNLFEEM------ANGNGEIGVVC-----------------------KPNTVT 209
G A L +EM N V+C P
Sbjct: 426 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 485
Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
+T+I GLCK G KA L+ Q ++ D T N+L+HGLC A +EA R+ E++
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
+G V++N ++ C +K+DEA LD MV+RG++P+ TY+ L+ G M K+
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605
Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
A + + + G D +Y+++I+G CK + EE + EM+SK ++P V YN L
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
++ AL+L ++M+ G++ ++ TYT+ I G+ + EA LF +R+ E
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 725
Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
++ Y LIDG K G++ L + + PN +TY +MI G DG + +A L
Sbjct: 726 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 785
Query: 510 FLDMEENAAAPDVITFDMLIHGFIR 534
+M E PD IT+ I+G+++
Sbjct: 786 LNEMREKGIVPDSITYKEFIYGYLK 810
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 214/425 (50%), Gaps = 13/425 (3%)
Query: 150 AAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PN 206
A +F L G P+ T N L+ L R F+ VVCK P+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD----------VVCKGVSPD 272
Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
++T I+ CK G V++A LF +M++ + P+VVT+N++I GL ++EA
Sbjct: 273 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 332
Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
+M+++G++P+++T+++++ L + +++ +A +L M ++G PN YN L+D F G
Sbjct: 333 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 392
Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
+N+A E+ M S G +YN LI GYCKN + + A L +EM+S G ++
Sbjct: 393 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 452
Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL 446
++ L + AL+ EM ++ TT I GLCK+G +A+EL+
Sbjct: 453 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 512
Query: 447 KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA 506
+D + N L+ GLC++G+L A+ + + V + V+YN +I G C ++D+A
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572
Query: 507 RDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDL 566
+M + PD T+ +LI G +N+ + + K ++PD S+++D
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Query: 567 LVKNE 571
K E
Sbjct: 633 CCKAE 637
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 180/374 (48%), Gaps = 12/374 (3%)
Query: 69 SFNILLASLAKNKHYDTRLNATG------LFPNLYTYNILINCFCKIGRVSLGFIAFGRI 122
SF ++ L + +D+ L G + P LI+ CK G+ S + +
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509
Query: 123 LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHT 182
L F + T N+L+ GL ++ EA + ++ GC + ++YNTLI+G C
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569
Query: 183 MIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
A +EM KP+ TYS +I GL V++A + K + PDV
Sbjct: 570 DEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623
Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
TY+ +I G C A E + F EMM + VQP+ V +N ++ C++ ++ A L +
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 683
Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
M +G+ PN+ TY +L+ G ++ ++ A+ LF M G + + Y LI+GY K +
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
+ + L REM SK + P +TY + G V A +L +EM+ G+ D+ TY
Sbjct: 744 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803
Query: 423 FIDGLCKNGYIIEA 436
FI G K G ++EA
Sbjct: 804 FIYGYLKQGGVLEA 817
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 16/339 (4%)
Query: 91 GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
G + T N L++ C+ G++ F IL + ++N+LI G + ++ EA
Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 572
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
++ G +P+ TY+ LI GL A+ +++ NG + P+ TY
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTY 626
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
S +IDG CK ++ + F +M +N+ P+ V YN LI C + + A L +M
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
+G+ P+ T+ ++ + +++EA L + M G+ PN Y L+DG+ +G++ +
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
E L M S + ++Y ++I GY ++ V EA L EM KGI P +TY
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 806
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCK 429
G + V A K +D Y I+G K
Sbjct: 807 GYLKQGGVLEAFK----------GSDEENYAAIIEGWNK 835
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 158/542 (29%), Positives = 260/542 (47%), Gaps = 49/542 (9%)
Query: 71 NILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
N L+A L ++++++ ++ T F N + + L+ C+ ++ + F +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
F N N L+KGL +A +L +++ P+V +YNT+I G C
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
AL L EM G+G C + VT+ +ID CK G +D+A +MK + D+V
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
Y SLI G C + + K LF E++++G P +T+N ++ CK ++ EAS + + M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
+RGVRPN TY L+DG C +GK A +L M + + V+YNI+IN CK+ V
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDG--VAADTRTYTT 422
+A+ + M + +P +TYN L GL ++ A KL M +D D +Y
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 423 FIDGLCKN-----------------------------------GYIIEAVELFRTLRILK 447
I GLCK G + +A+EL++ + K
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
+ Y +IDG CK+G L A L C + L P+V YN ++ LC +G +D+A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
LF +M+ + PDV++F+++I G ++ + LL M + PD S +++
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 568 VK 569
+K
Sbjct: 610 LK 611
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 259/526 (49%), Gaps = 21/526 (3%)
Query: 50 AFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH--------YDTRLNATGLFPNLYTYNI 101
AF + ML+ V + NILL L +N + R N+ L P++++YN
Sbjct: 126 AFGVLALMLK-RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS--LMPDVFSYNT 182
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
+I FC+ + + S + + T+ LI ++ EA ++K G
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEE-MANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
E +++ Y +LI G C G LF+E + G+ P +TY+T+I G CK
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKL 295
Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
G + +A +F M + + P+V TY LI GLC EA +L M+++ +P+ VT+
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM-- 338
N+I+++LCK+ + +A +++LM +R RP+ TYN L+ G C G ++ A +L M
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
+S D +SYN LI+G CK + +AL +Y +V K VT N L + V
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475
Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
A++L+ ++ + ++ TYT IDG CK G + A L +R+ + + + YNCL
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535
Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
+ LCK G L AW LF + P+VV++NIMI G G + A L + M
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
+PD+ T+ LI+ F+++ + KM + PDA I V+
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 227/479 (47%), Gaps = 43/479 (8%)
Query: 91 GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
GL +L Y LI FC G + G F +L +P A T+N+LI+G ++ EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
+ +F + G PNV TY LI+GLC G T AL L M + E PN VTY
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE------PNAVTY 355
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
+ II+ LCK+G V A + MK PD +TYN L+ GLC D +EA +L M+
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Query: 271 QG--VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
P V+++N ++ LCK ++ +A + DL+V++ + T N L++ G +
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475
Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
N+A EL+ + + +Y +I+G+CK + A L +M ++P+V YN L
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535
Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
L + ++ A +LF+EMQRD D ++ IDG K G
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG----------------- 578
Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
DI++ L+ G+ ++G L P++ TY+ +I G +D+A
Sbjct: 579 --DIKSAESLLVGMSRAG----------------LSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
F M ++ PD D ++ I E K+ EL+ K+ +K ++ D + V+D +
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 191/419 (45%), Gaps = 11/419 (2%)
Query: 53 IFDYMLRMHPSPPPVSSFNIL------LASLAKNKHYDTRLNATGLFPNLYTYNILINCF 106
+FD +L SP ++ +N L L L + + G+ PN+YTY LI+
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
C +G+ ++ PNA T+N +I L + + +A + +K P+
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
ITYN L+ GLC G A L M + P+ ++Y+ +I GLCKE + +A
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSS----YTDPDVISYNALIHGLCKENRLHQA 443
Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
++ + ++ D VT N L++ A D N+A L+ ++ D + + T+ ++D
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
CK ++ A LL M ++P+ YN L+ C G +++A LF M+ D
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
VS+NI+I+G K +++ A SL M G+ P + TY+ L ++ ++ A+ FD
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKS 465
+M G D + + G + EL + L LD + ++D +C S
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 166/570 (29%), Positives = 276/570 (48%), Gaps = 20/570 (3%)
Query: 11 FSFASAPISAFRSNFSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSF 70
FS S + + +FS LL L+ + +I+ EA +F + LR P S
Sbjct: 96 FSAFSLSSPSLKHDFSYLL-----LSVLLNESKMIS--EAADLF-FALRNEGIYPSSDSL 147
Query: 71 NILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
+LL L K K + +N + P+ + Y I K+ V G F R+
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207
Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
P+ +N LI GL R+ +A LF ++ A P++ITYNTLI+G C+ G+
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267
Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
+ + E M + E P+ +T++T++ GL K G V+ A+ + +MKD PD T
Sbjct: 268 SFKVRERMKADHIE------PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
++ L G A ++ +D GV+ + T +++++ LCK K+++A +L +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
+G+ PN YNT++DG+C G + A +ME G K D ++YN LI +C+ E+E
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
A +M KG+ P+V TYN L G ++ + + EM+ +G + +Y T I
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
+ LCK ++EA + R + ++ YN LIDG C G+++ A+ + +
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
N+VTYN +I GL G++ +A DL L++ PDV T++ LI G+ + L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
+MK + P +++ L K I L
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 253/536 (47%), Gaps = 41/536 (7%)
Query: 65 PPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFI 117
P V +N+L+ L K K +D L A L P+L TYN LI+ +CK G F
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEML-ARRLLPSLITYNTLIDGYCKAGNPEKSFK 270
Query: 118 AFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
R+ P+ TFN+L+KGL + +A + ++K G P+ T++ L +G
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330
Query: 178 RTGHTMIALNLFEEMANGNGE---------IGVVCK--------------------PNTV 208
AL ++E + + + +CK PN V
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
Y+T+IDG C++G + A+ M+ + + PD + YN LI C + A++ +M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
+GV PSV T+N+++ + + D+ +L M G PN +Y TL++ C K+
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
A+ + ME G YN+LI+G C ++E+A +EM+ KGI+ +VTYNTL
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
GL ++ A L E+ R G+ D TY + I G G + + L+ ++
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
+ ++ Y+ LI LC ++ LF + L P+++ YN ++ G M+KA +
Sbjct: 631 KPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
L M E + D T++ LI G +++ + +V L+ +M +++ P+A +I+V
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/478 (29%), Positives = 227/478 (47%), Gaps = 24/478 (5%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P +F+IL + N+ + L +G+ N YT +IL+N CK G++
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
GR + PN +N++I G + ++ A ++ G +P+ + YN LI C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 179 TGHTMIALNLFEEMANGNGEIGVV----CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMK 234
G EM N E+ + P+ TY+ +I G ++ DK + +M+
Sbjct: 437 LG----------EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 235 DENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMD 294
D P+VV+Y +LI+ LC + EA+ + +M D+GV P V +N+++D C K++
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 295 EASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI 354
+A R M+++G+ N TYNTL+DG + GK++ AE+L + G K D +YN LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 355 NGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVA 414
+GY V+ ++LY EM GIKPT+ TY+ L + L +E +LF EM +
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMS---LK 662
Query: 415 ADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
D Y + +G + +A L + + LD YN LI G K G+L L
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 475 FCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGF 532
+ + P TYNI+++G C A + +M+E DV + L+ G
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 213/455 (46%), Gaps = 44/455 (9%)
Query: 71 NILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILR 124
+ILL +L K + R A GL PN YN +I+ +C+ G + + + +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 125 SCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMI 184
P+ +N LI+ + A K+K G P+V TYN LI G R
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 185 ALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVT 244
++ +EM + NG + PN V+Y T+I+ LCK + +A+ + M+D ++P V
Sbjct: 478 CFDILKEMED-NGTM-----PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
YN LI G C +A R EM+ +G++ ++VT+N ++D L K+ EA LL +
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILI---------- 354
++G++P+ TYN+L+ G+ G + R L+ M+ G K +Y++LI
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651
Query: 355 -----------------NG----YCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
NG Y + ++E+A +L ++M+ K I TYN+L LG
Sbjct: 652 TERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
++ ++ L DEM + + TY + G C+ + A +R ++ LD+
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVC 771
Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
N L+ GL + R K A E+ S +G ++ +V
Sbjct: 772 IGNELVSGLKEEWRSKEA-EIVISEMNGRMLGDVT 805
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 171/357 (47%), Gaps = 16/357 (4%)
Query: 58 LRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGR 111
+++ P V ++NIL+ + +D + G PN+ +Y LINC CK +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
+ I + +P +N LI G ++ +I +A ++ G E N++TYNT
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
LI+GL TG A +L E++ KP+ TY+++I G G V + AL+
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
+MK I P + TY+ LI LC +RLF EM ++P ++ +N ++ +
Sbjct: 624 EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679
Query: 292 KMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYN 351
M++A L M+++ + + TYN+L+ G +GK+ L M + + + +YN
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 352 ILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
I++ G+C+ K+ A YREM KG V N L GL E + + A + EM
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 3/242 (1%)
Query: 332 EELFG--SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
+ELF S+ S KHD SY +L ++K + EA L+ + ++GI P+ + L
Sbjct: 93 KELFSAFSLSSPSLKHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLL 151
Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCE 449
L + Q + +F + Y I K + + +ELF ++ +
Sbjct: 152 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY 211
Query: 450 LDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDL 509
+ YN LIDGLCK R+ A +LF + L+P+++TYN +I G C G +K+ +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 510 FLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
M+ + P +ITF+ L+ G + +L +MK+ +PDA SI+ D
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 570 NE 571
NE
Sbjct: 332 NE 333
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 229/420 (54%), Gaps = 6/420 (1%)
Query: 94 PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
P+++ YN LIN FCK+ R+ R+ F+P+ T+N +I L + ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
+L + C+P VITY LI G AL L +EM + KP+ TY+TI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269
Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
I G+CKEG VD+A + ++ + PDV++YN L+ L + W E ++L +M +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
P+VVT+++++ LC++ K++EA LL LM ++G+ P+A +Y+ L+ FC G+++ A E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
+M S GC D V+YN ++ CKN + ++AL ++ ++ G P +YNT+F L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQ 453
AL + EM +G+ D TY + I LC+ G + EA EL +R + +
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 454 AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDM 513
YN ++ G CK+ R++ A + S+ PN TY ++I+G+ G +A +L D+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 7/459 (1%)
Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
C+ G ++R + P+ LIKG I +A + L+ FG +P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
YN LING C+ A + + M + + P+TVTY+ +I LC G +D A
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
+ Q+ +N P V+TY LI +EA +L EM+ +G++P + T+N I+
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
+CK +D A ++ + +G P+ +YN L+ GK E+L M S C +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
V+Y+ILI C++ ++EEA++L + M KG+ P +Y+ L +++ A++ +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
M DG D Y T + LCKNG +A+E+F L + C + +YN + L SG
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
A + + + P+ +TYN MI LC +G +D+A +L +DM P V+T++
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
+++ GF + + +L M P+ + +++++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 212/431 (49%), Gaps = 10/431 (2%)
Query: 137 LIKGLHAESR---IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
++K H R +E+ L + G P+VI LI G + A+ + E +
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE 151
Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
+P+ Y+ +I+G CK +D A + +M+ ++ +PD VTYN +I LC
Sbjct: 152 K-------FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
+ A ++ +++ QP+V+T+ ++++ +DEA +L+D M+ RG++P+
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
TYNT++ G C G ++RA E+ ++E GC+ D +SYNIL+ + EE L +M
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
S+ P VVTY+ L L ++E A+ L M+ G+ D +Y I C+ G +
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
A+E T+ C DI YN ++ LCK+G+ A E+F L PN +YN M
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
L + G +A + L+M N PD IT++ +I R + ELL M+ +
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 554 MPDASIVSIVV 564
P +IV+
Sbjct: 505 HPSVVTYNIVL 515
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 205/410 (50%), Gaps = 6/410 (1%)
Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
IL P+ +N+LI G +RI +A + ++++ P+ +TYN +I LC G
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
+AL + ++ + N C+P +TY+ +I+ EG VD+A L +M + PD
Sbjct: 209 LDLALKVLNQLLSDN------CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
+ TYN++I G+C + A + + +G +P V+++N+++ L K +E +L+
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
M PN TY+ L+ C GKI A L M+ G D SY+ LI +C+
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 362 EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYT 421
++ A+ M+S G P +V YNT+ L + + + AL++F ++ G + ++ +Y
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
T L +G I A+ + + + D YN +I LC+ G + A+EL +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHG 531
P+VVTYNI++ G C +++ A ++ M N P+ T+ +LI G
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 191/410 (46%), Gaps = 35/410 (8%)
Query: 65 PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V ++N L+ K D R+ + P+ TYNI+I C G++ L
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
++L P T+ LI+ E + EA L ++ + G +P++ TYNT+I G+C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 179 TGHTMIALNLFEEMANGNGEIGVV-----------------------------CKPNTVT 209
G A + + E V+ C PN VT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
YS +I LC++G +++A L MK++ + PD +Y+ LI C + A M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
G P +V +N ++ LCKN K D+A + + + G PN+ +YNT+ G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
RA + M S G D+++YN +I+ C+ V+EA L +M S P+VVTYN +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
LG + H++E A+ + + M +G + TYT I+G+ GY EA+EL
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 175/343 (51%), Gaps = 4/343 (1%)
Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
+ H C + ++ E+ L M+ +G P V+ ++ R + +A R+++++ + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 308 VRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEAL 367
+P+ YN L++GFC M +I+ A + M S D V+YNI+I C +++ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 368 SLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGL 427
+ +++S +PTV+TY L V+ ALKL DEM G+ D TY T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 428 CKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNV 487
CK G + A E+ R L + CE D+ +YN L+ L G+ + +L + PNV
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 488 VTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHK 547
VTY+I+I LC DG++++A +L M+E PD ++D LI F R E L
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 548 MKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEVG 590
M +PD + V+ L KN + ++L F + GEVG
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIF---GKLGEVG 433
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 181/360 (50%), Gaps = 1/360 (0%)
Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
C+ G ++ L M + NPDV+ LI G + +A R+ +E++++ QP V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158
Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
+N +++ CK ++D+A+R+LD M + P+ TYN ++ C GK++ A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
+ S C+ ++Y ILI V+EAL L EM+S+G+KP + TYNT+ G+ +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
V+ A ++ ++ G D +Y + L G E +L + KC+ ++ Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
LI LC+ G+++ A L + L P+ +Y+ +I C +G++D A + M +
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
PD++ ++ ++ + + + E+ K+ E P++S + + L + +++L
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 179/354 (50%), Gaps = 16/354 (4%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V ++ IL+ + D L + GL P+++TYN +I CK G V F
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 119 FGRI-LRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
+ L+ C P+ ++N L++ L + + E L TK+ + C+PNV+TY+ LI LC
Sbjct: 286 VRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
R G A+NL + M E G+ P+ +Y +I C+EG +D A M +
Sbjct: 345 RDGKIEEAMNLLKLMK----EKGLT--PDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
PD+V YN+++ LC ++A +F ++ + G P+ ++N + L + A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGY 357
++ M+ G+ P+ TYN+++ C G ++ A EL M S V+YNI++ G+
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 358 CKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL-FEIHQVEHALKLFDEMQR 410
CK +E+A+++ MV G +P TY L G+ F ++ E A++L +++ R
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVR 571
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 247/485 (50%), Gaps = 6/485 (1%)
Query: 86 RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAES 145
++ G N Y+YN LI+ K + + R++ F P+ T++SL+ GL
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 146 RIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP 205
I L +++ G +PNV T+ I L R G A + + M + C P
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGP 291
Query: 206 NTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
+ VTY+ +ID LC +D AK +F +MK PD VTY +L+ D + K+ +
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 266 IEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLM 325
EM G P VVTF +++D LCK EA LD+M +G+ PN TYNTL+ G +
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 326 GKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTY 385
+++ A ELFG+MES+G K +Y + I+ Y K+ + AL + +M +KGI P +V
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 386 NTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRI 445
N L + + A ++F ++ G+ D+ TY + K G I EA++L +
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 446 LKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDK 505
CE D+ N LI+ L K+ R+ AW++F + L P VVTYN ++ GL +G++ +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 506 ARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
A +LF M + P+ ITF+ L + +E + ++L KM + +PD + ++
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 566 LLVKN 570
LVKN
Sbjct: 652 GLVKN 656
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 243/513 (47%), Gaps = 17/513 (3%)
Query: 65 PPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P + + N L SLAK K L GL P+ TYN+++ C+ K+G +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
++ + P+ NSLI L+ R+ EA +F ++K +P V+TYNTL+ GL +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
G A+ LFE M C PNT+T++T+ D LCK V A + +M D
Sbjct: 586 NGKIQEAIELFEGMVQKG------CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
PDV TYN++I GL EA F M + V P VT ++ + K +++A +
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 299 LL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG-CKHDDVSYNILING 356
++ + + +P + L+ I+ A + + G C+ D +I
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 357 YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
CK+ V A +L+ + G++P + TYN L GL E +E A +F +++ G
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
D TY +D K+G I E EL++ + +CE + +N +I GL K+G + A +L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 476 CSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
L P TY +I GL G++ +A+ LF M + P+ +++LI+GF +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 535 INEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
E L +M ++ V PD S++VD L
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 236/476 (49%), Gaps = 13/476 (2%)
Query: 65 PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P + +++ L+ L K + D+ + GL PN+YT+ I I + G+++ +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
R+ P+ T+ LI L ++ A +F K+K +P+ +TY TL++
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
+ EM +G + P+ VT++ ++D LCK G +A M+D+ I
Sbjct: 341 NRDLDSVKQFWSEMEK-DGHV-----PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
P++ TYN+LI GL + ++A LF M GV+P+ T+ V +D K+ A
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
+ M +G+ PN N + G+ A+++F ++ +G D V+YN+++ Y
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
K E++EA+ L EM+ G +P V+ N+L L++ +V+ A K+F M+ +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
TY T + GL KNG I EA+ELF + C + +N L D LCK+ + A ++ +
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
VP+V TYN +I GL +GQ+ +A F M++ PD +T L+ G ++
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVK 689
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 222/438 (50%), Gaps = 6/438 (1%)
Query: 133 TFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM 192
T+ ++ K L + + +A K++ FG N +YN LI+ L ++ A+ ++ M
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 193 ANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
I +P+ TYS+++ GL K +D L +M+ + P+V T+ I L
Sbjct: 215 ------ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNA 312
A NEA + M D+G P VVT+ V++D LC RK+D A + + M +P+
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 313 CTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYRE 372
TY TL+D F ++ ++ + ME G D V++ IL++ CK EA
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 373 MVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGY 432
M +GI P + TYNTL GL +H+++ AL+LF M+ GV TY FID K+G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 433 IIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNI 492
+ A+E F ++ +I A N + L K+GR + A ++F L LVP+ VTYN+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 493 MIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKK 552
M++ G++D+A L +M EN PDVI + LI+ + + + ++ +MKE K
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 553 VMPDASIVSIVVDLLVKN 570
+ P + ++ L KN
Sbjct: 569 LKPTVVTYNTLLAGLGKN 586
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 267/556 (48%), Gaps = 58/556 (10%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNIL 102
EA IF Y L+ P ++N+++ +K D + + G P++ N L
Sbjct: 486 EAKQIF-YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
IN K RV + F R+ P T+N+L+ GL +I EA LF + GC
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 163 EPNVITYNTLINGLCRTGHTMIALN-LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
PN IT+NTL + LC+ +AL LF+ M G C P+ TY+TII GL K G
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-------CVPDVFTYNTIIFGLVKNG 657
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA---------------NDWNEAKRLFI 266
V +A F QMK + + PD VT +L+ G+ A N ++ LF
Sbjct: 658 QVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716
Query: 267 E------MMDQGVQPSVVTFN-----------------VIMDELCKNRKMDEASRLLDLM 303
E + + G+ + V+F+ I+ CK+ + A L +
Sbjct: 717 EDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 304 VQR-GVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
+ GV+P TYN L+ G I A+++F ++S GC D +YN L++ Y K+ +
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR-TYT 421
++E LY+EM + + +T+N + GL + V+ AL L+ ++ D + T TY
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 422 TFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHG 481
IDGL K+G + EA +LF + C + YN LI+G K+G A LF +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 482 VLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKV 541
+ P++ TY++++ LC G++D+ F +++E+ PDV+ ++++I+G + + +
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 542 NELLHKMKEKK-VMPD 556
L ++MK + + PD
Sbjct: 1016 LVLFNEMKTSRGITPD 1031
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 257/571 (45%), Gaps = 72/571 (12%)
Query: 53 IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCF 106
+F+ M P V+ + LL + N+ D+ + G P++ T+ IL++
Sbjct: 315 VFEKMKTGRHKPDRVT-YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
CK G F + PN T+N+LI GL R+ +A LF +++ G +P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
TY I+ ++G ++ AL FE+M PN V + + L K G +A
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKG------IAPNIVACNASLYSLAKAGRDREA 487
Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
K +F +KD + PD VTYN ++ + +EA +L EMM+ G +P V+ N +++
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
L K ++DEA ++ M + ++P TYNTL+ G GKI A ELF M GC +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
+++N L + CKN EV AL + +M+ G P V TYNT+ GL + QV+ A+ F
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC--------- 457
+M++ V D T T + G+ K I +A ++ YNC
Sbjct: 668 QMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNF----------LYNCADQPANLFW 716
Query: 458 -----------------------LIDGLCKSG---------------RLKFAWELFCSLP 479
+ +G+C+ G + A LF
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776
Query: 480 HGVLV-PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
+ V P + TYN++I GL ++ A+D+FL ++ PDV T++ L+ + + +
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
++ EL +M + + +IV+ LVK
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVK 867
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 255/560 (45%), Gaps = 85/560 (15%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNI 101
+EA+ +F M M P V ++N LLA L KN + G PN T+N
Sbjct: 555 DEAWKMFMRMKEMKLKPT-VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA-- 159
L +C CK V+L +++ P+ T+N++I GL ++ EA F ++K
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 160 -------------------------------FGC--EPNVITYNTLI------------- 173
+ C +P + + LI
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 174 --------NGLCRTGHTMI---------------ALNLFEEMANGNGEIGVVCKPNTVTY 210
NG+CR G +++ A LFE+ ++GV +P TY
Sbjct: 734 SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--QPKLPTY 788
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
+ +I GL + ++ A+ +FLQ+K PDV TYN L+ + +E L+ EM
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
+ + +T N+++ L K +D+A L DLM R P ACTY L+DG G++
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLF 389
A++LF M GC+ + YNILING+ K E + A +L++ MV +G++P + TY+ L
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 390 LGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK-C 448
L + +V+ L F E++ G+ D Y I+GL K+ + EA+ LF ++ +
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
D+ YN LI L +G ++ A +++ + L PNV T+N +I+G G+ + A
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 509 LFLDMEENAAAPDVITFDML 528
++ M +P+ T++ L
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQL 1108
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 223/491 (45%), Gaps = 48/491 (9%)
Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVI----TYNTLING 175
G ++R P+ ++ + +GL + + + F+ K+ N++ T N ++
Sbjct: 71 GSMIRKSSKPDLSSSEEVTRGLKS---FPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEA 127
Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKD 235
L G +F+ M + K +T TY TI L +G + +A +M++
Sbjct: 128 LRVDGKLEEMAYVFDLMQKR------IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 236 ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDE 295
+ +YN LIH L + EA ++ M+ +G +PS+ T++ +M L K R +D
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 296 ASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
LL M G++PN T+ + GKIN A E+ M+ GC D V+Y +LI+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 356 GYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAA 415
C ++++ A ++ +M + KP VTY TL + ++ + + EM++DG
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 416 DTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELF 475
D T+T +D LCK G EA + +R ++ YN LI GL + RL A ELF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 476 CSLPH-GV----------------------------------LVPNVVTYNIMIQGLCND 500
++ GV + PN+V N + L
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 501 GQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIV 560
G+ +A+ +F +++ PD +T++M++ + ++ E + +LL +M E PD +V
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 561 SIVVDLLVKNE 571
+ +++ L K +
Sbjct: 542 NSLINTLYKAD 552
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 153/299 (51%), Gaps = 14/299 (4%)
Query: 65 PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V+++N LL + K+ D ++ N T+NI+I+ K G V
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 119 FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
+ ++ F+P A T+ LI GL R+ EA LF + +GC PN YN LING
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
+ G A LF+ M + GV +P+ TYS ++D LC G VD+ F ++K+
Sbjct: 938 KAGEADAACALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEM-MDQGVQPSVVTFNVIMDELCKNRKMDEA 296
+NPDVV YN +I+GL ++ EA LF EM +G+ P + T+N ++ L ++EA
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 297 SRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILIN 355
++ + + + G+ PN T+N L+ G+ L GK A ++ +M + G + +Y L N
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 36/384 (9%)
Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ-GVQPSVVTFNVIMDELCKNRKMDEASR 298
PD+ + + GL D + + F + + + T N +++ L + K++E +
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
+ DLM +R ++ + TY T+ + G + +A M G + SYN LI+
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQR-------- 410
K++ EA+ +YR M+ +G +P++ TY++L +GL + ++ + L EM+
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 411 ---------------------------DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
+G D TYT ID LC + A E+F +
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
+ + + D Y L+D + L + + + VP+VVT+ I++ LC G
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 504 DKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
+A D M + P++ T++ LI G +R++ EL M+ V P A +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 564 VDLLVKNEISLKSLPSFLVQERQG 587
+D K+ S+ +L +F + +G
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKG 463
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 245/465 (52%), Gaps = 7/465 (1%)
Query: 99 YNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLK 158
Y ++IN + + ++L F ++ + F P + FN L+ + S + + F + K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 159 AFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLC 218
+ +V ++ LI G C G + +L E+ E G PN V Y+T+IDG C
Sbjct: 157 S-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT----EFGF--SPNVVIYTTLIDGCC 209
Query: 219 KEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
K+G ++KAK LF +M + + TY LI+GL + ++ +M + GV P++
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
T+N +M++LCK+ + +A ++ D M +RGV N TYNTL+ G C K+N A ++ M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
+S G + ++YN LI+G+C ++ +ALSL R++ S+G+ P++VTYN L G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
A K+ EM+ G+ TYT ID ++ + +A++L ++ L D+ Y+ L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAA 518
I G C G++ A LF S+ PN V YN MI G C +G +A L +MEE
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 519 APDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIV 563
AP+V ++ +I + + + L+ KM + + P SI+S++
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 202/383 (52%), Gaps = 12/383 (3%)
Query: 67 VSSFNILLASLAK----NKHYDTRLNAT--GLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
V SF IL+ + K +D + T G PN+ Y LI+ CK G + F
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
+ + N T+ LI GL + ++ K++ G PN+ TYN ++N LC+ G
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDG 282
Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
T A +F+EM E GV C N VTY+T+I GLC+E +++A + QMK + INP
Sbjct: 283 RTKDAFQVFDEMR----ERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
+++TYN+LI G C +A L ++ +G+ PS+VT+N+++ C+ A++++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
M +RG++P+ TY L+D F + +A +L SME +G D +Y++LI+G+C
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
++ EA L++ MV K +P V YNT+ LG + ALKL EM+ +A + +Y
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 421 TTFIDGLCKNGYIIEAVELFRTL 443
I+ LCK EA L +
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKM 539
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 207/415 (49%), Gaps = 11/415 (2%)
Query: 65 PPVSSFNILLASLAKNKHYDTRL-----NATGLFPNLYTYNILINCFCKIGRVSLGFIAF 119
P + FN LL + + ++ N + + ++Y++ ILI C+ G + F
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLL 186
Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
+ F+PN + +LI G + I +A LF ++ G N TY LINGL +
Sbjct: 187 IELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKN 246
Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
G ++E+M E GV PN TY+ +++ LCK+G A +F +M++ ++
Sbjct: 247 GVKKQGFEMYEKMQ----EDGVF--PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
++VTYN+LI GLC NEA ++ +M G+ P+++T+N ++D C K+ +A L
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
+ RG+ P+ TYN L+ GFC G + A ++ ME G K V+Y ILI+ + +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
+ +E+A+ L M G+ P V TY+ L G Q+ A +LF M +
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480
Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWEL 474
Y T I G CK G A++L + + + ++ +Y +I+ LCK + K A L
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 181/343 (52%), Gaps = 6/343 (1%)
Query: 75 ASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATF 134
+ K K + GL N TY +LIN K G GF + ++ PN T+
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 135 NSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMAN 194
N ++ L + R +A +F +++ G N++TYNTLI GLCR A + ++M +
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 195 GNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCH 254
PN +TY+T+IDG C G + KA +L +K ++P +VTYN L+ G C
Sbjct: 332 DG------INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
D + A ++ EM ++G++PS VT+ +++D ++ M++A +L M + G+ P+ T
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 315 YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMV 374
Y+ L+ GFC+ G++N A LF SM C+ ++V YN +I GYCK AL L +EM
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 375 SKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADT 417
K + P V +Y + L + + + A +L ++M G+ T
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 171/321 (53%), Gaps = 14/321 (4%)
Query: 69 SFNILLASLAKN-------KHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGR 121
++ +L+ L KN + Y+ ++ G+FPNLYTYN ++N CK GR F F
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYE-KMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 122 ILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGH 181
+ + N T+N+LI GL E ++ EA + ++K+ G PN+ITYNTLI+G C G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 182 TMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPD 241
AL+L ++ + P+ VTY+ ++ G C++G A + +M++ I P
Sbjct: 354 LGKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 242 VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLD 301
VTY LI +++ +A +L + M + G+ P V T++V++ C +M+EASRL
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 302 LMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNK 361
MV++ PN YNT++ G+C G RA +L ME + SY +I CK +
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 362 EVEEALSLYREMVSKGIKPTV 382
+ +EA L +M+ GI P+
Sbjct: 528 KSKEAERLVEKMIDSGIDPST 548
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 204/409 (49%), Gaps = 7/409 (1%)
Query: 169 YNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKA 228
Y +IN ++ ++++ F EM + NG + P + ++ ++ + ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVD-NGFV-----PGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 229 LFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELC 288
F + K + + DV ++ LI G C A + ++ L IE+ + G P+VV + ++D C
Sbjct: 151 FFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 289 KNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDV 348
K ++++A L M + G+ N TY L++G G + E++ M+ G +
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 349 SYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
+YN ++N CK+ ++A ++ EM +G+ +VTYNTL GL ++ A K+ D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
+ DG+ + TY T IDG C G + +A+ L R L+ + YN L+ G C+ G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
A ++ + + P+ VTY I+I M+KA L L MEE PDV T+ +L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
IHGF + ++ + L M EK P+ I + ++ K S ++L
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 181/377 (48%), Gaps = 1/377 (0%)
Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
+I G F + L + E Y +I+ + N + F EM+D G
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
P FN ++ + + ++ + + V + ++ L+ G C G+I ++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
+L + G + V Y LI+G CK E+E+A L+ EM G+ TY L GL
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
F+ + +++++MQ DGV + TY ++ LCK+G +A ++F +R +I
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
YN LI GLC+ +L A ++ + + PN++TYN +I G C G++ KA L D
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI 572
++ +P ++T+++L+ GF R + S +++ +M+E+ + P +I++D +++
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 573 SLKSLPSFLVQERQGEV 589
K++ L E G V
Sbjct: 424 MEKAIQLRLSMEELGLV 440
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 262/519 (50%), Gaps = 12/519 (2%)
Query: 53 IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCF 106
+F M+ P V + + LL L K +H+ + + G+ P++Y Y +I
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
C++ +S + + N +N LI GL + ++ EA + L +P+V
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 167 ITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKA 226
+TY TL+ GLC+ I L + +EM + + P+ S++++GL K G +++A
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 227 KALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
L ++ D ++P++ YN+LI LC ++EA+ LF M G++P+ VT+++++D
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHD 346
C+ K+D A L MV G++ + YN+L++G C G I+ AE M + +
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 347 DVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFD 406
V+Y L+ GYC ++ +AL LY EM KGI P++ T+ TL GLF + A+KLF+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 407 EMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSG 466
EM V + TY I+G C+ G + +A E + + D +Y LI GLC +G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 467 RLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFD 526
+ A L G N + Y ++ G C +G++++A + +M + D++ +
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 527 MLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
+LI G ++ + LL +M ++ + PD I + ++D
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 244/489 (49%), Gaps = 14/489 (2%)
Query: 87 LNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESR 146
+ L P + T + L++ K L F ++ P+ + +I+ L
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 147 IMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPN 206
+ A + ++A GC+ N++ YN LI+GLC+ A+ + +++A G KP+
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA------GKDLKPD 296
Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDE----NINPDVVTYNSLIHGLCHANDWNEAK 262
VTY T++ GLCK + + L+M DE +P +SL+ GL EA
Sbjct: 297 VVTYCTLVYGLCKV----QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
L ++D GV P++ +N ++D LCK RK EA L D M + G+RPN TY+ L+D F
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
C GK++ A G M G K YN LING+CK ++ A EM++K ++PTV
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
VTY +L G ++ AL+L+ EM G+A T+TT + GL + G I +AV+LF
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
+ + + YN +I+G C+ G + A+E + +VP+ +Y +I GLC GQ
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
+A+ + + + I + L+HGF R + + + +M ++ V D +
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 563 VVDLLVKNE 571
++D +K++
Sbjct: 653 LIDGSLKHK 661
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/595 (28%), Positives = 276/595 (46%), Gaps = 90/595 (15%)
Query: 38 REGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNAT------G 91
+E +I + +E C LR PS VSS L+ L K + LN G
Sbjct: 311 QEFEIGLEMMDEMLC-----LRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 92 LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
+ PNL+ YN LI+ CK + + F R+ + PN T++ LI ++ A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYS 211
+ ++ G + +V YN+LING C+ G A EM N E P VTY+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE------PTVVTYT 476
Query: 212 TIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQ 271
+++ G C +G ++KA L+ +M + I P + T+ +L+ GL A +A +LF EM +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 272 GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRA 331
V+P+ VT+NV+++ C+ M +A L M ++G+ P+ +Y L+ G CL G+ + A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 332 EELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL--- 388
+ + C+ +++ Y L++G+C+ ++EEALS+ +EMV +G+ +V Y L
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 389 ---------FLGLF-EIHQ----------------------VEHALKLFDEMQRDGVAAD 416
F GL E+H + A ++D M +G +
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 417 TRTYTTFIDGLCKNGYIIEAVELFRTLR-----------------ILKCELDIQ------ 453
TYT I+GLCK G++ EA L ++ + K E+D+Q
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776
Query: 454 ------------AYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDG 501
YN LI G C+ GR++ A EL + + P+ +TY MI LC
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 502 QMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
+ KA +L+ M E PD + ++ LIHG E K EL ++M + ++P+
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 247/515 (47%), Gaps = 12/515 (2%)
Query: 67 VSSFNILLASLAKNKHY------DTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
+ +N+L+ L K + L L P++ TY L+ CK+ +G
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
+L F+P+ A +SL++GL +I EA L ++ FG PN+ YN LI+ LC+
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
A LF+ M G+IG+ +PN VTYS +ID C+ G +D A + +M D +
Sbjct: 382 KFHEAELLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
V YNSLI+G C D + A+ EM+++ ++P+VVT+ +M C K+++A RL
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
M +G+ P+ T+ TL+ G G I A +LF M K + V+YN++I GYC+
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
++ +A +EM KGI P +Y L GL Q A D + + + Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
T + G C+ G + EA+ + + + +LD+ Y LIDG K K + L +
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
L P+ V Y MI G +A ++ M P+ +T+ +I+G + ++
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 541 VNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLK 575
L KM+ +P+ +D+L K E+ ++
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 181/396 (45%), Gaps = 41/396 (10%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLNATGLF---------PNLYTYNILINCFCKIGRVSLG 115
P + +F LL+ L + +A LF PN TYN++I +C+ G +S
Sbjct: 505 PSIYTFTTLLSGLFRAGLIR---DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 116 FIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLING 175
F + P+ ++ LI GL + EA L CE N I Y L++G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 176 LCRTGHTMIALNLFEEMANGNGEIGVVC-----------------------------KPN 206
CR G AL++ +EM ++ +VC KP+
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 207 TVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFI 266
V Y+++ID K G +A ++ M +E P+ VTY ++I+GLC A NEA+ L
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 267 EMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG 326
+M P+ VT+ +D L K + + L + +G+ N TYN L+ GFC G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 327 KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYN 386
+I A EL M G D ++Y +IN C+ +V++A+ L+ M KGI+P V YN
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 387 TLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
TL G ++ A +L +EM R G+ + +T T
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 123/302 (40%), Gaps = 56/302 (18%)
Query: 342 GCKHDDVSYNILING--------------------------------------------- 356
G H S+ ILI+
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158
Query: 357 -------YCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEM 408
Y +++ V + + +++ M++K + P V T + L GL + A++LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 409 QRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRL 468
G+ D YT I LC+ + A E+ + C+++I YN LIDGLCK ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 469 KFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDML 528
A + L L P+VVTY ++ GLC + + ++ +M +P L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 529 IHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGE 588
+ G + + + L+ ++ + V P+ + + ++D L K K + L+ +R G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR---KFHEAELLFDRMGK 395
Query: 589 VG 590
+G
Sbjct: 396 IG 397
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 277/577 (48%), Gaps = 53/577 (9%)
Query: 34 DLTTREGDINVITPNEAFCIFDYML-RMHPS--PPPVSSFNILLASLAKNKHYDT----- 85
D+ T INV+ +F Y++ +M S P + ++N +L K +
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251
Query: 86 -RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAE 144
+ + G+ ++ TYN+LI+ C+ R++ G++ + + PN T+N+LI G E
Sbjct: 252 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 311
Query: 145 SRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVC 203
+++ A+ L ++ +FG PN +T+N LI+G G+ AL +F M A G
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-------L 364
Query: 204 KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKR 263
P+ V+Y ++DGLCK D A+ +++MK + +TY +I GLC +EA
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 264 LFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFC 323
L EM G+ P +VT++ +++ CK + A ++ + + G+ PN Y+TL+ C
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 324 LMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVV 383
MG + A ++ +M G D ++N+L+ CK +V EA R M S GI P V
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 384 TYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTL 443
+++ L G + A +FDEM + G TY + + GLCK G++ EA + ++L
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Query: 444 RILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQM 503
+ +D YN L+ +CKSG L A LF + ++P+ TY +I GLC G+
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 664
Query: 504 ---------DKARD----------LFLD-----------------MEENAAAPDVITFDM 527
+AR F+D M+ PD++T +
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724
Query: 528 LIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
+I G+ R+ + K N+LL +M + P+ + +I++
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 761
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 245/483 (50%), Gaps = 12/483 (2%)
Query: 110 GRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITY 169
G+ S F A R C N + ++ LI+ E I ++ +F + +G P+V T
Sbjct: 103 GKSSFVFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTC 161
Query: 170 NTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKAL 229
N ++ + ++G + + +EM +C P+ T++ +I+ LC EG +K+ L
Sbjct: 162 NAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKSSYL 215
Query: 230 FLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCK 289
+M+ P +VTYN+++H C + A L M +GV V T+N+++ +LC+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 290 NRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVS 349
+ ++ + LL M +R + PN TYNTL++GF GK+ A +L M S G + V+
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 350 YNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQ 409
+N LI+G+ +EAL ++ M +KG+ P+ V+Y L GL + + + A + M+
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 410 RDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLK 469
R+GV TYT IDGLCKNG++ EAV L + + DI Y+ LI+G CK GR K
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 470 FAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLI 529
A E+ C + L PN + Y+ +I C G + +A ++ M D TF++L+
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 530 HGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEI-SLKSLPSFLVQERQGE 588
+ + ++ E + M ++P+ ++ D L+ S + L +F V + +
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPN----TVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 589 VGE 591
VG
Sbjct: 572 VGH 574
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 252/528 (47%), Gaps = 39/528 (7%)
Query: 92 LFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAA 151
+ PN TYN LIN F G+V + +L +PN TFN+LI G +E EA
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353
Query: 152 ALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA-NG--------NGEIGVV 202
+F ++A G P+ ++Y L++GLC+ +A + M NG G I +
Sbjct: 354 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413
Query: 203 CK--------------------PNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDV 242
CK P+ VTYS +I+G CK G AK + ++ ++P+
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473
Query: 243 VTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDL 302
+ Y++LI+ C EA R++ M+ +G TFNV++ LCK K+ EA +
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 533
Query: 303 MVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKE 362
M G+ PN +++ L++G+ G+ +A +F M +G +Y L+ G CK
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593
Query: 363 VEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTT 422
+ EA + + + V YNTL + + + A+ LF EM + + D+ TYT+
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653
Query: 423 FIDGLCKNGYIIEAVELFRTLRILKCELDIQA-YNCLIDGLCKSGRLK---FAWELFCSL 478
I GLC+ G + A+ + L + Y C +DG+ K+G+ K + E +L
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
H P++VT N MI G G+++K DL +M P++ T+++L+HG+ + +
Sbjct: 714 GH---TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770
Query: 539 SKVNELLHKMKEKKVMPDA-SIVSIVVDLLVKN--EISLKSLPSFLVQ 583
S L + ++PD + S+V+ + N EI LK L +F+ +
Sbjct: 771 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 230/459 (50%), Gaps = 9/459 (1%)
Query: 91 GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
G P++YT N ++ K G + +L+ P+ ATFN LI L AE ++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
+ L K++ G P ++TYNT+++ C+ G A+ L + M + G VC TY
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVC-----TY 266
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
+ +I LC+ + K L M+ I+P+ VTYN+LI+G + A +L EM+
Sbjct: 267 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 326
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
G+ P+ VTFN ++D EA ++ +M +G+ P+ +Y L+DG C + +
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 386
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
A + M+ G ++Y +I+G CKN ++EA+ L EM GI P +VTY+ L
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
G ++ + + A ++ + R G++ + Y+T I C+ G + EA+ ++ + +
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
D +N L+ LCK+G++ A E + ++PN V+++ +I G N G+ KA +F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 511 LDMEENAAAPDVITFDMLIHGFIR---INEPSKVNELLH 546
+M + P T+ L+ G + + E K + LH
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 228/493 (46%), Gaps = 9/493 (1%)
Query: 97 YTYNILINCFCKIGRVSLGFIAFGRILRS-CFTPNAATFNSLIKGLHAESRIMEAAALFT 155
+T+N+L+ CK G+V+ F R + S PN +F+ LI G ++A ++F
Sbjct: 509 FTFNVLVTSLCKAGKVAEAE-EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 156 KLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIID 215
++ G P TY +L+ GLC+ GH A + + V +TV Y+T++
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH------AVPAAVDTVMYNTLLT 621
Query: 216 GLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG-VQ 274
+CK G + KA +LF +M +I PD TY SLI GLC A E +G V
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681
Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
P+ V + +D + K + + M G P+ T N ++DG+ MGKI + +L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
M + + +YNIL++GY K K+V + LYR ++ GI P +T ++L LG+ E
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801
Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
+ +E LK+ GV D T+ I C NG I A +L + + L LD
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
+ ++ L ++ R + + + + + P Y +I GLC G + A + +M
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921
Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
+ P + ++ + + + LL M + K++P + + ++ L KN +
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVI 981
Query: 575 KSLPSFLVQERQG 587
++L +V G
Sbjct: 982 EALELRVVMSNCG 994
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 234/492 (47%), Gaps = 14/492 (2%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH------YDTRLNATGLFPNLYTYNIL 102
+AF +FD M ++ P ++ LL L K H + L+A + YN L
Sbjct: 561 KAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG- 161
+ CK G ++ FG +++ P++ T+ SLI GL + + + A + +A G
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
PN + Y ++G+ + G + E+M N + P+ VT + +IDG + G
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMG 733
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
++K L +M ++N P++ TYN L+HG D + + L+ ++ G+ P +T +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
++ +C++ ++ ++L + RGV + T+N L+ C G+IN A +L M S+
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
G D + + +++ +N +E+ + EM +GI P Y L GL + ++ A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
+ +EM + + + L K G EA L R + +K I ++ L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
CK+G + A EL + + L ++V+YN++I GLC G M A +L+ +M+ + +
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 522 VITFDMLIHGFI 533
T+ LI G +
Sbjct: 1034 ATTYKALIRGLL 1045
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 47 PNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYN 100
+EA + +ML+M P ++SF L+ KN + L + GL +L +YN
Sbjct: 945 ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTK 156
+LI C G ++L F + + F NA T+ +LI+GL A A + K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 242/496 (48%), Gaps = 13/496 (2%)
Query: 67 VSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFG 120
+ +N LL SLA+ K + + PN+YTYN ++N +CK+G V
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 121 RILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTG 180
+I+ + P+ T+ SLI G + A +F ++ GC N + Y LI+GLC
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 181 HTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINP 240
A++LF +M + C P TY+ +I LC +A L +M++ I P
Sbjct: 303 RIDEAMDLFVKMKDDE------CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 241 DVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLL 300
++ TY LI LC + +A+ L +M+++G+ P+V+T+N +++ CK +++A ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 301 DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKN 360
+LM R + PN TYN L+ G+C +++A + M D V+YN LI+G C++
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 361 KEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTY 420
+ A L M +G+ P TY ++ L + +VE A LFD +++ GV + Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 421 TTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPH 480
T IDG CK G + EA + + C + +N LI GLC G+LK A L +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 481 GVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSK 540
L P V T I+I L DG D A F M + PD T+ I + R
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 541 VNELLHKMKEKKVMPD 556
+++ KM+E V PD
Sbjct: 656 AEDMMAKMRENGVSPD 671
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 239/486 (49%), Gaps = 25/486 (5%)
Query: 93 FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAA 152
FP + TY +LI C R S + + PN T+ LI L ++ + +A
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 153 LFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST 212
L ++ G PNVITYN LING C+ G A+++ E M + PNT TY+
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNE 433
Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
+I G CK V KA + +M + + PDVVTYNSLI G C + +++ A RL M D+G
Sbjct: 434 LIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
+ P T+ ++D LCK+++++EA L D + Q+GV PN Y L+DG+C GK++ A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
+ M S C + +++N LI+G C + +++EA L +MV G++PTV T L L
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
+ +HA F +M G D TYTTFI C+ G +++A ++ +R D+
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ----------------- 495
Y+ LI G G+ FA+++ + P+ T+ +I+
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 496 -GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVM 554
+ N + D +L M E++ P+ +++ LI G + ++ M+ + +
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 555 PDASIV 560
+ +V
Sbjct: 793 SPSELV 798
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 221/437 (50%), Gaps = 7/437 (1%)
Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
+N+L+ L + E ++ ++ PN+ TYN ++NG C+ G+ A ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
E G+ P+ TY+++I G C+ +D A +F +M + + V Y LIHGLC
Sbjct: 246 ----EAGL--DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
A +EA LF++M D P+V T+ V++ LC + + EA L+ M + G++PN
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
TY L+D C K +A EL G M G + ++YN LINGYCK +E+A+ + M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
S+ + P TYN L G + V A+ + ++M V D TY + IDG C++G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
A L + D Y +ID LCKS R++ A +LF SL + PNVV Y +
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
I G C G++D+A + M P+ +TF+ LIHG + + L KM + +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 554 MPDASIVSIVVDLLVKN 570
P S +I++ L+K+
Sbjct: 599 QPTVSTDTILIHRLLKD 615
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 239/556 (42%), Gaps = 90/556 (16%)
Query: 65 PPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P + ++ +L+ SL ++ ++ GL PN+ TYN LIN +CK G +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
+ +PN T+N LIKG + +S + +A + K+ P+V+TYN+LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 179 TGHTMIALNLFEEMANG---------NGEIGVVCK--------------------PNTVT 209
+G+ A L M + I +CK PN V
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
Y+ +IDG CK G VD+A + +M +N P+ +T+N+LIHGLC EA L +M+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 270 DQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
G+QP+V T +++ L K+ D A M+ G +P+A TY T + +C G++
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 330 RAEELFGSMESMGCKHDDVSYNILING--------------------------------- 356
AE++ M G D +Y+ LI G
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 357 -------YCKNK-------------EVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
Y K K E + + L +MV + P +Y L LG+ E+
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 397 QVEHALKLFDEMQR-DGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAY 455
+ A K+FD MQR +G++ + + CK EA ++ + + +++
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 456 NCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
LI GL K G + +F +L + + + I+I G+ G ++ +LF ME+
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 516 NAAAPDVITFDMLIHG 531
N T+ +LI G
Sbjct: 895 NGCKFSSQTYSLLIEG 910
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 180/343 (52%), Gaps = 1/343 (0%)
Query: 245 YNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMV 304
YN+L++ L +E K++++EM++ V P++ T+N +++ CK ++EA++ + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 305 QRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
+ G+ P+ TY +L+ G+C ++ A ++F M GC+ ++V+Y LI+G C + ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
EA+ L+ +M PTV TY L L + AL L EM+ G+ + TYT I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
D LC +A EL + ++ YN LI+G CK G ++ A ++ + L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
PN TYN +I+G C + KA + M E PDV+T++ LI G R L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
L M ++ ++PD + ++D L K++ ++ F E++G
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Query: 53 IFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA------TGLFPNLYTYNILINCF 106
+FD+M R P FN LL+ K K ++ G P L + +LI
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 107 CKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNV 166
K G G F +L+ + + + +I G+ + + LF ++ GC+ +
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 167 ITYNTLING 175
TY+ LI G
Sbjct: 902 QTYSLLIEG 910
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 162/558 (29%), Positives = 269/558 (48%), Gaps = 40/558 (7%)
Query: 48 NEAFCIFDYMLRMHP-SPPPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYN 100
++AF F + P + P V +N+LL S K + + + G+ P YT+N
Sbjct: 92 DKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151
Query: 101 ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAF 160
+LI C V F + PN TF L++G + L +++F
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 161 GCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
G PN + YNT+++ CR G + + E+M E G+V P+ VT+++ I LCKE
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR----EEGLV--PDIVTFNSRISALCKE 265
Query: 221 GFVDKAKALFLQMK-DENIN---PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
G V A +F M+ DE + P+ +TYN ++ G C +AK LF + + S
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
+ ++N+ + L ++ K EA +L M +G+ P+ +YN LMDG C +G ++ A+ + G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
M+ G D V+Y L++GYC +V+ A SL +EM+ P T N L L+++
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRIL---------- 446
++ A +L +M G DT T +DGLC +G + +A+E+ + +R+
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 447 -------------KCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
C D+ Y+ L++GLCK+GR A LF + L P+ V YNI
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
I C G++ A + DME+ + T++ LI G N+ +++ L+ +MKEK +
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 554 MPDASIVSIVVDLLVKNE 571
P+ + + L + E
Sbjct: 626 SPNICTYNTAIQYLCEGE 643
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 253/547 (46%), Gaps = 58/547 (10%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLNATGLF-------------PNLYTYNILINCFCKIGR 111
P + +FN +++L K L+A+ +F PN TYN+++ FCK+G
Sbjct: 250 PDIVTFNSRISALCKEGKV---LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 112 VSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT 171
+ F I + + ++N ++GL + +EA + ++ G P++ +YN
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 172 LINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFL 231
L++GLC+ G A + M NG VC P+ VTY ++ G C G VD AK+L
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKR-NG----VC-PDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 232 QMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNR 291
+M N P+ T N L+H L +EA+ L +M ++G VT N+I+D LC +
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 292 KMDEASRLL-----------------------DLMVQRGVRPNACTYNTLMDGFCLMGKI 328
++D+A ++ D +++ P+ TY+TL++G C G+
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540
Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
A+ LF M + D V+YNI I+ +CK ++ A + ++M KG ++ TYN+L
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
LGL +Q+ L DEM+ G++ + TY T I LC+ + +A L +
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELF------CSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
++ ++ LI+ CK A E+F C G+ Y++M L GQ
Sbjct: 661 APNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-------YSLMFNELLAAGQ 713
Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
+ KA +L + + + L+ + +E + +LHKM ++ D + +
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMP 773
Query: 563 VVDLLVK 569
V+D L K
Sbjct: 774 VIDGLGK 780
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 197/431 (45%), Gaps = 26/431 (6%)
Query: 65 PPVSSFNILLASLAK------NKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P + S+NIL+ L K K + G+ P+ TY L++ +C +G+V
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
++R+ PNA T N L+ L RI EA L K+ G + +T N +++GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 179 TGHTMIALNLFEEMAN---------GNGEIGVV--------CKPNTVTYSTIIDGLCKEG 221
+G A+ + + M GN IG+V C P+ +TYST+++GLCK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
+AK LF +M E + PD V YN IH C + A R+ +M +G S+ T+N
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
++ L ++ E L+D M ++G+ PN CTYNT + C K+ A L M
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK-GIKPTVVTYNTLFLGLFEIHQVEH 400
+ S+ LI +CK + + A ++ VS G K + Y+ +F L Q+
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLK 716
Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
A +L + + G T Y ++ LCK + A + + D A +ID
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776
Query: 461 GLCKSGRLKFA 471
GL K G K A
Sbjct: 777 GLGKMGNKKEA 787
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 13/284 (4%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P + +++ LL L K + N L P+ YNI I+ FCK G++S F
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
+ + + T+NSLI GL +++I E L ++K G PN+ TYNT I LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
A NL +EM N PN ++ +I+ CK D A+ +F +
Sbjct: 642 GEKVEDATNLLDEMMQKN------IAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSIC 694
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
Y+ + + L A +A L ++D+G + + +++ LCK +++ AS
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
+L M+ RG + ++DG MG A M M
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMA 798
Score = 35.8 bits (81), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
P+V YN++++ + +++ L+ DM AP TF++LI + EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
+M EK P+ I+V K ++ K L
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 245 bits (625), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 270/534 (50%), Gaps = 17/534 (3%)
Query: 47 PNEAFCIFDYMLRMHPSPPPVSSFNILLA--------SLAKNKHYDTRLNATGLFPNLYT 98
P+ A IF M+R+ P ++ +L+ S++ + + G+ N+ T
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQT 206
Query: 99 YNILINCFCKIGRVSLGFIAFGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
+N+L+N +C G++ R++ P+ T+N+++K + + R+ + L +
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
K G PN +TYN L+ G C+ G A + E M N P+ TY+ +I+GL
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN------VLPDLCTYNILINGL 320
Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
C G + + L MK + PDVVTYN+LI G EA++L +M + GV+ +
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Query: 278 VTFNVIMDELCKNRKMDEASRLL-DLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
VT N+ + LCK K + +R + +L+ G P+ TY+TL+ + +G ++ A E+
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
M G K + ++ N +++ CK ++++EA +L +G VTY TL +G F
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
+VE AL+++DEM++ + T+ + I GLC +G A+E F L D +N
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 457 CLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEEN 516
+I G CK GR++ A+E + P+ T NI++ GLC +G +KA + F + E
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Query: 517 AAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
D +T++ +I F + + + +LL +M+EK + PD + + LL+++
Sbjct: 621 REV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED 673
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 249/498 (50%), Gaps = 35/498 (7%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNILLASLAKN------KHYDTRLNATGLFPNLYTYNIL 102
+A + + M+ P ++N +L +++K K + GL PN TYN L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
+ +CK+G + F + ++ P+ T+N LI GL + E L +K+
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
+P+V+TYNTLI+G G ++ A L E+M N GV K N VT++ + LCKE
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMEND----GV--KANQVTHNISLKWLCKE-- 393
Query: 223 VDKAKALFLQMKD----ENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVV 278
+K +A+ ++K+ +PD+VTY++LI D + A + EM +G++ + +
Sbjct: 394 -EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 279 TFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSM 338
T N I+D LCK RK+DEA LL+ +RG + TY TL+ GF K+ +A E++ M
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 339 ESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQV 398
+ + ++N LI G C + + E A+ + E+ G+ P T+N++ LG + +V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 399 EHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCL 458
E A + ++E + D T ++GLCK G +A+ F TL I + E+D YN +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTM 631
Query: 459 IDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKA------------ 506
I CK +LK A++L + L P+ TYN I L DG++ +
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Query: 507 ---RDLFLDMEENAAAPD 521
RDL ++ E+N A +
Sbjct: 692 SMKRDLQVETEKNPATSE 709
Score = 229 bits (583), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 256/500 (51%), Gaps = 13/500 (2%)
Query: 94 PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGL---HAESRIMEA 150
P+ ++I ++ + G+ + F +++R PN T N+L+ GL + I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
+F + G NV T+N L+NG C G AL + E M + E V P+ VTY
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS---EFKV--NPDNVTY 243
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
+TI+ + K+G + K L L MK + P+ VTYN+L++G C EA ++ +E+M
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI-VELMK 302
Query: 271 Q-GVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKIN 329
Q V P + T+N++++ LC M E L+D M ++P+ TYNTL+DG +G
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362
Query: 330 RAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS-KGIKPTVVTYNTL 388
A +L ME+ G K + V++NI + CK ++ E +E+V G P +VTY+TL
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
++ + AL++ EM + G+ +T T T +D LCK + EA L +
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARD 508
+D Y LI G + +++ A E++ + + P V T+N +I GLC+ G+ + A +
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 509 LFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLV 568
F ++ E+ PD TF+ +I G+ + K E ++ + PD +I+++ L
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 569 KNEISLKSLPSF--LVQERQ 586
K ++ K+L F L++ER+
Sbjct: 603 KEGMTEKALNFFNTLIEERE 622
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 94 PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
P + T+N LI C G+ L F + S P+ +TFNS+I G E R+ +A
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
+ + +P+ T N L+NGLC+ G T ALN F + + +TVTY+T+
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-------EVDTVTYNTM 631
Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM----- 268
I CK+ + +A L +M+++ + PD TYNS I L +E L +
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Query: 269 -MDQGVQ-----------------PSVVTFNVIMDELCKNRKMDEASR 298
M + +Q + ++ ++DELC ++ E SR
Sbjct: 692 SMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 239/443 (53%), Gaps = 16/443 (3%)
Query: 100 NILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
++L+ + R LGF AF R + +A + L+ L E+R + ++ ++
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
+PNV T+N +IN LC+TG A ++ E+M C PN V+Y+T+IDG CK
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG------CSPNVVSYNTLIDGYCK 270
Query: 220 ---EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPS 276
G + KA A+ +M + +++P++ T+N LI G ++ + ++F EM+DQ V+P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 277 VVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFG 336
V+++N +++ LC K+ EA + D MV GV+PN TYN L++GFC + A ++FG
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 337 SMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIH 396
S++ G YN+LI+ YCK ++++ +L EM +GI P V TYN L GL
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 397 QVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYN 456
+E A KLFD++ G+ D T+ ++G C+ G +A L + + + + YN
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 457 CLIDGLCKSGRLKFAWELFCSL-PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEE 515
++ G CK G LK A + + L NV +YN+++QG G+++ A L +M E
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 516 NAAAPDVITF-----DMLIHGFI 533
P+ IT+ +M+ GF+
Sbjct: 570 KGLVPNRITYEIVKEEMVDQGFV 592
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 191/339 (56%), Gaps = 5/339 (1%)
Query: 248 LIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRG 307
L+ L N + + ++ EM+ + +QP+V TFNV+++ LCK KM++A +++ M G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 308 VRPNACTYNTLMDGFCLMG---KINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVE 364
PN +YNTL+DG+C +G K+ +A+ + M + ++NILI+G+ K+ +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
++ +++EM+ + +KP V++YN+L GL ++ A+ + D+M GV + TY I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
+G CKN + EA+++F +++ + YN LID CK G++ + L + +V
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
P+V TYN +I GLC +G ++ A+ LF D + PD++TF +L+ G+ R E K L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYCRKGESRKAAML 492
Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQ 583
L +M + + P +IV+ K E +LK+ + Q
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCK-EGNLKAATNMRTQ 530
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 194/376 (51%), Gaps = 29/376 (7%)
Query: 32 FRDLTTREGDINVITPN---EAFCIFDYM---------LRMHPSPPPVSSFNILLASLAK 79
++++ R+ NV T N A C M ++++ P V S+N L+ K
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 80 ----NKHYDT-----RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPN 130
K Y + + PNL T+NILI+ F K + F +L PN
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 131 AATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFE 190
++NSLI GL +I EA ++ K+ + G +PN+ITYN LING C+ AL++F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 191 EMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
+ G G + P T Y+ +ID CK G +D AL +M+ E I PDV TYN LI
Sbjct: 391 SV-KGQGAV-----PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
GLC + AK+LF ++ +G+ P +VTF+++M+ C+ + +A+ LL M + G++P
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMES-MGCKHDDVSYNILINGYCKNKEVEEALSL 369
TYN +M G+C G + A + ME + + SYN+L+ GY + ++E+A L
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563
Query: 370 YREMVSKGIKPTVVTY 385
EM+ KG+ P +TY
Sbjct: 564 LNEMLEKGLVPNRITY 579
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 180/335 (53%), Gaps = 11/335 (3%)
Query: 203 CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAK 262
CKP ++ L KE + ++ +M I P+V T+N +I+ LC N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 263 RLFIEMMDQGVQPSVVTFNVIMDELCK---NRKMDEASRLLDLMVQRGVRPNACTYNTLM 319
+ +M G P+VV++N ++D CK N KM +A +L MV+ V PN T+N L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 320 DGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIK 379
DGF + + ++F M K + +SYN LING C ++ EA+S+ +MVS G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 380 PTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVEL 439
P ++TYN L G + ++ AL +F ++ G TR Y ID CK G I + L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 440 FRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCN 499
+ D+ YNCLI GLC++G ++ A +LF L L P++VT++I+++G C
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482
Query: 500 DGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIR 534
G+ KA L +M + P +T+++++ G+ +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 204/391 (52%), Gaps = 18/391 (4%)
Query: 53 IFDYMLRMHPSPPPVSSFNILLASLAK----NKHYDT--RLNATGLFPNLYTYNILINCF 106
++ M+R P V +FN+++ +L K NK D + G PN+ +YN LI+ +
Sbjct: 210 VYKEMIR-RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 107 CKIGRVSLGFIA---FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCE 163
CK+G + A ++ + +PN TFN LI G + + + +F ++ +
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFV 223
PNVI+YN+LINGLC G A+++ ++M + GV +PN +TY+ +I+G CK +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDML 382
Query: 224 DKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVI 283
+A +F +K + P YN LI C ++ L EM +G+ P V T+N +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 284 MDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC 343
+ LC+N ++ A +L D + +G+ P+ T++ LM+G+C G+ +A L M MG
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREM-VSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
K ++YNI++ GYCK ++ A ++ +M + ++ V +YN L G + ++E A
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
L +EM G+ + TY + + G++
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 135/279 (48%), Gaps = 8/279 (2%)
Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKH---DDVSYNILINGYCKNKEVEEALSLYREM 373
+ +DGF G ++ +F ++ SM C + + + ++L+ Y N E ++
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAI-SM-CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRS 179
Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
G K + ++ L + L + ++ ++ EM R + + T+ I+ LCK G +
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM 239
Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCK---SGRLKFAWELFCSLPHGVLVPNVVTY 490
+A ++ +++ C ++ +YN LIDG CK +G++ A + + + PN+ T+
Sbjct: 240 NKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF 299
Query: 491 NIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKE 550
NI+I G D + + +F +M + P+VI+++ LI+G + S+ + KM
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 551 KKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQGEV 589
V P+ + +++ KN++ ++L F + QG V
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/527 (28%), Positives = 259/527 (49%), Gaps = 44/527 (8%)
Query: 89 ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
A+GL P Y LI +C+ V G+ + + + T+ +++KG+ + +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
A + ++ A GC PNV+ Y TLI + A+ + +EM E G+ P+
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIF 488
Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
Y+++I GL K +D+A++ ++M + + P+ TY + I G A+++ A + EM
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
+ GV P+ V +++E CK K+ EA MV +G+ +A TY LM+G K+
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
+ AEE+F M G D SY +LING+ K +++A S++ EMV +G+ P V+ YN L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
G ++E A +L DEM G+ + TY T IDG CK+G + EA LF +++
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 449 ELDIQAYNCLIDGLCKSGRLKFAWELF---------CSLPHGVLV--------------- 484
D Y L+DG C+ ++ A +F + P L+
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 485 --------------PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIH 530
PN VTYNIMI LC +G ++ A++LF M+ P VIT+ L++
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 531 GFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSL 577
G+ ++ +++ + + + PD + S++++ +K ++ K+L
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 238/483 (49%), Gaps = 21/483 (4%)
Query: 89 ATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIM 148
A+G PN+ Y LI F + R + P+ +NSLI GL R+
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 149 EAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTV 208
EA + ++ G +PN TY I+G A +EM E GV+ PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558
Query: 209 TYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEM 268
+ +I+ CK+G V +A + + M D+ I D TY L++GL + ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 269 MDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKI 328
+G+ P V ++ V+++ K M +AS + D MV+ G+ PN YN L+ GFC G+I
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 329 NRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTL 388
+A+EL M G + V+Y +I+GYCK+ ++ EA L+ EM KG+ P Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 389 FLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKC 448
G ++ VE A+ +F + G A+ T + I+ + K G E+ R++
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLN--RLMDG 795
Query: 449 ELDI------QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
D YN +ID LCK G L+ A ELF + + L+P V+TY ++ G +
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY---DK 852
Query: 503 MDKARDLFLDMEENAAA---PDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASI 559
M + ++F +E AA PD I + ++I+ F++ +K L+ +M K + D
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 560 VSI 562
+SI
Sbjct: 913 LSI 915
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 245/514 (47%), Gaps = 23/514 (4%)
Query: 69 SFNILLASLAKNKHYDTRLNATGLFPNLYTYNILIN------CFC---KIGRVSLGFIAF 119
++++L+ L K ++ D A GL + ++ I I C C K G + F
Sbjct: 314 TYSLLIDGLLKGRNADA---AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 120 GRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRT 179
++ S P A + SLI+G E + + L ++K + TY T++ G+C +
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 180 GHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENIN 239
G A N+ +EM I C+PN V Y+T+I + A + +MK++ I
Sbjct: 431 GDLDGAYNIVKEM------IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 240 PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRL 299
PD+ YNSLI GL A +EA+ +EM++ G++P+ T+ + + + A +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 300 LDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCK 359
+ M + GV PN L++ +C GK+ A + SM G D +Y +L+NG K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 360 NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRT 419
N +V++A ++REM KGI P V +Y L G ++ ++ A +FDEM +G+ +
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 420 YTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLP 479
Y + G C++G I +A EL + + + Y +IDG CKSG L A+ LF +
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 480 HGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPS 539
LVP+ Y ++ G C +++A +F + A F+ LI+ + +
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 540 KVNELLHKMKEKKV----MPDASIVSIVVDLLVK 569
E+L+++ + P+ +I++D L K
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 239/535 (44%), Gaps = 47/535 (8%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLNATGLFPNLY-------------TYNILINCFCKIGR 111
P +S +LL +L R N LF ++Y TY++LI C+ G
Sbjct: 184 PRLSRCKVLLDAL-------LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN 236
Query: 112 VSLG---FIAFGRILRSC------------------FTPNAATFNSLIKGLHAESRIMEA 150
V LG + R+ P T++ LI GL R+ +A
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
+L ++ + G + TY+ LI+GL + + A L EM + G+ KP Y
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH----GINIKP--YMY 350
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
I + KEG ++KAKALF M + P Y SLI G C + + L +EM
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
+ + S T+ ++ +C + +D A ++ M+ G RPN Y TL+ F +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
A + M+ G D YN LI G K K ++EA S EMV G+KP TY
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
G E + A K EM+ GV + T I+ CK G +IEA +R++
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
D + Y L++GL K+ ++ A E+F + + P+V +Y ++I G G M KA +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVD 565
+M E P+VI ++ML+ GF R E K ELL +M K + P+A ++D
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 218/485 (44%), Gaps = 59/485 (12%)
Query: 65 PPVSSFNILLASLAKNKHYD------TRLNATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P + +N L+ L+K K D + GL PN +TY I+ + + +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DK 543
Query: 119 FGRILRSC-FTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLC 177
+ + +R C PN LI + +++EA + + + G + TY L+NGL
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 178 RTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDEN 237
+ A +F EM G G P+ +Y +I+G K G + KA ++F +M +E
Sbjct: 604 KNDKVDDAEEIFREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 238 INPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEAS 297
+ P+V+ YN L+ G C + + +AK L EM +G+ P+ VT+ I+D CK+ + EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 298 RLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGC-------------- 343
RL D M +G+ P++ Y TL+DG C + + RA +FG+ + GC
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776
Query: 344 -------------------------KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGI 378
K +DV+YNI+I+ CK +E A L+ +M + +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 379 KPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVE 438
PTV+TY +L G ++ + +FDE G+ D Y+ I+ K G +A+
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 439 LFRTLRILK-----CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
L + C+L I L+ G K G ++ A ++ ++ +P+ T +
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956
Query: 494 IQGLC 498
I C
Sbjct: 957 INESC 961
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 195/468 (41%), Gaps = 33/468 (7%)
Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALN 187
+ + F L G A+ I EA +F+ P + L++ L R L+
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203
Query: 188 LFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDE------NIN-- 239
LF ++ G E VV + TY +I C+ G V K + + + E N++
Sbjct: 204 LFWDVYKGMVERNVVF--DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 240 -------------PDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDE 286
P TY+ LI GLC +AK L +EM GV T+++++D
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 287 LCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK---INRAEELFGSMESMGC 343
L K R D A L+ MV G+ Y+ + C+M K + +A+ LF M + G
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI---CVMSKEGVMEKAKALFDGMIASGL 378
Query: 344 KHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALK 403
+Y LI GYC+ K V + L EM + I + TY T+ G+ ++ A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 404 LFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLC 463
+ EM G + YTT I +N +A+ + + ++ DI YN LI GL
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 464 KSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVI 523
K+ R+ A + L PN TY I G + A +M E P+ +
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 524 TFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
LI+ + + + + M ++ ++ DA +++++ L KN+
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 212/499 (42%), Gaps = 69/499 (13%)
Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKP-------------NTVT 209
E + +++ L LC G AL++ E M N + V + V
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153
Query: 210 YSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMM 269
+ + DG +G++++A +F + P + L+ L N + ++ M+
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213
Query: 270 DQGVQPSVVTFNVIM-------------DELCKNRK--------MDEASRLLDLMVQRGV 308
++ V V T+++++ D L K K +D A +L + M+ +G+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273
Query: 309 RPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALS 368
P TY+ L+DG C + ++ A+ L M+S+G D+ +Y++LI+G K + + A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 369 LYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
L EMVS GI Y+ + + +E A LFD M G+ + Y + I+G C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 429 KNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVV 488
+ + + EL ++ + Y ++ G+C SG L A+ + + PNVV
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 489 TYNIMIQ-----------------------------------GLCNDGQMDKARDLFLDM 513
Y +I+ GL +MD+AR ++M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 514 EENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEIS 573
EN P+ T+ I G+I +E + ++ + +M+E V+P+ + + +++ K
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 574 LKSLPSFLVQERQGEVGES 592
+++ ++ QG +G++
Sbjct: 574 IEACSAYRSMVDQGILGDA 592
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 158/330 (47%), Gaps = 17/330 (5%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLAS------LAKNKHYDTRLNATGLFPNLYTYNI 101
+A IFD M+ P V +N+LL + K K ++ GL PN TY
Sbjct: 644 QKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
+I+ +CK G ++ F F + P++ + +L+ G + + A +F K G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-G 761
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
C + +N LIN + + G T + + + +G+ KPN VTY+ +ID LCKEG
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--FDRFGKPNDVTYNIMIDYLCKEG 819
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
++ AK LF QM++ N+ P V+TY SL++G E +F E + G++P + ++
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNAC-----TYNTLMDGFCLMGKINRAEELFG 336
VI++ K +A L+D M + + C T L+ GF +G++ AE++
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Query: 337 SMESMGCKHDDVSYNILINGYC--KNKEVE 364
+M + D + LIN C N+ VE
Sbjct: 940 NMVRLQYIPDSATVIELINESCISSNQRVE 969
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 130/292 (44%), Gaps = 38/292 (13%)
Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
+W +++++ + +D +F+ + +LC ++A +++ M++R P A ++
Sbjct: 85 NWVDSQKVTEQKLD--------SFSFLALDLCNFGSFEKALSVVERMIERN-WPVAEVWS 135
Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
+++ C S E +G D V + IL +GY +EEA+ ++ +
Sbjct: 136 SIVR--C-------------SQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGL 180
Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
+ P + L L ++++ ++ M V D +TY I C+ G
Sbjct: 181 ELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG----N 236
Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
V+L + + + K E + + +D G LK + C LVP TY+++I G
Sbjct: 237 VQLGKDV-LFKTEKEFRTATLNVD-----GALKLKESMICK----GLVPLKYTYDVLIDG 286
Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKM 548
LC +++ A+ L ++M+ + D T+ +LI G ++ L+H+M
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 262/513 (51%), Gaps = 13/513 (2%)
Query: 65 PPVSSFNILLASLAKNKHYDTRLN------ATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V F L+ AK D+ L+ ++ L ++ YN+ I+ F K+G+V + +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
F I + P+ T+ S+I L +R+ EA +F L+ P YNT+I G
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
G A +L E G I P+ + Y+ I+ L K G VD+A +F +MK ++
Sbjct: 321 AGKFDEAYSLLERQ-RAKGSI-----PSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDA 373
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
P++ TYN LI LC A + A L M G+ P+V T N+++D LCK++K+DEA
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
+ + M + P+ T+ +L+DG +G+++ A +++ M C+ + + Y LI +
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 359 KNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTR 418
+ E+ +Y++M+++ P + NT +F+ + E +F+E++ D R
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 419 TYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSL 478
+Y+ I GL K G+ E ELF +++ C LD +AYN +IDG CK G++ A++L +
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 479 PHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEP 538
P VVTY +I GL ++D+A LF + + +V+ + LI GF ++
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 539 SKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
+ +L ++ +K + P+ + ++D LVK E
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/546 (27%), Positives = 267/546 (48%), Gaps = 14/546 (2%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
+EA +F++ L + P ++N ++ +D R A G P++ YN
Sbjct: 290 DEAVEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
++ C K+G+V F + + PN +T+N LI L ++ A L ++ G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
PNV T N +++ LC++ A +FEEM VC P+ +T+ ++IDGL K G
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK------VCTPDEITFCSLIDGLGKVG 461
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
VD A ++ +M D + + + Y SLI + + +++ +M++Q P + N
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
MD + K + ++ + + + R P+A +Y+ L+ G G N ELF SM+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHA 401
GC D +YNI+I+G+CK +V +A L EM +KG +PTVVTY ++ GL +I +++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 402 LKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDG 461
LF+E + + + Y++ IDG K G I EA + L ++ +N L+D
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 462 LCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPD 521
L K+ + A F S+ PN VTY I+I GLC + +KA + +M++ P
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 522 VITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFL 581
I++ +I G + ++ L + K +PD++ + +++ L ++ + F
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 582 VQERQG 587
R+G
Sbjct: 822 ETRRRG 827
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 261/529 (49%), Gaps = 12/529 (2%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNA-----TGLFPNLYTYNIL 102
+EA+ + + R S P V ++N +L L K D L PNL TYNIL
Sbjct: 325 DEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNIL 383
Query: 103 INCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGC 162
I+ C+ G++ F + ++ PN T N ++ L ++ EA A+F ++ C
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 163 EPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGF 222
P+ IT+ +LI+GL + G A ++E+M + + C+ N++ Y+++I G
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD------CRTNSIVYTSLIKNFFNHGR 497
Query: 223 VDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNV 282
+ ++ M ++N +PD+ N+ + + A + + + +F E+ + P ++++
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 283 IMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMG 342
++ L K +E L M ++G + YN ++DGFC GK+N+A +L M++ G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 343 CKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHAL 402
+ V+Y +I+G K ++EA L+ E SK I+ VV Y++L G ++ +++ A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 403 KLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGL 462
+ +E+ + G+ + T+ + +D L K I EA+ F++++ LKC + Y LI+GL
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 463 CKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDV 522
CK + A+ + + + P+ ++Y MI GL G + +A LF + N PD
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 523 ITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
++ +I G N L + + + + +++D L KN+
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 239/477 (50%), Gaps = 9/477 (1%)
Query: 94 PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
P Y LI F + + F ++ + P F +LI+G E R+ A +L
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEM-ANGNGEIGVVCKPNTVTYST 212
++K+ + +++ YN I+ + G +A F E+ ANG KP+ VTY++
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG-------LKPDEVTYTS 278
Query: 213 IIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQG 272
+I LCK +D+A +F ++ P YN++I G A ++EA L +G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 273 VQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAE 332
PSV+ +N I+ L K K+DEA ++ + M ++ PN TYN L+D C GK++ A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 333 ELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGL 392
EL SM+ G + + NI+++ CK+++++EA +++ EM K P +T+ +L GL
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 393 FEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDI 452
++ +V+ A K++++M ++ YT+ I +G + ++++ + C D+
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 453 QAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLD 512
Q N +D + K+G + +F + VP+ +Y+I+I GL G ++ +LF
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 513 MEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
M+E D ++++I GF + + +K +LL +MK K P V+D L K
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 244/524 (46%), Gaps = 13/524 (2%)
Query: 70 FNILLASLAKNKHYDT------RLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRIL 123
+N+ + S K D + A GL P+ TY +I CK R+ F +
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 124 RSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTM 183
++ P +N++I G + + EA +L + +A G P+VI YN ++ L + G
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 184 IALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVV 243
AL +FEEM PN TY+ +ID LC+ G +D A L M+ + P+V
Sbjct: 361 EALKVFEEMKKD-------AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
T N ++ LC + +EA +F EM + P +TF ++D L K ++D+A ++ + M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
+ R N+ Y +L+ F G+ +++ M + C D N ++ K E
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
E+ +++ E+ ++ P +Y+ L GL + +LF M+ G DTR Y
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
IDG CK G + +A +L ++ E + Y +IDGL K RL A+ LF +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
NVV Y+ +I G G++D+A + ++ + P++ T++ L+ ++ E ++
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSFLVQERQG 587
MKE K P+ I+++ L K K+ + ++QG
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 169/351 (48%), Gaps = 6/351 (1%)
Query: 94 PNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAAL 153
P+L N ++C K G G F I F P+A +++ LI GL E L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 154 FTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTI 213
F +K GC + YN +I+G C+ G A L EEM E P VTY ++
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE------PTVVTYGSV 628
Query: 214 IDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGV 273
IDGL K +D+A LF + K + I +VV Y+SLI G +EA + E+M +G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 274 QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEE 333
P++ T+N ++D L K +++EA M + PN TY L++G C + K N+A
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 334 LFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLF 393
+ M+ G K +SY +I+G K + EA +L+ + G P YN + GL
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 394 EIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
++ A LF+E +R G+ +T +D L KN + +A + LR
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 6/375 (1%)
Query: 197 GEIGVVC-KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
GE+ V P+ T ++ G K + + + M+ P Y +LI
Sbjct: 122 GEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181
Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
N + LF +M + G +P+V F ++ K ++D A LLD M + + Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241
Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
N +D F +GK++ A + F +E+ G K D+V+Y +I CK ++EA+ ++ +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
P YNT+ +G + + A L + + G Y + L K G + E
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
A+++F ++ ++ YN LID LC++G+L A+EL S+ L PNV T NIM+
Sbjct: 362 ALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 496 GLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
LC ++D+A +F +M+ PD ITF LI G ++ +V++ +K+ EK +
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV---GRVDD-AYKVYEKMLDS 476
Query: 556 DASIVSIVVDLLVKN 570
D SIV L+KN
Sbjct: 477 DCRTNSIVYTSLIKN 491
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 36/326 (11%)
Query: 244 TYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLM 303
+YNSL+ + +++ ++ EM G PSV T ++ K K+ E ++ +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 304 VQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEV 363
+ RP Y TL+ F H D+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFS------------------AVNHSDM--------------- 186
Query: 364 EEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTF 423
L+L+++M G +PTV + TL G + +V+ AL L DEM+ + AD Y
Sbjct: 187 --MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 424 IDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVL 483
ID K G + A + F + + D Y +I LCK+ RL A E+F L
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 484 VPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNE 543
VP YN MI G + G+ D+A L + P VI ++ ++ ++ + + +
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 544 LLHKMKEKKVMPDASIVSIVVDLLVK 569
+ +MK K P+ S +I++D+L +
Sbjct: 365 VFEEMK-KDAAPNLSTYNILIDMLCR 389
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 5/231 (2%)
Query: 328 INRAEELFGSMESMG-CKHDDVSYN--ILINGYCKNKEVEEALSLYREMVSKGIKPTVVT 384
+NRA E F E H SYN +L+ C+N + + + EM G P+V T
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALD--QILGEMSVAGFGPSVNT 135
Query: 385 YNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLR 444
+ LG + +++ + M++ YTT I + + LF+ ++
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 445 ILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMD 504
L E + + LI G K GR+ A L + L ++V YN+ I G++D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 505 KARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMP 555
A F ++E N PD +T+ +I + N + E+ +++ + +P
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 260/534 (48%), Gaps = 22/534 (4%)
Query: 49 EAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDTRLNATGL-----FP------NLY 97
EA +F+ ML + V S N+ L L+K D AT + FP N+
Sbjct: 193 EARRVFEKMLN-YGLVLSVDSCNVYLTRLSK----DCYKTATAIIVFREFPEVGVCWNVA 247
Query: 98 TYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKL 157
+YNI+I+ C++GR+ + +TP+ ++++++ G + + L +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 158 KAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGL 217
K G +PN Y ++I LCR A F EM G++ P+TV Y+T+IDG
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGF 361
Query: 218 CKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
CK G + A F +M +I PDV+TY ++I G C D EA +LF EM +G++P
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
VTF +++ CK M +A R+ + M+Q G PN TY TL+DG C G ++ A EL
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
M +G + + +YN ++NG CK+ +EEA+ L E + G+ VTY TL + +
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
++ A ++ EM G+ T+ ++G C +G + + +L + + +N
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
L+ C LK A ++ + + P+ TY +++G C M +A LF +M+
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNE 571
+ V T+ +LI GF++ + + E+ +M+ + + D I D K +
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 241/500 (48%), Gaps = 10/500 (2%)
Query: 95 NLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALF 154
N+Y + +C+ + + I F N A++N +I + RI EA L
Sbjct: 214 NVYLTRLSKDCY----KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 155 TKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTII 214
++ G P+VI+Y+T++NG CR G L E M KPN+ Y +II
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG------LKPNSYIYGSII 323
Query: 215 DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQ 274
LC+ + +A+ F +M + I PD V Y +LI G C D A + F EM + +
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 275 PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEEL 334
P V+T+ I+ C+ M EA +L M +G+ P++ T+ L++G+C G + A +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 335 FGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE 394
M GC + V+Y LI+G CK +++ A L EM G++P + TYN++ GL +
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 395 IHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQA 454
+E A+KL E + G+ ADT TYTT +D CK+G + +A E+ + + + I
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 455 YNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDME 514
+N L++G C G L+ +L + + PN T+N +++ C + A ++ DM
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 515 ENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISL 574
PD T++ L+ G + + L +MK K S S+++ +K + L
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 575 KSLPSFLVQERQGEVGESNV 594
++ F R+G + +
Sbjct: 684 EAREVFDQMRREGLAADKEI 703
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 203/394 (51%), Gaps = 6/394 (1%)
Query: 74 LASLAKNKHYDTRLNATGLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAAT 133
+ LA+ + + + G+ P+ Y LI+ FCK G + F + TP+ T
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 134 FNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMA 193
+ ++I G ++EA LF ++ G EP+ +T+ LING C+ GH A + M
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM- 447
Query: 194 NGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLC 253
I C PN VTY+T+IDGLCKEG +D A L +M + P++ TYNS+++GLC
Sbjct: 448 -----IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 254 HANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNAC 313
+ + EA +L E G+ VT+ +MD CK+ +MD+A +L M+ +G++P
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 314 TYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
T+N LM+GFCL G + E+L M + G + ++N L+ YC ++ A ++Y++M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
S+G+ P TY L G + ++ A LF EM+ G + TY+ I G K
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGR 467
+EA E+F +R D + ++ D K R
Sbjct: 683 LEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 36/293 (12%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYDT------RLNATGLFPNLYTYNI 101
+AF + ++M++ SP V ++ L+ L K D+ + GL PN++TYN
Sbjct: 438 KDAFRVHNHMIQAGCSPN-VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
++N CK G + G + + T+ +L+ + +A + ++ G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 162 CEPNVITYNTLINGLCRTG---------HTMIALNLFEEMANGNGEIGVVC--------- 203
+P ++T+N L+NG C G + M+A + N + C
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 204 -----------KPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGL 252
P+ TY ++ G CK + +A LF +MK + + V TY+ LI G
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 253 CHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQ 305
+ EA+ +F +M +G+ F+ D K ++ D +D +++
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 246/466 (52%), Gaps = 6/466 (1%)
Query: 91 GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
G+ ++ ++ I+ + K G ++ + + R+L +PN T+ LIKGL + RI EA
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTY 210
++ ++ G EP+++TY++LI+G C+ G+ L+E+M I + P+ V Y
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM------IKMGYPPDVVIY 464
Query: 211 STIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMD 270
++DGL K+G + A ++M ++I +VV +NSLI G C N ++EA ++F M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 271 QGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
G++P V TF +M +++EA L M + G+ P+A Y TL+D FC K
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
+LF M+ D N++I+ K +E+A + ++ ++P +VTYNT+
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
G + +++ A ++F+ ++ +T T T I LCKN + A+ +F + +
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
+ Y CL+D KS ++ +++LF + + P++V+Y+I+I GLC G++D+A ++F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
+ PDV+ + +LI G+ ++ + L M V PD
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/566 (28%), Positives = 269/566 (47%), Gaps = 52/566 (9%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNK------HYDTRLNATGLFPNLYTYN- 100
++A IF Y ++ P S + +L + + ++ H+D +L G+ P+ + +
Sbjct: 163 DKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFD-KLCRGGIEPSGVSAHG 221
Query: 101 -ILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
+L FCK G V+ ++ F + N ++KGL + +I A+ L + +
Sbjct: 222 FVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLD 279
Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCK 219
G PNV+T+ TLING C+ G A +LF+ M E P+ + YST+IDG K
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE------PDLIAYSTLIDGYFK 333
Query: 220 EGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVT 279
G + LF Q + + DVV ++S I + D A ++ M+ QG+ P+VVT
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 280 FNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSME 339
+ +++ LC++ ++ EA + +++RG+ P+ TY++L+DGFC G + L+ M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 340 SMGCKHDDVSY-----------------------------------NILINGYCKNKEVE 364
MG D V Y N LI+G+C+ +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 365 EALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFI 424
EAL ++R M GIKP V T+ T+ ++E AL LF M + G+ D Y T I
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 425 DGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLV 484
D CK+ ++LF ++ K DI N +I L K R++ A + F +L G +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 485 PNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNEL 544
P++VTYN MI G C+ ++D+A +F ++ P+ +T +LIH + N+ +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 545 LHKMKEKKVMPDASIVSIVVDLLVKN 570
M EK P+A ++D K+
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKS 719
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 235/482 (48%), Gaps = 12/482 (2%)
Query: 91 GLFPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEA 150
G PN+ T+ LIN FCK G + F F + + P+ +++LI G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 151 AALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCK---PNT 207
LF++ G + +V+ +++ I+ ++G A +++ M +C+ PN
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM---------LCQGISPNV 391
Query: 208 VTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIE 267
VTY+ +I GLC++G + +A ++ Q+ + P +VTY+SLI G C + L+ +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 268 MMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGK 327
M+ G P VV + V++D L K M A R M+ + +R N +N+L+DG+C + +
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 328 INRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNT 387
+ A ++F M G K D ++ ++ +EEAL L+ M G++P + Y T
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 388 LFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILK 447
L + + L+LFD MQR+ ++AD I L K I +A + F L K
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 448 CELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKAR 507
E DI YN +I G C RL A +F L PN VT I+I LC + MD A
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 508 DLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLL 567
+F M E + P+ +T+ L+ F + + +L +M+EK + P SI++D L
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Query: 568 VK 569
K
Sbjct: 752 CK 753
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 223/469 (47%), Gaps = 8/469 (1%)
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
L+ C C+ G V F + + ++ L R+ A F KL G
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 162 CEPN-VITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKE 220
EP+ V + +++ L G AL+ + +G+V + + ++ GL +
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV------SCNKVLKGLSVD 265
Query: 221 GFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTF 280
++ A L + D P+VVT+ +LI+G C + + A LF M +G++P ++ +
Sbjct: 266 Q-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 281 NVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMES 340
+ ++D K + +L + +GV+ + +++ +D + G + A ++ M
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
G + V+Y ILI G C++ + EA +Y +++ +G++P++VTY++L G + +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
L+++M + G D Y +DGL K G ++ A+ + L++ +N LID
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
G C+ R A ++F + + P+V T+ +++ +G++++A LF M + P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVK 569
D + + LI F + +P+ +L M+ K+ D ++ ++V+ LL K
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 215/467 (46%), Gaps = 48/467 (10%)
Query: 141 LHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGE-- 198
L ES A F + G +P ++ T+ + L R G +A +F+EM G+
Sbjct: 77 LSLESEPNSALKYFRWAEISGKDP---SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDF 133
Query: 199 --IGVVCKPNTVTYST---IIDGLCKEGFVDKAKALFL---------------QMKDENI 238
+G + + ++ +++ C+ G VDKA +F+ +M + I
Sbjct: 134 NVLGSI-RDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192
Query: 239 NPD---------------------VVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSV 277
D V + ++ L + +A +M++G + +
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252
Query: 278 VTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGS 337
V+ N ++ L + +++ ASRLL L++ G PN T+ TL++GFC G+++RA +LF
Sbjct: 253 VSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 338 MESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQ 397
ME G + D ++Y+ LI+GY K + L+ + + KG+K VV +++ +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 398 VEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNC 457
+ A ++ M G++ + TYT I GLC++G I EA ++ + E I Y+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 458 LIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENA 517
LIDG CK G L+ + L+ + P+VV Y +++ GL G M A + M +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 518 AAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVV 564
+V+ F+ LI G+ R+N + ++ M + PD + + V+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 168/340 (49%), Gaps = 30/340 (8%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFN-ILLASLAKNKHYDT-----RLNATGLFPNLYTYNI 101
+EA +F M ++ P V++F ++ S+ + + + R+ GL P+ Y
Sbjct: 513 DEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 102 LINCFCKIGRVSLGFIAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFG 161
LI+ FCK + ++G F + R+ + + A N +I L RI +A+ F L
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 162 CEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEG 221
EP+++TYNT+I G C A +FE + PNTVT + +I LCK
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKV------TPFGPNTVTLTILIHVLCKNN 685
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
+D A +F M ++ P+ VTY L+ + D + +LF EM ++G+ PS+V+++
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESM 341
+I+D LCK ++DEA+ + + + P+ Y L+ G+C +G++ A L+ M
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Query: 342 GCKHDDVSYNILINGYCKNKEVEEALSLY---REMVSKGI 378
G K DD+ ++ ALS Y + ++SKG+
Sbjct: 806 GVKPDDL--------------LQRALSEYNPPKWLMSKGV 831
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 177/384 (46%), Gaps = 18/384 (4%)
Query: 209 TYSTIIDGLCKEGFVDKAKALFLQM--------------KDENINPDVVTYNSLIHGLCH 254
++ TI L + G D A +F +M +D +++ DV + L+ C
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCR 158
Query: 255 ANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACT 314
++A +F+ GV + +++ L + ++D + D + + G+ P+ +
Sbjct: 159 YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218
Query: 315 -YNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREM 373
+ ++D G++ +A + + G + VS N ++ G + ++E A L +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277
Query: 374 VSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYI 433
+ G P VVT+ TL G + +++ A LF M++ G+ D Y+T IDG K G +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 434 IEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIM 493
+LF +LD+ ++ ID KSG L A ++ + + PNVVTY I+
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 494 IQGLCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKV 553
I+GLC DG++ +A ++ + + P ++T+ LI GF + L M +
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 554 MPDASIVSIVVDLLVKNEISLKSL 577
PD I ++VD L K + L ++
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAM 481
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 265/554 (47%), Gaps = 54/554 (9%)
Query: 48 NEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKH-------YDTRLNATGLFPNLYTYN 100
++A I+DY++ ++ S P V + N LL+ L K++ YD + N Y+
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN-YSTC 209
Query: 101 ILINCFCKIGRVSLGF-IAFGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKA 159
IL+ C G+V +G + GR + C PN +N++I G I A +F +LK
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKL 268
Query: 160 FGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVV----------------- 202
G P + T+ T+ING C+ G + + L E+ + V
Sbjct: 269 KGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVD 328
Query: 203 ------------CKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIH 250
CKP+ TY+ +I+ LCKEG + A + + + P+ ++Y LI
Sbjct: 329 PAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQ 388
Query: 251 GLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRP 310
C + +++ A +L ++M ++G +P +VT+ +++ L + MD+A + ++ RGV P
Sbjct: 389 AYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448
Query: 311 NACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLY 370
+A YN LM G C G+ A+ LF M D Y LI+G+ ++ + +EA ++
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Query: 371 REMVSKGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKN 430
V KG+K VV +N + G ++ AL + M + + D TY+T IDG K
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
Query: 431 GYIIEAVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTY 490
+ A+++FR + KC+ ++ Y LI+G C G K A E F + LVPNVVTY
Sbjct: 569 QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628
Query: 491 NIMIQGLCNDGQ-MDKARDLFLDMEENAAAPDVITFDMLIHGFIR------INEPSKVN- 542
+I+ L + ++KA + M N P+ +TF+ L+ GF++ + EP N
Sbjct: 629 TTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNH 688
Query: 543 -------ELLHKMK 549
E H+MK
Sbjct: 689 GQSSLFSEFFHRMK 702
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 228/485 (47%), Gaps = 45/485 (9%)
Query: 128 TPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNT--LINGLCRTGHTMIA 185
P+ NSL+ L R+ +A ++ ++ G +V Y+T L+ G+C G +
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG--DSVDNYSTCILVKGMCNEGKVEVG 224
Query: 186 LNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTY 245
L E G G C PN V Y+TII G CK G ++ A +F ++K + P + T+
Sbjct: 225 RKLIE------GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 246 NSLIHGLCHANDWNEAKRLFIEMMDQGV-------------------------------- 273
++I+G C D+ + RL E+ ++G+
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 274 ---QPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMGKINR 330
+P V T+N++++ LCK K + A LD ++G+ PN +Y L+ +C + +
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 331 AEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFL 390
A +L M GCK D V+Y ILI+G + +++A+++ +++ +G+ P YN L
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 391 GLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCEL 450
GL + + A LF EM + D Y T IDG ++G EA ++F ++
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 451 DIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLF 510
D+ +N +I G C+SG L A + LVP+ TY+ +I G M A +F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 511 LDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKN 570
ME+N P+V+T+ LI+GF + E +M+ + ++P+ + ++ L K
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 571 EISLK 575
+L+
Sbjct: 639 SSTLE 643
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 202/425 (47%), Gaps = 12/425 (2%)
Query: 164 PNVITYNTLINGLCRTGHTMIALNLFEEMANGNGEIGVVCKPNTVTYST--IIDGLCKEG 221
P+VI N+L++ L ++ A +++EM + + YST ++ G+C EG
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVD--------NYSTCILVKGMCNEG 219
Query: 222 FVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFN 281
V+ + L + P++V YN++I G C D A +F E+ +G P++ TF
Sbjct: 220 KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279
Query: 282 VIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGFCLMG-KINRAEELFGSMES 340
+++ CK + RLL + +RG+R + N ++D G K++ AE + G + +
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIA 338
Query: 341 MGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFEIHQVEH 400
CK D +YNILIN CK + E A+ E KG+ P ++Y L + + +
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 401 ALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRTLRILKCELDIQAYNCLID 460
A KL +M G D TY I GL +G++ +AV + L D YN L+
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 461 GLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQMDKARDLFLDMEENAAAP 520
GLCK+GR A LF + ++P+ Y +I G G D+AR +F E
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 521 DVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSIVVDLLVKNEISLKSLPSF 580
DV+ + +I GF R + +++M E+ ++PD S ++D VK + ++ F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 581 LVQER 585
E+
Sbjct: 579 RYMEK 583
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 179/423 (42%), Gaps = 62/423 (14%)
Query: 65 PPVSSFNILLASLAKNKHYDTRL------NATGLFPNLYTYNILINCFCKIGRVSLGFIA 118
P V+++NIL+ L K + + + GL PN +Y LI +CK +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 119 FGRILRSCFTPNAATFNSLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCR 178
++ P+ T+ LI GL + +A + KL G P+ YN L++GLC+
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 179 TGHTMIALNLFEEMANGNGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENI 238
TG + A LF EM + N P+ Y+T+IDG + G D+A+ +F ++ +
Sbjct: 463 TGRFLPAKLLFSEMLDRN------ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 239 NPDVVTYNSLIHGLCHANDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASR 298
DVV +N++I G C + +EA M ++ + P T++ I+D K + M A +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 299 LLDLMVQRGVRPNACTYNTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYC 358
+ M + +PN TY +L++GFC G AEE F M+ + V+Y LI
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 359 K-NKEVEEALSLYREMVSKGIKPTVVTYNTLFLGLFE----------------------- 394
K + +E+A+ + M++ P VT+N L G +
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696
Query: 395 -------------------------IH-QVEHALKLFDEMQRDGVAADTRTYTTFIDGLC 428
+H V+ A D+M + G + D ++ + G C
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Query: 429 KNG 431
G
Sbjct: 757 VVG 759
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 264/509 (51%), Gaps = 57/509 (11%)
Query: 25 FSSLLVHFRDLTTREGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLASLAKNKHYD 84
FS + +R++ R G ++ I ++AF +F M +P P V FN +L ++AK + YD
Sbjct: 46 FSGTTIDYREVL-RSG-LHNIKFDDAFHLFVLMAYSYPLPSIVE-FNKVLTAIAKMQMYD 102
Query: 85 TRLN-------ATGL--FPNLYTYNILINCFCKIGRVSLGFIAFGRILRSCFTPNAATFN 135
+N A G+ P+LYT NIL+NCFC+ CF P++A
Sbjct: 103 VVINLWKRIENAEGIEISPDLYTCNILVNCFCR-----------------CFQPSSAL-- 143
Query: 136 SLIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANG 195
+ K+ G EP+++T ++L+NG C + A+ + +M
Sbjct: 144 ----------------SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME-- 185
Query: 196 NGEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHA 255
++G+ K + V + +ID LCK V A + +MKD I+P+VVTY+SLI GLC +
Sbjct: 186 --KMGI--KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKS 241
Query: 256 NDWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTY 315
+A+R EM + + P+V+TF+ ++D K K+ + + +M+Q + PN TY
Sbjct: 242 GRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 301
Query: 316 NTLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVS 375
++L+ G C+ +++ A ++ M S GC + V+Y+ L NG+ K+ V++ + L +M
Sbjct: 302 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 361
Query: 376 KGIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIE 435
+G+ V+ NTL G F+ +++ AL +F M +G+ + R+Y + GL NG + +
Sbjct: 362 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 421
Query: 436 AVELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQ 495
A+ F ++ + +LDI Y +I G+CK+ +K A++LF L + P+ Y IMI
Sbjct: 422 ALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 481
Query: 496 GLCNDGQMDKARDL--FLD--MEENAAAP 520
L G +A L F + +N +AP
Sbjct: 482 ELNRAGMRTEADALNRFYQKHVRQNESAP 510
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 224/428 (52%), Gaps = 4/428 (0%)
Query: 137 LIKGLHAESRIMEAAALFTKLKAFGCEPNVITYNTLINGLCRTGHTMIALNLFEEMANGN 196
L GLH + +A LF + P+++ +N ++ + + + +NL++ + N
Sbjct: 57 LRSGLH-NIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAE 115
Query: 197 GEIGVVCKPNTVTYSTIIDGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHAN 256
G + P+ T + +++ C+ A + +M I PD+VT +SL++G C +N
Sbjct: 116 G---IEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSN 172
Query: 257 DWNEAKRLFIEMMDQGVQPSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYN 316
+A + +M G++ VV +++D LCKNR + A +L M RG+ PN TY+
Sbjct: 173 SIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYS 232
Query: 317 TLMDGFCLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSK 376
+L+ G C G++ AE M+S + ++++ LI+ Y K ++ + S+Y+ M+
Sbjct: 233 SLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQM 292
Query: 377 GIKPTVVTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEA 436
I P V TY++L GL ++V+ A+K+ D M G + TY+T +G K+ + +
Sbjct: 293 SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDG 352
Query: 437 VELFRTLRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQG 496
++L + + + N LI G ++G++ A +F + L+PN+ +YNI++ G
Sbjct: 353 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 412
Query: 497 LCNDGQMDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPD 556
L +G+++KA F M++ D+IT+ ++IHG + + +L +K+K K+V PD
Sbjct: 413 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 472
Query: 557 ASIVSIVV 564
+I++
Sbjct: 473 FKAYTIMI 480
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 182/378 (48%), Gaps = 5/378 (1%)
Query: 207 TVTYSTII-DGLCKEGFVDKAKALFLQMKDENINPDVVTYNSLIHGLCHANDWNEAKRLF 265
T+ Y ++ GL F D A LF+ M P +V +N ++ + ++ L+
Sbjct: 50 TIDYREVLRSGLHNIKF-DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLW 108
Query: 266 IEMMD-QGVQ--PSVVTFNVIMDELCKNRKMDEASRLLDLMVQRGVRPNACTYNTLMDGF 322
+ + +G++ P + T N++++ C+ + A L M++ G+ P+ T ++L++GF
Sbjct: 109 KRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGF 168
Query: 323 CLMGKINRAEELFGSMESMGCKHDDVSYNILINGYCKNKEVEEALSLYREMVSKGIKPTV 382
CL I A + G ME MG K D V ILI+ CKN+ V AL + + M +GI P V
Sbjct: 169 CLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNV 228
Query: 383 VTYNTLFLGLFEIHQVEHALKLFDEMQRDGVAADTRTYTTFIDGLCKNGYIIEAVELFRT 442
VTY++L GL + ++ A + EM + + T++ ID K G + + +++
Sbjct: 229 VTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKM 288
Query: 443 LRILKCELDIQAYNCLIDGLCKSGRLKFAWELFCSLPHGVLVPNVVTYNIMIQGLCNDGQ 502
+ + + ++ Y+ LI GLC R+ A ++ + PNVVTY+ + G +
Sbjct: 289 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 348
Query: 503 MDKARDLFLDMEENAAAPDVITFDMLIHGFIRINEPSKVNELLHKMKEKKVMPDASIVSI 562
+D L DM + A + ++ + LI G+ + + + M ++P+ +I
Sbjct: 349 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 408
Query: 563 VVDLLVKNEISLKSLPSF 580
V+ L N K+L F
Sbjct: 409 VLAGLFANGEVEKALSRF 426
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,247,617
Number of Sequences: 539616
Number of extensions: 8672353
Number of successful extensions: 34451
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 19052
Number of HSP's gapped (non-prelim): 3328
length of query: 595
length of database: 191,569,459
effective HSP length: 123
effective length of query: 472
effective length of database: 125,196,691
effective search space: 59092838152
effective search space used: 59092838152
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)