Query 040032
Match_columns 144
No_of_seqs 112 out of 837
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 04:24:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040032.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040032hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02159 Fe(2+) transport prot 100.0 1.5E-27 3.3E-32 202.1 13.8 116 28-143 29-144 (337)
2 TIGR00820 zip ZIP zinc/iron tr 99.9 2.9E-28 6.2E-33 205.1 7.8 112 32-143 5-116 (324)
3 KOG1558 Fe2+/Zn2+ regulated tr 99.9 6.2E-27 1.3E-31 197.7 11.0 115 30-144 3-117 (327)
4 PF02535 Zip: ZIP Zinc transpo 99.7 5.6E-18 1.2E-22 138.6 8.8 100 44-143 2-101 (317)
5 PRK04201 zinc transporter ZupT 98.8 3.3E-08 7.3E-13 81.1 9.5 84 51-142 12-95 (265)
6 KOG2694 Putative zinc transpor 97.1 0.0019 4.1E-08 54.3 7.0 65 74-141 100-164 (361)
7 PF02535 Zip: ZIP Zinc transpo 96.4 0.024 5.2E-07 46.3 8.6 82 49-137 235-316 (317)
8 COG0428 Predicted divalent hea 94.8 0.33 7.2E-06 40.2 9.7 89 46-141 10-98 (266)
9 PRK04201 zinc transporter ZupT 93.8 0.71 1.5E-05 37.8 9.5 53 76-139 210-262 (265)
10 KOG3907 ZIP-like zinc transpor 92.3 0.02 4.3E-07 47.7 -1.8 88 50-143 10-125 (303)
11 KOG1558 Fe2+/Zn2+ regulated tr 91.1 1.3 2.8E-05 38.0 8.0 93 42-140 232-326 (327)
12 TIGR00820 zip ZIP zinc/iron tr 89.0 3.2 6.9E-05 35.2 8.6 82 54-139 239-322 (324)
13 COG0428 Predicted divalent hea 88.5 3.5 7.6E-05 34.1 8.3 55 77-141 209-264 (266)
14 PLN02159 Fe(2+) transport prot 86.8 3.9 8.4E-05 35.1 7.9 85 51-139 249-335 (337)
15 KOG2693 Putative zinc transpor 85.5 0.77 1.7E-05 41.1 3.0 65 41-109 131-196 (453)
16 KOG2474 Zinc transporter and r 46.0 24 0.00052 31.3 3.4 28 76-103 73-100 (406)
17 KOG2693 Putative zinc transpor 43.7 7.8 0.00017 34.8 0.0 77 55-138 374-450 (453)
18 KOG3907 ZIP-like zinc transpor 40.5 6.4 0.00014 33.1 -0.9 45 84-130 243-289 (303)
19 PF13937 DUF4212: Domain of un 40.4 1E+02 0.0023 21.2 5.3 23 117-139 41-63 (81)
20 COG2239 MgtE Mg/Co/Ni transpor 35.1 23 0.0005 31.7 1.6 58 46-108 359-416 (451)
21 PF00822 PMP22_Claudin: PMP-22 34.1 96 0.0021 22.5 4.6 48 87-135 107-160 (166)
22 KOG1483 Zn2+ transporter ZNT1 33.4 3.5E+02 0.0077 24.2 8.9 95 5-110 9-106 (404)
23 TIGR00400 mgtE Mg2+ transporte 27.5 1.3E+02 0.0028 26.4 5.1 22 49-70 394-415 (449)
24 KOG4054 Uncharacterized conser 26.3 3.3E+02 0.0073 21.6 7.8 49 83-131 102-156 (183)
25 PF13903 Claudin_2: PMP-22/EMP 24.9 2.6E+02 0.0057 19.9 9.3 20 118-137 147-166 (172)
26 TIGR03647 Na_symport_sm probab 24.4 2.4E+02 0.0051 19.2 5.1 24 117-140 37-60 (77)
27 PF11283 DUF3084: Protein of u 23.1 1.3E+02 0.0027 20.9 3.3 58 52-109 5-71 (79)
28 PF07086 DUF1352: Protein of u 22.8 3.9E+02 0.0085 21.2 7.7 51 59-110 79-133 (186)
29 PHA00679 hypothetical protein 20.4 89 0.0019 20.6 2.0 16 81-96 4-19 (71)
No 1
>PLN02159 Fe(2+) transport protein
Probab=99.95 E-value=1.5e-27 Score=202.08 Aligned_cols=116 Identities=46% Similarity=0.873 Sum_probs=107.5
Q ss_pred CCCCCCCCccccccchhHHHHHHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhc
Q 040032 28 CTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENL 107 (144)
Q Consensus 28 ~~~~~~~~~~d~~~~l~lKi~~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~ 107 (144)
|.++.+.+|+|+++++++|++++++++++|++|+++|++.++.++.|.+++.+.++|||||||||||+|+|||||+.|++
T Consensus 29 c~~~~~~~c~~~~~~~~lki~al~vil~~sllg~~lP~~~~~~~~~~~~~~~~~~~~~FagGV~Lat~flHLLp~a~e~l 108 (337)
T PLN02159 29 CDSESANPCINKAKALPLKIIAIVAILTTSMIGVTAPLFSRYVSFLRPDGNIFTIVKCFASGIILGTGFMHVLPDSFEML 108 (337)
T ss_pred ccCCCCcCccCchhccchHHHHHHHHHHHHHHHHHHHHHHHHccccCCchhHHHHHHHHhhhHhHHHHHHHhhhHHHHhh
Confidence 55544678999999999999999999999999999999998887778888999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhhc
Q 040032 108 TSPCLDEHPWADFPFTGFAAMVAAIGTLMIDAFATS 143 (144)
Q Consensus 108 ~~~cl~~~~~~~yP~a~li~~~Gf~l~~llE~~~~~ 143 (144)
+++|++.+.|++||++++++++|+++++++|+++++
T Consensus 109 ~~~cl~~~~~~~yP~~~~i~~~g~~l~~liE~~~~~ 144 (337)
T PLN02159 109 SSKCLEDNPWHKFPFAGFVAMLSGLVTLAIDSMATS 144 (337)
T ss_pred hchhhcCCCcccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888899999999999999999999998763
No 2
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=99.95 E-value=2.9e-28 Score=205.07 Aligned_cols=112 Identities=58% Similarity=1.024 Sum_probs=105.0
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCc
Q 040032 32 PEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPC 111 (144)
Q Consensus 32 ~~~~~~d~~~~l~lKi~~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~c 111 (144)
.+++|+|.++.+++|++++++|++.|++|+++|++.++.++.+.++++++++||||+||||||||+|||||++|+++++|
T Consensus 5 ~~~~~~~~~~~~~lki~~lfvil~~slig~~lP~i~~~~~~~~~~~~~~~~~k~FagGVfLATafvHLLp~a~e~l~~~c 84 (324)
T TIGR00820 5 DDNSCNNKEGALKLKIVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEMLSSPC 84 (324)
T ss_pred cCCCCCCcccccccHHHHHHHHHHHHHHHHhhHHHhhhccccCCCcchhHHHHHhccceeeeeeeeeeccHHHHhhcCcc
Confidence 35688899999999999999999999999999988888888788889999999999999999999999999999999999
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHHHHhhc
Q 040032 112 LDEHPWADFPFTGFAAMVAAIGTLMIDAFATS 143 (144)
Q Consensus 112 l~~~~~~~yP~a~li~~~Gf~l~~llE~~~~~ 143 (144)
+++..|++||++++++++|+++++++|++.++
T Consensus 85 l~~~~~~~yP~~~~i~~~g~~l~~~iE~~~~~ 116 (324)
T TIGR00820 85 LESTPWGKFPFAGFIAMISAILTLLVDLFATS 116 (324)
T ss_pred cCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 98878899999999999999999999998764
No 3
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=6.2e-27 Score=197.72 Aligned_cols=115 Identities=48% Similarity=0.816 Sum_probs=107.2
Q ss_pred CCCCCCccccccchhHHHHHHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCC
Q 040032 30 CDPEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTS 109 (144)
Q Consensus 30 ~~~~~~~~d~~~~l~lKi~~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~ 109 (144)
|+.+++|+|++..+.+|++++++|+++|++++++|++.+|.+..+.+++.+++.+|||+||||||+|+|||||++|++++
T Consensus 3 ~~~~~~~~~~~~~~~lKi~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~ 82 (327)
T KOG1558|consen 3 CQAPASCADKMGALLLKIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALES 82 (327)
T ss_pred ccccccccchhhhhhHHHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhc
Confidence 44447788999999999999999999999999999999987777788999999999999999999999999999999999
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHHHHHHHHHhhcC
Q 040032 110 PCLDEHPWADFPFTGFAAMVAAIGTLMIDAFATSY 144 (144)
Q Consensus 110 ~cl~~~~~~~yP~a~li~~~Gf~l~~llE~~~~~~ 144 (144)
.|++.+.|.+|||+++++++||++++++|++++.|
T Consensus 83 ~~~~~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~ 117 (327)
T KOG1558|consen 83 LCLADNPWGKFPFAEFIAMLGFFLTLLIDEITTSY 117 (327)
T ss_pred ccccCCCCcCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988899999999999999999999999998753
No 4
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=99.74 E-value=5.6e-18 Score=138.59 Aligned_cols=100 Identities=30% Similarity=0.458 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHH
Q 040032 44 KYKLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFT 123 (144)
Q Consensus 44 ~lKi~~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a 123 (144)
.+|+.+++++++.+++++++|++.++.++.+.+++++++++|||+||+|+++|+|||||+.|.+++.-...+..++||++
T Consensus 2 ~~ki~~~~~i~~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~ 81 (317)
T PF02535_consen 2 GLKIVAILAIFIVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLA 81 (317)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhH
Confidence 47999999999999999999999988766567899999999999999999999999999999996542212245678999
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 040032 124 GFAAMVAAIGTLMIDAFATS 143 (144)
Q Consensus 124 ~li~~~Gf~l~~llE~~~~~ 143 (144)
..++++|+++++++|++.+.
T Consensus 82 ~~~~~~Gfl~~~~ie~i~~~ 101 (317)
T PF02535_consen 82 FLIFLVGFLLFFFIERILHS 101 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998853
No 5
>PRK04201 zinc transporter ZupT; Provisional
Probab=98.80 E-value=3.3e-08 Score=81.09 Aligned_cols=84 Identities=26% Similarity=0.359 Sum_probs=65.4
Q ss_pred HHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHHHHHHH
Q 040032 51 ASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVA 130 (144)
Q Consensus 51 ~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~li~~~G 130 (144)
++-...+.+|++++++.++ .+++++..+.+||+||++++++.|++||+.|++++.. ....+++.+....++|
T Consensus 12 ~l~~~~t~lGal~~~~~~~-----~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~---~~~~~~~~~~~~~~~G 83 (265)
T PRK04201 12 LLAGLATGIGSLIAFFGKK-----PNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAY---GEGMGPWLGYGAFFGG 83 (265)
T ss_pred HHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---cccccHHHHHHHHHHH
Confidence 3445567788888776553 4678999999999999999999999999999885431 1123455677788999
Q ss_pred HHHHHHHHHHhh
Q 040032 131 AIGTLMIDAFAT 142 (144)
Q Consensus 131 f~l~~llE~~~~ 142 (144)
+++++.+|+...
T Consensus 84 ~ll~~~ld~~~~ 95 (265)
T PRK04201 84 ILGIFLIDRLVP 95 (265)
T ss_pred HHHHHHHHHhcc
Confidence 999999998764
No 6
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=97.10 E-value=0.0019 Score=54.33 Aligned_cols=65 Identities=22% Similarity=0.363 Sum_probs=50.2
Q ss_pred CCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHHHHHHHHHHHHHHHHHh
Q 040032 74 SPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVAAIGTLMIDAFA 141 (144)
Q Consensus 74 ~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~li~~~Gf~l~~llE~~~ 141 (144)
...+|-+..+-+||-|=+|+--|+|+||||.|.-+.. |.. .+..-=-++.++.|++.+..+|++.
T Consensus 100 ~ag~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~~--p~~-e~sl~siGLwVlaGiLtF~~ieK~f 164 (361)
T KOG2694|consen 100 SAGQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQD--PSS-ENSLSSIGLWVLAGILTFSLIEKLF 164 (361)
T ss_pred chhHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCCC--CCC-CCchhhhhHHHHHHHHHHHHHHHHH
Confidence 3457888999999999999999999999999986321 111 1111113799999999999999986
No 7
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=96.39 E-value=0.024 Score=46.29 Aligned_cols=82 Identities=20% Similarity=0.249 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHHHHH
Q 040032 49 AIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAM 128 (144)
Q Consensus 49 ~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~li~~ 128 (144)
..++.-+.+-+|..+=+.+.+.......+.+..++.+|++|.|+-.++.+++||..+.-++.. .--+..+...
T Consensus 235 ~~~~~sl~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~~~-------~~~~~~~~~~ 307 (317)
T PF02535_consen 235 LLLLFSLSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHSRK-------SRLLKFLGFL 307 (317)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchH-------HHHHHHHHHH
Confidence 334444455566666555522222344677899999999999999999999999998765310 0014567777
Q ss_pred HHHHHHHHH
Q 040032 129 VAAIGTLMI 137 (144)
Q Consensus 129 ~Gf~l~~ll 137 (144)
+|+.++.++
T Consensus 308 ~G~~~~~~l 316 (317)
T PF02535_consen 308 IGFLLMALL 316 (317)
T ss_pred HHHHHHHHH
Confidence 888777654
No 8
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=94.82 E-value=0.33 Score=40.19 Aligned_cols=89 Identities=22% Similarity=0.275 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHH
Q 040032 46 KLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGF 125 (144)
Q Consensus 46 Ki~~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~l 125 (144)
+...-+.....+.+|..+=+.. .+ +.++++...+..|++||.++.++.+++|++.|........ ..+..| ...
T Consensus 10 ~~~~~ll~~~~t~lG~~~~~~~---~~-~~~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~~--~~~~~~-~~~ 82 (266)
T COG0428 10 ALLLGLLAGLATALGALLVVLA---VR-KVSPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGDS--THEFLP-ALA 82 (266)
T ss_pred HHHHHHHHHHHHHHhHHHHHHh---hc-ccchHHHHHHHhhhhhHHHHHHHHHhcchHHhhhcccccc--chhhHH-HHH
Confidence 3333344445555555443332 12 5688999999999999999999999999999988653211 111233 122
Q ss_pred HHHHHHHHHHHHHHHh
Q 040032 126 AAMVAAIGTLMIDAFA 141 (144)
Q Consensus 126 i~~~Gf~l~~llE~~~ 141 (144)
-...|+.++..+|+.+
T Consensus 83 g~~~G~~~~~~~d~l~ 98 (266)
T COG0428 83 GFLLGVLFIFLLDRLV 98 (266)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 2678888999998865
No 9
>PRK04201 zinc transporter ZupT; Provisional
Probab=93.80 E-value=0.71 Score=37.84 Aligned_cols=53 Identities=15% Similarity=0.122 Sum_probs=41.5
Q ss_pred ChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 040032 76 ERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVAAIGTLMIDA 139 (144)
Q Consensus 76 ~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~li~~~Gf~l~~llE~ 139 (144)
.+.+..++..|++|.++-.++-+++||+.|.-++ +..-+-..+|+.++.....
T Consensus 210 ~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~~~-----------~~~~~~~~~G~~~m~~~~~ 262 (265)
T PRK04201 210 SPVVMGAIFAAVAGIMVFISLDELLPAAKEYGPH-----------HLPSYGLIAGMAVMALSLV 262 (265)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-----------hHHHHHHHHHHHHHHHHHH
Confidence 5567788999999999999999999999874221 1356677888888877664
No 10
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.26 E-value=0.02 Score=47.74 Aligned_cols=88 Identities=16% Similarity=0.337 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCC-------------------
Q 040032 50 IASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSP------------------- 110 (144)
Q Consensus 50 i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~------------------- 110 (144)
...+++.+.+.|.+|+.... .+.-+-+.+.+|+|-+-+||+.-.+||..+++..+
T Consensus 10 ssamlvgsylaG~IPL~~~~------se~rl~lvtv~GAgll~gtAl~viIpegv~sly~~~~~~~~~g~~~~~~~~~~~ 83 (303)
T KOG3907|consen 10 SSAMLVGSYLAGSIPLYYIL------SEERLKLVTVLGAGLLVGTALTVIIPEGVSSLYVKIAVLSILGIGMLLGTSFML 83 (303)
T ss_pred HHHHHHHHHHhcccceeeec------chhheEEEEeecccceecceeEEEecccHHHHhhhHHHHhhhccchhcccccce
Confidence 34678899999999986431 11112345678888888999988888888766510
Q ss_pred --------ccCCCCCCCC-cHHHHHHHHHHHHHHHHHHHhhc
Q 040032 111 --------CLDEHPWADF-PFTGFAAMVAAIGTLMIDAFATS 143 (144)
Q Consensus 111 --------cl~~~~~~~y-P~a~li~~~Gf~l~~llE~~~~~ 143 (144)
|.+.....++ ..-++....||.+|+++||..+.
T Consensus 84 vIp~~i~a~v~~~~~~~~~~~IG~slVLgfv~mLlVdqi~tv 125 (303)
T KOG3907|consen 84 VIPEGIKAEVEHDGHVGVHALIGFSLVLGFVFMLLVDQIGTV 125 (303)
T ss_pred eccccceeeeeecCCcChheeeeHHHHHHHHHHHhhhccccE
Confidence 1110011233 24556688999999999988753
No 11
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=91.12 E-value=1.3 Score=38.02 Aligned_cols=93 Identities=14% Similarity=0.140 Sum_probs=61.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhccc-cCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCC
Q 040032 42 ALKYKLAAIASILVAGAIGVYLPVLGKTI-PALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADF 120 (144)
Q Consensus 42 ~l~lKi~~i~vIl~~sllg~~lPl~~~~~-~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~y 120 (144)
...+.+...+.--+++-+|..+=+.++.. ...........+++.+|+|.|+-++|+++||+-+..-+... .+.
T Consensus 232 ~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~------~~~ 305 (327)
T KOG1558|consen 232 TFKSAVLMALFFSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQS------LKL 305 (327)
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhh------HHH
Confidence 44455555555556666776666655432 22334566789999999999999999999997665432110 112
Q ss_pred c-HHHHHHHHHHHHHHHHHHH
Q 040032 121 P-FTGFAAMVAAIGTLMIDAF 140 (144)
Q Consensus 121 P-~a~li~~~Gf~l~~llE~~ 140 (144)
+ ...+...+|+-+|..+.+.
T Consensus 306 ~i~~~i~~~~G~alms~l~~w 326 (327)
T KOG1558|consen 306 QILKLIALLLGFALMSLLAIW 326 (327)
T ss_pred HHHHHHHHHHhHHHHHHHHHh
Confidence 3 4677788888888777543
No 12
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=89.01 E-value=3.2 Score=35.21 Aligned_cols=82 Identities=13% Similarity=0.071 Sum_probs=48.5
Q ss_pred HHHHHHHhhhhhhhccccCCCC--ChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHHHHHHHH
Q 040032 54 LVAGAIGVYLPVLGKTIPALSP--ERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVAA 131 (144)
Q Consensus 54 l~~sllg~~lPl~~~~~~~~~~--~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~li~~~Gf 131 (144)
-+.+-+|..+-+........+. ...+..+++++++|.|+-+++.|++|+-+..-+.++ ...+.=+..+...+|+
T Consensus 239 sl~tPiG~~iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~----~~~~~~~~~~~~~~G~ 314 (324)
T TIGR00820 239 AVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQS----NLRLQIMAYIALLLGA 314 (324)
T ss_pred HHhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc----hHHHHHHHHHHHHHHH
Confidence 3444455555554432111111 124679999999999999999999997653211110 1111124566777888
Q ss_pred HHHHHHHH
Q 040032 132 IGTLMIDA 139 (144)
Q Consensus 132 ~l~~llE~ 139 (144)
.+|-++-+
T Consensus 315 ~~Ma~l~~ 322 (324)
T TIGR00820 315 GLMSLLAK 322 (324)
T ss_pred HHHHHHHH
Confidence 88877654
No 13
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=88.47 E-value=3.5 Score=34.10 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=45.2
Q ss_pred hhHHHHHHHhhhhHHHHHHhhhhhHHHHHhc-CCCccCCCCCCCCcHHHHHHHHHHHHHHHHHHHh
Q 040032 77 RKIFFLIKAFAAGVILSTGFVHVLPDAFENL-TSPCLDEHPWADFPFTGFAAMVAAIGTLMIDAFA 141 (144)
Q Consensus 77 ~~~l~l~~~FagGVfLataflHLLPea~E~~-~~~cl~~~~~~~yP~a~li~~~Gf~l~~llE~~~ 141 (144)
+.++..+..|++|.++-.++-.++||+.+.= +++ +.+......|+.++++.|...
T Consensus 209 ~~~l~~~la~aaG~mv~v~~~eliPea~~~~~~~~----------~~~~~~~~~G~~~~~~l~~~l 264 (266)
T COG0428 209 PLVLPFALAFAAGAMVYVVVDELLPEAKRHGGGSE----------KLATAGLFAGFLVMAVLDVLL 264 (266)
T ss_pred HHHHHHHHHHHhhcchhhhHHHHhhHHHhcCCCch----------HHHHHHHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999999952 221 236677789999999998754
No 14
>PLN02159 Fe(2+) transport protein
Probab=86.78 E-value=3.9 Score=35.14 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhhhhhhhccccCCCCC--hhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHHHHH
Q 040032 51 ASILVAGAIGVYLPVLGKTIPALSPE--RKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAM 128 (144)
Q Consensus 51 ~vIl~~sllg~~lPl~~~~~~~~~~~--~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~li~~ 128 (144)
++--+.+-+|..+-+........+.+ ..+..+++++++|.|+-+++.+++|+-+..-+ .. ...+..+ +..+...
T Consensus 249 ~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~--~~-~~~~~~~-~~~~~l~ 324 (337)
T PLN02159 249 FFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPK--LQ-GSIKLQI-KCFFAAL 324 (337)
T ss_pred HHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cc-ccHHHHH-HHHHHHH
Confidence 33334445555555544332111111 25679999999999999999999997543211 11 0001111 3455677
Q ss_pred HHHHHHHHHHH
Q 040032 129 VAAIGTLMIDA 139 (144)
Q Consensus 129 ~Gf~l~~llE~ 139 (144)
+|+.+|-++-+
T Consensus 325 ~G~~~Mall~~ 335 (337)
T PLN02159 325 LGCGGMSIVAK 335 (337)
T ss_pred HHHHHHHHHHh
Confidence 88888876644
No 15
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=85.50 E-value=0.77 Score=41.06 Aligned_cols=65 Identities=20% Similarity=0.409 Sum_probs=43.2
Q ss_pred cchhHHHHHHHHHHHHHHHHhh-hhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCC
Q 040032 41 QALKYKLAAIASILVAGAIGVY-LPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTS 109 (144)
Q Consensus 41 ~~l~lKi~~i~vIl~~sllg~~-lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~ 109 (144)
+.+..-+.+.+++-+.++++-. +|..-+ ....+..+.+...+|.|-+++=+++|++||+.+...+
T Consensus 131 ~~w~~g~~a~~lisl~~~l~l~lvP~~~~----~~~~~~~l~~l~a~a~gtL~gDa~lhLiP~~l~~~~~ 196 (453)
T KOG2693|consen 131 ELWLYGILATLLISLAPLLGLLLVPLRKN----SKKKLELLIFLLALAVGTLLGDALLHLIPEALGFHSH 196 (453)
T ss_pred eeEEechHHHHHHHHHHhhheeecccccc----chhHHHHHHHHHHHHHhhhhHHHHhhhCchhcccccC
Confidence 3444455555555555555432 232211 1134677889999999999999999999999996654
No 16
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=45.97 E-value=24 Score=31.31 Aligned_cols=28 Identities=36% Similarity=0.599 Sum_probs=25.1
Q ss_pred ChhHHHHHHHhhhhHHHHHHhhhhhHHH
Q 040032 76 ERKIFFLIKAFAAGVILSTGFVHVLPDA 103 (144)
Q Consensus 76 ~~~~l~l~~~FagGVfLataflHLLPea 103 (144)
+++++...+.||+||.|+..|--++.|+
T Consensus 73 ~~~~l~~~lGfAaGvmLaaSf~S~l~~s 100 (406)
T KOG2474|consen 73 SRKVLDISLGFAAGVMLAASFWSLLAHS 100 (406)
T ss_pred chhhhhhhhchhhhHHHHHHHHHhhccc
Confidence 4589999999999999999998788887
No 17
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=43.70 E-value=7.8 Score=34.75 Aligned_cols=77 Identities=23% Similarity=0.255 Sum_probs=49.3
Q ss_pred HHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCCCccCCCCCCCCcHHHHHHHHHHHHH
Q 040032 55 VAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTSPCLDEHPWADFPFTGFAAMVAAIGT 134 (144)
Q Consensus 55 ~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~~cl~~~~~~~yP~a~li~~~Gf~l~ 134 (144)
+++++|..+.+....-. .+.+-.++-.+++|-||-.|+..|+||-.|.-++... .+..+-.--+..+.|+.+|
T Consensus 374 l~a~~G~~ig~~~~~~~----~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~---~~~~~~lq~~gil~G~~~m 446 (453)
T KOG2693|consen 374 LTAFAGLAIGLVLGAGD----EEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKK---RKFCFALQIFGILAGFTIM 446 (453)
T ss_pred HHHHhhhheeEEecCCC----ccchHHHHHHHhcCcEEEEEehhhchhhhhccccchh---HHHHHHHHHHHHHhhhHHH
Confidence 44556666666554321 3555667778899999999999999999998764311 0222223334566777777
Q ss_pred HHHH
Q 040032 135 LMID 138 (144)
Q Consensus 135 ~llE 138 (144)
+++-
T Consensus 447 l~ia 450 (453)
T KOG2693|consen 447 LLIA 450 (453)
T ss_pred hhhh
Confidence 7653
No 18
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.50 E-value=6.4 Score=33.10 Aligned_cols=45 Identities=29% Similarity=0.395 Sum_probs=29.5
Q ss_pred HHhhhhHHHHHHhhhhhHHHHHhcCCCccC--CCCCCCCcHHHHHHHHH
Q 040032 84 KAFAAGVILSTGFVHVLPDAFENLTSPCLD--EHPWADFPFTGFAAMVA 130 (144)
Q Consensus 84 ~~FagGVfLataflHLLPea~E~~~~~cl~--~~~~~~yP~a~li~~~G 130 (144)
--|++|-||-++++|.+||--. .+.++. ......||.-|+...++
T Consensus 243 mLfSaGtfLYvatvhvlpe~~~--~dh~l~vea~~g~~l~~~E~v~li~ 289 (303)
T KOG3907|consen 243 MLFSAGTFLYVATVHVLPELSH--TDHSLSVEATGGAVLPHDELVYLII 289 (303)
T ss_pred eeecCCeeEEEEEEEEccccCC--CCcccccccccccccchhHHHHHHH
Confidence 3589999999999999999776 223332 11123577666655443
No 19
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=40.40 E-value=1e+02 Score=21.17 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=18.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHH
Q 040032 117 WADFPFTGFAAMVAAIGTLMIDA 139 (144)
Q Consensus 117 ~~~yP~a~li~~~Gf~l~~llE~ 139 (144)
..+||+.+.+..=|..+++++-.
T Consensus 41 ~~GfPlgfw~aaQGsi~~fviLi 63 (81)
T PF13937_consen 41 FGGFPLGFWFAAQGSIIVFVILI 63 (81)
T ss_pred eCCCChHHHHHHHhHHHHHHHHH
Confidence 56889999999988888877654
No 20
>COG2239 MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]
Probab=35.12 E-value=23 Score=31.75 Aligned_cols=58 Identities=12% Similarity=0.131 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcC
Q 040032 46 KLAAIASILVAGAIGVYLPVLGKTIPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLT 108 (144)
Q Consensus 46 Ki~~i~vIl~~sllg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~ 108 (144)
.++.+.++..+..++..+|.+... ...--+....+.-+=++.|+-.--++|=..++++
T Consensus 359 ~vG~~~G~vl~~~~~~~~~~~~~~-----~~~l~~~v~~al~~~~~~A~l~G~~iP~ll~kl~ 416 (451)
T COG2239 359 GVGLLLGLVLAIIIGLRVPAWLYG-----GLLLGLIVALALLLNILFAALVGVLIPILLKKLG 416 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-----CchHHHHHHHHHHHHHHHHHHhhchHHHHHHHcC
Confidence 344444444444444445544321 1233345555666667777777778888888876
No 21
>PF00822 PMP22_Claudin: PMP-22/EMP/MP20/Claudin family; InterPro: IPR004031 Several vertebrate small integral membrane glycoproteins are evolutionary related [, , ], including eye lens specific membrane protein 20 (MP20 or MP19); epithelial membrane protein-1 (EMP-1), which is also known as tumor-associated membrane protein (TMP) or as squamous cell-specific protein Cl-20; epithelial membrane protein-2 (EMP-2), which is also known as XMP; epithelial membrane protein-3 (EMP-3), also known as YMP; and peripheral myelin protein 22 (PMP-22), which is expressed in many tissues but mainly by Schwann cells as a component of myelin of the peripheral nervous system (PNS). PMP-22 probably plays a role both in myelinization and in cell proliferation. Mutations affecting PMP-22 are associated with hereditary motor and sensory neuropathies such as Charcot-Marie-Tooth disease type 1A (CMT-1A) in human or the trembler phenotype in mice. The proteins of this family are about 160 to 173 amino acid residues in size, and contain four transmembrane segments. PMP-22, EMP-1, -2 and -3 are highly similar, while MP20 is more distantly related. This family also includes the claudins, which are components of tight junctions.; GO: 0016020 membrane
Probab=34.05 E-value=96 Score=22.53 Aligned_cols=48 Identities=17% Similarity=0.224 Sum_probs=21.7
Q ss_pred hhhHHHHHHhhhhhH------HHHHhcCCCccCCCCCCCCcHHHHHHHHHHHHHH
Q 040032 87 AAGVILSTGFVHVLP------DAFENLTSPCLDEHPWADFPFTGFAAMVAAIGTL 135 (144)
Q Consensus 87 agGVfLataflHLLP------ea~E~~~~~cl~~~~~~~yP~a~li~~~Gf~l~~ 135 (144)
+|..++.+++..+.+ +..+.++++..+ ....+|-++..+.-+++.+.+
T Consensus 107 ag~l~~~agl~~l~~~~~y~~~~~~~~~~~~~~-~~~~~~G~s~~lgW~~~~l~~ 160 (166)
T PF00822_consen 107 AGILFILAGLCLLIAVSWYTAVIVQEFSDPSRP-NIKYEFGWSFYLGWVAFILLL 160 (166)
T ss_pred ceeeeHHHhhhhheeEEEEeccCchhhccccCC-CCcEEehHHHHHHHHHHHHHH
Confidence 444455555555544 223333332111 223455566666555555544
No 22
>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=33.39 E-value=3.5e+02 Score=24.15 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=55.8
Q ss_pred chhHHHHHHHHHHHhhcccccCCCCCCCCCCccccccchhHHHHHHHHHHHHHHHHhhhhhhhccc-cCCC-CChh-HHH
Q 040032 5 SRSLCIIFFCILLVLLPNIVRGECTCDPEDDDRDKTQALKYKLAAIASILVAGAIGVYLPVLGKTI-PALS-PERK-IFF 81 (144)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~lKi~~i~vIl~~sllg~~lPl~~~~~-~~~~-~~~~-~l~ 81 (144)
-|..+...-+++.|.++-....-|..-+ --....++..-++.+++++.+ +..++. +..+ ...+ --.
T Consensus 9 ~rli~~l~ltiiFfvLEli~gyv~~sLa-------LiadSfHML~dIiaLivaf~~----ik~a~~~~~~k~tyGw~rAE 77 (404)
T KOG1483|consen 9 LRLISVLVLTIIFFVLELITGYVTNSLA-------LIADSFHMLNDIIALIVAFWA----IKEAKRIPLQKYTYGWARAE 77 (404)
T ss_pred cceeehHHHHHHHHHhhhhhhcccchHH-------HHhhHHHHHHHHHHHHHHHHH----HHhhhcCcccccCcchhHHH
Confidence 3555666666777777766655322221 012334666665555554443 333222 2212 2222 246
Q ss_pred HHHHhhhhHHHHHHhhhhhHHHHHhcCCC
Q 040032 82 LIKAFAAGVILSTGFVHVLPDAFENLTSP 110 (144)
Q Consensus 82 l~~~FagGVfLataflHLLPea~E~~~~~ 110 (144)
++.++..++|+.+.=+|.+=||.|.+=++
T Consensus 78 ilGalvN~ifl~alc~~I~~EA~~R~I~p 106 (404)
T KOG1483|consen 78 ILGALVNAIFLTALCVSILIEAIERIIEP 106 (404)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 77788889999999999999999998654
No 23
>TIGR00400 mgtE Mg2+ transporter (mgtE). This family of prokaryotic proteins models a class of Mg++ transporter first described in Bacillus firmus. May form a homodimer.
Probab=27.47 E-value=1.3e+02 Score=26.41 Aligned_cols=22 Identities=32% Similarity=0.536 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHhhhhhhhccc
Q 040032 49 AIASILVAGAIGVYLPVLGKTI 70 (144)
Q Consensus 49 ~i~vIl~~sllg~~lPl~~~~~ 70 (144)
.++.+.+++++|.++|++++|+
T Consensus 394 ~~~~~~~~~~~G~~lp~~~~k~ 415 (449)
T TIGR00400 394 LFVSLTVAKILGGLLPIVAKLL 415 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3344556666777777776654
No 24
>KOG4054 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.30 E-value=3.3e+02 Score=21.63 Aligned_cols=49 Identities=14% Similarity=-0.034 Sum_probs=28.5
Q ss_pred HHHhhhhHHH-HHHh---hhhhHHHHHhcCCCcc--CCCCCCCCcHHHHHHHHHH
Q 040032 83 IKAFAAGVIL-STGF---VHVLPDAFENLTSPCL--DEHPWADFPFTGFAAMVAA 131 (144)
Q Consensus 83 ~~~FagGVfL-ataf---lHLLPea~E~~~~~cl--~~~~~~~yP~a~li~~~Gf 131 (144)
....|-|++. ...+ -..+|+..|-.+.+.- ....+.+||..++.+.+|+
T Consensus 102 l~m~a~~lf~i~p~~~~~~~~f~~v~e~~t~~e~~~s~~~~~~~p~~y~~~~la~ 156 (183)
T KOG4054|consen 102 LYMIAMGLFMIFPLVYGVGGQFCAVRELATMEERNSSTTVKLEFPGWYLFLVLAV 156 (183)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHHHHHHHHccccccceeeecccHHHHHHHHHH
Confidence 3445556554 3333 3448999886653211 1234578898777766665
No 25
>PF13903 Claudin_2: PMP-22/EMP/MP20/Claudin tight junction
Probab=24.86 E-value=2.6e+02 Score=19.94 Aligned_cols=20 Identities=25% Similarity=0.223 Sum_probs=15.2
Q ss_pred CCCcHHHHHHHHHHHHHHHH
Q 040032 118 ADFPFTGFAAMVAAIGTLMI 137 (144)
Q Consensus 118 ~~yP~a~li~~~Gf~l~~ll 137 (144)
.+|-+++.+..+|+.+.+.-
T Consensus 147 ~~~gwSf~la~~a~~~~l~a 166 (172)
T PF13903_consen 147 YSYGWSFWLAWVAFILLLLA 166 (172)
T ss_pred EEECHHHHHHHHHHHHHHHH
Confidence 46778999888888776653
No 26
>TIGR03647 Na_symport_sm probable solute:sodium symporter small subunit. Members of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments.
Probab=24.40 E-value=2.4e+02 Score=19.21 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=18.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHH
Q 040032 117 WADFPFTGFAAMVAAIGTLMIDAF 140 (144)
Q Consensus 117 ~~~yP~a~li~~~Gf~l~~llE~~ 140 (144)
..+||+.+.+..-|..+++++-.+
T Consensus 37 ~~GfPlgfw~aaQGsi~~fviLi~ 60 (77)
T TIGR03647 37 FFGFPLGFWFAQQGSIYVFVVLIF 60 (77)
T ss_pred eCCCChHHHHHHhhHHHHHHHHHH
Confidence 467899999999888888776543
No 27
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=23.09 E-value=1.3e+02 Score=20.90 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhhhhhhcc---------ccCCCCChhHHHHHHHhhhhHHHHHHhhhhhHHHHHhcCC
Q 040032 52 SILVAGAIGVYLPVLGKT---------IPALSPERKIFFLIKAFAAGVILSTGFVHVLPDAFENLTS 109 (144)
Q Consensus 52 vIl~~sllg~~lPl~~~~---------~~~~~~~~~~l~l~~~FagGVfLataflHLLPea~E~~~~ 109 (144)
.+++.-++|+++.+...+ .+-++.++|--+.....-+|++++.+-+-.+--..|+..+
T Consensus 5 li~~l~~lgG~IA~~GD~iG~kvGKkrlslFgLRPr~Ta~lVti~TG~~Is~~tl~vl~~~s~~~R~ 71 (79)
T PF11283_consen 5 LILALLLLGGLIAYLGDRIGSKVGKKRLSLFGLRPRYTAILVTILTGVLISALTLGVLFLLSENVRT 71 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhcCCCccceeehHHHHhHHHHHHHHHHHHHHhHHHHH
Confidence 344555667777765322 2223456677778888899999999988888777776653
No 28
>PF07086 DUF1352: Protein of unknown function (DUF1352); InterPro: IPR009787 This family consists of several hypothetical eukaryotic proteins of around 190 residues in length. The function of this family is unknown.
Probab=22.85 E-value=3.9e+02 Score=21.18 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=27.4
Q ss_pred HHhhhhhhhccccCCCCChhHHHHHHHhhhhHH----HHHHhhhhhHHHHHhcCCC
Q 040032 59 IGVYLPVLGKTIPALSPERKIFFLIKAFAAGVI----LSTGFVHVLPDAFENLTSP 110 (144)
Q Consensus 59 lg~~lPl~~~~~~~~~~~~~~l~l~~~FagGVf----LataflHLLPea~E~~~~~ 110 (144)
+.+++|.++......|.+...+.+ -.+|.+++ +.-+..-.+||..+..++.
T Consensus 79 ~lS~ip~~~G~~s~~rN~i~~l~~-y~~~~~~~gl~pl~~g~~~~~~~~~~y~~~~ 133 (186)
T PF07086_consen 79 CLSLIPSLLGLLSLRRNNISLLRL-YMIGSSLFGLLPLIYGAMYYFPEVQQYYRHG 133 (186)
T ss_pred HHHHHHHHHHHHhcccchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 345556554433222333222222 12444444 5667778899999988764
No 29
>PHA00679 hypothetical protein
Probab=20.44 E-value=89 Score=20.56 Aligned_cols=16 Identities=31% Similarity=0.607 Sum_probs=13.1
Q ss_pred HHHHHhhhhHHHHHHh
Q 040032 81 FLIKAFAAGVILSTGF 96 (144)
Q Consensus 81 ~l~~~FagGVfLataf 96 (144)
-.+..+++||+|+.+.
T Consensus 4 yyltylaagvllglav 19 (71)
T PHA00679 4 YYLTYLAAGVLLGLAV 19 (71)
T ss_pred ehHHHHHHHHHHHHHH
Confidence 3567899999999875
Done!